BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036544
(439 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359476425|ref|XP_002263877.2| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
Length = 588
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 301/446 (67%), Positives = 358/446 (80%), Gaps = 13/446 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K VSVLL HSESKL+FVDYQS PL L +LSLFP ++ P VLI DD + S TV
Sbjct: 136 RLDAKTVSVLLRHSESKLIFVDYQSRPLILESLSLFPPSSQRPLLVLITDDEDSPPS-TV 194
Query: 65 ------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P FKW++PESEW+PM LNYTSGTTSSPKGVVHCHRG+FI+TV SLI
Sbjct: 195 DFLCTYEDMVGRGDPEFKWIRPESEWNPMILNYTSGTTSSPKGVVHCHRGIFIVTVDSLI 254
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
DW +P QPV+LWTLPMFH NGWS+ WGMAAVGGTN+CLRK D +IY I+ H VTH+CG
Sbjct: 255 DWCVPKQPVYLWTLPMFHANGWSFPWGMAAVGGTNVCLRKFDASVIYEAIRVHRVTHMCG 314
Query: 173 ALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
A VVLNMLS+ P T+PL PV+ILT+GA PPAA+LLRTES GF+VSH YGLTET G VVS
Sbjct: 315 APVVLNMLSNWPGTEPLKNPVQILTAGAPPPAAILLRTESRGFIVSHGYGLTETGGLVVS 374
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C WK +WN L TERARLK+RQGVRT+G+ ++DV+ P +G+SVK DG S GEIV R G I
Sbjct: 375 CVWKQKWNRLPATERARLKSRQGVRTVGMTEVDVLDPGSGLSVKRDGSSLGEIVLRGGCI 434
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
MLGYLKD +G+S + D+ WF+TGD+GV+HSDGYLEIKDRSKDVIISGGEN+SS EVESV
Sbjct: 435 MLGYLKDPKGTSKSLTDDGWFFTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESV 494
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+NE A+VA+ D FWG+ PCAFVSLK E +++PTE+ I+E+CRAR+PHYM K+V
Sbjct: 495 LYTHPAVNEAAVVARPDDFWGETPCAFVSLKPERTEQPTEKEIMEYCRARMPHYMVPKTV 554
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ E+ELPKT+TGKIQKFVLRE A+
Sbjct: 555 VFEEELPKTSTGKIQKFVLRETAKAM 580
>gi|255561466|ref|XP_002521743.1| AMP dependent ligase, putative [Ricinus communis]
gi|223538956|gb|EEF40553.1| AMP dependent ligase, putative [Ricinus communis]
Length = 556
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 298/456 (65%), Positives = 357/456 (78%), Gaps = 18/456 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD + VSVLL HS+SKL+FVD S L L A+SLFPS+ P VLI DD A +
Sbjct: 93 NINTRLDARTVSVLLRHSQSKLVFVDCLSRDLVLEAVSLFPSSVKRPTLVLITDDDEAPA 152
Query: 61 SPTV------------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRG 102
S + G P FKWVQP+SEWDPM LNYTSGTTSSPKGVVHCHRG
Sbjct: 153 SSSTSSSSTVDFCCTYESMVEKGDPEFKWVQPQSEWDPMILNYTSGTTSSPKGVVHCHRG 212
Query: 103 LFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
++IITV SLIDW +P QPV+LWTLP+FH NGWS+ WGMAAVGGTNIC+RK D IY +I
Sbjct: 213 IYIITVESLIDWNVPRQPVYLWTLPLFHANGWSFPWGMAAVGGTNICIRKFDASSIYGLI 272
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
K HGVTH+CGA VVLNML++SP +PL RPV ILT+GA PPAAVL RTESLGFVVSH YG
Sbjct: 273 KRHGVTHMCGAPVVLNMLTNSPDNEPLKRPVHILTAGAPPPAAVLFRTESLGFVVSHGYG 332
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTETAG VVSCAWK +WNT+ +ERARLKARQGVR G ++DV+ P+TG+SVK DG S
Sbjct: 333 LTETAGLVVSCAWKPKWNTVPASERARLKARQGVRIAGFTEIDVIDPKTGLSVKRDGLSL 392
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R G +M+GYLKD +G+S C++D+ WFYTGD+GV+H DGYLEIKDRSKDVIISGGE
Sbjct: 393 GEIVLRGGCVMMGYLKDPDGTSKCLKDDGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGE 452
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVESVLY NP +NE A+VA+ D++WG+ PCAFVSL+ +K +E+ IIE+CR +
Sbjct: 453 NISSVEVESVLYSNPVVNEAAVVARPDEYWGETPCAFVSLRDGAREKVSEKDIIEYCREK 512
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+PHYM K+V+ ++ELPKT+TGKIQKFVLR+I A+
Sbjct: 513 MPHYMVPKTVVFKEELPKTSTGKIQKFVLRDIAKAM 548
>gi|224127758|ref|XP_002329170.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222870951|gb|EEF08082.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 550
Score = 616 bits (1588), Expect = e-174, Method: Compositional matrix adjust.
Identities = 293/452 (64%), Positives = 350/452 (77%), Gaps = 14/452 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD + +S+LL HSESKL+FVD S + L A+SL P NT P VLI DD A
Sbjct: 93 NINTRLDARTMSILLRHSESKLVFVDCLSRDVILDAMSLLPPNTKRPPLVLIADDAEAAE 152
Query: 61 SPTV-------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
S G P FKWVQP SEWDPM LNYTSGTTSSPKGVVHCHR +F IT
Sbjct: 153 SSITDDFCCAYESMVEKGDPGFKWVQPHSEWDPMVLNYTSGTTSSPKGVVHCHRSVFTIT 212
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
V SLIDW +P QPV+LWTLP+FH NGWSY WG+AAVGGTNICLRK D P IYS+IK HGV
Sbjct: 213 VGSLIDWGVPKQPVYLWTLPIFHANGWSYPWGIAAVGGTNICLRKFDGPTIYSLIKRHGV 272
Query: 168 THICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
TH+CGA VVL ML++S + +PL P++ILT+GA PP+AVL RTESLGFVVSH YGLTETA
Sbjct: 273 THMCGAPVVLTMLTNSTNKEPLRNPIQILTAGAPPPSAVLFRTESLGFVVSHGYGLTETA 332
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G VVSCAWK +WNT +ERARLKARQGV+ +G ++DV+ PE+G SVK DG + GE+V
Sbjct: 333 GLVVSCAWKPKWNTFPPSERARLKARQGVKIVGFTEIDVLEPESGKSVKRDGVALGEVVL 392
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
+ G IMLGYLKD G+S CM+D WFYTGD+GV+H DGYLEIKDRSKDVIISGGENISS
Sbjct: 393 KGGCIMLGYLKDPTGTSKCMKDG-WFYTGDVGVMHQDGYLEIKDRSKDVIISGGENISSV 451
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
E+ESVLY +PA+NE A+VA+ D+FWG+ PCAFV LK L++KP E+ +I+FCR ++PHYM
Sbjct: 452 EIESVLYTHPAVNEAAVVARPDEFWGETPCAFVGLKDGLTQKPGEKDMIDFCREKMPHYM 511
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
K+V+ +DELPKT+TGKIQKFVLR I ++
Sbjct: 512 VPKTVVFKDELPKTSTGKIQKFVLRGIAKSMG 543
>gi|147800064|emb|CAN64147.1| hypothetical protein VITISV_042774 [Vitis vinifera]
Length = 537
Score = 610 bits (1574), Expect = e-172, Method: Compositional matrix adjust.
Identities = 290/435 (66%), Positives = 347/435 (79%), Gaps = 1/435 (0%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + VSVLL HSESKL+FVD S L L ALSLFP NT P VLI D+ A SS T
Sbjct: 97 RLDARTVSVLLRHSESKLVFVDCLSRALILEALSLFPPNTQWPLLVLIADEEVAPSS-TR 155
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
G P FKWV+PESEWDP+ LNYTSGTTSSPKGVVHCHRG+FI+T+ SL++W +P QPV+LW
Sbjct: 156 GDPEFKWVRPESEWDPIILNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLW 215
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSP 184
TLPMFH NGW+++WGMAAVGGTN+CLRK D IIY I +G+TH+C A VVLNMLS+ P
Sbjct: 216 TLPMFHGNGWTFTWGMAAVGGTNVCLRKFDARIIYDAIPKYGITHMCAAPVVLNMLSNYP 275
Query: 185 STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLAD 244
+ +PL PVKILT+GA PP +VLLRTESLGFVVSH YG+TETAG VVSCAWK QW+
Sbjct: 276 NHQPLGYPVKILTAGAPPPYSVLLRTESLGFVVSHGYGMTETAGVVVSCAWKPQWDRFPA 335
Query: 245 TERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
+ERAR+KARQGVRT+ + ++DVV P++G+SVK DG S GEIV R IMLGYLKD EG+S
Sbjct: 336 SERARVKARQGVRTVVMTEVDVVDPKSGVSVKRDGSSLGEIVLRGACIMLGYLKDPEGTS 395
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
CM W YTGD+ V+H DGY+EIKDRSKDVIISGGEN+SS EVESVLY +PA+NE A+
Sbjct: 396 KCMSKEGWLYTGDVAVMHPDGYIEIKDRSKDVIISGGENLSSVEVESVLYTHPAVNEAAV 455
Query: 365 VAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATG 424
VA+ D FWG+ PCAFVSLK KPT + ++E+CRAR+PHYM K+V+ ++ELPKT+TG
Sbjct: 456 VARPDDFWGETPCAFVSLKPGSPDKPTAKEMMEYCRARMPHYMVPKTVVFKEELPKTSTG 515
Query: 425 KIQKFVLREIVNAVN 439
KIQKF LR+I A+
Sbjct: 516 KIQKFKLRDIAKAMG 530
>gi|225466183|ref|XP_002263801.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
Length = 549
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 291/447 (65%), Positives = 349/447 (78%), Gaps = 13/447 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + VSVLL HSESKL+FVD S L L ALSLFP NT P VLI D+ A SS TV
Sbjct: 97 RLDARTVSVLLRHSESKLVFVDCLSRALILEALSLFPPNTQWPLLVLIADEEVAPSS-TV 155
Query: 65 ------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P FKWV+PESEWDP+ LNYTSGTTSSPKGVVHCHRG+FI+T+ SL+
Sbjct: 156 DFICTYEDLVERGDPEFKWVRPESEWDPIILNYTSGTTSSPKGVVHCHRGIFIVTIDSLV 215
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W +P QPV+LWTLPMFH NGW+++WGMAA+GGTN+CLRK D IIY I +G+TH+C
Sbjct: 216 EWSVPKQPVYLWTLPMFHGNGWTFTWGMAAIGGTNVCLRKFDARIIYDAIPKYGITHMCA 275
Query: 173 ALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
A VVLNMLS+ P+ +PL PVKILT+GA PP +VLLRTESLGFVVSH YG+TETAG VVS
Sbjct: 276 APVVLNMLSNYPNHQPLGDPVKILTAGAPPPYSVLLRTESLGFVVSHGYGMTETAGVVVS 335
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAWK QW+ +ERAR+KARQGVRT+ + ++DVV P++G+SVK DG S GEIV R I
Sbjct: 336 CAWKPQWDRFPASERARVKARQGVRTVVMTEVDVVDPKSGVSVKRDGSSLGEIVLRGACI 395
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
MLGYLKD EG+S CM W YTGD+ V+H DGY+EIKDRSKDVIISGGEN+SS EVESV
Sbjct: 396 MLGYLKDPEGTSKCMSKEGWLYTGDVAVMHPDGYIEIKDRSKDVIISGGENLSSVEVESV 455
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+NE A+VA+ D FWG+ PCAFVSLK E KPT + ++E+CRAR+PHYM K+V
Sbjct: 456 LYTHPAVNEAAVVARPDDFWGETPCAFVSLKPESPDKPTAKEMMEYCRARMPHYMVPKTV 515
Query: 413 IIEDELPKTATGKIQKFVLREIVNAVN 439
+ ++ELPKT+TGKIQKF LR+I A+
Sbjct: 516 VFKEELPKTSTGKIQKFKLRDIAKAMG 542
>gi|224134905|ref|XP_002321934.1| predicted protein [Populus trichocarpa]
gi|222868930|gb|EEF06061.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 294/445 (66%), Positives = 344/445 (77%), Gaps = 15/445 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--VSATSSP 62
RLD + +S+LL H+ESKLLFVD L A+SLFP NT P VLI DD VS SSP
Sbjct: 97 RLDARTISLLLCHAESKLLFVDPMYVSLVHEAISLFPPNTKHPPLVLIADDEVVSQQSSP 156
Query: 63 TV------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
T+ G P F W++P++++DP+ALNYTSGTT+SPKGVVHCHRGLFI+T+ S
Sbjct: 157 TIHFYDTYESLVEKGDPAFNWIRPKNDFDPIALNYTSGTTASPKGVVHCHRGLFIVTLDS 216
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
LIDW P QPVFLWTLPMFH NGWSY WGMAAVGGTNIC+RK D P IY +I+ H VTH+
Sbjct: 217 LIDWSFPKQPVFLWTLPMFHSNGWSYPWGMAAVGGTNICIRKFDAPTIYGLIEKHRVTHM 276
Query: 171 CGALVVLNMLSSSPST-KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
CGA VVLNMLS+SP+ KPL PV I+T+GA PPA +L RTESLGFVV H YGLTET G
Sbjct: 277 CGAPVVLNMLSNSPTIIKPLKNPVHIITAGAPPPATILSRTESLGFVVGHGYGLTETGGI 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
VVSCAWK QW+ TERARLKARQGVRTIG+ ++DVV P TG SVK DG + GEIV R
Sbjct: 337 VVSCAWKRQWSLFPATERARLKARQGVRTIGMNEVDVVDPITGTSVKRDGSTLGEIVLRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
G IMLGYLKD ++ CM +N WFYTGD+GV+H DGYLEIKDRSKDVIISGGEN+SS EV
Sbjct: 397 GCIMLGYLKDPVATAKCMTENGWFYTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
ESVLY P INE A+VA+ D+FWG+ PCAFV+LK K TE+ IIE+CRARLPHYM
Sbjct: 457 ESVLYTFPDINEAAVVARPDEFWGETPCAFVTLKEACCKSTTEKEIIEYCRARLPHYMVP 516
Query: 410 KSVIIEDELPKTATGKIQKFVLREI 434
K+V++ +ELPKTATGKIQK +LR++
Sbjct: 517 KTVVVTEELPKTATGKIQKALLRDM 541
>gi|224127933|ref|XP_002329213.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222870994|gb|EEF08125.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 548
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 287/453 (63%), Positives = 342/453 (75%), Gaps = 15/453 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD + +S+LL HSESKL+FVDY S + L ALSLFP T P VLI DD
Sbjct: 93 NINTRLDARTISILLRHSESKLVFVDYLSLDVILEALSLFPPETPCPALVLITDDEEEAP 152
Query: 61 SPTV--------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
P G P FKWVQP+SEWDP+ LNYTSGTTS+PKGVV HR F I
Sbjct: 153 PPPSLSVDFCTYESMVEKGDPEFKWVQPQSEWDPVVLNYTSGTTSAPKGVVQSHRATFTI 212
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
T+ SLIDW +P Q V+LWTLP+FH NGWSY+WGMAAVGGTNICLR+V+ P IYS+IK HG
Sbjct: 213 TIGSLIDWSLPKQAVYLWTLPIFHANGWSYAWGMAAVGGTNICLRRVEAPTIYSLIKRHG 272
Query: 167 VTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
VTH+CGA VVLNML++SP+ + L PV+ILT GA PP+AVL R ESLGFVVSH YGLTET
Sbjct: 273 VTHMCGAPVVLNMLTNSPNAERLQNPVQILTGGAPPPSAVLFRAESLGFVVSHGYGLTET 332
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
AG V SCAWK +WNT +ERA LK+RQGV +G +M VV P TG SV+ DG S GE+V
Sbjct: 333 AGLVTSCAWKPKWNTFPASERAILKSRQGVPFVGFTEMGVVDPNTGKSVERDGVSLGEVV 392
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
R GS+MLGY KD G+S+CM+D WFYTGD+GVVHSDGYLE+KDRSKDVIISGGENISS
Sbjct: 393 LRGGSVMLGYFKDPLGTSMCMKDG-WFYTGDVGVVHSDGYLEVKDRSKDVIISGGENISS 451
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
E+ESVLY +PA+NE A+VA+ D+FWG+ PCAFVSLK L KP E+ II++CR ++ HY
Sbjct: 452 VEIESVLYTHPAVNEAAVVARPDEFWGETPCAFVSLKHGLPHKPGEKDIIDYCREKMAHY 511
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
M K V+ +DELPKT+TGKIQK++LRE V+
Sbjct: 512 MVPKIVVFKDELPKTSTGKIQKYLLREYAKVVD 544
>gi|224118022|ref|XP_002331538.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222873762|gb|EEF10893.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 554
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 290/450 (64%), Positives = 343/450 (76%), Gaps = 16/450 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD---VSATSS 61
RLD + +S+LL H+ES+LLFVD S L A+SL PS+ P VLI DD + S
Sbjct: 97 RLDARTISLLLCHAESELLFVDLMSVSLVNEAISLLPSSAKPPLLVLIADDDEVLPQQPS 156
Query: 62 PTV------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
PT+ G P F W +P++++DP+ LNYTSGTTSSPKGVVHCHRGLFI+T+
Sbjct: 157 PTIHFYDTYEGLLEKGDPAFNWTRPKNDFDPIVLNYTSGTTSSPKGVVHCHRGLFIVTLD 216
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
SL+DW P QPVFLWTLPMFH NGWSY WGMAAVGGTNICLRK D P IY +IK HGVTH
Sbjct: 217 SLVDWSFPKQPVFLWTLPMFHSNGWSYPWGMAAVGGTNICLRKFDAPTIYGLIKKHGVTH 276
Query: 170 ICGALVVLNMLSSSPST-KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
+CGA VVLNMLS+SP T +PL PV I+T+GA PPA +L RTESLGFVV H YGLTET G
Sbjct: 277 MCGAPVVLNMLSNSPITMEPLKNPVHIITAGAPPPATILSRTESLGFVVGHGYGLTETGG 336
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
VVSCAWK QWN TERARLKARQGVRT+G+ ++DVV P TGMSVK DG + GEIV R
Sbjct: 337 IVVSCAWKRQWNLFPATERARLKARQGVRTVGMTEVDVVDPVTGMSVKRDGLTLGEIVLR 396
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
G IMLGYLKD ++ CM +N WF TGD+GV+H DGYLEIKDRSKDVIISGGEN+SS E
Sbjct: 397 GGCIMLGYLKDPVATAKCMTENGWFCTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSVE 456
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VESVLY P INE A+VA+ D+FWG+ PCAFVSLK + PTE+ IIE CR +LPHYM
Sbjct: 457 VESVLYTFPDINEAAVVARPDEFWGETPCAFVSLKEACCRIPTEKEIIEHCRGKLPHYMV 516
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAV 438
K+V+++++LPKT+TGKIQK VLR++ A+
Sbjct: 517 PKTVVVKEKLPKTSTGKIQKAVLRDMAKAM 546
>gi|297811775|ref|XP_002873771.1| hypothetical protein ARALYDRAFT_488489 [Arabidopsis lyrata subsp.
lyrata]
gi|297319608|gb|EFH50030.1| hypothetical protein ARALYDRAFT_488489 [Arabidopsis lyrata subsp.
lyrata]
Length = 552
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 279/450 (62%), Positives = 346/450 (76%), Gaps = 19/450 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD + VSVLL H SKLLFVD S LA+ A+S+ ++ P V I D
Sbjct: 94 NINTRLDARTVSVLLRHCGSKLLFVDVFSVDLAVKAISMMTTDP--PILVFIADKEEEGG 151
Query: 61 SPTV----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
V G P FKW++PESEWDP+ LNYTSGTTS+PKGVVHCHRG+F
Sbjct: 152 DADVADRTKFNYTYDDLIQRGDPGFKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIF 211
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
++++ SLIDW +P PV+LWTLP+FH NGWSY WG+AAVGGTN+CLRK D P+IY +I+
Sbjct: 212 VMSIDSLIDWTVPKNPVYLWTLPIFHANGWSYPWGIAAVGGTNVCLRKFDAPLIYRLIRE 271
Query: 165 HGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
HGVTH+CGA VVLNMLS++ ++PL+RPV ILT+GA PPAAVLLR ES+GFV+SH YGLT
Sbjct: 272 HGVTHMCGAPVVLNMLSATQESQPLNRPVNILTAGAPPPAAVLLRAESIGFVISHGYGLT 331
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ETAG VSCAWK QWN L ++RARLKARQGVRT+G ++DVV E+G+SV+ +G++ GE
Sbjct: 332 ETAGLNVSCAWKPQWNRLPASDRARLKARQGVRTVGFTEIDVVDTESGLSVERNGETVGE 391
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
IV R SIMLGYLKD G+ ++ N WFYTGD+GV+HSDGYLEIKDRSKD+II+GGEN+
Sbjct: 392 IVMRGSSIMLGYLKDPIGTEKALK-NGWFYTGDVGVIHSDGYLEIKDRSKDIIITGGENV 450
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE+VLY NPA++EVA+VA+ D FWG+ PCAFVSLK LS++PTEE +IE+CR ++P
Sbjct: 451 SSVEVEAVLYTNPAVSEVAVVARPDAFWGETPCAFVSLKSGLSRRPTEEELIEYCRKKMP 510
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREI 434
YM K+V DELPKT+TGK+ KFVLREI
Sbjct: 511 RYMVPKTVSFVDELPKTSTGKVMKFVLREI 540
>gi|356500978|ref|XP_003519307.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 549
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 288/449 (64%), Positives = 348/449 (77%), Gaps = 19/449 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN-TILPKPVLIHDDVSAT 59
N+ RLD + VSV+L H+ S L+FVD S L L ALSLFP N + P +LI D+
Sbjct: 93 NINTRLDARTVSVILRHANSTLVFVDCASRDLVLEALSLFPENQSQRPTLILITDETIEK 152
Query: 60 SSPTV------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
+SPTV G P FKWV P SEWDP+ LNYTSGTTSSPKGVVHCHRG FI+
Sbjct: 153 ASPTVDFLDTYEGLVSKGDPGFKWVLPNSEWDPIVLNYTSGTTSSPKGVVHCHRGTFIVA 212
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
V SLIDW +P PV+LWTLPMFH NGWS+ +G+AAVGGTNIC+RK D I+YS+IK H V
Sbjct: 213 VDSLIDWAVPKNPVYLWTLPMFHANGWSFPYGIAAVGGTNICVRKFDAEIVYSLIKRHHV 272
Query: 168 THICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
TH+CGA VVLNML+++ S PL++PV+ILT+GA PPAAVL RTE+LGFVVSH YGLTET
Sbjct: 273 THMCGAPVVLNMLTNANS--PLEKPVQILTAGAPPPAAVLFRTEALGFVVSHGYGLTETG 330
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G VVSCAWK +WN L TERARLKARQGVRT+ +A++DVV P TG SVK DG S GE+V
Sbjct: 331 GLVVSCAWKGEWNKLPATERARLKARQGVRTVAMAEVDVVGP-TGESVKRDGVSIGEVVM 389
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
+ G +MLGYLKD G++ C + N WFYTGD+GV+H DGYLEIKDRSKDVIISGGEN+SS
Sbjct: 390 KGGCVMLGYLKDPSGTASCFK-NGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSV 448
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWEL--SKKPTEEAIIEFCRARLPH 405
EVES+LY +PA+NE A+VA+ ++WG+ PCAFVSLK + +KPTE+ IIE+CR +PH
Sbjct: 449 EVESILYGHPAVNEAAVVARPHEYWGETPCAFVSLKKGIKEKEKPTEKDIIEYCRDNMPH 508
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLREI 434
YM K+V+ +DELPKT+TGKIQKFVLR+I
Sbjct: 509 YMVPKTVVFKDELPKTSTGKIQKFVLRQI 537
>gi|224126537|ref|XP_002319862.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222858238|gb|EEE95785.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 540
Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust.
Identities = 283/450 (62%), Positives = 345/450 (76%), Gaps = 18/450 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD + V +LL HSESKL+FVDY S L L A+SLFP++ P + D S++S
Sbjct: 93 NINTRLDARNVCILLRHSESKLVFVDYLSRELILEAVSLFPTDNKTP-----YTDQSSSS 147
Query: 61 SPT------------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
S T G+P FKWVQP+SEWDP+ LNYTSGTTSSPKGVV HRG+FI++
Sbjct: 148 SLTGHFSCSYEDMVEKGNPGFKWVQPQSEWDPVVLNYTSGTTSSPKGVVQSHRGIFIVSA 207
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
++LIDW +P QPV+LW LP+FH NGWS+ WGMAAVGGTNICLRKV+ IYS+I HGVT
Sbjct: 208 AALIDWGVPKQPVYLWALPIFHTNGWSHVWGMAAVGGTNICLRKVEASTIYSLIDRHGVT 267
Query: 169 HICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
H+ GA VVLN+L+ SP +PL PV I+T+GA PPAAV+LRTESLGFVVSH YGLTETAG
Sbjct: 268 HMSGAPVVLNILTKSPDVEPLKNPVHIITAGAPPPAAVILRTESLGFVVSHGYGLTETAG 327
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
VVSCAWK +WNT +ERARLKARQGV G +MDVV P TG S++ DG S GE+V R
Sbjct: 328 LVVSCAWKPKWNTFPASERARLKARQGVTMAGFTEMDVVDPRTGESMRRDGVSVGEVVLR 387
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
G +MLGYLKD G+S CM+D WFYTGD+G++H DGYLEIKDRSKDVIISGGENISS E
Sbjct: 388 GGCLMLGYLKDPLGTSKCMKDG-WFYTGDVGIMHQDGYLEIKDRSKDVIISGGENISSVE 446
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VESVLY +PA++E A+V + D+FWG+ PCAFV LK L+ KP E+ II+FCR +PH+M
Sbjct: 447 VESVLYTHPAVHEAAVVGRPDEFWGETPCAFVDLKDGLNHKPCEKDIIDFCRNNMPHFMV 506
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAV 438
K+V+ +DELP+T+TGKIQKFVL+EI +
Sbjct: 507 PKTVVFKDELPRTSTGKIQKFVLKEIAKGM 536
>gi|15237335|ref|NP_197141.1| acyl activating enzyme 5 [Arabidopsis thaliana]
gi|75309026|sp|Q9FFE6.1|AAE5_ARATH RecName: Full=Probable acyl-activating enzyme 5, peroxisomal;
AltName: Full=AMP-binding protein 5; Short=AtAMPBP5
gi|20799719|gb|AAM28622.1|AF503764_1 adenosine monophosphate binding protein 5 AMPBP5 [Arabidopsis
thaliana]
gi|9759119|dbj|BAB09604.1| AMP-binding protein [Arabidopsis thaliana]
gi|332004901|gb|AED92284.1| acyl activating enzyme 5 [Arabidopsis thaliana]
Length = 552
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 278/450 (61%), Positives = 344/450 (76%), Gaps = 19/450 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD + VSVLL H SKLLFVD S LA+ A+S+ ++ P V I D
Sbjct: 94 NINTRLDARTVSVLLRHCGSKLLFVDVFSVDLAVEAISMMTTDP--PILVFIADKEEEGG 151
Query: 61 SPTV----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
V G +FKW++PESEWDP+ LNYTSGTTS+PKGVVHCHRG+F
Sbjct: 152 DADVADRTKFSYTYDDLIHRGDLDFKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIF 211
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
++++ SLIDW +P PV+LWTLP+FH NGWSY WG+AAVGGTN+CLRK D P+IY +I+
Sbjct: 212 VMSIDSLIDWTVPKNPVYLWTLPIFHANGWSYPWGIAAVGGTNVCLRKFDAPLIYRLIRD 271
Query: 165 HGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
HGVTH+CGA VVLNMLS++ +PL+RPV ILT+GA PPAAVLLR ES+GFV+SH YGLT
Sbjct: 272 HGVTHMCGAPVVLNMLSATNEFQPLNRPVNILTAGAPPPAAVLLRAESIGFVISHGYGLT 331
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ETAG VSCAWK QWN L ++RARLKARQGVRT+G ++DVV PE+G SV+ +G++ GE
Sbjct: 332 ETAGLNVSCAWKPQWNRLPASDRARLKARQGVRTVGFTEIDVVDPESGRSVERNGETVGE 391
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
IV R SIMLGYLKD G+ ++ N WFYTGD+GV+HSDGYLEIKDRSKD+II+GGEN+
Sbjct: 392 IVMRGSSIMLGYLKDPVGTEKALK-NGWFYTGDVGVIHSDGYLEIKDRSKDIIITGGENV 450
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE+VLY NPA+NEVA+VA+ D FWG+ PCAFVSLK L+++PTE +IE+CR ++P
Sbjct: 451 SSVEVETVLYTNPAVNEVAVVARPDVFWGETPCAFVSLKSGLTQRPTEVEMIEYCRKKMP 510
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREI 434
YM K+V DELPKT+TGK+ KFVLREI
Sbjct: 511 KYMVPKTVSFVDELPKTSTGKVMKFVLREI 540
>gi|357491645|ref|XP_003616110.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355517445|gb|AES99068.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 563
Score = 583 bits (1503), Expect = e-164, Method: Compositional matrix adjust.
Identities = 279/457 (61%), Positives = 344/457 (75%), Gaps = 20/457 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLDHK +SVLL HSESKL+FVD S L L ALSLFP+N PK VLI D+ A +
Sbjct: 93 NLNFRLDHKSLSVLLIHSESKLIFVDILSLSLTLNALSLFPTNIQQPKLVLIMDETLAPN 152
Query: 61 S-----------------PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGL 103
T G PNFKW+QP SEWDP+ LNYTSGTTSSPKGVVHCHR
Sbjct: 153 QIPPLPKNVNIINTYEGLVTKGDPNFKWIQPNSEWDPITLNYTSGTTSSPKGVVHCHRAT 212
Query: 104 FIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
FI+++ SL+DW +P QPVFLWTLPMFH NGWSY W MAAVGG NIC R++D P IY +I+
Sbjct: 213 FIVSLDSLVDWSVPVQPVFLWTLPMFHSNGWSYPWAMAAVGGINICARRIDAPTIYRLIE 272
Query: 164 HHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
HGVTH+C A VVLNMLSS T+PL +PV +LT G+SPPA +L R E LGF VSH YG+
Sbjct: 273 SHGVTHMCAAPVVLNMLSSFNKTEPLKKPVHVLTGGSSPPATILCRAELLGFEVSHGYGM 332
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TET G +VSCAWK +W+ TERAR+KARQGVR +G+A++DVV P TG SVK+DG + G
Sbjct: 333 TETCGVIVSCAWKREWDRFPATERARMKARQGVRRVGVAEVDVVGP-TGESVKNDGVTVG 391
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV + +MLGYLKD+ + CMR + WFYTGD+GV+H +GY+EIKDR+KDVIISGGEN
Sbjct: 392 EIVVKGACVMLGYLKDEYATWQCMRKDGWFYTGDVGVIHKNGYMEIKDRTKDVIISGGEN 451
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKK--PTEEAIIEFCRA 401
+SS EVE+VLYM+PA+ E A+VA+ D+FWG+ PCAFVSL EL ++ PTE+ + EFCR
Sbjct: 452 MSSVEVEAVLYMHPAVKEAAVVARPDEFWGETPCAFVSLNDELKEEEIPTEKEVKEFCRE 511
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+LPH+M K+V+ ++ELPKT+TGKIQK VLR + A+
Sbjct: 512 KLPHFMVPKTVVFKEELPKTSTGKIQKHVLRRVARAM 548
>gi|357491647|ref|XP_003616111.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355517446|gb|AES99069.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 562
Score = 583 bits (1502), Expect = e-164, Method: Compositional matrix adjust.
Identities = 285/453 (62%), Positives = 341/453 (75%), Gaps = 21/453 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT- 59
N+ RLD + +S +L H ESKL+FVD + L L ALSLFPS P +LI D T
Sbjct: 93 NINTRLDARIISNILLHCESKLVFVDIAARDLVLQALSLFPSKQHKPLLILIKDQTFETY 152
Query: 60 ----SSPTV------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGL 103
SS TV G PNF WV P SEWDPM LNYTSGTTSSPKGVVH HRG
Sbjct: 153 ENVSSSSTVDFISTYEDLMASGDPNFNWVYPNSEWDPMLLNYTSGTTSSPKGVVHSHRGA 212
Query: 104 FIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
FI+TV +LI+W +P QP++LWTLPMFH NGWS+ WG+AAVGGTNIC+RK D I++S+I+
Sbjct: 213 FIVTVDTLIEWTVPKQPIYLWTLPMFHANGWSFPWGIAAVGGTNICVRKFDAEIVFSLIR 272
Query: 164 HHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
H VTH+CGA VVLNML++SP KPL + V ILT+GA PPAAVL RTE+LGF VSH YGL
Sbjct: 273 KHHVTHMCGAPVVLNMLTNSPDNKPLQKTVHILTAGAPPPAAVLHRTEALGFTVSHGYGL 332
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TET G VV C WK +WN L TERARLK+RQGVRT+G+ +DVV P +G SVK DG + G
Sbjct: 333 TETGGLVVCCTWKKKWNLLPATERARLKSRQGVRTLGMTKVDVVGP-SGESVKRDGATLG 391
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
E+V R G +MLGYLKD EG+ C + WFYTGD+GV+H DGYLEIKDRSKDVIISGGEN
Sbjct: 392 EVVMRGGCVMLGYLKDSEGTKNCFKKG-WFYTGDVGVMHEDGYLEIKDRSKDVIISGGEN 450
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKK--PTEEAIIEFCRA 401
+SS EVESVLY +PA+NE A+VA+ D+FWG+ PCAFVSLK L ++ PTE+ I+E+CR
Sbjct: 451 LSSVEVESVLYGHPAVNEAAVVAREDEFWGETPCAFVSLKEGLKERDIPTEKEIVEYCRK 510
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
LPHYM K+V+ +DELPKT+TGKIQKFVLR+I
Sbjct: 511 NLPHYMVPKTVVFKDELPKTSTGKIQKFVLRQI 543
>gi|356553214|ref|XP_003544953.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 554
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 292/452 (64%), Positives = 349/452 (77%), Gaps = 20/452 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN-TILPKPVLIHDDV--S 57
N+ RLD + VSV+L H+ S+L+FVD S L L ALSLFP N P +LI D+
Sbjct: 93 NINTRLDARTVSVILRHANSRLVFVDCASRDLVLEALSLFPENQNQRPTLILITDETVEK 152
Query: 58 ATSSPTV-------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
++P V G P FKWV P SEWDPM LNYTSGTTSSPKGVVHCHRG F
Sbjct: 153 EKAAPAVDNFLDTYEGLVSKGDPGFKWVLPNSEWDPMVLNYTSGTTSSPKGVVHCHRGTF 212
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
II+V +LIDW +P PV+LWTLPMFH NGWS+ +G+AAVGGTNIC+RK D I+YS+IK
Sbjct: 213 IISVDTLIDWAVPKNPVYLWTLPMFHANGWSFPYGIAAVGGTNICVRKFDAEIVYSLIKR 272
Query: 165 HGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
H VTH+CGA VVLNML++SP KPL++PV+ILT+GA PPAAVL RTE+LGFVVSH YGLT
Sbjct: 273 HHVTHMCGAPVVLNMLTNSPDNKPLEKPVQILTAGAPPPAAVLFRTEALGFVVSHGYGLT 332
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G VVSCAWK +WN L TERARLKARQGVRT G+A++DVV P TG SVK DG S GE
Sbjct: 333 ETGGLVVSCAWKGEWNKLPATERARLKARQGVRTAGMAEVDVVGP-TGESVKRDGVSIGE 391
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
+V R G +MLGYLKD G++ C + N WFYTGD+GV+H DGYLEIKDRSKDVIISGGEN+
Sbjct: 392 VVMRGGCVMLGYLKDPSGTASCFK-NGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENL 450
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK--WELSKKPTEEAIIEFCRAR 402
SS EVESVLY +PA+NE A+VA+ ++WG+ PCAFVSLK + +KPTE+ IIE+CR
Sbjct: 451 SSVEVESVLYGHPAVNEAAVVARPHEYWGETPCAFVSLKREIKEKEKPTEKEIIEYCRDN 510
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
+PHYM ++VI +DELPKT+TGKIQKFVLR+I
Sbjct: 511 MPHYMVPRTVIFKDELPKTSTGKIQKFVLRQI 542
>gi|255569837|ref|XP_002525882.1| AMP dependent ligase, putative [Ricinus communis]
gi|223534796|gb|EEF36486.1| AMP dependent ligase, putative [Ricinus communis]
Length = 480
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 292/465 (62%), Positives = 337/465 (72%), Gaps = 27/465 (5%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDV---- 56
N+ RLD + VS+LL HSESKLLFVD S L ALSLFP + P VLI DDV
Sbjct: 8 NLNTRLDARTVSILLRHSESKLLFVDVLSKALVSEALSLFPPDIRPPALVLIADDVVSDP 67
Query: 57 -SATSSPTV----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
+A+SS G P+FKWV PE+EWDP+ LNYTSGTTS+PKGVVHCHRG FI
Sbjct: 68 LNASSSVEFVDTYEGLMLKGDPHFKWVMPENEWDPLVLNYTSGTTSAPKGVVHCHRGFFI 127
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
TV SLIDW +P QPVFLWTLPMFH NGWSY WGMAAVGG NICLRK D IY +I H
Sbjct: 128 TTVDSLIDWSVPKQPVFLWTLPMFHSNGWSYPWGMAAVGGINICLRKFDASTIYRLIIKH 187
Query: 166 GVTHICGALVVLNMLSSSPSTKPLDRPVK-----ILTSGASPPAAVLLRTESLGFVVSHS 220
VTH+CGA VVLNML++ P +K +LT+GA PPAA+L R E+LGF VSH
Sbjct: 188 EVTHMCGAPVVLNMLANFPIDNKTQNILKTNQIHVLTAGAPPPAAILTRAEALGFKVSHG 247
Query: 221 YGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQ 280
YGLTE+ G V+SCAWK WN TERARLKARQGVRTIG+ MDVV P TG SVK DG
Sbjct: 248 YGLTESGGIVISCAWKQMWNRFPATERARLKARQGVRTIGVTKMDVVDPVTGESVKRDGL 307
Query: 281 SQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISG 340
SQGEIV R G +MLGYLKD +S CM W YTGD+ V+H DGYLEIKDRSKDVIISG
Sbjct: 308 SQGEIVLRGGCVMLGYLKDPVSTSKCMTSEGWLYTGDVAVMHPDGYLEIKDRSKDVIISG 367
Query: 341 GENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK-------WELSKKPTEE 393
GEN+SS EVESVLYMNP INE A+VA+ D++WG+ PCAFVSL+ +LS E+
Sbjct: 368 GENLSSVEVESVLYMNPIINEAAVVARPDEYWGETPCAFVSLRKSGGSSGGDLSPVAMEK 427
Query: 394 AIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
IIE+CRARLPHYM K+V+++DELPKT+TGKIQK VLR++ A+
Sbjct: 428 EIIEYCRARLPHYMVPKTVVVKDELPKTSTGKIQKSVLRDMAKAM 472
>gi|18491217|gb|AAL69511.1| putative AMP-binding protein [Arabidopsis thaliana]
Length = 549
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/450 (60%), Positives = 349/450 (77%), Gaps = 19/450 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD------ 54
N+ RLD + VSVLL H ESKLLFVD S LA+ A+S+ ++ P V+I D
Sbjct: 93 NINTRLDARTVSVLLRHCESKLLFVDVFSVDLAVEAVSMMTTDP--PILVVIADKEEEGG 150
Query: 55 --DVSATSSPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
DV+ S + G P FKW++PESEWDP+ LNYTSGTTS+PKGVVHCHRG+F
Sbjct: 151 VADVADLSKFSYTYDDLIERGDPGFKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIF 210
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+++V SLIDW +P PV+LWTLP+FH NGW+ WG+AAVGGTN+CLRK D P+IY +I+
Sbjct: 211 VMSVDSLIDWAVPKNPVYLWTLPIFHSNGWTNPWGIAAVGGTNVCLRKFDAPLIYRLIRD 270
Query: 165 HGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
HGVTH+CGA VVLNMLS++ ++PL+ PV ILT+G+ PPA VLLR ES+GFV+SH YGLT
Sbjct: 271 HGVTHMCGAPVVLNMLSATQESQPLNHPVNILTAGSPPPATVLLRAESIGFVISHGYGLT 330
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ETAG +VSCAWK +WN L ++RARLKARQGVRT+G ++DVV PE+G+SV+ +G++ GE
Sbjct: 331 ETAGVIVSCAWKPKWNHLPASDRARLKARQGVRTVGFTEIDVVDPESGLSVERNGETVGE 390
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
IV R S+MLGYLKD G+ ++ N WFYTGD+GV+HSDGYLEIKDRSKD+II+GGEN+
Sbjct: 391 IVMRGSSVMLGYLKDPVGTEKALK-NGWFYTGDVGVIHSDGYLEIKDRSKDIIITGGENV 449
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE+VLY PA+NEVA+VA+ D+FWG+ PCAFVSLK S KPTEE ++E+CR ++P
Sbjct: 450 SSVEVETVLYTIPAVNEVAVVARPDEFWGETPCAFVSLKNGFSGKPTEEELMEYCRKKMP 509
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREI 434
YM K+V DELPK++TGK+ KFVLR+I
Sbjct: 510 KYMVPKTVSFMDELPKSSTGKVTKFVLRDI 539
>gi|15237328|ref|NP_197138.1| AMP-binding protein 6 [Arabidopsis thaliana]
gi|75309027|sp|Q9FFE9.1|AAE6_ARATH RecName: Full=Probable acyl-activating enzyme 6; AltName:
Full=AMP-binding protein 6; Short=AtAMPBP6
gi|20799721|gb|AAM28623.1|AF503765_1 adenosine monophosphate binding protein 6 AMPBP6 [Arabidopsis
thaliana]
gi|9759116|dbj|BAB09601.1| AMP-binding protein [Arabidopsis thaliana]
gi|332004898|gb|AED92281.1| AMP-binding protein 6 [Arabidopsis thaliana]
Length = 550
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 274/450 (60%), Positives = 349/450 (77%), Gaps = 19/450 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD------ 54
N+ RLD + VSVLL H ESKLLFVD S LA+ A+S+ ++ P V+I D
Sbjct: 94 NINTRLDARTVSVLLRHCESKLLFVDVFSVDLAVEAVSMMTTDP--PILVVIADKEEEGG 151
Query: 55 --DVSATSSPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
DV+ S + G P FKW++PESEWDP+ LNYTSGTTS+PKGVVHCHRG+F
Sbjct: 152 VADVADLSKFSYTYDDLIERGDPGFKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIF 211
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+++V SLIDW +P PV+LWTLP+FH NGW+ WG+AAVGGTN+CLRK D P+IY +I+
Sbjct: 212 VMSVDSLIDWAVPKNPVYLWTLPIFHSNGWTNPWGIAAVGGTNVCLRKFDAPLIYRLIRD 271
Query: 165 HGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
HGVTH+CGA VVLNMLS++ ++PL+ PV ILT+G+ PPA VLLR ES+GFV+SH YGLT
Sbjct: 272 HGVTHMCGAPVVLNMLSATQESQPLNHPVNILTAGSPPPATVLLRAESIGFVISHGYGLT 331
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ETAG +VSCAWK +WN L ++RARLKARQGVRT+G ++DVV PE+G+SV+ +G++ GE
Sbjct: 332 ETAGVIVSCAWKPKWNHLPASDRARLKARQGVRTVGFTEIDVVDPESGLSVERNGETVGE 391
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
IV R S+MLGYLKD G+ ++ N WFYTGD+GV+HSDGYLEIKDRSKD+II+GGEN+
Sbjct: 392 IVMRGSSVMLGYLKDPVGTEKALK-NGWFYTGDVGVIHSDGYLEIKDRSKDIIITGGENV 450
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE+VLY PA+NEVA+VA+ D+FWG+ PCAFVSLK S KPTEE ++E+CR ++P
Sbjct: 451 SSVEVETVLYTIPAVNEVAVVARPDEFWGETPCAFVSLKNGFSGKPTEEELMEYCRKKMP 510
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREI 434
YM K+V DELPK++TGK+ KFVLR+I
Sbjct: 511 KYMVPKTVSFMDELPKSSTGKVTKFVLRDI 540
>gi|449462358|ref|XP_004148908.1| PREDICTED: probable acyl-activating enzyme 5, peroxisomal-like
[Cucumis sativus]
Length = 557
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 273/448 (60%), Positives = 342/448 (76%), Gaps = 19/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS--P 62
RLD + +S+LL HSESKL+FVD S L AL+LFP + P VLI DD + S P
Sbjct: 97 RLDTRTISILLRHSESKLIFVDQPSCALIFDALALFPPDMKRPLLVLITDDTAEQDSSLP 156
Query: 63 TV-----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
+V G F+W++P SEWDP+ LNYTSGTTS+PKGVV+CHRG+F
Sbjct: 157 SVVSIRDNFVDSYENMVKSGDSKFQWIRPLSEWDPIVLNYTSGTTSAPKGVVNCHRGVFT 216
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ + S+++W +P Q V+LWTLPMFH NGWS+ WG+AAVGGTN+C+RK D +I+S+I+ H
Sbjct: 217 VALDSILEWGVPKQSVYLWTLPMFHGNGWSFPWGIAAVGGTNVCIRKFDSRLIFSLIRRH 276
Query: 166 GVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
VTH+CGA VVLNML++SP PLDRPVKILT+GA PPA+VLLRTESLGFVV+H YGLTE
Sbjct: 277 HVTHLCGAPVVLNMLTNSPDNLPLDRPVKILTAGAPPPASVLLRTESLGFVVTHGYGLTE 336
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
+AG ++ C+WKS+WN L E+ARLKARQGVR + + +DV+ PET SVK DG S GEI
Sbjct: 337 SAGTIICCSWKSEWNQLPAIEQARLKARQGVRMLAVEAVDVLDPETRKSVKRDGASIGEI 396
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
V R S+MLGYLKD E +S M ++ WF+TGD+GV+H DGY+EIKDRSKDVIISGGEN+S
Sbjct: 397 VVRGPSLMLGYLKDTEATSKAMSEDGWFFTGDVGVMHPDGYIEIKDRSKDVIISGGENLS 456
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPH 405
S EVESVLYMNP +NE A+VA+ D+FWG+ PCAF+SLK LS+KPTEE IIE+C+ +LP
Sbjct: 457 SVEVESVLYMNPMVNEAAVVARPDEFWGETPCAFISLKEGLSRKPTEEEIIEYCKGKLPK 516
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLRE 433
+M K+VI E+PKTATGK QKFVLR+
Sbjct: 517 FMVPKTVIFMTEMPKTATGKFQKFVLRQ 544
>gi|449462360|ref|XP_004148909.1| PREDICTED: probable acyl-activating enzyme 5, peroxisomal-like
[Cucumis sativus]
Length = 576
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 272/452 (60%), Positives = 338/452 (74%), Gaps = 17/452 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + +SV L HSESKLLFVD SS L AL+LFP P VLI DD + S +
Sbjct: 118 RLDARTISVQLRHSESKLLFVDQASSGLISDALALFPPEAKRPLLVLISDDAAVEDSASS 177
Query: 65 -----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
G P F+W++P SEWDP+ +NYTSGTTSSPKGVVH HRG+F +T
Sbjct: 178 VAIGGDVVDLYEDMVQKGDPEFRWIRPVSEWDPIVMNYTSGTTSSPKGVVHSHRGIFTVT 237
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+ SLI+W +P V+LWTLPMFH NGWS+ + +AAVGGTNIC+RK D +I+S+I H V
Sbjct: 238 LDSLIEWGVPKHSVYLWTLPMFHANGWSFPFAIAAVGGTNICIRKFDAALIFSLINRHHV 297
Query: 168 THICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
TH+CGA VVLNML++SP+ +PL+RPVKILT+GA PPAAVLLRTESLGF VSH YGLTET
Sbjct: 298 THMCGAPVVLNMLTNSPNNRPLERPVKILTAGAPPPAAVLLRTESLGFDVSHGYGLTETG 357
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G V+ C+WK +WN L TERARLKARQGVRT+ +A+ DV+ TG V+ DG S GEIV
Sbjct: 358 GLVIFCSWKLEWNQLPATERARLKARQGVRTLAMAEADVLDSGTGKRVQRDGVSIGEIVI 417
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R GS+MLGY KD E + M + WF+TGD+GV+H DGYLEIKDRSKDVIISGGEN+SS
Sbjct: 418 RGGSMMLGYFKDPEATKKAMTEEGWFFTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSV 477
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVESVLY NPA+NE A+VA+ D+FWG+ PCAFVSL+ L++ PTEE IIE+C+ +L +M
Sbjct: 478 EVESVLYTNPAVNEAAVVARPDEFWGETPCAFVSLREGLTRVPTEEEIIEYCKGKLAGFM 537
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
K+V+ ++LPKT+TGKIQKF+LRE+ ++
Sbjct: 538 VPKTVVFMEQLPKTSTGKIQKFLLREMAKSMG 569
>gi|255562407|ref|XP_002522210.1| AMP dependent ligase, putative [Ricinus communis]
gi|223538581|gb|EEF40185.1| AMP dependent ligase, putative [Ricinus communis]
Length = 562
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 286/459 (62%), Positives = 340/459 (74%), Gaps = 26/459 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + +SVLL H ES+LLFVD L L A++LFP + P VL+ DD SSP +
Sbjct: 97 RLDARTISVLLQHGESELLFVDNLCVSLVLDAIALFPPDAKPPALVLVADD-EVNSSPAI 155
Query: 65 -------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P+FKWV+P SEWDP+ LNYTSGTTSSPKGVVHCHRG FI ++ L
Sbjct: 156 DQFIDTYEGLVIKGDPSFKWVRPISEWDPIVLNYTSGTTSSPKGVVHCHRGSFISAINGL 215
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
IDW +PNQPVFLWTLPMFH NGW+Y W +A VGG NICLRK D P IY +IK H VTH+C
Sbjct: 216 IDWFVPNQPVFLWTLPMFHSNGWNYPWSLAVVGGVNICLRKFDGPTIYRLIKKHNVTHMC 275
Query: 172 GALVVLNMLSS--SPS-----TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
A VVLNMLS+ SP+ T L PV ILT+GA PPA+VL RTESLGF+VSH YG+T
Sbjct: 276 AAPVVLNMLSNNYSPTDDNSQTPTLKNPVHILTAGAPPPASVLSRTESLGFIVSHGYGMT 335
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G VVSCAWKS+WN TERARLKARQGVRTIG+ ++DV+ PETG SVK DG S GE
Sbjct: 336 ETGGTVVSCAWKSKWNQFPATERARLKARQGVRTIGMIEVDVLDPETGKSVKRDGLSLGE 395
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
IV R G IMLGYLK+ E +S M D+ WF+TGD+GV+H DGYLEIKDRSKDVIISGGEN+
Sbjct: 396 IVLRGGCIMLGYLKNPETTSKQMNDDGWFFTGDVGVMHPDGYLEIKDRSKDVIISGGENV 455
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWE----LSKKPTEEAIIEFCR 400
SS EVESVLY +P I E A+VA+ D+FWG+ PCAFVSLK + + E+ IIE+CR
Sbjct: 456 SSVEVESVLYTHPDIKEAAVVARPDEFWGETPCAFVSLKDSGNGLIDQAMIEKKIIEYCR 515
Query: 401 ARLPHYMAHKS-VIIEDELPKTATGKIQKFVLREIVNAV 438
AR+PH+M K V+I+ ELPKT+TGKI+KFVLR++ A+
Sbjct: 516 ARMPHFMVPKMVVVIKGELPKTSTGKIKKFVLRDMARAM 554
>gi|356500976|ref|XP_003519306.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 555
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 274/456 (60%), Positives = 345/456 (75%), Gaps = 23/456 (5%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHDDV--- 56
N+ RLD + VSV+L H+ S L+FVD+ S L L ALSLFP +T P +LI D+
Sbjct: 93 NINTRLDARTVSVILRHANSTLVFVDFASRDLVLEALSLFPRQHTHRPTLILITDNTVQE 152
Query: 57 -SATSSPTV-------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRG 102
+SPTV G PNFKWV P S+WDPM LNYTSGTTSSPKGVVHCHRG
Sbjct: 153 EKTKTSPTVDNFLHTYEGLMSKGDPNFKWVLPNSDWDPMILNYTSGTTSSPKGVVHCHRG 212
Query: 103 LFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
FI + +LIDW +P P++LWTLPMFH NGW+ +WG+AA+GGTNIC+RK D ++YS+I
Sbjct: 213 AFISALDTLIDWAVPKNPIYLWTLPMFHANGWNLTWGIAALGGTNICVRKFDAGVVYSLI 272
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
++H VTH+CGA VVLNML++S +PL++PV+ +T+GA PPAAVLLR E GFVV H YG
Sbjct: 273 RNHHVTHMCGAPVVLNMLTNS-DKRPLEKPVQFITAGAPPPAAVLLRAEEFGFVVGHGYG 331
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G VVSCAWK +WN L TERARLKARQGVRT+G+ ++DVV P TG SVK DG S
Sbjct: 332 LTETGGIVVSCAWKGKWNRLPATERARLKARQGVRTVGVTEVDVVGP-TGESVKRDGVSV 390
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV + G +MLGYLKD G++ C + N FYTGD+ V+H DGYLEIKDRSK+VIISGGE
Sbjct: 391 GEIVVKGGCVMLGYLKDPSGTARCFK-NGRFYTGDVAVMHEDGYLEIKDRSKEVIISGGE 449
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCR 400
N+SS E+ESVLY +PA+NE A+VA+ D++WG+ PCAFVSLK + +K TE+ +I++C+
Sbjct: 450 NLSSVELESVLYGHPAVNEAAVVARPDEYWGETPCAFVSLKAAIKEKEKLTEKDMIQYCK 509
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVN 436
+PHYM K+V+ +DELPKT+TGKIQKFVL++I N
Sbjct: 510 DNMPHYMVPKTVVFKDELPKTSTGKIQKFVLKQIAN 545
>gi|357491641|ref|XP_003616108.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355517443|gb|AES99066.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 563
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/453 (59%), Positives = 334/453 (73%), Gaps = 20/453 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLDHK +SVLL HSESKL+FVD S L L ALSLFP+N PK VLI D+ A
Sbjct: 93 NLNFRLDHKTLSVLLIHSESKLIFVDILSLSLTLNALSLFPTNIQQPKLVLIMDETLAPH 152
Query: 61 S-PTV----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGL 103
P + G P FKW++P+SEWDP+ LNYTSGTTSSPKGVVHCHR
Sbjct: 153 QIPPLPKNVNIINTYEGLVAKGDPYFKWIRPDSEWDPITLNYTSGTTSSPKGVVHCHRAT 212
Query: 104 FIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
FI+++ SLIDW +P QPVFLWTLPMFH NGWSY W MAAVGG NIC R+ D P IY++I+
Sbjct: 213 FIVSLDSLIDWSVPVQPVFLWTLPMFHSNGWSYPWAMAAVGGINICTRRTDAPTIYTLIE 272
Query: 164 HHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
HGVTH+C A VVLNMLS+ T+PL +PV +LT G+SPP A+L R E LGF VSH +G+
Sbjct: 273 SHGVTHMCAAPVVLNMLSNFNKTEPLKKPVHVLTGGSSPPTAILTRAERLGFEVSHGFGM 332
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TE G +VSCAWK +W+ TE+AR+KARQGVR +G+A++DVV P TG SVK+DG + G
Sbjct: 333 TEVIGVIVSCAWKREWDRFPATEKARMKARQGVRKVGVAEVDVVGP-TGESVKNDGVTVG 391
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV + +MLGY KD+ +S C++ N WFYTGD+ V+H DGYLEIKDRSKD+IISGGEN
Sbjct: 392 EIVVKGACVMLGYFKDEIATSQCIKKNGWFYTGDVAVMHEDGYLEIKDRSKDLIISGGEN 451
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKK--PTEEAIIEFCRA 401
+SS EVE VLYM+ A+ E A+VA+ D FWG+ PC FVSLK EL K PT+ I EFC+
Sbjct: 452 MSSVEVEGVLYMHSAVKEAAVVARPDDFWGETPCGFVSLKDELKKNDIPTDNEIKEFCKE 511
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
+LPH+M K+++ ELPKT+TGK+QK VLR++
Sbjct: 512 KLPHFMMPKTIVFMKELPKTSTGKVQKHVLRKV 544
>gi|449506734|ref|XP_004162833.1| PREDICTED: probable acyl-activating enzyme 5, peroxisomal-like
[Cucumis sativus]
Length = 576
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/452 (59%), Positives = 335/452 (74%), Gaps = 17/452 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP---------------KP 49
RLD + +SV L HSESKLLFVD SS L AL+LFP P
Sbjct: 118 RLDARTISVQLRHSESKLLFVDQASSGLISDALALFPPERNDPCLFSYLMMLLLRISASS 177
Query: 50 VLIHDDVSATSSPTV--GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
V I DV V G P F+W++P SEWDP+ +NYTSGTTSSPKGVVH HRG+F +T
Sbjct: 178 VAIGGDVVDLYEDMVQKGDPEFRWIRPVSEWDPIVMNYTSGTTSSPKGVVHSHRGIFTVT 237
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+ SLI+W +P V+LWTLPMFH NGWS+ + +AAVGGTNIC+RK D +I+S+I H V
Sbjct: 238 LDSLIEWGVPKHSVYLWTLPMFHANGWSFPFAIAAVGGTNICIRKFDAALIFSLINRHHV 297
Query: 168 THICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
TH+CGA VVLNML++SP+ +PL+RPVKILT+GA PPAAVLLRTESLGF VSH YGLTET
Sbjct: 298 THMCGAPVVLNMLTNSPNNRPLERPVKILTAGAPPPAAVLLRTESLGFDVSHGYGLTETG 357
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G V+ C+WK +WN L TERARLKARQGVRT+ +A+ DV+ TG V+ DG S GEIV
Sbjct: 358 GLVIFCSWKLEWNQLPATERARLKARQGVRTLAMAEADVLDSGTGKRVQRDGVSIGEIVI 417
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R GS+MLGY KD E + M + WF+TGD+GV+H DGYLEIKDRSKDVIISGGEN+SS
Sbjct: 418 RGGSMMLGYFKDPEATKKAMTEEGWFFTGDVGVMHPDGYLEIKDRSKDVIISGGENLSSV 477
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVESVLY NPA+NE A+VA+ D+FWG+ PCAFVSL+ L++ PTEE IIE+C+ +L +M
Sbjct: 478 EVESVLYTNPAVNEAAVVARPDEFWGETPCAFVSLREGLTRVPTEEEIIEYCKGKLAGFM 537
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
K+V+ ++LPKT+TGKIQKF+LRE+ ++
Sbjct: 538 VPKTVVFMEQLPKTSTGKIQKFLLREMAKSMG 569
>gi|449527394|ref|XP_004170696.1| PREDICTED: probable acyl-activating enzyme 5, peroxisomal-like
[Cucumis sativus]
Length = 557
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/448 (60%), Positives = 335/448 (74%), Gaps = 19/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS--P 62
RLD + +S+LL HSESKL+FVD S L AL+LFP + P VLI DD + S P
Sbjct: 97 RLDTRTISILLRHSESKLIFVDQPSCALIFDALALFPPDMKRPLLVLITDDTAEQDSSLP 156
Query: 63 TV-----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
+V G F+W++P SEWDP+ LNYTSGTTS+ KGVV+CH G F
Sbjct: 157 SVVSIRDNFVDSYENMVKSGDSKFQWIRPLSEWDPIVLNYTSGTTSATKGVVNCHEGSFH 216
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
++W +P Q V+LWTLPMFH NGWS+ WG+AAVGGTN+C+RK D +I+S+I+ H
Sbjct: 217 GGTRFNLEWGVPKQSVYLWTLPMFHGNGWSFPWGIAAVGGTNVCIRKFDSRLIFSLIRRH 276
Query: 166 GVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
VTH+CGA VVLNML++SP PLDRPVKILT+GA PPA+VLLRTESLGFVV+H YGLTE
Sbjct: 277 HVTHLCGAPVVLNMLTNSPDNLPLDRPVKILTAGAPPPASVLLRTESLGFVVTHGYGLTE 336
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
+AG ++ C+WKS+WN L E+ARLKARQGVR + + +DV+ PET SVK DG S GEI
Sbjct: 337 SAGTIICCSWKSEWNQLPAIEQARLKARQGVRMLAVEAVDVLDPETRKSVKRDGASIGEI 396
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
V R S+MLGYLKD E +S M ++ WF+TGD+GV+H DGY+EIKDRSKDVIISGGEN+S
Sbjct: 397 VVRGPSLMLGYLKDTEATSKAMSEDGWFFTGDVGVMHPDGYIEIKDRSKDVIISGGENLS 456
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPH 405
S EVESVLYMNP +NE A+VA+ D+FWG+ PCAF+SLK LS+KPTEE IIE+C+ +LP
Sbjct: 457 SVEVESVLYMNPMVNEAAVVARPDEFWGETPCAFISLKEGLSRKPTEEEIIEYCKGKLPK 516
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLRE 433
+M K+VI E+PKTATGK QKFVLR+
Sbjct: 517 FMVPKTVIFMTEMPKTATGKFQKFVLRQ 544
>gi|15219014|ref|NP_173573.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|75311430|sp|Q9LPK6.1|AEE9_ARATH RecName: Full=Probable acyl-activating enzyme 9; AltName:
Full=AMP-binding protein 9; Short=AtAMPBP9
gi|9454577|gb|AAF87900.1|AC015447_10 Putative amp-binding protein [Arabidopsis thaliana]
gi|20799727|gb|AAM28626.1|AF503768_1 adenosine monophosphate binding protein 9 AMPBP9 [Arabidopsis
thaliana]
gi|18176404|gb|AAL60038.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|22136898|gb|AAM91793.1| putative amp-binding protein [Arabidopsis thaliana]
gi|332191994|gb|AEE30115.1| putative AMP-binding protein [Arabidopsis thaliana]
Length = 550
Score = 556 bits (1434), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/455 (58%), Positives = 335/455 (73%), Gaps = 18/455 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD +SVLL HSESKL+FVD S + L A+S N P VL+ DD S
Sbjct: 96 NINPRLDAHALSVLLRHSESKLVFVDPNSISVVLEAVSFMRQNE-KPHLVLLDDDQEDGS 154
Query: 61 -SPTV--------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
SP+ G FKW++P++EW PM LNYTSGTTSSPKGVV HR +F+
Sbjct: 155 LSPSAASDFLDTYQGVMERGDSRFKWIRPQTEWQPMILNYTSGTTSSPKGVVLSHRAIFM 214
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+TVSSL+DW PN+PV+LWTLPMFH NGW Y+WG AAVG TN+C R+VD P IY +I H
Sbjct: 215 LTVSSLLDWHFPNRPVYLWTLPMFHANGWGYTWGTAAVGATNVCTRRVDAPTIYDLIDKH 274
Query: 166 GVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
VTH+C A +VLNML++ PS KPL PV+++T+GA PPAA++ R E+LGF V H YGLTE
Sbjct: 275 HVTHMCAAPMVLNMLTNYPSRKPLKNPVQVMTAGAPPPAAIISRAETLGFNVGHGYGLTE 334
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
T G VVSCAWK++W+ L ERARLK+RQGVRTIG A++DV P TG SV+HDG S GEI
Sbjct: 335 TGGPVVSCAWKAEWDHLDPLERARLKSRQGVRTIGFAEVDVRDPRTGKSVEHDGVSVGEI 394
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
V + GS+MLGY KD EG++ CMR++ WFY+GD+GV+H DGYLE+KDRSKDVII GGENIS
Sbjct: 395 VLKGGSVMLGYYKDPEGTAACMREDGWFYSGDVGVIHEDGYLEVKDRSKDVIICGGENIS 454
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARL 403
SAEVE+VLY NP + E A+VA+ DK WG+ PCAFVSLK++ + TE I EFC+ RL
Sbjct: 455 SAEVETVLYTNPVVKEAAVVAKPDKMWGETPCAFVSLKYDSNGNGLVTEREIREFCKTRL 514
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
P YM + VI ++ELPKT+TGKIQKF+LR++ ++
Sbjct: 515 PKYMVPRKVIFQEELPKTSTGKIQKFLLRQMAKSL 549
>gi|297839481|ref|XP_002887622.1| hypothetical protein ARALYDRAFT_339769 [Arabidopsis lyrata subsp.
lyrata]
gi|297333463|gb|EFH63881.1| hypothetical protein ARALYDRAFT_339769 [Arabidopsis lyrata subsp.
lyrata]
Length = 703
Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust.
Identities = 262/449 (58%), Positives = 340/449 (75%), Gaps = 19/449 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD + VSVLL H ESKLLFVD S L + A++ + IL VLI D +
Sbjct: 255 NLNTRLDAQTVSVLLRHCESKLLFVDVFYSDLVVEAIATLLNPPIL---VLIADQEEGAA 311
Query: 61 SPTV--------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
T G+P+FKW++PESEWDP+ +NYTSGTTSSPKGVVHCHRG+F++
Sbjct: 312 VVTERSKFCYLYSDLVKRGNPDFKWIRPESEWDPIVVNYTSGTTSSPKGVVHCHRGIFVM 371
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+ SL DW +P PV+LWTLP+FH NGW+Y WG+AAVGGTN+C+RK+ P++Y +I+ HG
Sbjct: 372 ALDSLTDWAVPKNPVYLWTLPIFHANGWTYPWGIAAVGGTNVCVRKLHAPLLYRLIRDHG 431
Query: 167 VTHICGALVVLNMLSSS-PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
VTH+CGA ++L +LS+S S +PL PVK LT+G++PPA VLLR ESLGF+VSH YGLTE
Sbjct: 432 VTHMCGAPILLQILSASQESEQPLKNPVKFLTAGSAPPATVLLRAESLGFIVSHGYGLTE 491
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
TAG +VSCAW +WN L +++ARLK+RQGVRT+G +++DVV PE+G V+ DG + GEI
Sbjct: 492 TAGVIVSCAWNPKWNRLPASDQARLKSRQGVRTVGFSEIDVVDPESGRRVERDGATFGEI 551
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
V R SIMLGYLKD G+ + N WF+TGD+GV+H DGYLEIKDRSKDVIISGGEN+S
Sbjct: 552 VMRGSSIMLGYLKDPIGTQKSFK-NGWFFTGDVGVIHGDGYLEIKDRSKDVIISGGENVS 610
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPH 405
S EVE+VLY NPA+NE A+VA+ D+FWG+ PCAFVSLK L++KPT++ IIE+C+ ++P
Sbjct: 611 SVEVEAVLYTNPAVNEAAVVARPDEFWGETPCAFVSLKPGLTRKPTDKEIIEYCKKKMPR 670
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLREI 434
YM K+V +ELPK++TGKI K +L+EI
Sbjct: 671 YMVPKTVSFLEELPKSSTGKITKLLLKEI 699
>gi|145323968|ref|NP_001077573.1| pMF8-like amp-binding protein [Arabidopsis thaliana]
gi|75311431|sp|Q9LPK7.1|AEE10_ARATH RecName: Full=Probable acyl-activating enzyme 10; AltName:
Full=AMP-binding protein 10; Short=AtAMPBP10
gi|9454578|gb|AAF87901.1|AC015447_11 Putative amp-binding protein [Arabidopsis thaliana]
gi|91805819|gb|ABE65638.1| AMP-binding protein [Arabidopsis thaliana]
gi|332191993|gb|AEE30114.1| pMF8-like amp-binding protein [Arabidopsis thaliana]
Length = 549
Score = 556 bits (1432), Expect = e-156, Method: Compositional matrix adjust.
Identities = 269/455 (59%), Positives = 337/455 (74%), Gaps = 17/455 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD +SVLL HSES+L+FVD++S L L A+SLF + P VL+ DD S
Sbjct: 96 NINPRLDAHALSVLLRHSESRLVFVDHRSISLVLEAVSLFTQHE-KPHLVLLDDDQENDS 154
Query: 61 SPTV------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
S G+ FKW++P++EW PM LNYTSGTTSSPKGVV HR +F++TV
Sbjct: 155 SSASDFLDTYEEIMERGNSRFKWIRPQTEWQPMVLNYTSGTTSSPKGVVLSHRAIFMLTV 214
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
SSL+DW +PN+PV+LWTLPMFH NGW Y+WG AAVG TNIC R+VD P IY++I H VT
Sbjct: 215 SSLLDWSVPNRPVYLWTLPMFHANGWGYTWGTAAVGATNICTRRVDAPTIYNLIDKHNVT 274
Query: 169 HICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
H+C A +VLNML + P + PL PV+++TSGA PPA ++ R ESLGF VSHSYGLTET+G
Sbjct: 275 HMCAAPMVLNMLINYPLSTPLKNPVQVMTSGAPPPATIISRAESLGFNVSHSYGLTETSG 334
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
VVSCAWK +W+ L ERARLK+RQGVRT+G ++DV +TG SVKHDG S GEIVFR
Sbjct: 335 PVVSCAWKPKWDHLDPLERARLKSRQGVRTLGFTEVDVRDRKTGKSVKHDGVSVGEIVFR 394
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
S+MLGY KD +G++ CMR++ WFY+GDIGV+H DGYLEIKDRSKDVII GGENISSAE
Sbjct: 395 GSSVMLGYYKDPQGTAACMREDGWFYSGDIGVIHKDGYLEIKDRSKDVIICGGENISSAE 454
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWEL----SKKPTEEAIIEFCRARLP 404
+E+VLY NP + E A+VA+ DK WG+ PCAFVSLK + S TE I EFC+ +LP
Sbjct: 455 IETVLYTNPVVKEAAVVAKPDKMWGETPCAFVSLKCDNNGDGSVPVTEREIREFCKTKLP 514
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
YM + VI ++ELPKT+TGKIQKF+LR++ ++
Sbjct: 515 KYMVPRKVIFQEELPKTSTGKIQKFLLRQMAKTLS 549
>gi|356551974|ref|XP_003544347.1| PREDICTED: 2-succinylbenzoate--CoA ligase-like [Glycine max]
Length = 551
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 273/432 (63%), Positives = 327/432 (75%), Gaps = 13/432 (3%)
Query: 11 VSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA-TSSPTV----- 64
+SVLL HSESKL+FV S L L ALS FP T P VLI DD A T SP +
Sbjct: 103 LSVLLRHSESKLVFVHSHSLSLILLALSNFPITTPRPSLVLITDDADAITRSPVIDTYED 162
Query: 65 ----GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP 120
G+PNFKWVQP SEWDP+ LNYTSGTTSSPKGVV HR FI+T+ SLIDW +P QP
Sbjct: 163 LIRKGNPNFKWVQPNSEWDPITLNYTSGTTSSPKGVVQSHRATFIMTLDSLIDWCVPKQP 222
Query: 121 VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML 180
V+LWTLPMFH NGW++ WG+AA GGTNIC RK+D P IY +I+ H VTH+C A VVLNML
Sbjct: 223 VYLWTLPMFHSNGWTFPWGIAAAGGTNICARKIDAPTIYRLIESHNVTHMCAAPVVLNML 282
Query: 181 SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWN 240
+ T+P+ PV +LT G+ PPAA+L R E LGF VSH YG+TET G VVSCAWK +W+
Sbjct: 283 LT--RTEPVKNPVHVLTGGSPPPAAILTRAEELGFRVSHGYGMTETLGVVVSCAWKKEWD 340
Query: 241 TLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQ 300
TERAR KARQGVRT+ + ++DVV P TG+SVK DG + GEIVFR +MLGYLKD
Sbjct: 341 KFPSTERARFKARQGVRTVAMTEVDVVDPTTGISVKRDGVTPGEIVFRGSCVMLGYLKDI 400
Query: 301 EGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAIN 360
EG+ C+R N+W YTGD+GV+H DGYLEIKDRSKDVIISGGEN+SS EVESVLY +PA+N
Sbjct: 401 EGTKRCIR-NNWLYTGDVGVMHGDGYLEIKDRSKDVIISGGENLSSVEVESVLYGHPAVN 459
Query: 361 EVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPK 420
EVA+VA+ D+FWG+ PCAFV LK L P+E+ ++EFCR RLPH+M K+V+ ++ LPK
Sbjct: 460 EVAVVARPDEFWGETPCAFVMLKEGLVAPPSEKELVEFCRERLPHFMVPKTVVFKEALPK 519
Query: 421 TATGKIQKFVLR 432
T+TGKIQK VLR
Sbjct: 520 TSTGKIQKHVLR 531
>gi|356499050|ref|XP_003518357.1| PREDICTED: 2-succinylbenzoate--CoA ligase-like [Glycine max]
Length = 553
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 264/440 (60%), Positives = 325/440 (73%), Gaps = 15/440 (3%)
Query: 11 VSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV------ 64
+SVLL HSESKL+FV S PL L ALS FP T P VLI DD A +
Sbjct: 103 LSVLLRHSESKLVFVHSHSLPLILRALSNFPKTTPRPSLVLITDDADAVTVSLAHVIDTY 162
Query: 65 ------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
G+PNF W +P SEWDP+ LNYTSGTTSSPKGVVH HR FI+ + SLIDW +P
Sbjct: 163 EGLIKKGNPNFHWARPNSEWDPITLNYTSGTTSSPKGVVHSHRATFIMALDSLIDWCVPK 222
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
QPV+LWTLPMFH NGW++ WG+AA GGTN+C RK+D P+IY +I+ H VTH+C A VVLN
Sbjct: 223 QPVYLWTLPMFHSNGWTFPWGIAAAGGTNVCPRKIDAPMIYHLIQSHNVTHMCAAPVVLN 282
Query: 179 MLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQ 238
+L + T+P+ PV +LT G+ PPAA+L R E LGF V H YG+TET G VVSCAWK +
Sbjct: 283 LLLT--RTEPVKNPVHVLTGGSPPPAAILTRAEKLGFRVRHGYGMTETLGVVVSCAWKKE 340
Query: 239 WNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLK 298
W+ TERAR KARQGVRT+ + ++DVV P TG+SVK DG + GEIVFR +MLGYLK
Sbjct: 341 WDKFPATERARFKARQGVRTVAMTEVDVVDPATGVSVKRDGVTSGEIVFRGACVMLGYLK 400
Query: 299 DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPA 358
D +G+ C+R N+W YTGD+GV+H DGYLEIKDRSKDVIISGGEN+SS EVE+VLY +PA
Sbjct: 401 DSDGTKRCIR-NNWLYTGDVGVMHGDGYLEIKDRSKDVIISGGENLSSVEVEAVLYDHPA 459
Query: 359 INEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDEL 418
+NEVA+VA+ D+FWG+ PCAFV LK L P+E+ ++EFCR RLPH+M K+V+ ++ L
Sbjct: 460 VNEVAVVARPDEFWGETPCAFVMLKEGLVAPPSEKEVVEFCRERLPHFMVPKTVVFKEAL 519
Query: 419 PKTATGKIQKFVLREIVNAV 438
PKT+TGKIQK VLR A+
Sbjct: 520 PKTSTGKIQKHVLRMDAQAM 539
>gi|297850586|ref|XP_002893174.1| hypothetical protein ARALYDRAFT_889616 [Arabidopsis lyrata subsp.
lyrata]
gi|297339016|gb|EFH69433.1| hypothetical protein ARALYDRAFT_889616 [Arabidopsis lyrata subsp.
lyrata]
Length = 550
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/455 (58%), Positives = 333/455 (73%), Gaps = 18/455 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD +SVLL HSESKL+FVD S L L A+S + P VL+ DD S
Sbjct: 96 NINPRLDAHALSVLLRHSESKLVFVDPNSISLVLEAVSFLGQHE-KPHLVLLEDDQEDGS 154
Query: 61 SPTV---------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
S G FKW++P++EW PM LNYTSGTTSSPKGVV HR +F+
Sbjct: 155 SSASAASDFLDTYQGIMERGDSRFKWIRPQTEWQPMILNYTSGTTSSPKGVVLSHRAIFM 214
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+TVSSL+DW PN+PV+LWTLPMFH NGW Y+WG AAVG TN+C R+VD P IY +I H
Sbjct: 215 LTVSSLLDWHFPNRPVYLWTLPMFHANGWGYTWGTAAVGATNVCTRRVDAPTIYDLIDKH 274
Query: 166 GVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
VTH+C A +VLNML++ PS KPL PV+++T+GA PPAA++ R ESLGF V H YGLTE
Sbjct: 275 HVTHMCAAPMVLNMLTNYPSRKPLKNPVQVMTAGAPPPAAIISRAESLGFNVGHGYGLTE 334
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
T G VVSCAWK++W+ L ERARLK+RQGVRTIG AD+DV P TG SV+HDG S GEI
Sbjct: 335 TGGPVVSCAWKAEWDHLDPLERARLKSRQGVRTIGFADVDVRDPRTGKSVEHDGVSVGEI 394
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
V + GS+MLGY KD EG++ CMR++ WFY+GD+GV+H DGYLE+KDRSKDVII GGENIS
Sbjct: 395 VLKGGSVMLGYYKDPEGTAACMREDGWFYSGDVGVIHEDGYLEVKDRSKDVIICGGENIS 454
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARL 403
SAEVE+VLY NP + E A+VA+ DK WG+ PCAFVSLK++ + TE I EFC+ +L
Sbjct: 455 SAEVETVLYTNPVVKEAAVVAKPDKMWGETPCAFVSLKYDNNGNGSVTEREIREFCKTKL 514
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
P YM + VI ++ELPKT+TGKIQKF+LR++ ++
Sbjct: 515 PKYMVPRKVIFQEELPKTSTGKIQKFLLRQMAKSL 549
>gi|116830899|gb|ABK28406.1| unknown [Arabidopsis thaliana]
Length = 550
Score = 553 bits (1425), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/455 (58%), Positives = 336/455 (73%), Gaps = 17/455 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD +SVLL HSES+L+FVD++S L L A+SLF + P VL+ DD S
Sbjct: 96 NINPRLDAHALSVLLRHSESRLVFVDHRSISLVLEAVSLFTQHE-KPHLVLLDDDQENDS 154
Query: 61 SPTV------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
S G+ FKW++P++EW PM LNYTSGTTSSPKGVV HR +F++TV
Sbjct: 155 SSASDFLDTYEEIMERGNSRFKWIRPQTEWQPMVLNYTSGTTSSPKGVVLSHRAIFMLTV 214
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
SSL+DW +PN+PV+LWTLPMFH NGW Y+WG AAVG TNIC R+VD P IY++I H VT
Sbjct: 215 SSLLDWSVPNRPVYLWTLPMFHANGWGYTWGTAAVGATNICTRRVDAPTIYNLIDKHNVT 274
Query: 169 HICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
H+C A +VLNML + P + PL PV+++TSGA PPA ++ R ESLGF VSHSYGLTET+G
Sbjct: 275 HMCAAPMVLNMLINYPLSTPLKNPVQVMTSGAPPPATIISRAESLGFNVSHSYGLTETSG 334
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
VVSCAWK +W+ L ERARLK+RQGVRT+G ++DV +TG SVKHDG GEIVFR
Sbjct: 335 PVVSCAWKPKWDHLDPLERARLKSRQGVRTLGFTEVDVRDRKTGKSVKHDGVLVGEIVFR 394
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
S+MLGY KD +G++ CMR++ WFY+GDIGV+H DGYLEIKDRSKDVII GGENISSAE
Sbjct: 395 GSSVMLGYYKDPQGTAACMREDGWFYSGDIGVIHKDGYLEIKDRSKDVIICGGENISSAE 454
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWEL----SKKPTEEAIIEFCRARLP 404
+E+VLY NP + E A+VA+ DK WG+ PCAFVSLK + S TE I EFC+ +LP
Sbjct: 455 IETVLYTNPVVKEAAVVAKPDKMWGETPCAFVSLKCDNNGDGSVPVTEREIREFCKTKLP 514
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
YM + VI ++ELPKT+TGKIQKF+LR++ ++
Sbjct: 515 KYMVPRKVIFQEELPKTSTGKIQKFLLRQMAKTLS 549
>gi|380042370|gb|AFD33349.1| acyl-activating enzyme 5 [Cannabis sativa]
Length = 575
Score = 553 bits (1424), Expect = e-155, Method: Compositional matrix adjust.
Identities = 266/457 (58%), Positives = 335/457 (73%), Gaps = 19/457 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--VSA 58
N+ RL+ +SV+L HSESKL+FVD S L L A++LFP NT P VLI D+
Sbjct: 100 NINTRLNAVTISVMLRHSESKLVFVDQLSVRLVLDAVNLFPKNTPTPLLVLITDESITDQ 159
Query: 59 TSSPTV----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRG 102
TS V G NFKWV+P +EWDP+ LNYTSGTTSSPKGVVH HRG
Sbjct: 160 TSLTDVKDLERFVCCYEELVEKGSENFKWVRPVNEWDPIVLNYTSGTTSSPKGVVHSHRG 219
Query: 103 LFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
+F++T+ SLIDW +P QPV+LWTLPMFH NGW Y+WG AAVG TN+CLR+ D II+++I
Sbjct: 220 VFVVTLDSLIDWGVPKQPVYLWTLPMFHANGWGYTWGTAAVGATNVCLRRFDGEIIFNLI 279
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
+ H VTH+C A +VLNMLS+SP+ PL PV ++T GA PPAAVLLRTESLGFV+SH YG
Sbjct: 280 RRHRVTHMCAAPIVLNMLSNSPNAGPLPNPVHVMTGGAPPPAAVLLRTESLGFVISHGYG 339
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
+TE G VVSCAWK +WN TERARLK+RQGVRT + ++DVV P +G+SVK DG +
Sbjct: 340 MTEMLGVVVSCAWKKEWNMFPATERARLKSRQGVRTAAMTEVDVVDPNSGVSVKRDGLTM 399
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV + +MLGYLK+ ++ C+RD WFYTGD+ V+H DGYLEIKDRSKDVIISGGE
Sbjct: 400 GEIVLKGSCVMLGYLKNSTATAKCIRDGGWFYTGDMAVMHPDGYLEIKDRSKDVIISGGE 459
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL-KWELSKKPTEEAIIEFCRA 401
N+SS EVES LY +PA++E A+VA D++WG+ P AFV+L K + TE+ I+E+CR
Sbjct: 460 NVSSVEVESALYSHPAVDEAAVVACPDEYWGETPLAFVTLKKGAVRVTVTEKEILEYCRE 519
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+L H+M K V+ D+LPKT+TGKIQKF L+EIV ++
Sbjct: 520 KLAHFMVPKVVVFRDKLPKTSTGKIQKFTLKEIVKSM 556
>gi|242077652|ref|XP_002448762.1| hypothetical protein SORBIDRAFT_06g032750 [Sorghum bicolor]
gi|241939945|gb|EES13090.1| hypothetical protein SORBIDRAFT_06g032750 [Sorghum bicolor]
Length = 560
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/449 (59%), Positives = 327/449 (72%), Gaps = 17/449 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD----DVSATS 60
RLD + V+VLL HS SKL+F D S PL AL P P+ V + D + A
Sbjct: 97 RLDARTVAVLLRHSGSKLVFADPASVPLVRDALRQLPPGHRAPRVVPVEDPHEKEFPAAP 156
Query: 61 SPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
T+ G P F WV+P SEWDPM LNYTSGTTS+PKGVVHCHRG+F++TV +L+
Sbjct: 157 PGTLTYEALLDRGDPEFAWVRPRSEWDPMILNYTSGTTSAPKGVVHCHRGIFLVTVDTLV 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W +P QP +LWTLPMFH NGW + WGMAAVGGTN+CLR+V +Y+ I GV H+CG
Sbjct: 217 EWAVPKQPTYLWTLPMFHANGWCFPWGMAAVGGTNVCLRRVHAAEVYATIARRGVDHLCG 276
Query: 173 ALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VVLNML+++P + +PL V+ILT+GA PPAAVL RTES+GF V+H YGLTETAG V
Sbjct: 277 APVVLNMLANAPDAARRPLPGKVRILTAGAPPPAAVLHRTESIGFEVTHGYGLTETAGLV 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
VSCAWK +WN L +ERARLKARQGVRT +A++D+V ETG SV DG + GEIV R G
Sbjct: 337 VSCAWKGEWNKLPASERARLKARQGVRTPAMAEVDIVDGETGHSVPRDGSTMGEIVLRGG 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+MLGYL D + +RDN WFYTGD+GV+H DGY+EI+DRSKDVIISGGENISS EVE
Sbjct: 397 CVMLGYLNDDTATRAAIRDNGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGENISSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP---TEEAIIEFCRARLPHYM 407
SVLY +PA+NE A+VA+ D+FWG+ PCAFVSLK E S P T +I +CR R+PHYM
Sbjct: 457 SVLYNHPAVNEAAVVARPDEFWGETPCAFVSLKEERSGSPGAVTAADVIAWCRDRMPHYM 516
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREIVN 436
K+V++ ELPKT+TGKIQK+VLR +
Sbjct: 517 VPKTVVLRAELPKTSTGKIQKYVLRNLAK 545
>gi|20799725|gb|AAM28625.1|AF503767_1 adenosine monophosphate binding protein 8 AMPBP8 [Arabidopsis
thaliana]
Length = 542
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/451 (58%), Positives = 343/451 (76%), Gaps = 21/451 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD + VSVLL H ESKLLFVD+ S LA+ A+++ + IL VLI ++
Sbjct: 92 NINTRLDARTVSVLLRHCESKLLFVDFFYSDLAVEAITMLLNPPIL---VLIANEEEEEG 148
Query: 61 SPTV----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
V G+P+FKW++P SEWDP+ +NYTSGTTSSPKGVVHCHRG+F
Sbjct: 149 GAEVTERSKFCYLYSDLITRGNPDFKWIRPGSEWDPIVVNYTSGTTSSPKGVVHCHRGIF 208
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
++T+ SL DW +P PV+LWTLP+FH NGW+Y WG+AAVGGTN+C+RK+ P IY +I+
Sbjct: 209 VMTLDSLTDWAVPKTPVYLWTLPIFHANGWTYPWGIAAVGGTNVCVRKLHAPSIYHLIRD 268
Query: 165 HGVTHICGALVVLNMLSSS-PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
HGVTH+ GA +VL +LS+S S +PL PV LT+G+SPPA VLLR ESLGF+VSH YGL
Sbjct: 269 HGVTHMYGAPIVLQILSASQESDQPLKSPVNFLTAGSSPPATVLLRAESLGFIVSHGYGL 328
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TETAG +VSCAWK WN L +++A+LK+RQGVRT+G +++DVV PE+G SV+ DG++ G
Sbjct: 329 TETAGVIVSCAWKPNWNRLPASDQAQLKSRQGVRTVGFSEIDVVDPESGRSVERDGETVG 388
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R SIMLGYLK+ G+ + N WF+TGD+GV+H DGYLEIKDRSKDVIISGGEN
Sbjct: 389 EIVLRGSSIMLGYLKNPIGTQNSFK-NGWFFTGDLGVIHGDGYLEIKDRSKDVIISGGEN 447
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL 403
+SS EVE+VLY NPA+NE A+VA+ D+FWG+ PCAFVSLK L++KPT++ IIE+C+ ++
Sbjct: 448 VSSVEVEAVLYTNPAVNEAAVVARPDEFWGETPCAFVSLKPGLTRKPTDKEIIEYCKYKM 507
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
P YMA K+V +ELPKT+TGKI K +L+EI
Sbjct: 508 PRYMAPKTVSFLEELPKTSTGKIIKSLLKEI 538
>gi|115461284|ref|NP_001054242.1| Os04g0674700 [Oryza sativa Japonica Group]
gi|38344924|emb|CAE03240.2| OSJNBa0018M05.15 [Oryza sativa Japonica Group]
gi|113565813|dbj|BAF16156.1| Os04g0674700 [Oryza sativa Japonica Group]
gi|215741282|dbj|BAG97777.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 558
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/444 (60%), Positives = 323/444 (72%), Gaps = 15/444 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD + VSVLL HS SKL+FVD P+ AL L P+ P+ VL+ D P
Sbjct: 98 RLDARTVSVLLRHSGSKLIFVDPALLPVLRDALRLLPAGHTAPRVVLVEDPHEKEFPPAP 157
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F WV+P SEWDPM LNYTSGTTS+PKGVVHCHRG+F+ITV SL+
Sbjct: 158 AAALTYERLVEKGDPEFAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLITVDSLV 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
DW +P +P +LWTLPMFH NGWS+ WGMA VGGTN+CLR+VD ++ I GV H+CG
Sbjct: 218 DWAVPPRPTYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVDAAEVFDTIARRGVNHLCG 277
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VVLNML+++P KPL V+ILT+GA PPAAVL RTE++GF VSH YGLTETAG V
Sbjct: 278 APVVLNMLANAPEGVRKPLPGKVRILTAGAPPPAAVLYRTEAIGFEVSHGYGLTETAGLV 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+SCAWK +W+ L +ERARLKARQGVRT G+A++DVV ETG SV DG + GEIV R G
Sbjct: 338 LSCAWKGEWDKLPASERARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMGEIVLRGG 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
I LGYL D+ + +RDN WFYTGD+GV+H DGY+EI+DRSKDVIISGGENISS EVE
Sbjct: 398 CITLGYLNDEAATKAAIRDNGWFYTGDVGVMHPDGYVEIRDRSKDVIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SVLY +PA+NE A+VA+ D+FWG+ PCAFVSLK + T ++ + R R+P YM K
Sbjct: 458 SVLYGHPAVNEAAVVARPDEFWGETPCAFVSLK-QGGGAVTAADVVAWSRERMPRYMVPK 516
Query: 411 SVIIEDELPKTATGKIQKFVLREI 434
+VI DELPKT+TGKIQK+VLR I
Sbjct: 517 TVIFRDELPKTSTGKIQKYVLRNI 540
>gi|90399049|emb|CAJ86098.1| H0103C06.2 [Oryza sativa Indica Group]
gi|90399203|emb|CAH68190.1| H0403D02.18 [Oryza sativa Indica Group]
Length = 558
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/444 (60%), Positives = 323/444 (72%), Gaps = 15/444 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD + VSVLL HS SKL+FVD P+ AL L P+ P+ VL+ D P
Sbjct: 98 RLDARTVSVLLRHSGSKLIFVDPALLPVLRDALRLLPAGHTAPRVVLVEDPHEKEFPPAP 157
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F WV+P SEWDPM LNYTSGTTS+PKGVVHCHRG+F+ITV SL+
Sbjct: 158 AAALTYERLVEKGDPEFAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLITVDSLV 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
DW +P +P +LWTLPMFH NGWS+ WGMA VGGTN+CLR+VD ++ I GV H+CG
Sbjct: 218 DWAVPPRPTYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVDAAEVFDTIARRGVNHLCG 277
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VVLNML+++P KPL V+ILT+GA PPAAVL RTE++GF VSH YGLTETAG V
Sbjct: 278 APVVLNMLANAPEGVRKPLPGKVRILTAGAPPPAAVLYRTEAIGFEVSHGYGLTETAGLV 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+SCAWK +W+ L +ERARLKARQGVRT G+A++DVV ETG SV DG + GEIV R G
Sbjct: 338 LSCAWKGEWDKLPASERARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMGEIVLRGG 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
I LGYL D+ + +RDN WFYTGD+GV+H DGY+EI+DRSKDVIISGGENISS EVE
Sbjct: 398 CITLGYLNDEAATKAAIRDNGWFYTGDVGVMHPDGYVEIRDRSKDVIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SVLY +PA+NE A+VA+ D+FWG+ PCAFVSLK + T ++ + R R+P YM K
Sbjct: 458 SVLYGHPAVNEAAVVARPDEFWGETPCAFVSLK-QGGGAVTAADVVAWSRERMPRYMVPK 516
Query: 411 SVIIEDELPKTATGKIQKFVLREI 434
+VI DELPKT+TGKIQK+VLR I
Sbjct: 517 TVIFRDELPKTSTGKIQKYVLRNI 540
>gi|413944279|gb|AFW76928.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 554
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/450 (59%), Positives = 327/450 (72%), Gaps = 17/450 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD--DVSA 58
N+ RLD + V+VLL HS SKL+FVD S L AL P P+ + + D +
Sbjct: 93 NINMRLDARTVAVLLRHSGSKLVFVDPASLTLIRDALKQLPQGHPAPRVIPVEDPHEKGL 152
Query: 59 TSSP----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
++P G P F WV+P SEWDPM LNYTSGTTS PKGVVHCHRG+F+IT+
Sbjct: 153 PAAPPGSLTYEGLLEKGDPEFAWVRPASEWDPMVLNYTSGTTSEPKGVVHCHRGIFLITL 212
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
SLI+W +P QP +LWTLPMFH NGWS+ WGMA VGGTN+CLR+VD +Y+ I GV+
Sbjct: 213 DSLIEWAVPPQPTYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVDAAEVYATIAGRGVS 272
Query: 169 HICGALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+CGA VVLNML+++P +PL V+ILT+GA PPAAVL RTES+GF V H YGLTET
Sbjct: 273 HLCGAPVVLNMLANAPEGVRRPLPGKVRILTAGAPPPAAVLHRTESIGFEVIHGYGLTET 332
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
AG VV CAWK +WN L +ERARLKARQGVRT G+A++D+V ETG SV DG + GEIV
Sbjct: 333 AGLVVCCAWKGEWNKLPASERARLKARQGVRTPGMAEVDIVDGETGRSVPRDGSTMGEIV 392
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
R G +MLGYL D + + +RDN WFYTGD+GV+H DGY+EI+DRSKDVIISGGENISS
Sbjct: 393 LRGGCVMLGYLDDDKATKAAIRDNGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGENISS 452
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
EVESVLY +PA+NE A+VA+ D FWG+ PCAFVSLK E S T +I +CR R+PHY
Sbjct: 453 VEVESVLYSHPAVNEAAVVARPDDFWGETPCAFVSLKEEGS---TAADVIAWCRQRMPHY 509
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLREIVN 436
M ++V+ DELPKT+TGKIQK+VLR +
Sbjct: 510 MVPRTVVFRDELPKTSTGKIQKYVLRNLAK 539
>gi|15222924|ref|NP_177724.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
gi|75311470|sp|Q9LQS1.1|AAE8_ARATH RecName: Full=Probable acyl-activating enzyme 8; AltName:
Full=AMP-binding protein 8; Short=AtAMPBP8
gi|6721108|gb|AAF26762.1|AC007396_11 T4O12.18 [Arabidopsis thaliana]
gi|17979422|gb|AAL49853.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|23296913|gb|AAN13201.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|332197660|gb|AEE35781.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
Length = 544
Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust.
Identities = 265/451 (58%), Positives = 343/451 (76%), Gaps = 21/451 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD + VSVLL H ESKLLFVD+ S LA+ A+++ + IL VLI ++
Sbjct: 94 NINTRLDARTVSVLLRHCESKLLFVDFFYSDLAVEAITMLLNPPIL---VLIANEEEEEG 150
Query: 61 SPTV----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
V G+P+FKW++P SEWDP+ +NYTSGTTSSPKGVVHCHRG+F
Sbjct: 151 GAEVTERSKFCYLYSDLITRGNPDFKWIRPGSEWDPIVVNYTSGTTSSPKGVVHCHRGIF 210
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
++T+ SL DW +P PV+LWTLP+FH NGW+Y WG+AAVGGTN+C+RK+ P IY +I+
Sbjct: 211 VMTLDSLTDWAVPKTPVYLWTLPIFHANGWTYPWGIAAVGGTNVCVRKLHAPSIYHLIRD 270
Query: 165 HGVTHICGALVVLNMLSSS-PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
HGVTH+ GA +VL +LS+S S +PL PV LT+G+SPPA VLLR ESLGF+VSH YGL
Sbjct: 271 HGVTHMYGAPIVLQILSASQESDQPLKSPVNFLTAGSSPPATVLLRAESLGFIVSHGYGL 330
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TETAG +VSCAWK WN L +++A+LK+RQGVRT+G +++DVV PE+G SV+ DG++ G
Sbjct: 331 TETAGVIVSCAWKPNWNRLPASDQAQLKSRQGVRTVGFSEIDVVDPESGRSVERDGETVG 390
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R SIMLGYLK+ G+ + N WF+TGD+GV+H DGYLEIKDRSKDVIISGGEN
Sbjct: 391 EIVLRGSSIMLGYLKNPIGTQNSFK-NGWFFTGDLGVIHGDGYLEIKDRSKDVIISGGEN 449
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL 403
+SS EVE+VLY NPA+NE A+VA+ D+FWG+ PCAFVSLK L++KPT++ IIE+C+ ++
Sbjct: 450 VSSVEVEAVLYTNPAVNEAAVVARPDEFWGETPCAFVSLKPGLTRKPTDKEIIEYCKYKM 509
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
P YMA K+V +ELPKT+TGKI K +L+EI
Sbjct: 510 PRYMAPKTVSFLEELPKTSTGKIIKSLLKEI 540
>gi|414584805|tpg|DAA35376.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 556
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 264/444 (59%), Positives = 327/444 (73%), Gaps = 15/444 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI---HDDVSATSS 61
RLD + VSVLL H+ SKL+F D S PL ALS P P+ V + H+ ++
Sbjct: 97 RLDARTVSVLLRHAGSKLVFADPASMPLVRDALSQLPPGHPAPRVVPVEDPHETEFPAAA 156
Query: 62 PTV---------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
P G P F WV+P SEWDPM LNYTSGTTS+PKGVVHCHRG+F++TV +L+
Sbjct: 157 PGALTYEALLDGGDPEFAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLVTVDALV 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W +P +P +LWTLPMFH NGW + WGMAAVGGTN+CLR+VD +Y I GV H+CG
Sbjct: 217 EWAVPPRPTYLWTLPMFHANGWCFPWGMAAVGGTNVCLRRVDAAEVYDAIARRGVDHLCG 276
Query: 173 ALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VVLNML+++P + +PL V+ILT+GA PPAAVL RTES+GF V+H YGLTETAG V
Sbjct: 277 APVVLNMLANAPDAARRPLPGKVRILTAGAPPPAAVLHRTESIGFEVTHGYGLTETAGLV 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V CAWK +WN L +ERARLKARQGVRT G+ ++D+V ETG SV DG + GEIV R G
Sbjct: 337 VCCAWKREWNKLPASERARLKARQGVRTPGMNEVDIVDGETGRSVPRDGSTMGEIVLRGG 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+MLGYL D + + +RDN WFYTGD+GV+H DGY+EI+DRSKDVIISGGENISS EVE
Sbjct: 397 GVMLGYLNDDKATRAAIRDNGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGENISSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SVLY +PA+NE A+VA+ D+FWG+ PCAFVSLK E S T +I +CR R+PHYM K
Sbjct: 457 SVLYNHPAVNEAAVVARPDEFWGETPCAFVSLK-EGSGAVTAADVIAWCRDRMPHYMVPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREI 434
+V++ ELPKT+TGKIQK+VLR +
Sbjct: 516 TVVLRAELPKTSTGKIQKYVLRNL 539
>gi|1903034|emb|CAA64328.1| amp-binding protein [Brassica napus]
Length = 552
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/458 (58%), Positives = 332/458 (72%), Gaps = 21/458 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD----- 55
N+ RLD +SV+L HSESKL+FVD+ SS L L ALS P N P+ VL+ DD
Sbjct: 95 NINPRLDAHALSVVLRHSESKLVFVDHHSSSLVLEALSFLPKNE-KPRLVLLQDDSNISG 153
Query: 56 ---VSATSSPTV------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCH 100
+SA+SS V G P FKWV+P +EW+PM LNYTSGTTSSPKGVV H
Sbjct: 154 LTNMSASSSADVDFLDTYEGVMERGDPRFKWVRPNNEWNPMVLNYTSGTTSSPKGVVLSH 213
Query: 101 RGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYS 160
R +F+ TV+SL+ W +PN+PV+LWTLPMFH NGW Y+W AAVG TNIC+R+VD P I+
Sbjct: 214 RAVFMSTVNSLLYWSMPNRPVYLWTLPMFHANGWGYTWATAAVGATNICVRRVDAPTIFE 273
Query: 161 VIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHS 220
+I H VTH+C A +VLNML++ PS K L RPV+I+T+GA PPA V+ ESLGF V+H
Sbjct: 274 LIDKHQVTHMCAAPMVLNMLTNYPSRKQLKRPVQIMTAGAPPPATVISSAESLGFDVAHG 333
Query: 221 YGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQ 280
YGLTET G VV+CAWK +W+ L ERARLK+RQG+RT A+ DV+ TG SVKHDG
Sbjct: 334 YGLTETGGLVVTCAWKPEWDGLGQDERARLKSRQGIRTAVFAEADVLDTLTGKSVKHDGV 393
Query: 281 SQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISG 340
+ GEIVFR G +MLGY D EG++ MR++ WFYTGDIGV+H DGYLE+KDRSKDVII G
Sbjct: 394 TVGEIVFRGGCVMLGYYNDPEGTAASMREDGWFYTGDIGVMHPDGYLEVKDRSKDVIICG 453
Query: 341 GENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR 400
GENISS EVE+VLY NPA+ E A+VA+ DK WG+ PCAFVSLK TE + EFC+
Sbjct: 454 GENISSTEVETVLYTNPAVKEAAVVAKPDKMWGETPCAFVSLKCSDRGSVTEREVREFCK 513
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+LP YM ++V+ +ELPKT+TGKIQKF+LR++ ++
Sbjct: 514 KKLPKYMVPRNVVFMEELPKTSTGKIQKFLLRQMAKSL 551
>gi|30687400|ref|NP_173572.2| pMF8-like amp-binding protein [Arabidopsis thaliana]
gi|20799729|gb|AAM28627.1|AF503769_1 adenosine monophosphate binding protein 10 AMPBP10 [Arabidopsis
thaliana]
gi|332191992|gb|AEE30113.1| pMF8-like amp-binding protein [Arabidopsis thaliana]
Length = 547
Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust.
Identities = 269/455 (59%), Positives = 335/455 (73%), Gaps = 19/455 (4%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD +SVLL HSES+L+FVD++S L L A+SLF + P VL+ DD S
Sbjct: 96 NINPRLDAHALSVLLRHSESRLVFVDHRSISLVLEAVSLFTQHE-KPHLVLLDDDQENDS 154
Query: 61 SPTV------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
S G+ FKW++P++EW PM LNYTSGTTSSPKGVV HR +F++TV
Sbjct: 155 SSASDFLDTYEEIMERGNSRFKWIRPQTEWQPMVLNYTSGTTSSPKGVVLSHRAIFMLTV 214
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
SSL+DW +PN+PV+LWTLPMFH NGW Y+WG AAVG TNIC R+VD P IY++I H VT
Sbjct: 215 SSLLDWSVPNRPVYLWTLPMFHANGWGYTWGTAAVGATNICTRRVDAPTIYNLIDKHNVT 274
Query: 169 HICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
H+C A +VLNML + P + PL PV +TSGA PPA ++ R ESLGF VSHSYGLTET+G
Sbjct: 275 HMCAAPMVLNMLINYPLSTPLKNPV--MTSGAPPPATIISRAESLGFNVSHSYGLTETSG 332
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
VVSCAWK +W+ L ERARLK+RQGVRT+G ++DV +TG SVKHDG S GEIVFR
Sbjct: 333 PVVSCAWKPKWDHLDPLERARLKSRQGVRTLGFTEVDVRDRKTGKSVKHDGVSVGEIVFR 392
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
S+MLGY KD +G++ CMR++ WFY+GDIGV+H DGYLEIKDRSKDVII GGENISSAE
Sbjct: 393 GSSVMLGYYKDPQGTAACMREDGWFYSGDIGVIHKDGYLEIKDRSKDVIICGGENISSAE 452
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWEL----SKKPTEEAIIEFCRARLP 404
+E+VLY NP + E A+VA+ DK WG+ PCAFVSLK + S TE I EFC+ +LP
Sbjct: 453 IETVLYTNPVVKEAAVVAKPDKMWGETPCAFVSLKCDNNGDGSVPVTEREIREFCKTKLP 512
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
YM + VI ++ELPKT+TGKIQKF+LR++ ++
Sbjct: 513 KYMVPRKVIFQEELPKTSTGKIQKFLLRQMAKTLS 547
>gi|260446984|emb|CBG76266.1| OO_Ba0005L10-OO_Ba0081K17.17 [Oryza officinalis]
Length = 559
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 266/445 (59%), Positives = 322/445 (72%), Gaps = 15/445 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD + VSVLL HS SKL+FVD P+ AL L P+ P+ VL+ D P
Sbjct: 98 RLDARTVSVLLRHSGSKLIFVDPALLPVLRDALRLLPAGHTAPRVVLVEDPHEEELPPVP 157
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F WV+P SEWDPM LNYTSGTTS+PKGVVHCHRG+F+ITV SL+
Sbjct: 158 ATALTYERLLEKGDPEFAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLITVDSLV 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
DW +P +P +LWTLPMFH NGWS+ WGMA VGGTN+CLR+VD +Y I GV H+CG
Sbjct: 218 DWAVPPRPTYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVDAAEVYDTIARRGVNHLCG 277
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VVLNML+++P K L V+ILT+GA PPAAVL RTE++GF VSH YGLTETAG V
Sbjct: 278 APVVLNMLANAPDGVRKSLPGKVRILTAGAPPPAAVLYRTEAIGFEVSHGYGLTETAGLV 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+SCAWK +W+ L +ERARLKARQGVRT G+A++DVV ETG SV DG + GEIV R G
Sbjct: 338 LSCAWKGEWDKLPASERARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMGEIVLRGG 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
I LGYL D+ + +R+N WFYTGD+GV+H DGY+EI+DRSKDVIISGGENISS EVE
Sbjct: 398 CITLGYLNDEAATRAAIRENGWFYTGDVGVMHPDGYVEIRDRSKDVIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAH 409
SVLY +PA+NE A+VA+ D+FWG+ PCAFVSLK + A +I + R R+P YM
Sbjct: 458 SVLYGHPAVNEAAVVARPDEFWGETPCAFVSLKQGGAAGAVTAADVIAWSRGRMPRYMVP 517
Query: 410 KSVIIEDELPKTATGKIQKFVLREI 434
K+V+ DELPKT+TGKIQK+VLR I
Sbjct: 518 KTVVFRDELPKTSTGKIQKYVLRNI 542
>gi|226496297|ref|NP_001152382.1| AMP-binding protein [Zea mays]
gi|195655729|gb|ACG47332.1| AMP-binding protein [Zea mays]
Length = 554
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/448 (59%), Positives = 323/448 (72%), Gaps = 17/448 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD--DVSA 58
N+ RLD + V+VLL HS SKL+FVD S L AL P P+ + + D +
Sbjct: 93 NINMRLDARTVAVLLRHSGSKLVFVDPASLTLIRDALKQLPQGHPAPRVIPVEDPHEKGL 152
Query: 59 TSSP----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
++P G P F WV+P SEWDPM LNYTSGTTS PKGVVHCHRG+F+IT+
Sbjct: 153 PAAPPGSLTYEGLLEKGDPEFAWVRPASEWDPMVLNYTSGTTSEPKGVVHCHRGIFLITL 212
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
SLI+W +P QP +LWTLPMFH NGWS+ WGMA VGGTN+CLR+VD +Y+ I GV+
Sbjct: 213 DSLIEWAVPPQPTYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVDAAEVYATIAGRGVS 272
Query: 169 HICGALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+CGA VVLNML+++P +PL V+ILT+GA PPAAVL RTES+GF V H YGLTET
Sbjct: 273 HLCGAPVVLNMLANAPEGVRRPLPGKVRILTAGAPPPAAVLHRTESIGFEVIHGYGLTET 332
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
AG VV CAWK +WN L +ERARLKARQGVRT G+A++D+V ETG SV DG GEIV
Sbjct: 333 AGLVVCCAWKGEWNKLPASERARLKARQGVRTPGMAEVDIVDGETGXSVPXDGSXMGEIV 392
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
G +MLGYL D + +RDN WFYTGD+GV+H DGY+EI+DRSKDVII GGENISS
Sbjct: 393 LXGGCVMLGYLDDDKAXKXAIRDNGWFYTGDVGVMHPDGYMEIRDRSKDVIIXGGENISS 452
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
EVESVLY +PA+NE A+VA+ D FWG+ PCAFVSLK E S T +I +CR R+PHY
Sbjct: 453 VEVESVLYSHPAVNEAAVVARPDDFWGETPCAFVSLKEEGS---TAADVIAWCRQRMPHY 509
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLREI 434
M ++V+ DELPKT+TGKIQK+VLR +
Sbjct: 510 MVPRTVVFRDELPKTSTGKIQKYVLRNL 537
>gi|326498349|dbj|BAJ98602.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 555
Score = 543 bits (1400), Expect = e-152, Method: Compositional matrix adjust.
Identities = 259/446 (58%), Positives = 321/446 (71%), Gaps = 14/446 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD + VSVLL HS SKL+ VD P+ AL L P P+ VL+ D SP
Sbjct: 97 RLDARTVSVLLRHSGSKLILVDPALVPVLGEALRLLPPGHPAPRVVLVEDPQEKDFSPAP 156
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P F+WV+P SEWDPM LNYTSGTTS+PKGVVHCHRG+F++T+ SL+
Sbjct: 157 AAALTYEKLLEMGDPEFRWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFVVTMDSLV 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P QP +LWTLPMFH NGWS+ WGMA VGGTN+CLR+VD +Y I GVTH+CG
Sbjct: 217 SWSVPEQPTYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVDAAEVYDTIARRGVTHLCG 276
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VVLNML+++P +PL V ILT+GA PPAAVL RTE++GF VSH YGLTETAG V
Sbjct: 277 APVVLNMLANAPEGVRRPLPGKVHILTAGAPPPAAVLGRTEAIGFDVSHGYGLTETAGLV 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+ CAWK +WN L +ERARLKARQGVRT G+A++D+V ETG SV DG + GEIV R G
Sbjct: 337 LLCAWKGEWNKLPASERARLKARQGVRTPGMAEVDIVDGETGRSVPRDGATMGEIVLRGG 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+ +GY KD++ + +RD+ WFYTGD+GV+H DGYLEI+DRS+DVIISGGENISS EVE
Sbjct: 397 CVTMGYFKDEDATRAAIRDDGWFYTGDVGVMHPDGYLEIRDRSRDVIISGGENISSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
S+LY +PA+NE A+VA+ D+FWG+ PCAFVSLK T +I + R R+P YM K
Sbjct: 457 SLLYGHPAVNEAAVVARPDEFWGETPCAFVSLKEGAGGVVTAAEVIAWSRERMPGYMVPK 516
Query: 411 SVIIEDELPKTATGKIQKFVLREIVN 436
+V+ ELPKT+TGKIQK+VLR +
Sbjct: 517 TVVFRAELPKTSTGKIQKYVLRNLAK 542
>gi|15223865|ref|NP_177848.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|75278861|sp|O80658.1|AAE4_ARATH RecName: Full=Probable acyl-activating enzyme 4; AltName:
Full=AMP-binding protein 4; Short=AtAMPBP4
gi|3540196|gb|AAC34346.1| Putative amp-binding protein [Arabidopsis thaliana]
gi|332197832|gb|AEE35953.1| putative AMP-binding protein [Arabidopsis thaliana]
Length = 545
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 259/452 (57%), Positives = 337/452 (74%), Gaps = 16/452 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD--DVSA 58
N+ RLD +SVLL HSESKL+FVD+ SS L L A+S P + P+ V+++D D+ +
Sbjct: 95 NINPRLDAHALSVLLRHSESKLVFVDHHSSSLVLEAVSFLPKDE-RPRLVILNDGNDMPS 153
Query: 59 TSSPTV------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
+SS + G FKWV+P+SEW PM LNYTSGTTSSPKGVVH HR +F+
Sbjct: 154 SSSADMDFLDTYEGFMERGDLRFKWVRPKSEWTPMVLNYTSGTTSSPKGVVHSHRSVFMS 213
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
T++SL+DW +PN+PV+LWTLPMFH NGWSY+W AAVG NIC+ +VDVP I+++I +
Sbjct: 214 TINSLLDWSLPNRPVYLWTLPMFHANGWSYTWATAAVGARNICVTRVDVPTIFNLIDKYQ 273
Query: 167 VTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
VTH+C A +VLNML++ P+ KPL PVK++T+GA PPA V+ + E+LGF VSH YG+TET
Sbjct: 274 VTHMCAAPMVLNMLTNHPAQKPLQSPVKVMTAGAPPPATVISKAEALGFDVSHGYGMTET 333
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G VVSCA K +W+ L ERA+ K+RQG+RT A++DV P +G SVKHDG + GEIV
Sbjct: 334 GGLVVSCALKPEWDRLEPDERAKQKSRQGIRTAVFAEVDVRDPISGKSVKHDGATVGEIV 393
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
FR GS+MLGY KD EG++ MR++ WFYTGDIGV+H DGYLE+KDRSKDV+I GGENISS
Sbjct: 394 FRGGSVMLGYYKDPEGTAASMREDGWFYTGDIGVMHPDGYLEVKDRSKDVVICGGENISS 453
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
E+E+VLY NPAI E A+VA+ DK WG+ PCAFVSLK+ TE I EFC+ +LP Y
Sbjct: 454 TELEAVLYTNPAIKEAAVVAKPDKMWGETPCAFVSLKYH-DGSVTEREIREFCKTKLPKY 512
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
M ++V+ +ELPKT+TGKIQKF+LR++ ++
Sbjct: 513 MVPRNVVFLEELPKTSTGKIQKFLLRQMAKSL 544
>gi|242095442|ref|XP_002438211.1| hypothetical protein SORBIDRAFT_10g009610 [Sorghum bicolor]
gi|241916434|gb|EER89578.1| hypothetical protein SORBIDRAFT_10g009610 [Sorghum bicolor]
Length = 558
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 262/449 (58%), Positives = 325/449 (72%), Gaps = 15/449 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD--DVSA 58
N+ RLD + V+VLL HS KL+FVD S L AL P P+ +L+ D +
Sbjct: 93 NINTRLDARTVAVLLRHSGCKLVFVDPASLTLITDALKQLPHGHPAPRVILVEDPHEKGL 152
Query: 59 TSSPTV----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
++P G P F WV+P SEW+PM LNYTSGTTS PKGVVHCHRGLF+IT+
Sbjct: 153 PAAPAGSLTYERLLENGDPEFAWVRPASEWEPMILNYTSGTTSEPKGVVHCHRGLFLITL 212
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
SLI+W +P Q +LWTLPMFH NGWS+ WGMA VGGTN+CLR+VD +Y+ I GVT
Sbjct: 213 DSLIEWAVPPQATYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVDAGEVYATIAARGVT 272
Query: 169 HICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+CGA VVLNML+++P +PL V+ILT+GA PPAAVL RTES+GF VSH YGLTET
Sbjct: 273 HLCGAPVVLNMLANAPEVVRRPLPGKVRILTAGAPPPAAVLHRTESIGFEVSHGYGLTET 332
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
AG VV C+WK +WN L +ERARLK+RQGVRT G+A++D+V ETG SV DG + GEIV
Sbjct: 333 AGLVVCCSWKREWNKLPASERARLKSRQGVRTPGMAEVDIVDGETGRSVPRDGSTMGEIV 392
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
R G +MLGYL D + + +R++ WFYTGD+GV+H DGY+EI+DRSKDVIISGGENISS
Sbjct: 393 LRGGCVMLGYLNDDKATGAAIREDGWFYTGDVGVMHPDGYMEIRDRSKDVIISGGENISS 452
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPH 405
EVESVLY +PA+NE A+VA+ D FWG+ PCAFV LK S A +I +CR R+PH
Sbjct: 453 VEVESVLYSHPAVNEAAVVARPDDFWGETPCAFVGLKEGASAGAVTAADVIAWCRQRMPH 512
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLREI 434
YM ++V+ DELPKT+TGKIQK+VLR +
Sbjct: 513 YMVPRTVVFRDELPKTSTGKIQKYVLRNL 541
>gi|20799717|gb|AAM28621.1|AF503763_1 adenosine monophosphate binding protein 4 AMPBP4 [Arabidopsis
thaliana]
Length = 545
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 258/452 (57%), Positives = 336/452 (74%), Gaps = 16/452 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD--DVSA 58
N+ RLD +SVLL HSESKL+FVD+ S L L A+S P + P+ V+++D D+ +
Sbjct: 95 NINPRLDAHALSVLLRHSESKLVFVDHHLSSLVLEAVSFLPKDE-RPRLVILNDGNDMPS 153
Query: 59 TSSPTV------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
+SS + G FKWV+P+SEW PM LNYTSGTTSSPKGVVH HR +F+
Sbjct: 154 SSSADMDFLDTYEGFMERGDLRFKWVRPKSEWTPMVLNYTSGTTSSPKGVVHSHRSVFMS 213
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
T++SL+DW +PN+PV+LWTLPMFH NGWSY+W AAVG NIC+ +VDVP I+++I +
Sbjct: 214 TINSLLDWSLPNRPVYLWTLPMFHANGWSYTWATAAVGARNICVTRVDVPTIFNLIDKYQ 273
Query: 167 VTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
VTH+C A +VLNML++ P+ KPL PVK++T+GA PPA V+ + E+LGF VSH YG+TET
Sbjct: 274 VTHMCAAPMVLNMLTNHPAQKPLQSPVKVMTAGAPPPATVISKAEALGFDVSHGYGMTET 333
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G VVSCA K +W+ L ERA+ K+RQG+RT A++DV P +G SVKHDG + GEIV
Sbjct: 334 GGLVVSCALKPEWDRLEPDERAKQKSRQGIRTAVFAEVDVRDPISGKSVKHDGATVGEIV 393
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
FR GS+MLGY KD EG++ MR++ WFYTGDIGV+H DGYLE+KDRSKDV+I GGENISS
Sbjct: 394 FRGGSVMLGYYKDPEGTAASMREDGWFYTGDIGVMHPDGYLEVKDRSKDVVICGGENISS 453
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
E+E+VLY NPAI E A+VA+ DK WG+ PCAFVSLK+ TE I EFC+ +LP Y
Sbjct: 454 TELEAVLYTNPAIKEAAVVAKPDKMWGETPCAFVSLKYH-DGSVTEREIREFCKTKLPKY 512
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
M ++V+ +ELPKT+TGKIQKF+LR++ ++
Sbjct: 513 MVPRNVVFLEELPKTSTGKIQKFLLRQMAKSL 544
>gi|326498677|dbj|BAK02324.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 468
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 257/442 (58%), Positives = 318/442 (71%), Gaps = 14/442 (3%)
Query: 9 KRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT----- 63
+ VSVLL HS SKL+ VD P+ AL L P P+ VL+ D SP
Sbjct: 14 RTVSVLLRHSGSKLILVDPALVPVLGEALRLLPPGHPAPRVVLVEDPQEKDFSPAPAAAL 73
Query: 64 -------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+G P F+WV+P SEWDPM LNYTSGTTS+PKGVVHCHRG+F++T+ SL+ W +
Sbjct: 74 TYEKLLEMGDPEFRWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFVVTMDSLVSWSV 133
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P QP +LWTLPMFH NGWS+ WGMA VGGTN+CLR+VD +Y I GVTH+CGA VV
Sbjct: 134 PEQPTYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVDAAEVYDTIARRGVTHLCGAPVV 193
Query: 177 LNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
LNML+++P +PL V ILT+GA PPAAVL RTE++GF VSH YGLTETAG V+ CA
Sbjct: 194 LNMLANAPEGVQRPLPGKVHILTAGAPPPAAVLGRTEAIGFDVSHGYGLTETAGLVLLCA 253
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
WK +WN L +ERARLKARQGVRT G+A++D+V ETG SV DG + GEIV R G + +
Sbjct: 254 WKGEWNKLPASERARLKARQGVRTPGMAEVDIVDGETGRSVPRDGATMGEIVLRGGCVTM 313
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GY KD++ + +RD+ WFYTGD+GV+H DGYLEI+DRSKDVIISGGENISS EVES+LY
Sbjct: 314 GYFKDEDATRAAIRDDGWFYTGDVGVMHPDGYLEIRDRSKDVIISGGENISSVEVESLLY 373
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+NE A+VA+ D+FWG+ PCAFVSLK T +I + R R+P YM K+V+
Sbjct: 374 GHPAVNEAAVVARPDEFWGETPCAFVSLKEGAGGVVTAAEVIAWSRERMPGYMVPKTVVF 433
Query: 415 EDELPKTATGKIQKFVLREIVN 436
ELPKT+TGKIQK+VLR +
Sbjct: 434 RAELPKTSTGKIQKYVLRNLAK 455
>gi|297842499|ref|XP_002889131.1| hypothetical protein ARALYDRAFT_476888 [Arabidopsis lyrata subsp.
lyrata]
gi|297334972|gb|EFH65390.1| hypothetical protein ARALYDRAFT_476888 [Arabidopsis lyrata subsp.
lyrata]
Length = 531
Score = 524 bits (1350), Expect = e-146, Method: Compositional matrix adjust.
Identities = 248/452 (54%), Positives = 323/452 (71%), Gaps = 30/452 (6%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD +SVLL HSESKL+FVD+ S L L A+S P N P+ ++++D S
Sbjct: 95 NINPRLDAHALSVLLRHSESKLMFVDHHSRSLVLEAVSFLPKNE-RPRLIILNDRNDTPS 153
Query: 61 SPTV--------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
S + G P FKWV+P+SEW PM LNYTSGTTSSPKGVVH HR +F+
Sbjct: 154 STSADMDFLDTYEGVMERGDPCFKWVRPKSEWVPMVLNYTSGTTSSPKGVVHSHRSVFMS 213
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
T++SL+DW +PN PV+LWTLPMFH NGWSY+W AAVG TNIC+ +VD P I+++I +
Sbjct: 214 TINSLLDWSLPNCPVYLWTLPMFHANGWSYTWATAAVGATNICVTRVDAPTIFNLIDKYQ 273
Query: 167 VTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
VTH+C A +VLNML++ P KPL PVK++T+GA PPA V+ + ++LGF V H YG+TET
Sbjct: 274 VTHMCAAPMVLNMLTNYPGQKPLQSPVKVMTAGAPPPATVISKAKALGFDVGHGYGMTET 333
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G VVSCAWK +W+ L RA+LK+RQG++T A++DV P +G VKHDG + GEIV
Sbjct: 334 GGLVVSCAWKPEWDRLEPDARAKLKSRQGIKTAVFAEVDVRDPLSGKGVKHDGATVGEIV 393
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
F+ GS+MLGY KD EG++ MR++ WFYTGDIGV+H DGYLE+KDRSKDV+I GGENISS
Sbjct: 394 FKGGSVMLGYYKDPEGTAASMREDRWFYTGDIGVMHPDGYLEVKDRSKDVVICGGENISS 453
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
E+E+VLY NPAI E A+VA+ DK WG+ PCAF+ EFC+ +LP Y
Sbjct: 454 MELEAVLYTNPAIKEAAVVAKPDKMWGETPCAFIR---------------EFCKTKLPKY 498
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
M ++V+ +ELPKT+TGKIQKF+LR+I ++
Sbjct: 499 MVPRNVVFLEELPKTSTGKIQKFLLRQIAKSL 530
>gi|242092676|ref|XP_002436828.1| hypothetical protein SORBIDRAFT_10g009600 [Sorghum bicolor]
gi|241915051|gb|EER88195.1| hypothetical protein SORBIDRAFT_10g009600 [Sorghum bicolor]
Length = 552
Score = 524 bits (1349), Expect = e-146, Method: Compositional matrix adjust.
Identities = 253/446 (56%), Positives = 314/446 (70%), Gaps = 12/446 (2%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD + V+VLL HS SKL+FVD S L AL L P P+ + + D
Sbjct: 93 NINTRLDARTVAVLLRHSGSKLVFVDASSLQLISDALRLLPPGHPAPRVIPVEDPHEEDE 152
Query: 61 SPTV----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
P G P F WVQP SEWDPM LNYTSGTTS PKGVVHCHRGLF+ITV S
Sbjct: 153 FPADTLTYERLLADGDPEFAWVQPASEWDPMVLNYTSGTTSEPKGVVHCHRGLFLITVDS 212
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
L++W +P +P +LWTLPMFH NGWS+ WGMA VGGTN+CLR+V+ +Y+ I GVTH+
Sbjct: 213 LMEWAVPTRPTYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVNAATVYAAIASRGVTHL 272
Query: 171 CGALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
C A VVLNML+++ +PL V+I T+GA PPAAVL RTE++GF +SH YGLTETAG
Sbjct: 273 CCAPVVLNMLANAHDGVRRPLPGKVRIRTAGAPPPAAVLQRTEAIGFEISHGYGLTETAG 332
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
VSC WK +W++L ERARLKARQGVRT +DV+ ETG SV DG + GEIV R
Sbjct: 333 LPVSCTWKGEWDSLPAPERARLKARQGVRTPATGKVDVIDSETGRSVPRDGATMGEIVVR 392
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
G +MLGYL D E + +R++ WFYTGD+GV+H DGYLEI+DRSKDVII+ GENISS E
Sbjct: 393 GGCVMLGYLNDDEATKAAIREDGWFYTGDVGVMHPDGYLEIRDRSKDVIINAGENISSVE 452
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VESVLY +PA+NE A+VA+ D+ G+ PCAFVSLK + + T +I +CR R+P YM
Sbjct: 453 VESVLYDHPAVNEAAVVARPDELRGETPCAFVSLKEDAAGTVTAADVIAWCRERMPQYMV 512
Query: 409 HKSVIIEDELPKTATGKIQKFVLREI 434
++V+ ELPKT+TGKIQK+VLR +
Sbjct: 513 PRTVVFHAELPKTSTGKIQKYVLRNL 538
>gi|357166712|ref|XP_003580813.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 576
Score = 509 bits (1312), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/461 (56%), Positives = 326/461 (70%), Gaps = 30/461 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--------- 55
RLD + VSVLL HS SKL+FVD SPL AL L P + P +L+ D
Sbjct: 97 RLDARTVSVLLRHSGSKLVFVDPAFSPLLHEALCLLPPDHPPPLVILVEDPHEKKEQFPP 156
Query: 56 ------VSATSSPTV---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
+S T + G P F WV+PESEWDPM LNYTSGTTS+PKGVVHCHR +F++
Sbjct: 157 VPASMAISTTYERLLEERGDPEFAWVRPESEWDPMVLNYTSGTTSAPKGVVHCHRAIFLV 216
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
T+ SL+ W +P +P +LWTLPMFH NGWS+ WGMA GGTN+CLR+VD +Y+ I H
Sbjct: 217 TLDSLVSWGVPERPTYLWTLPMFHANGWSFPWGMAVAGGTNVCLRRVDAREVYAAIAQHR 276
Query: 167 VTHICGALVVLNMLSSSPST--KPLDR---PVKILTSGASPPAAVLLRTESLGFVVSHSY 221
V+H+CGA VVLNML+++P + +PL V+ILT+GA PPAAVL RTE+LGF VSH Y
Sbjct: 277 VSHLCGAPVVLNMLANAPESARRPLPEGAHKVRILTAGAPPPAAVLGRTEALGFDVSHGY 336
Query: 222 GLTETAGFVVSCAWKS-QWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQ 280
GLTETAG V+SCAWK QWN L +ERARLKARQGVRT G+A++D+V TG SV DG
Sbjct: 337 GLTETAGLVISCAWKGDQWNKLPASERARLKARQGVRTPGMAEVDIVDAVTGRSVPRDGA 396
Query: 281 SQGEIVFRSGSIMLGYLKDQEGSSLCMR-----DNDWFYTGDIGVVHSDGYLEIKDRSKD 335
+ GEIV R G + LGY KD+ + +R + WFYTGD+GV+H DGYLEI+DRSKD
Sbjct: 397 TMGEIVLRGGCLTLGYYKDEAATRAAIRGTGAGEEGWFYTGDVGVMHPDGYLEIRDRSKD 456
Query: 336 VIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAI 395
VIISGGENISS EVE+VLY +PA++E A+VA+ D+FWG+ PCAF+SLK + T E +
Sbjct: 457 VIISGGENISSVEVEAVLYGHPAVDEAAVVARPDEFWGETPCAFLSLK-KKGVNVTAEEV 515
Query: 396 IEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVN 436
I + R R+ YM K+V+ DELPKT+TGK+QKFVLR + +
Sbjct: 516 IAWSRERMAGYMVPKTVVFRDELPKTSTGKVQKFVLRNMAS 556
>gi|222629764|gb|EEE61896.1| hypothetical protein OsJ_16604 [Oryza sativa Japonica Group]
Length = 540
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 242/437 (55%), Positives = 296/437 (67%), Gaps = 36/437 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + VSVLL HS SKL+FVD P+ AL L P+ P+ VL+ D P
Sbjct: 98 RLDARTVSVLLRHSGSKLIFVDPALLPVLRDALRLLPAGHTAPRVVLVEDPHEKEFPPAP 157
Query: 65 ------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F WV+P SEWDPM LNYTSGTTS+PKGVVHCHRG+F+ITV SL+
Sbjct: 158 AAALTYERLVEKGDPEFAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLITVDSLV 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
DW +P +P +LWTLPMFH NGWS+ WGMA VGGTN+CLR+VD ++ I GV H+CG
Sbjct: 218 DWAVPPRPTYLWTLPMFHANGWSFPWGMAVVGGTNVCLRRVDAAEVFDTIARRGVNHLCG 277
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VVLNML+++P KPL V+ILT+GA PPAAVL RTE++GF VSH YGLTETAG V
Sbjct: 278 APVVLNMLANAPEGVRKPLPGKVRILTAGAPPPAAVLYRTEAIGFEVSHGYGLTETAGLV 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+SCAWK +W+ L +ERARLKARQGVRT G+A++DVV ETG SV DG + GEIV R G
Sbjct: 338 LSCAWKGEWDKLPASERARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMGEIVLRGG 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
I LGYL D+ + +RDN WFYTGD+GV+H DG EVE
Sbjct: 398 CITLGYLNDEAATKAAIRDNGWFYTGDVGVMHPDG---------------------VEVE 436
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SVLY +PA+NE A+VA+ D+FWG+ PCAFVSLK + T ++ + R R+P YM K
Sbjct: 437 SVLYGHPAVNEAAVVARPDEFWGETPCAFVSLK-QGGGAVTAADVVAWSRERMPRYMVPK 495
Query: 411 SVIIEDELPKTATGKIQ 427
+VI DELPKT+TGKI+
Sbjct: 496 TVIFRDELPKTSTGKIR 512
>gi|218195816|gb|EEC78243.1| hypothetical protein OsI_17900 [Oryza sativa Indica Group]
Length = 502
Score = 452 bits (1162), Expect = e-124, Method: Compositional matrix adjust.
Identities = 232/442 (52%), Positives = 283/442 (64%), Gaps = 67/442 (15%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD + VSVLL HS SKL+FVD P+ AL L P+ P+ VL+ D P
Sbjct: 98 RLDARTVSVLLRHSGSKLIFVDPALLPVLRDALRLLPAGHTAPRVVLVEDPHEKEFPPAP 157
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F WV+P SEWDPM LNYTSGTTS+PKGVVHCHRG+F+ITV SL+
Sbjct: 158 AAALTYERLVEKGDPEFAWVRPASEWDPMILNYTSGTTSAPKGVVHCHRGIFLITVDSLV 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
DW +P +P +LWTLPMFH NGWS+ WGMA VGG T++C
Sbjct: 218 DWAVPPRPTYLWTLPMFHANGWSFPWGMAVVGG----------------------TNVC- 254
Query: 173 ALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
L + ++ E++GF VSH YGLTETAG V+S
Sbjct: 255 ----LRRVDAA---------------------------EAIGFEVSHGYGLTETAGLVLS 283
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAWK +W+ L +ERARLKARQGVRT G+A++DVV ETG SV DG + GEIV R G I
Sbjct: 284 CAWKGEWDKLPASERARLKARQGVRTPGMAEVDVVDGETGRSVPRDGSTMGEIVLRGGCI 343
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
LGYL D+ + +RDN WFYTGD+GV+H DGY+EI+DRSKDVIISGGENISS EVESV
Sbjct: 344 TLGYLNDEAATKAAIRDNGWFYTGDVGVMHPDGYVEIRDRSKDVIISGGENISSVEVESV 403
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+NE A+VA+ D+FWG+ PCAFVSLK + T ++ + R R+P YM K+V
Sbjct: 404 LYGHPAVNEAAVVARPDEFWGETPCAFVSLK-QGGGAVTAADVVAWSRERMPRYMVPKTV 462
Query: 413 IIEDELPKTATGKIQKFVLREI 434
I DELPKT+TGKIQK+VLR I
Sbjct: 463 IFRDELPKTSTGKIQKYVLRNI 484
>gi|406821147|gb|AFS60176.1| cinnamate:CoA ligase [Hypericum calycinum]
Length = 572
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/451 (49%), Positives = 303/451 (67%), Gaps = 25/451 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L HSE+KL FVDYQ LA ALS S + V++ DDV + +
Sbjct: 97 RLDAKNIATILRHSEAKLFFVDYQLLDLAREALSGMESTPL----VVLIDDVDKPTG--I 150
Query: 65 GHPNFKWVQ----------PES---EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G ++ Q P+ EWDP+ALNYTSGTTS+PKGVV+ HRG ++ T+S +
Sbjct: 151 GRHGLEYEQLIKRGRSDFAPDELVDEWDPIALNYTSGTTSAPKGVVYSHRGAYLSTLSLI 210
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N+PV+LW+LPMFH NGW+++WG+AA GGTN+C+R +Y I +HGVTH+C
Sbjct: 211 LGWEMGNEPVYLWSLPMFHCNGWTFTWGIAARGGTNVCIRNTTAEDMYRNIANHGVTHMC 270
Query: 172 GALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
A +V N+L + S + +P+ RPV++LT GA PP ++L + E LGF ++H+YGLTE G
Sbjct: 271 CAPIVFNILLEAGSEARRPITRPVQVLTGGAPPPESLLAKMEPLGFKITHAYGLTEATGP 330
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
+ C W++QW+ L ++A+LKARQGV + LAD DV + T SV DG++ GEIV R
Sbjct: 331 ALVCEWQAQWDGLPKGDQAKLKARQGVSILTLADADVKNLATMESVPRDGKTMGEIVLRG 390
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
SIM+GY KDQE +S + N WF TGD+GVVH DGY+EIKDRSKDVIISGGENISS EV
Sbjct: 391 SSIMMGYYKDQETTSKAFK-NGWFATGDVGVVHPDGYIEIKDRSKDVIISGGENISSVEV 449
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK--WELSKKPTEEA-IIEFCRARLPHY 406
ESVLY +P + E A+VA + WG+ PCAFV+++ + S+ +E I+ FCRA +PH+
Sbjct: 450 ESVLYKHPRVLEAAVVAMPSEKWGESPCAFVAIRKNEKGSRNDVKEVDILRFCRANMPHF 509
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
M K V ELPK +T KI K LR++ A
Sbjct: 510 MVPKRVAFLAELPKNSTNKILKAQLRDMAKA 540
>gi|225466273|ref|XP_002272437.1| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
Length = 588
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 221/458 (48%), Positives = 302/458 (65%), Gaps = 26/458 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN--------TILPKPVLIHDDV 56
RLD ++ +L HSE+K+ FVDYQ PLA AL L + + +P V++ DD+
Sbjct: 97 RLDAHNIATILGHSEAKVFFVDYQYVPLAREALLLLMAQHKEKLVAESSIPL-VIVIDDI 155
Query: 57 SATSSPTVG-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
+ +G +P + V+ E EWDP+ALNYTSGTTS+PKGVV+ HRG ++
Sbjct: 156 DTPTGVRLGELEYEQLVANGNPGYAPVEVEDEWDPIALNYTSGTTSAPKGVVYSHRGAYL 215
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
T+S L+ W + +PV++W+LPMFH NGW+++WG+AA GGT++C+R +Y I H
Sbjct: 216 STLSLLLGWEMGGEPVYMWSLPMFHCNGWTFTWGVAARGGTSVCIRNTTAYDMYRNIALH 275
Query: 166 GVTHICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
VTH+C A +V N+L + + L PV+ILT GA PPA +L + E+LGF V H+YGL
Sbjct: 276 NVTHMCCAPIVFNILLEAKENERQRLKTPVQILTGGAPPPAPLLEKIEALGFHVVHAYGL 335
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TE G + C W+++WN L +A+LKARQG+ + LAD+DV +P+T SV DG+S G
Sbjct: 336 TEATGPALVCEWQAEWNRLPRDHQAKLKARQGISILTLADVDVKNPDTMASVPRDGKSMG 395
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R SIM GY KD E +S + N WF+TGD+GV+H DGYLEIKDRSKDVIISGGEN
Sbjct: 396 EIVLRGSSIMKGYFKDPEATSKAFK-NGWFFTGDVGVIHPDGYLEIKDRSKDVIISGGEN 454
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP---TEEAIIEFCR 400
ISS EVES+LY +P + E A+VA WG+ PCAF+++ + + +E+ II++CR
Sbjct: 455 ISSVEVESILYRHPRVLEAAVVAMPHPKWGESPCAFITINKNQTGQNDDVSEDDIIQYCR 514
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
LP YM K V I ++LPKTATGKIQKF LR + +
Sbjct: 515 KNLPRYMIPKKVEIMEQLPKTATGKIQKFELRTLAKTL 552
>gi|115480603|ref|NP_001063895.1| Os09g0555800 [Oryza sativa Japonica Group]
gi|113632128|dbj|BAF25809.1| Os09g0555800 [Oryza sativa Japonica Group]
gi|125606588|gb|EAZ45624.1| hypothetical protein OsJ_30291 [Oryza sativa Japonica Group]
Length = 577
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/452 (48%), Positives = 295/452 (65%), Gaps = 23/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-------PSNTILPKPVLIH-DDV 56
RLD V+ ++ H+E K+LFVDYQ +A AL P P+L+ DD
Sbjct: 97 RLDAANVAAIVRHAEPKVLFVDYQFIRVATDALKAVMGDGDGDGGEVRAPLPLLVVIDDA 156
Query: 57 SATSSPTVGHPNFKWV-----------QP-ESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
+ VG ++ + +P E EWD +ALNYTSGTTS+PKGVV+ HRG +
Sbjct: 157 DKPTGARVGELEYEQLVARGDPARYPPRPVEDEWDAVALNYTSGTTSAPKGVVYSHRGAY 216
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ T+ L+ W + ++PV+LW+LPMFH NGW+++WG+AA GGTN+C+R +Y+
Sbjct: 217 LNTMGLLLQWGVGHEPVYLWSLPMFHCNGWTFTWGVAARGGTNVCIRAPTADAMYAAFAA 276
Query: 165 HGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
HGVTH+C A V+ N+L +PL RPV++LT GA PPAA+L R E LGF V+H+YG+T
Sbjct: 277 HGVTHMCAAPVLFNILLDGACREPLRRPVEVLTGGAPPPAALLERVERLGFHVTHAYGMT 336
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
E G V+ C W+ QW+ L +ERARLKARQGV + LAD DV +T SV DG + GE
Sbjct: 337 EATGVVMVCEWREQWDALPPSERARLKARQGVSALTLADADVKDLKTMESVPRDGATMGE 396
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
+V R ++M GY K+ ++ RD WF TGD+GVVH DGY+EIKDRSKDVIISGGENI
Sbjct: 397 VVLRGSNVMKGYFKNPRATADAFRDG-WFLTGDVGVVHPDGYVEIKDRSKDVIISGGENI 455
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWEL--SKKPTEEAIIEFCRAR 402
SS EVE+ LY +PA+ E A+VA WG+ PCAFV+LK E + + +E+ ++ FCR R
Sbjct: 456 SSVEVEAALYQHPAVREAAVVAMPHPHWGETPCAFVALKREFAGAGEVSEQEVVSFCRNR 515
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
+ HYM + V+ DELPK +TGK+QK LR++
Sbjct: 516 MAHYMVPRKVVFVDELPKNSTGKVQKLALRDM 547
>gi|357159975|ref|XP_003578618.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 572
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 221/448 (49%), Positives = 291/448 (64%), Gaps = 20/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-----PSNTILPKPVLIH-DDVSA 58
RLD V+ ++ H++ KLLFVDYQ LA ALS + T P+L+ DD+
Sbjct: 97 RLDASGVAAIVKHADPKLLFVDYQYIRLATDALSSILAAADSTGTAAALPLLVVIDDIEN 156
Query: 59 TSSPTVGHPNFKWV-----------QP-ESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
+ VG ++ + +P E EWD +ALNYTSGTTSSPKGVV+ HRG ++
Sbjct: 157 PTGLRVGELEYEQLVARGDPAQHPPRPVEDEWDAVALNYTSGTTSSPKGVVYSHRGAYLS 216
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
TV L+ W + ++PVFLW+LPMFH NGW+++WG+AA GG N+C+R +YS + HG
Sbjct: 217 TVGLLLQWGVAHEPVFLWSLPMFHCNGWTFTWGVAARGGANVCVRAPTAQAMYSAVVAHG 276
Query: 167 VTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
VTH+C A V+ N+L PL R V++LT GA PPAA+L R E LGF V+H+YG+TE
Sbjct: 277 VTHMCAAPVLFNVLLDDAPPAPLPRRVEVLTGGAPPPAALLERVEKLGFHVTHAYGMTEA 336
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G + C W+ +W+ L ERA LKARQGV + LA V +T SV DG + GEIV
Sbjct: 337 TGPAMVCEWRERWDALPPPERALLKARQGVSALSLAGAGVKDLQTMASVPRDGATMGEIV 396
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
R S+M GY KD + ++ R WF TGD+GVVH DGY+EIKDRSKDVIISGGENISS
Sbjct: 397 LRGSSVMKGYYKDPKATAAAFRAG-WFLTGDVGVVHPDGYVEIKDRSKDVIISGGENISS 455
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSK-KPTEEAIIEFCRARLPH 405
EVE+ LY +PA+ E A+VA + WG+ PCAFV+LK E S + +EE ++ FCR ++ H
Sbjct: 456 VEVEAALYGHPAVREAAVVAMPHRHWGETPCAFVALKKEFSAGEVSEEEVVSFCRNKMAH 515
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLRE 433
+M + V+ DELPK ATGK+QK LRE
Sbjct: 516 FMVPRKVVFMDELPKNATGKVQKLALRE 543
>gi|356569404|ref|XP_003552891.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 597
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/458 (48%), Positives = 297/458 (64%), Gaps = 30/458 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP--KPVLIHDDVSATSSP 62
RLD K ++ +L HSE+K+ FVDY+ A AL L + K V++ DD++ +
Sbjct: 97 RLDAKNIATILRHSEAKVFFVDYEYVSKAKEALRLLMDDNNNNNLKKVIVIDDINTPTRI 156
Query: 63 TVG-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
+G +PN+ + EW P+ALNYTSGTTS PKGVV+ HRG ++ T+S +
Sbjct: 157 RLGELEYEQMVHHGNPNYFPEGIQDEWTPIALNYTSGTTSEPKGVVYSHRGAYLSTLSLI 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + ++PV+LWTLPMFH NGW+++WG+AA GGTN+CLR IY I H VTH+C
Sbjct: 217 LGWEMGSEPVYLWTLPMFHCNGWTFTWGVAARGGTNVCLRTTAARDIYRNIVVHNVTHMC 276
Query: 172 GALVVLNMLSSSPSTKPLD---------RPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
A +V N++ + ++ +D PV+ILT GA PPA++L + ESLGF V+H+YG
Sbjct: 277 CAPIVFNIILEAKQSERIDIKVINGKRKSPVEILTGGAPPPASLLEQIESLGFHVTHAYG 336
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTE G + C WK +WN L E+A+LKARQGV + +AD+DV + ET SV DG++
Sbjct: 337 LTEATGPALVCEWKKEWNMLPKKEQAQLKARQGVSVLTMADVDVKNLETMESVARDGRTM 396
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCM-RDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GEIV + IM+GY KD + SS ++ DWF TGD+GV+H DGYLEIKDRSKDVIISGG
Sbjct: 397 GEIVLKGSGIMMGYFKDHKASSKAFGKNGDWFKTGDVGVIHPDGYLEIKDRSKDVIISGG 456
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP-------TEEA 394
ENISS EVES+LY +P + E A+VA WG+ PCAFVSL+ + TE
Sbjct: 457 ENISSVEVESLLYKHPRVLEAAVVAMPHPRWGETPCAFVSLRKNNNNSSSSKIDDVTEAE 516
Query: 395 IIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
II +CR LPH+M K V +ELPKT+TGKIQKF LR
Sbjct: 517 IIAYCRKNLPHFMVPKVVKFMEELPKTSTGKIQKFELR 554
>gi|125564660|gb|EAZ10040.1| hypothetical protein OsI_32344 [Oryza sativa Indica Group]
Length = 577
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/452 (48%), Positives = 296/452 (65%), Gaps = 23/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIH-DDV 56
RLD V+ ++ H+E K+LFVDYQ +A AL + P P+L+ DD
Sbjct: 97 RLDAANVAAIVRHAEPKVLFVDYQFIRVATDALKAVMGDGDGDGGVVRAPLPLLVVIDDG 156
Query: 57 SATSSPTVGHPNFKWV-----------QP-ESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
+ VG ++ + +P E EWD +ALNYTSGTTS+PKGVV+ HRG +
Sbjct: 157 DKPTGARVGELEYEQLVARGDPARYPPRPVEDEWDAVALNYTSGTTSAPKGVVYSHRGAY 216
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ T+ L+ W + ++PV+LW+LPMFH NGW+++WG+AA GGTN+C+R +Y+
Sbjct: 217 LNTMGLLLQWGVGHEPVYLWSLPMFHCNGWTFTWGVAARGGTNVCIRAPTADAMYAAFAA 276
Query: 165 HGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
HGVTH+C A V+ N+L +PL RPV++LT GA PPAA+L R E LGF V+H+YG+T
Sbjct: 277 HGVTHMCAAPVLFNILLDGACREPLRRPVEVLTGGAPPPAALLERVERLGFHVTHAYGMT 336
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
E G V+ C W+ QW+ L +ERARLKARQGV + LAD DV +T SV DG + GE
Sbjct: 337 EATGVVMVCEWREQWDALPPSERARLKARQGVSALTLADADVKDLKTMESVPRDGATMGE 396
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
+V R ++M GY K+ ++ RD WF TGD+GVVH DGY+EIKDRSKDVIISGGENI
Sbjct: 397 VVLRGSNVMKGYFKNPRATADAFRDG-WFLTGDVGVVHPDGYVEIKDRSKDVIISGGENI 455
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWEL--SKKPTEEAIIEFCRAR 402
SS EVE+ LY +PA+ E A+VA WG+ PCAFV+LK E + + +E+ ++ FCR R
Sbjct: 456 SSVEVEAALYQHPAVREAAVVAMPHPHWGETPCAFVALKREFAGAGEVSEQEVVSFCRNR 515
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
+ HYM + V+ DELPK +TGK+QK LR++
Sbjct: 516 MAHYMVPRKVVFVDELPKNSTGKVQKLALRDM 547
>gi|255561377|ref|XP_002521699.1| AMP dependent ligase, putative [Ricinus communis]
gi|223539090|gb|EEF40686.1| AMP dependent ligase, putative [Ricinus communis]
Length = 544
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 224/449 (49%), Positives = 301/449 (67%), Gaps = 21/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
R D VS+LL HSE+K++FVD+Q +A AL L +NT P+++ S SPT
Sbjct: 97 RYDSNMVSILLDHSEAKIIFVDFQLLDVASKALELL-ANTERKSPIVVLISESDGLSPTG 155
Query: 64 -------------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G+ F+ +P++EWDP+++NYTSGTTS PKGVV+ HRG ++ ++++
Sbjct: 156 FTSNTYEYESLLANGNKGFEIRRPKNEWDPISVNYTSGTTSRPKGVVYSHRGAYLNSLAT 215
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+ I PV+LWT+PMFH NGW +WG+AA GGTNIC+RKV I+ I H VTH+
Sbjct: 216 VFLHGIGAMPVYLWTVPMFHCNGWCLTWGVAAQGGTNICIRKVTPKAIFDSIGQHNVTHM 275
Query: 171 CGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
GA VLNM+ +SP + + L V+I+T GA PP ++ + E LGF VSH YGLTET G
Sbjct: 276 GGAPTVLNMIVNSPVSDRRTLPHKVEIMTGGAPPPPQIIFKMEELGFGVSHLYGLTETYG 335
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CAWK +W++L ERA+LKARQG+ +GL D+DV P T SV DG++ GEIVFR
Sbjct: 336 PGTYCAWKPEWDSLPPDERAKLKARQGIHHLGLEDVDVRDPMTQESVPADGKTIGEIVFR 395
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M GYLKD + + + WF +GD+ V H DGY+E+KDR KD+IISGGENIS+ E
Sbjct: 396 GNTVMSGYLKDLKATEEAFQ-GGWFRSGDLAVKHPDGYIEVKDRLKDIIISGGENISTVE 454
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE+VLY +PAI E A+VA+ D WG+ PCAFV LK +E+ II+FCR RLPHYMA
Sbjct: 455 VETVLYSHPAIFEAAVVARPDDHWGQTPCAFVKLKEGFVV--SEQDIIKFCRDRLPHYMA 512
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNA 437
++VI ED LP+T+TGK+QKF+LR+ A
Sbjct: 513 PRTVIFED-LPRTSTGKVQKFILRQKAKA 540
>gi|255561371|ref|XP_002521696.1| AMP dependent ligase, putative [Ricinus communis]
gi|223539087|gb|EEF40683.1| AMP dependent ligase, putative [Ricinus communis]
Length = 480
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/445 (50%), Positives = 295/445 (66%), Gaps = 21/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
R D VSVLL HSE+ ++FVDYQ +A AL L + P+++ S SPT
Sbjct: 33 RYDSNMVSVLLEHSEANIIFVDYQLLDVASKALDLL-TKRERKSPIMVLISESDGLSPTG 91
Query: 64 -------------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G+ F+ +P+SEWDP+ +NYTSGTTS PKGVV HRG ++ ++++
Sbjct: 92 FTSNTYEYESLLATGNKGFEIRRPKSEWDPITVNYTSGTTSRPKGVVFSHRGAYLNSLAT 151
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ PV+LWT+PMFH NGW +WGMAA GGTNIC+RKV I+ I H VTH+
Sbjct: 152 VLLHGTGAMPVYLWTVPMFHSNGWCLTWGMAAQGGTNICIRKVTPNAIFDSIGQHNVTHM 211
Query: 171 CGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
GA VLNM+ +SP + + L V+I+T GA PP ++ + E LGF VSH YGLTET G
Sbjct: 212 GGAPTVLNMIVNSPVSDRRTLPHKVEIMTGGAPPPPQIIFKMEELGFGVSHLYGLTETYG 271
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CAWK +W++L ERA++KARQG+ +GL D+DV P T SV DG++ GE+VFR
Sbjct: 272 PGTYCAWKPEWDSLPPDERAKVKARQGIHHLGLEDVDVRDPMTQESVPADGKTIGEVVFR 331
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+IM GYLKD + + + WF +GD+ V H DGY+E+KDR KD+IISGGENIS+ E
Sbjct: 332 GNTIMSGYLKDLKATEEAFQ-GGWFRSGDLAVKHPDGYIEVKDRLKDIIISGGENISTVE 390
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE+VLY +PAI E A+VA+ D WG+ PCAFV LK +E+ II+FCR RLPHYMA
Sbjct: 391 VETVLYSHPAIFEAAVVARPDDHWGQTPCAFVKLKEGFVV--SEQDIIKFCRDRLPHYMA 448
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++VI ED LP+T+TGK+QKF+LRE
Sbjct: 449 PRTVIFED-LPRTSTGKVQKFILRE 472
>gi|356539777|ref|XP_003538370.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 620
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/483 (46%), Positives = 298/483 (61%), Gaps = 50/483 (10%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI------LPKPVLIHDDVSA 58
RLD K ++ +L HSE+K+ FVDY+ A AL L N +PKP I+ S
Sbjct: 97 RLDAKNIATILRHSEAKVFFVDYEYVSKAKDALRLLMDNNNNNNNKGVPKPTTINQQNST 156
Query: 59 TSSPTV-------------------------GHPNFKWVQPESEWDPMALNYTSGTTSSP 93
S P V G+PN+ + + EW P+ALNYTSGTTS P
Sbjct: 157 FSLPLVIVIDDINTPTGIRLGELEYEQMVHHGNPNYVPEEIQDEWTPIALNYTSGTTSEP 216
Query: 94 KGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKV 153
KGVV+ HRG ++ T+S ++ W + ++PV+LWTLPMFH NGW+++WG+AA GGTN+CLR
Sbjct: 217 KGVVYSHRGAYLSTLSLILGWEMGSEPVYLWTLPMFHCNGWTFTWGLAARGGTNVCLRTT 276
Query: 154 DVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLD------RPVKILTSGASPPAAVL 207
IYS I H VTH+C A +V N++ + ++ +D PV+ILT GA PPA++L
Sbjct: 277 AARDIYSNIVLHNVTHMCCAPIVFNIILEAKQSEKIDIKLKRNSPVEILTGGAPPPASLL 336
Query: 208 LRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVV 267
+ ESLGF V+H+YGLTE G + C W+ +WN L E+A+LKARQGV + +A +DV
Sbjct: 337 EQIESLGFHVTHAYGLTEATGPALVCEWQKEWNMLPKKEQAQLKARQGVSVLTMAGVDVK 396
Query: 268 HPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCM-----RDNDWFYTGDIGVVH 322
+ +T SV DG++ GEIV + IM+GY KD E +S DWF TGD+GV+H
Sbjct: 397 NLDTMESVPKDGRTMGEIVLKGSGIMMGYFKDHEATSKAFFGSNNSKGDWFRTGDVGVIH 456
Query: 323 SDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL 382
DGYLEIKDRSKDVIISGGENISS EVES+LY +P + E A+VA WG+ PCAFVSL
Sbjct: 457 PDGYLEIKDRSKDVIISGGENISSVEVESLLYRHPRVLEAAVVAMPHPRWGESPCAFVSL 516
Query: 383 KWELSKKP--------TEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
+ + TE II +CR LPH+M K V +ELPKT+TGKIQKF LR +
Sbjct: 517 RKNNNNNNSSKKIDHVTEAEIIAYCRKNLPHFMVPKVVKFMEELPKTSTGKIQKFELRVM 576
Query: 435 VNA 437
A
Sbjct: 577 AKA 579
>gi|326515982|dbj|BAJ88014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 567
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 219/444 (49%), Positives = 289/444 (65%), Gaps = 19/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD V+ +L H+ KLLF+DYQ +A AL +T LP V+I DD+ A + +
Sbjct: 97 RLDAAGVATILRHAAPKLLFIDYQYIRVATDALKSM-MDTALPLLVVI-DDIEAPTGARL 154
Query: 65 GHPNFKWVQPES------------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G ++ + EWD +ALNYTSGTTS+PKGVV+ HRG ++ TV L+
Sbjct: 155 GELEYEGLVARGDPGRHPPREVVDEWDAVALNYTSGTTSAPKGVVYSHRGAYLSTVGLLL 214
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + ++PV+LW+LPMFH NGW+++WG+AA GG N+C+R +YS I HGVTH+C
Sbjct: 215 QWGVGHEPVYLWSLPMFHCNGWTFTWGIAARGGANVCVRAPTADAMYSAITDHGVTHMCV 274
Query: 173 ALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
A V+ N+L ++ PL R V++LT GA PPAA+L R E LGF V+H+YG+TE G +
Sbjct: 275 APVLFNVLLNA-HRDPLPRAVEVLTGGAPPPAALLERVERLGFHVTHAYGMTEATGPAMV 333
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C W+ +W+ L ERA LKARQGV I LA DV +T +SV DG + GEIV R S+
Sbjct: 334 CEWRERWDALPAPERAALKARQGVSAISLAGADVKDLKTMVSVPRDGTTLGEIVLRGSSV 393
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GY K+ E + R WF TGD+GVVH DGY+EIKDRSKDVIISGGENISS EVE+
Sbjct: 394 MKGYYKNPEATDAAFR-GGWFLTGDVGVVHPDGYVEIKDRSKDVIISGGENISSVEVEAA 452
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWEL---SKKPTEEAIIEFCRARLPHYMAH 409
LY +PA+ E A+VA WG+ PCAFV+LK E + + EE ++ FCR+++ H+M
Sbjct: 453 LYGHPAVQEAAVVAMPHPHWGEVPCAFVTLKKEFDSGAGEVNEEELVAFCRSKMAHFMVP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
V+ DELPK ATGK+QK LRE
Sbjct: 513 GKVVFVDELPKNATGKVQKLALRE 536
>gi|224084042|ref|XP_002307202.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222856651|gb|EEE94198.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 570
Score = 426 bits (1095), Expect = e-116, Method: Compositional matrix adjust.
Identities = 223/450 (49%), Positives = 298/450 (66%), Gaps = 19/450 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-PSNTILPKPVLIHD-DVSATSSP 62
R D VS+LL HSE+K++FVD+Q +A AL L + T P VLI + DVS+ +
Sbjct: 123 RHDSNMVSILLKHSEAKIIFVDHQLLDIARGALDLLEKTGTKPPMVVLISESDVSSPTGF 182
Query: 63 TV-----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
+ GH F+ QPESEWDP+++NYTSGTTS PKGVV+ HRG ++ T+++L
Sbjct: 183 SSSSYEYESLLANGHSGFEIRQPESEWDPISVNYTSGTTSRPKGVVYSHRGAYLNTLATL 242
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I PV+LWT+PMFH NGW +WGMAA GG N+CLRKV I+ I H VTH+
Sbjct: 243 FLHGIGTTPVYLWTVPMFHCNGWCLTWGMAAQGGANVCLRKVSPKDIFDSIDQHKVTHMA 302
Query: 172 GALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA VL+M+ S+ KPL V+I+T GA PP + + E LGF VSH YGLTET G
Sbjct: 303 GAPTVLSMIVNSAVSDKKPLPHKVEIMTGGAPPPPQIFFKMEKLGFGVSHLYGLTETYGP 362
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C+WK +W++L ER+++KARQGV+ +GL D+DV T SV DG++ GEI+ R
Sbjct: 363 GTYCSWKPEWDSLPLNERSKMKARQGVQHLGLEDVDVKDTFTMESVPADGKTIGEIMLRG 422
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLKD + + R WF +GD+ V HSDGY+E+KDR+KD++I+GGEN+ + EV
Sbjct: 423 NTVMSGYLKDSKATEDAFR-GGWFRSGDLAVKHSDGYIEVKDRAKDIVITGGENVCTLEV 481
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E+VLY +PAI EVA+V + D WG+ PCAFV L+ + II+FCR RLPHYMA
Sbjct: 482 ETVLYNHPAILEVAVVGRPDDLWGQTPCAFVKLREGFDVDAQD--IIKFCRDRLPHYMAP 539
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAVN 439
K+VI ED LP+ +TGK+QKF+LRE A+
Sbjct: 540 KTVIFED-LPRNSTGKVQKFILREKAKALG 568
>gi|224065064|ref|XP_002301652.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222843378|gb|EEE80925.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 586
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 216/446 (48%), Positives = 287/446 (64%), Gaps = 19/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L HS +K+ FVDYQ LA ALS + +P + DD+ +
Sbjct: 97 RLDAKNIATILSHSGAKVFFVDYQYKELASKALSFL--DGAVPSIIACIDDIDTPTGVQF 154
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +P + + EWDP+ALNYTSGTTS+PKGVV+ HRG ++ ++S ++
Sbjct: 155 GQLEYEQLVQRGNPGYTGELVQDEWDPIALNYTSGTTSAPKGVVYSHRGAYLSSLSLILG 214
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + N PV+LW+LPMFH NGW+++WG+AA GGTN+C+R +Y I H VTH+C A
Sbjct: 215 WEMGNAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCIRNTSAKDMYHNIAEHAVTHMCCA 274
Query: 174 LVVLN-MLSSSP-STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V N +L + P + + PV+ILT GA PPA++L E LGF V+H+YGLTE G +
Sbjct: 275 PIVFNVLLEARPHERREITSPVEILTGGAPPPASLLQDIERLGFHVTHAYGLTEATGPAL 334
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+ +WN L ++A+LKARQG+ + LAD DV +T +SV DG++ GEIV R S
Sbjct: 335 VCEWQKKWNKLPQQDQAKLKARQGISILTLADADVKDLDTMVSVPRDGKTMGEIVLRGSS 394
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
IM GY KD E +S R N WF TGD+GV+H DGYLEIKDRSKDVIISGGENISS E+ES
Sbjct: 395 IMKGYFKDPEATSKAFR-NGWFATGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELES 453
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT---EEAIIEFCRARLPHYMA 408
VLY +P + E A+VA WG+ PCAF+S+K + E II +C+ LPH+
Sbjct: 454 VLYRHPRVLEAAVVAMPHPKWGESPCAFISVKKNSNGDTNDVKESDIIAYCKKNLPHFTV 513
Query: 409 HKSVIIEDELPKTATGKIQKFVLREI 434
K V ELPKT+TGKIQKF LR +
Sbjct: 514 PKRVEFMAELPKTSTGKIQKFQLRAL 539
>gi|302821855|ref|XP_002992588.1| hypothetical protein SELMODRAFT_448826 [Selaginella moellendorffii]
gi|300139552|gb|EFJ06290.1| hypothetical protein SELMODRAFT_448826 [Selaginella moellendorffii]
Length = 547
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/451 (47%), Positives = 301/451 (66%), Gaps = 19/451 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHD-DVSATSSP 62
RLD + +++LL H++S+ +FVD + PL AL L S+ LP+ VL+ D ++ ++
Sbjct: 92 RLDARTIALLLDHAQSRAVFVDSEFFPLVTQALQLLAESSKPLPQLVLVKDKSYTSQAAH 151
Query: 63 TVG------------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ G P+F V P+ E +ALNYTSGTTS PKGV++ HRG ++ +++S
Sbjct: 152 SYGGILEYEELLENSSPDFPLVLPDDEEQSIALNYTSGTTSRPKGVLYTHRGAYLNSIAS 211
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ W + PV+LWTLPMFH NGW ++W +AA GGTNICLR V + I VTH+
Sbjct: 212 ILLWEVGPFPVYLWTLPMFHCNGWCFTWAIAAQGGTNICLRNVTAKATFDAIAESSVTHL 271
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
GA VLNM++SS ++ D P V ++ GA PPAA+L E LGFVV+H+YGLTET G
Sbjct: 272 SGAPTVLNMIASSIPSERRDLPDKVAVIVGGAPPPAAILSSMEELGFVVTHAYGLTETYG 331
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ CAW+ WN+ ERA+LK+RQGV +GL DV P T SV DG++ GE++ R
Sbjct: 332 PALVCAWRPHWNSFPLEERAKLKSRQGVVHLGLHQADVKDPATMESVARDGRTLGEVMVR 391
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M GY +D E + + WF+TGD+GV+H DGY++++DRSKD+IISGGENISS E
Sbjct: 392 GSTVMKGYHRDDEATRAAFQ-GGWFHTGDLGVIHPDGYIQLRDRSKDIIISGGENISSIE 450
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VESVLY +P + E A+VA+ D FWG+ PCAFV+LK ++ + II++CRAR+PH+M
Sbjct: 451 VESVLYGHPEVLEAAVVARPDDFWGETPCAFVTLK-DIGGATSARGIIDYCRARMPHFMV 509
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
+SV+ ELPKT+TGK+QKF+LR+ A+
Sbjct: 510 PRSVVF-GELPKTSTGKVQKFLLRDRARAMG 539
>gi|357517755|ref|XP_003629166.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355523188|gb|AET03642.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 684
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/451 (49%), Positives = 301/451 (66%), Gaps = 23/451 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-PSNTILPKPVLIHDDVSATSSP- 62
RLD VSVLL HS++K+LF D+Q +A AL L T LP VL++D S SSP
Sbjct: 139 RLDAAMVSVLLEHSQAKILFADHQLLEIAQGALDLLRERGTKLPIIVLVND--SDFSSPI 196
Query: 63 -------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
VG F V+P+SEWDP+++NYTSGTTS PKGVV+ HRG ++ +++
Sbjct: 197 RITSTTYEYEKLMEVGDNGFNIVKPQSEWDPISINYTSGTTSRPKGVVYSHRGAYLNSLA 256
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+++ +++ PV+LW +P+FH NGW WG+AA GTNICLRKV I+ I H VTH
Sbjct: 257 TVLLFQMDIFPVYLWNVPLFHCNGWCLPWGVAAQFGTNICLRKVSPRNIFDNIIQHKVTH 316
Query: 170 ICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
+ GA VLNM+ +S ST KPL+ V ++T G+ PP +L + E +GF +SH YGLTET
Sbjct: 317 MGGAPTVLNMILNSASTHRKPLNHKVLVMTGGSPPPPQILSKIEEIGFSISHLYGLTETY 376
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G CAW+ +W+TL ER+++KARQGV + L ++DV T SV DG++ GEI+F
Sbjct: 377 GPGSFCAWRPEWDTLPPEERSKMKARQGVPHVALEEIDVKDSATMESVLADGKTVGEIMF 436
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R ++M GY +D + + +D WF++GD+ V HSDGY+E+KDR KD+I+SGGENISS
Sbjct: 437 RGNTVMSGYFRDLKATEEAFKDG-WFHSGDLAVKHSDGYIEVKDRLKDIIVSGGENISSV 495
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE+VLY +PA+ E A+VA+ D WG+ PCAF+ LK + E II FCR RLPHYM
Sbjct: 496 EVETVLYSHPAVLEAAVVARPDDHWGQTPCAFLKLKEGFDQNAQE--IIAFCRERLPHYM 553
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
A K+VI D +PKT+TGKIQK++LRE A+
Sbjct: 554 APKTVIFLD-MPKTSTGKIQKYILREKAKAL 583
>gi|224139708|ref|XP_002323238.1| predicted protein [Populus trichocarpa]
gi|222867868|gb|EEF04999.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/451 (48%), Positives = 293/451 (64%), Gaps = 23/451 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF------PSNTILPKPVLIHDDVSA 58
RL+ V+ +L HSE+K+ FVDYQ LA AL + S +LP VLI D S
Sbjct: 97 RLNPNHVATILRHSEAKVFFVDYQFVQLARQALQIMMTSESISSKLVLPSVVLIDDIESP 156
Query: 59 TSS----------PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
T + G+P + + + EWDP+ALNYTSGTTS PKGVV+ HRG+F+ ++
Sbjct: 157 TGAIFGEWEYEQLVRKGNPGYIPYEVQDEWDPIALNYTSGTTSEPKGVVYSHRGVFLGSL 216
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
+I W + ++PV+LW+LPMFH NGW+ +WG+AA GGTN+CLR +Y I H VT
Sbjct: 217 GIIIGWEMESEPVYLWSLPMFHCNGWTLAWGIAARGGTNVCLRNTTAKDMYRNIAQHKVT 276
Query: 169 HICGALVVLN-MLSSSPST-KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+C A +V N +L + P + + PV+IL GA PPA++L + + LGF V+HSYGLTE
Sbjct: 277 HMCCAPIVFNIILEAKPDERREISSPVQILVGGAPPPASLLEKMKPLGFHVTHSYGLTEV 336
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G + C W+++WN L +++R+ ARQG+ T+ LA MDV T +SV DG++ GEIV
Sbjct: 337 -GPALVCEWQAKWNNLPSQDQSRIMARQGINTVALAHMDVKDLSTMISVPWDGKTMGEIV 395
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
R ++M GY KD + ++ + N WF TGDIGV+H DGYLEIKDRSKDVIISGGENISS
Sbjct: 396 LRGSTVMKGYFKDPKATAKAFK-NGWFATGDIGVIHPDGYLEIKDRSKDVIISGGENISS 454
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP---TEEAIIEFCRARL 403
E+ESVLY +P + E A+VA WG+ PCAF+++K K E II +CR +L
Sbjct: 455 VELESVLYSHPRVLEAAVVAMPHPVWGESPCAFLAIKKNSEGKSDDVKEADIIAYCRKKL 514
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
PHYM K V ELPKT+TGK+QKF LR++
Sbjct: 515 PHYMVPKKVEFMSELPKTSTGKVQKFQLRDL 545
>gi|224077380|ref|XP_002305237.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|118487892|gb|ABK95768.1| unknown [Populus trichocarpa]
gi|222848201|gb|EEE85748.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 584
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/458 (48%), Positives = 293/458 (63%), Gaps = 31/458 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH--DDVSATSSP 62
RLD K ++ +L HS +K+ FVD Q LA AL P P +I DDV +
Sbjct: 97 RLDAKNIATILIHSGAKVFFVDCQYKELADKALRFLEG----PVPSIIASIDDVDTPTGV 152
Query: 63 TVG-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G +P + + EWDP+ALNYTSGTTS+PKGVV+ HRG ++ T+S +
Sbjct: 153 RFGQFEYEQLVQRGNPGYTGELIQDEWDPIALNYTSGTTSAPKGVVYSHRGAYLSTLSLI 212
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + + PV+LW+LPMFH NGW+++WG+AA GGTN+C+R +Y I H VTH+C
Sbjct: 213 LGWEMGSAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCIRNTSAKDMYQSIADHKVTHMC 272
Query: 172 GALVVLNMLSSSPSTKPLDR-----PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
A +V N+L + KP +R PV+ILT GA PPA++L + ESLGF V+H+YGLTE
Sbjct: 273 CAPIVFNILLEA---KPHERREITSPVEILTGGAPPPASLLEKIESLGFHVTHAYGLTEA 329
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G + C W+++WN L ++++LKARQG+ + LAD D+ +T S+ DG++ GEIV
Sbjct: 330 TGPALVCEWQTKWNKLPQQDQSKLKARQGISILTLADADIKDLDTMASMPRDGKTMGEIV 389
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
R SIM GY KD E +S R N WF TGD+GV+H DGYLEIKDRSKDVIISGGENISS
Sbjct: 390 LRGSSIMKGYFKDPEATSKAFR-NGWFVTGDVGVIHPDGYLEIKDRSKDVIISGGENISS 448
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT---EEAIIEFCRARL 403
E+ESVLY +P + E A+VA WG+ PCAF+S+K + + E II +CR L
Sbjct: 449 VELESVLYRHPRVLEAAVVAMPHPKWGESPCAFISVKKNSNGETNDVKESEIIAYCRKNL 508
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREIVN--AVN 439
P +M K V ELPKT+TGKIQKF LRE+ AVN
Sbjct: 509 PRFMIPKRVEFMPELPKTSTGKIQKFQLREVAKNFAVN 546
>gi|357460691|ref|XP_003600627.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355489675|gb|AES70878.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 582
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/454 (47%), Positives = 293/454 (64%), Gaps = 27/454 (5%)
Query: 4 QRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN-------TILPKPVLIHDDV 56
RL+ ++ +L HSE+K+ FVDY+ A AL L + LP ++I DD+
Sbjct: 96 HRLNAANIATILQHSEAKVFFVDYEFVSKAKDALRLLMEEKDQTEQYSSLPLVIVI-DDI 154
Query: 57 SATSSPTVG-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
+ + +G +PN+ + + EW P+ LNYTSGTTS PKGVV+ HRG ++
Sbjct: 155 NNPTGIRLGELEYEQMVHHGNPNYLPEEIQDEWSPITLNYTSGTTSEPKGVVYSHRGAYL 214
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
T+S ++ W + ++PV+LWTLPMFH NGW+++WG+AA GGTNIC+R IY I +
Sbjct: 215 STLSLILGWEMGSEPVYLWTLPMFHCNGWTFTWGVAARGGTNICIRNTAASDIYRAINLY 274
Query: 166 GVTHICGALVVLN-MLSSSPSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
VTH+C A ++ N +L + PS K + PV ILT GA PPA++L + E LGF V+H+YGL
Sbjct: 275 NVTHMCCAPIIFNIILGAKPSEKRVIKSPVNILTGGAPPPASLLEKIEPLGFHVTHAYGL 334
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TE G + C W+ +WN L E++ LKARQGV + LAD+DV + ET SV DG++ G
Sbjct: 335 TEATGPALVCEWQKKWNVLPKREQSMLKARQGVSVLTLADVDVKNLETMESVVRDGKTMG 394
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EI+ + IM+GY KD+E ++ D WF TGD+GV+H DGYLEIKDRSKDVIISGGEN
Sbjct: 395 EIMLKGSGIMMGYFKDKEATAKAFGDG-WFRTGDVGVIHKDGYLEIKDRSKDVIISGGEN 453
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP-----TEEAIIEF 398
ISS EVE+VLY +P + E A+VA WG+ PCAFV+L K TE+ II +
Sbjct: 454 ISSVEVENVLYSHPKVLEAAVVAMPHPKWGESPCAFVTLNKNEEVKSDFCCVTEDEIITY 513
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
CR LPH+M K V+ ++LPKT TGKIQKF LR
Sbjct: 514 CRKNLPHFMVPKMVVFMEDLPKTLTGKIQKFELR 547
>gi|186473716|ref|YP_001861058.1| AMP-dependent synthetase and ligase [Burkholderia phymatum STM815]
gi|184196048|gb|ACC74012.1| AMP-dependent synthetase and ligase [Burkholderia phymatum STM815]
Length = 550
Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust.
Identities = 205/444 (46%), Positives = 295/444 (66%), Gaps = 18/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + V+ +L HSE KLL VD + + LA AL+ S P V+ +D A S P+V
Sbjct: 103 RLDPEGVAFILRHSECKLLLVDREFASLAAEALTRLDS----PPTVIDIEDYMAPSGPSV 158
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P+++ +P +EW+P+ALNYTSGTT PKGVV HRG +++++ + +
Sbjct: 159 GETDYESLIDQGDPSYEGNKPNNEWEPIALNYTSGTTGDPKGVVASHRGTYLMSLLQMTN 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P +PV+LWTLPMFH NGW ++W + A GT++CLRKV+ +++ I+++ + H+C A
Sbjct: 219 WAMPRKPVYLWTLPMFHANGWCFTWAITAAAGTHVCLRKVNAENVFAEIENYPIDHLCAA 278
Query: 174 LVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
+VL ++S + K L RPV++LT+G+ PP AVL +GF V H +G+TE +G VSC
Sbjct: 279 PIVLAGIASGAAGKKLSRPVRVLTAGSPPPVAVLKSVAEIGFDVDHVFGITEVSGTPVSC 338
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
W+ W+TL E+AR +ARQGVR + D+ V P T + V DG++ GEI+ R ++M
Sbjct: 339 VWQDDWDTLPVPEQARKRARQGVRAVVFEDLIVADPATLLPVPRDGRTAGEIMMRGNTVM 398
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
+GYLK+ + + + WF TGD+ VVH DGY++I DRSKDVIISGGENISS EVE VL
Sbjct: 399 MGYLKNPKATQHAF-EGGWFRTGDVAVVHEDGYVQITDRSKDVIISGGENISSVEVEDVL 457
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
+ +P++ A+VAQ D+ WG+ PCAFV L+ + +++ T E I+ FCR RL HY + V+
Sbjct: 458 HTHPSVFLAAVVAQPDEKWGEVPCAFVELRPD-ARQSTAEEIVAFCRERLAHYKCPRRVV 516
Query: 414 IEDELPKTATGKIQKFVLREIVNA 437
D LPKTATGK+QKF LRE+ +
Sbjct: 517 FSD-LPKTATGKVQKFRLRELARS 539
>gi|302769263|ref|XP_002968051.1| hypothetical protein SELMODRAFT_440236 [Selaginella moellendorffii]
gi|300164789|gb|EFJ31398.1| hypothetical protein SELMODRAFT_440236 [Selaginella moellendorffii]
Length = 552
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/451 (46%), Positives = 301/451 (66%), Gaps = 19/451 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHD-DVSATSSP 62
RLD + +++LL H++S+ +FVD + PL AL L S+ LP+ VL+ D ++ ++
Sbjct: 97 RLDARTIALLLDHAQSRAVFVDSEFFPLVTQALQLLAESSKPLPQLVLVKDKSYTSQAAH 156
Query: 63 TVG------------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ G P+F V P+ E +ALNYTSGTTS PKGV++ HRG ++ +++S
Sbjct: 157 SYGGILEYEELLENSSPDFPLVLPDDEEQSIALNYTSGTTSRPKGVLYTHRGAYLNSIAS 216
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ W + PV+LWTLPMFH NGW ++W +AA GGTNICLR V + I VTH+
Sbjct: 217 ILLWEMGPFPVYLWTLPMFHCNGWCFTWAIAAQGGTNICLRNVTAKATFDAIAESSVTHL 276
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
GA VLNM++SS ++ D P V ++ GA PPAA+L E LGFVV+H+YGLTET G
Sbjct: 277 SGAPTVLNMIASSMPSERRDLPDKVAVIVGGAPPPAAILSSMEELGFVVTHAYGLTETYG 336
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ C+W+ WN+ ERA+LK+RQGV +GL DV P T SV DG++ GE++ R
Sbjct: 337 PALVCSWRPHWNSFPLEERAKLKSRQGVVHLGLHQADVKDPATMESVARDGRTLGEVMVR 396
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M GY +D E + + WF+TGD+GV+H DGY++++DRSKD+IISGGENISS E
Sbjct: 397 GSTVMKGYHRDDEATRAAFQ-GGWFHTGDLGVLHPDGYIQLRDRSKDIIISGGENISSIE 455
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VESVLY +P + E A+VA+ D FWG+ PCAFV+LK ++ + II++CRAR+PH+M
Sbjct: 456 VESVLYGHPEVLEAAVVARPDDFWGETPCAFVTLK-DIGGATSARGIIDYCRARMPHFMV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
+S++ ELPKT+TGK+QKF+LR+ A+
Sbjct: 515 PRSLVF-GELPKTSTGKVQKFLLRDRARAMG 544
>gi|449462377|ref|XP_004148917.1| PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Cucumis
sativus]
gi|449479931|ref|XP_004155749.1| PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Cucumis
sativus]
Length = 574
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 213/443 (48%), Positives = 293/443 (66%), Gaps = 16/443 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++++L HSE+K+ FVDYQ A AL L + + V++ DD+ + +
Sbjct: 97 RLDIKNIALILRHSEAKIFFVDYQYIQEAKDALRLLVAESSPIPLVVVIDDIDTPTGARL 156
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G+ NF V+ + EWD +ALNYTSGTTS+PKGVV+ HRG F+ T+S ++
Sbjct: 157 GNLEYEQLIYDGDANFTPVEVDDEWDSIALNYTSGTTSAPKGVVYSHRGAFLSTLSLVMG 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + N PV+LWTLPMFH NGW+++WG+AA GGTNIC+R I+ I H VTH+C A
Sbjct: 217 WEMGNAPVYLWTLPMFHCNGWTFTWGIAARGGTNICMRNTTASDIFRNINLHRVTHMCCA 276
Query: 174 LVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V ++ + + + + PV +LT GA PPA +L + E+LGF ++H+YGLTE G +
Sbjct: 277 PIVFTIILEADNRDRRRVAWPVNVLTGGAPPPAPLLEKMEALGFHITHAYGLTEATGPAL 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+ +WN L ++A LKARQG+ + LAD+DV + +T SV HDG++ GEIV R S
Sbjct: 337 VCEWQEKWNVLPADQQANLKARQGISILTLADVDVKNLKTMESVPHDGRTTGEIVLRGSS 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GY KD ++ ++ N WF TGDIGV++ DGY+EIKDRSKDVIISGGENISS EVE+
Sbjct: 397 LMKGYFKDPAATAAALK-NGWFLTGDIGVIYPDGYVEIKDRSKDVIISGGENISSVEVET 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLK-WELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P ++E A+VA WG+ PCAFV L+ S + +E ++ FCR L HYM K
Sbjct: 456 VLYRHPQVSEAAVVAMPHPRWGESPCAFVVLQDGGGSGRVSEAEMVAFCRKNLSHYMVPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V+ ELPK A GK+QKF+LRE
Sbjct: 516 KVVFVAELPK-ANGKVQKFMLRE 537
>gi|224086034|ref|XP_002307787.1| predicted protein [Populus trichocarpa]
gi|222857236|gb|EEE94783.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/449 (47%), Positives = 296/449 (65%), Gaps = 18/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS-NTILPKPVLIHD--DVSATSS 61
R D VSVLL HSE+KL+FVDYQ P+A AL + T LP VLI + +A SS
Sbjct: 97 RHDSSMVSVLLKHSEAKLIFVDYQCLPIAQGALEILSERKTKLPLLVLIPECGQPAAISS 156
Query: 62 PTV---------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
P + G +F+ +P EWDP++LNYTSGTTSSPKGV++ HRG ++ ++++ +
Sbjct: 157 PRILEYESLLEKGKLDFEVRRPRDEWDPISLNYTSGTTSSPKGVIYSHRGAYLNSLAAAL 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LW +PMFH NGW +W +AA GGTN+C R V I+ I H VTH+ G
Sbjct: 217 LNDMSAMPVYLWCVPMFHCNGWCLTWAVAAQGGTNVCQRYVTARDIFENIAQHKVTHMSG 276
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VLNM+ +S+ +PL V ++T GA PP+ VL + E LGF V+HSYGLTET G
Sbjct: 277 APTVLNMIINASASEKRPLPGKVAVMTGGAPPPSHVLFKMEELGFHVTHSYGLTETYGPG 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAWK +W +L +A++K+RQGV+ +GL ++D+ P T SV D ++ GE++FR
Sbjct: 337 TVCAWKPEWASLTPEAQAKIKSRQGVQHLGLEELDIKDPVTMKSVPADAKTMGEVMFRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ E + WF +GD+GV H DGY+E+KDRSKD+IISGGENISS EVE
Sbjct: 397 TVMNGYLKNLEATKDAF-SGGWFRSGDLGVKHPDGYIELKDRSKDIIISGGENISSIEVE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
S L+ +PA+ E A+V + D +WG+ PCAFV LK + E +I+FCR LPHYM +
Sbjct: 456 SALFSHPAVLEAAIVGRPDDYWGETPCAFVKLKEGCNA--NAEELIKFCRDHLPHYMTPR 513
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
+V+ + ELPKT+TGK+QK+VL+E A+
Sbjct: 514 TVVFQ-ELPKTSTGKVQKYVLKEKAKAMG 541
>gi|356553223|ref|XP_003544957.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 552
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/451 (49%), Positives = 297/451 (65%), Gaps = 22/451 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF---PSNTILPKPVLIHDDVSATSS 61
RLD ++ +L HSE+K+LFVDY+ P A L L ++ P +LI DD+++ +
Sbjct: 97 RLDANNIATILLHSEAKVLFVDYEYVPKAKETLELLMGKKCHSSTPLLILI-DDINSPTG 155
Query: 62 PTVGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G P F + EW P+ALNYTSGTTS+PKGVV+ HRG ++ T+S
Sbjct: 156 LQFGELEYEQLVYNGDPTFVPEKIHDEWAPIALNYTSGTTSAPKGVVYSHRGAYLSTLSL 215
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ W++ +PV+LWTLPMFH NGW+++WG+AA GGTN+CLR + IY I H VTH+
Sbjct: 216 ILGWKMGTEPVYLWTLPMFHCNGWTFTWGVAARGGTNVCLRNISAYNIYKNISLHHVTHM 275
Query: 171 CGALVVLN-MLSSSPSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
C A +V N +L + PS + + V+ILT GA PP +++ + ESLGF V H+YG TE G
Sbjct: 276 CCAPIVFNIILEAKPSERIEIKSSVEILTGGAPPPPSLIEKIESLGFHVMHAYGSTEATG 335
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ C W+ QWN L E+A+LKARQG+ + L D+DV++ +T SV DG++ GEIV R
Sbjct: 336 PALVCEWQQQWNQLPKVEQAQLKARQGISILTLEDVDVINVDTMESVPRDGKTMGEIVLR 395
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
SIM GYLKD E +S D WF+TGD+GVVH DGYLEIKDRSKDVIISGGENISS E
Sbjct: 396 GSSIMKGYLKDPESTSKAFCDG-WFHTGDVGVVHKDGYLEIKDRSKDVIISGGENISSVE 454
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL-KWELSKKP---TEEAIIEFCRARLP 404
+ESVLY +P + E A+VA WG+ PCAFV L K+E + K TE II +CR +P
Sbjct: 455 LESVLYKHPRVLEAAVVAMPHPRWGESPCAFVVLKKFEGNNKTNDVTEADIIGYCRKNMP 514
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIV 435
+M K V ++LPKT+TGKI+KF LR+ V
Sbjct: 515 PFMVPKLVKFVEDLPKTSTGKIKKFELRDKV 545
>gi|302768757|ref|XP_002967798.1| hypothetical protein SELMODRAFT_409095 [Selaginella moellendorffii]
gi|300164536|gb|EFJ31145.1| hypothetical protein SELMODRAFT_409095 [Selaginella moellendorffii]
Length = 547
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 213/451 (47%), Positives = 296/451 (65%), Gaps = 19/451 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHD-DVSATSSP 62
RLD + +++LL H++S+ +FVD + PL AL L S+ LP+ +LI D ++ ++
Sbjct: 92 RLDARTIALLLDHAQSRAVFVDSEFFPLVTQALQLLAESSKPLPELILIKDKSYTSQAAH 151
Query: 63 TVG------------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ G P+F V P+ E +ALNYTSGTTS PKGV++ HRG ++ +++S
Sbjct: 152 SYGGILEYEELLENSSPDFPLVFPDDEEQSIALNYTSGTTSRPKGVLYTHRGAYLNSIAS 211
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ W + PV+LWTLPMFH NGW ++W +AA GGTNICLR V + I VTH+
Sbjct: 212 ILLWEMGPFPVYLWTLPMFHCNGWCFTWAIAAQGGTNICLRNVTAKATFDAIAESSVTHL 271
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
GA VLNM++SS ++ D P V + GA PP A+L E LGFVV+HSYGLTET G
Sbjct: 272 SGAPTVLNMIASSIPSERRDLPHKVAVRVGGAPPPPAILSSMEELGFVVTHSYGLTETYG 331
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ CAW+ WN+ ERA+LK+RQGV +GL DV P T SV DG++ GE++ R
Sbjct: 332 PALFCAWRPHWNSFPLEERAKLKSRQGVVHLGLHQADVKDPATMESVARDGRTLGEVMVR 391
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M GY +D E + + WF+TGD+GV+H DGY++++DRSKD+IISGGENISS E
Sbjct: 392 GSTVMKGYHRDDEATRAAFQ-GGWFHTGDLGVIHPDGYIQLRDRSKDIIISGGENISSIE 450
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VES+LY +P + E A+VA+ D FWG+ PCAFV+LK E II++CRARLPH+M
Sbjct: 451 VESILYGHPEVLEAAVVARPDDFWGETPCAFVTLKRSGGATSARE-IIDYCRARLPHFMV 509
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
+SV+ LPKT+TGK+QKF+LR+ A+
Sbjct: 510 PRSVVF-GALPKTSTGKVQKFLLRDRARAMG 539
>gi|224135073|ref|XP_002327560.1| predicted protein [Populus trichocarpa]
gi|222836114|gb|EEE74535.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 212/446 (47%), Positives = 285/446 (63%), Gaps = 19/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L HS +K+ FVDYQ LA ALS + +P + DD+ +
Sbjct: 97 RLDARNIATILSHSGAKVFFVDYQYKELASKALSFL--DGAVPSIIACIDDIDTPTGVQF 154
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +P + + EWDP+ALNYTSGTTS+PKGVV+ HRG ++ ++S ++
Sbjct: 155 GQLEYEQLVQRGNPGYTDELVQDEWDPIALNYTSGTTSAPKGVVYSHRGAYLSSLSLILG 214
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + N PV+LW+LPMFH NGW+++WG+AA GGTN+CLR +Y+ I H VTH+C A
Sbjct: 215 WEMGNAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTSAKDMYNNIAEHAVTHMCCA 274
Query: 174 LVVLN-MLSSSP-STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V N +L + P + + PV+ILT GA PPA++L + E LGF V+H+YGLTE G +
Sbjct: 275 PIVFNILLEARPHERREITSPVEILTGGAPPPASLLQKIERLGFHVTHAYGLTEATGPAL 334
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+ +WN L ++A+LKARQG+ + LAD DV +T +SV DG++ GEIV R S
Sbjct: 335 VCEWQKKWNKLPQQDQAKLKARQGISILTLADADVKDLDTMVSVPRDGKTMGEIVLRGSS 394
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
IM GY KD E +S R N W TGD+GV+H DGYLEIKDRSKDVIISGGENISS E+ES
Sbjct: 395 IMKGYFKDPEATSKAFR-NGWLATGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELES 453
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT---EEAIIEFCRARLPHYMA 408
VLY +P + E A+VA WG+ PCAF+S+K S E II +C+ LP +
Sbjct: 454 VLYRHPRVLEAAVVAMPHPRWGESPCAFISVKKNSSGDTNDVKESDIIAYCKKNLPRFTV 513
Query: 409 HKSVIIEDELPKTATGKIQKFVLREI 434
K V ELPKT+TGK+ K LR +
Sbjct: 514 PKRVEFMAELPKTSTGKVLKIQLRAL 539
>gi|224086785|ref|XP_002307962.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
gi|222853938|gb|EEE91485.1| acyl:coa ligase acetate-coa synthetase-like protein [Populus
trichocarpa]
Length = 584
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/454 (47%), Positives = 293/454 (64%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF------PSNTILPKPVLIHDDVSA 58
RL+ V+ +L HSE+K+ FVDYQ LA AL + S +LP VLI D S
Sbjct: 97 RLNPNHVATILRHSEAKVFFVDYQFVQLARQALQILMSSESISSKLVLPSVVLIDDIESP 156
Query: 59 TSS----------PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
T + G+P + + EWDP+ALNYTSGTTS PKGVV+ HRG+F+ ++
Sbjct: 157 TGAIFGEWEYEQLVRKGNPGHIPFEVQDEWDPIALNYTSGTTSEPKGVVYSHRGVFLGSL 216
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
+I W + ++PV++W+LPMFH NGW+++WG+AA GGTN+CLR +Y I H VT
Sbjct: 217 GVIIGWEMASEPVYMWSLPMFHCNGWTFAWGIAARGGTNVCLRNTTAKDMYRNIAQHRVT 276
Query: 169 HICGALVVLNMLSSSPSTKPLDR-----PVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
H+C A +V N+L + KP +R PV+IL GA PPA++L + + LGF V+HSYGL
Sbjct: 277 HMCCAPIVFNILLEA---KPEERREIASPVQILVGGAPPPASLLEKMKPLGFHVTHSYGL 333
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TE G + C W+++WN L +++++ ARQG+ ++ LA MDV T +SV DG++ G
Sbjct: 334 TEV-GPALVCEWQAKWNNLPSQDQSKIMARQGINSVALAHMDVKDLNTMISVPRDGKTMG 392
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV + ++M GY KD + ++ + N WF TGDIGV+H DGYLEIKDRSKDVIISGGEN
Sbjct: 393 EIVLKGSTVMKGYFKDPKATAKAFK-NGWFATGDIGVIHPDGYLEIKDRSKDVIISGGEN 451
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT---EEAIIEFCR 400
ISS E+ESVLY +P + E A+VA WG+ PCAF++++ K E II +CR
Sbjct: 452 ISSVELESVLYSHPRVLEAAVVAMPHPVWGESPCAFLAIRKNSDGKSNDLKEADIIAYCR 511
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
+LP YM K V ELPKT+TGKIQKF LR++
Sbjct: 512 KKLPRYMVPKKVEFIPELPKTSTGKIQKFQLRDL 545
>gi|346990428|gb|AEO52695.1| benzoyl-CoA/cinnamoyl-CoA ligase [Clarkia breweri]
Length = 583
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 222/457 (48%), Positives = 293/457 (64%), Gaps = 31/457 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD VS +L HS +K+LFVD Q LA AL+L L V+I+D+ A S+P
Sbjct: 98 RLDAHTVSTILRHSGTKILFVDCQFVLLARQALALLNHPIRL---VIINDETLALSAPIG 154
Query: 64 VGHPNFKWVQPES--------------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
G ++ + E+ EWDP+ALNYTSGTTS PKGVV+ HRG ++ T+S
Sbjct: 155 AGEVEYEHLISETGFADVDDQIMSVDDEWDPIALNYTSGTTSEPKGVVYSHRGAYLSTLS 214
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
++ W + ++PV+LWTLPMFH NGW+++WG+AA GGTN+C+R IY I H VTH
Sbjct: 215 LILGWEMGSEPVYLWTLPMFHCNGWTFTWGIAARGGTNVCMRNPTAEGIYRNIAVHKVTH 274
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+C A ++ N+L + PL V ILT GA PPAA+L ESLGF V+H+YGLTE G
Sbjct: 275 MCCAPIIFNILLEEENRIPLTSAVNILTGGAPPPAALLQSIESLGFHVTHAYGLTEATGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
+ C W+S+WN L+ +RARLKARQG+ + +AD+DV P SV HDG + GEI+ R
Sbjct: 335 ALLCEWQSKWNGLSSGDRARLKARQGINVLTVADVDVKDPNNMKSVAHDGTTMGEIMLRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
IM GY KD + +S + WF+TGD+GV+H DGY+EIKDRSKDVIISGGENISS E+
Sbjct: 395 SGIMKGYYKDPKATSDAFK-GGWFFTGDVGVIHPDGYVEIKDRSKDVIISGGENISSIEL 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--------TEEAIIEFCRA 401
E VLY +P + E A+VA WG+ PCAF+++K K P TE I+ FC+
Sbjct: 454 EEVLYKHPRVLEAAVVAMPHPRWGESPCAFIAVK----KNPNGFRGDEVTEAEIVSFCKK 509
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+P++M K V D LPKT+TGKIQKF LR + A+
Sbjct: 510 NVPNFMVPKKVEFLDSLPKTSTGKIQKFQLRALAKAL 546
>gi|356538992|ref|XP_003537984.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 553
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/448 (47%), Positives = 295/448 (65%), Gaps = 18/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS-NTILPKPVLI---------HD 54
R D VS+LL HSE+KL+FVDYQ +A AL + T LP VLI H
Sbjct: 99 RHDSAMVSLLLKHSEAKLVFVDYQLLDIAKGALQILSKITTKLPHLVLILESGHPSPPHA 158
Query: 55 DVSATSSPTV--GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ T + G F+ +P+ EWDP++LNYTSGTTS+PKGV++ HRG ++ ++++++
Sbjct: 159 KGTLTYEDLIAKGSLQFEVRRPKDEWDPISLNYTSGTTSNPKGVIYSHRGAYLNSLATVL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ + PV+LW +PMFH NGW W +AA GGTN+C R V I+ I H VTH+ G
Sbjct: 219 LNEMRSMPVYLWCVPMFHCNGWCLPWAIAAQGGTNVCQRSVTAEGIFHNIFRHKVTHMGG 278
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VLNM+ +SP KPL V+++T GA PP V++R E LGF V+HSYGLTET G
Sbjct: 279 APTVLNMIINSPPKVRKPLPGKVEVMTGGAPPPPDVIIRMEELGFNVTHSYGLTETYGPG 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C WK +W+ L+ +A+LKARQGV +G+ D+DV P T SV D ++ GE++FR
Sbjct: 339 SICTWKPEWDNLSRDAQAKLKARQGVAHVGMEDLDVKDPHTMKSVPADAKTMGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLKD + + + WF+TGD+GV H DGY+E+KDRSKD+IISGGENIS+ E+E
Sbjct: 399 TVMNGYLKDLKATQEAFK-GGWFWTGDLGVKHPDGYIELKDRSKDIIISGGENISTIELE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
V++ +PA+ E A+V + D +WG+ PCAFV LK S T + II+FC+ RLP +MA +
Sbjct: 458 GVIFSHPAVFEAAVVGRPDDYWGETPCAFVKLKEGCSA--TSDEIIQFCQNRLPRFMAPR 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
+V+ D LPKT+TGK QKFVLRE A+
Sbjct: 516 TVVFTD-LPKTSTGKTQKFVLREKAKAM 542
>gi|302821919|ref|XP_002992620.1| hypothetical protein SELMODRAFT_236556 [Selaginella moellendorffii]
gi|300139584|gb|EFJ06322.1| hypothetical protein SELMODRAFT_236556 [Selaginella moellendorffii]
Length = 552
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/454 (48%), Positives = 294/454 (64%), Gaps = 25/454 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHDDVSATSSPT 63
RLD + +++LL H++S+ +FVD + PL AL L S+ LP+ VLI D S TS
Sbjct: 97 RLDARTIALLLDHAQSRAVFVDSEFFPLVTQALQLLAESSKPLPQLVLIKDK-SYTSQ-- 153
Query: 64 VGHP----------------NFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
V H +F V P+ E +ALNYTSGTTS PKGV++ HRG ++ +
Sbjct: 154 VAHSYGGILEYEELLENSSQDFPLVFPDDEEQSIALNYTSGTTSRPKGVLYTHRGAYLNS 213
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
++S++ W + PV+LWTLPMFH NGW ++W +AA GGTNICLR V + I V
Sbjct: 214 IASILLWEMGPFPVYLWTLPMFHCNGWCFTWAIAAQGGTNICLRNVTSKATFDAIAESSV 273
Query: 168 THICGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
TH+ GA VLNM++SS ++ D P V + GA PP A+L E LGFVV+HSYGLTE
Sbjct: 274 THLSGAPTVLNMIASSIPSERRDLPDKVAVRVGGAPPPPAILSSMEELGFVVTHSYGLTE 333
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
T G + CAW+ WN+ ERA+LK+RQGV +GL DV P T SV DG++ GE+
Sbjct: 334 TYGPALFCAWRPHWNSFPLEERAKLKSRQGVVHLGLHQADVKDPATMESVARDGRTLGEV 393
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
+ R ++M GY +D E + + WF+TGD+GV+H DGY++++DRSKD+IISGGENIS
Sbjct: 394 MVRGSTVMKGYHRDDEATRAAFQ-GGWFHTGDLGVIHPDGYIQLRDRSKDIIISGGENIS 452
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPH 405
S EVESVLY +P + E A+VA+ D FWG+ PCAFV+LK E II++CRARLPH
Sbjct: 453 SIEVESVLYGHPEVLEAAVVARPDDFWGETPCAFVTLKRSGGATSARE-IIDYCRARLPH 511
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
+M +SV+ LPKT+TGK+QKF+LR+ A+
Sbjct: 512 FMNPRSVVF-GALPKTSTGKVQKFLLRDRARAMG 544
>gi|328542157|ref|YP_004302266.1| AMP-dependent synthetase/ligase [Polymorphum gilvum SL003B-26A1]
gi|326411907|gb|ADZ68970.1| AMP-dependent synthetase and ligase [Polymorphum gilvum
SL003B-26A1]
Length = 549
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 214/443 (48%), Positives = 283/443 (63%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD---VSATSS 61
RLD ++ +L H E+K + VD + + LA AAL L T P +++ + V S
Sbjct: 105 RLDAAAIAFILDHGEAKAVLVDPEFADLARAALEL----TSDPDRLVVDIEDVMVEGGSR 160
Query: 62 PTVG-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
P G P+F W P SEWD + LNYTSGTT +PKGVV+ HRG + +S
Sbjct: 161 PRAGALTYEALLAEGDPDFAWTCPSSEWDAITLNYTSGTTGNPKGVVYHHRGAHLNALSQ 220
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+ W +P V+LWTLPMFH NGW + W +AA GT++CLR V I+ +I VTH
Sbjct: 221 IQTWNMPAHSVYLWTLPMFHCNGWCFPWAIAANAGTSVCLRAVRAEPIFELIAAERVTHF 280
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA +VLNML+ + + K D VK++T+GASPPAAV+ E++G V+H YGLTE G
Sbjct: 281 CGAPIVLNMLAQNAALKTFDHDVKVMTAGASPPAAVIEAMEAMGVEVTHVYGLTEVFGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V CAWKS+W+ L RARLKARQGV+ LA++ V P T V DG++ GEI R
Sbjct: 341 VVCAWKSEWDALPADRRARLKARQGVKNTALAELMVADPGTLKPVPPDGRTIGEIFMRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ ++ R WF +GD+GV+H DGY+E+KDRSKD+IISGGENISS EVE
Sbjct: 401 NVMRGYLKNPAATAEAFR-GGWFASGDLGVMHPDGYVELKDRSKDIIISGGENISSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ E A+VA+ D WG+ PCAFV LK + +E II FCRA + H+ A +
Sbjct: 460 DVLYRHPAVLEAAVVARPDPKWGESPCAFVELK--PGRAASESDIIAFCRAHMAHFKAPR 517
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+V+ LPKT+TGKIQKFVLR+
Sbjct: 518 TVVF-GALPKTSTGKIQKFVLRD 539
>gi|452965784|gb|EME70802.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Magnetospirillum sp. SO-1]
Length = 541
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/449 (46%), Positives = 292/449 (65%), Gaps = 23/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ +L H E+K+L D + +P ALSL + KP++I DD + TS
Sbjct: 101 RLDAEAIAFMLDHGEAKVLLTDREFAPTIRKALSL-----VAKKPIVIDIDDAAVTSGEM 155
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P++ WV P EWD +ALNYTSGTT +PKGVV+ HRG +I + +++
Sbjct: 156 LGEMEYEAFIAGGDPDYAWVWPADEWDAIALNYTSGTTGNPKGVVYHHRGAYINALGNVV 215
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W + PV+LWTLPMFH NGW + W +AA+ GTN+CLR+VD +++ I+ H VTH+CG
Sbjct: 216 NWGMTGHPVYLWTLPMFHCNGWCFPWTLAALAGTNVCLRRVDGGHMFAAIETHKVTHMCG 275
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V+ ML ++P +PL PV+ +T+ A PPAAV+ R ES GF ++H YGLTE G
Sbjct: 276 APIVMGMLINAPEKDRRPLPHPVEFMTAAAPPPAAVIGRLESQGFKITHVYGLTEVYGPA 335
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAW +W+ L ERAR+K+RQGVR + M V P T + V DG + GE+ +R
Sbjct: 336 TVCAWHEEWDELPLDERARMKSRQGVRYVNEEAMMVADPVTLVPVPQDGVTMGEVFYRGN 395
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + WF+TGD+GV H+DGY+E+KDRSKD+IISGGENIS+ EVE
Sbjct: 396 VVMKGYLKNPAATQEAF-SGGWFHTGDLGVWHADGYIELKDRSKDIIISGGENISTIEVE 454
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ E A+VA+ D+ WG+ PCAF+ LK T + II FCR RL HY +
Sbjct: 455 GVLYQHPAVGEAAVVARPDEKWGETPCAFIGLK--EGATATADEIIAFCRQRLAHYKCPR 512
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
+V+ LPKT+TGK+QKFVLRE+ +N
Sbjct: 513 TVVFTS-LPKTSTGKVQKFVLREMAKKIN 540
>gi|414864658|tpg|DAA43215.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 644
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/445 (48%), Positives = 284/445 (63%), Gaps = 14/445 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALS-LFPSNTILPKPVLIHDDVSATSSPT 63
R D VSVLL HS +K+ V+ + AA+ L SN+ PVL+ S
Sbjct: 193 RHDAAMVSVLLKHSGAKVFLVESNLLDVGRAAMKRLAESNSAAALPVLLTISDDTDSDDY 252
Query: 64 V-----GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
G F P E DP+ALNYTSGTTS PKGVV+ HRG ++ T+++++ + I
Sbjct: 253 EDLVRNGPARFDIRWPADELDPIALNYTSGTTSRPKGVVYSHRGAYLNTIATVLAYDITA 312
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
P +LWT+PMFH NGW+ WG+A GGTN+CLR +I+ I HGVTH+ GA VLN
Sbjct: 313 MPTYLWTVPMFHCNGWNLPWGVAMQGGTNVCLRHFTGEVIFDSITRHGVTHMGGAPTVLN 372
Query: 179 MLSSSPST----KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
M++++ + KPL PV+++T GA PP VL E LGFVV YGLTET G C
Sbjct: 373 MMANARTATAERKPLPWPVRVMTGGAPPPPRVLFAVEELGFVVYQIYGLTETYGPATVCT 432
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W +W+ L ERARLKARQG + + D+DV++P T SV HDGQ+ GE++FR ++M
Sbjct: 433 WMPEWDALPAEERARLKARQGFHHVAMQDVDVMNPSTMESVPHDGQTVGEVMFRGNTVMS 492
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GY KD + + M W +TGD+ V H DGY++IKDR+KD+IISGGENISS EVESV++
Sbjct: 493 GYYKDLKATKESM-AGGWLHTGDLAVRHPDGYIQIKDRAKDIIISGGENISSIEVESVIF 551
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ E A+VA+ D WG+ PCAFV LK S TE II FCR +LPHYMA K+V+
Sbjct: 552 SHPAVLEAAVVARPDHHWGETPCAFVKLKDGASA--TEAEIINFCREKLPHYMAPKTVVF 609
Query: 415 EDELPKTATGKIQKFVLREIVNAVN 439
ED LPKT+TGK QKFVLR+ A+
Sbjct: 610 ED-LPKTSTGKTQKFVLRDKARAMG 633
>gi|356497397|ref|XP_003517547.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 553
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/448 (47%), Positives = 293/448 (65%), Gaps = 18/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI-LPKPVLI---------HD 54
R D VS+LL HSE+KLLFVDYQ +A AL + T +P VLI H
Sbjct: 99 RHDSTMVSLLLKHSEAKLLFVDYQFLHIAQGALQILSKTTTKIPHLVLISECGHPLPPHA 158
Query: 55 DVSATSSPTVGHPNFKWV--QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ V N ++V +P+ EWDP++LNYTSGTTS+PKGV++ HRG ++ ++++++
Sbjct: 159 KGTLIYEDLVAKGNLQFVVRRPKDEWDPISLNYTSGTTSNPKGVIYSHRGAYLNSLATVL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ + P++LW +PMFH NGW W +AA GGTN+C R V I+ I H VTH+ G
Sbjct: 219 LNEMRSMPLYLWCVPMFHCNGWCLPWAIAAQGGTNVCQRSVTAEGIFDNIFKHKVTHMGG 278
Query: 173 ALVVLNM-LSSSPST-KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VLNM ++SSP KPL V+++T GA PP V+ R E LGF V+HSYGLTET G
Sbjct: 279 APTVLNMIINSSPKVQKPLPGKVQVMTGGAPPPPDVIFRMEELGFNVTHSYGLTETFGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C WK +W+ L +A+LKARQGV +G+ +DV P T SV D ++ GE++FR
Sbjct: 339 SICTWKPEWDNLPQDAQAKLKARQGVAHVGMEGLDVKDPHTMKSVPADAKTMGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLKD + + + WF+TGD+GV H DGY+E+KDRSKD+IISGGENIS+ E+E
Sbjct: 399 TVMNGYLKDLKATQEAFK-GGWFWTGDLGVKHPDGYIELKDRSKDIIISGGENISTIELE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
V++ +PA+ E A+V + D +WG+ PCAFV LK S T E II+FC+ RLP +MA +
Sbjct: 458 GVIFSHPAVFEAAVVGRPDDYWGETPCAFVKLKEGCSA--TSEEIIQFCQNRLPRFMAPR 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
+V+ D LPKT+TGK QKFVLRE A+
Sbjct: 516 TVVFTD-LPKTSTGKTQKFVLREKAKAM 542
>gi|357481321|ref|XP_003610946.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355512281|gb|AES93904.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 551
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 215/447 (48%), Positives = 295/447 (65%), Gaps = 17/447 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI-LPKPVLI-HDDVSATSSP 62
R D VS+LL HS++K+LFVD++ +A AL + +T LP VLI D + SP
Sbjct: 97 RHDSSMVSLLLKHSDAKILFVDHELLDIAKGALEILSKSTAKLPLLVLILEGDAHPSVSP 156
Query: 63 ---------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
+ G +F+ +P+ EWDP++LNYTSGTTSSPKGVV+ HRG ++ ++++++
Sbjct: 157 GTLIYENLISEGKLDFEVKRPKDEWDPISLNYTSGTTSSPKGVVYSHRGAYLNSLATILL 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + PV+LW +PMFH NGW WG+AA GG N+C R V I+ I H VTH GA
Sbjct: 217 NEMKSMPVYLWCVPMFHCNGWCLPWGIAAQGGANVCQRNVTAKGIFDNIFKHKVTHTGGA 276
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VLN L ++P KPL R V ++T GA PP V R E LGF + HSYGLTET G
Sbjct: 277 PTVLNSLINAPPDIRKPLPRKVVVMTGGAPPPPDVFFRMEELGFDLVHSYGLTETYGPGS 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C WK +W++L+ E+A+ K+RQGV+ IGL +D+ P T SV D ++ GE++FR +
Sbjct: 337 ICTWKPEWSSLSREEQAKKKSRQGVQHIGLEGLDIKDPVTMKSVPADAKTMGEVMFRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLKD + + + WF TGD+GV HSDGY+E+KDRSKD+IISGGENIS+ E+E
Sbjct: 397 VMNGYLKDLKATQESFK-GGWFRTGDLGVKHSDGYIELKDRSKDIIISGGENISTIELEG 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
V+Y +PA+ E A+V + D++WG+ PCAFV LK TEE II+FC+ RLP +MA K+
Sbjct: 456 VIYSHPAVVEAAVVGRPDEYWGETPCAFVKLKE--GHNATEEEIIQFCQKRLPRFMAPKT 513
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
V+ D LPKT+TGK QK+VL+E A+
Sbjct: 514 VVFAD-LPKTSTGKTQKYVLKEKAKAM 539
>gi|357120861|ref|XP_003562143.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 613
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 212/455 (46%), Positives = 292/455 (64%), Gaps = 23/455 (5%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKP-VLIHDDVSAT 59
V RLD K V+ +L HSE+KL FVDY+ LA AL L S+ P V + DD+
Sbjct: 125 TVNTRLDAKAVAAILRHSEAKLFFVDYEYVRLASDALQLLVSDGASQVPLVAVIDDLDRP 184
Query: 60 SSPTVGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
+ +G P + EWD + LNYTSGTTS+PKGVV+ HRG ++ T
Sbjct: 185 TGVRLGELEYEGLVSRGDPTVQLPMLADEWDAVTLNYTSGTTSAPKGVVYSHRGAYLSTT 244
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
S L+ W + +PV+LWTLPMFH NGW+++WG+AA GG N+C+R +Y I HGVT
Sbjct: 245 SLLMSWEMGAEPVYLWTLPMFHCNGWTFTWGVAARGGVNVCIRDARAADVYGAIARHGVT 304
Query: 169 HICGALVVLNML------SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
H+C A VV N+L +S+P+ + L PV +LT GA PPAA+L R E +GF V+H+YG
Sbjct: 305 HMCCAPVVFNILLEGAAATSAPNQRQLAAPVHVLTGGAPPPAALLERVERIGFHVTHAYG 364
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTE G ++C W++QW+ L ++RARLKARQGV + LAD DV++ +T SV+ DG++
Sbjct: 365 LTEATGPALACEWRAQWDHLPVSDRARLKARQGVSVLSLADADVINEDTMSSVQRDGKAL 424
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R S+M GYLK+ E + + WF TGD+GVVH DGY+EIKDRSKDVIISGGE
Sbjct: 425 GEIVLRGSSVMKGYLKNPEANEAAFK-GGWFMTGDVGVVHPDGYIEIKDRSKDVIISGGE 483
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK----WELSKKPTEEAIIEF 398
NI S EVE L+ +PA+ + A+VA WG+ PCAFV + + + + EE +++F
Sbjct: 484 NICSKEVEEALFAHPAVADAAVVAMPHPHWGETPCAFVVPRKKEDGDQNVQVCEEEVVDF 543
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
CR R+ +M + V++ + LP+ A GK++K LR+
Sbjct: 544 CRKRMARFMVPRKVVLCEALPRNALGKVEKVKLRD 578
>gi|168049860|ref|XP_001777379.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671228|gb|EDQ57783.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 561
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 217/461 (47%), Positives = 292/461 (63%), Gaps = 31/461 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT-ILPKPVLI----------- 52
RLD + + L HS++K L VD + PL AL + S + P+L+
Sbjct: 96 RLDARMTAFFLEHSKTKALIVDEEFFPLIDEALGILSSKLGSIEMPLLVVAEEGQGGIDR 155
Query: 53 --HDDVSAT---------SSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHR 101
H +A S + G P F W P EWD +AL YTSGTTSSPKGV+ HR
Sbjct: 156 QKHGGFAAALARGAIEYESFLSEGDPAFVWAPPADEWDSIALGYTSGTTSSPKGVLLSHR 215
Query: 102 GLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSV 161
G ++ +S+L+ W +P V+LWTLP+FH NGW YSWG+AA GTN+CLR V IY+
Sbjct: 216 GAYVAALSNLLVWEVPIGAVYLWTLPLFHCNGWCYSWGIAAHAGTNVCLRHVTATGIYNA 275
Query: 162 IKHHGVTHICGALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSH 219
I+ +GVTH CGA VVLNML +SP ++ P+ + ++T+GA+PPA VL + E GF V+H
Sbjct: 276 IRKYGVTHFCGAPVVLNMLINSPVSERAPMSHTIHVMTAGAAPPAIVLSKMEEQGFRVTH 335
Query: 220 SYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDG 279
+YGLTET G CAWK +W++L +RARL +RQGVR +GL +DVV ++ + V DG
Sbjct: 336 TYGLTETFGPSTICAWKPEWDSLPVADRARLNSRQGVRYVGLEGLDVVDLKSMVPVPADG 395
Query: 280 QSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIIS 339
+ GE+V R +M GYL + + + + W+++GDI V H DGY+EIKDR+KD+IIS
Sbjct: 396 ATLGEVVMRGNMVMKGYLNNPKATEESFQ-GGWYHSGDIAVKHPDGYIEIKDRAKDIIIS 454
Query: 340 GGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEF 398
GGENISS EVES+LY +P I E ++VA+ D+ WG+ PCAF++ K P EA +I+F
Sbjct: 455 GGENISSLEVESILYRHPGILEASVVARPDEQWGETPCAFITPN---GKVPITEADVIQF 511
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
CR LPHYM +SV+ LPKTATGKIQK VLR A+
Sbjct: 512 CRKELPHYMVPRSVVF-GPLPKTATGKIQKHVLRTKAKALG 551
>gi|414864659|tpg|DAA43216.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 762
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 218/445 (48%), Positives = 284/445 (63%), Gaps = 14/445 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALS-LFPSNTILPKPVLIHDDVSATSSPT 63
R D VSVLL HS +K+ V+ + AA+ L SN+ PVL+ S
Sbjct: 311 RHDAAMVSVLLKHSGAKVFLVESNLLDVGRAAMKRLAESNSAAALPVLLTISDDTDSDDY 370
Query: 64 V-----GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
G F P E DP+ALNYTSGTTS PKGVV+ HRG ++ T+++++ + I
Sbjct: 371 EDLVRNGPARFDIRWPADELDPIALNYTSGTTSRPKGVVYSHRGAYLNTIATVLAYDITA 430
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
P +LWT+PMFH NGW+ WG+A GGTN+CLR +I+ I HGVTH+ GA VLN
Sbjct: 431 MPTYLWTVPMFHCNGWNLPWGVAMQGGTNVCLRHFTGEVIFDSITRHGVTHMGGAPTVLN 490
Query: 179 MLSSSPST----KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
M++++ + KPL PV+++T GA PP VL E LGFVV YGLTET G C
Sbjct: 491 MMANARTATAERKPLPWPVRVMTGGAPPPPRVLFAVEELGFVVYQIYGLTETYGPATVCT 550
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W +W+ L ERARLKARQG + + D+DV++P T SV HDGQ+ GE++FR ++M
Sbjct: 551 WMPEWDALPAEERARLKARQGFHHVAMQDVDVMNPSTMESVPHDGQTVGEVMFRGNTVMS 610
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GY KD + + M W +TGD+ V H DGY++IKDR+KD+IISGGENISS EVESV++
Sbjct: 611 GYYKDLKATKESM-AGGWLHTGDLAVRHPDGYIQIKDRAKDIIISGGENISSIEVESVIF 669
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ E A+VA+ D WG+ PCAFV LK S TE II FCR +LPHYMA K+V+
Sbjct: 670 SHPAVLEAAVVARPDHHWGETPCAFVKLKDGASA--TEAEIINFCREKLPHYMAPKTVVF 727
Query: 415 EDELPKTATGKIQKFVLREIVNAVN 439
ED LPKT+TGK QKFVLR+ A+
Sbjct: 728 ED-LPKTSTGKTQKFVLRDKARAMG 751
>gi|83311600|ref|YP_421864.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Magnetospirillum magneticum AMB-1]
gi|82946441|dbj|BAE51305.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Magnetospirillum magneticum AMB-1]
Length = 734
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/449 (46%), Positives = 294/449 (65%), Gaps = 23/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ +L H E+K+L D + +P ALSL + KP++I DD + T+
Sbjct: 294 RLDAEAIAFMLQHGEAKVLLTDREFAPTIKKALSLLEA-----KPIVIDIDDAAVTTGEM 348
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P + WV P EWD +ALNYTSGTT +PKGVV+ HRG +I + +++
Sbjct: 349 LGEMEYEAFIAGGDPEYAWVWPSDEWDAIALNYTSGTTGNPKGVVYHHRGAYINALGNVV 408
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W + PV+LWTLPMFH NGW + W +AA+ GTN+CLR+VD +++ I+ H VTH+CG
Sbjct: 409 NWGMTGHPVYLWTLPMFHCNGWCFPWTLAALAGTNVCLRRVDGGHMFAAIEKHKVTHMCG 468
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V+ ML ++P +PL PV+ +T+ A PPAAV+ R ES GF ++H YGLTE G
Sbjct: 469 APIVMGMLINAPEKDRRPLPHPVEFMTAAAPPPAAVIGRLESQGFKITHVYGLTEVYGPA 528
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAWK +W+ L ERA++K+RQGVR + M V P + + V DG + GE+ +R
Sbjct: 529 TVCAWKEEWDELPLDERAKMKSRQGVRYVNEEAMMVADPVSLVPVPKDGATMGEVFYRGN 588
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ ++ WF+TGD+GV H+DGY+E+KDRSKD+IISGGENIS+ EVE
Sbjct: 589 VVMKGYLKNPSATNEAF-SGGWFHTGDLGVWHADGYIELKDRSKDIIISGGENISTIEVE 647
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P++ E A+VA+ D+ WG+ PCAF+ LK T E I+ FCR RL HY +
Sbjct: 648 GVLYQHPSVGEAAVVARPDEKWGETPCAFIGLK--DGATATAEEIMAFCRERLAHYKCPR 705
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
+V+ + LPKT+TGK+QK+VLRE+ +N
Sbjct: 706 TVVFTN-LPKTSTGKVQKYVLREMAKKLN 733
>gi|449508747|ref|XP_004163400.1| PREDICTED: LOW QUALITY PROTEIN: probable acyl-activating enzyme
2-like [Cucumis sativus]
Length = 547
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/450 (45%), Positives = 296/450 (65%), Gaps = 19/450 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS-NTILPKPVLIHDDVSATSSPT 63
R D VSVLL HSE+K+ FVD+Q +A A+ L ++ PK +LI D +S +
Sbjct: 97 RHDSSMVSVLLRHSEAKIXFVDHQLFEVACEAIRLLEQGDSEPPKLILILDSEHGSSPAS 156
Query: 64 V-------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ G F+ +P+SEWDP+++NYTSGTTS PKGVV+ HRG ++ ++++
Sbjct: 157 ISSNVYEYESLIASGSCEFEVRRPKSEWDPISINYTSGTTSMPKGVVYSHRGAYLNSLAT 216
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ + + PV+LWT PMFH NGW +WG+AA GGTN+CLRKV I+ I H TH+
Sbjct: 217 VLLGGMGSMPVYLWTCPMFHCNGWCLTWGVAAQGGTNLCLRKVSPKAIFEKIALHNATHM 276
Query: 171 CGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
A VLNM+++SP + + L V +LT G+ PP VL + E +GF + H YGLTET G
Sbjct: 277 AAAPTVLNMIANSPVSDRRLLPNKVDVLTGGSPPPPQVLAKMEEMGFRICHLYGLTETYG 336
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C WK W+ L E++R++ARQG+ +GL ++DV P+T SV DG++ GEI+FR
Sbjct: 337 PGTCCTWKPMWDDLPSDEKSRIRARQGIHHVGLQEVDVRDPKTMASVPTDGKTMGEIMFR 396
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M GY K+Q+ + + WF++GD V H D Y+E+KDR KDVIISGGENIS+ E
Sbjct: 397 GNTVMSGYFKNQKATEEAFK-GGWFHSGDAAVKHPDHYIEVKDRLKDVIISGGENISTVE 455
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE++L+ +P++ E A+VA+ D WG+ PCAFV LK E T + +I++CR RLPHYMA
Sbjct: 456 VETILFSHPSVLEAAVVARPDDHWGETPCAFVVLK-EGCNTVTAQQLIDYCRDRLPHYMA 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAV 438
++++ +D LPKT+TGK+QKF+LRE A+
Sbjct: 515 PRTIVFQD-LPKTSTGKVQKFILRERAKAM 543
>gi|449455718|ref|XP_004145598.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
gi|449512688|ref|XP_004164116.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
Length = 559
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/456 (45%), Positives = 301/456 (66%), Gaps = 26/456 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI----LPKPVLIH------- 53
R D VS LL HSE+K++ D+Q + AA+ + S T+ LP+ V++
Sbjct: 96 RHDAAMVSTLLGHSEAKIIVADHQYLHIVKAAIEIM-SKTMAAEELPRIVIVQEFDHPSS 154
Query: 54 ---------DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
DD+ S G +F+ +P E DP++LNYTSGTTS PKGV++ HRG +
Sbjct: 155 NINGFDSASDDLEYESLLNTGTLDFEIRRPIDERDPISLNYTSGTTSRPKGVIYSHRGTY 214
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ T+S+++ + + V+LWT+PMFH NGWS +WG+AA GGTNIC R V+ I++ I
Sbjct: 215 LNTLSTVLLNDMSSMAVYLWTVPMFHCNGWSMTWGVAAQGGTNICQRNVNAKEIFANISL 274
Query: 165 HGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
H VTH+ GA VLNM+ ++P T KPL V ++T GA PP+ +L + LGF++ H YG
Sbjct: 275 HNVTHMGGAPTVLNMIVNAPITEQKPLLGKVTVMTGGAPPPSNILYKMRELGFLIVHCYG 334
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G C WK +W++L D ++A+LK+RQG++ IG+ +D+ +P T SV DG++
Sbjct: 335 LTETYGVATFCHWKPEWDSLPDEKQAKLKSRQGMQHIGVEGVDIKNPITMESVPADGKTM 394
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE++ R ++M+GYLKD + + + WF +GD+GV H DGY+E+KDRSKD+IISGGE
Sbjct: 395 GEVMIRGNTVMIGYLKDVKATEEAF-NGGWFRSGDLGVRHPDGYIELKDRSKDIIISGGE 453
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NIS+ EVESVL+ +P++ E A+V + D WG+ PCAFV+LK TEE II+FCR
Sbjct: 454 NISTIEVESVLFNHPSVLEAAIVGRPDDHWGETPCAFVNLKH--GSNATEEEIIKFCRDN 511
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
LPHYMA K+V+ + +LPK++TGKIQK +L+E A+
Sbjct: 512 LPHYMAPKTVVFKSDLPKSSTGKIQKLILKEEAKAM 547
>gi|357517773|ref|XP_003629175.1| Acyl coa ligase acetate-coa synthetase-like protein [Medicago
truncatula]
gi|355523197|gb|AET03651.1| Acyl coa ligase acetate-coa synthetase-like protein [Medicago
truncatula]
Length = 732
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/450 (47%), Positives = 299/450 (66%), Gaps = 21/450 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI---------HDD 55
RLD VSVLL HS++K+LFVDYQ +A AL L + KP+L+ + D
Sbjct: 266 RLDANMVSVLLEHSQAKILFVDYQLLEVARGALDLL-AKRAKRKPILVMIIDSDCTSNID 324
Query: 56 VSATSSP-----TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+++ S +GH +F V+P SE DP+++NYTSGTTS PKGVV HRG ++ ++++
Sbjct: 325 ITSISYDYEKLIAIGHNDFDIVRPHSELDPISINYTSGTTSRPKGVVFSHRGAYLNSLAT 384
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ ++ PV+LW +P+FH NGW +WG+AA GTNICLRKV I+ I H VT++
Sbjct: 385 VLLLQMTLFPVYLWNVPLFHANGWCLAWGVAAQFGTNICLRKVSPKNIFDNIIKHKVTYM 444
Query: 171 CGALVVLNMLSSS--PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
GA VLNM+++S K L+ V ++T+G+ PP +L E GF ++H YGLTET G
Sbjct: 445 GGAPTVLNMIANSTLADRKLLNHKVAVITAGSPPPPQILSMMEENGFNITHMYGLTETCG 504
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CAW+ +W+ L E++++KARQGV +GL ++DV P T SV DG++ GE++FR
Sbjct: 505 AGTFCAWRPEWDMLPPKEKSKIKARQGVPHVGLEELDVKDPSTMDSVPADGKTVGEVMFR 564
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M GY +D + + +D WF++GD+ V HSDGY+EIKDR KD+I+SGGENISS E
Sbjct: 565 GNTMMSGYFQDFKATEEAFKDG-WFHSGDLAVKHSDGYIEIKDRLKDIIVSGGENISSIE 623
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE+VLY +PA+ E A+VA+ D WG+ PCA++ LK E II FCR RLPH+MA
Sbjct: 624 VETVLYSHPAVLEAAVVARPDDLWGQTPCAYLKLKDGFDADVQE--IINFCRDRLPHFMA 681
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAV 438
K+VI +D +PKT+TGKIQKFVLRE A+
Sbjct: 682 PKTVIFQD-MPKTSTGKIQKFVLREKAKAL 710
>gi|242037043|ref|XP_002465916.1| hypothetical protein SORBIDRAFT_01g048050 [Sorghum bicolor]
gi|241919770|gb|EER92914.1| hypothetical protein SORBIDRAFT_01g048050 [Sorghum bicolor]
Length = 546
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 213/442 (48%), Positives = 276/442 (62%), Gaps = 11/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
R D VSVLL HS +K+ V+ + AAL + PVL+ S
Sbjct: 99 RHDAAMVSVLLKHSGAKVFLVESNLLDVGRAALKRLGESNSAALPVLLTISDDTDSDDYE 158
Query: 65 -----GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQ 119
F P E DP++LNYTSGTTS PKGVV+ HRG ++ T+++++ + I
Sbjct: 159 DLVRNAPDRFDIRWPADELDPISLNYTSGTTSRPKGVVYSHRGAYLNTIATVLAYDITAM 218
Query: 120 PVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNM 179
P +LWT+PMFH NGW+ WG+A GGTN+CLR +I+ I HGVTH+ GA VLNM
Sbjct: 219 PTYLWTVPMFHCNGWNLPWGVAMQGGTNVCLRHFTAGVIFDSIARHGVTHMGGAPTVLNM 278
Query: 180 LSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKS 237
++++P PL PV+++T GA PP VL E LGFVV H YGLTET G C W
Sbjct: 279 IANAPPADRMPLPGPVRVMTGGAPPPPRVLFAVEELGFVVYHIYGLTETYGPATVCTWMP 338
Query: 238 QWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYL 297
+W+ L RARLKARQG I + D DV +P T V HDG++ GE++FR ++M GY
Sbjct: 339 EWDALPAEHRARLKARQGFHHIAMQDADVKNPTTMECVPHDGETVGEVMFRGNTVMSGYY 398
Query: 298 KDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
KD + + M W +TGD+ V H DGY+E+KDR+KD+IISGGENISS EVESV++ +P
Sbjct: 399 KDLKATKESMA-GGWLHTGDLAVRHPDGYIELKDRAKDIIISGGENISSIEVESVIFSHP 457
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDE 417
A+ E A+VA+ D WG+ PCAFV LK S TE II FCR RLPHYMA K+V+ ED
Sbjct: 458 AVLEAAVVARPDDHWGETPCAFVKLKDGASA--TEAEIISFCRERLPHYMAPKTVVFED- 514
Query: 418 LPKTATGKIQKFVLREIVNAVN 439
+PKT+TGK QKFVLR+ A+
Sbjct: 515 MPKTSTGKTQKFVLRDKARAMG 536
>gi|449434092|ref|XP_004134830.1| PREDICTED: probable acyl-activating enzyme 2-like [Cucumis sativus]
Length = 547
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 207/450 (46%), Positives = 295/450 (65%), Gaps = 19/450 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS-NTILPKPVLIHDDVSATSSPT 63
R D VSVLL HSE+K++FVD+Q +A A+ L ++ PK VLI D +S +
Sbjct: 97 RHDSSMVSVLLRHSEAKIIFVDHQLFEVACEAIRLLEQGDSEPPKLVLILDSEHGSSPAS 156
Query: 64 V-------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ G F+ +P+SEWDP+++NYTSGTTS PKGVV+ HRG ++ ++++
Sbjct: 157 ISSNVYEYESLIASGSCEFEVRRPKSEWDPISINYTSGTTSMPKGVVYSHRGAYLNSLAT 216
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ + + PV+LWT PMFH NGW +WG+AA GGTN+CLRKV I+ I H TH+
Sbjct: 217 VLLGGMGSMPVYLWTCPMFHCNGWCLTWGVAAQGGTNLCLRKVSPKAIFEKIALHNATHM 276
Query: 171 CGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
A VLNM+++SP + + L V +LT G+ PP VL E +GF + H YGLTET G
Sbjct: 277 AAAPTVLNMIANSPVSDRRLLPNKVDVLTGGSPPPPQVLAEMEEMGFRICHLYGLTETYG 336
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C WK W+ L E++R++ARQG+ +GL ++DV P+T SV DG++ GEI+FR
Sbjct: 337 PGTYCTWKPMWDDLPSDEKSRIRARQGIHHVGLQEVDVRDPKTMASVPTDGKTMGEIMFR 396
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M GY K+Q+ + WF++GD V H D Y+E+KDR KDVIISGGENIS+ E
Sbjct: 397 GNTVMSGYFKNQKATEEAFM-GGWFHSGDAAVKHPDHYIEVKDRLKDVIISGGENISTVE 455
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE++L+ +P++ E A+VA+ D WG+ PCAFV LK E T + +I++CR RLPHYMA
Sbjct: 456 VETILFSHPSVLEAAVVARPDDHWGETPCAFVVLK-EGCNTVTAQQLIDYCRDRLPHYMA 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAV 438
++++ +D LPKT+TGK+QKF+LRE A+
Sbjct: 515 PRTIVFQD-LPKTSTGKVQKFILRERAKAM 543
>gi|46202504|ref|ZP_00053109.2| COG0318: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Magnetospirillum magnetotacticum MS-1]
Length = 486
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/449 (46%), Positives = 289/449 (64%), Gaps = 23/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ +L H E+K+L D + +P ALSL KP++I DD + T+
Sbjct: 46 RLDAEAIAFMLSHGEAKVLLTDREFAPTIKKALSLLDK-----KPLVIDIDDAAVTTGEM 100
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P++ WV P EWD +ALNYTSGTT +PKGVV+ HRG +I + +++
Sbjct: 101 LGEMEYEAFIAGGDPDYAWVWPADEWDAIALNYTSGTTGNPKGVVYHHRGAYINALGNVV 160
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W + PV+LWTLPMFH NGW + W +AA+ GTN+CLR+VD +++ I+ H VTH+CG
Sbjct: 161 NWGMTGHPVYLWTLPMFHCNGWCFPWTLAALAGTNVCLRRVDGGHMFAAIEKHKVTHMCG 220
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V+ ML ++P +PL PV+ +T+ A PPAAV+ R ES GF ++H YGLTE G
Sbjct: 221 APIVMGMLINAPEKDRRPLPHPVEFMTAAAPPPAAVIERLESQGFKITHVYGLTEVYGPA 280
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAW +W+ L ERARLK+RQGVR + M V P T + V DG + GE+ +R
Sbjct: 281 TVCAWHEEWDALPTEERARLKSRQGVRYVNEEAMMVADPLTLVPVPKDGVTMGEVFYRGN 340
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + WF+TGD+GV H D Y+E+KDRSKD+IISGGENIS+ EVE
Sbjct: 341 VVMKGYLKNPAATDEAF-SGGWFHTGDLGVWHGDDYIELKDRSKDIIISGGENISTIEVE 399
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ E A+VA+ D+ WG+ PCAF+ LK T E I+ FCR RL HY +
Sbjct: 400 GVLYQHPAVGEAAVVARPDEKWGETPCAFIGLK--EGGAATAEEIMAFCRQRLAHYKCPR 457
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
+V+ LPKT+TGK+QK+VLRE+ +N
Sbjct: 458 TVVFTS-LPKTSTGKVQKYVLREMAKKLN 485
>gi|168000891|ref|XP_001753149.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695848|gb|EDQ82190.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 557
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/458 (46%), Positives = 296/458 (64%), Gaps = 27/458 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP--KP--VLIHDDVSATS 60
RLD + +SVLL HSE+K+LF D Q + AL ++ S++ P KP ++I D + A S
Sbjct: 95 RLDARMISVLLSHSETKVLFADSQHLQVVQEALRMWLSSSDAPAEKPQIIVIEDRLDAGS 154
Query: 61 SP------------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRG 102
G P+F P +W+ + LNYTSGTTS PKGV++ HRG
Sbjct: 155 YNFQTFLPGWGELVEYEEFLASGDPSFPIQWPLDDWETIVLNYTSGTTSRPKGVLYHHRG 214
Query: 103 LFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
++ + ++ W + ++ V+LWTLPMFH NGW++ WGMAA+ GTN+ +R V+ IY I
Sbjct: 215 AYLAPLITVQFWGMQDESVYLWTLPMFHCNGWTFIWGMAAIAGTNVIIRNVEAKAIYDSI 274
Query: 163 KHHGVTHICGALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHS 220
H VTH+CGA VV N ++++P K L V +T GA PP +VL ES+GF V HS
Sbjct: 275 VKHKVTHLCGAPVVFNTIANAPPQDKKKLPGRVFTITGGAPPPPSVLSNMESMGFTVLHS 334
Query: 221 YGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQ 280
YGLTET G + C WK +WN L+ ERAR+KARQGV T+GL +DV+ P+T +V D +
Sbjct: 335 YGLTETYGPALVCVWKPEWNGLSAEERARIKARQGVATVGLQGLDVLDPDTMKAVPRDAK 394
Query: 281 SQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISG 340
+ GEI+ R ++M GY KD++ + + W++TGD+GV+H DGY+E+KDRSKD+IISG
Sbjct: 395 TIGEIMIRGHTVMKGYFKDEDATRKAF-EGGWYHTGDLGVMHPDGYVEVKDRSKDIIISG 453
Query: 341 GENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR 400
GENISS EVESVL+ +P I E A+VA+ DK WG+ PCAFV+L+ E + + I+ +CR
Sbjct: 454 GENISSIEVESVLFKHPQIMEAAVVARPDKHWGESPCAFVTLR-EGAMGVNADTIVAYCR 512
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
LP + K+++ ELPKT TGK+QKF LRE+ A+
Sbjct: 513 EHLPKFYVPKTIVF-CELPKTTTGKVQKFKLREMAKAL 549
>gi|125542244|gb|EAY88383.1| hypothetical protein OsI_09845 [Oryza sativa Indica Group]
Length = 578
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 208/442 (47%), Positives = 283/442 (64%), Gaps = 15/442 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + V+ +L HSE+K+ FVDYQ LA AL + V + DD+ + +
Sbjct: 97 RLDARAVAGILRHSEAKVFFVDYQYVRLASDALQIVADEGRHVPLVAVIDDIDVPTGVRL 156
Query: 65 GHPNFKWVQPES-----------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G ++ + EWD + LNYTSGTTS+PKGVV+ HRG ++ T+S L+
Sbjct: 157 GELEYEGLVARGDPAAELPSLADEWDAVTLNYTSGTTSAPKGVVYSHRGAYLSTMSLLMS 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + ++PV+LWTLPMFH NGW+++WGMAA GG N+C+R IY I HGVTH+C A
Sbjct: 217 WVVGDEPVYLWTLPMFHCNGWTFTWGMAARGGVNVCIRDARAADIYRAIARHGVTHLCCA 276
Query: 174 LVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VV N+L + K L PV +LT GA PPAA+L R E +GF V+H+YGLTE G +
Sbjct: 277 PVVFNILLEGGEAAAKQLAAPVHVLTGGAPPPAALLERVERIGFRVTHAYGLTEATGPAL 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
+C W++QW+ L ERARLK+RQGV + LAD DV +T SV DG++ GEIV R S
Sbjct: 337 ACEWRAQWDRLPLPERARLKSRQGVSVLSLADADVKDAKTMASVPRDGKTVGEIVLRGSS 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
IM GYL + E +S + +WF TGD+GVVH+DGY+EIKDRSKDVIISGGENI S EVE
Sbjct: 397 IMKGYLNNPEANSDAFK-GEWFLTGDVGVVHADGYIEIKDRSKDVIISGGENICSKEVEE 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VL+ +PA+ + A+VA WG+ PCAFV + + + E+ ++ FCR + +M K
Sbjct: 456 VLFQHPAVADAAVVAMPHPHWGETPCAFVVAR-DKAAGVCEDDVVAFCRKHMARFMVPKK 514
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V++ D +P+ GK++K +LRE
Sbjct: 515 VVVYDAIPRNGNGKVEKNLLRE 536
>gi|225457528|ref|XP_002270022.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
Length = 566
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/454 (47%), Positives = 292/454 (64%), Gaps = 24/454 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-PSNTILPKPVLIH--DDVSAT-- 59
R D VS LL HSE+K++FVDYQ A AL + + T LP+ VLI D + T
Sbjct: 106 RHDSAMVSTLLKHSEAKMIFVDYQLLDTAQGALEILSKTRTKLPRLVLIPECDKLQPTIS 165
Query: 60 -SSPTV------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
S PTV G +F P EWDP+ALNYTSGTTS PKGV++ HRG +
Sbjct: 166 NSGPTVAGDLEYETLIAMGKTDFDIRWPNDEWDPIALNYTSGTTSRPKGVIYSHRGAHLN 225
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++++++ + + PV+LWT+PMFH NGW +WG+AA GGTN+CLR V I+ I H
Sbjct: 226 SLAAVLLNEMGSMPVYLWTVPMFHCNGWCLTWGVAAQGGTNVCLRNVTAKGIFDSISQHR 285
Query: 167 VTHICGALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH+ GA VLNM+ ++P +PL V ++T GA PP VL + LGF V HSYGLT
Sbjct: 286 VTHMGGAPTVLNMIINAPVGDQRPLPGKVAVMTGGAPPPPQVLFNMKELGFGVFHSYGLT 345
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G C WK +W+ L ++A++ ARQG+ +G+ ++D+ P T SV D ++ GE
Sbjct: 346 ETYGPGTVCTWKPEWDLLPPDKQAKINARQGLHHLGMEEVDIKDPVTMKSVPPDAKTIGE 405
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++FR ++M GYLKD + + + WF +GD+GV H DGY+E+KDRSKD+IISGGENI
Sbjct: 406 VMFRGNTVMNGYLKDIKATEESFK-GGWFRSGDLGVKHPDGYIELKDRSKDIIISGGENI 464
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
S+ EVE+VL+ +PAI E A+V + D WG+ PCAFV LK + E II+FCR +LP
Sbjct: 465 STIEVEAVLFSHPAILEAAVVGRPDDHWGETPCAFVKLKEGCNANANE--IIKFCRNKLP 522
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
HYMA K+V+ D LPKT+TGK QK++L+E A+
Sbjct: 523 HYMAPKTVVFYD-LPKTSTGKTQKYILKEKAKAM 555
>gi|22758279|gb|AAN05507.1| Putative AMP-binding protein [Oryza sativa Japonica Group]
gi|108706040|gb|ABF93835.1| AMP-dependent synthetase and ligase family protein, putative,
expressed [Oryza sativa Japonica Group]
gi|125542276|gb|EAY88415.1| hypothetical protein OsI_09875 [Oryza sativa Indica Group]
gi|125606385|gb|EAZ45421.1| hypothetical protein OsJ_30070 [Oryza sativa Japonica Group]
Length = 548
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/449 (47%), Positives = 285/449 (63%), Gaps = 18/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI---LPKPVLIHDD-VSATS 60
R D +S LL HS +K+ FV+ + AAL +T LP + I DD A
Sbjct: 94 RHDAAMISTLLSHSGAKVFFVESHLLDVGRAALRRLAGSTSAASLPVLLTISDDGAGARD 153
Query: 61 SPTVGHPN--------FKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
S V + + F P E DP+ LNYTSGTTS PKGVV+ HRG ++ T+++++
Sbjct: 154 SGCVDYEDLVRDAPSEFDIRWPVDEMDPITLNYTSGTTSRPKGVVYNHRGAYLNTIATVL 213
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ I P +LWT+PMFH NGW+ WG+A GGTNICLR +I+ I HGVTH+ G
Sbjct: 214 AYDITAMPTYLWTVPMFHCNGWNLPWGVAMQGGTNICLRHFTAKVIFDSIARHGVTHMGG 273
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VLNM++++P+ + L PV+++T GA+PP VLL E LGFV+ H YGLTET G
Sbjct: 274 APTVLNMIANAPAADRRALPGPVRVMTGGAAPPPRVLLAVEELGFVLYHIYGLTETYGPA 333
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C W +W+ L ERARLKARQG I + D+ V + T +V +DGQ+ GE++FR
Sbjct: 334 TVCTWMPEWDALPAEERARLKARQGFHHIAVQDVAVKNSATMENVPYDGQTVGEVMFRGN 393
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GY KD + M W ++GD+ V H DGY+++KDR+KD+IISGGENISS EVE
Sbjct: 394 TVMSGYYKDIGATKESMA-GGWLHSGDLAVRHPDGYIQLKDRAKDIIISGGENISSIEVE 452
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SV++ +PA+ E A+VA+ D +WG+ PCAFV LK TE II FCR RLPHYMA K
Sbjct: 453 SVIFSHPAVLEAAVVARPDDYWGETPCAFVKLK--DGANATEGEIISFCRERLPHYMAPK 510
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
+V+ D+LPKT+TGK QKFVLRE A+
Sbjct: 511 TVVF-DDLPKTSTGKTQKFVLREKARAMG 538
>gi|297600278|ref|NP_001048877.2| Os03g0133600 [Oryza sativa Japonica Group]
gi|255674181|dbj|BAF10791.2| Os03g0133600, partial [Oryza sativa Japonica Group]
Length = 499
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/449 (47%), Positives = 285/449 (63%), Gaps = 18/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI---LPKPVLIHDD-VSATS 60
R D +S LL HS +K+ FV+ + AAL +T LP + I DD A
Sbjct: 45 RHDAAMISTLLSHSGAKVFFVESHLLDVGRAALRRLAGSTSAASLPVLLTISDDGAGARD 104
Query: 61 SPTVGHPN--------FKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
S V + + F P E DP+ LNYTSGTTS PKGVV+ HRG ++ T+++++
Sbjct: 105 SGCVDYEDLVRDAPSEFDIRWPVDEMDPITLNYTSGTTSRPKGVVYNHRGAYLNTIATVL 164
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ I P +LWT+PMFH NGW+ WG+A GGTNICLR +I+ I HGVTH+ G
Sbjct: 165 AYDITAMPTYLWTVPMFHCNGWNLPWGVAMQGGTNICLRHFTAKVIFDSIARHGVTHMGG 224
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VLNM++++P+ + L PV+++T GA+PP VLL E LGFV+ H YGLTET G
Sbjct: 225 APTVLNMIANAPAADRRALPGPVRVMTGGAAPPPRVLLAVEELGFVLYHIYGLTETYGPA 284
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C W +W+ L ERARLKARQG I + D+ V + T +V +DGQ+ GE++FR
Sbjct: 285 TVCTWMPEWDALPAEERARLKARQGFHHIAVQDVAVKNSATMENVPYDGQTVGEVMFRGN 344
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GY KD + M W ++GD+ V H DGY+++KDR+KD+IISGGENISS EVE
Sbjct: 345 TVMSGYYKDIGATKESMA-GGWLHSGDLAVRHPDGYIQLKDRAKDIIISGGENISSIEVE 403
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SV++ +PA+ E A+VA+ D +WG+ PCAFV LK TE II FCR RLPHYMA K
Sbjct: 404 SVIFSHPAVLEAAVVARPDDYWGETPCAFVKLK--DGANATEGEIISFCRERLPHYMAPK 461
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
+V+ D+LPKT+TGK QKFVLRE A+
Sbjct: 462 TVVF-DDLPKTSTGKTQKFVLREKARAMG 489
>gi|172065065|ref|YP_001815777.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
gi|171997307|gb|ACB68224.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
Length = 550
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/442 (46%), Positives = 275/442 (62%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E KLL VD + +PL AL P+ P V+ +D A P +
Sbjct: 103 RLDADGIAFILRHGECKLLLVDRELAPLVKKALQSVPN----PPRVIDINDHEAPDGPAI 158
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F +P EW P+ALNYTSGTT PKGVV HRG +++++ + +
Sbjct: 159 GETDYESLLASGDPEFAGRRPADEWTPIALNYTSGTTGDPKGVVPSHRGTYVMSLLQMTN 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P++LWTLPMFH NGW ++W + A GT++CLRKV+ I S I HGV H C A
Sbjct: 219 WPLPRAPIYLWTLPMFHANGWCFTWAITAAAGTHVCLRKVNAANILSAIAKHGVDHFCAA 278
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL ++S P + +PL R V++LT+G+ PAAVL ++GF V H YG+TE AG +
Sbjct: 279 PIVLAGIASVPPSELQPLPRRVRVLTAGSPAPAAVLEAAGAMGFDVDHVYGITEIAGTPI 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
SCAW +W+TLA ++ R+KARQGVR +M V T V D S GE++ R +
Sbjct: 339 SCAWHDEWDTLAPDQQGRMKARQGVRAAAFENMSVADLATLEPVPVDSTSCGEVLVRGNT 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M+GY K+ + ++ WF+TGD+ VVH DGY++I DRSKDVIISGGENISS EVE
Sbjct: 399 VMMGYFKNADATAKAFA-GGWFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEE 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
V+Y + A+VAQ D WG+ PCAF+ LK + S TE+ +I FCR RL H+ +
Sbjct: 458 VIYRMAGVLNAAVVAQPDDKWGETPCAFIELKPDASPI-TEQDVILFCRERLAHFKCPRR 516
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
VI ELPKTATGKIQKF LRE
Sbjct: 517 VIF-GELPKTATGKIQKFRLRE 537
>gi|115450503|ref|NP_001048852.1| Os03g0130100 [Oryza sativa Japonica Group]
gi|6063549|dbj|BAA85409.1| unnamed protein product [Oryza sativa Japonica Group]
gi|108706001|gb|ABF93796.1| acyl-activating enzyme 11, putative, expressed [Oryza sativa
Japonica Group]
gi|113547323|dbj|BAF10766.1| Os03g0130100 [Oryza sativa Japonica Group]
gi|125584795|gb|EAZ25459.1| hypothetical protein OsJ_09281 [Oryza sativa Japonica Group]
gi|215766808|dbj|BAG99036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 578
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/442 (46%), Positives = 282/442 (63%), Gaps = 15/442 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + V+ +L HSE+K+ FVDYQ LA AL + V + DD+ + +
Sbjct: 97 RLDARAVAGILRHSEAKVFFVDYQYVRLASDALQIVADEGRHVPLVAVIDDIDVPTGVRL 156
Query: 65 GHPNFKWVQPES-----------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G ++ + EWD + LNYTSGTTS+PKGVV+ HRG ++ T+S L+
Sbjct: 157 GELEYEGLVARGDPAAELPSLADEWDAVTLNYTSGTTSAPKGVVYSHRGAYLSTMSLLMS 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + ++PV+LWTLPMFH NGW+++WGMAA GG N+C+R IY I HGVTH+C A
Sbjct: 217 WVVGDEPVYLWTLPMFHCNGWTFTWGMAARGGVNVCIRDARAADIYRAIARHGVTHLCCA 276
Query: 174 LVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VV N+L + K L PV +LT GA PPAA+L R E +GF V+H+YGLTE G +
Sbjct: 277 PVVFNILLEGGEAAAKQLAAPVHVLTGGAPPPAALLERVERIGFRVTHAYGLTEATGPAL 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
+C W++QW+ L ERARLK+RQGV + LAD DV +T V DG++ GEIV R S
Sbjct: 337 ACEWRAQWDRLPLPERARLKSRQGVSVLSLADADVKDAKTMARVPRDGKTVGEIVLRGSS 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
IM GYL + E +S + +WF TGD+GVVH+DGY+EIKDRSKDVIISGGENI S EVE
Sbjct: 397 IMKGYLNNPEANSDAFK-GEWFLTGDVGVVHADGYIEIKDRSKDVIISGGENICSKEVEE 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VL+ +PA+ + A+VA WG+ PCAFV + + + E+ ++ FCR + +M K
Sbjct: 456 VLFQHPAVADAAVVAMPHPHWGETPCAFVVAR-DKAAGVCEDDVVAFCRKHMARFMVPKK 514
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V++ D +P+ GK++K +LRE
Sbjct: 515 VVVYDAIPRNGNGKVEKNLLRE 536
>gi|242042375|ref|XP_002468582.1| hypothetical protein SORBIDRAFT_01g048390 [Sorghum bicolor]
gi|241922436|gb|EER95580.1| hypothetical protein SORBIDRAFT_01g048390 [Sorghum bicolor]
Length = 583
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/446 (47%), Positives = 283/446 (63%), Gaps = 19/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKP-VLIHDDVSATSSPT 63
RLD V+ +L HS +KL FVDY LA AL L ++ P V + DD+ + +
Sbjct: 97 RLDAGAVATILRHSGAKLFFVDYDYVRLASDALRLLAADGTPAVPLVAVIDDIDSPTGAR 156
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P+ E EWD + LNYTSGTTS+PKGVV+ HRG ++ T S L+
Sbjct: 157 LGELEYEALVAHADPDADLPPLEDEWDAVTLNYTSGTTSAPKGVVYSHRGAYLSTTSLLL 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + +PV+LWTLPMFH NGW+++WGMAA GG N+C+R IY I H VTH+C
Sbjct: 217 QWGVTTEPVYLWTLPMFHCNGWTFTWGMAARGGVNVCIRDARPADIYRAIARHRVTHMCC 276
Query: 173 ALVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
A VV ++L + + + L+ PV +LT GA PPAA+L R E +GF V+H+YGLTE
Sbjct: 277 APVVFSILLEGQGAGDGAARQLEAPVHVLTGGAPPPAALLERVERIGFKVTHAYGLTEAT 336
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G ++C W+ QW+ L ERARLKARQGV + LAD DV + ET +SV DG++ GEIV
Sbjct: 337 GPALACEWRGQWDRLPLPERARLKARQGVSVLSLADADVKNAETMVSVPRDGKTVGEIVL 396
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R S+M GYL + E + R WF TGD+GVVH DGY+EIKDRSKDVIISGGENI S
Sbjct: 397 RGSSVMKGYLNNPEANENAFR-GGWFLTGDVGVVHQDGYIEIKDRSKDVIISGGENICSK 455
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE VL+ +PA+ + A+VA +WG+ PCAFV ++ + + +E+ ++ FCR R+ +M
Sbjct: 456 EVEEVLFRHPAVADAAVVAMPHPYWGETPCAFV-VRRNSAAELSEDDVLAFCRKRMARFM 514
Query: 408 AHKSVIIEDELPKTATGKIQKFVLRE 433
K V + LP+ A GK++K LRE
Sbjct: 515 VPKKVQVVGALPRNALGKVEKVKLRE 540
>gi|326489302|dbj|BAK01634.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 567
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/455 (46%), Positives = 293/455 (64%), Gaps = 31/455 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL----PKPVLIHD---DVS 57
RL+ V+ LL HS ++++ VD + LA +L + P ++I D D S
Sbjct: 103 RLNAPTVAFLLEHSSAEVVMVDQEFFSLAEDSLRIIADQKKCSFKKPLVIVIGDHTCDPS 162
Query: 58 ATSSP------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
A G P F W P+ EW +AL YTSGTTSSPKGVV HRG ++
Sbjct: 163 ALQDALRTGAIEYEKFLETGDPEFAWKPPQDEWKSIALGYTSGTTSSPKGVVLHHRGAYL 222
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+++S + W++ + V+LWTLPMFH NGW Y+W +AA+ GT+ICLR+V I+S I +
Sbjct: 223 MSLSGALVWKMNDGAVYLWTLPMFHCNGWCYTWTLAAICGTSICLRQVTAKAIFSAIANQ 282
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH CGA VVLN + ++P PL R V ++T+GA+PP +VL LGF VSH+YG
Sbjct: 283 GVTHFCGAPVVLNTIINAPPVDTILPLPRVVDVMTAGAAPPPSVLAAMSKLGFRVSHTYG 342
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L D ERARL++RQG+R +GL +DVV P++ V DG +
Sbjct: 343 LSETYGPSTVCAWKPEWDILPDDERARLQSRQGIRYVGLEGLDVVDPKSMAPVPADGSTL 402
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + ++ +N WF++GD+GV H DGY+E+KDR+KD+IISGGE
Sbjct: 403 GEIVMRGNAVMKGYLKNPKANAEAF-ENGWFHSGDLGVRHPDGYIEVKDRAKDIIISGGE 461
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-----IIE 397
NISS EVE +YM+PA+ E ++VA+ D+ WG+ PCAFV+LK + ++EA +I+
Sbjct: 462 NISSLEVEKAVYMHPAVLEASVVARADEQWGESPCAFVTLKDGVDS--SDEAAMAANVIK 519
Query: 398 FCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
FCR RLP Y KSV+ LPKTATGKI+K LR
Sbjct: 520 FCRERLPGYWVPKSVVF-GPLPKTATGKIKKHELR 553
>gi|116788879|gb|ABK25037.1| unknown [Picea sitchensis]
Length = 569
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/455 (47%), Positives = 289/455 (63%), Gaps = 31/455 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP----SNTILPKPVLIHDDVS--- 57
RLD + ++ LL HS + + VD L AL L S P V+I D+
Sbjct: 105 RLDARTIAFLLEHSRAVAVLVDQDFFMLLQEALGLMAKKHGSGFEPPFLVVIGDETCDEG 164
Query: 58 ----ATSSPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
A S V G P F+W P+ EW +AL YTSGTTSSPKGVV HRG ++
Sbjct: 165 NLKRALRSGAVEYEDFLQEGDPGFEWQPPDDEWQSIALGYTSGTTSSPKGVVLSHRGAYV 224
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
++ + + W + V+LWTLPMFH NGW Y+WGMAA GTNICLR+V IY+ I H
Sbjct: 225 ASLGAALAWEMKGSGVYLWTLPMFHCNGWCYAWGMAAFCGTNICLRQVTARAIYASIAEH 284
Query: 166 GVTHICGALVVLN-MLSSSPSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
VTH C A VVLN +++ P + P+ R + ++T+G++PPA+VL + E GF V+H+YGL
Sbjct: 285 KVTHFCAAPVVLNTVVNCDPQDRVPIPRGISVMTAGSAPPASVLAKMEEQGFRVTHTYGL 344
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
+ET G V CAWK +W++L T+RAR+ ARQGVR I L +DVV+P++ + V DG + G
Sbjct: 345 SETYGPSVVCAWKEEWDSLPPTDRARMNARQGVRYISLEGLDVVNPDSMVPVPADGSTVG 404
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R +M GYL++ E + R WF++GD+ V H DGY+EIKDRSKD+IISGGEN
Sbjct: 405 EIVMRGNMMMKGYLRNPEANRESFR-GGWFHSGDLAVKHPDGYIEIKDRSKDIIISGGEN 463
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA------IIE 397
ISS EVE+ LY +P + E ++VA+ D+ WG+ PCAF++LK S P E+ I+
Sbjct: 464 ISSVEVENALYGHPRVLEASVVARPDERWGETPCAFITLKG--SGDPNEDESRIGQDIMN 521
Query: 398 FCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
+CRARLP YM +SV+ LPKTATGK+QK +LR
Sbjct: 522 YCRARLPGYMVPRSVVF-GPLPKTATGKVQKHILR 555
>gi|390573408|ref|ZP_10253583.1| AMP-dependent synthetase and ligase [Burkholderia terrae BS001]
gi|389934633|gb|EIM96586.1| AMP-dependent synthetase and ligase [Burkholderia terrae BS001]
Length = 550
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/442 (46%), Positives = 275/442 (62%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E KLL VD + +PL AL P+ P V+ +D A P +
Sbjct: 103 RLDADGIAFILRHGECKLLLVDRELAPLVEKALQSVPN----PPRVIDINDHEAPDGPAI 158
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F +P EW P+ALNYTSGTT PKGVV HRG +++++ + +
Sbjct: 159 GETDYESLLASGDPAFAGRRPVDEWTPIALNYTSGTTGDPKGVVPSHRGTYLMSLLQMTN 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P++LWTLPMFH NGW ++W + A GT++CLRKV+ I S I HGV H C A
Sbjct: 219 WPLPRAPIYLWTLPMFHANGWCFTWAITAAAGTHVCLRKVNAANILSAIAEHGVDHFCAA 278
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL ++S P + +PL V++LT+G+ PAAVL ++GF V H +G+TE +G +
Sbjct: 279 PIVLAGIASVPQSELQPLPHRVRVLTAGSPAPAAVLEAVGAMGFDVDHVFGITEISGTPI 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
SCAW +W+TL ++ +LKARQGVR L M V T V D +S GE++ R +
Sbjct: 339 SCAWHDEWDTLPPEQQGKLKARQGVRAAALEKMSVADAATLEPVPADCKSCGEVLVRGNT 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M+GY K+ E ++ WF+TGD+ VVH DGY++I DRSKDVIISGGENISS EVE
Sbjct: 399 VMMGYFKNPEATAKAF-GGGWFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEE 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
V+Y P + A+VAQ D WG+ PCAF+ LK + + TEE +I FCR RL H+ +
Sbjct: 458 VIYRMPGVLNAAVVAQPDDKWGETPCAFIELKPD-APSITEEDVISFCRQRLAHFKCPRR 516
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
VI ELPKTATGKIQKF LRE
Sbjct: 517 VIF-GELPKTATGKIQKFRLRE 537
>gi|407715530|ref|YP_006836810.1| AMP-dependent synthetase and ligase [Cycloclasticus sp. P1]
gi|407255866|gb|AFT66307.1| AMP-dependent synthetase and ligase [Cycloclasticus sp. P1]
Length = 541
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/446 (45%), Positives = 281/446 (63%), Gaps = 19/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD K V+ L H+ESK +F+D + + + A+ + P + + D
Sbjct: 101 RLDVKSVAFQLDHAESKAVFIDAEFADVMATAVK---EAEVSPLVIDVEDATFGSRQAIG 157
Query: 55 DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
+V G+ F+W PE EW + LNYTSGTT +PKGVV+ HRG ++ +++++ W
Sbjct: 158 EVEYEMLVAEGNETFQWSLPEDEWQSITLNYTSGTTGNPKGVVYHHRGAYLNALNNIVTW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ N P++LWTLPMFH NGW + W +AA GTN+CLR V I+ +IK + H CGA
Sbjct: 218 DMGNHPIYLWTLPMFHCNGWCFPWSLAASAGTNVCLRSVLPKTIFKLIKSEKIDHFCGAP 277
Query: 175 VVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
VL ML ++P + ++ VK++T+GA+PPAAV+ + E + F V+H YGLTET G
Sbjct: 278 TVLTMLINTPEKHQQGIEHEVKVMTAGAAPPAAVIQKMEEMSFSVTHVYGLTETYGPCTV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +W+ L E+A L+ARQGVR+ L D+ V PET + DG S GE+ R ++
Sbjct: 338 CAWHDEWDELPSDEQAALRARQGVRSAMLEDLMVADPETLEPMPKDGVSMGEVFMRGNNV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ S + WF++GD+ V H DGY++IKDRSKD+IISGGENIS+ EVESV
Sbjct: 398 MKGYLKNPSASDEAFK-GGWFHSGDLAVWHEDGYIDIKDRSKDIIISGGENISTLEVESV 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PAI E A+VA+ D WG++PCAFV+LK + TE+ II FCR L HY A K V
Sbjct: 457 LYRHPAILEAAVVAKYDDVWGEKPCAFVTLK--EGENATEKEIISFCRKNLAHYKAPKYV 514
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ LPKT+TGKIQKF LRE N +
Sbjct: 515 VF-GGLPKTSTGKIQKFTLREQANEI 539
>gi|18394877|ref|NP_564116.1| acyl activating enzyme 1 [Arabidopsis thaliana]
gi|378548264|sp|F4HUK6.1|AAE1_ARATH RecName: Full=Probable acyl-activating enzyme 1, peroxisomal;
AltName: Full=AMP-binding protein 1; Short=AtAMPBP1
gi|332191865|gb|AEE29986.1| acyl activating enzyme 1 [Arabidopsis thaliana]
Length = 556
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/456 (45%), Positives = 294/456 (64%), Gaps = 31/456 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-------PSNTILPKPV------- 50
R D V+VLL HS +K++F D+Q +A A + P ++P+P+
Sbjct: 99 RHDSSLVAVLLRHSGTKVIFADHQFLQIAEGACEILSNKGDKVPILVLIPEPLTQSVSRK 158
Query: 51 ------LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
+ ++DV A +G +F+ ++P E D +++NYTSGTTSSPKGVV+ HRG +
Sbjct: 159 KRSEEMMEYEDVVA-----MGKSDFEVIRPTDECDAISVNYTSGTTSSPKGVVYSHRGAY 213
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ ++++++ + + P +LWT PMFH NGW WG+ A+GGTNICLR V I+ I
Sbjct: 214 LNSLAAVLLNEMHSSPTYLWTNPMFHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNISQ 273
Query: 165 HGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
H VTH+ GA +LNM+ ++P + KPL V +T A PPA V+ + E LGF + HSYG
Sbjct: 274 HKVTHMGGAPTILNMIINAPESEQKPLPGKVSFITGAAPPPAHVIFKMEELGFSMFHSYG 333
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G C WK +W++L E+A++KARQGV +GL ++ V P T ++ DG +
Sbjct: 334 LTETYGPGTICTWKPEWDSLPREEQAKMKARQGVNHLGLEEIQVKDPVTMRTLPADGVTM 393
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE+VFR ++M GYLK+ E + + WF++GD+GV H DGY+E+KDRSKD+IISGGE
Sbjct: 394 GEVVFRGNTVMNGYLKNPEATKEAFK-GGWFWSGDLGVKHPDGYIELKDRSKDIIISGGE 452
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVES L+ +P + E A+VA+ D++WG+ CAFV LK K + E +I +CR R
Sbjct: 453 NISSIEVESTLFTHPCVLEAAVVARPDEYWGETACAFVKLK--DGSKASAEELISYCRDR 510
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
LPHYMA +S++ ED LPKT+TGK+QKFVLR A+
Sbjct: 511 LPHYMAPRSIVFED-LPKTSTGKVQKFVLRTKAKAL 545
>gi|20799711|gb|AAM28618.1|AF503760_1 adenosine monophosphate binding protein 1 AMPBP1 [Arabidopsis
thaliana]
Length = 554
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/456 (45%), Positives = 294/456 (64%), Gaps = 31/456 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-------PSNTILPKPV------- 50
R D V+VLL HS +K++F D+Q +A A + P ++P+P+
Sbjct: 97 RHDSSLVAVLLRHSGTKVIFADHQFLQIAEGACEILSNKGDKVPILVLIPEPLTQSVSRK 156
Query: 51 ------LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
+ ++DV A +G +F+ ++P E D +++NYTSGTTSSPKGVV+ HRG +
Sbjct: 157 KRSEEMMEYEDVVA-----MGKSDFEVIRPTDECDAISVNYTSGTTSSPKGVVYSHRGAY 211
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ ++++++ + + P +LWT PMFH NGW WG+ A+GGTNICLR V I+ I
Sbjct: 212 LNSLAAVLLNEMHSSPTYLWTNPMFHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNISQ 271
Query: 165 HGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
H VTH+ GA +LNM+ ++P + KPL V +T A PPA V+ + E LGF + HSYG
Sbjct: 272 HKVTHMGGAPTILNMIINAPESEQKPLPGKVSFITGAAPPPAHVIFKMEELGFSMFHSYG 331
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G C WK +W++L E+A++KARQGV +GL ++ V P T ++ DG +
Sbjct: 332 LTETYGPGTICTWKPEWDSLPREEQAKMKARQGVNHLGLEEIQVKDPVTMRTLPADGVTM 391
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE+VFR ++M GYLK+ E + + WF++GD+GV H DGY+E+KDRSKD+IISGGE
Sbjct: 392 GEVVFRGNTVMNGYLKNPEATKEAFK-GGWFWSGDLGVKHPDGYIELKDRSKDIIISGGE 450
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVES L+ +P + E A+VA+ D++WG+ CAFV LK K + E +I +CR R
Sbjct: 451 NISSIEVESTLFTHPCVLEAAVVARPDEYWGETACAFVKLK--DGSKASAEELISYCRDR 508
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
LPHYMA +S++ ED LPKT+TGK+QKFVLR A+
Sbjct: 509 LPHYMAPRSIVFED-LPKTSTGKVQKFVLRTKAKAL 543
>gi|13937177|gb|AAK50082.1|AF372942_1 At1g20560/F2D10_4 [Arabidopsis thaliana]
gi|18700260|gb|AAL77740.1| At1g20560/F2D10_4 [Arabidopsis thaliana]
Length = 556
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/456 (45%), Positives = 294/456 (64%), Gaps = 31/456 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-------PSNTILPKPV------- 50
R D V+VLL HS +K++F D+Q +A A + P ++P+P+
Sbjct: 99 RHDSSLVAVLLRHSGTKVIFADHQFLQIADGACEILSNKGDKVPILVLIPEPLTQSVSRK 158
Query: 51 ------LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
+ ++DV A +G +F+ ++P E D +++NYTSGTTSSPKGVV+ HRG +
Sbjct: 159 KRSEEMMEYEDVVA-----MGKSDFEVIRPTDECDAISVNYTSGTTSSPKGVVYSHRGAY 213
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ ++++++ + + P +LWT PMFH NGW WG+ A+GGTNICLR V I+ I
Sbjct: 214 LNSLAAVLLNEMHSSPTYLWTNPMFHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNISQ 273
Query: 165 HGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
H VTH+ GA +LNM+ ++P + KPL V +T A PPA V+ + E LGF + HSYG
Sbjct: 274 HKVTHMGGAPTILNMIINAPESEQKPLPGKVSFITGAAPPPAHVIFKMEELGFSMFHSYG 333
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G C WK +W++L E+A++KARQGV +GL ++ V P T ++ DG +
Sbjct: 334 LTETYGPGTICTWKPEWDSLPREEQAKMKARQGVNHLGLEEIQVKDPVTMRTLPADGVTM 393
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE+VFR ++M GYLK+ E + + WF++GD+GV H DGY+E+KDRSKD+IISGGE
Sbjct: 394 GEVVFRGNTVMNGYLKNPEATKEAFK-GGWFWSGDLGVKHPDGYIELKDRSKDIIISGGE 452
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVES L+ +P + E A+VA+ D++WG+ CAFV LK K + E +I +CR R
Sbjct: 453 NISSIEVESTLFTHPCVLEAAVVARPDEYWGETACAFVKLK--DGSKASAEELISYCRDR 510
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
LPHYMA +S++ ED LPKT+TGK+QKFVLR A+
Sbjct: 511 LPHYMAPRSIVFED-LPKTSTGKVQKFVLRTKAKAL 545
>gi|255556324|ref|XP_002519196.1| AMP dependent ligase, putative [Ricinus communis]
gi|223541511|gb|EEF43060.1| AMP dependent ligase, putative [Ricinus communis]
Length = 564
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/454 (46%), Positives = 285/454 (62%), Gaps = 28/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS--NTILPKPVLIHDDVSATSSP 62
RLD ++ LL HS S ++ VD + LA A + N P +++ D S
Sbjct: 101 RLDAPTIAFLLGHSRSTVVMVDQEYFHLAEGAFKILAEKENNFSPPLLIVIADESCDPKQ 160
Query: 63 TV----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
G P F W PE EW +AL YTSGTT+SPKGVV HRG +++
Sbjct: 161 LQHALKRGAIEYEKFLENGDPEFAWKPPEDEWQSIALGYTSGTTASPKGVVLSHRGAYLM 220
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+S + W + V+LWTLPMFH NGW Y+W +AA+ GTNICLR+V +YS I + G
Sbjct: 221 ALSCAMIWGLNEGAVYLWTLPMFHCNGWCYTWSLAALCGTNICLRQVTAKAVYSAIANQG 280
Query: 167 VTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
VTH C A VVLN + ++P + PL R V + T+GA+PP ++L GF V+H+YGL
Sbjct: 281 VTHFCAAPVVLNTIVNAPKEEAILPLPRVVHVNTAGAAPPPSLLFAMSEKGFRVTHTYGL 340
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
+ET G CAWK +W++L ++ARL ARQGVR IGL +DVV +T V DG++ G
Sbjct: 341 SETYGPSTVCAWKPEWDSLPPIKQARLNARQGVRYIGLEGLDVVDTKTNKPVPADGKTMG 400
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R +M GYLK+ E + N WF++GD+ V H DGY+EIKDR+KD+IISGGEN
Sbjct: 401 EIVMRGNLVMKGYLKNPEANKEAFA-NGWFHSGDLAVKHPDGYIEIKDRNKDIIISGGEN 459
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTE----EAIIEFC 399
ISS EVE+VLY +PA+ EV++VA+ D+ WG+ PCAFV+LK E + K E E I++FC
Sbjct: 460 ISSLEVENVLYTHPAVFEVSVVAREDERWGESPCAFVTLK-EGTDKSDEGRLAEDIMKFC 518
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
++++P Y KSV+ LPKTATGKIQK VLR+
Sbjct: 519 KSKMPAYWVPKSVVF-GPLPKTATGKIQKHVLRD 551
>gi|8778599|gb|AAF79607.1|AC027665_8 F5M15.12 [Arabidopsis thaliana]
Length = 579
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/456 (45%), Positives = 294/456 (64%), Gaps = 31/456 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-------PSNTILPKPV------- 50
R D V+VLL HS +K++F D+Q +A A + P ++P+P+
Sbjct: 122 RHDSSLVAVLLRHSGTKVIFADHQFLQIAEGACEILSNKGDKVPILVLIPEPLTQSVSRK 181
Query: 51 ------LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
+ ++DV A +G +F+ ++P E D +++NYTSGTTSSPKGVV+ HRG +
Sbjct: 182 KRSEEMMEYEDVVA-----MGKSDFEVIRPTDECDAISVNYTSGTTSSPKGVVYSHRGAY 236
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ ++++++ + + P +LWT PMFH NGW WG+ A+GGTNICLR V I+ I
Sbjct: 237 LNSLAAVLLNEMHSSPTYLWTNPMFHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNISQ 296
Query: 165 HGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
H VTH+ GA +LNM+ ++P + KPL V +T A PPA V+ + E LGF + HSYG
Sbjct: 297 HKVTHMGGAPTILNMIINAPESEQKPLPGKVSFITGAAPPPAHVIFKMEELGFSMFHSYG 356
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G C WK +W++L E+A++KARQGV +GL ++ V P T ++ DG +
Sbjct: 357 LTETYGPGTICTWKPEWDSLPREEQAKMKARQGVNHLGLEEIQVKDPVTMRTLPADGVTM 416
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE+VFR ++M GYLK+ E + + WF++GD+GV H DGY+E+KDRSKD+IISGGE
Sbjct: 417 GEVVFRGNTVMNGYLKNPEATKEAFK-GGWFWSGDLGVKHPDGYIELKDRSKDIIISGGE 475
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVES L+ +P + E A+VA+ D++WG+ CAFV LK K + E +I +CR R
Sbjct: 476 NISSIEVESTLFTHPCVLEAAVVARPDEYWGETACAFVKLK--DGSKASAEELISYCRDR 533
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
LPHYMA +S++ ED LPKT+TGK+QKFVLR A+
Sbjct: 534 LPHYMAPRSIVFED-LPKTSTGKVQKFVLRTKAKAL 568
>gi|297832382|ref|XP_002884073.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329913|gb|EFH60332.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 596
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 216/452 (47%), Positives = 288/452 (63%), Gaps = 26/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKP---VLIHD------- 54
RLD +SVLL HSE+K+LFVD+Q +A AL L + K VLI
Sbjct: 140 RLDPSTLSVLLAHSEAKILFVDHQLLEIAHGALDLLAKSDRTRKSLKLVLISQSNDDGYD 199
Query: 55 -----------DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGL 103
D + G+ F+ ++P EWDP+++NYTSGTTS PKGVV+ HRG
Sbjct: 200 SSSSFASKYSFDYEYETLLKSGNTEFEIIKPRCEWDPISINYTSGTTSRPKGVVYSHRGA 259
Query: 104 FIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
++ +++++ ++ PV+LWT+PMFH NGW WG+AA GGTNICLRKV +I+ I
Sbjct: 260 YLNSLATVFLHQMSVYPVYLWTVPMFHCNGWCLIWGVAAQGGTNICLRKVSPKLIFKNIA 319
Query: 164 HHGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSY 221
H VTH+ GA VLNM+ +SP T KPL V+I+T G+ P +L + E LGF VSH Y
Sbjct: 320 MHKVTHMGGAPTVLNMIVNSPVTEHKPLPHRVEIMTGGSPPLPQILAKMEELGFNVSHLY 379
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQS 281
GLTET G C WK +W++L+ ER +LK+RQGV+ +GL +DV P T +V DG +
Sbjct: 380 GLTETYGPGTHCVWKPEWDSLSLEERTKLKSRQGVQHLGLEGLDVKDPVTMETVPDDGVT 439
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GE++FR ++M GY KD E + + DWF++GD+ V H DGY+EIKDR KDVIISGG
Sbjct: 440 MGEVMFRGNTVMSGYFKDLEATRKAF-EGDWFHSGDLAVKHPDGYIEIKDRLKDVIISGG 498
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRA 401
ENISS EVE VL + A+ E A+VA+ D WG+ PC FV LK EE II FCR
Sbjct: 499 ENISSVEVERVLCSHQAVLEAAVVARPDNHWGQTPCGFVKLKDGFDTIKPEE-IIGFCRD 557
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
LPHYMA K+++ D +PKT+TGK+QK++LR+
Sbjct: 558 HLPHYMAPKTIVFAD-IPKTSTGKVQKYLLRK 588
>gi|145323958|ref|NP_001077568.1| acyl activating enzyme 1 [Arabidopsis thaliana]
gi|332191866|gb|AEE29987.1| acyl activating enzyme 1 [Arabidopsis thaliana]
Length = 478
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/456 (45%), Positives = 294/456 (64%), Gaps = 31/456 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-------PSNTILPKPV------- 50
R D V+VLL HS +K++F D+Q +A A + P ++P+P+
Sbjct: 21 RHDSSLVAVLLRHSGTKVIFADHQFLQIAEGACEILSNKGDKVPILVLIPEPLTQSVSRK 80
Query: 51 ------LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
+ ++DV A +G +F+ ++P E D +++NYTSGTTSSPKGVV+ HRG +
Sbjct: 81 KRSEEMMEYEDVVA-----MGKSDFEVIRPTDECDAISVNYTSGTTSSPKGVVYSHRGAY 135
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ ++++++ + + P +LWT PMFH NGW WG+ A+GGTNICLR V I+ I
Sbjct: 136 LNSLAAVLLNEMHSSPTYLWTNPMFHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNISQ 195
Query: 165 HGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
H VTH+ GA +LNM+ ++P + KPL V +T A PPA V+ + E LGF + HSYG
Sbjct: 196 HKVTHMGGAPTILNMIINAPESEQKPLPGKVSFITGAAPPPAHVIFKMEELGFSMFHSYG 255
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G C WK +W++L E+A++KARQGV +GL ++ V P T ++ DG +
Sbjct: 256 LTETYGPGTICTWKPEWDSLPREEQAKMKARQGVNHLGLEEIQVKDPVTMRTLPADGVTM 315
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE+VFR ++M GYLK+ E + + WF++GD+GV H DGY+E+KDRSKD+IISGGE
Sbjct: 316 GEVVFRGNTVMNGYLKNPEATKEAFK-GGWFWSGDLGVKHPDGYIELKDRSKDIIISGGE 374
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVES L+ +P + E A+VA+ D++WG+ CAFV LK K + E +I +CR R
Sbjct: 375 NISSIEVESTLFTHPCVLEAAVVARPDEYWGETACAFVKLK--DGSKASAEELISYCRDR 432
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
LPHYMA +S++ ED LPKT+TGK+QKFVLR A+
Sbjct: 433 LPHYMAPRSIVFED-LPKTSTGKVQKFVLRTKAKAL 467
>gi|8886956|gb|AAF80642.1|AC069251_35 F2D10.4 [Arabidopsis thaliana]
Length = 581
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/456 (45%), Positives = 294/456 (64%), Gaps = 31/456 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-------PSNTILPKPV------- 50
R D V+VLL HS +K++F D+Q +A A + P ++P+P+
Sbjct: 124 RHDSSLVAVLLRHSGTKVIFADHQFLQIAEGACEILSNKGDKVPILVLIPEPLTQSVSRK 183
Query: 51 ------LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
+ ++DV A +G +F+ ++P E D +++NYTSGTTSSPKGVV+ HRG +
Sbjct: 184 KRSEEMMEYEDVVA-----MGKSDFEVIRPTDECDAISVNYTSGTTSSPKGVVYSHRGAY 238
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ ++++++ + + P +LWT PMFH NGW WG+ A+GGTNICLR V I+ I
Sbjct: 239 LNSLAAVLLNEMHSSPTYLWTNPMFHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNISQ 298
Query: 165 HGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
H VTH+ GA +LNM+ ++P + KPL V +T A PPA V+ + E LGF + HSYG
Sbjct: 299 HKVTHMGGAPTILNMIINAPESEQKPLPGKVSFITGAAPPPAHVIFKMEELGFSMFHSYG 358
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G C WK +W++L E+A++KARQGV +GL ++ V P T ++ DG +
Sbjct: 359 LTETYGPGTICTWKPEWDSLPREEQAKMKARQGVNHLGLEEIQVKDPVTMRTLPADGVTM 418
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE+VFR ++M GYLK+ E + + WF++GD+GV H DGY+E+KDRSKD+IISGGE
Sbjct: 419 GEVVFRGNTVMNGYLKNPEATKEAFK-GGWFWSGDLGVKHPDGYIELKDRSKDIIISGGE 477
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVES L+ +P + E A+VA+ D++WG+ CAFV LK K + E +I +CR R
Sbjct: 478 NISSIEVESTLFTHPCVLEAAVVARPDEYWGETACAFVKLK--DGSKASAEELISYCRDR 535
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
LPHYMA +S++ ED LPKT+TGK+QKFVLR A+
Sbjct: 536 LPHYMAPRSIVFED-LPKTSTGKVQKFVLRTKAKAL 570
>gi|170697406|ref|ZP_02888498.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
gi|170137737|gb|EDT05973.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
Length = 550
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 205/442 (46%), Positives = 272/442 (61%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E KLL VD + +PL AL P P V+ +D A P +
Sbjct: 103 RLDADGIAFILRHGECKLLLVDRELAPLVKKALQSVPH----PPRVIDINDHEAPDGPAI 158
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F +P EW P+ALNYTSGTT PKGVV HRG +++++ + +
Sbjct: 159 GETDYESLLASGDPEFAGRRPADEWTPIALNYTSGTTGDPKGVVPSHRGTYVMSLLQMTN 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P++LWTLPMFH NGW ++W + A GT++CLRKV+ I S I HGV H C A
Sbjct: 219 WPLPRAPIYLWTLPMFHANGWCFTWAITAAAGTHVCLRKVNAANILSAITEHGVDHFCAA 278
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL ++S P + +PL R V++LT+G+ PAAVL ++GF V H YG+TE AG +
Sbjct: 279 PIVLAGIASVPPSELQPLPRRVRVLTAGSPAPAAVLEAVGAMGFDVDHVYGITEIAGTPI 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
SCAW +W+TL ++ R+KARQGVR M V T V D S GE++ R +
Sbjct: 339 SCAWHDEWDTLPPDQQGRMKARQGVRAAAFESMSVTDLATLEPVPADSTSCGEVLVRGNT 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M+GY K+ + ++ WF+TGD+ VVH DGY++I DRSKDVIISGGENISS EVE
Sbjct: 399 VMMGYFKNADATAKAF-GGGWFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEE 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
V+Y + A+VAQ D WG+ PCAF+ LK + S TE+ +I FCR RL H+ +
Sbjct: 458 VIYRMAGVLNAAVVAQPDDKWGETPCAFIELKPDASHI-TEQDVILFCRERLAHFKCPRR 516
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
VI ELPKTATGKIQKF LRE
Sbjct: 517 VIF-GELPKTATGKIQKFRLRE 537
>gi|449432900|ref|XP_004134236.1| PREDICTED: acetate/butyrate--CoA ligase AAE7, peroxisomal-like
[Cucumis sativus]
gi|449503854|ref|XP_004162208.1| PREDICTED: acetate/butyrate--CoA ligase AAE7, peroxisomal-like
[Cucumis sativus]
Length = 567
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/453 (45%), Positives = 293/453 (64%), Gaps = 27/453 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS----NTILPKPVLIHDD----- 55
RL+ + +S LL HS S ++ VD + PLA AL++ + + P ++I D+
Sbjct: 103 RLNAQTISFLLGHSASAVVMVDQEFFPLAEEALNILAAKGDGHYKPPLLIVIGDENCDPE 162
Query: 56 ----------VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
+ +G+P + W PE EW + L YTSGTT+SPKGVV HRG ++
Sbjct: 163 ALKYALSKGAIEYEKFLEIGNPEYAWKPPEDEWQSITLGYTSGTTASPKGVVLSHRGAYV 222
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+++S+ + W + ++LWTLPMFH NGW Y+W +AA+ GT+ICLR+V +YS I H
Sbjct: 223 MSLSAGLVWGMNEGAIYLWTLPMFHCNGWCYTWALAALCGTSICLRQVTAKAVYSAIAKH 282
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
VTH C A VVLN + ++P PL V ++T+GA+PP +VL GF ++H+YG
Sbjct: 283 KVTHFCAAPVVLNTIVNAPKEDTILPLPHVVHVMTAGAAPPPSVLYAMSQKGFRITHTYG 342
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W++L +AR+ ARQGVR +GL +DVV+ +T V DG++
Sbjct: 343 LSETYGPSTICAWKPEWDSLPPEAQARMNARQGVRYVGLEGLDVVNTQTMQPVPSDGKTV 402
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + + N WF++GD+GV H DGY+EIKDRSKD+IISGGE
Sbjct: 403 GEIVMRGNAVMKGYLKNPKANKEAFA-NGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGE 461
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTE---EAIIEFC 399
NISS E+E+ LY +PAI EV++VA+ D+ WG+ PCAFV+LK ++ K + E I++FC
Sbjct: 462 NISSVEIENTLYQHPAILEVSVVARADERWGESPCAFVTLKSKIDKGDEQRMAEDIMKFC 521
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
++++P Y KSV+ ELPKTATGK+QK +LR
Sbjct: 522 KSKMPAYWVPKSVVF-GELPKTATGKVQKHLLR 553
>gi|398811475|ref|ZP_10570273.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
gi|398080560|gb|EJL71367.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Variovorax
sp. CF313]
Length = 555
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/445 (46%), Positives = 278/445 (62%), Gaps = 18/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L HSES+LL VD + LA A++L + L V I+D
Sbjct: 103 RLDVEGLAFILRHSESRLLLVDREFGALAKQAVALLDNPPFL---VDINDHEAPDGEAVG 159
Query: 55 DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
D+ + + G P+F V P E +P+ALNYTSGTT PKGVV HRG +++++ L DW
Sbjct: 160 DLDYETLLSEGDPDFDGVWPTDECEPIALNYTSGTTGDPKGVVPSHRGTYLMSLLQLTDW 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P PV+LWTLPMFH NGW ++W + A GT++C+RKV IY + H H C A
Sbjct: 220 AVPKAPVYLWTLPMFHANGWCFTWAITAAAGTHVCMRKVTAAGIYKALADHKADHFCAAP 279
Query: 175 VVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
V+ +L + +PL V++LT+G+ PPAAVL +GF V H YG+TE +G VS
Sbjct: 280 TVMGLLVNARDEERRPLPGRVRVLTAGSPPPAAVLEAAAVMGFDVDHVYGITEVSGTPVS 339
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW+ W+ L+ ER RL+ARQGVR L + VV PET V DG + GE+V R ++
Sbjct: 340 CAWQPAWDGLSAAERGRLQARQGVRAAALEGLQVVDPETMRPVPFDGTTAGELVIRGNTV 399
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + + WF TGDI VVH+DGY++I DRSKDVIISGGENISS EVE +
Sbjct: 400 MKGYLKNTASTQKAF-EGGWFRTGDIAVVHADGYVQITDRSKDVIISGGENISSVEVEDI 458
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L+ +P+I A+VAQ D+ WG+ PCAF+ LK E S E +I FCR RL H+ + V
Sbjct: 459 LHRHPSILYAAVVAQPDEKWGEVPCAFIELKPE-SLGLQESEVIAFCRERLAHFKCPRKV 517
Query: 413 IIEDELPKTATGKIQKFVLREIVNA 437
+ LPKTATGKIQKF LRE+ +
Sbjct: 518 VFT-ALPKTATGKIQKFRLRELAGS 541
>gi|171315908|ref|ZP_02905137.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
gi|171098911|gb|EDT43701.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
Length = 550
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/442 (46%), Positives = 271/442 (61%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E KLL VD + +PL AL P P V+ +D A P +
Sbjct: 103 RLDADGIAFILRHGECKLLLVDRELAPLVAKALQSVPH----PPRVIDINDHEAPDGPAI 158
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F +P EW P+ALNYTSGTT PKGVV HRG +++++ + +
Sbjct: 159 GETDYESLLASGDPEFAGRRPADEWTPIALNYTSGTTGDPKGVVPSHRGTYVMSLLQMTN 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P++LWTLPMFH NGW ++W + A GT++CLRKV+ I S I HGV H C A
Sbjct: 219 WPLPRAPIYLWTLPMFHANGWCFTWAITAAAGTHVCLRKVNAANILSAIAEHGVDHFCAA 278
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL ++S P + +PL R V++LT+G+ PAAVL ++GF V H YG+TE AG +
Sbjct: 279 PIVLAGIASVPPSELQPLPRRVRVLTAGSPAPAAVLEAVGAMGFDVDHVYGITEIAGTPI 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
SCAW +W+TL ++ RLKARQGVR +M V V D GE++ R +
Sbjct: 339 SCAWHDEWDTLPPEQQGRLKARQGVRAAAFENMTVADLAALEPVPADSACCGEVLVRGNT 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M+GY K+ + ++ WF+TGD+ VVH DGY++I DRSKDVIISGGENISS EVE
Sbjct: 399 VMMGYFKNADATAKAFA-GGWFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEE 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
V+Y + A+VAQ D WG+ PCAF+ LK + S TE+ +I FCR RL H+ +
Sbjct: 458 VIYRMSGVLNAAVVAQPDDKWGETPCAFIELKPDASHI-TEQDVISFCRERLAHFKCPRR 516
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
VI ELPKTATGKIQKF LRE
Sbjct: 517 VIF-GELPKTATGKIQKFRLRE 537
>gi|29893231|gb|AAP03024.1| acyl-activating enzyme 11 [Arabidopsis thaliana]
Length = 572
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/453 (45%), Positives = 288/453 (63%), Gaps = 20/453 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKP-VLIHDDVSATSSPT 63
RLD K ++++L H+E K+LFVDY+ +PL L L P++ P +++ +++ +T+ P
Sbjct: 97 RLDAKTIAIILRHAEPKILFVDYEFAPLIQEVLRLIPTDQSQAHPRIILINEIDSTTKPF 156
Query: 64 VGHPNFKWV------QPES---------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
+++ + P S E DP++LNYTSGTT+ PKGVV HRG ++ +
Sbjct: 157 SKELDYEGLIRKGEPTPSSSASMFRVHNEHDPISLNYTSGTTADPKGVVISHRGAYLSAL 216
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
SS+I W + PV+LWTLPMFH NGW+++W +AA GGTN+C+R V P IY I+ HGVT
Sbjct: 217 SSIIGWEMGIFPVYLWTLPMFHCNGWTHTWSVAARGGTNVCIRHVTAPEIYKNIELHGVT 276
Query: 169 HICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+ V L S P PV++LT G+SPPA ++ + E LGF V H YGLTE
Sbjct: 277 HMSCVPTVFRFLLEGSRTDQSPKSSPVQVLTGGSSPPAVLIKKVEQLGFHVMHGYGLTEA 336
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G V+ C W+ +WN L + ++ L+ RQGVR + LAD+DV + +T SV DG++ GEIV
Sbjct: 337 TGPVLFCEWQDEWNKLPEHQQMELQQRQGVRNLTLADVDVKNTKTLESVPRDGKTMGEIV 396
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+ S+M GYLK+ + +S + + W TGDIGV+H DGY+EIKDRSKD+IISGGENISS
Sbjct: 397 IKGSSLMKGYLKNPKATSEAFK-HGWLNTGDIGVIHPDGYVEIKDRSKDIIISGGENISS 455
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPH 405
EVE VLYM + E A+VA WG+ PCAFV LK + T E +I++CR +PH
Sbjct: 456 IEVEKVLYMYQQVLEAAVVAMPHPLWGETPCAFVVLKKGDEESVTSEGDLIKYCRENMPH 515
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+M K V+ ELPK + GKI K LR+I A+
Sbjct: 516 FMCPKKVVFFQELPKNSNGKILKSKLRDIAKAL 548
>gi|398861342|ref|ZP_10616975.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
gi|398233450|gb|EJN19382.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM79]
Length = 550
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/440 (45%), Positives = 275/440 (62%), Gaps = 16/440 (3%)
Query: 4 QRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA----T 59
RLD ++ +L HSE KLL VD + +A AAL + P ++I D ++
Sbjct: 102 HRLDADGIAFILRHSECKLLLVDCEYMAVASAALEQL---ELRPALIIIRDHLATVCVDA 158
Query: 60 SSPTV------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
+P G P FK V P +EW P+ALNYTSGTT PKGVV HRG +++T+ + +
Sbjct: 159 DAPDYEALLAEGDPQFKGVWPTTEWLPIALNYTSGTTGDPKGVVVSHRGTYLMTLLQMTN 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P +LWTLPMFH NGW ++W +AA GT+ICLRKV ++ I H H C A
Sbjct: 219 WSLPQAPRYLWTLPMFHANGWCFTWAIAAAAGTHICLRKVSAENVFDAISRHKADHFCAA 278
Query: 174 LVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
V+ M++++P L V++LT+G+ PPA VL S+GF V H YG+TE AG +SC
Sbjct: 279 PTVMAMIANAPKPPVLSHSVRVLTAGSPPPATVLDAVVSMGFQVDHVYGITEVAGTPISC 338
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
W+ W+ L+ E+A ++ RQG R + V ET V HDGQ+ GE++ R ++M
Sbjct: 339 VWQDGWDELSAPEKAGMRVRQGSRAAAFEGLMVADSETLAPVPHDGQTTGELLLRGNTVM 398
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
+GYLK++ + + WF+TGD+ VVH +GY++I DR KDVIISGGENISS E+E +L
Sbjct: 399 MGYLKNEAATQKAF-EGGWFHTGDVAVVHPNGYMQITDRCKDVIISGGENISSVEIEDIL 457
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
+ + ++ A+VAQ D WG+ PCAF+ LK E S++PTE +I FC+ARL Y VI
Sbjct: 458 HGHTSVLHAAVVAQPDDKWGEVPCAFIELKSE-SQQPTEAELIAFCKARLARYKCPSRVI 516
Query: 414 IEDELPKTATGKIQKFVLRE 433
ELPKTATGKIQKF+LR+
Sbjct: 517 FM-ELPKTATGKIQKFILRQ 535
>gi|56695582|ref|YP_165932.1| acyl-CoA synthetase [Ruegeria pomeroyi DSS-3]
gi|56677319|gb|AAV93985.1| AMP-binding protein [Ruegeria pomeroyi DSS-3]
Length = 542
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 209/445 (46%), Positives = 282/445 (63%), Gaps = 17/445 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD ++ +L H+E+++L VD + S + AL+ +L V I D A +P
Sbjct: 104 RLDAPIIAFILSHAEARVLIVDPEFSEVVRDALAQIDRPDLLV--VDIEDPSFAGGAPVG 161
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P+F W P EWD +ALNYTSGTT +PKGVV+ HRG + S+++ W
Sbjct: 162 TLSYDALLAEGDPDFDWSLPGDEWDAIALNYTSGTTGNPKGVVYHHRGAALNATSNILTW 221
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P V+LWTLPMFH NGW + W MAA G ++CLR V IY + VTH CGA
Sbjct: 222 GMPQHAVYLWTLPMFHCNGWCFPWTMAANAGVSVCLRAVRDEPIYRAFREEKVTHFCGAP 281
Query: 175 VVLNMLSSSPS-TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
+VLNML+++P K D +K++T+GA PPAAV+ + E++G V+H YGLTET G V C
Sbjct: 282 IVLNMLANAPDHMKDFDHQIKVMTAGAPPPAAVIEKMEAMGVDVTHVYGLTETYGPSVVC 341
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
AWK +W+ ERA LK RQGVR + L+ + V PET V DG++ GEI + +M
Sbjct: 342 AWKEEWDGRPGAERAALKVRQGVRYVALSGLMVADPETLEPVPADGETMGEIFMQGNIVM 401
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GYLK+ + + R WF +GD+GV+H DGY+ +KDRSKD+IISGGENISS EVE VL
Sbjct: 402 KGYLKNPDATDRAFR-GGWFASGDLGVMHPDGYIALKDRSKDIIISGGENISSVEVEDVL 460
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +PA+ E A+VA+ D+ WG+ PCAFV LK S + + +I CRA + H+ A K+V+
Sbjct: 461 YKHPAVMEAAVVARPDEKWGETPCAFVELKPGQSVEAAD--LIAHCRANMAHFKAPKTVV 518
Query: 414 IEDELPKTATGKIQKFVLREIVNAV 438
ELPKT+TGKIQKF+LRE A+
Sbjct: 519 F-GELPKTSTGKIQKFLLRERARAL 542
>gi|15218935|ref|NP_176786.1| AMP-dependent synthetase and ligase-like protein [Arabidopsis
thaliana]
gi|75308878|sp|Q9C8D4.1|AAE11_ARATH RecName: Full=Butyrate--CoA ligase AAE11, peroxisomal; AltName:
Full=Acyl-activating enzyme 11; AltName:
Full=Butyryl-CoA synthetase
gi|12322610|gb|AAG51304.1|AC026480_11 AMP-binding enzyme, putative [Arabidopsis thaliana]
gi|28393804|gb|AAO42311.1| putative AMP-binding enzyme [Arabidopsis thaliana]
gi|133778844|gb|ABO38762.1| At1g66120 [Arabidopsis thaliana]
gi|332196343|gb|AEE34464.1| AMP-dependent synthetase and ligase-like protein [Arabidopsis
thaliana]
Length = 572
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/453 (45%), Positives = 289/453 (63%), Gaps = 20/453 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKP-VLIHDDVSATSSPT 63
RLD K ++++L H+E K+LFVDY+ +PL L L P+ P P +++ +++ +T+ P
Sbjct: 97 RLDAKTIAIILRHAEPKILFVDYEFAPLIQEVLRLIPTYQSQPHPRIILINEIDSTTKPF 156
Query: 64 VGHPNFKWV----QP-----------ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
+++ + +P +E DP++LNYTSGTT+ PKGVV H+G ++ +
Sbjct: 157 SKELDYEGLIRKGEPTPSSSASMFRVHNEHDPISLNYTSGTTADPKGVVISHQGAYLSAL 216
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
SS+I W + PV+LWTLPMFH NGW+++W +AA GGTN+C+R V P IY I+ HGVT
Sbjct: 217 SSIIGWEMGIFPVYLWTLPMFHCNGWTHTWSVAARGGTNVCIRHVTAPEIYKNIELHGVT 276
Query: 169 HICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+ V L S P PV++LT G+SPPA ++ + E LGF V H YGLTE
Sbjct: 277 HMSCVPTVFRFLLEGSRTDQSPKSSPVQVLTGGSSPPAVLIKKVEQLGFHVMHGYGLTEA 336
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G V+ C W+ +WN L + ++ L+ RQGVR + LAD+DV + +T SV DG++ GEIV
Sbjct: 337 TGPVLFCEWQDEWNKLPEHQQIELQQRQGVRNLTLADVDVKNTKTLESVPRDGKTMGEIV 396
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+ S+M GYLK+ + +S + + W TGDIGV+H DGY+EIKDRSKD+IISGGENISS
Sbjct: 397 IKGSSLMKGYLKNPKATSEAFK-HGWLNTGDIGVIHPDGYVEIKDRSKDIIISGGENISS 455
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL-KWELSKKPTEEAIIEFCRARLPH 405
EVE VLYM + E A+VA WG+ PCAFV L K E +E +I++CR +PH
Sbjct: 456 IEVEKVLYMYQEVLEAAVVAMPHPLWGETPCAFVVLKKGEEGLVTSEGDLIKYCRENMPH 515
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+M K V+ ELPK + GKI K LR+I A+
Sbjct: 516 FMCPKKVVFFQELPKNSNGKILKSKLRDIAKAL 548
>gi|255556322|ref|XP_002519195.1| AMP dependent ligase, putative [Ricinus communis]
gi|223541510|gb|EEF43059.1| AMP dependent ligase, putative [Ricinus communis]
Length = 565
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/452 (46%), Positives = 289/452 (63%), Gaps = 26/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL+ V+ LL HS+S+++ VD + LA AL + + KP L+ + P
Sbjct: 102 RLNASTVAFLLGHSKSEVVMVDQEFFSLAEEALEILAKSESSFKPALLIVIADKSCDPKS 161
Query: 65 ------------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
G P F W QPE EW +AL YTSGTT+SPKGVV HRG +++
Sbjct: 162 LKHALGRGAIEYEKFLESGDPEFAWKQPEDEWQSIALGYTSGTTASPKGVVLSHRGAYLM 221
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++S+ + W + V+LWTLPMFH NGW ++W +AA+ GTNICLR+V +YS I ++G
Sbjct: 222 SLSNPLIWGMNEGAVYLWTLPMFHCNGWCFTWSLAALCGTNICLRQVTAKAVYSAIANNG 281
Query: 167 VTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
V+H CGA VVLN + ++P + PL R V ++T+GA+PP +VL GF V+H+YGL
Sbjct: 282 VSHFCGAPVVLNTIVNAPKEETILPLPRIVHVMTAGAAPPPSVLFAMSEKGFRVTHTYGL 341
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
+ET G CAWK +W++ +ARL ARQGVR IGL +DVV P+T V DG++ G
Sbjct: 342 SETYGPSTVCAWKPEWDSQPPIVQARLNARQGVRYIGLEGLDVVDPKTMKPVPADGKTIG 401
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R +M GYLK+ + + N WF++GD+ V H D Y+EIKDRSKD+IISGGEN
Sbjct: 402 EIVMRGNIVMKGYLKNPKANEEAFA-NGWFHSGDLAVKHPDNYMEIKDRSKDIIISGGEN 460
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSK---KPTEEAIIEFCR 400
ISS EVE++LY +PA+ E ++VA+ D+ WG+ PCAFV+LK +++ + E +I+F R
Sbjct: 461 ISSLEVENILYTHPAVYEASVVARPDEQWGESPCAFVTLKPGVNRSDERYLAEELIKFSR 520
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
+++P Y KSV+ LPKTATGKIQK VLR
Sbjct: 521 SKMPAYWVPKSVVF-GPLPKTATGKIQKHVLR 551
>gi|212275534|ref|NP_001130745.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
gi|194690002|gb|ACF79085.1| unknown [Zea mays]
gi|195613958|gb|ACG28809.1| AMP-binding protein [Zea mays]
gi|414866443|tpg|DAA45000.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 567
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/456 (46%), Positives = 289/456 (63%), Gaps = 33/456 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT--ILPKPVLIHDDVSATSSP 62
RL+ V+ LL HS ++++ VD + LA +L + +P+LI AT P
Sbjct: 103 RLNAATVAFLLEHSSAEVVMVDQEFFTLAEDSLRIIADKKKGTFEQPLLIVIG-DATCDP 161
Query: 63 TV------------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
T G P F W P+ EW +AL YTSGTTS+PKGVV HRG +
Sbjct: 162 TTLQDALRKGAIDYEAFLESGDPEFAWRPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAY 221
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
++++S + W + V+LWTLPMFH NGW Y+W +AA+ GT+ICLR+V I+S I +
Sbjct: 222 LMSLSGALIWGMNEGAVYLWTLPMFHCNGWCYTWTLAALCGTSICLRQVSAKAIFSAIAN 281
Query: 165 HGVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSY 221
GVTH CGA VVLN + ++P PL R V ++T+GA+PP +VL LGF ++H+Y
Sbjct: 282 EGVTHFCGAPVVLNTIINAPPADTILPLPRVVNVMTAGAAPPPSVLAAMSKLGFRITHTY 341
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQS 281
GL+ET G CAWK +W+ L ERARL ARQGVR +GL +DVV P+T V DG +
Sbjct: 342 GLSETYGPSTVCAWKPEWDRLPADERARLHARQGVRYVGLEGLDVVDPKTMTPVPADGTT 401
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GEIV R +M GYLK+ E ++ +N WF++GD+GV H DGY+E++DR+KD+IISGG
Sbjct: 402 MGEIVMRGNGVMKGYLKNPEANAEAF-ENGWFHSGDLGVRHGDGYVEVRDRAKDIIISGG 460
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-----II 396
ENISS EVE +Y++PA+ E ++VA+ D+ WG+ PCAFV+LK + + ++EA I+
Sbjct: 461 ENISSLEVEKAVYLHPAVLEASVVARADERWGESPCAFVTLKDAVDR--SDEAALARDIM 518
Query: 397 EFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
FCR +LP Y KSV+ LPKTATGKI+K LR
Sbjct: 519 RFCREKLPGYWVPKSVVF-GPLPKTATGKIKKHELR 553
>gi|195616080|gb|ACG29870.1| AMP-binding protein [Zea mays]
Length = 567
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/456 (46%), Positives = 289/456 (63%), Gaps = 33/456 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT--ILPKPVLIHDDVSATSSP 62
RL+ V+ LL HS ++++ VD + LA +L + +P+LI AT P
Sbjct: 103 RLNAATVAFLLEHSSAEVVMVDQEFFTLAEDSLRIIADKKKGTFKQPLLIVIG-DATCDP 161
Query: 63 TV------------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
T G P F W P+ EW +AL YTSGTTS+PKGVV HRG +
Sbjct: 162 TALQDALRKGAIDYEAFLESGDPEFAWRPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAY 221
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
++++S + W + V+LWTLPMFH NGW Y+W +AA+ GT+ICLR+V I+S I +
Sbjct: 222 LMSLSGALIWGMNEGAVYLWTLPMFHCNGWCYTWTLAALCGTSICLRQVSAKAIFSAIAN 281
Query: 165 HGVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSY 221
GVTH CGA VVLN + ++P PL R V ++T+GA+PP +VL LGF ++H+Y
Sbjct: 282 EGVTHFCGAPVVLNTIINAPPADTILPLPRVVNVMTAGAAPPPSVLAAMSKLGFRITHTY 341
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQS 281
GL+ET G CAWK +W+ L ERARL ARQGVR +GL +DVV P+T V DG +
Sbjct: 342 GLSETYGPSTVCAWKPEWDRLPADERARLHARQGVRYVGLEGLDVVDPKTMAPVPADGTT 401
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GEIV R +M GYLK+ E ++ +N WF++GD+GV H DGY+E++DR+KD+IISGG
Sbjct: 402 MGEIVMRGNGVMKGYLKNPEANAEAF-ENGWFHSGDLGVRHGDGYVEVRDRAKDIIISGG 460
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-----II 396
ENISS EVE +Y++PA+ E ++VA+ D+ WG+ PCAFV+LK + + ++EA I+
Sbjct: 461 ENISSLEVEKAVYLHPAVLEASVVARADERWGESPCAFVTLKDAVDR--SDEAALARDIM 518
Query: 397 EFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
FCR +LP Y KSV+ LPKTATGKI+K LR
Sbjct: 519 RFCREKLPGYWVPKSVVF-GPLPKTATGKIKKHELR 553
>gi|242035977|ref|XP_002465383.1| hypothetical protein SORBIDRAFT_01g037610 [Sorghum bicolor]
gi|241919237|gb|EER92381.1| hypothetical protein SORBIDRAFT_01g037610 [Sorghum bicolor]
Length = 568
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/455 (46%), Positives = 285/455 (62%), Gaps = 30/455 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT--ILPKPVLIHDDVSATSSP 62
RL+ V+ LL HS ++++ VD + LA +L + +P+LI T P
Sbjct: 103 RLNAATVAFLLEHSSAEVVMVDQEFFTLAEDSLRIIADQKKGAFKQPLLIVIG-DPTCDP 161
Query: 63 TV------------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
T G P F W P+ EW +AL YTSGTTS+PKGVV HRG +
Sbjct: 162 TTLQDALRKGAIEYEAFLESGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAY 221
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
++++S + W + V+LWTLPMFH NGW Y+W +AA+ GT+ICLR+V I+S I +
Sbjct: 222 LMSLSGALIWGMNEGAVYLWTLPMFHCNGWCYTWTLAALCGTSICLRQVSAKAIFSAIAN 281
Query: 165 HGVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSY 221
GVTH CGA VVLN + ++P PL R V ++T+GA+PP +VL LGF ++H+Y
Sbjct: 282 QGVTHFCGAPVVLNTIVNAPPADTILPLPRVVDVMTAGAAPPPSVLAAMSKLGFRITHTY 341
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQS 281
GL+ET G CAWK +W++L ERARL ARQGVR +GL +DVV P+T V DG +
Sbjct: 342 GLSETYGPSTVCAWKPEWDSLPADERARLHARQGVRYVGLEGLDVVDPQTMAPVPADGTT 401
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GEIV R +M GYLK+ ++ +N WF++GD+GV H DGY+E++DR+KD+IISGG
Sbjct: 402 MGEIVMRGNGVMKGYLKNPRANAEAF-ENGWFHSGDLGVRHGDGYVEVRDRAKDIIISGG 460
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA----IIE 397
ENISS EVE +Y++PA+ E ++VA+ D+ WG+ PCAFV+LK + E A I+
Sbjct: 461 ENISSLEVEKAVYLHPAVLEASVVARADEQWGESPCAFVTLKDAAVDRSDEAALARDIMA 520
Query: 398 FCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
FCR RLP Y KSV+ LPKTATGKI+K LR
Sbjct: 521 FCRERLPGYWVPKSVVF-GPLPKTATGKIKKHELR 554
>gi|357120835|ref|XP_003562130.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Brachypodium
distachyon]
Length = 658
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 219/451 (48%), Positives = 281/451 (62%), Gaps = 23/451 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT---ILPKPVLIHDDVSATSS 61
R D VS LL HS +K+ FVD + AAL + LP V I DD + S
Sbjct: 203 RHDAAMVSALLKHSGAKVFFVDSSLLGVGKAALRRLADQSGAASLPILVTISDDADSGDS 262
Query: 62 PTVGHP------------NFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
G+ + +W P +E DP+ALNYTSGTTS PKGV++ HR ++ T++
Sbjct: 263 DRRGNEYEVLIKNAPSGFDIRW--PLNELDPIALNYTSGTTSRPKGVIYNHRATYLNTIA 320
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+++ + I P +LWT+PMFH NGW WG+A GGTNICL +I+ I H VTH
Sbjct: 321 TVLAYNITTMPTYLWTVPMFHCNGWHLPWGVAMQGGTNICLHHFTAKVIFDNIARHRVTH 380
Query: 170 ICGALVVLNMLSSS--PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
+ GA VLNM+ ++ KPL V ++T GA PP VL E LGF+V H YGLTET
Sbjct: 381 MGGAPTVLNMIINAVIADRKPLPGTVSVMTGGAPPPPHVLNGMEDLGFIVHHVYGLTETH 440
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G +C W +W+ L ERA+LKARQGV IG+ D+DV P+T SV HDGQ+ GE++F
Sbjct: 441 GPTTACTWMPEWDVLPAGERAQLKARQGVNHIGMQDVDVKSPDTMKSVPHDGQTVGEVMF 500
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R +IM GY KD + M W +TGD+ V H DGY+E+KDR+KD+IISGGENISS
Sbjct: 501 RGNTIMSGYYKDINATKESM-AGGWLHTGDLAVRHPDGYIELKDRAKDIIISGGENISSI 559
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVES+++ +PA+ E A+VA+ D WG+ PCAFV LK TE II FCR RLPHYM
Sbjct: 560 EVESMIFSHPAVLEAAVVARPDDHWGETPCAFVKLK--DGANATEAEIIGFCRERLPHYM 617
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
A K+V+ ED LPKT+TGK QKFVLRE A+
Sbjct: 618 APKTVVFED-LPKTSTGKTQKFVLREKARAM 647
>gi|297850474|ref|XP_002893118.1| adenosine monophosphate binding protein 1 AMPBP1 [Arabidopsis
lyrata subsp. lyrata]
gi|297338960|gb|EFH69377.1| adenosine monophosphate binding protein 1 AMPBP1 [Arabidopsis
lyrata subsp. lyrata]
Length = 555
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/458 (44%), Positives = 294/458 (64%), Gaps = 32/458 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-------PSNTILPKP-------- 49
R D V+VLL HS +K++F D+Q +A A + P ++P+P
Sbjct: 97 RHDSALVAVLLRHSGTKVIFADHQFLQIAQGACEILSKKGDKVPILVLVPEPLTQSVSGK 156
Query: 50 ------VLIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGL 103
++ ++DV A +G +F+ ++P E DP+++NYTSGTTSSPKGVV+ HRG
Sbjct: 157 KRSEEDIMEYEDVVA-----MGKSDFEVIRPTDECDPISVNYTSGTTSSPKGVVYSHRGA 211
Query: 104 FIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
++ ++++++ + + P +LWT PMFH NGW WG+ A+GGTNICLR V I+ +
Sbjct: 212 YLNSLAAVLLNEMHSSPTYLWTNPMFHCNGWCLLWGVTAIGGTNICLRNVTAKAIFDNVS 271
Query: 164 HHGVTHICGALVVLNMLSSSPSTKPLDRPVKI--LTSGASPPAAVLLRTESLGFVVSHSY 221
H VTH+ GA +LNM+ ++P ++ P K+ +T A PPA V+ + E LGF + HSY
Sbjct: 272 QHKVTHMGGAPTILNMIINAPESEQKSLPGKVSFITGAAPPPAHVIYKMEELGFSMFHSY 331
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQS 281
GLTET G C WK +W++L E+A++KARQGV IG+ ++ V P T ++ DG +
Sbjct: 332 GLTETYGPGTICTWKPEWDSLPREEQAKMKARQGVNHIGIEEIQVKDPVTMRTLPADGVT 391
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GE+VFR ++M GYLK+ E + + WF++GD+GV H DGY+E+KDRSKD+IISGG
Sbjct: 392 MGEVVFRGNTVMNGYLKNPEATKEAFK-GGWFWSGDLGVKHPDGYIELKDRSKDIIISGG 450
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRA 401
ENISS EVES L+ +P + E A+VA+ D++WG+ CAFV LK + E +I +CR
Sbjct: 451 ENISSIEVESTLFTHPCVLEAAVVARPDEYWGETACAFVKLK--DGSMASAEELISYCRD 508
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
RLPHYMA +S++ ED LPKT+TGK+QKFVLR A+
Sbjct: 509 RLPHYMAPRSIVFED-LPKTSTGKVQKFVLRTKAKALG 545
>gi|218192653|gb|EEC75080.1| hypothetical protein OsI_11221 [Oryza sativa Indica Group]
Length = 567
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/454 (46%), Positives = 288/454 (63%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT--ILPKPVLI------HDDV 56
RL+ V+ LL HS ++++ VD + LA +L + +P+LI D V
Sbjct: 103 RLNAPTVAFLLEHSSAEVVMVDQEFFSLAEDSLRIIAEQKKGAFKQPLLIVIGDQTCDPV 162
Query: 57 SATSSPT-----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
S S+ + G P F W P+ EW +AL YTSGTTS+PKGVV HRG ++
Sbjct: 163 SLKSALSKGAIEYEEFLETGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYL 222
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+++S + W + V+LWTLPMFH NGW Y+W +AA+ GT+ICLR+V I+S I +
Sbjct: 223 MSLSGALVWGMNEGAVYLWTLPMFHCNGWCYTWTLAALCGTSICLRQVTAKAIFSAIANQ 282
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH CGA VVLN + ++P PL R V ++T+GA+PP +VL LGF ++H+YG
Sbjct: 283 GVTHFCGAPVVLNTIVNAPPADAILPLPRVVNVMTAGAAPPPSVLASMSKLGFRITHTYG 342
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L D ERARL ARQG+R +GL +DVV P+T V DG +
Sbjct: 343 LSETYGPSTVCAWKPEWDELPDDERARLHARQGIRYVGLEGLDVVDPKTMAPVPADGSTL 402
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R +M GYLK+ ++ +N WF++GD+GV H+DGY+E+KDR+KD+IISGGE
Sbjct: 403 GEIVMRGNGVMKGYLKNPRANAEAF-ENGWFHSGDLGVKHTDGYIEVKDRAKDIIISGGE 461
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA----IIEF 398
NISS EVE +Y +PA+ E ++VA+ D+ WG+ PCAFV+ K + + E A I+ F
Sbjct: 462 NISSLEVEKAVYQHPAVLEASVVARADEQWGESPCAFVTPK-DGADSSDEAALAGDIMRF 520
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
CR RLP Y KSV+ LPKTATGKI+K LR
Sbjct: 521 CRERLPGYWVPKSVVF-GPLPKTATGKIKKHELR 553
>gi|215769242|dbj|BAH01471.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624776|gb|EEE58908.1| hypothetical protein OsJ_10547 [Oryza sativa Japonica Group]
Length = 567
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/454 (46%), Positives = 288/454 (63%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT--ILPKPVLI------HDDV 56
RL+ V+ LL HS ++++ VD + LA +L + +P+LI D V
Sbjct: 103 RLNAPTVAFLLEHSSAEVVMVDQEFFSLAEDSLRIIAEQKKGAFKQPLLIVIGDQTCDPV 162
Query: 57 SATSSPT-----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
S S+ + G P F W P+ EW +AL YTSGTTS+PKGVV HRG ++
Sbjct: 163 SLKSALSKGAIEYEEFLETGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYL 222
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+++S + W + V+LWTLPMFH NGW Y+W +AA+ GT+ICLR+V I+S I +
Sbjct: 223 MSLSGALVWGMNEGAVYLWTLPMFHCNGWCYTWTLAALCGTSICLRQVTAKAIFSAIANQ 282
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH CGA VVLN + ++P PL R V ++T+GA+PP +VL LGF ++H+YG
Sbjct: 283 GVTHFCGAPVVLNTIVNAPPADAILPLPRVVNVMTAGAAPPPSVLASMSKLGFRITHTYG 342
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L D ERARL ARQG+R +GL +DVV P+T V DG +
Sbjct: 343 LSETYGPSTVCAWKPEWDELPDDERARLHARQGIRYVGLEGLDVVDPKTMAPVPADGSTL 402
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R +M GYLK+ ++ +N WF++GD+GV H+DGY+E+KDR+KD+IISGGE
Sbjct: 403 GEIVMRGNGVMKGYLKNPRANAEAF-ENGWFHSGDLGVKHTDGYIEVKDRAKDIIISGGE 461
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA----IIEF 398
NISS EVE +Y +PA+ E ++VA+ D+ WG+ PCAFV+ K + + E A I+ F
Sbjct: 462 NISSLEVEKAVYQHPAVLEASVVARADEQWGESPCAFVTPK-DGADSSDEAALAGDIMRF 520
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
CR RLP Y KSV+ LPKTATGKI+K LR
Sbjct: 521 CRERLPGYWVPKSVVF-GPLPKTATGKIKKHELR 553
>gi|326505982|dbj|BAJ91230.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 659
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/454 (46%), Positives = 283/454 (62%), Gaps = 25/454 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF---PSNTILPKPVLIHDDV-SATS 60
R D VS LL HS +K+ V+ + AAL P+ +P V++ DD S
Sbjct: 201 RHDAAMVSALLKHSGAKVFLVESSLLDIGKAALKRLADQPNAASIPFLVIMSDDAGSGED 260
Query: 61 SPTVGHPNF-------------KWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
S ++ +W P +E DP+ LNYTSGTTS PKGVV+ HRG ++ T
Sbjct: 261 SGCAADYDYEGLIKNAPSKFDVRW--PANELDPITLNYTSGTTSRPKGVVYNHRGAYLNT 318
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+ +++ + I P +LWT+PMFH NGW WG+A GGTN+CLR +I+ I +GV
Sbjct: 319 IGTVLAYDITPMPTYLWTVPMFHCNGWHLPWGVAMQGGTNVCLRHFTAGVIFDSIARNGV 378
Query: 168 THICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
TH+ GA VLNM+ ++P+ + L V+++T GA PP VL E LGFVV H YGLTE
Sbjct: 379 THMGGAPTVLNMIVNAPAADRRLLPGTVRVMTGGAPPPPRVLAGMEELGFVVYHIYGLTE 438
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
T G C W +W+TL ERARLKARQG I + ++DV P T SV DG++ GE+
Sbjct: 439 THGPATVCTWMPEWDTLPAEERARLKARQGFHHIAMEEVDVKDPATMESVPRDGEAAGEV 498
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
+FR ++M GY +D + + M W +TGD+ V H DGY+++KDR+KD+IISGGENIS
Sbjct: 499 MFRGNTVMSGYYRDIDATKEAM-AGGWLHTGDLAVRHPDGYIQLKDRAKDIIISGGENIS 557
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPH 405
S EVESV++ +PA+ E A+VA+ D+ WG+ PCAFV LK + TE II FCR R+PH
Sbjct: 558 SIEVESVIFSHPAVLEAAVVARPDEHWGETPCAFVKLK--DGARATEAGIIGFCRERMPH 615
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
YMA K+V+ ED LPKT+TGK QKFVLRE A+
Sbjct: 616 YMAPKTVVFED-LPKTSTGKTQKFVLREKARAMG 648
>gi|115360767|ref|YP_777904.1| AMP-dependent synthetase/ligase [Burkholderia ambifaria AMMD]
gi|115286095|gb|ABI91570.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
Length = 550
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/442 (45%), Positives = 272/442 (61%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E KLL VD + +PL AL P P V+ +D A P +
Sbjct: 103 RLDADGIAFILRHGECKLLLVDRELAPLVAKALQSVPH----PPRVIDINDHEAPDGPAI 158
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F +P EW P+ALNYTSGTT PKGVV HR +++++ + +
Sbjct: 159 GETDYESLLASGDPEFAGRRPADEWTPIALNYTSGTTGDPKGVVPSHRSTYVMSLLQMTN 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P++LWTLPMFH NGW ++W + + GT++CLRKV+ I S I HGV H C A
Sbjct: 219 WPLPRAPIYLWTLPMFHANGWCFTWAITSAAGTHVCLRKVNAANILSAIAKHGVDHFCAA 278
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL ++S P + +PL R V++LT+G+ PAAVL ++GF V H YG+TE AG +
Sbjct: 279 PIVLAGIASVPPSELQPLPRRVRVLTAGSPAPAAVLEAVGAVGFDVDHVYGITEIAGTPI 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
SCAW +W+TL ++ ++KARQGVR +M V T V D S GE++ R +
Sbjct: 339 SCAWHDEWDTLPSDQQGKMKARQGVRAAAFENMSVADLATLEPVPADSTSCGEVLVRGNT 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M+GY K+ + ++ WF+TGD+ VVH DGY++I DRSKDVIISGGENISS EVE
Sbjct: 399 VMMGYFKNADATAKAFA-GGWFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEE 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
V+Y + A+VAQ D WG+ PCAF+ LK + S TE+ +I FCR RL H+ +
Sbjct: 458 VIYRMAGVLNAAVVAQPDDKWGETPCAFIELKPDASPI-TEQDVILFCRERLAHFKCPRR 516
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
VI ELPKTATGKIQKF LRE
Sbjct: 517 VIF-GELPKTATGKIQKFRLRE 537
>gi|380042374|gb|AFD33351.1| acyl-activating enzyme 7 [Cannabis sativa]
Length = 597
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 206/447 (46%), Positives = 285/447 (63%), Gaps = 15/447 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
R D VS LL HSE+KL+FV+ Q AL AL L I P +++ D + +S +
Sbjct: 149 RHDSAMVSTLLAHSEAKLIFVEPQLLETALGALDLLAQKDIKPPILVLLTDFESFTSSSY 208
Query: 65 ---------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
G +F+ +P+SEWDP+++NYTSGTT++PK VV+ HRG ++ ++++++
Sbjct: 209 HNYNNLLENGSYDFEVRRPKSEWDPISINYTSGTTAAPKAVVYTHRGAYLNSIATVLLHG 268
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+ +PV+LW++PMFH NGW WG AA G TNIC+RKV I+ I H VTH A
Sbjct: 269 MGTRPVYLWSVPMFHCNGWCLPWGAAAQGATNICIRKVFPKAIFDNIHLHKVTHFGAAPT 328
Query: 176 VLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
VLNM+ +SP PL V+I+T G+ PP V+ R E +GF V+H YGLTET G +
Sbjct: 329 VLNMIVNSPKDNIHLPLPHMVEIMTGGSPPPPQVMARMEEMGFRVNHIYGLTETYGPATN 388
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C K +W+ L ER LKARQG+ + + +MDV T SVK DG++ GE++FR ++
Sbjct: 389 CVCKPEWDALPPEERYALKARQGLNHLAMEEMDVKDSVTMESVKADGKTIGEVMFRGNTV 448
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GY KD + + + WF +GD+GV H DGY+++KDR KDV+ISGGEN+S EVE+V
Sbjct: 449 MSGYFKDLKATEEAF-EGGWFCSGDVGVKHEDGYIQLKDRKKDVVISGGENVSPVEVETV 507
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTE-EAIIEFCRARLPHYMAHKS 411
LY + + E A+VA+ DK WG+ PCAFV LK + II+FCR RLPHYMA K+
Sbjct: 508 LYSHEPVLEAAVVARPDKLWGETPCAFVPLKEGFDNNNVSVDHIIKFCRDRLPHYMAPKT 567
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
V+ ED LPKT+TGKIQK+ L+E A+
Sbjct: 568 VVFED-LPKTSTGKIQKYFLKEKARAM 593
>gi|351729965|ref|ZP_08947656.1| AMP-dependent synthetase and ligase [Acidovorax radicis N35]
Length = 566
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/444 (45%), Positives = 280/444 (63%), Gaps = 15/444 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA---LAALSLFP------SNTILPKPVLIHDD 55
RLD + ++ +L H E+ +L VD + + LA +A L P +L +P D
Sbjct: 111 RLDAEGIAFILQHGEAHILLVDSEFAALADKAVAGLDQPPLVVAVHDAGLLAQPAFGAMD 170
Query: 56 VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
A + G P F+ + PE EWDP+ALNYTSGTT PKGVV HRG +++++ + DW
Sbjct: 171 YEALLAE--GDPAFEGLWPEDEWDPIALNYTSGTTGDPKGVVPSHRGAYLMSLLQMTDWA 228
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+P +PV+LWTLPMFH NGW ++W + A GT++CLRKV I+ I HGV H C A
Sbjct: 229 MPRRPVYLWTLPMFHANGWCFTWAITAAAGTHVCLRKVTAKAIFEAIAEHGVDHFCAAPT 288
Query: 176 VLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
VL ML+++P + L RPV++LT+G+ PPAA+L ++GF V H YG+TE +G VSC
Sbjct: 289 VLAMLANAPEHERIALPRPVRVLTAGSPPPAAILQAIAAMGFDVDHVYGITEVSGTPVSC 348
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
+ W L + RA+L+ARQGV L M V++P+T V DG + GEI+ R ++M
Sbjct: 349 VRQPGWAALPEAGRAQLQARQGVHAAALEHMRVLNPDTLEPVPADGVTAGEIMLRGNTVM 408
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GYLK+ G++ WF+TGDI V+H DGY++I DRSKDVIISGGENISS EVE VL
Sbjct: 409 KGYLKN-PGATAKAFAGGWFHTGDIAVLHPDGYVQITDRSKDVIISGGENISSVEVEDVL 467
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
+ +PA+ A+VAQ D+ WG+ PCAFV LK + + + +I CR L + + ++
Sbjct: 468 HRHPAVLLAAVVAQPDERWGEVPCAFVELKPDAVGTVSADELIALCREDLARFKCPRQIV 527
Query: 414 IEDELPKTATGKIQKFVLREIVNA 437
E LPKTATGKIQKF LREI +
Sbjct: 528 FE-VLPKTATGKIQKFRLREIAGS 550
>gi|326528703|dbj|BAJ97373.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 496
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 215/461 (46%), Positives = 292/461 (63%), Gaps = 30/461 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-PSNTILPKPVLIH------DDVS 57
RLD SVLL HSE++++FVD +A AL L + P VLI DD S
Sbjct: 33 RLDAAMASVLLRHSEARVVFVDAALLGVAREALRLLSEAGAAAPVVVLIRELLDGCDDGS 92
Query: 58 AT-SSPTVG-------------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGL 103
A+ S T G P F P E +P+ALNYTSGTTS PKGV++ HRG
Sbjct: 93 ASLVSGTTGAEHEYEALVGAGGSPEFAVRWPADENEPIALNYTSGTTSRPKGVIYTHRGA 152
Query: 104 FIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
++ +++S++ + + PV+LW++PMFH NGW +WG+AA GGTN+CLRKV ++ +
Sbjct: 153 YLNSLASVLLNDMASMPVYLWSVPMFHCNGWCMTWGVAAQGGTNVCLRKVTGAAVFDAVA 212
Query: 164 HHGVTHICGALVVLNML-SSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSH 219
HGVTH+ GA VL M+ ++P + P R V ++T GA PP AVL R E LGF+V H
Sbjct: 213 RHGVTHMGGAPTVLGMIVHAAPEERRPLPPGRKVAVMTGGAPPPPAVLFRMEELGFLVIH 272
Query: 220 SYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDG 279
SYGLTET G CAWK +W+ L ERA +KARQG+ +GL ++DV P T SV DG
Sbjct: 273 SYGLTETYGPATVCAWKPEWDALPADERAAIKARQGLHHLGL-EVDVKDPATMRSVPADG 331
Query: 280 QSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGV-VHSDGYLEIKDRSKDVII 338
+ GE++FR ++M GY KD ++ WF +GD+ V V DGY++++DRSKD+II
Sbjct: 332 ATMGEVMFRGNTVMSGYYKDAA-ATAEALAGGWFRSGDLAVRVPGDGYVKVRDRSKDIII 390
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENIS+ EVE+ L+ +PA+ E A+V + D+ WG+ PCAFV +K +P E ++ F
Sbjct: 391 SGGENISTIEVEAALFAHPAVAEAAVVGRPDEHWGETPCAFVVVKNGERVEPEE--VVAF 448
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
CR RLP YMA ++V+I +ELPKTATGK+QKF LRE A+
Sbjct: 449 CRGRLPRYMAPRTVVIVEELPKTATGKVQKFALREKAKAMG 489
>gi|108707722|gb|ABF95517.1| AMP-binding enzyme family protein, expressed [Oryza sativa Japonica
Group]
Length = 587
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/454 (46%), Positives = 288/454 (63%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT--ILPKPVLI------HDDV 56
RL+ V+ LL HS ++++ VD + LA +L + +P+LI D V
Sbjct: 123 RLNAPTVAFLLEHSSAEVVMVDQEFFSLAEDSLRIIAEQKKGAFKQPLLIVIGDQTCDPV 182
Query: 57 SATSSPT-----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
S S+ + G P F W P+ EW +AL YTSGTTS+PKGVV HRG ++
Sbjct: 183 SLKSALSKGAIEYEEFLETGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYL 242
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+++S + W + V+LWTLPMFH NGW Y+W +AA+ GT+ICLR+V I+S I +
Sbjct: 243 MSLSGALVWGMNEGAVYLWTLPMFHCNGWCYTWTLAALCGTSICLRQVTAKAIFSAIANQ 302
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH CGA VVLN + ++P PL R V ++T+GA+PP +VL LGF ++H+YG
Sbjct: 303 GVTHFCGAPVVLNTIVNAPPADAILPLPRVVNVMTAGAAPPPSVLASMSKLGFRITHTYG 362
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L D ERARL ARQG+R +GL +DVV P+T V DG +
Sbjct: 363 LSETYGPSTVCAWKPEWDELPDDERARLHARQGIRYVGLEGLDVVDPKTMAPVPADGSTL 422
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R +M GYLK+ ++ +N WF++GD+GV H+DGY+E+KDR+KD+IISGGE
Sbjct: 423 GEIVMRGNGVMKGYLKNPRANAEAF-ENGWFHSGDLGVKHTDGYIEVKDRAKDIIISGGE 481
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA----IIEF 398
NISS EVE +Y +PA+ E ++VA+ D+ WG+ PCAFV+ K + + E A I+ F
Sbjct: 482 NISSLEVEKAVYQHPAVLEASVVARADEQWGESPCAFVTPK-DGADSSDEAALAGDIMRF 540
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
CR RLP Y KSV+ LPKTATGKI+K LR
Sbjct: 541 CRERLPGYWVPKSVVF-GPLPKTATGKIKKHELR 573
>gi|380042372|gb|AFD33350.1| acyl-activating enzyme 6 [Cannabis sativa]
Length = 569
Score = 396 bits (1018), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/453 (47%), Positives = 286/453 (63%), Gaps = 27/453 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP----SNTILPKPVLIHDD----- 55
RL+ + LL HS + + VD + PLA AL + S+ P V+I D+
Sbjct: 105 RLNASTIGFLLGHSLAAAVIVDQEFFPLAEEALKILAEERKSHYKPPLLVVIGDESCDPK 164
Query: 56 ----------VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
+ G P F W PE EW +AL YTSGTT+SPKGVV HRG ++
Sbjct: 165 NLEYALKRGAIEYEKFLEGGDPEFSWEPPEDEWQSIALGYTSGTTASPKGVVLSHRGSYL 224
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+++S+ + W + ++LWTLPMFH NGW Y+WGMAA+ GTNICLR+V +YS I +
Sbjct: 225 MSLSAAVVWGMNEGAIYLWTLPMFHCNGWCYTWGMAAMCGTNICLRQVTAKGVYSAIAEY 284
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH C A VVLN + ++P+ PL V ++T+GA+PP +VL GF V+H+YG
Sbjct: 285 GVTHFCAAPVVLNTIVNAPAEDAILPLPHLVHVMTAGAAPPPSVLFAMSEKGFKVAHTYG 344
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W++L ++ARL ARQGVR I L +DVV +T SV DG +
Sbjct: 345 LSETYGPSTICAWKPEWDSLPPIKQARLNARQGVRYIALEGLDVVDTKTMKSVPADGTTM 404
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + + N WF++GD+ V H DGY+EIKDRSKD+IISGGE
Sbjct: 405 GEIVMRGNAVMKGYLKNPKANKESFA-NGWFHSGDLAVKHPDGYIEIKDRSKDIIISGGE 463
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWEL---SKKPTEEAIIEFC 399
NISS EVE+ LY+ PA+ EV +VA+ D+ WG+ PCAFV+LK + +++ E II+FC
Sbjct: 464 NISSLEVENPLYLPPAVLEVFVVARPDERWGESPCAFVTLKPNIDNSNEQGLAEDIIKFC 523
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
R++ P Y KSV+ LPKTATGKIQK VLR
Sbjct: 524 RSKKPAYWVPKSVVF-GPLPKTATGKIQKHVLR 555
>gi|254282584|ref|ZP_04957552.1| AMP-binding protein [gamma proteobacterium NOR51-B]
gi|219678787|gb|EED35136.1| AMP-binding protein [gamma proteobacterium NOR51-B]
Length = 544
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/447 (46%), Positives = 286/447 (63%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + VS +L H E+K + VD + S + ALS KP++I DD
Sbjct: 105 RLDAETVSFILKHGEAKAVLVDREFSEVVQRALSGLDQ-----KPLVIDIDDPFFEGGEL 159
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G PNF W PE EW+ + LNYTSGTT PKGVV+ HRG ++ +S+L+
Sbjct: 160 IGEKDYEALLSEGDPNFAWQMPEDEWEAITLNYTSGTTGDPKGVVYHHRGAYLNAISNLV 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + + PV+LWTLPMFH NGW + W +AA GT++CLR V I+ I+ V H C
Sbjct: 220 CWDMGHHPVYLWTLPMFHCNGWCFPWTLAASAGTSVCLRHVRSDHIFDAIRRERVDHFCA 279
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN+L+++ S +D VK++T+GA+PPA+V+ E +GF V+H YGLTET G
Sbjct: 280 APIVLNLLNNAVSDMKSGIDHEVKVMTAGAAPPASVIAGMEQMGFQVTHVYGLTETYGPS 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V CAW+ W+ + E+ARLK+RQGVR + VV PET V DG++ GE+V R
Sbjct: 340 VVCAWQDNWDEKSAAEKARLKSRQGVRAPMQEGLMVVDPETLEPVPRDGETLGEVVMRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + ++ WF++GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 400 LVMKGYLKNPDTTAKSF-SGGWFHSGDLAVWHPDGYIEIKDRSKDIIISGGENISSIEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VL+ +P++ E A+VA +D WG+ PCAF++LK + ++ TE+ II+FCR +L + K
Sbjct: 459 DVLFRHPSVLEAAVVAMQDGKWGEVPCAFITLKSD-KEEVTEQNIIDFCRDKLASFKMPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
VI D LPKT+TGKIQK+VLR++ N
Sbjct: 518 KVIFTD-LPKTSTGKIQKYVLRQLANG 543
>gi|407788516|ref|ZP_11135644.1| acyl-CoA synthetase [Celeribacter baekdonensis B30]
gi|407197286|gb|EKE67355.1| acyl-CoA synthetase [Celeribacter baekdonensis B30]
Length = 553
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/447 (45%), Positives = 284/447 (63%), Gaps = 21/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L+H+E+K++ VD + S + AL + + + V+ +D S +
Sbjct: 105 RLDAEAIAFILNHAEAKVVIVDPEFSEVMERALHMAGGDIL----VIDIEDSSFEGGKKI 160
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G N W P SEWD ++LNYTSGTT +PKGVV+ HRG ++ +S++
Sbjct: 161 GALTYDAFLAEGDENDDWSLPGSEWDAISLNYTSGTTGNPKGVVYHHRGAYLNALSNINT 220
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P +LWTLPMFH NGW + W +AA GT++CLR V +Y +IK VTH CGA
Sbjct: 221 WDMPRHFTYLWTLPMFHCNGWCFPWSVAAHAGTSVCLRAVRDSTVYELIKSQKVTHFCGA 280
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL +L ++P ++ VK+LT GA PPA V+ + ES GF V+H YGLTET G V
Sbjct: 281 AIVLGLLGNAPDEMKAGIEHEVKVLTGGAPPPAIVIEKMESAGFDVTHGYGLTETYGASV 340
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C+W S+W+ L +ERAR+KARQGV+ + L D+ V P+T + V DG++ GE+ R +
Sbjct: 341 FCSWHSEWDALPLSERARIKARQGVKNMALDDLMVAEPDTMVPVPSDGETVGEVFVRGNN 400
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + R WF +GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 401 VMKGYLKNISATDAAFR-GGWFASGDLAVRHPDGYIEIKDRSKDIIISGGENISSIEVED 459
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P++ A+VA+ D+ WG+ PCAF+ LK TE IIEFCRA + + A K+
Sbjct: 460 VLYKHPSVMLAAVVAKPDEKWGETPCAFIELK--AGATTTEAEIIEFCRANMARFKAVKT 517
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
V+ LPKT+TGKIQKFVLR+ A+
Sbjct: 518 VVFA-TLPKTSTGKIQKFVLRDQARAM 543
>gi|71281260|ref|YP_270909.1| AMP-binding protein [Colwellia psychrerythraea 34H]
gi|71147000|gb|AAZ27473.1| AMP-binding protein [Colwellia psychrerythraea 34H]
Length = 541
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/446 (45%), Positives = 293/446 (65%), Gaps = 23/446 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ +L H+E+K+L D + SP+ AL + P KP++I DD +
Sbjct: 104 RLDAEAIAFILVHAETKVLITDKEFSPIVKKALRMIPH-----KPLVIDIDDPNFNEGQL 158
Query: 64 VG-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G +F+ ++P++EWD ++LNYTSGTT PKGVV+ +RG ++ VS+++
Sbjct: 159 IGSLTYDQLLEEGDSDFESIRPKNEWDAISLNYTSGTTGDPKGVVYHYRGAYLNAVSNVM 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV+LWTLPMFH NGW + W +AA GT++ LR V I+++I+ V + CG
Sbjct: 219 SWSMGEHPVYLWTLPMFHCNGWCFPWSIAATAGTSVSLRHVRAEPIFNLIRSEKVGYFCG 278
Query: 173 ALVVLNMLS-SSPSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML+ + PS K ++ PVK++T+GA PPA+V+ E+ GF V+H+YGLTET G
Sbjct: 279 APIVLNMLNGAEPSLKADINHPVKVMTAGAPPPASVIEGMEASGFKVTHTYGLTETYGPS 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V CAW +WN + ++A+LK+RQGVR+ L + V PET + DG+S GEI R
Sbjct: 339 VVCAWHDEWNEESPEKQAKLKSRQGVRSPMLDQLMVADPETLEPMPKDGESVGEIFMRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + D W ++GDI V HSDGY+EIKDRSKDVIISGGENISS EVE
Sbjct: 399 LVMKGYLKNPSTTQAAF-DGGWLHSGDIAVWHSDGYIEIKDRSKDVIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +P + EVA+VA++D WG+ PCAF++ + + TE+ +I FCR + H+ A K
Sbjct: 458 DILYRHPKVQEVAVVAKKDDKWGETPCAFITPMPNV--EITEQEMISFCRDNMAHFKAPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVN 436
++I ELPKT+TGKIQKFVLR+ N
Sbjct: 516 TIIF-GELPKTSTGKIQKFVLRQQAN 540
>gi|399154433|ref|ZP_10754500.1| acyl-CoA synthetase [gamma proteobacterium SCGC AAA007-O20]
Length = 537
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 290/446 (65%), Gaps = 23/446 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L+ S +K+L VD + +A ALS+ SN PK VLI +DV A S P V
Sbjct: 94 RLDAGTIAHILNDSNAKILLVDRELFEVASDALSISSSN---PKVVLI-NDVFAESKPNV 149
Query: 65 -------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P+FKW +P+ EW P++LNYTSGTT PKGVV+ HRG +++++ ++
Sbjct: 150 TENTIEYESLVENGDPSFKWQKPDDEWQPLSLNYTSGTTGQPKGVVYHHRGSYLMSMGTV 209
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I W +PN PV+L+++PMFH NGW ++W MAAV GT ICLR ++ ++ H VTH
Sbjct: 210 IGWELPNHPVYLYSVPMFHCNGWGHAWTMAAVAGTVICLRAFSPEKVFDLLDRHKVTHFG 269
Query: 172 GALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA ++LNML+++P K DR +K++T+GA PPA VL SLGF V H YGLTET G
Sbjct: 270 GAPIMLNMLANAPKKIQKTFDREIKVMTAGAPPPAKVLESMMSLGFNVMHVYGLTETYGH 329
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
++ A ++ W + A+L +RQGVR D+ V+ ETG V DG++ GEIV R
Sbjct: 330 ILQAAPQTSWLSETPAGLAKLSSRQGVRFPMTEDVSVLDQETGEHVPPDGKTIGEIVIRC 389
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+ M+GYL + + + D DWF++GD+ V+H+DGY++IKDRSKD+IISGGENISS EV
Sbjct: 390 NTCMMGYLNNPQATKEVFAD-DWFHSGDLAVIHNDGYIQIKDRSKDIIISGGENISSVEV 448
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E+VLY +P++ E A+VA D+ WG+ PCAFV LK + + +E +I+FC+ + +
Sbjct: 449 ENVLYQHPSVGEAAVVAMPDETWGEVPCAFVELKSD--QLVSENELIDFCKQNMATFKRP 506
Query: 410 KSVIIEDELPKTATGKIQKFVLREIV 435
K V+ LPKTATGKIQK LR V
Sbjct: 507 KKVVF-GPLPKTATGKIQKHELRASV 531
>gi|346991512|ref|ZP_08859584.1| acyl-CoA synthetase [Ruegeria sp. TW15]
Length = 542
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/440 (45%), Positives = 277/440 (62%), Gaps = 18/440 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--------- 55
RLD ++ +L+H+E+K+L VD + S + AL + ++ + I DD
Sbjct: 104 RLDAPIIAFILNHAEAKVLLVDPEFSGVVKLALEQVDHDLLV---IDIEDDSFDGGERLG 160
Query: 56 -VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
++ S G P F+W P EWD + LNYTSGTT +PKGVV+ HRG + S+++ W
Sbjct: 161 DLTYESLLAEGDPEFEWSLPADEWDAITLNYTSGTTGNPKGVVYHHRGAALNATSNILTW 220
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P V+LWTLPMFH NGW + W MAA GT++CLR V IY + GVTH CGA
Sbjct: 221 GMPQHSVYLWTLPMFHCNGWCFPWTMAANAGTSVCLRAVRDEPIYRAFREEGVTHFCGAP 280
Query: 175 VVLNMLSSSPS-TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
+VLNML+++P + + +K +T+GA PPA V+ E +G V+H YGLTET G V C
Sbjct: 281 IVLNMLANAPDHLRDFTQQIKAMTAGAPPPAKVIEAMEGMGVEVTHVYGLTETYGPSVVC 340
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
AWK +WN +RA LK RQGV+ + L+ + V PET V DG++ GEI + +M
Sbjct: 341 AWKDEWNEKGAEDRAALKVRQGVKYVALSGLMVADPETMEPVPSDGETMGEIFMQGNIVM 400
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GYLK+ E + + WF +GD+GV+H DGY+ +KDRSKD+IISGGENISS EVE L
Sbjct: 401 KGYLKNAEATDKAFK-GGWFASGDLGVMHPDGYIALKDRSKDIIISGGENISSVEVEDTL 459
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +PA+ E A+VA+ D+ WG+ PCAFV LK + + E II FCR + H+ A K+V+
Sbjct: 460 YKHPAVMEAAVVARPDEKWGETPCAFVELKPQ--AEANEAEIIAFCRDHMAHFKAPKTVV 517
Query: 414 IEDELPKTATGKIQKFVLRE 433
LPKT+TGKIQKF+LR+
Sbjct: 518 F-GALPKTSTGKIQKFILRD 536
>gi|255539206|ref|XP_002510668.1| AMP dependent ligase, putative [Ricinus communis]
gi|223551369|gb|EEF52855.1| AMP dependent ligase, putative [Ricinus communis]
Length = 551
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/447 (45%), Positives = 293/447 (65%), Gaps = 18/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS-NTILPKPVLIHDDVSATSSPT 63
R D VSVLL HSE+K++FVD+Q +A AL + T LP VL+ + T +
Sbjct: 97 RHDSAMVSVLLRHSEAKVIFVDHQFLQIAQGALEILSKLGTKLPMFVLVQECGQPTPISS 156
Query: 64 VGHPNFKWV-----------QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
GH F+ + +P E DP++LNYTSGTTSSPKGV++ HRG ++ ++++++
Sbjct: 157 SGHLEFESLLAMGKLDFEVRRPNDECDPISLNYTSGTTSSPKGVIYSHRGAYLNSLAAVL 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ + P++LW +PMFH NGW +WG+AA GGT++CLR V I+ I + VTH+ G
Sbjct: 217 LNDMVSMPIYLWCVPMFHCNGWCLTWGVAAQGGTHVCLRSVSPKGIFENIARYKVTHMGG 276
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VLNM+ ++P++ KPL V ++T A PP VL E LGF V+HSYGLTET G
Sbjct: 277 APTVLNMIINAPASDQKPLPGKVAVMTGAAPPPPRVLFAMEELGFNVTHSYGLTETYGPG 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C WK +W +L +A++KARQG++ +G+ ++D+ P T SV D ++ GE++FR
Sbjct: 337 TVCTWKPEWTSLPRDVQAKIKARQGLQHLGIEEVDIKDPVTMKSVPPDAKTIGEVMFRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + + WF +GD+GV H DGY+E+KDRSKD+IISGGENIS+ EVE
Sbjct: 397 TVMNGYLKNLRATEEAFK-GGWFRSGDLGVKHPDGYIELKDRSKDIIISGGENISTIEVE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SVL+ +PA+ E A+V D WG+ PCAFV LK + E +I++CR LPHYMA +
Sbjct: 456 SVLFSHPAVLEAAVVGSPDDHWGETPCAFVKLKDGCNASAQE--LIKYCRDHLPHYMAPR 513
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
+V+ ED LPKT+TGK+QK+VLR+ +A
Sbjct: 514 TVLFED-LPKTSTGKVQKYVLRKKASA 539
>gi|372270730|ref|ZP_09506778.1| AMP-binding protein [Marinobacterium stanieri S30]
Length = 545
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/446 (45%), Positives = 282/446 (63%), Gaps = 21/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K++ VD + S A+ + N I V+ DD S +
Sbjct: 106 RLDAEAIAFILQHGEAKVVIVDREFSETIARAIKIARINPI----VIDIDDPSFEGGELI 161
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P+++W P EWD + LNYTSGTT PKGVV+ HRG ++ VS+++
Sbjct: 162 GEMDYEAFISAGDPDYEWQLPADEWDAITLNYTSGTTGDPKGVVYHHRGAYLNAVSNVLS 221
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + + PV+LWTLPMFH NGW + W +AA G ++CLR V IY++I+ V CGA
Sbjct: 222 WNMGDAPVYLWTLPMFHCNGWCFPWSIAAAAGVSVCLRHVRADDIYNLIRDEKVNFFCGA 281
Query: 174 LVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLNML+++ ++ V ++T+GA+PPA+V+ E++GF V+H YGLTET G V
Sbjct: 282 PIVLNMLNNADDELKAGIEHQVNVMTAGAAPPASVIEGMENMGFNVTHVYGLTETYGPCV 341
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +WN TE+ARLK+RQGV+ L D+ V +P+T V DG++ GEI R
Sbjct: 342 VCAWHEEWNDSTPTEKARLKSRQGVKAPMLEDLMVANPDTMEPVAKDGETIGEIFMRGNL 401
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + WF++GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 402 VMKGYLKNPTTTDKSFA-GGWFHSGDLAVWHEDGYIEIKDRSKDIIISGGENISSIEVED 460
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P + E A+VAQ+D+ WG+ PCAFV+LK +E+ II+FCR + + A K
Sbjct: 461 VLYRHPQVMEAAVVAQQDEKWGEVPCAFVTLK--AGADVSEQDIIQFCRDSMARFKAPKR 518
Query: 412 VIIEDELPKTATGKIQKFVLREIVNA 437
V+ D LPKT+TGKIQKFVLR NA
Sbjct: 519 VVFCD-LPKTSTGKIQKFVLRSQANA 543
>gi|392381899|ref|YP_005031096.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
gi|356876864|emb|CCC97653.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
Length = 551
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 283/449 (63%), Gaps = 21/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ +L H E+K+L D + S + A+ + +P++I DD A
Sbjct: 106 RLDAEALAFILEHGEAKVLLTDREFSGVISKAVHMLEPKR---RPIVIDIDDPQAKGGEL 162
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P ++W P EW +ALNYTSGTT +PKGVV+ HRG ++ + +++
Sbjct: 163 IGEQTYEQFLETGDPAYEWPMPADEWQAIALNYTSGTTGNPKGVVYHHRGAYLNAMGNVL 222
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P+ PV+LWTLPMFH NGW + W + A+ GTN+C+R + IY + GVTH+CG
Sbjct: 223 TWAMPHHPVYLWTLPMFHCNGWCFPWTVTAMAGTNVCVRTITAKGIYDALADLGVTHMCG 282
Query: 173 ALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +++ ++ ++P + + R VK++T+GA+PPAAV+ + E +GF V+H YGLTE G V
Sbjct: 283 APIIMGLIVNAPEDQKREIPRGVKMMTAGAAPPAAVIEKIERMGFDVTHVYGLTEVYGPV 342
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAW WN L ERA LKARQGV L + V P T + DG + GEI R
Sbjct: 343 TICAWHEHWNDLPLEERAALKARQGVNYATLEGLMVADPNTLQPTRKDGVTMGEIFMRGN 402
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + WF+TGD+GV H+DGY+E+KDRSKD+IISGGENIS+ EVE
Sbjct: 403 TVMKGYLKNPRATQEAF-SGGWFHTGDLGVWHADGYIELKDRSKDIIISGGENISTIEVE 461
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SVLY +P I E A+VA+ D+ WG+ PCAFV++K K+ TE +I +CR L H+ +
Sbjct: 462 SVLYKHPDIVEAAVVARPDEKWGETPCAFVTVK--EGKQLTEAEVIAYCREHLAHFKCPR 519
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
+V+ LPKT+TGKIQK+VLR+ A+N
Sbjct: 520 TVVF-TALPKTSTGKIQKYVLRDQARALN 547
>gi|386829256|ref|ZP_10116363.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Beggiatoa
alba B18LD]
gi|386430140|gb|EIJ43968.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Beggiatoa
alba B18LD]
Length = 542
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/446 (46%), Positives = 292/446 (65%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + ++ +L H E+K+L D + SP+ AL I+ + I D+++ + S
Sbjct: 103 RLDPEMIAFMLQHGEAKILITDKEFSPIISRALHFLEKPPII---IDIDDEMAKSGSLLG 159
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
T G PNF+W P+ EW + LNYTSGTT +PKGVV+ HRG ++ +VS++I W
Sbjct: 160 EKDYESLLTEGDPNFQWQLPKDEWQAITLNYTSGTTGNPKGVVYHHRGAYLNSVSNIISW 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P V+LWTLPMFH NGW + W MAAV GTN+CLR+++ +IY ++ + VTH CGA
Sbjct: 220 ELPKHAVYLWTLPMFHCNGWCFPWTMAAVAGTNVCLRRIEADLIYDLVANEQVTHYCGAP 279
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+V NML ++P + VK + + A+PPAAVL E GF ++H YGLTET G V
Sbjct: 280 IVHNMLLNAPRAVREKKHHLVKGMIAAAAPPAAVLEGMEKNGFKITHVYGLTETYGPSVV 339
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C W ++W++L +RARL ARQGVR+ L + V P T V DG++ GEI R ++
Sbjct: 340 CEWHNEWDSLPIEDRARLNARQGVRSHVLEGLMVADPTTLEPVPSDGKTLGEIFMRGNNV 399
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M+GYLK+ + + WF++GD+GV+H DGY+EIKDRSKD+IISGGENIS+ EVE V
Sbjct: 400 MMGYLKNPKATDEAF-SGGWFHSGDLGVMHPDGYIEIKDRSKDIIISGGENISTIEVEDV 458
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PAI E A+VA+ D+ WG+ PCAF++L+ E + T + IIEFCR+++ HY + V
Sbjct: 459 LYRHPAILEAAVVAKPDEKWGETPCAFITLR-EDAGTVTAQEIIEFCRSQMAHYKIPRHV 517
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ +LPKT+TGKIQKF+LR+ V
Sbjct: 518 VF-GQLPKTSTGKIQKFILRDKAKVV 542
>gi|346990424|gb|AEO52693.1| cinnamic acid:CoA ligase [Petunia x hybrida]
Length = 570
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 209/465 (44%), Positives = 286/465 (61%), Gaps = 43/465 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI----------LPKPVLIHD 54
RLD ++++L HSE+KLLFVDY+ A AL L S +P+ +LI D
Sbjct: 97 RLDPMNIAIILKHSEAKLLFVDYEYLEKARKALELLMSTNFITAQNSKKISMPQVILIDD 156
Query: 55 DVSATSSPTV-----------GHPNFKWVQPES----EWDPMALNYTSGTTSSPKGVVHC 99
S T G+P + PE+ EWDP+ LNYTSGTTS PKGVV+
Sbjct: 157 LYSPTRIQQQDQLEYEQLVHQGNPEYA---PENIVDDEWDPIVLNYTSGTTSEPKGVVYS 213
Query: 100 HRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIY 159
HRG F+ T+++++ W + +PV+LW+LPMFH NGW+ +WG+AA GGTN+C+R IY
Sbjct: 214 HRGAFLSTLNTIMGWEMGTEPVYLWSLPMFHINGWTLTWGIAARGGTNVCIRNTTAQEIY 273
Query: 160 SVIKHHGVTHICGALVVLNMLSSSPSTKPLDR-----PVKILTSGASPPAAVLLRTESLG 214
S I H VTH+C A V N+L + KP +R PV+++ GA PP ++ + E LG
Sbjct: 274 SNITLHKVTHMCCAPTVFNILLEA---KPHERREITTPVQVMVGGAPPPTTLIGKIEELG 330
Query: 215 FVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMS 274
F V H YG+TE G + C W+S+WN L+ ++A LKARQG+ + L D+DV + +T S
Sbjct: 331 FHVVHCYGITEAGGTTLVCEWQSEWNKLSREDQANLKARQGISVLALEDVDVKNSKTMQS 390
Query: 275 VKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSK 334
V H+G++ GEI R SIM GY K+ + +S + N WF TGD+ V+H DGYLEIKDR K
Sbjct: 391 VPHNGKTMGEICLRGSSIMKGYFKNDKANSQVFK-NGWFLTGDVAVIHQDGYLEIKDRCK 449
Query: 335 DVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TE 392
D+IISGGENISS EVE+ + +P++ E A+VA WG+ PCAFV +K +K P E
Sbjct: 450 DIIISGGENISSIEVENAILKHPSVIEAAVVAMPHPRWGETPCAFV-IK---TKNPEIKE 505
Query: 393 EAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
II C+ LP +M K V +ELPKT TGK++K LRE+ +
Sbjct: 506 ADIIVHCKKELPGFMVPKHVQFLEELPKTGTGKVKKLQLREMAKS 550
>gi|91786587|ref|YP_547539.1| AMP-dependent synthetase and ligase [Polaromonas sp. JS666]
gi|91695812|gb|ABE42641.1| AMP-dependent synthetase and ligase [Polaromonas sp. JS666]
Length = 550
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/448 (46%), Positives = 284/448 (63%), Gaps = 20/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E KLL VD + SPL + AL SN P V+ +D+ A + +
Sbjct: 103 RLDADGIAFILRHGECKLLLVDREFSPLVVKALQGV-SN---PPRVIDINDLEAPAGAAI 158
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F P EW P+ALNYTSGTT PKGVV HRG +++++ + D
Sbjct: 159 GETDYESFLAGGDPAFPGRWPTDEWTPIALNYTSGTTGDPKGVVPSHRGTYLMSLLQMTD 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P PV+LWTLPMFH NGW ++W + A GT++CLRKV +++ I HGV H C A
Sbjct: 219 WALPRAPVYLWTLPMFHANGWCFTWAITAAAGTHVCLRKVTAANVFTAISDHGVDHFCAA 278
Query: 174 LVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V+ ++S+P + PL R V++LT+G+ PPAAVL ++GF V H +G+TE +G V
Sbjct: 279 PIVMAGIASTPEAERRPLPRRVRVLTAGSPPPAAVLEAVRAMGFDVDHVFGITEISGTPV 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
SCAW+++W+ L ++ RL+ARQGVR L ++ V P+T V DG + GEI+ R +
Sbjct: 339 SCAWQTEWDELPADQQGRLQARQGVRAAALENLRVADPDTLEPVPRDGVATGEILIRGNT 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M+GYLK+ G++ WF+TGD+ VVH DGY++I DRSKD+IISGGENISS EVE
Sbjct: 399 VMMGYLKN-PGATAKAFAGGWFHTGDVAVVHPDGYMQITDRSKDIIISGGENISSVEVEE 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY + A+VAQ D WG+ PCAFV LK + + TE +I FCR RL H+ +
Sbjct: 458 VLYRLAGVLNAAVVAQPDDKWGEVPCAFVELKPD-APLLTEVDVISFCRDRLAHFKCPRR 516
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAVN 439
V+ ELPKTATGKIQKF LRE+ + N
Sbjct: 517 VVFA-ELPKTATGKIQKFRLRELAGSRN 543
>gi|226508458|ref|NP_001147584.1| LOC100281193 [Zea mays]
gi|195612332|gb|ACG27996.1| AMP binding protein [Zea mays]
gi|413935298|gb|AFW69849.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 586
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 213/470 (45%), Positives = 293/470 (62%), Gaps = 37/470 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN----TILPKPVLIHDDV---- 56
RLD SVLL HSE+K++FVD +A AL L + +P VLI++ +
Sbjct: 102 RLDAGMASVLLQHSEAKVVFVDAALLGVAREALRLISQQAGGASRVPAVVLINEALDEPP 161
Query: 57 -SAT-------------------SSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGV 96
+AT SS G P F P+ E +P+ALNYTSGTTS PKGV
Sbjct: 162 SAATGNDKIPGVDRCYEYEALLLSSSRGGDPEFLIRWPDDENEPIALNYTSGTTSRPKGV 221
Query: 97 VHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVP 156
V+ HRG ++ ++SS++ + PV+LWT+PMFH NGW WG+AA GGTN+CLRKV+
Sbjct: 222 VYTHRGAYLNSLSSVLLNDMTALPVYLWTVPMFHCNGWCLVWGVAAQGGTNVCLRKVNSG 281
Query: 157 IIYSVIKHHGVTHICGALVVLNML--SSSPSTKPL----DRPVKILTSGASPPAAVLLRT 210
I++ + HGVTH+ GA VL+M+ +++ PL RPV ++T GA P VL R
Sbjct: 282 AIFAAVAAHGVTHMGGAPTVLSMVVNATAEERAPLGAGRKRPVTVMTGGAPPAPQVLFRM 341
Query: 211 ESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE 270
E LGF+V HSYGLTET G C W+ +W+ L ERA +KARQG+ +GL ++DV P
Sbjct: 342 EELGFLVIHSYGLTETYGPATVCTWRPEWDALPAAERAAIKARQGLHHLGL-EVDVKDPA 400
Query: 271 TGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHS-DGYLEI 329
T SV DG++ GE++FR ++M GY KD ++ W +GD+ V H+ DGY+ I
Sbjct: 401 TMASVPADGRTMGEVMFRGNTVMGGYYKDAA-ATAEAMAGGWLRSGDLAVRHAGDGYVRI 459
Query: 330 KDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKK 389
DRSKD+IISGGENIS+ EVE+ L+ +PA+ E A+V + D++WG+ PCAFV+L+ +
Sbjct: 460 LDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLREGAAGS 519
Query: 390 PTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
E ++ FC+ARLP YMA ++V+ ELPKTATGK+QKF LRE A+
Sbjct: 520 VRAEEVVAFCQARLPRYMAPRTVVFVAELPKTATGKVQKFALREQARAMG 569
>gi|357112581|ref|XP_003558087.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 567
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/453 (45%), Positives = 287/453 (63%), Gaps = 27/453 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI----LPKPVLIHD---DVS 57
RL+ V+ LL HS ++++ VD + LA +L + P V+I D D S
Sbjct: 103 RLNAPTVAFLLEHSSAEVVMVDQEFFSLAEDSLRIIADQKKGSFKQPLLVVIGDHTCDPS 162
Query: 58 ATSSP------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
A + G P F W P+ EW +AL YTSGTTS+PKGVV HRG ++
Sbjct: 163 ALQNALRKGAIEYEKFLETGDPEFAWKPPQDEWKSIALGYTSGTTSNPKGVVLHHRGAYL 222
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+++S ++ W + V+LWTLPMFH NGW Y+W +AA+ GTNICLR+V I+S I
Sbjct: 223 MSLSGVLVWGMNEGAVYLWTLPMFHCNGWCYTWALAAICGTNICLRQVTAKAIFSAIASQ 282
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH C A +VLN + ++P PL R V ++T+GA+PP +VL LGF V+H+YG
Sbjct: 283 GVTHFCAAPIVLNAIINAPPADTILPLPRVVDVMTAGAAPPPSVLASMSKLGFRVTHTYG 342
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W++L ERARL ARQG+R +G+ +DVV P++ V DG +
Sbjct: 343 LSETYGPSTVCAWKPEWDSLPADERARLHARQGIRYVGMEGLDVVDPKSMAPVPADGSTL 402
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + ++ +N WF++GD+GV H DGY+E+KDR+KD+IISGGE
Sbjct: 403 GEIVMRGNAVMKGYLKNPKANAEAF-ENGWFHSGDLGVRHPDGYIEVKDRAKDIIISGGE 461
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWEL---SKKPTEEAIIEFC 399
NISS EVE +Y++PA+ E ++VA+ D+ WG+ PCAF++LK + ++ I+ FC
Sbjct: 462 NISSLEVEKAVYLHPAVLEASVVARSDEQWGESPCAFITLKDGVDGSNEAALAGNIMSFC 521
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
R RLP Y KSV+ LPKTATGKI+K LR
Sbjct: 522 RERLPGYWVPKSVVF-GPLPKTATGKIKKHELR 553
>gi|149374522|ref|ZP_01892296.1| acyl-CoA synthase [Marinobacter algicola DG893]
gi|149361225|gb|EDM49675.1| acyl-CoA synthase [Marinobacter algicola DG893]
Length = 542
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 284/443 (64%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD + ++ +L H+E+K++ D + + A+S S KP++I
Sbjct: 102 RLDAEAIAFMLEHAEAKVVVADREFGGVVRDAVSRLDS-----KPLVIDVDDPEYGEGIQ 156
Query: 54 -DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D+ + G P F+W PE+EWD ++LNYTSGTT +PKGVV+ HRG ++ ++ +
Sbjct: 157 MSDLDYEAFLQEGDPEFQWNLPENEWDAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQA 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV+LWTLPMFH NGW + W + A+ GT++CLR+VD I +I+ H VTH+CG
Sbjct: 217 VWSMGQHPVYLWTLPMFHCNGWCFPWTVTAMAGTHVCLRRVDPEKILQLIRDHQVTHMCG 276
Query: 173 ALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN L + P + +D VK +T+GA+PPA V+ E +G ++H YGLTE G V
Sbjct: 277 APIVLNALLNVPESAKAGIDHEVKAMTAGAAPPAQVIGAIEEMGIAITHVYGLTEVYGPV 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAWK++W+ ERA +KARQGVR LA V P T V +DG++ GEI R
Sbjct: 337 TVCAWKAEWDEKTLDERATIKARQGVRYHTLAGTMVGDPSTMEPVPNDGKTIGEIFLRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + + R WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 TVMKGYLKNPKATEEAFR-GGWFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEVE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D WG+ PCAF++LK E S+ +EE +I+FCR RL + K
Sbjct: 456 DTLYRHPAVLEAAVVARPDAKWGETPCAFITLKPEASEV-SEEDLIDFCRERLARFKVPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+++ D LPKT+TGKIQKFVLR+
Sbjct: 515 TIVFTD-LPKTSTGKIQKFVLRD 536
>gi|170695568|ref|ZP_02886712.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
gi|170139555|gb|EDT07739.1| AMP-dependent synthetase and ligase [Burkholderia graminis C4D1M]
Length = 550
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/441 (45%), Positives = 273/441 (61%), Gaps = 18/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD ++ +L H E KLL VD + + L AL P+ P+ + I+D
Sbjct: 103 RLDADGIAFILRHGECKLLLVDREFAALVEKALQSVPNP---PRLIDINDHEAPDGAAIG 159
Query: 55 DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
+ S G P F P EW P+ALNYTSGTT PKGVV HRG +++++ + +W
Sbjct: 160 ETDYESLLASGDPAFAGRGPVDEWTPIALNYTSGTTGDPKGVVPSHRGTYLMSLLQMTNW 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P P++LWTLPMFH NGW ++W + A GT++CLRKV+ I S I+ HGV H C A
Sbjct: 220 PLPRAPIYLWTLPMFHANGWCFTWAITAAAGTHVCLRKVNAANILSAIQKHGVDHFCAAP 279
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VL ++S P + +PL R V++LT+G+ PAAVL ++GF V H +G+TE +G +S
Sbjct: 280 IVLAGIASMPQSERQPLPRRVRVLTAGSPAPAAVLEAVGAMGFDVDHVFGITEISGTPIS 339
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +W+TL ++ +LKARQGVR M V T V D QS GE++ R ++
Sbjct: 340 CAWHDEWDTLPPEQQGKLKARQGVRAAAFEKMSVADLATLEPVPADSQSCGEVLVRGNTV 399
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M+GYLK+ + + WF+TGD+ VVH DGY++I DRSKDVIISGGENISS EVE V
Sbjct: 400 MMGYLKNADATEKAFA-GGWFHTGDLAVVHPDGYIQITDRSKDVIISGGENISSVEVEEV 458
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
+Y + A+VAQ D WG+ PCAF+ LK + + TE+ +I FCR RL H+ + V
Sbjct: 459 IYRMSGVLNAAVVAQPDDTWGETPCAFIELKPDAAYI-TEQDVISFCRERLAHFKCPRRV 517
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+ ELPKTATGKIQKF LRE
Sbjct: 518 VF-GELPKTATGKIQKFRLRE 537
>gi|15227878|ref|NP_179356.1| putative AMP-binding protein [Arabidopsis thaliana]
gi|75313402|sp|Q9SEY5.1|AAE2_ARATH RecName: Full=Probable acyl-activating enzyme 2; AltName:
Full=AMP-binding protein 2; Short=AtAMPBP2
gi|20799713|gb|AAM28619.1|AF503761_1 adenosine monophosphate binding protein 2 AMPBP2 [Arabidopsis
thaliana]
gi|20198258|gb|AAM15484.1| putative amp-binding protein [Arabidopsis thaliana]
gi|26452396|dbj|BAC43283.1| putative acyl-CoA synthetase [Arabidopsis thaliana]
gi|29028964|gb|AAO64861.1| At2g17650 [Arabidopsis thaliana]
gi|330251567|gb|AEC06661.1| putative AMP-binding protein [Arabidopsis thaliana]
Length = 603
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/455 (47%), Positives = 285/455 (62%), Gaps = 29/455 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKP---VLIHD------- 54
RLD +SVLL HSE+K+LFVD+Q +A AL L + K VLI
Sbjct: 144 RLDPSTLSVLLAHSEAKILFVDHQLLEIAHGALDLLAKSDKTRKSLKLVLISQSNDDDDS 203
Query: 55 --------------DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCH 100
D + G F+ ++P EWDP+++NYTSGTTS PKGVV+ H
Sbjct: 204 DEDSSSTFASKYSFDYEYETLLKSGDSEFEIIKPRCEWDPISINYTSGTTSRPKGVVYSH 263
Query: 101 RGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYS 160
RG ++ +++++ ++ PV+LWT+PMFH NGW WG+AA GGTNICLRKV +I+
Sbjct: 264 RGAYLNSLATVFLHQMSVYPVYLWTVPMFHCNGWCLVWGVAAQGGTNICLRKVSPKMIFK 323
Query: 161 VIKHHGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVS 218
I H VTH+ GA VLNM+ + T KPL V+I+T G+ P +L + E LGF VS
Sbjct: 324 NIAMHKVTHMGGAPTVLNMIVNYTVTEHKPLPHRVEIMTGGSPPLPQILAKMEELGFNVS 383
Query: 219 HSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHD 278
H YGLTET G C WK +W++L+ ER +LKARQGV+ +GL +DV P T +V D
Sbjct: 384 HLYGLTETYGPGTHCVWKPEWDSLSLEERTKLKARQGVQHLGLEGLDVKDPLTMETVPDD 443
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
G + GE++FR ++M GY KD E + + DWF++GD+ V + DGY+EIKDR KDVII
Sbjct: 444 GLTMGEVMFRGNTVMSGYFKDIEATRKAF-EGDWFHSGDLAVKYPDGYIEIKDRLKDVII 502
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS EVE VL + A+ E A+VA+ D WG+ PC FV LK EE II F
Sbjct: 503 SGGENISSVEVERVLCSHQAVLEAAVVARPDHHWGQTPCGFVKLKEGFDTIKPEE-IIGF 561
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
CR LPHYMA K+++ D +PKT+TGK+QK++LR+
Sbjct: 562 CRDHLPHYMAPKTIVFGD-IPKTSTGKVQKYLLRK 595
>gi|357144806|ref|XP_003573420.1| PREDICTED: acetyl-coenzyme A synthetase-like [Brachypodium
distachyon]
Length = 1037
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/462 (44%), Positives = 288/462 (62%), Gaps = 29/462 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS-----------------NTILP 47
RLD SVLL HSE+KLLFVD P+A AL L S N P
Sbjct: 102 RLDAAMASVLLRHSEAKLLFVDAALLPVAAEALRLVSSAGANPPIAVLITELLDDNNTNP 161
Query: 48 KP----VLIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGL 103
P LI + A + +F PE E P+ALNYTSGTTS PKGV++ HRG
Sbjct: 162 PPSSSSALIEHEYEALMAGGSPAEDFTIRWPEDENWPIALNYTSGTTSRPKGVIYSHRGA 221
Query: 104 FIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
++ ++++++ + PV+LWT+PMFH NGW +WG+AA GG N+CLR+V + + +
Sbjct: 222 YLNSIAAVLLNDMAAMPVYLWTVPMFHCNGWCLAWGVAAQGGANVCLRRVTGAAVLAAVA 281
Query: 164 HHGVTHICGALVVLNMLSSS-----PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVS 218
HGVTH+ GA VL+M+++S P + + V ++T GA P AVL R ESLGF+V
Sbjct: 282 RHGVTHLGGAPTVLSMIANSADNTPPEPRKKKKKVVVMTGGAPPAPAVLHRMESLGFLVI 341
Query: 219 HSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHD 278
HSYGLTET G C WK +WN+L ERA +K+RQG+ IGL + D+ P T SV D
Sbjct: 342 HSYGLTETYGPATVCTWKPEWNSLPAAERAAIKSRQGLHHIGL-ESDIKDPSTMRSVPPD 400
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGV-VHSDGYLEIKDRSKDVI 337
G++ GE++FR ++M GY KD ++ W +GD+ V DGY++IKDR KD++
Sbjct: 401 GETMGEVMFRGNTVMSGYYKDPAATAESF-AGGWLRSGDLAVRTPGDGYVKIKDRKKDIV 459
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGEN+S+ EVE+ L+ +PA+ E A+V + D+FWG+ PCAFV +K + +K E ++E
Sbjct: 460 ISGGENVSTVEVEAALFAHPAVAEAAVVGRADEFWGETPCAFVVVKEGMGEKVGEGEVVE 519
Query: 398 FCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
FCR RLP +MA ++V+ +ELP+TATGK++KF LRE+ A+
Sbjct: 520 FCRRRLPAFMAPRTVVFLEELPRTATGKVKKFELREMARALG 561
>gi|144900132|emb|CAM76996.1| catalytic [Magnetospirillum gryphiswaldense MSR-1]
Length = 540
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/440 (45%), Positives = 281/440 (63%), Gaps = 19/440 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+KLL VD + S + AL PV DD + +
Sbjct: 104 RLDAEAITFILEHGEAKLLIVDREFSKVTKKALEGLKVKI----PVFDIDDPTYVGGELI 159
Query: 65 GHPNFK---------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
G ++ W P EWD +ALNYTSGTT +PKGVV+ HRG ++ VS+ + W
Sbjct: 160 GEGTYEDLLADELHPWTMPGDEWDAIALNYTSGTTGNPKGVVYHHRGAYLNAVSNALGWT 219
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+P+ PV+LWTLPMFH NGW + W MAA GT++CLR V V I +I+ V + CGA +
Sbjct: 220 LPDGPVYLWTLPMFHCNGWCFPWTMAAAAGTSVCLRHVRVEPILDLIRSENVGYFCGAPI 279
Query: 176 VLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
VLNM++++P+ + + +PVK++T+GA+PPAAV+ E +G+ V+H YGLTE G V+ C
Sbjct: 280 VLNMINNAPAALKEGISQPVKVMTAGAAPPAAVIAGMERMGWEVTHVYGLTEVYGPVIQC 339
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
W +WN L+ ++A++KARQGVR L + V P T DG + GEI R ++M
Sbjct: 340 VWHDKWNDLSIDDKAKIKARQGVRGPMLEAVMVADPMTLEPCPKDGMTMGEIFMRGNNVM 399
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GYLK+ + + + WF+TGD+ V H+DGY+EIKDRSKD+IISGGENISS EVE VL
Sbjct: 400 KGYLKNPKATVESF-EGGWFHTGDLAVWHADGYVEIKDRSKDIIISGGENISSIEVEDVL 458
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +P + E A+VA+ D+ WG+ PCAFVSLK TEE II FC+A + + ++++
Sbjct: 459 YKHPDVMEAAVVARPDEKWGETPCAFVSLK--DGATCTEEDIIAFCKAHMAGFKTPRTIV 516
Query: 414 IEDELPKTATGKIQKFVLRE 433
LPKT+TGKIQKF+LR+
Sbjct: 517 F-GPLPKTSTGKIQKFMLRQ 535
>gi|392378308|ref|YP_004985468.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
gi|356879790|emb|CCD00716.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
Length = 556
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/441 (46%), Positives = 281/441 (63%), Gaps = 19/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L HSE+KLL VD + SP+A AAL+ T P ++ D A +P++
Sbjct: 109 RLDAAAIAFILDHSETKLLIVDRELSPVAKAALA----RTERPITLVEIADEQAPDAPSL 164
Query: 65 GHPNFK----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G ++ W P+ EW +ALNYTSGTT +PKGVV+ HRG ++ + +
Sbjct: 165 GAVEYEDFLAAADPAPWHGPDDEWQAIALNYTSGTTGNPKGVVYHHRGAYLNALGNAFTL 224
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ + VFLWTLPMFH NGW+YSW + A GGT++CLR+V+ I+ I GVTH+CGA
Sbjct: 225 NVRPESVFLWTLPMFHCNGWTYSWAVTAAGGTHVCLRRVEPAAIFDAIAELGVTHLCGAP 284
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLNML +P+ +P R V + T GA+PP+AVL +LGF V H YGLTE G
Sbjct: 285 IVLNMLIHAPAAVRRPAPRRVIVGTGGAAPPSAVLAGMATLGFEVVHMYGLTECYGPATV 344
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA + W L A ARQGV + + D V+ ETG V D Q+ GEI R ++
Sbjct: 345 CAPQDGWEDLDADGLALQFARQGVNHVAVEDATVLDRETGRPVPADAQTIGEIALRGNTV 404
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + ++D WF TGD+GV+H DGY+E+KDRSKD+IISGGENISS EVE
Sbjct: 405 MKGYLKNPAATKEALKDG-WFRTGDLGVLHPDGYIEVKDRSKDIIISGGENISSLEVEEA 463
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D WG+ PCAFV++K +++P+E II++CR R+ HY ++V
Sbjct: 464 LYRHPAVLEAAVVARPDDRWGESPCAFVTVK-PGAERPSESDIIQWCRDRIAHYKVPRTV 522
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+ D LPKT+TGKIQK VLR+
Sbjct: 523 VFSD-LPKTSTGKIQKTVLRD 542
>gi|358448387|ref|ZP_09158891.1| acyl-CoA synthetase [Marinobacter manganoxydans MnI7-9]
gi|357227484|gb|EHJ05945.1| acyl-CoA synthetase [Marinobacter manganoxydans MnI7-9]
Length = 542
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/443 (46%), Positives = 281/443 (63%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD + ++ +L H E+K++ D + + A+S + KP++I
Sbjct: 102 RLDAEAIAFMLDHGEAKVVIADREFGEVIRDAVSRLDT-----KPLVIDVDDPEYGEGVQ 156
Query: 54 -DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D+ + G P F+W PE+EWD ++LNYTSGTT +PKGVV+ HRG +I + +
Sbjct: 157 VSDLDYEAFLQEGDPAFQWSFPENEWDAISLNYTSGTTGNPKGVVYHHRGAYINAIGNQT 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV+LWTLPMFH NGW + W + A+ GT++CLR+VD I +I+ H VTH+CG
Sbjct: 217 VWSMDMHPVYLWTLPMFHCNGWCFPWTITAMAGTHVCLRRVDPEKILQLIRDHQVTHMCG 276
Query: 173 ALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN L + P + +D VK +T+GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 APIVLNALLNVPESAKAGIDHDVKSMTAGAAPPAQVIGAIEEMGIQVTHVYGLTEVYGPV 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAWKS+W+ L +RAR KARQGVR LA V P T V DG++ GEI R
Sbjct: 337 TVCAWKSEWDALPLHDRARKKARQGVRYHTLAGTMVGDPNTMEPVPKDGKTIGEIFLRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + + R WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 TVMKGYLKNPKATEEAFR-GGWFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEVE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D+ WG+ PCAFV+LK E + + +EE II FCR L + K
Sbjct: 456 DTLYRHPAVLEAAVVARPDEKWGETPCAFVTLKPE-AGQVSEEDIINFCREHLARFKVPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+++ ELPKT+TGKIQKFVLR+
Sbjct: 515 TIVFS-ELPKTSTGKIQKFVLRD 536
>gi|344344385|ref|ZP_08775248.1| o-succinylbenzoate--CoA ligase [Marichromatium purpuratum 984]
gi|343804055|gb|EGV21958.1| o-succinylbenzoate--CoA ligase [Marichromatium purpuratum 984]
Length = 552
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 285/445 (64%), Gaps = 20/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-----------PSNTILPKPVLIH 53
RLD ++ +L H+E+ + VD + + + AL+ P T P+
Sbjct: 106 RLDAPAIAFILEHAEASAVLVDCECAEVVGRALARIEREILVIDIADPDFTDAQAPI--- 162
Query: 54 DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
++ S G + +W P+ EW + LNYTSGTT PKGVV+ HRG ++ +++++
Sbjct: 163 GEIDYESFLAEGDSDHQWSVPDDEWRAITLNYTSGTTGDPKGVVYHHRGAYLGAINNVLS 222
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +PN V+LWTLPMFH NGW + W MAA+ G N+CLR V I I GVTH+CGA
Sbjct: 223 WGLPNHAVYLWTLPMFHCNGWCFPWTMAAMAGVNVCLRHVRAHTIVETIAREGVTHLCGA 282
Query: 174 LVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL M++ P+ + + V+++T+GA PP++V+ E++GF V+H YGLTET G V
Sbjct: 283 PIVLKMINEVPTEAKAAITQSVRVMTAGAPPPSSVIAGMEAMGFEVTHVYGLTETYGPCV 342
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
+CAW +W+ LA ERARLKARQGVR A + V P T ++ DG + GEI+ R
Sbjct: 343 ACAWNDEWDELALDERARLKARQGVRMPMQAAIMVADPATLQPIRQDGVTLGEIMIRGNL 402
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E + D WF++GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 403 VMKGYLKNPETTRRAF-DRGWFHSGDLAVWHPDGYVEIKDRSKDIIISGGENISSIEVEE 461
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VL+ +P + +VA+VA+RD+ WG+ PCAF++L ++ + +E+A+I++CRAR+ H+ A K
Sbjct: 462 VLFGHPLVQDVAVVAKRDEKWGEVPCAFITLVADV--ELSEQAVIDYCRARMAHFKAPKH 519
Query: 412 VIIEDELPKTATGKIQKFVLREIVN 436
V+ LP+T TGK+QK++LR+ N
Sbjct: 520 VVFA-TLPRTPTGKLQKYLLRQWAN 543
>gi|449455591|ref|XP_004145536.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
gi|449512665|ref|XP_004164110.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
Length = 555
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/453 (45%), Positives = 289/453 (63%), Gaps = 23/453 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAAL-SLFPSNTILPKPVLIHDD-------- 55
R D VS LL HSE+K++ VDYQ + A+ ++ LP+ V+I +
Sbjct: 97 RHDAAMVSTLLSHSEAKIIVVDYQLEHIVTGAIKAMSERKEKLPRVVIIQEYDQPPSRID 156
Query: 56 --------VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
+ S G NF+ +P E DP+ALNYTSGTTS PKGV+ HRG ++ +
Sbjct: 157 RPGSALEYLEFESFLASGKLNFEIRRPRDELDPIALNYTSGTTSRPKGVIFSHRGAYLNS 216
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+S+++ + + PV+LWT+PMFH NGW +WG+AA GTNIC R V I+ I H V
Sbjct: 217 LSAVLLNDMCSLPVYLWTVPMFHCNGWCLTWGVAAQSGTNICQRNVTAKEIFDNISLHKV 276
Query: 168 THICGALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
TH+ GA V NM+ ++P KPL R V +++ GA PP+ VL + ++LGF + HSYGLTE
Sbjct: 277 THMGGAPTVSNMIINAPISEQKPLPREVTMMSGGAPPPSHVLYKLKALGFRIVHSYGLTE 336
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
T G C+WK +W++L ++A+L +RQG++ IGL DV P T SV DG++ GE+
Sbjct: 337 TYGPATVCSWKPEWDSLPQDKQAKLNSRQGLQHIGLEAADVKDPVTMESVPADGKTMGEV 396
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
+ R ++M GYLKD + + + WF +GD+GV H DGY+E+KDRSKD+IISGGENIS
Sbjct: 397 MLRGNTVMSGYLKDLKATREAF-NGGWFRSGDLGVKHPDGYIELKDRSKDIIISGGENIS 455
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPH 405
+ EVESVL+ +P++ + A+V + D WG+ PCAFV LK S TE II+FCR LPH
Sbjct: 456 TIEVESVLFSHPSVLDAAVVGRPDDHWGETPCAFVKLKDGCSA--TEGEIIKFCREHLPH 513
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
YMA +SV+ D LPKT+TGK QKF+L++ A+
Sbjct: 514 YMAPRSVVFRD-LPKTSTGKTQKFILKKEAKAM 545
>gi|410615676|ref|ZP_11326693.1| fatty-acyl-CoA synthase [Glaciecola psychrophila 170]
gi|410164802|dbj|GAC40582.1| fatty-acyl-CoA synthase [Glaciecola psychrophila 170]
Length = 588
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 284/445 (63%), Gaps = 21/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + + +L H+E+K+LFVD + S + AL + P++ + V+ DDV+ +
Sbjct: 146 RLDSESFAFILEHAEAKVLFVDKEFSGMVTKALDMLPNDFL----VIDIDDVNWQDGELI 201
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +++ W P EWD ++LNYTSGTT PKGVV+ HRG ++ VS+ +
Sbjct: 202 GSTDYEAFLETGDQHYNWQPPSDEWDAISLNYTSGTTGDPKGVVYHHRGAYLNAVSNAMS 261
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + PV+LWTLPMFH NGW + W +A + G N+CLR V I+ +IK V + CGA
Sbjct: 262 WGMQQHPVYLWTLPMFHCNGWCFPWTVALMAGVNVCLRHVQADAIFDLIKSEEVNYFCGA 321
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLNML+ + S+ ++ VK++T+GA PPA V+ E+LGF V+H YGLTET G V
Sbjct: 322 PIVLNMLNLADSSLKSGIEHKVKVMTAGAPPPAQVIEGMEALGFEVTHVYGLTETYGPSV 381
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW W+ + +ARLK+RQGVR L + V P+T + + DG++ GEI +
Sbjct: 382 VCAWHDDWSKQSPKNQARLKSRQGVRAPMLDGLMVADPDTLIPIPQDGKTIGEIFMQGNL 441
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + + WF +GD+ V H DGY+EIKDRSKD+IISGGENISS E+E
Sbjct: 442 VMKGYLKNPKTTEKAFK-GGWFQSGDLAVWHPDGYIEIKDRSKDIIISGGENISSIEIED 500
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P + E A+VA + + WG+ PCAFV+LK L++ TE+ +I+FCRA + H+ A
Sbjct: 501 VLYRHPLVQEAAVVAMKHEKWGETPCAFVTLK--LAETCTEQDLIDFCRAHMAHFKAPTR 558
Query: 412 VIIEDELPKTATGKIQKFVLREIVN 436
V+ ELPKT+TGK +KF LREI +
Sbjct: 559 VVF-GELPKTSTGKTRKFELREIAD 582
>gi|385330780|ref|YP_005884731.1| acyl-CoA synthetase [Marinobacter adhaerens HP15]
gi|311693930|gb|ADP96803.1| acyl-CoA synthetase [Marinobacter adhaerens HP15]
Length = 542
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/443 (46%), Positives = 280/443 (63%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD + ++ +L H E+K++ D + + A+S + KP++I
Sbjct: 102 RLDAEAIAFMLDHGEAKVVIADREFGEVIRDAVSRLDT-----KPLVIDVDDPEYGEGVQ 156
Query: 54 -DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D+ + G P F+W PE+EWD ++LNYTSGTT +PKGVV+ HRG +I + +
Sbjct: 157 VSDLDYEAFLQEGDPTFQWSFPENEWDAISLNYTSGTTGNPKGVVYHHRGAYINAIGNQT 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV+LWTLPMFH NGW + W + A+ GT++CLR+VD I +I+ H VTH+CG
Sbjct: 217 VWSMDMHPVYLWTLPMFHCNGWCFPWTITAMAGTHVCLRRVDPEKILQLIRDHQVTHMCG 276
Query: 173 ALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN L + P + +D VK +T+GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 APIVLNALLNVPESAKAGIDHDVKSMTAGAAPPAQVIGAIEEMGIQVTHVYGLTEVYGPV 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAWKS+W+ L +RAR KARQGVR LA V P T V DG++ GEI R
Sbjct: 337 TVCAWKSEWDALPLHDRARKKARQGVRYHTLAGTMVGDPNTMEPVPKDGKTIGEIFLRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + + R WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 TVMKGYLKNPKATEEAFR-GGWFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEVE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D+ WG+ PCAFV+LK E + +EE II FCR L + K
Sbjct: 456 DTLYRHPAVLEAAVVARPDEKWGETPCAFVTLKPE-AGDVSEEDIINFCREHLARFKVPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+++ ELPKT+TGKIQKFVLR+
Sbjct: 515 TIVFS-ELPKTSTGKIQKFVLRD 536
>gi|225431902|ref|XP_002276533.1| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
Length = 567
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 205/453 (45%), Positives = 283/453 (62%), Gaps = 27/453 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS---NTILPKPVLIHDDVSATSS 61
RL+ ++ LL HS + ++ VD + PLA AL ++ N P +++ D S
Sbjct: 103 RLNAPTIAFLLEHSSAAVVMVDQEFFPLAEEALKIWSGKSKNDFKPPLLIVIADESCDPK 162
Query: 62 P----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G P F W P+ EW +AL YTSGTT+SPKGVV HRG ++
Sbjct: 163 GLEYALRKGVIEYEQFLETGDPEFAWKPPQDEWQSIALGYTSGTTASPKGVVLHHRGAYV 222
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ +S + W + V+LWTLPMFH NGW ++W +AA+ GTNICLR+V IY I +
Sbjct: 223 MALSGALVWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICLRQVATKAIYQAIAND 282
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH+C A VVLN + ++P ++ PL R V ++T+GA+PP +VL GF V+H+YG
Sbjct: 283 GVTHLCAAPVVLNSIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSQQGFRVTHTYG 342
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L +ARL ARQGVR IGL +DVV V DG +
Sbjct: 343 LSETYGPSTVCAWKPEWDELPPETQARLNARQGVRYIGLEGLDVVSTTDMKPVPADGTTI 402
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + + N WF++GD+GV H DGY+++KDRSKD+IISGGE
Sbjct: 403 GEIVMRGNTVMKGYLKNPKANEETFA-NGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGE 461
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSK---KPTEEAIIEFC 399
NISS E+E+ +Y++PA+ E ++VA+ D WG+ PCAFV+LK + + + E I++FC
Sbjct: 462 NISSVEIENAVYLHPAVLEASVVARPDDRWGESPCAFVTLKPGVDRSDERRLAEDIMKFC 521
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
R+RLP Y KSV+ LPKTATGKIQK +LR
Sbjct: 522 RSRLPAYWIPKSVVF-GPLPKTATGKIQKHLLR 553
>gi|417862740|ref|ZP_12507790.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Agrobacterium
tumefaciens F2]
gi|338820002|gb|EGP53976.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Agrobacterium
tumefaciens F2]
Length = 547
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/448 (46%), Positives = 284/448 (63%), Gaps = 25/448 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ +L H E+K+ VD Q S +A AL+L S KPV++ +D A
Sbjct: 103 RLDAEAIAFILEHCEAKVFLVDKQFSSVAQDALALMQS-----KPVVVDIEDSLAEGGER 157
Query: 64 VGHPNFK-------------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+G+ ++ W PE E++ +ALNYTSGTT +PKGV++ HRG ++I++
Sbjct: 158 IGYYTYEEFLKRGHAEDPVYW--PEDEFEALALNYTSGTTGNPKGVLYHHRGAYLISLGQ 215
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
L+ ++ V+LWTLPMFH NGW +SW +AAVGGT++CLRKV I++ I+ H VTH+
Sbjct: 216 LLHHKMDADSVYLWTLPMFHCNGWCFSWAIAAVGGTHVCLRKVVPEDIFAAIETHNVTHL 275
Query: 171 CGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA VL ML S + + L RPV ++T+GA+PPAAVL TE+LGF+V H YG TE
Sbjct: 276 CGAPTVLGMLIDSGKAAGRKLYRPVSVMTAGAAPPAAVLKETEALGFIVRHVYGSTEMHS 335
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C W +W+TL R++ ARQGVRT M V P T V H+G + GEI+FR
Sbjct: 336 VTTLCDWHREWDTLDPEARSKKMARQGVRTAVTDAMMVADPITLEPVPHNGLAIGEILFR 395
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ E + + W++TGD+ VVH DGY+EIKDR+KD+IISGGENISS E
Sbjct: 396 GSFGMKGYLKNPEATEEAFK-GGWYHTGDLAVVHDDGYIEIKDRTKDIIISGGENISSIE 454
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
+E VL+ +PA++ A+VA WG+RPCAFV LK S + TE+ +++FCRARL Y
Sbjct: 455 IEDVLFKHPAVSYAAVVAMHSDRWGERPCAFVELKPGTSNQITEKELLDFCRARLAKYKV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVN 436
VI + +TATGK+QKF LR +V
Sbjct: 515 PDRVIF-GPIERTATGKVQKFRLRHLVQ 541
>gi|254509793|ref|ZP_05121860.1| acyl-CoA synthase [Rhodobacteraceae bacterium KLH11]
gi|221533504|gb|EEE36492.1| acyl-CoA synthase [Rhodobacteraceae bacterium KLH11]
Length = 542
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 201/441 (45%), Positives = 280/441 (63%), Gaps = 20/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD ++ +L+H+E+K+L VD + S + AL+ + ++ + I D
Sbjct: 104 RLDAPIITFILNHAEAKVLLVDPEFSGVVKQALAQVDHDVLV---IDIEDPDFDGGERLA 160
Query: 55 DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
D++ + G P F W P EWD + LNYTSGTT +PKGVV+ HRG + S+++ W
Sbjct: 161 DLTYEALLAEGDPEFNWSLPGDEWDAITLNYTSGTTGNPKGVVYHHRGAALNATSNILTW 220
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKV-DVPIIYSVIKHHGVTHICGA 173
+P ++LWTLPMFH NGW + W MAA GT++CLR V DVP IY + GVTH CGA
Sbjct: 221 GMPQHSIYLWTLPMFHCNGWCFPWTMAANAGTSVCLRAVRDVP-IYRAFRDEGVTHFCGA 279
Query: 174 LVVLNMLSSSPS-TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLNML+++P + + +K++T+GA PPA V+ E +G V+H YGLTET G V
Sbjct: 280 PIVLNMLANAPDHLRDFSQQIKVMTAGAPPPAKVIEAMEGMGIEVTHVYGLTETYGPSVV 339
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAWK +WN +RA LK RQGV+ + L+ + V P+T V DG++ GEI + +
Sbjct: 340 CAWKDEWNEQDPEDRAALKIRQGVKYVALSGLMVADPKTLQPVPADGETMGEIFMQGNIV 399
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + + + WF +GD+GV+H DGY+ +KDRSKD+IISGGENISS EVE +
Sbjct: 400 MKGYLKNPDATDKAF-NGGWFASGDLGVMHPDGYIALKDRSKDIIISGGENISSVEVEDI 458
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D+ WG+ PCAFV LK + E II FCR + H+ A K+V
Sbjct: 459 LYKHPAVMEAAVVARPDEKWGETPCAFVELKPQAEASADE--IIAFCRDNMAHFKAPKTV 516
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+ LPKT+TGKIQKF LR+
Sbjct: 517 VF-GALPKTSTGKIQKFKLRD 536
>gi|114705007|ref|ZP_01437915.1| acyl-CoA synthase [Fulvimarina pelagi HTCC2506]
gi|114539792|gb|EAU42912.1| acyl-CoA synthase [Fulvimarina pelagi HTCC2506]
Length = 542
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 209/449 (46%), Positives = 287/449 (63%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------------PKPVL 51
RLD V +L+H+E+ + VD + + +A A+ ++ P +
Sbjct: 103 RLDAATVGFILNHAEADIFMVDPEFADVAKGAVEKAGRELLVVDVPDEMYEGDNGPIGAM 162
Query: 52 IHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
+DD+ A G + ++ +P+ EW ++LNYTSGTT PKGVV+ HRG ++ +S+
Sbjct: 163 TYDDLLAE-----GDADAEYWKPDDEWSAISLNYTSGTTGDPKGVVYHHRGAYLNALSNA 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
DW I PV+LWTLPMFH NGW Y W +AA+ GT +CLR V I +I+ VTH C
Sbjct: 218 HDWGIKPHPVYLWTLPMFHCNGWCYCWTLAALAGTAVCLRAVREKPILDLIRQEKVTHFC 277
Query: 172 GALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L+S+P K L P+ +T+ A PPAAV+ R E++G V+H+YGLTET G
Sbjct: 278 GAPIVLNTLASAPDELKKDLPSPIYAMTAAAPPPAAVIKRVEAMGISVTHAYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAWKS+W++L D ERA +KARQGVR L D+ V P+T V DG++ GEI F
Sbjct: 338 AVVCAWKSEWDSLPDDERAAMKARQGVRYTVLDDIMVADPDTMKPVPKDGETIGEIFFSG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ E + +R N WF +GD+ V+H D Y+EIKDRSKD+IISGGENISS E+
Sbjct: 398 NNVMKGYLKNPEANKKSLR-NGWFASGDLAVMHEDNYIEIKDRSKDIIISGGENISSIEI 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY + I E A+VA+ D+ WG+ PCAFV L+ + TEE +IE+C+ + + A
Sbjct: 457 EGVLYKHDKIAEAAVVARPDEKWGETPCAFVVLR--QGETMTEEEVIEYCKENMARFKAP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K+VI DELPKT+TGKIQKFVLR+ A+
Sbjct: 515 KTVIF-DELPKTSTGKIQKFVLRKKAEAL 542
>gi|115443839|ref|NP_001045699.1| Os02g0119200 [Oryza sativa Japonica Group]
gi|41052614|dbj|BAD08123.1| putative adenosine monophosphate binding protein [Oryza sativa
Japonica Group]
gi|41053251|dbj|BAD07619.1| putative adenosine monophosphate binding protein [Oryza sativa
Japonica Group]
gi|113535230|dbj|BAF07613.1| Os02g0119200 [Oryza sativa Japonica Group]
Length = 571
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/461 (44%), Positives = 290/461 (62%), Gaps = 29/461 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-----DDVSAT 59
RLD SVLL HSE+KL+FVD +A A+ + P PVL+ DD S
Sbjct: 99 RLDAAMASVLLRHSEAKLIFVDCALLDVAHDAIRRISQSGATP-PVLVLISELLDDPSDA 157
Query: 60 SSPT----------VGH----PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
P+ VG+ P F P E +P+ALNYTSGTTS PKGV++ HRG ++
Sbjct: 158 KLPSGRVDYEYEHLVGNAGSSPEFAVRWPADENEPIALNYTSGTTSRPKGVIYSHRGAYL 217
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
++++++ + + PV+LWT+PMFH NGW +WG+AA GGTN+C+R+V I+ + H
Sbjct: 218 NSLAAVLLNDMASTPVYLWTVPMFHCNGWCMAWGVAAQGGTNVCVRRVTAATIFDAVARH 277
Query: 166 GVTHICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
GVTH+ GA VL+M+ +++ +P+ R V ++T GA PP VL R E GF+V HSYGL
Sbjct: 278 GVTHMGGAPTVLSMIVNATAEEQRPVARRVTVMTGGAPPPPKVLHRMEEQGFLVIHSYGL 337
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TET G C W+ +W+ L ERAR+K+RQGV GL ++DV P T SV DG++ G
Sbjct: 338 TETYGPATVCTWRPEWDALPAEERARIKSRQGVHHHGL-EVDVKDPATMRSVPRDGKTMG 396
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
E++ R ++M GY KD ++ + WF +GD+ V H DGY+++ DRSKD+IISGGEN
Sbjct: 397 EVMLRGNTVMSGYYKDGAATAEAL-AGGWFRSGDLAVRHEDGYVKVLDRSKDIIISGGEN 455
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK----WELSKKPTEEAIIEFC 399
IS+ EVE+ L+ +PA+ E A+V + D +WG+ PCAFV L+ EE ++ +C
Sbjct: 456 ISTIEVEAALFSHPAVEEAAVVGRPDDYWGETPCAFVKLRPGAAAAAKAGVVEEELMAYC 515
Query: 400 RARLPHYMAHKS-VIIEDELPKTATGKIQKFVLREIVNAVN 439
RARLP YMA ++ V++E+ LPKTATGK+QKF LR A+
Sbjct: 516 RARLPRYMAPRTVVVVEEGLPKTATGKVQKFELRARAKAMG 556
>gi|357120831|ref|XP_003562128.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 568
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 208/451 (46%), Positives = 279/451 (61%), Gaps = 28/451 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPK--PVLI---------- 52
R D VS LL HS +K+ FV+ + AAL + PVL+
Sbjct: 108 RHDAAMVSTLLEHSGAKVFFVESSLLDVGRAALKRLADSKTGAGSLPVLVPISDDGASSG 167
Query: 53 --------HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
D + +W P +E DP+ALNYTSGTTS PKGVV+ HRG +
Sbjct: 168 DDDDGSSCTADYEGLIENAPSGFDIRW--PLNELDPIALNYTSGTTSRPKGVVYSHRGAY 225
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ TV++++ + I +LWT+PMFH NGW+ WG+A GGTNICLR+ +I+ I
Sbjct: 226 LNTVATVLAYDITAMATYLWTVPMFHGNGWNLPWGVAMQGGTNICLRRFTAKVIFDNIVL 285
Query: 165 HGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
H V+H+ GA VLNM+ ++P+ KPL PV+++T+GA PP V++ E LGF+V YG
Sbjct: 286 HRVSHMGGAPTVLNMIINAPTADRKPLPGPVRVMTAGAPPPQRVIMGMEELGFMVYQMYG 345
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G C W +W+ L ERARLKARQG I + D+DV +T SV DG++
Sbjct: 346 LTETYGPATVCTWMPEWDALPAEERARLKARQGFHHIAMQDVDVKKLDTMESVPSDGKTM 405
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE++FR ++M GY KD + + M W +TGD+ V + DGY+++KDR+KD+IISGGE
Sbjct: 406 GEVMFRGNTVMRGYYKDIDATKESM-IGGWLHTGDLAVRNPDGYIQLKDRAKDIIISGGE 464
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVESV++ +PA+ E A+V++ D WG+ PCAFV LK TE II+FCR R
Sbjct: 465 NISSIEVESVIFRHPAVLEAAVVSRPDDHWGETPCAFVKLK--TGTNSTEAEIIDFCRER 522
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
LPHYMA K+V+ ED LPKT+TGK QKFVLRE
Sbjct: 523 LPHYMAPKTVVFED-LPKTSTGKTQKFVLRE 552
>gi|226508754|ref|NP_001147787.1| acyl-activating enzyme 11 [Zea mays]
gi|195613764|gb|ACG28712.1| acyl-activating enzyme 11 [Zea mays]
gi|414864595|tpg|DAA43152.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 578
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 207/445 (46%), Positives = 278/445 (62%), Gaps = 20/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD V+ +L HS +KL FVDY LA AL L + + V + DD+ + + +
Sbjct: 98 RLDAAAVATILRHSGAKLFFVDYDYVRLASDALRLLDAADV--PLVAVIDDIHSPTGARL 155
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P+ + EWD + L+YTSGTTS+PKGVV+ HRG ++ T S L+
Sbjct: 156 GELEYEALLAHGDPDADLPPLQDEWDAVTLSYTSGTTSAPKGVVYSHRGAYLSTTSLLLQ 215
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P +PV+LWTLPMFH NGW+++WGMAA GG N+C+R IY I H VTH+C A
Sbjct: 216 WGVPAEPVYLWTLPMFHCNGWTFTWGMAARGGVNVCIRDARPADIYRAIARHRVTHMCCA 275
Query: 174 LVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
VV ++L S + + L PV +LT GA PPAA+L R E +GF V+H+YGLTE G
Sbjct: 276 PVVFSILLDGDGDSDGAARQLQAPVHVLTGGAPPPAALLERVERIGFNVTHAYGLTEATG 335
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
++C W+ QW+ L ERARLKARQGV + LAD DV + +T +SV DG++ GEIV R
Sbjct: 336 PALACEWRDQWDRLPLPERARLKARQGVSVLSLADADVKNADTMLSVPRDGRTVGEIVLR 395
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
S+M GYL + E + R WF TGD+GVVH DGY+EIKDRSKDVIISGGENI S E
Sbjct: 396 GSSVMKGYLNNPEANESAFRAG-WFLTGDVGVVHPDGYIEIKDRSKDVIISGGENICSKE 454
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
+E VL+ +PA+ + A+VA WG+ PCAFV + + + +E ++ FC R+ +M
Sbjct: 455 LEEVLFRHPAVADAAVVAMPHPRWGETPCAFVVPR-DKAAVLSEGDVLAFCSKRMARFMV 513
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
K V + LP+ A GK++K LRE
Sbjct: 514 PKKVEVVGALPRNALGKVEKVKLRE 538
>gi|125537833|gb|EAY84228.1| hypothetical protein OsI_05608 [Oryza sativa Indica Group]
Length = 571
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/461 (44%), Positives = 290/461 (62%), Gaps = 29/461 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-----DDVSAT 59
RLD SVLL HSE+KL+FVD +A A+ + P PVL+ DD S
Sbjct: 99 RLDAAMASVLLRHSEAKLIFVDCALLDVAHDAIRRISQSGATP-PVLVLISELLDDPSDA 157
Query: 60 SSPT----------VGH----PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
P+ VG+ P F P E +P+ALNYTSGTTS PKGV++ HRG ++
Sbjct: 158 KLPSGRVDYEYEHLVGNAGSSPEFAVRWPADENEPIALNYTSGTTSRPKGVIYSHRGAYL 217
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
++++++ + + PV+LWT+PMFH NGW +WG+AA GGTN+C+R+V I+ + H
Sbjct: 218 NSLAAVLLNDMASTPVYLWTVPMFHCNGWCMAWGVAAQGGTNVCVRRVTAATIFDAVARH 277
Query: 166 GVTHICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
GVTH+ GA VL+M+ +++ +P+ R V ++T GA PP VL R E GF+V HSYGL
Sbjct: 278 GVTHMGGAPTVLSMIVNATAEEQRPVARRVTVMTGGAPPPPKVLHRMEEQGFLVIHSYGL 337
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TET G C W+ +W+ L ERAR+K+RQGV GL ++DV P T SV DG++ G
Sbjct: 338 TETYGPATVCTWRPEWDALPAEERARIKSRQGVHHHGL-EVDVKDPATMRSVPRDGKTMG 396
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
E++ R ++M GY KD ++ + WF +GD+ V H DGY+++ DRSKD+IISGGEN
Sbjct: 397 EVMLRGNTVMSGYYKDGAATAEAL-AGGWFRSGDLAVRHEDGYVKVLDRSKDIIISGGEN 455
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK----WELSKKPTEEAIIEFC 399
IS+ EVE+ L+ +PA+ E A+V + D +WG+ PCAFV L+ EE ++ +C
Sbjct: 456 ISTIEVEAALFSHPAVEEAAVVGRPDDYWGETPCAFVKLRPGAAAAAKAGVVEEELMAYC 515
Query: 400 RARLPHYMAHKS-VIIEDELPKTATGKIQKFVLREIVNAVN 439
RARLP YMA ++ V++E+ LPKTATGK+QKF LR A+
Sbjct: 516 RARLPRYMAPRTVVVVEEGLPKTATGKVQKFELRARAKAMG 556
>gi|225431900|ref|XP_002276434.1| PREDICTED: medium-chain-fatty-acid--CoA ligase [Vitis vinifera]
Length = 567
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/453 (45%), Positives = 284/453 (62%), Gaps = 27/453 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP---SNTILPKPVLIHDDVSATSS 61
RL+ ++ LL HS + ++ VD + PLA AL ++ N P +++ D S
Sbjct: 103 RLNAPTIAFLLEHSSAAVVMVDQEFFPLAEEALKIWSDKSKNDFKPPLLIVIADESCDPK 162
Query: 62 P----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G P F W P+ EW +AL YTSGTT+SPKGVV HRG +I
Sbjct: 163 ALEYALRKGVIEYEQFLETGDPEFAWKPPQDEWQSIALGYTSGTTASPKGVVLHHRGAYI 222
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ ++ + W + V+LWTLPMFH NGW ++W +AA+ GTNICLR+V+ IY I +
Sbjct: 223 MALTGALVWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICLRQVETKAIYQAIAND 282
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH+C A VVLN + ++P ++ PL R V ++T+GA+PP +VL GF V+H+YG
Sbjct: 283 GVTHLCAAPVVLNSIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSQQGFRVTHTYG 342
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L +ARL ARQGV+ IGL +DVV V DG +
Sbjct: 343 LSETYGPSTVCAWKPEWDELPPETQARLNARQGVQYIGLEGLDVVSTTDMKPVPADGTTI 402
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + + N WF++GD+GV H DGY+++KDRSKD+IISGGE
Sbjct: 403 GEIVMRGNTVMKGYLKNPKANEETFA-NGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGE 461
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSK---KPTEEAIIEFC 399
NISS EVE+ +Y++PA+ E ++VA+ D WG+ PCAFV+LK + + + E I++FC
Sbjct: 462 NISSVEVENAVYLHPAVLEASVVARPDDRWGESPCAFVTLKPGVDRSDERRLAEDIMKFC 521
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
R++LP Y KSV+ LPKTATGKIQK +LR
Sbjct: 522 RSKLPAYWIPKSVVF-GPLPKTATGKIQKHLLR 553
>gi|398806745|ref|ZP_10565645.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Polaromonas
sp. CF318]
gi|398087297|gb|EJL77890.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Polaromonas
sp. CF318]
Length = 550
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/445 (45%), Positives = 278/445 (62%), Gaps = 18/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD ++ +L H E KLL VD + + L AL P P+ + I+D
Sbjct: 103 RLDADGIAFILRHGECKLLLVDREFASLVRRALQGLPHP---PRVIDINDLEAPTGTALG 159
Query: 55 DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
D S G P F P EW P+ALNYTSGTT PKGVV HRG +++++ + DW
Sbjct: 160 DTDYESFLAGGDPAFPGRWPADEWSPIALNYTSGTTGDPKGVVPSHRGTYLMSLLQMTDW 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P PV+LWTLPMFH NGW ++W + A GT++CLRKV +++ I+ HGV H C A
Sbjct: 220 ALPRAPVYLWTLPMFHANGWCFTWAVTAAAGTHVCLRKVTAANVFAAIEEHGVDHFCAAP 279
Query: 175 VVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VL ++ +P + PL R V++LT+G+ PPAAVL ++GF V H +G+TE +G +S
Sbjct: 280 IVLAGIAGTPGDQRRPLPRRVRVLTAGSPPPAAVLEAVGAMGFEVDHVFGITEISGTAIS 339
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW+ W+ L ++++RLKARQGVR L + V P+T + V DG S GE++ R ++
Sbjct: 340 CAWQDGWDELPASQQSRLKARQGVRAAALEAVRVADPDTLVPVPRDGASSGELLIRGNTV 399
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M+GYLK+ G++ WF+TGD+ V+H+DG+L+I DRSKDVIISGGENISS EVE V
Sbjct: 400 MMGYLKN-PGATAKAFSGGWFHTGDVAVMHADGHLQITDRSKDVIISGGENISSVEVEEV 458
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY + A+VAQ D WG+ PCAFV LK + TE ++ FCR RL H+ + V
Sbjct: 459 LYQLTGVLHAAVVAQPDGKWGEVPCAFVELK-AAAPAITEADVMAFCRERLAHFKCPRRV 517
Query: 413 IIEDELPKTATGKIQKFVLREIVNA 437
I D LPKTATGKIQKF LR + +
Sbjct: 518 IFTD-LPKTATGKIQKFRLRALAGS 541
>gi|126667866|ref|ZP_01738832.1| acyl-CoA synthase [Marinobacter sp. ELB17]
gi|126627682|gb|EAZ98313.1| acyl-CoA synthase [Marinobacter sp. ELB17]
Length = 542
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/443 (44%), Positives = 280/443 (63%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD + ++ +L H+E+K++ VD + + L A+S KP++I
Sbjct: 102 RLDAEVIAYMLEHAEAKVILVDREFGEVILEAVSRLDK-----KPLIIDVDDPEYGEGVK 156
Query: 54 -DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D+ + G P ++W P EWD ++LNYTSGTT +PKGVV+ HRG ++ ++ +
Sbjct: 157 VSDLDYEAFLQEGDPEYQWDMPTDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNTA 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV+LWTLPMFH NGW + W + A+ GT++CLR+VD I +I+ H VTH+CG
Sbjct: 217 VWSMAMHPVYLWTLPMFHCNGWCFPWTITAMAGTHVCLRRVDPEKILQLIREHRVTHMCG 276
Query: 173 ALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN L + P S +D VK + +GA PPA V+ E +G ++H+YGLTE G V
Sbjct: 277 APIVLNALLNVPPASKAGIDHVVKAMVAGAPPPAQVIGAVEEMGIALTHTYGLTEVYGPV 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAWK +WN L ERA +K+RQGVR L + P T DG++ GEI R
Sbjct: 337 TVCAWKDRWNDLPLAERAAIKSRQGVRYHTLGGTMIADPGTMKPTPKDGKTIGEIFLRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + + R WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ E+E
Sbjct: 397 TVMKGYLKNPKATEEAFR-GGWFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEIE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+VLY +PA+ E A+VA+ D+ WG+ PCAFV+LK + + TE A+I+FCR + + K
Sbjct: 456 NVLYRHPAVMEAAVVARPDEKWGETPCAFVTLKPD-AGNVTEAAMIDFCRKHMARFKVPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+V+ D LPKT+TGK+QKF+LRE
Sbjct: 515 TVVFSD-LPKTSTGKVQKFLLRE 536
>gi|399911736|ref|ZP_10780050.1| acyl-CoA synthetase [Halomonas sp. KM-1]
Length = 543
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/444 (45%), Positives = 281/444 (63%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD + ++ +L H E++ + VD + + + A+S + KP++I D + T
Sbjct: 103 RLDAEAIAYMLEHGEAQAVLVDPEFAGVIEDAVS-----RLAIKPLVIDVDDALYEGETR 157
Query: 64 ------------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P + + PE EW ++LNYTSGTT PKGVV+ HRG ++ VS++
Sbjct: 158 HIGELEYEALLAEGDPEYAYQLPEDEWQAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNI 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
++W +P+ PV+LWTLPMFH NGW + W +AA GT++CLR+VD I +I VTH
Sbjct: 218 LEWAMPHHPVYLWTLPMFHCNGWCFPWTIAANAGTSVCLRRVDPKKIMDLIADEQVTHFS 277
Query: 172 GALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P+ + D PVK+ T+GA+PPA+V+ E LG V+H YGLTE G
Sbjct: 278 GAPIVLNGLVNLPAEQKREFDHPVKVTTAGAAPPASVIAGVEKLGIEVTHVYGLTEVYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW+ W+ L ERAR+KARQGVR L + V P T V DG++ GEI+ R
Sbjct: 338 VTVCAWREAWDELPLEERARIKARQGVRYHMLEALCVADPNTLEPVPKDGETIGEILMRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK++ + + + W++TGD+ V H+DGY+EIKDRSKD+IISGGENIS+ EV
Sbjct: 398 NNVMKGYLKNEAATEQAL-EGGWYHTGDLAVWHADGYIEIKDRSKDIIISGGENISTIEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E +Y +PA+ E A+VA+ D+ WG+ PCAFV LK + TE IIE CR L +
Sbjct: 457 EDAIYSHPAVEEAAVVAKPDEKWGETPCAFVKLKVGYGEV-TEADIIEHCRQHLARFKVP 515
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K+VI ELPKT+TGKIQKFVLRE
Sbjct: 516 KTVIF-TELPKTSTGKIQKFVLRE 538
>gi|72383783|ref|YP_293137.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
gi|72123126|gb|AAZ65280.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 559
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/441 (46%), Positives = 270/441 (61%), Gaps = 14/441 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS--------NTILPKPVLIHDDV 56
RLD V +L H E+K+LFVD + S LA AA+ S + + P LI +
Sbjct: 103 RLDADGVRFILRHGEAKVLFVDREFSALAAAAIDGLDSPPLVIDILDPLAPAGELI-GEF 161
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
G P F + PE EWD +ALNYTSGTTS PKGVV HRG +++++ L DW +
Sbjct: 162 EYEQFLQQGDPAFPGLYPEDEWDAIALNYTSGTTSDPKGVVPSHRGAYLMSLLQLTDWGM 221
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P P +LWTLP+FH NGW ++W + A GT++CLRKV+ I+ I+ H V H C A +V
Sbjct: 222 PRGPKYLWTLPLFHANGWCFAWAVTAAAGTHVCLRKVNAANIFHAIEAHSVDHFCAAPIV 281
Query: 177 LNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
L L+++ + PV+I T+G+ PPA+VL LGF V H YG+TE +G VS
Sbjct: 282 LASLATATDYERRSFSHPVRIRTAGSPPPASVLKAVSELGFDVEHVYGITEASGTPVSSF 341
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
WN ++ E+ARL ARQG R L + V P+T +V DG++QGE++ R +M
Sbjct: 342 VNPAWNDMSSDEKARLMARQGNRAAALEGLYVADPDTMSAVPRDGKTQGELMLRGNIVMK 401
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ E + WF TGD+ VVH DGY++I DRSKDVIISGGENISS EVE VL+
Sbjct: 402 GYLKNPEATQRAF-SGGWFRTGDVAVVHPDGYIQITDRSKDVIISGGENISSVEVEDVLH 460
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P++ A+VAQ WG+ PCAF+ LK +S +P EE II FCRARL HY V+
Sbjct: 461 QHPSVLIAAVVAQPHPKWGESPCAFIELKDGVS-EPAEEEIIAFCRARLAHYKCPVRVVY 519
Query: 415 EDELPKTATGKIQKFVLREIV 435
LPKT TGKIQK+ LREI
Sbjct: 520 -GPLPKTGTGKIQKYRLREIA 539
>gi|374705361|ref|ZP_09712231.1| AMP-binding protein [Pseudomonas sp. S9]
Length = 544
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/443 (45%), Positives = 281/443 (63%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ +L H E+K+L VD + S AL + +P+++ DD
Sbjct: 104 RLDAETIAFILQHGEAKVLLVDKEFSETVQRAL-----GQMAERPLVVGIDDAEYLEGSL 158
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P++ W P EW +ALNYTSGTT +PKGVV+ HRG + +S+ +
Sbjct: 159 IGELDYEALLVEGDPDYSWSLPADEWQAIALNYTSGTTGNPKGVVYHHRGAHLNALSNAM 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV LWTLPMFH NGW + W +AA GT++CLR V IY + HGV H CG
Sbjct: 219 CWDMTRFPVCLWTLPMFHCNGWFFPWALAAYIGTSVCLRHVRADAIYPALAEHGVDHFCG 278
Query: 173 ALVVLNMLSSSPST-KPLD-RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML+++P+ K L +PVK LT+GA+PPAAV+ E+L F V+H YGLTET G
Sbjct: 279 APIVLNMLANAPAELKALKTQPVKFLTAGAAPPAAVIEAMEALDFKVTHVYGLTETYGPS 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V+C WKS+W+ + ERA+LK+RQGVR L ++ V PET V DG++ GEI R
Sbjct: 339 VACEWKSEWDEASPEERAKLKSRQGVRAPLLDELMVADPETLQPVPKDGETIGEIFMRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ ++ WF++GD+ V H+DGY+EIKDRSKD+IISGGENISS E+E
Sbjct: 399 VVMKGYLKNPTATAEAFA-GGWFHSGDLAVWHADGYVEIKDRSKDIIISGGENISSIELE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +P + E A+VA + WG+ PCAF++LK + TEE+++ FC+A + +
Sbjct: 458 GILYRHPHVLEAAVVAMDSEKWGETPCAFITLK--PGAESTEESMLRFCQAHMARFKVPG 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGK+QKFVLRE
Sbjct: 516 KVVF-CELPKTSTGKVQKFVLRE 537
>gi|402568162|ref|YP_006617506.1| medium-chain-fatty-acid--CoA ligase AlkK [Burkholderia cepacia GG4]
gi|402249359|gb|AFQ49812.1| medium-chain-fatty-acid--CoA ligase AlkK [Burkholderia cepacia GG4]
Length = 551
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 212/446 (47%), Positives = 281/446 (63%), Gaps = 28/446 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + +S +L HSE K+L VD + + LA AL KP+++ D+ A P+
Sbjct: 103 RLDAEGISFILRHSECKVLLVDRKFANLACKALEPLDE-----KPLVVDIADLEAPPGPS 157
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G +F V P EWD +ALNYTSGTTS PKGVV HRG +++++ LI
Sbjct: 158 IGQLEYEALLAEGDSDFAGVWPVDEWDAIALNYTSGTTSDPKGVVASHRGTYLMSMLQLI 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
DW +PN V+LWTLPMFH NGW ++W + AV GT++CLRKV V I++ I GV H C
Sbjct: 218 DWCMPNGAVYLWTLPMFHANGWCFTWAITAVCGTHVCLRKVTVENIFAAIHESGVDHFCA 277
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VL+M++S+P+ KPL V+I T+G+ PPA VL GF V H YG+TE+ G
Sbjct: 278 APIVLSMMASAPAVDDKPLPHLVRIRTAGSPPPATVLKTIGERGFKVDHVYGITESLGTS 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
VSC + +W +L E+ARLKARQG R GL + V P T V DG++ GE++ R
Sbjct: 338 VSCTIRPEWESLPIEEQARLKARQGNRAAGLEGLRVADPVTLEPVPFDGKTHGELLLRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRD---NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
+M GYLK++ + RD WF TGD+ V+HSDGY++I DRSKDVIISGGENISS
Sbjct: 398 VLMKGYLKNETAT----RDAFAGGWFRTGDVAVMHSDGYIQITDRSKDVIISGGENISSV 453
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE +L+ + A+ A+VAQ D WG+ PCAFV L+ + PTE+ +IEFCR L HY
Sbjct: 454 EVEDILHRHAAVLAAAVVAQPDARWGEVPCAFVELR-PGAMAPTEQELIEFCRKHLAHYK 512
Query: 408 AHKSVIIEDELPKTATGKIQKFVLRE 433
V+ ELP+T TGK+QKF LRE
Sbjct: 513 CPARVVY-CELPRTGTGKVQKFKLRE 537
>gi|423206726|ref|ZP_17193282.1| hypothetical protein HMPREF1168_02917 [Aeromonas veronii AMC34]
gi|404622278|gb|EKB19143.1| hypothetical protein HMPREF1168_02917 [Aeromonas veronii AMC34]
Length = 544
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/443 (44%), Positives = 277/443 (62%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ + H++SK++ VD + P+ AL L S + V+ DD V
Sbjct: 108 RLDAESMAFIFQHAQSKVVLVDREFGPVVRKALDLLESQPL----VIAIDDPLYREGALV 163
Query: 65 GHPNFK------------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ W+ PE EW ++LNYTSGTT +PKGVV+ HRG + +++++
Sbjct: 164 SELTYEAFIATGNGDEPGWL-PEDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNVL 222
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P PV+LWTLPMFH NGW + W +AA G ++CLR V IY + H V+H C
Sbjct: 223 SWELPKHPVYLWTLPMFHCNGWCFPWTLAATAGVSVCLRHVQASAIYEALHEHRVSHFCA 282
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML+++ + LD P+K++T+GA+PPA V+ E++G V+H YGLTET G
Sbjct: 283 APIVLNMLNNADQALKQGLDHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPC 342
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V C + W T +RLKARQGV + +M VVHP +G V DG++ GEIV R
Sbjct: 343 VLCEPQRSWQGQDATTLSRLKARQGVASPLQGEMRVVHPVSGEPVPRDGKTMGEIVLRGN 402
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ S+ M D WF +GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 403 VVMKGYLKNPAASAEAMADG-WFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVE 461
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P ++E A++A D+ WG+ PCAFV LK ++ T+ +I FCR ++ H+ A K
Sbjct: 462 DVLYRHPDVDEAAVIAMPDEKWGEVPCAFVKLK--EGRETTQAELIAFCREQMAHFKAPK 519
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+I LPKT+TGK+QKFVLR+
Sbjct: 520 RIIF-TPLPKTSTGKVQKFVLRK 541
>gi|387813621|ref|YP_005429103.1| AMP-dependent synthetase/ligase [Marinobacter hydrocarbonoclasticus
ATCC 49840]
gi|381338633|emb|CCG94680.1| putative AMP-dependent synthetase/ligase [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 542
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/449 (45%), Positives = 282/449 (62%), Gaps = 22/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD + ++ +L H E+K++ D + + A+ KP++I
Sbjct: 102 RLDAEAIAFMLEHGEAKVVIADREFGQVIKDAVRHLEH-----KPLVIDVDDPEYGEGVQ 156
Query: 54 -DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D+ + G P F+W P++EWD ++LNYTSGTT +PKGVV+ HRG +I + +
Sbjct: 157 VSDLDYEAFLQEGDPQFQWSFPDNEWDAISLNYTSGTTGNPKGVVYHHRGAYINALGNQT 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV+LWTLPMFH NGW + W + A+ GT++CLR+VD I +I+ H VTH+CG
Sbjct: 217 VWSMDMHPVYLWTLPMFHCNGWCFPWTITAMAGTHVCLRRVDPEKILQLIRDHQVTHMCG 276
Query: 173 ALVVLN-MLSSSPSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN +L++SP K +D VK +T+GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 APIVLNALLNASPEAKAGIDHEVKSMTAGAAPPAQVIGSIEEMGIKVTHVYGLTEVYGPV 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAWKS+W+ L +RA++KARQGVR L V P T V DG++ GEI R
Sbjct: 337 TVCAWKSEWDELPLHDRAKIKARQGVRYHTLGGTMVADPNTMQPVPKDGKTIGEIFLRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + R WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 TVMKGYLKNPTATEEAFR-GGWFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEVE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D+ WG+ PCAF++LK E + +E+ II FCR L + K
Sbjct: 456 DTLYRHPAVLEAAVVARPDEKWGETPCAFITLKPE-AGDVSEDDIINFCREHLARFKVPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
+V+ ELPKT+TGKIQKFVLR+ +N
Sbjct: 515 TVVFT-ELPKTSTGKIQKFVLRDQAKDLN 542
>gi|319794296|ref|YP_004155936.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
gi|315596759|gb|ADU37825.1| AMP-dependent synthetase and ligase [Variovorax paradoxus EPS]
Length = 550
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/440 (44%), Positives = 270/440 (61%), Gaps = 16/440 (3%)
Query: 4 QRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP- 62
RLD + ++ +L H E KLL VD + + AAL L P + I+D ++ P
Sbjct: 102 HRLDAEGIAFILRHGECKLLLVDREFAATVAAALKLLDHA---PAVIDINDHLAPPGEPI 158
Query: 63 ---------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F P EW P+ALNYTSGTT PKGVV HRG +++++ + +
Sbjct: 159 GETDYESLLANGDPEFAGRWPGDEWQPIALNYTSGTTGDPKGVVASHRGTYLMSLLQITN 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P +LWTLPMFH NGW ++W + A GT++CLR+V + I H + H+C A
Sbjct: 219 WAMPRAPKYLWTLPMFHANGWCFTWAVTASAGTHVCLRRVSAEAVLEAIDRHEIDHLCAA 278
Query: 174 LVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
VV+ ML+ + L RPV++LT+G+ PP AVL ++GF V H +G+TE +G VSC
Sbjct: 279 PVVMAMLADAAKDTRLPRPVRVLTAGSPPPLAVLNAVLAMGFDVEHVFGITEVSGTPVSC 338
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
AW+ W+ LA E+ L+ RQGVR + V +T V DG+S GE++ R ++M
Sbjct: 339 AWQDGWDDLAPAEQGALRVRQGVRAAMFEGLMVGDADTLEPVVPDGKSAGELMLRGNTVM 398
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
+GY K++ + + D WF TGD+ V+H++GY +I DRSKDVIISGGENISS E+E V+
Sbjct: 399 MGYFKNEAATRKALADG-WFRTGDVAVLHANGYAQITDRSKDVIISGGENISSVEIEDVV 457
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
+ +PA+ A+VAQ D+ WG+ PC F+ LK ++ PTE+ II FCR RL H+ + VI
Sbjct: 458 HGHPAVLHAAVVAQPDEKWGEVPCVFIELKTGVA-APTEQEIISFCRERLAHFKCPRRVI 516
Query: 414 IEDELPKTATGKIQKFVLRE 433
LPKTATGKIQKF LRE
Sbjct: 517 FT-PLPKTATGKIQKFRLRE 535
>gi|147854579|emb|CAN82780.1| hypothetical protein VITISV_017128 [Vitis vinifera]
Length = 567
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/453 (45%), Positives = 282/453 (62%), Gaps = 27/453 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS---NTILPKPVLIHDDVSATSS 61
RL+ ++ LL HS + ++ VD + PLA AL ++ N P +++ D S
Sbjct: 103 RLNAPTIAFLLEHSSAAVVMVDQEFFPLAEEALKIWSGKSKNDFKPPLLIVIADESCDPK 162
Query: 62 P----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G P F W P+ EW +AL YTSGTT+SPKGVV HRG +I
Sbjct: 163 GLEYALRKGVIEYEQFLETGDPEFAWKPPQDEWQSIALGYTSGTTASPKGVVLHHRGAYI 222
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ ++ + W + V+LWTLPMFH NGW ++W +AA+ GTNICLR+V IY I +
Sbjct: 223 MALTGALVWGMNEGAVYLWTLPMFHCNGWCFTWTLAALCGTNICLRQVATKAIYQAIAND 282
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH+C A VVLN + ++P ++ PL R V ++T+GA+PP +VL GF V+H+YG
Sbjct: 283 GVTHLCAAPVVLNSIVNAPKSETILPLPRVVHVMTAGAAPPPSVLFAMSQQGFRVTHTYG 342
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L +ARL ARQGV IGL +DVV V DG +
Sbjct: 343 LSETYGPSTVCAWKPEWDELPPETQARLNARQGVXYIGLEGLDVVSTTDMKPVPADGTTI 402
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + + N WF++GD+GV H DGY+++KDRSKD+IISGGE
Sbjct: 403 GEIVMRGNTVMKGYLKNPKANEETFA-NGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGE 461
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSK---KPTEEAIIEFC 399
NISS EVE+ +Y++PA+ E ++VA+ D WG+ PCAFV+LK + + + E I++FC
Sbjct: 462 NISSVEVENAVYLHPAVLEASVVARPDDRWGESPCAFVTLKPGVDRSDERRLAEDIMKFC 521
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
R++LP Y KSV+ LPKTATGKIQK +LR
Sbjct: 522 RSKLPAYWIPKSVVF-GPLPKTATGKIQKHLLR 553
>gi|224099191|ref|XP_002311397.1| predicted protein [Populus trichocarpa]
gi|222851217|gb|EEE88764.1| predicted protein [Populus trichocarpa]
Length = 566
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/452 (46%), Positives = 286/452 (63%), Gaps = 26/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKP---VLIHDDVSATSS 61
RL+ + ++ LL HS+S+++ VD + L AL ++ N KP V+I D S
Sbjct: 103 RLNAQAIAFLLGHSKSEVVMVDQEFFTLVEEALKIWEGNEKNFKPPLLVVIGDKSCDPKS 162
Query: 62 PTV---------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
G P F W PE EW +AL YTSGTTSSPKGVV HRG +++
Sbjct: 163 LEYALGRGAIEYEKFLESGDPEFDWKPPEDEWQSIALGYTSGTTSSPKGVVLSHRGAYLM 222
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+S+ + W + ++LWTLPMFH NGW ++W +AA+ +ICLR+V IYS I + G
Sbjct: 223 CLSNPVIWGMDEGAIYLWTLPMFHCNGWCFTWTLAALCVKSICLRQVTAKAIYSAIAYAG 282
Query: 167 VTHICGALVVLNML---SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
V+H C A VVLN + S + PL R V ++T+GA+PP +VL GF V+H+YGL
Sbjct: 283 VSHFCAAPVVLNTIINASKEETILPLPRLVHVMTAGAAPPPSVLFSMSEKGFRVTHTYGL 342
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
+ET G CAWK +W++L ++ARL ARQGVR +GL +DVV +T V DG++ G
Sbjct: 343 SETYGPSTVCAWKPEWDSLPPIKQARLNARQGVRYVGLERLDVVDTKTMKPVPADGKTMG 402
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R +M GYLK+ + + N WF++GD+GV + DGY+EIKDRSKD+IISGGEN
Sbjct: 403 EIVMRGNVVMKGYLKNPKANEEAFA-NGWFHSGDLGVKNPDGYIEIKDRSKDIIISGGEN 461
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA---IIEFCR 400
ISS EVE+VLYM+PAI EV++VA+ + WG+ PCAFV+LK E+ K ++ I++F R
Sbjct: 462 ISSLEVENVLYMHPAIYEVSVVARLHERWGESPCAFVTLKPEMEKSDKQQLIDDIMKFSR 521
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
+ +P Y +S++ LPKTATGKIQK VLR
Sbjct: 522 SNMPAYWVPRSIVF-GPLPKTATGKIQKHVLR 552
>gi|149375957|ref|ZP_01893724.1| acyl-CoA synthase [Marinobacter algicola DG893]
gi|149359837|gb|EDM48294.1| acyl-CoA synthase [Marinobacter algicola DG893]
Length = 542
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/442 (45%), Positives = 279/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD K ++ +L H E+K+L D + + A+ + + P+ + ++D
Sbjct: 102 RLDAKAIAFMLEHGEAKVLIADREFGDVINEAVGMLDNP---PQVIDVNDPEFSGAGTQV 158
Query: 55 -DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
D+ + G P F W P EWD ++L YTSGTT +PKGVV+ HRG + + +
Sbjct: 159 SDLDYDAFVASGDPAFDWQMPADEWDAISLCYTSGTTGNPKGVVYHHRGAYENAMGNQAV 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + PV+LWTLPMFH NGW + W + A GT++CLRKV+ I +I H V+H+CGA
Sbjct: 219 WSMGMHPVYLWTLPMFHCNGWCFPWTITAFAGTHVCLRKVEPEKILQLISEHKVSHMCGA 278
Query: 174 LVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L +S + V+ +T+GA+PPA V+ E++GF V+H YGLTE G V
Sbjct: 279 PIVLNTLLGASEAAKSSFSHTVQAMTAGAAPPAKVIEAIENMGFRVTHVYGLTEVYGPVT 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAWKS+W+ L +RAR+KARQGVR LA M V PET +V DG + GEI R +
Sbjct: 339 VCAWKSEWDDLPVEDRARIKARQGVRYHTLAGMMVGDPETMEAVPKDGNTIGEIFLRGNT 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + R WF+TGD+ V H+DGY EIKDR KD+IISGGENIS+ EVE
Sbjct: 399 VMKGYLKNPKATEEAFR-GGWFHTGDLAVWHADGYAEIKDRLKDIIISGGENISTIEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P I E A+VA+ D+ WG+ PCAFV+LK E + + +E+ II FCR R+ + K+
Sbjct: 458 VLYRHPDILEAAVVARPDEKWGETPCAFVTLKPE-AGEVSEDDIIAFCRERMAKFKVPKT 516
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
++ ELPKT+TGKIQKFVLR+
Sbjct: 517 IVFS-ELPKTSTGKIQKFVLRD 537
>gi|242037047|ref|XP_002465918.1| hypothetical protein SORBIDRAFT_01g048090 [Sorghum bicolor]
gi|241919772|gb|EER92916.1| hypothetical protein SORBIDRAFT_01g048090 [Sorghum bicolor]
Length = 554
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/455 (46%), Positives = 285/455 (62%), Gaps = 27/455 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHDDVSATS--- 60
R D VSVLL HSE+K+ V+ Q +A AL L + + LP + I D ++T
Sbjct: 97 RHDAAMVSVLLKHSEAKVFLVESQFLAVARDALRLLADAKSKLPLVITISDAAASTGGSS 156
Query: 61 --------------SPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
S T G + +W P+ E +P++LNYTSGTTS PKGV++ HRG F+
Sbjct: 157 SNDGTVMEYEALLRSATRGF-DIRW--PDDELEPISLNYTSGTTSRPKGVIYSHRGAFLN 213
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++++++ + PV+LWT+PMFH NGW W AA GGT++C+ V +I+ I HG
Sbjct: 214 SLATVLGNEMVTMPVYLWTVPMFHCNGWCMVWATAAQGGTSVCIGSVIPRVIFDHIVRHG 273
Query: 167 VTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VT++ GA VLNM+ ++P+ KPL R V+I T GA PP VL + + LGF V H YGLT
Sbjct: 274 VTNMGGAPTVLNMIVNAPAAEQKPLPRRVRISTGGAPPPPQVLAKMDELGFDVVHGYGLT 333
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G C WK +WN L ERAR+KA QGV L ++ + P T ++ DG + GE
Sbjct: 334 ETYGPATVCVWKPEWNALPPLERARIKALQGVAHTMLQEVAIKDPATMETLPSDGCAVGE 393
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++ R ++M GY KD + +R W TGD+GV H DGY++IKDRSKD+IISGGENI
Sbjct: 394 VMLRGNTVMSGYYKDAAATEEAVR-GGWLRTGDLGVRHRDGYIQIKDRSKDIIISGGENI 452
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVESVL+ +PA+ + A+VA+ D WG+ PCAFV+LK T + II FCRARLP
Sbjct: 453 SSIEVESVLFGHPAVLDAAVVARPDDHWGETPCAFVTLK--NGATATADDIIGFCRARLP 510
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
HYMA ++V+ D LPKT+TGK QK++LRE A+
Sbjct: 511 HYMAPRTVVFSD-LPKTSTGKTQKYLLREKATAMG 544
>gi|352103599|ref|ZP_08959951.1| acyl-CoA synthetase [Halomonas sp. HAL1]
gi|350599284|gb|EHA15375.1| acyl-CoA synthetase [Halomonas sp. HAL1]
Length = 542
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/439 (46%), Positives = 276/439 (62%), Gaps = 13/439 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL---ALAALSLFPSNTILPKPVLIHD-----DV 56
RLD + +S +L H E+K + VD + + + A+A L+ P + + D ++
Sbjct: 102 RLDAEAISYMLEHGEAKAILVDPEFAEVIQQAVAKLTHKPLIIDVADVEFLGDTQGIGEI 161
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ G NF + P EWD ++LNYTSGTT PKGVV+ HRG ++ VS++++W +
Sbjct: 162 EYEALLNEGDANFAYQLPADEWDAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNIMEWAM 221
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P+ P++LWTLPMFH NGW + W +AA G N+CLR+VD I +I VTH GA ++
Sbjct: 222 PHHPIYLWTLPMFHCNGWCFPWTIAANAGVNVCLRRVDPKKIMQLIAEEKVTHFSGAPII 281
Query: 177 LNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
LN L + P+ D PVK+ T+GA+PPA+V+ E LG V+H YGLTE G V CA
Sbjct: 282 LNGLVNLPAEDKCQFDHPVKVTTAGAAPPASVISGVEKLGIEVTHVYGLTEVYGPVTVCA 341
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ W+ L RA++KARQGVR L + V P T V DGQ+ GEI+ R ++M
Sbjct: 342 WREAWDELPLEARAKIKARQGVRYHMLEALCVADPLTMEPVPKDGQTMGEILMRGNNVMK 401
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ E + + D W++TGD+ V H DGY+EIKDRSKD+IISGGENIS+ EVE +Y
Sbjct: 402 GYLKNPEATEQAL-DGGWYHTGDLAVWHPDGYIEIKDRSKDIIISGGENISTIEVEDAIY 460
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ E A+VA+ D+ WG+ PCAFV LK + TE II CR L Y K+VI
Sbjct: 461 GHPAVEEAAVVAKPDEKWGETPCAFVKLKVGYGEV-TEADIIAHCREHLAGYKVPKTVIF 519
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKT+TGKIQKFVLRE
Sbjct: 520 -SELPKTSTGKIQKFVLRE 537
>gi|89093400|ref|ZP_01166349.1| AMP-binding protein [Neptuniibacter caesariensis]
gi|89082379|gb|EAR61602.1| AMP-binding protein [Oceanospirillum sp. MED92]
Length = 549
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/453 (45%), Positives = 281/453 (62%), Gaps = 31/453 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI------------ 52
RLD + V+ +L H+ESK+L D + S + AL L KP +I
Sbjct: 105 RLDSEAVAFILKHAESKVLITDREFSSVVKGALELLDE-----KPFVIDIDDPYWSEGEF 159
Query: 53 -----HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
+DD AT G +F + EW+ + LNYTSGTT +PKGVV+ HRG ++
Sbjct: 160 IGETKYDDFLAT-----GDEHFVPHKVADEWNAITLNYTSGTTGNPKGVVYHHRGAYLNA 214
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+S+ I W + V+LWTLPMFH NGW + W +AA+ G N+CLR V I++ IK V
Sbjct: 215 ISNSISWGMDQHAVYLWTLPMFHCNGWCFPWTIAAMAGVNVCLRHVRADDIFNAIKREKV 274
Query: 168 THICGALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
+ CGA +VLNML+S+ ++ VK++T+GA+PPAAV+ ESLGF V+H YGLTE
Sbjct: 275 GYFCGAPIVLNMLNSADDELKTGIEHQVKVMTAGAAPPAAVIAGMESLGFSVTHVYGLTE 334
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
T G V CAW +W+ + ++ARLKARQGVR L + V P T V DG++ GEI
Sbjct: 335 TYGPSVVCAWHDEWDEKSLDDKARLKARQGVRAPMLDGLMVADPVTMKPVPKDGETMGEI 394
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
+ +M GYLK+ + + + WF++GD+ V H DGY+EIKDRSKD+IISGGENIS
Sbjct: 395 FMQGNLVMKGYLKNPDTTEKSF-EGGWFHSGDLAVWHEDGYIEIKDRSKDIIISGGENIS 453
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPH 405
S EVE VLY +P + E A+VA+ + WG+ PCAFV+LK + TE+ II+FCR + H
Sbjct: 454 SIEVEDVLYRHPLVQEAAVVAKNHEKWGETPCAFVALKEGSDRDITEKEIIDFCREHMAH 513
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+ A K ++ D LPKT+TGKIQKF+LR+ N V
Sbjct: 514 FKAPKDIVFGD-LPKTSTGKIQKFLLRDRANGV 545
>gi|407782410|ref|ZP_11129623.1| acyl-CoA synthetase [Oceanibaculum indicum P24]
gi|407206140|gb|EKE76102.1| acyl-CoA synthetase [Oceanibaculum indicum P24]
Length = 541
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/444 (44%), Positives = 275/444 (61%), Gaps = 24/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD ++ +L H E+K+L D + + AAL + +P++I D P
Sbjct: 102 RLDAATIAFILEHGEAKVLITDREFAGTIAAAL-----KQVRVRPLVIDIDDPLYDGPGE 156
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P+F W P EWD ++LNYTSGTT PKGVV+ HRG ++ + ++
Sbjct: 157 HLGSLDYEAFIADGDPDFAWHLPADEWDAISLNYTSGTTGDPKGVVYHHRGAYLNALGNV 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W +P V+LWTLPMFH NGW + W + A GT++CLR+V+ IY HGVTH+C
Sbjct: 217 LAWNMPRHAVYLWTLPMFHCNGWCFPWTVTAQAGTHVCLRRVEAKAIYDAFADHGVTHLC 276
Query: 172 GALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V+ +L ++ + D P V+++T+ A PPA+++ E+LG V+H YGLTE G
Sbjct: 277 GAPIVMGLLVNAKPEERRDFPQQVEMMTAAAPPPASIIQGMEALGIKVTHVYGLTEVYGP 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
VV CAW+ +W+TL E+AR+KARQGV L + V PET V D + GE+ R
Sbjct: 337 VVVCAWQPEWDTLPVEEQARIKARQGVNYPVLEGLMVADPETLAPVPADAATMGEVFMRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + R WF+TGD+GV+H DGY+E+KDRSKD+IISGGENIS+ EV
Sbjct: 397 NVVMKGYLKNPAATEKAFR-GGWFHTGDLGVLHPDGYVELKDRSKDIIISGGENISTIEV 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ E A+VA+ D+ WG+ PCAFV+ K + TE II FCR L +
Sbjct: 456 EGVLYRHPAVMEAAVVARPDEKWGETPCAFVNPK--PGQSVTEAEIIAFCRQHLAGFKVP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K+VI D LPKT+TGK+QKFVLR+
Sbjct: 514 KTVIFGD-LPKTSTGKVQKFVLRD 536
>gi|120555009|ref|YP_959360.1| acyl-CoA synthetase [Marinobacter aquaeolei VT8]
gi|120324858|gb|ABM19173.1| AMP-dependent synthetase and ligase [Marinobacter aquaeolei VT8]
Length = 542
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/449 (45%), Positives = 281/449 (62%), Gaps = 22/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD + ++ +L H E+K++ D + + A+ KP++I
Sbjct: 102 RLDAEAIAFMLEHGEAKVVIADREFGQVIKDAVRHLEH-----KPLVIDVDDPEYGEGVQ 156
Query: 54 -DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D+ + G P F+W P++EWD ++LNYTSGTT +PKGVV+ HRG +I + +
Sbjct: 157 VSDLDYEAFLQEGDPQFQWSFPDNEWDAISLNYTSGTTGNPKGVVYHHRGAYINALGNQT 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV+LWTLPMFH NGW + W + A+ GT++CLR+VD I +I H VTH+CG
Sbjct: 217 VWSMDMHPVYLWTLPMFHCNGWCFPWTITAMAGTHVCLRRVDPEKILQLIHDHQVTHMCG 276
Query: 173 ALVVLN-MLSSSPSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN +L++SP K +D VK +T+GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 APIVLNALLNASPEAKAGIDHEVKSMTAGAAPPAQVIGSIEEMGIKVTHVYGLTEVYGPV 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAWKS+W+ L +RA++KARQGVR L V P T V DG++ GEI R
Sbjct: 337 TVCAWKSEWDELPLHDRAKIKARQGVRYHTLGGTMVADPNTMQPVPKDGKTIGEIFLRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + R WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 TVMKGYLKNPTATEEAFR-GGWFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEVE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D+ WG+ PCAF++LK E + +E+ II FCR L + K
Sbjct: 456 DTLYRHPAVLEAAVVARPDEKWGETPCAFITLKPE-AGDVSEDDIINFCREHLARFKVPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
+V+ ELPKT+TGKIQKFVLR+ +N
Sbjct: 515 TVVFT-ELPKTSTGKIQKFVLRDQAKDLN 542
>gi|410620979|ref|ZP_11331834.1| fatty-acyl-CoA synthase [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410159541|dbj|GAC27208.1| fatty-acyl-CoA synthase [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 544
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/445 (45%), Positives = 277/445 (62%), Gaps = 21/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + + +L H+E+K+LFVD + S + AL + P+N + V+ DD+ +
Sbjct: 105 RLDSQTFAFILQHAEAKVLFVDREFSEMVAKALDMIPNNYL----VIDIDDLYWQGGELI 160
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G N++ W P+ EWD + LNYTSGTT PKGVV+ HRG ++ +S+ +
Sbjct: 161 GSINYEAFLATGELSYHWQPPQDEWDAITLNYTSGTTGDPKGVVYHHRGAYLNAISNAMS 220
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + P++LWTLPMFH NGW + W +A + G N+CLR V I+ +IK V + CGA
Sbjct: 221 WGMHQHPIYLWTLPMFHCNGWCFPWTVALMAGVNVCLRHVRADTIFDLIKQEKVGYFCGA 280
Query: 174 LVVLNMLS-SSPSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLNML + S K ++ V ++T+GA PPAAV+ ESLGF V+H YGLTET G V
Sbjct: 281 PIVLNMLKLADDSVKSGIEHKVNVMTAGAPPPAAVIQGMESLGFKVTHVYGLTETYGPSV 340
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW W+ L ++A+LK+RQGVR L + V P T V DG + GEI +
Sbjct: 341 VCAWHDDWSELPLEKQAQLKSRQGVRAPMLDGLMVADPVTLKPVPQDGLTMGEIFMQGNL 400
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ ++ + WF++GD+ V H+DGY+EIKDRSKD+IISGGENISS E+E
Sbjct: 401 VMKGYLKNPTTTNKAF-EGGWFHSGDLAVWHADGYIEIKDRSKDIIISGGENISSIEIED 459
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P+I E A+VA WG+ PCAFV+LK L + T II FCR +P + A
Sbjct: 460 VLYRHPSIQEAAVVAMEHVKWGETPCAFVTLK--LGQSATAREIINFCRDHMPRFKAPTR 517
Query: 412 VIIEDELPKTATGKIQKFVLREIVN 436
V+ ELPKT+TGKI+KF LR++ N
Sbjct: 518 VVFA-ELPKTSTGKIKKFELRDMAN 541
>gi|15228909|ref|NP_188316.1| acyl-activating enzyme 7 [Arabidopsis thaliana]
gi|75304477|sp|Q8VZF1.1|AEE7_ARATH RecName: Full=Acetate/butyrate--CoA ligase AAE7, peroxisomal;
AltName: Full=AMP-binding protein 7; Short=AtAMPBP7;
AltName: Full=Acetyl-CoA synthetase; AltName:
Full=Acyl-activating enzyme 7; AltName: Full=Butyryl-CoA
synthetase; AltName: Full=Protein ACETATE NON-UTILIZING
1
gi|20799723|gb|AAM28624.1|AF503766_1 adenosine monophosphate binding protein 7 AMPBP7 [Arabidopsis
thaliana]
gi|18086379|gb|AAL57649.1| AT3g16910/K14A17_3 [Arabidopsis thaliana]
gi|19699128|gb|AAL90930.1| AT3g16910/K14A17_3 [Arabidopsis thaliana]
gi|332642362|gb|AEE75883.1| acyl-activating enzyme 7 [Arabidopsis thaliana]
Length = 569
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/458 (44%), Positives = 280/458 (61%), Gaps = 37/458 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS---------------------- 42
RL+ V+ LL HS+S ++ VD + LA +L L
Sbjct: 105 RLNAPTVAFLLSHSQSSVIMVDQEFFTLAEDSLRLMEEKAGSSFKRPLLIVIGDHTCAPE 164
Query: 43 --NTILPKPVLIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCH 100
N L K + ++D AT G PN+ W P EW +AL YTSGTT+SPKGVV H
Sbjct: 165 SLNRALSKGAIEYEDFLAT-----GDPNYPWQPPADEWQSIALGYTSGTTASPKGVVLHH 219
Query: 101 RGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYS 160
RG +I+ +S+ + W + + V+LWTLPMFH NGW + W +A + GT+ICLR+V +YS
Sbjct: 220 RGAYIMALSNPLIWGMQDGAVYLWTLPMFHCNGWCFPWSLAVLSGTSICLRQVTAKEVYS 279
Query: 161 VIKHHGVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVV 217
+I + VTH C A VVLN + ++P PL V ++T+GA+PP +VL GF V
Sbjct: 280 MIAKYKVTHFCAAPVVLNAIVNAPKEDTILPLPHTVHVMTAGAAPPPSVLFSMNQKGFRV 339
Query: 218 SHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKH 277
+H+YGL+ET G CAWK +W++L +A+L ARQGVR G+ +DV+ +TG V
Sbjct: 340 AHTYGLSETYGPSTVCAWKPEWDSLPPETQAKLNARQGVRYTGMEQLDVIDTQTGKPVPA 399
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
DG++ GEIVFR +M GYLK+ E + WF++GDI V H D Y+EIKDRSKDVI
Sbjct: 400 DGKTAGEIVFRGNMVMKGYLKNPEANKETFA-GGWFHSGDIAVKHPDNYIEIKDRSKDVI 458
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTE---EA 394
ISGGENISS EVE+V+Y +PA+ E ++VA+ D+ W + PCAFV+LK + K +
Sbjct: 459 ISGGENISSVEVENVVYHHPAVLEASVVARPDERWQESPCAFVTLKSDYEKHDQNKLAQD 518
Query: 395 IIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
I++FCR +LP Y KSV+ LPKTATGKIQK +LR
Sbjct: 519 IMKFCREKLPAYWVPKSVVF-GPLPKTATGKIQKHILR 555
>gi|7670021|dbj|BAA94975.1| AMP-binding protein [Arabidopsis thaliana]
Length = 571
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/458 (44%), Positives = 280/458 (61%), Gaps = 37/458 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS---------------------- 42
RL+ V+ LL HS+S ++ VD + LA +L L
Sbjct: 107 RLNAPTVAFLLSHSQSSVIMVDQEFFTLAEDSLRLMEEKAGSSFKRPLLIVIGDHTCAPE 166
Query: 43 --NTILPKPVLIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCH 100
N L K + ++D AT G PN+ W P EW +AL YTSGTT+SPKGVV H
Sbjct: 167 SLNRALSKGAIEYEDFLAT-----GDPNYPWQPPADEWQSIALGYTSGTTASPKGVVLHH 221
Query: 101 RGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYS 160
RG +I+ +S+ + W + + V+LWTLPMFH NGW + W +A + GT+ICLR+V +YS
Sbjct: 222 RGAYIMALSNPLIWGMQDGAVYLWTLPMFHCNGWCFPWSLAVLSGTSICLRQVTAKEVYS 281
Query: 161 VIKHHGVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVV 217
+I + VTH C A VVLN + ++P PL V ++T+GA+PP +VL GF V
Sbjct: 282 MIAKYKVTHFCAAPVVLNAIVNAPKEDTILPLPHTVHVMTAGAAPPPSVLFSMNQKGFRV 341
Query: 218 SHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKH 277
+H+YGL+ET G CAWK +W++L +A+L ARQGVR G+ +DV+ +TG V
Sbjct: 342 AHTYGLSETYGPSTVCAWKPEWDSLPPETQAKLNARQGVRYTGMEQLDVIDTQTGKPVPA 401
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
DG++ GEIVFR +M GYLK+ E + WF++GDI V H D Y+EIKDRSKDVI
Sbjct: 402 DGKTAGEIVFRGNMVMKGYLKNPEANKETFA-GGWFHSGDIAVKHPDNYIEIKDRSKDVI 460
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSK---KPTEEA 394
ISGGENISS EVE+V+Y +PA+ E ++VA+ D+ W + PCAFV+LK + K +
Sbjct: 461 ISGGENISSVEVENVVYHHPAVLEASVVARPDERWQESPCAFVTLKSDYEKHDQNKLAQD 520
Query: 395 IIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
I++FCR +LP Y KSV+ LPKTATGKIQK +LR
Sbjct: 521 IMKFCREKLPAYWVPKSVVF-GPLPKTATGKIQKHILR 557
>gi|399545600|ref|YP_006558908.1| medium-chain-fatty-acid--CoA ligase [Marinobacter sp. BSs20148]
gi|399160932|gb|AFP31495.1| Medium-chain-fatty-acid--CoA ligase [Marinobacter sp. BSs20148]
Length = 542
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/443 (44%), Positives = 279/443 (62%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD + ++ +L H+E+K++ VD + + L A+S KP++I
Sbjct: 102 RLDAEVIAFMLEHAEAKVILVDREFGEVILDAVSRLDK-----KPLIIDVDDPEYGEGVK 156
Query: 54 -DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D+ + G P ++W P EWD ++LNYTSGTT +PKGVV+ HRG ++ ++ +
Sbjct: 157 VSDLDYEAFLQEGDPEYQWDMPTDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNTA 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV+LWTLPMFH NGW + W + A+ GT++CLR+VD I +I+ H VTH+CG
Sbjct: 217 VWSMAMHPVYLWTLPMFHCNGWCFPWTITAMAGTHVCLRRVDPEKILQLIREHRVTHMCG 276
Query: 173 ALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN L + P S +D VK + +GA PPA V+ E +G ++H+YGLTE G V
Sbjct: 277 APIVLNALLNVPPASKAGIDHVVKAMVAGAPPPAQVIGAVEEMGIALTHTYGLTEVYGPV 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAWK +WN L ERA +K+RQGVR L + P T DG++ GEI R
Sbjct: 337 TVCAWKDRWNDLPLEERAAIKSRQGVRYHTLGGTMIADPGTMKPTPKDGKTIGEIFLRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + + R WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ E+E
Sbjct: 397 TVMKGYLKNPKATEEAFR-GGWFHTGDLAVWHEDGYMEIKDRLKDIIISGGENISTIEIE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+VLY +PA+ E A+VA+ D+ WG+ PCAFV+LK + + TE II+FCR + + K
Sbjct: 456 NVLYRHPAVMEAAVVARPDEKWGETPCAFVTLKPD-AGNVTEAEIIDFCRKHMARFKVPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+V+ D LPKT+TGK+QKF+LR+
Sbjct: 515 TVVFSD-LPKTSTGKVQKFLLRD 536
>gi|399522347|ref|ZP_10763011.1| fatty-acyl-CoA synthase [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399109781|emb|CCH39572.1| fatty-acyl-CoA synthase [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 539
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 281/449 (62%), Gaps = 25/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + +S +L H E+K++ D + + AA+ + L P L+ D
Sbjct: 101 RLDAEAISFMLQHGEAKVVIADREFFDVIHAAIGM------LDHPPLVIDVDDPEYGEGQ 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G P F W P EW ++LNYTSGTT +PKGVV+ HRG F+ + +
Sbjct: 155 AVSDLDYEAFLAEGDPEFAWQWPTDEWQAISLNYTSGTTGNPKGVVYHHRGAFLNAMGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ VTH+C
Sbjct: 215 MTWAMGNHPVYLWTLPMFHCNGWCYPWTITALAGVHVFLRRVDPAKILTLIRDEQVTHLC 274
Query: 172 GALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P + +D PVK + +GA+PPA V+ E +G V+H YGLTE G
Sbjct: 275 GAPIVLNALVNMPAEAKAAIDHPVKAMVAGAAPPAKVIGAVEEMGIAVTHVYGLTEVYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW ++W+ L ERA +KARQGVR L + V P+T V DGQ+ GEI R
Sbjct: 335 VTLCAWHAEWDELPLEERATIKARQGVRYPTLEGVMVADPKTLEPVPRDGQTIGEIFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ ++ + WF+TGD+GV H+DGY+EI+DR KD+IISGGENIS+ EV
Sbjct: 395 NTVMKGYLKNPSATAEAF-EGGWFHTGDLGVCHADGYVEIRDRLKDIIISGGENISTIEV 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ E A+VA+ D+ WG+ PCAF++LK ++ ++ I+ FCR L +
Sbjct: 454 EGVLYRHPAVLEAAVVARPDEKWGETPCAFITLK--TGQQASDSEIMSFCREHLAGFKVP 511
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K+V+ +LPKT+TGKIQKFVLR++ A+
Sbjct: 512 KTVVF-TQLPKTSTGKIQKFVLRDMAKAL 539
>gi|302761206|ref|XP_002964025.1| hypothetical protein SELMODRAFT_81559 [Selaginella moellendorffii]
gi|300167754|gb|EFJ34358.1| hypothetical protein SELMODRAFT_81559 [Selaginella moellendorffii]
Length = 573
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/456 (44%), Positives = 285/456 (62%), Gaps = 24/456 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF--PSNTILPKP--VLIHDDV---S 57
RLD + V+ L H+S K + VD + L AL + + T+ P V+I D+
Sbjct: 113 RLDQRTVATLFHYSGVKAVLVDEEFLHLISGALRDWTAKAGTLFQAPFVVVIRDEFFQGM 172
Query: 58 ATSSP----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
S P G P+F+W +PE E + ++++YTSGTT+SPKGV+ HRG ++
Sbjct: 173 ENSWPPGSSDYEDFLREGDPSFEWTRPEDETETISVSYTSGTTASPKGVMLTHRGAYLSA 232
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+S + W + + ++LWTLP+FH NGW + W +AA+ GTNICLR+V I++ I H V
Sbjct: 233 LSECVTWEMKHGCIYLWTLPLFHCNGWCFPWAVAALAGTNICLRQVTAKGIFAAIAEHNV 292
Query: 168 THICGALVVLNMLSSSPSTKPLD----RPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
T+ C A VLN + S+ + R V+I+T+GA+PPA VL + E+LGF V+H YGL
Sbjct: 293 TNFCAAPTVLNTIISAATGSTFSRLQHRQVRIMTAGAAPPATVLAKIEALGFHVTHVYGL 352
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TET G C W +W+ L+ E+ARLKARQGV+ +GL + V++ ET V DG + G
Sbjct: 353 TETYGPCTVCEWNPEWDNLSPDEQARLKARQGVKYVGLDGLQVLNSETLEPVAKDGVTIG 412
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
E+ R + GYL + E + R WF++GD+ V H DGY+EIKDR+KD+IISGGEN
Sbjct: 413 EVCMRGNMVFKGYLNNPEATLESFR-GGWFHSGDLAVWHPDGYIEIKDRAKDIIISGGEN 471
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL 403
ISS EVES+LY +PA+ E A+VA+ D+ WG+ PCAFVSLK+ + + EE I+ FCR L
Sbjct: 472 ISSLEVESILYRHPAVLEAAVVARPDEKWGESPCAFVSLKYGV--RSNEEEILSFCRQHL 529
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
P +M KSV+I L KTATGKIQK VLR A+
Sbjct: 530 PKFMVPKSVVILAALDKTATGKIQKQVLRSKARALG 565
>gi|115452559|ref|NP_001049880.1| Os03g0305100 [Oryza sativa Japonica Group]
gi|108707723|gb|ABF95518.1| AMP-binding enzyme family protein, expressed [Oryza sativa Japonica
Group]
gi|113548351|dbj|BAF11794.1| Os03g0305100 [Oryza sativa Japonica Group]
Length = 574
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/454 (45%), Positives = 282/454 (62%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN---TILPKPVLIHDDVSATSS 61
RL+ + ++ LL HS ++++ VD + LA +L + + P +++ D +
Sbjct: 110 RLNAETIAFLLDHSVAEVVMVDQEFFTLAEESLKILAEKKKWSFRPPILIVIGDPTCDPK 169
Query: 62 P----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
P G P F W P+ EW +AL YTSGTTSSPKGVV HRG ++
Sbjct: 170 PLQYALGRGAIEYEEFLKTGDPEFAWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYV 229
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ + + W +P V+LWTLPMFH NGW Y+W MAA+ GTNICLR+V IYS I +H
Sbjct: 230 MALGVAMVWGMPEGAVYLWTLPMFHCNGWCYTWAMAAMCGTNICLRQVSSKAIYSGIVNH 289
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH+C A VV N L ++P+++ PL R V I+ +GA+P ++L GF V+H+YG
Sbjct: 290 GVTHMCAAPVVFNNLINAPASETFLPLPRVVNIMVAGAAPTPSLLAALSIRGFRVTHTYG 349
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L ER+RL RQGVR L +DVV P+T V DG+S
Sbjct: 350 LSETYGPSTVCAWKPEWDRLPLEERSRLHCRQGVRYGALEGLDVVDPKTMAPVAADGKSY 409
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + ++ W+++GD+GV H DGY+E+KDR KD+IISGGE
Sbjct: 410 GEIVMRGNAVMKGYLKNPKANAEAFA-GGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGE 468
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA----IIEF 398
NISS EVE VLY +PA+ E ++VA+ D+ WG+ PCAFV+LK E + E A I+ F
Sbjct: 469 NISSLEVEKVLYAHPAVLEASVVARADEQWGESPCAFVTLK-EGADSSDEAAVAGDIMRF 527
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
CR R+P Y KSV+ LPKTATGKI+K LR
Sbjct: 528 CRERMPGYWVPKSVVF-GPLPKTATGKIKKHELR 560
>gi|389876703|ref|YP_006370268.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Tistrella
mobilis KA081020-065]
gi|388527487|gb|AFK52684.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Tistrella
mobilis KA081020-065]
Length = 545
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/438 (43%), Positives = 277/438 (63%), Gaps = 13/438 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI---LPKPVLIHDD----VS 57
RLD + ++ +L H+E+K+LF D + S + A L L + + P + H D +
Sbjct: 107 RLDPEALAFILKHAETKVLFTDREFSGVIKATLELLDDKPLVIDIDDPAITHGDFLGEIE 166
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P++ W P EW ++L YTSGTT PKGVV+ HRG ++ V++++ W +P
Sbjct: 167 YEALLAEGDPDYAWEMPADEWQSISLGYTSGTTGDPKGVVYSHRGAWMNGVNNILTWDLP 226
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH +GW + + M A GT +CLR+V+ I+ I+ HGVTH+CGA VL
Sbjct: 227 KGSVYLWTLPMFHCSGWCFPYTMVAAAGTQVCLRRVEAKAIFDAIETHGVTHLCGAPTVL 286
Query: 178 NMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+L ++P+ + D ++++T+ ++PP++V+ E++GF ++H YGLTE G VV C W
Sbjct: 287 GLLVNAPAEVKRNFDHKIQMMTAASAPPSSVIAGMEAMGFEITHVYGLTEVYGPVVVCEW 346
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
K +W+ ERAR+KARQGVR + V PET V DGQ+ GE++ R M G
Sbjct: 347 KPEWDAKPLEERARIKARQGVRYALQQGLTVADPETLEPVPADGQTMGEVMMRGNITMKG 406
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK++ + WF++GD+GV+H DGY+E+KDRSKD+IISGGENISS EVE VLY
Sbjct: 407 YLKNKSATDKAFA-GGWFHSGDLGVMHPDGYIELKDRSKDIIISGGENISSIEVEEVLYS 465
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ E A+VA+ D+ WG+ PCAF++LK TE I E C L + K+ +
Sbjct: 466 HPAVMEAAVVARPDEKWGETPCAFITLK--PGSTVTETEIREHCAKHLARFKLPKTFVFT 523
Query: 416 DELPKTATGKIQKFVLRE 433
D LPKT+TGK+QKFVLRE
Sbjct: 524 D-LPKTSTGKVQKFVLRE 540
>gi|89092343|ref|ZP_01165297.1| AMP-binding protein [Neptuniibacter caesariensis]
gi|89083431|gb|EAR62649.1| AMP-binding protein [Oceanospirillum sp. MED92]
Length = 542
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/442 (44%), Positives = 281/442 (63%), Gaps = 21/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H+ESK++ V+ + S + AL + ++ + V+ DD + +
Sbjct: 105 RLDAEAIAFILQHAESKVVIVEREFSDVVQKALRIAGTSPL----VIDIDDPTYEGGELI 160
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W P EWD + LNYTSGTT +PKGVV+ HRG ++ +S+++
Sbjct: 161 GSMDYEAFIAEGDPEFAWQPPADEWDAITLNYTSGTTGNPKGVVYHHRGAYLNAMSNIVS 220
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + P +LWTLPMFH NGW + W +AA GT++ LR V IY +I+ VTH CGA
Sbjct: 221 WDMGRHPNYLWTLPMFHCNGWCFPWSIAAAAGTSVSLRHVRDQDIYDLIRKEKVTHFCGA 280
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLNML+++P ++ +K++T+GA+PPAAV+ E +G V+H YGLTET G V
Sbjct: 281 PIVLNMLNNAPDEMKAGIEHEIKVMTAGAAPPAAVIQGMEEMGIEVTHVYGLTETYGPSV 340
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +W+ + ++ARLK+RQGV+ L + V +PET V DG++ GEI R
Sbjct: 341 VCAWHDKWDDNSLEDKARLKSRQGVKAPMLEGLMVANPETLEPVPQDGETMGEIFMRGNL 400
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF++GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 401 VMKGYLKNPSTTDESF-EGGWFHSGDLAVWHEDGYIEIKDRSKDIIISGGENISSIEVED 459
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ E A+VA+ D+ WG+ PCAF+ K + + T E I EFCR + + A K+
Sbjct: 460 VLYRHPAVMEAAVVAKSDEKWGEVPCAFIKTKEGV--EVTAEEIKEFCRNNMARFKAPKA 517
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
++ ELPKT+TGKIQKFVLRE
Sbjct: 518 IVF-GELPKTSTGKIQKFVLRE 538
>gi|222624777|gb|EEE58909.1| hypothetical protein OsJ_10548 [Oryza sativa Japonica Group]
Length = 659
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/454 (45%), Positives = 282/454 (62%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN---TILPKPVLIHDDVSATSS 61
RL+ + ++ LL HS ++++ VD + LA +L + + P +++ D +
Sbjct: 195 RLNAETIAFLLDHSVAEVVMVDQEFFTLAEESLKILAEKKKWSFRPPILIVIGDPTCDPK 254
Query: 62 P----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
P G P F W P+ EW +AL YTSGTTSSPKGVV HRG ++
Sbjct: 255 PLQYALGRGAIEYEEFLKTGDPEFAWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYV 314
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ + + W +P V+LWTLPMFH NGW Y+W MAA+ GTNICLR+V IYS I +H
Sbjct: 315 MALGVAMVWGMPEGAVYLWTLPMFHCNGWCYTWAMAAMCGTNICLRQVSSKAIYSGIVNH 374
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH+C A VV N L ++P+++ PL R V I+ +GA+P ++L GF V+H+YG
Sbjct: 375 GVTHMCAAPVVFNNLINAPASETFLPLPRVVNIMVAGAAPTPSLLAALSIRGFRVTHTYG 434
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L ER+RL RQGVR L +DVV P+T V DG+S
Sbjct: 435 LSETYGPSTVCAWKPEWDRLPLEERSRLHCRQGVRYGALEGLDVVDPKTMAPVAADGKSY 494
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + ++ W+++GD+GV H DGY+E+KDR KD+IISGGE
Sbjct: 495 GEIVMRGNAVMKGYLKNPKANAEAF-AGGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGE 553
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA----IIEF 398
NISS EVE VLY +PA+ E ++VA+ D+ WG+ PCAFV+LK E + E A I+ F
Sbjct: 554 NISSLEVEKVLYAHPAVLEASVVARADEQWGESPCAFVTLK-EGADSSDEAAVAGDIMRF 612
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
CR R+P Y KSV+ LPKTATGKI+K LR
Sbjct: 613 CRERMPGYWVPKSVVF-GPLPKTATGKIKKHELR 645
>gi|163793174|ref|ZP_02187150.1| acyl-CoA synthase [alpha proteobacterium BAL199]
gi|159181820|gb|EDP66332.1| acyl-CoA synthase [alpha proteobacterium BAL199]
Length = 541
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/446 (45%), Positives = 280/446 (62%), Gaps = 19/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD ++ +L H+ESKL+ VD + + + A++ S P + ++D ++ P
Sbjct: 103 RLDAPTIAFILDHAESKLVIVDREFTAVMAEAVAASRSK---PPVIWVNDPLAEHGEPLG 159
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P F WV P EW +ALNYTSGTT +PKGVV HRG F+ + I +
Sbjct: 160 EAEYEELLAAGDPEFAWVGPTDEWQAIALNYTSGTTGNPKGVVFHHRGAFLNASGNAIAF 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ + +LWTLPMFH NGW+++W + AV GT++CLRKVD +I+ I + V+H+CGA
Sbjct: 220 GLNRETRYLWTLPMFHCNGWTFTWAVTAVCGTHVCLRKVDPTLIFPSIADNLVSHMCGAP 279
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VL ML +P T + D V I T GA+PP+AV+ E +GF V+H YGLTET G
Sbjct: 280 IVLTMLIHAPETVRRRFDHTVSIATGGAAPPSAVIAGMERMGFKVTHLYGLTETYGPSTI 339
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +W+ L +AR ARQGV+ + M VV ETG V DGQ+ GE+ R ++
Sbjct: 340 CAWPPEWDALEPDAKARKMARQGVQYPTIEGMRVVDTETGRDVPLDGQTIGELWLRGNTV 399
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + + + + WF+TGD+ V+H DGY E+KDRSKD+IISGGENISS EVE V
Sbjct: 400 MKGYLKNPKATGEALAEG-WFHTGDLAVLHPDGYAEVKDRSKDIIISGGENISSLEVEDV 458
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L+ +P + E A+VA+ D+ WG+ PCAFV++K S T E +I +CR + + A K+V
Sbjct: 459 LFRHPGVMEAAVVARSDERWGETPCAFVTVKPGASL--TAEEVIAYCRENMARFKAPKTV 516
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ ELPKT+TGKIQKFVLRE A+
Sbjct: 517 VF-GELPKTSTGKIQKFVLRERAEAL 541
>gi|448746987|ref|ZP_21728651.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
gi|445565497|gb|ELY21607.1| AMP-dependent synthetase/ligase [Halomonas titanicae BH1]
Length = 542
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/444 (45%), Positives = 276/444 (62%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD + +S +L H E+K + VD + + + A++ + KP++I
Sbjct: 102 RLDAEAISYMLEHGEAKAILVDPEFAEVIQQAVA-----KLTHKPLIIDVADVEFLGETQ 156
Query: 54 --DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
++ + G NF + P EWD ++LNYTSGTT PKGVV+ HRG ++ VS++
Sbjct: 157 GIGEIEYEALLNEGDTNFAYQLPGDEWDAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNI 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
++W +P+ P++LWTLPMFH NGW + W +AA G N+CLR+VD I +I VTH
Sbjct: 217 MEWAMPHHPIYLWTLPMFHCNGWCFPWTIAANAGVNVCLRRVDPKKIMQLIAEEKVTHFS 276
Query: 172 GALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA ++LN L + P+ D PVK+ T+GA+PPA+V+ E LG V+H YGLTE G
Sbjct: 277 GAPIILNGLVNLPAEDKHQFDHPVKVTTAGAAPPASVIAGVEKLGIEVTHVYGLTEVYGP 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW+ W+ L RA++KARQGVR L + V P T V DGQ+ GEI+ R
Sbjct: 337 VTVCAWREAWDELPLEARAKIKARQGVRYHMLEALCVADPLTMEPVPKDGQTMGEILMRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ E + + + W++TGD+ V H DGY+EIKDRSKD+IISGGENIS+ EV
Sbjct: 397 NNVMKGYLKNPEATEQAL-EGGWYHTGDLAVWHPDGYIEIKDRSKDIIISGGENISTIEV 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E +Y +PA+ E A+VA+ D+ WG+ PCAFV LK + TE II CR L Y
Sbjct: 456 EDAIYGHPAVEEAAVVAKPDEKWGETPCAFVKLKVGYGEV-TEADIIAHCREHLAGYKVP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K+VI ELPKT+TGKIQKFVLRE
Sbjct: 515 KTVIF-SELPKTSTGKIQKFVLRE 537
>gi|330505036|ref|YP_004381905.1| acyl-CoA synthetase [Pseudomonas mendocina NK-01]
gi|328919322|gb|AEB60153.1| acyl-CoA synthetase [Pseudomonas mendocina NK-01]
Length = 539
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 197/449 (43%), Positives = 281/449 (62%), Gaps = 25/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L H E+K++ D + + AA+ + L P L+ D
Sbjct: 101 RLDAEAIAFMLQHGEAKVVIADREFFDVIHAAIGM------LDHPPLVIDVDDPEYGEGQ 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G P F W P EW ++LNYTSGTT +PKGVV+ HRG F+ + +
Sbjct: 155 AVSDLDYEAFLAEGDPEFAWQWPTDEWQAISLNYTSGTTGNPKGVVYHHRGAFLNAMGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ VTH+C
Sbjct: 215 MTWNMGNHPVYLWTLPMFHCNGWCYPWTITALAGVHVFLRRVDPAKILTLIRDEQVTHLC 274
Query: 172 GALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P + +D PVK + +GA+PPA V+ E +G V+H YGLTE G
Sbjct: 275 GAPIVLNALVNMPAEAKAAIDHPVKAMVAGAAPPAKVIGAVEEMGIAVTHVYGLTEVYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW ++W+ L ERA +KARQGVR L + V P+T V DGQ+ GEI R
Sbjct: 335 VTLCAWHAEWDELPLEERATIKARQGVRYPTLEGVMVADPKTLEPVPRDGQTIGEIFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ ++ + WF+TGD+GV H+DGY+EI+DR KD+IISGGENIS+ EV
Sbjct: 395 NTVMKGYLKNPSATAEAF-EGGWFHTGDLGVCHADGYVEIRDRLKDIIISGGENISTIEV 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ E A+VA+ D+ WG+ PCAF++LK ++ ++ I+ FCR L +
Sbjct: 454 EGVLYRHPAVLEAAVVARPDEKWGETPCAFITLK--TGQQASDSEIMTFCREHLAGFKVP 511
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K+V+ +LPKT+TGKIQKFVLR++ A+
Sbjct: 512 KTVVF-TQLPKTSTGKIQKFVLRDMAKAL 539
>gi|163796330|ref|ZP_02190291.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [alpha
proteobacterium BAL199]
gi|159178472|gb|EDP63014.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [alpha
proteobacterium BAL199]
Length = 539
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/442 (45%), Positives = 276/442 (62%), Gaps = 21/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+ +L D + +P AAL+ T V+ DD +
Sbjct: 101 RLDAEALAFMLDHGEASILLTDTEFAPTIEAALA----RTTRKLTVIDVDDSEGPGGKRL 156
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P+++ V+P EWD +ALNYTSGTT PKGVV+ HRG ++ + +++
Sbjct: 157 GETDYESFLASGDPDYRGVRPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNALGNVLV 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + PV+LWTLPMFH NGW + W + A GT++CLRKV+ IY GVTH+CGA
Sbjct: 217 WGMKMHPVYLWTLPMFHCNGWCFPWTITAQAGTHVCLRKVEAKAIYDTFADEGVTHLCGA 276
Query: 174 LVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V++ML ++P + P V+++T+ ++PPAAVL E LG V+H YGLTE G V
Sbjct: 277 PIVMSMLLNAPDEARREFPQKVQMMTAASAPPAAVLEGMERLGIEVTHVYGLTEVYGPAV 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +W+ E+A LK+RQGVR L + V +P+T V D + GE+ R
Sbjct: 337 VCAWHEEWSGRPIEEQADLKSRQGVRYPVLEGLMVANPDTMEPVPADATTMGEVFMRGNI 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + +D WF++GD+GVVH DGY+E+KDRSKD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPNATDKAFKDG-WFHSGDLGVVHPDGYVELKDRSKDIIISGGENISTIEVEG 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PAI E A+VA+ D+ WG+ PCAFV+L+ K T E +I FCR L + K+
Sbjct: 456 VLYRHPAILEAAVVAKPDEKWGETPCAFVTLR--PGKTTTPEEVIAFCRQHLASFKCPKT 513
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGK+QKFVLRE
Sbjct: 514 VVF-GELPKTSTGKVQKFVLRE 534
>gi|392382561|ref|YP_005031758.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
gi|356877526|emb|CCC98366.1| putative AMP-binding enzyme [Azospirillum brasilense Sp245]
Length = 544
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/442 (45%), Positives = 275/442 (62%), Gaps = 18/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V+ +L H+ES+L VD S +A AAL T P+ V I D + + P
Sbjct: 103 RLDPPAVAFILEHAESRLFLVDRGLSAVARAALERM---TAPPRVVWIDDPAAQDADPVG 159
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P W +PE EW+ +ALNYTSGTT +PKGV++ HRG + + ++I +
Sbjct: 160 DLEYEDFLKTGDPEAPWRRPEDEWESIALNYTSGTTGNPKGVLYHHRGAHLNALGNVITF 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ V+LWTLPMFH NGW+Y W + AVG T++CLR VD I+ +I VTH+CGA
Sbjct: 220 GLRPDSVYLWTLPMFHCNGWTYPWAVTAVGATHVCLRAVDPAAIFRLIAEEKVTHLCGAP 279
Query: 175 VVLNMLSSSPST--KPLDR-PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VVL ML +P + D PV++ T GA+PP+AV+ E +GF ++H YG+TE G
Sbjct: 280 VVLTMLIHAPDAVKRAFDHGPVQVATGGAAPPSAVIAGMERMGFRLTHLYGMTECYGPST 339
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW+ W L ERA ARQGV + +++ V+ P+TG V DG++ GE+ R +
Sbjct: 340 GCAWQEAWAELPLEERAVKMARQGVPNVTMSEQTVLDPDTGREVPADGETLGELALRGNT 399
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + +RD W +TGD+ V+H D Y+EIKDR+KD+IISGGENI+S EVE
Sbjct: 400 VMKGYLKNPAATDEALRDG-WLHTGDLAVLHPDRYVEIKDRAKDIIISGGENIASLEVEE 458
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P + E A+VA+ D WG+ PCAFV+LK + +E +I +CR L H+ ++
Sbjct: 459 VLYKHPHVMEAAVVARPDAKWGETPCAFVTLKPGSEGRVSEAEVIGWCRDHLAHFKTPRT 518
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ LPKT+TGKIQKFVLRE
Sbjct: 519 VVF-GALPKTSTGKIQKFVLRE 539
>gi|395443704|ref|YP_006383957.1| acyl-CoA synthetase [Pseudomonas putida ND6]
gi|388557701|gb|AFK66842.1| acyl-CoA synthetase [Pseudomonas putida ND6]
Length = 540
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/448 (44%), Positives = 283/448 (63%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AL+L P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHAVIEGALALLEH----PPLVVDVDDPEYGEGRAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 157 SQLDYEALLNEGDPEFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + ++PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD I ++I+ H V+H+CGA
Sbjct: 217 WAMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + ++ PV+ + +GA+PPA V+ E +G V+H+YGLTE G V
Sbjct: 277 PIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEEMGIKVTHTYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +W+TL+ ERAR+K+RQGVR L + V P+T V DG + GEI R +
Sbjct: 337 VCAWHDEWDTLSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGNTLGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ R WF+TGD+ V H+DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPEATAEAFR-GGWFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D+ WG+ PCAFV+LK ++ T EA I +CR L + K
Sbjct: 456 ALYKHPAVLEAAVVARPDEKWGETPCAFVALK--PGREDTREADITSWCREHLAGFKVPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
+V+ ELPKT+TGKIQK+VLR+ A+
Sbjct: 514 TVVF-GELPKTSTGKIQKYVLRDRAKAL 540
>gi|242095652|ref|XP_002438316.1| hypothetical protein SORBIDRAFT_10g012080 [Sorghum bicolor]
gi|241916539|gb|EER89683.1| hypothetical protein SORBIDRAFT_10g012080 [Sorghum bicolor]
Length = 579
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/463 (45%), Positives = 291/463 (62%), Gaps = 31/463 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD SVLL HSE+K++FVDY +A ALSL P V++ ++ SSP
Sbjct: 103 RLDATMASVLLQHSEAKVIFVDYALLDVAKKALSLVSKTGAKPPLVVLIKELLNESSPPD 162
Query: 63 ----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
G P+F+ P E +P+ALNYTSGTTS PKGVV+ HRG ++
Sbjct: 163 DGSQAFHHYEYEALISKDGSPDFRIRWPADENEPLALNYTSGTTSRPKGVVYTHRGAYLN 222
Query: 107 TVSSLI--DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+++++I + + PV+LWT+PMFH NGW WG+AA GGTN+CLRKV ++ I
Sbjct: 223 SIATVIMNEMAVGTPPVYLWTVPMFHCNGWCLVWGVAATGGTNVCLRKVTAAAVFDGIAR 282
Query: 165 HGVTHICGALVVLNML--SSSPSTKPL------DRPVKILTSGASPPAAVLLRTESLGFV 216
H VTH+ GA VL+M+ +++ +PL +RPV + GA PP VLLR E+LGF+
Sbjct: 283 HRVTHMGGAPTVLSMIVNATAEERRPLPLPSRRERPVIVKAGGAPPPPQVLLRMEALGFL 342
Query: 217 VSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVK 276
V H YG+TET G CAWK +W+ L +RA L+ARQG+ +GL ++DV P T SV
Sbjct: 343 VIHGYGMTETYGPATFCAWKPEWDALPPEQRASLRARQGLHHLGL-EVDVKDPVTMRSVP 401
Query: 277 HDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDV 336
DG++ GEI+ R ++ GY KD ++ W +GD+ V H DGY++I DRSKD+
Sbjct: 402 ADGRTMGEIMLRGNTVTSGYYKDAA-ATAEALAGGWLRSGDLAVRHRDGYVKIMDRSKDI 460
Query: 337 IISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAII 396
IISGGENIS+ EVE+ L+ +PA+ E A+VA+ D++WG+ PCAFV+L+ + + EE +I
Sbjct: 461 IISGGENISTIEVEAALFAHPAVAEAAVVARPDEYWGETPCAFVTLR-DGTDAVGEEDVI 519
Query: 397 EFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
FCRARLP YM ++V+ ELPKTATGK+QK +LR A+
Sbjct: 520 AFCRARLPRYMVPRTVVFVPELPKTATGKVQKVLLRNQAKAMG 562
>gi|83945302|ref|ZP_00957651.1| acyl-CoA synthase [Oceanicaulis sp. HTCC2633]
gi|83851472|gb|EAP89328.1| acyl-CoA synthase [Oceanicaulis sp. HTCC2633]
Length = 538
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/443 (46%), Positives = 281/443 (63%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ +L H E+K++ VD + S + A+ I KP+++ DD A
Sbjct: 99 RLDAEAIAFILKHGEAKVILVDREFSSVIARAV-----QEIDAKPLIVDIDDPLAEHGEL 153
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P F + + E EWD +ALNYTSGTT PKGVV HRG ++ V + +
Sbjct: 154 IGEIEYEAFLKEGDPGFDFHRAEDEWDAIALNYTSGTTGDPKGVVTHHRGAYLNAVGNAM 213
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W +P+ PV+LWTLPMFH NGW + W +AA G N+CLR+V+ I S I H VTH+CG
Sbjct: 214 EWDMPHFPVYLWTLPMFHCNGWCFPWTLAAKAGVNVCLRRVEPFAILSAIAEHKVTHLCG 273
Query: 173 ALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V++M+ P + D PV ++T+GASPPA V+ E++G V+H+YGLTE G
Sbjct: 274 APIVMSMMIQLPEKERPDFDHPVAMMTAGASPPATVIAGMEAMGVTVTHTYGLTEVYGPS 333
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
++CAWK +W+ L +RARLKARQG+ I D+ V +PET + DG+S GEI+ R
Sbjct: 334 IACAWKPEWDELPLKDRARLKARQGLPYITQEDLMVANPETMEPLPWDGKSLGEIMIRGN 393
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + + WF+TGD+ V H DG++EIKDRSKD+IISGGENISS EVE
Sbjct: 394 AVMKGYLKNPATTQKSFK-GGWFHTGDLAVTHPDGHVEIKDRSKDIIISGGENISSVEVE 452
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P + A+VA+ D WG+ PCAF+ LK T++ II F R L H+ A +
Sbjct: 453 DVLYSHPDVAAAAVVAKPDAKWGETPCAFIELK--TGANVTDKDIIAFAREHLAHFKAPR 510
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V+ ELPKTATGKIQKF+LRE
Sbjct: 511 LVVF-GELPKTATGKIQKFMLRE 532
>gi|409427828|ref|ZP_11262317.1| acyl-CoA synthetase [Pseudomonas sp. HYS]
Length = 540
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 278/447 (62%), Gaps = 20/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AAL+L P V+ DD V
Sbjct: 101 RLDAEAIAFMLEHGEAKVLITDREFHKVVEAALALMK----YPPLVIDVDDPEYGEGQAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W PE EW ++LNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 157 SDLDYEAFLAEGDPAFAWHWPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + N PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD I ++I+ H V+H+CGA
Sbjct: 217 WAMGNHPVYLWTLPMFHCNGWCYPWTVTALAGTHVFLRRVDPQKILTLIREHQVSHLCGA 276
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 PIVLNALINMPDSAKAAIDHPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW ++W+ ERAR+K+RQGVR L + V P+T V+ DG + GEI R +
Sbjct: 337 VCAWHAEWDEQPLAERARIKSRQGVRYPTLEGLMVADPQTLEPVQRDGNTLGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ R WF+TGD+ V H+DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPEATAEAFR-GGWFHTGDLAVWHADGYVEIKDRLKDIIISGGENISTIEVED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
LY +PA+ E A+VA+ D+ WG+ PCA+++LK + E II FCR L + K+
Sbjct: 456 TLYKHPAVLEAAVVARPDEKWGETPCAYITLK-AGCEGTREAEIIAFCREHLAGFKLPKT 514
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
V+ ELPKT+TGKIQK++LR+ A+
Sbjct: 515 VVF-SELPKTSTGKIQKYLLRDWAKAL 540
>gi|146308832|ref|YP_001189297.1| acyl-CoA synthetase [Pseudomonas mendocina ymp]
gi|145577033|gb|ABP86565.1| AMP-dependent synthetase and ligase [Pseudomonas mendocina ymp]
Length = 539
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/447 (44%), Positives = 279/447 (62%), Gaps = 21/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K++ D + + AA+ + P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEAKVVIADREFFDVIHAAIGMLDH----PPLVIDVDDPEYGEGQAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W P EW ++LNYTSGTT +PKGVV+ HRG F+ + + +
Sbjct: 157 SELDYEAFLAEGDPEFAWQWPTDEWQAISLNYTSGTTGNPKGVVYHHRGAFLNAMGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ VTH+CGA
Sbjct: 217 WNMGNHPVYLWTLPMFHCNGWCYPWTITALAGVHVFLRRVDPAKILTLIRDEQVTHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + +D PVK + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 PIVLNALVNMPAEAKAAIDHPVKAMVAGAAPPAKVIGAVEEMGIHVTHVYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW ++W+ L +RA +KARQGVR L + V P+T V DGQ+ GEI R +
Sbjct: 337 LCAWHAEWDELPLEQRATIKARQGVRYPTLEGVMVADPKTLEPVPRDGQTIGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ ++ + WF+TGD+GV H+DGY+EI+DR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPSATAEAF-EGGWFHTGDLGVCHADGYVEIRDRLKDIIISGGENISTIEVEG 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ E A+VA+ D+ WG+ PCAF++LK ++ +E I+ FCR L + K+
Sbjct: 456 VLYRHPAVLEAAVVARPDEKWGETPCAFITLK--TGQQASETEIMTFCREHLAGFKVPKT 513
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
V+ +LPKT+TGKIQKFVLR++ A+
Sbjct: 514 VVF-TQLPKTSTGKIQKFVLRDMAKAL 539
>gi|23013752|ref|ZP_00053614.1| COG0318: Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
[Magnetospirillum magnetotacticum MS-1]
Length = 541
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 280/442 (63%), Gaps = 21/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD V+ +L+H+E+K+L D + SP+ AL+ TI PV+ DD +
Sbjct: 103 RLDADAVTFILNHAEAKILITDREFSPVVKKALAAL-GRTI---PVIDIDDPQFKGGELL 158
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G ++ W P EW +ALNYTSGTT +PKGVV+ HRG ++ VS+ +
Sbjct: 159 GEKTYEQLLDEAQSEAPWTMPSDEWQAIALNYTSGTTGNPKGVVYHHRGAYLNAVSNALS 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W++ + V+LWTLPMFH NGW + W MA V GT++CLR V V I S I+ VT+ CGA
Sbjct: 219 WQMGDGTVYLWTLPMFHCNGWCFPWTMAVVAGTSVCLRHVRVDAIMSAIRDEKVTNFCGA 278
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLNM++++P+ + + VK++T+GA+PPA V+ E +G+ V+H YGLTE G V
Sbjct: 279 PIVLNMINNAPAALKEGISHAVKVMTAGAAPPAPVIAGMERMGWEVTHVYGLTECYGPTV 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W +WN L+ E+A++KARQGVR L + + P + DG++ GEI R +
Sbjct: 339 QCVWHDKWNPLSIEEKAQIKARQGVRGPMLEGLMIADPLSLEPAPKDGKTVGEIFMRGNN 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + WF+TGD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPAATQEAFA-GGWFHTGDLAVWHPDGYVEIKDRSKDIIISGGENISSIEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
+LY +PA+ E A+VA+ D+ WG+ PCAF++LK + +E II FCR R+ H+ ++
Sbjct: 458 ILYAHPAVLEAAVVARPDEKWGETPCAFIALK--DGAEASEADIISFCRERMAHFKVPRT 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
++ LPKT+TGK+QKF+LR+
Sbjct: 516 IVF-GGLPKTSTGKVQKFMLRQ 536
>gi|429333402|ref|ZP_19214099.1| acyl-CoA synthetase [Pseudomonas putida CSV86]
gi|428761981|gb|EKX84198.1| acyl-CoA synthetase [Pseudomonas putida CSV86]
Length = 540
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/447 (44%), Positives = 275/447 (61%), Gaps = 20/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AAL L P V+ DD V
Sbjct: 101 RLDAEAIAFMLEHGEAKVLITDREFHKVIGAALQLMEH----PPLVVDVDDPEYGEGCAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W PE EW ++LNYTSGTT +PKGVV+ HRG ++ ++ + +
Sbjct: 157 SELDYEAFLAEGDPQFAWQWPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + N PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD I ++I+ H V+H+CGA
Sbjct: 217 WAMGNHPVYLWTLPMFHCNGWCYPWTVTALAGTHVFLRRVDPQKILTLIREHQVSHLCGA 276
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 PIVLNALINMPDSAKAAIDHPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW ++W+ ERAR+K+RQGVR L + V P+T V DG + GEI R +
Sbjct: 337 VCAWHAEWDEKPLQERARIKSRQGVRYATLEGLMVADPQTLEPVARDGNTLGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ R WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPEATAEAFR-GGWFHTGDLAVCHPDGYVEIKDRLKDIIISGGENISTIEVED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
LY +PA+ E A+VA+ D+ WG+ PCA++SLK E II FCR L + K+
Sbjct: 456 TLYRHPAVLEAAVVARPDEKWGETPCAWISLKPGFEDT-REAEIIAFCREHLAGFKLPKT 514
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
VI D LPKT+TGKIQK++LR+ A+
Sbjct: 515 VIFRD-LPKTSTGKIQKYLLRDWAKAL 540
>gi|359787153|ref|ZP_09290219.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
gi|359295535|gb|EHK59800.1| acyl-CoA synthetase [Halomonas sp. GFAJ-1]
Length = 543
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/444 (45%), Positives = 279/444 (62%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD + +S +L H E+K + VD + + + A++L KP++I
Sbjct: 103 RLDAEAISYMLSHGEAKAILVDPEFAGVINDAVALLDE-----KPLIIDVADVEFLGETQ 157
Query: 54 --DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
++ + G P + + P EW ++LNYTSGTT PKGVV+ HRG ++ VS++
Sbjct: 158 GIGEIEYEALLAEGDPEYAYQLPSDEWQAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNI 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
++W +P+ PV+LWTLPMFH NGW + W +AA G ++CLRKVD I +I VTH
Sbjct: 218 LEWAMPHHPVYLWTLPMFHCNGWCFPWTIAANAGVSVCLRKVDPKRINDLIVDEKVTHFS 277
Query: 172 GALVVLNMLS--SSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA ++LN L ++ + D PVK+ T+GA+PPA+V+ E LG V+H YGLTE G
Sbjct: 278 GAPIILNGLVNLAADQKREFDHPVKVTTAGAAPPASVIAGVEKLGIEVTHVYGLTEVYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW+ +WN L ERA++KARQGVR L + V P + V DGQ+ GEI+ R
Sbjct: 338 VTVCAWREEWNELPLEERAKIKARQGVRYHMLEALCVADPVSMEPVAKDGQTIGEILMRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ + ++ + + W++TGD+ V H+DGY+EIKDRSKD+IISGGENIS+ EV
Sbjct: 398 NNVMKGYLKNPDATANAL-EGGWYHTGDLAVWHADGYIEIKDRSKDIIISGGENISTIEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E +Y +PA+ E A+VA+ D+ WG+ PCAFV LK + TE II CR L Y
Sbjct: 457 EDAIYSHPAVEEAAVVAKPDEKWGETPCAFVKLKIGYGEV-TEADIIAHCREHLAGYKVP 515
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K+VI ELPKT+TGKIQKFVLRE
Sbjct: 516 KTVIF-SELPKTSTGKIQKFVLRE 538
>gi|237682462|gb|ACR10278.1| putative benzoate-CoA ligase [Brassica rapa subsp. pekinensis]
Length = 567
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/460 (43%), Positives = 283/460 (61%), Gaps = 27/460 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS----NTIL--------PKPVLI 52
RLD K ++ + H++ K+LFVD LA A L L P N ++ PK +
Sbjct: 97 RLDAKSIAAIFRHAQPKILFVDRNLETLARATLHLLPDEEQRNLLVIFIDEPDRPKRISS 156
Query: 53 HDDVSATSSPTVGHPN----FKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
+D + G P+ + + ++E DP++LNYTSGTTS PKGVV HRG+++ ++
Sbjct: 157 NDQLDYEELIRRGEPSSSSVARMFRIQNEHDPISLNYTSGTTSEPKGVVVSHRGVYLSSL 216
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
S ++ W + PV+LWTLPMFH NGW+ +W +AA GGTN+C+R V P IY I+ HGVT
Sbjct: 217 SVIMGWEMGKFPVYLWTLPMFHCNGWNLTWSVAARGGTNVCIRHVSAPEIYKNIESHGVT 276
Query: 169 HICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+C VLN+L +S +PV++LT G+SPP A++ + + LGF V H YGLTE
Sbjct: 277 HMCCVPTVLNILLQGNSLDMSQRSKPVQVLTGGSSPPTALVEKVQRLGFEVLHVYGLTEA 336
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G V+ C W +WN L + ++ +KARQGV + LAD+DV + +T SV DG + GEIV
Sbjct: 337 TGAVLFCEWHDEWNRLPEKQQMEMKARQGVGILALADVDVKNKKTQESVPRDGTTMGEIV 396
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+ SIM GYL++ + +S + + W +TGDIGV+H DG+++IKDRSKD+IISGGENI+S
Sbjct: 397 MKGSSIMKGYLRNPKATSEAFK-HGWLHTGDIGVIHPDGHIQIKDRSKDIIISGGENINS 455
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKK--------PTEEAIIEF 398
EVE+VLY + E A+VA WG+ PCAFV L+ + + E +I++
Sbjct: 456 IEVENVLYKYKKVLEAAVVAMPHPMWGETPCAFVVLEKRKTGQGDCDDQFMTREGDLIKY 515
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
CR LPH+M K V+ ELPK GKI K LR I ++
Sbjct: 516 CRENLPHFMCPKRVVFMGELPKNGNGKILKHKLRNIAKSL 555
>gi|22758280|gb|AAN05508.1| Putative AMP-binding protein [Oryza sativa Japonica Group]
Length = 561
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/448 (47%), Positives = 282/448 (62%), Gaps = 17/448 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHDDVSATSSPT 63
R D VSVLL HSE+K+ V+ Q +A AL L + P + I D ++SS
Sbjct: 108 RHDAAMVSVLLRHSEAKVFLVESQFLAVAHDALRLLADAKAKFPLVIAISDTGDSSSSDG 167
Query: 64 V----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
F+ P E DP++LNYTSGTTS PKGV++ HRG ++ ++++L+
Sbjct: 168 GGLEYEALLRDAPRGFEIRWPADERDPISLNYTSGTTSRPKGVIYSHRGAYLNSLAALLC 227
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + PV+LWT+PMFH NGW +W AA GGTNIC+R V +I+ I HGVT++ GA
Sbjct: 228 NDMTSMPVYLWTVPMFHCNGWCMAWATAAQGGTNICVRNVVPKVIFEQIVRHGVTNMGGA 287
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VLNM+ ++P++ +PL R V I T GA PP VL + E LGF V H YGLTET G
Sbjct: 288 PTVLNMIVNAPASERRPLPRRVLISTGGAPPPPQVLAKMEELGFNVQHGYGLTETYGPAT 347
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+ +W+ L ERAR+KA QGV+ L D+D+ P T SV DG++ GE++ R +
Sbjct: 348 RCVWRPEWDALPLAERARIKALQGVQHQMLQDVDIKDPVTMASVPSDGRAVGEVMLRGNT 407
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GY KD + MR W TGD+GV H DGY+++KDR+KD+IISGGENISS EVES
Sbjct: 408 VMSGYYKDAAATEEAMR-GGWLRTGDLGVRHPDGYIQLKDRAKDIIISGGENISSIEVES 466
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VL+ + A+ + A+VA+ D WG+ CAFV+LK S T II FCRARLP YMA ++
Sbjct: 467 VLFGHHAVLDAAVVARPDDHWGETACAFVTLKDGASA--TAHEIIAFCRARLPRYMAPRT 524
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAVN 439
V+ D LPKT+TGK QKF+LRE A+
Sbjct: 525 VVFGD-LPKTSTGKTQKFLLREKARAMG 551
>gi|297834588|ref|XP_002885176.1| acyl-activating enzyme 7 [Arabidopsis lyrata subsp. lyrata]
gi|297331016|gb|EFH61435.1| acyl-activating enzyme 7 [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/458 (44%), Positives = 281/458 (61%), Gaps = 37/458 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF--PSNTILPKPVLI---------- 52
RL+ + V+ LL HS+S ++ VD + LA +L L + + +P+LI
Sbjct: 108 RLNAQTVAFLLSHSQSSVIMVDQELFTLAEESLRLMEEKAGSSFKRPLLIVIGDQTCPPE 167
Query: 53 ------------HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCH 100
++D AT G PN+ W P EW +AL YTSGTT+SPKGVV H
Sbjct: 168 SLNIALSKGAVEYEDFLAT-----GDPNYPWQPPADEWQSIALGYTSGTTASPKGVVLHH 222
Query: 101 RGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYS 160
RG +++ +S+ + W + V+LWTLPMFH NGW + W +A + GT+ICLR+V +YS
Sbjct: 223 RGAYVMALSNPLIWGMQEGCVYLWTLPMFHCNGWCFPWSLAVLSGTSICLRQVSAKEVYS 282
Query: 161 VIKHHGVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVV 217
I + VTH C A VVLN + ++P PL V ++T+GA+PP +VL GF V
Sbjct: 283 KIVKYKVTHFCAAPVVLNTIVNAPKEDTILPLPHTVHVMTAGAAPPPSVLFSMNQKGFRV 342
Query: 218 SHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKH 277
+H+YGL+ET G CAWK +W++L +A+L ARQGVR G+ +DV+ +TG V
Sbjct: 343 AHTYGLSETYGPSTVCAWKPEWDSLPPEAQAKLNARQGVRYTGMEQLDVIDTQTGKPVPA 402
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
DG++ GEIVFR +M GYLK+ E + WF++GDI V H D Y+EIKDRSKDVI
Sbjct: 403 DGKTAGEIVFRGNMVMKGYLKNPEANKETFA-GGWFHSGDIAVKHPDNYIEIKDRSKDVI 461
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKK---PTEEA 394
ISGGENISS EVE+V+Y +PA+ E ++VA+ D+ W + PCAFV+LK K+ +
Sbjct: 462 ISGGENISSVEVENVVYHHPAVLEASVVARPDERWQESPCAFVTLKSGYEKQDHNKLAQD 521
Query: 395 IIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
I+ FCR +LP Y KSV+ LPKTATGKIQK +LR
Sbjct: 522 IMRFCREKLPAYWVPKSVVF-GPLPKTATGKIQKHILR 558
>gi|115450551|ref|NP_001048876.1| Os03g0133500 [Oryza sativa Japonica Group]
gi|108706039|gb|ABF93834.1| AMP-dependent synthetase and ligase family protein, putative,
expressed [Oryza sativa Japonica Group]
gi|113547347|dbj|BAF10790.1| Os03g0133500 [Oryza sativa Japonica Group]
gi|215694765|dbj|BAG89956.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218192027|gb|EEC74454.1| hypothetical protein OsI_09874 [Oryza sativa Indica Group]
Length = 550
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/448 (47%), Positives = 282/448 (62%), Gaps = 17/448 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHDDVSATSSPT 63
R D VSVLL HSE+K+ V+ Q +A AL L + P + I D ++SS
Sbjct: 97 RHDAAMVSVLLRHSEAKVFLVESQFLAVAHDALRLLADAKAKFPLVIAISDTGDSSSSDG 156
Query: 64 V----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
F+ P E DP++LNYTSGTTS PKGV++ HRG ++ ++++L+
Sbjct: 157 GGLEYEALLRDAPRGFEIRWPADERDPISLNYTSGTTSRPKGVIYSHRGAYLNSLAALLC 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + PV+LWT+PMFH NGW +W AA GGTNIC+R V +I+ I HGVT++ GA
Sbjct: 217 NDMTSMPVYLWTVPMFHCNGWCMAWATAAQGGTNICVRNVVPKVIFEQIVRHGVTNMGGA 276
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VLNM+ ++P++ +PL R V I T GA PP VL + E LGF V H YGLTET G
Sbjct: 277 PTVLNMIVNAPASERRPLPRRVLISTGGAPPPPQVLAKMEELGFNVQHGYGLTETYGPAT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+ +W+ L ERAR+KA QGV+ L D+D+ P T SV DG++ GE++ R +
Sbjct: 337 RCVWRPEWDALPLAERARIKALQGVQHQMLQDVDIKDPVTMASVPSDGRAVGEVMLRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GY KD + MR W TGD+GV H DGY+++KDR+KD+IISGGENISS EVES
Sbjct: 397 VMSGYYKDAAATEEAMR-GGWLRTGDLGVRHPDGYIQLKDRAKDIIISGGENISSIEVES 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VL+ + A+ + A+VA+ D WG+ CAFV+LK S T II FCRARLP YMA ++
Sbjct: 456 VLFGHHAVLDAAVVARPDDHWGETACAFVTLKDGASA--TAHEIIAFCRARLPRYMAPRT 513
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAVN 439
V+ D LPKT+TGK QKF+LRE A+
Sbjct: 514 VVFGD-LPKTSTGKTQKFLLREKARAMG 540
>gi|29893229|gb|AAP03023.1| acyl-activating enzyme 12 [Arabidopsis thaliana]
Length = 578
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/461 (44%), Positives = 284/461 (61%), Gaps = 29/461 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS---NTILPKPVLIHD-----DV 56
RLD ++ +L H++ K+LF+D PLA L L S N LP + IH+ V
Sbjct: 97 RLDATSIAAILRHAKPKILFIDRSFEPLAREILQLLSSEDSNLNLPV-IFIHEIDFPKRV 155
Query: 57 SATSSP-----TVGHPN----FKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
S+ S G P + + E DP++LNYTSGTT+ PKGVV HRG ++ T
Sbjct: 156 SSEESDYECLIQRGEPTPSLLARMFCIQDEHDPISLNYTSGTTADPKGVVISHRGAYLST 215
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+S++I W + PV+LWTLPMFH NGW+++WG AA GGT++C+R V P IY I+ H V
Sbjct: 216 LSAIIGWEMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNV 275
Query: 168 THICGALVVLNMLSSSPSTKPLDR--PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
TH+C V N+L S R PV +LT G+ PPAA++ + + LGF V H+YGLTE
Sbjct: 276 THMCCVPTVFNILLKGNSLDLSHRSGPVHVLTGGSPPPAALVKKVQRLGFQVMHAYGLTE 335
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
G V+ C W+ +WN L + ++ LKARQG+ +GL ++DV + ET SV DG++ GEI
Sbjct: 336 ATGPVLFCEWQDEWNRLPENQQMELKARQGLSILGLTEVDVRNKETQESVPRDGKTMGEI 395
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
V + SIM GYLK+ + + + + W +GD+GV+H DG++EIKDRSKD+IISGGENIS
Sbjct: 396 VMKGSSIMKGYLKNPKATYEAFK-HGWLNSGDVGVIHPDGHVEIKDRSKDIIISGGENIS 454
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL-KWELSKKPTEEA-------IIE 397
S EVE+++Y P + E A+VA WG+ PCAFV L K E + + E+ +IE
Sbjct: 455 SVEVENIIYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETNNEDREDKLVTKERDLIE 514
Query: 398 FCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+CR LPH+M + V+ DELPK GKI K LR+I +
Sbjct: 515 YCRENLPHFMCPRKVVFLDELPKNGNGKILKPKLRDIAKGL 555
>gi|380042378|gb|AFD33353.1| acyl-activating enzyme 9 [Cannabis sativa]
Length = 561
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/454 (45%), Positives = 284/454 (62%), Gaps = 30/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-----HDDVSAT 59
R D VSVLL HSE+K+ FVDYQ +A A+ + P P+L+ DD +T
Sbjct: 97 RHDSAMVSVLLRHSEAKVFFVDYQFLHIAQGAIDMLSKKGSKP-PLLVLIPECDDDQLST 155
Query: 60 SSP------------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHR 101
+ G+ +F+ + P+ EWDP++LNYTSGTTSSPKGV++ HR
Sbjct: 156 DISSSSNAISASVKLEYEQLLSTGNLDFEVIIPKDEWDPISLNYTSGTTSSPKGVIYSHR 215
Query: 102 GLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSV 161
G ++ +++ ++ + + V+LW +PMFH NGW WG+AA GGTN+CLR V I+
Sbjct: 216 GAYLNSLAGVLLNEMHSMVVYLWCVPMFHCNGWCLPWGIAAQGGTNVCLRNVTAKGIFDS 275
Query: 162 IKHHGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSH 219
I H VTH+ GA VLNM+ ++ +T KPL V I+T A PP ++L + E +GF V+H
Sbjct: 276 IAKHKVTHMGGAPTVLNMIINASATERKPLPSKVSIMTGAAPPPPSLLFKMEEMGFNVTH 335
Query: 220 SYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDG 279
SYGLTET G C WK +W++L +A+LK+RQGV+ +G+ ++DV P T SV +
Sbjct: 336 SYGLTETYGPGTVCTWKPEWDSLPRDAQAKLKSRQGVQHLGIEELDVKDPVTLKSVPANA 395
Query: 280 QSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIIS 339
+ GE++FR +M GYLK+ + + D WF TGD+GV H DGY+E+KDRSKD+II
Sbjct: 396 KIIGEVMFRGNPVMNGYLKNVKATQEAF-DGGWFRTGDLGVKHPDGYVELKDRSKDIIIF 454
Query: 340 GGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFC 399
GGENIS EVE VLY PA+ E A+V + D WG+ PCAFV++K + E I FC
Sbjct: 455 GGENISPIEVEFVLYSPPAVFEAAVVPRPDDPWGETPCAFVNVKRGCNVGGDE--IFNFC 512
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
R+ LPHYMA ++V +D LPKT +GK QKFV R+
Sbjct: 513 RSCLPHYMAPRTVFFQD-LPKTFSGKGQKFVFRD 545
>gi|115436398|ref|NP_001042957.1| Os01g0342900 [Oryza sativa Japonica Group]
gi|21104706|dbj|BAB93295.1| putative adenosine monophosphate binding protein 1 AMPBP1 [Oryza
sativa Japonica Group]
gi|113532488|dbj|BAF04871.1| Os01g0342900 [Oryza sativa Japonica Group]
Length = 597
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 205/470 (43%), Positives = 283/470 (60%), Gaps = 36/470 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHD--DVSATSS 61
RLD +VLL HSE+K++FVD +A AL L + P VLI + D + S
Sbjct: 104 RLDAAMAAVLLRHSEAKVVFVDRALLGVAQKALVLVAEAGARRPVLVLISELLDENERSP 163
Query: 62 PTV---------------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCH 100
P P+F P E +P+ALNYTSGTTS PKGV++ H
Sbjct: 164 PDAKIKVTRVDYEYEHLLSAAAAGSSPDFAIRWPADENEPIALNYTSGTTSRPKGVIYSH 223
Query: 101 RGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYS 160
RG ++ +++++I + PV+LWT+PMFH NGW WG+AA GGTN+C+R+V I+
Sbjct: 224 RGAYLSSLAAVIVNAMAETPVYLWTVPMFHCNGWCQVWGVAAQGGTNVCVRRVTAAAIFD 283
Query: 161 VIKHHGVTHICGALVVLNMLSSSPSTK------PLDRPVKILTSGASPPAAVLLRTESLG 214
+ HGVTH+ GA VL+M+ ++ + + R V ++T GA PP VL R E G
Sbjct: 284 SVARHGVTHMGGAPTVLSMIVNATADERRRQPGGRRRRVTVMTGGAPPPPQVLFRMEEQG 343
Query: 215 FVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMS 274
F+V HSYGLTET G C WK +W+ L ERAR+K+RQG+ +GL DV P T S
Sbjct: 344 FLVIHSYGLTETYGPATVCTWKPEWDALTAEERARIKSRQGLHHVGLEAADVKDPATMRS 403
Query: 275 VKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSK 334
V DG++ GE++ R ++M GY KD G++ W +GD+ V DGY++I DRSK
Sbjct: 404 VPADGRTVGEVMLRGNTVMSGYYKDG-GATAEALAGGWLRSGDLAVREEDGYIKILDRSK 462
Query: 335 DVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK----WELSKKP 390
D+IISGGENIS+ EVE+ L+ +PA+ E A+V + D++WG+ PCAFV L+
Sbjct: 463 DIIISGGENISTVEVEAALFGHPAVEEAAVVGRPDEYWGETPCAFVKLRGGGGGGGGGAA 522
Query: 391 TEEAIIEFCRARLPHYMAHKS-VIIEDELPKTATGKIQKFVLREIVNAVN 439
EE ++ FCRARLP YMA ++ V++E+ELPKTATGK+QK LRE A+
Sbjct: 523 VEEELMAFCRARLPRYMAPRTVVVVEEELPKTATGKVQKVALRERAKAMG 572
>gi|40062515|gb|AAR37460.1| AMP-binding family protein [uncultured marine bacterium 106]
Length = 493
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 279/442 (63%), Gaps = 21/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
R++ + ++ + H+E+K+L D +SSP ALS + + V+ DD S +
Sbjct: 55 RMEAETLANIFEHAETKVLLTDRESSPQIKVALSKVKRDIL----VIDIDDPETDSGEYL 110
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F+ V PE +W ++LNYTSGTT PKGVV+ RG +++ +++
Sbjct: 111 GMLEYEAFLSEGDPKFEAVLPEDDWQAVSLNYTSGTTGIPKGVVYHTRGAYLLATGNVLA 170
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P++PV+LWTLPMFH NGW + W + +GGT++CLRKV IY+ I H VTH CGA
Sbjct: 171 WEMPHRPVYLWTLPMFHCNGWCFPWTITMLGGTHVCLRKVTAKNIYNSIAEHHVTHFCGA 230
Query: 174 LVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V+NM+S++P + + P V+I+T+ A PP V+ + E GF V+H YGLTE G V
Sbjct: 231 PIVMNMISNAPKEEQRELPHRVEIMTAAAPPPPTVIAQMEEAGFNVTHVYGLTEVYGPAV 290
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+ WN T +A+LK RQGVR L + V +PET V DG++ GE++ +
Sbjct: 291 VCEWQEAWNEKDKTTQAQLKGRQGVRYHVLEGLTVANPETLEPVPADGETMGEVLMQGNI 350
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GY K+ + ++ WF++GDIGV+H DGY+E+KDRSKD+IISGGENISS E+E+
Sbjct: 351 VMKGYFKNPKATAQAFA-GGWFHSGDIGVIHPDGYIELKDRSKDIIISGGENISSVEIEN 409
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY I E A+VA+ D+ WG+ P AFVSLK S E+ +IEFCR +LP Y K
Sbjct: 410 VLYQQEDILEAAVVARPDEKWGEVPFAFVSLKTGCSL--NEQKVIEFCRTKLPGYKIPKY 467
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGKI+K +LRE
Sbjct: 468 VVF-CELPKTSTGKIRKSILRE 488
>gi|83311730|ref|YP_421994.1| Acyl-CoA synthetase/AMP-acid ligase II [Magnetospirillum magneticum
AMB-1]
gi|82946571|dbj|BAE51435.1| Acyl-CoA synthetase/AMP-acid ligase II [Magnetospirillum magneticum
AMB-1]
Length = 541
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/442 (44%), Positives = 280/442 (63%), Gaps = 21/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L+H+E+K+L D + SP+ AL+ TI PV+ DD +
Sbjct: 103 RLDADAITFILNHAEAKILITDREFSPVVKKALAAL-GRTI---PVIDIDDPQFKGGELL 158
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G N++ W P EW +ALNYTSGTT +PKGVV+ HRG + VS+ +
Sbjct: 159 GEKNYEQLLDEAASEAPWTLPTDEWQAIALNYTSGTTGNPKGVVYHHRGAHLNAVSNALS 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W++ + V+LWTLPMFH NGW + W MA V GT++CLR V V I I+ VT+ CGA
Sbjct: 219 WQMGDNTVYLWTLPMFHCNGWCFPWTMAVVAGTSVCLRHVRVDAIMGAIRDEKVTNFCGA 278
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLNM++++P+ + + VK++T+GA+PPA V+ E +G+ V+H YGLTE G V
Sbjct: 279 PIVLNMINNAPAALKEGISHAVKVMTAGAAPPAPVIAGMERMGWEVTHVYGLTECYGPTV 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W +WN L+ E+A++KARQGVR L + + P + DG++ GEI R +
Sbjct: 339 QCVWHDKWNGLSIDEKAQIKARQGVRGPMLEGLMIADPISLEPAPKDGKTVGEIFMRGNN 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+++ + WF+TGD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNEKATEEAFA-GGWFHTGDLAVCHPDGYIEIKDRSKDIIISGGENISSIEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
+LY + A+ E A+VA+ D+ WG+ PCAF++LK + TE II FCR R+ H+ ++
Sbjct: 458 ILYAHLAVLEAAVVARPDEKWGETPCAFIALK--DGAEATEADIITFCRERMAHFKVPRT 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
++ LPKT+TGK+QKF+LR+
Sbjct: 516 IVF-GGLPKTSTGKVQKFMLRQ 536
>gi|148547442|ref|YP_001267544.1| acyl-CoA synthetase [Pseudomonas putida F1]
gi|397695070|ref|YP_006532951.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|421521612|ref|ZP_15968264.1| acyl-CoA synthetase [Pseudomonas putida LS46]
gi|148511500|gb|ABQ78360.1| AMP-dependent synthetase and ligase [Pseudomonas putida F1]
gi|397331800|gb|AFO48159.1| acyl-CoA synthetase [Pseudomonas putida DOT-T1E]
gi|402754527|gb|EJX15009.1| acyl-CoA synthetase [Pseudomonas putida LS46]
Length = 540
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 282/448 (62%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AL+L P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHAVIEGALALLEH----PPLVVDVDDPEYGEGRAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 157 SQLDYEALLNEGDPEFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + ++PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD I ++I+ H V+H+CGA
Sbjct: 217 WAMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + ++ PV+ + +GA+PPA V+ E +G V+H+YGLTE G V
Sbjct: 277 PIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEEMGIKVTHTYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +W+ L+ ERAR+K+RQGVR L + V P+T V DG + GEI R +
Sbjct: 337 VCAWHDEWDALSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGNTLGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ R WF+TGD+ V H+DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPEATAEAFR-GGWFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D+ WG+ PCAFV+LK ++ T EA I +CR L + K
Sbjct: 456 ALYKHPAVLEAAVVARPDEKWGETPCAFVALK--PGREDTREADITSWCREHLAGFKVPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
+V+ ELPKT+TGKIQK+VLR+ A+
Sbjct: 514 TVVF-GELPKTSTGKIQKYVLRDRAKAL 540
>gi|239820865|ref|YP_002948050.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
gi|239805718|gb|ACS22784.1| AMP-dependent synthetase and ligase [Variovorax paradoxus S110]
Length = 550
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/437 (44%), Positives = 265/437 (60%), Gaps = 10/437 (2%)
Query: 4 QRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF--PSNTI-----LPKPVLIHDDV 56
RLD + ++ +L H E KLL VD + + AAL L P I L P +
Sbjct: 102 HRLDPEGIAFILRHGECKLLMVDREFAATVAAALELLDNPPAVIDIEDHLAPPGERIGET 161
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
S G P F P EW P+ALNYTSGTT PKGVV HRG +++++ + +W +
Sbjct: 162 DYESLLASGDPAFPGRWPSDEWQPIALNYTSGTTGDPKGVVASHRGTYLMSLLQITNWAM 221
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P P +LWTLPMFH NGW ++W + A GT++CLR+V + I H V H+C A VV
Sbjct: 222 PRAPKYLWTLPMFHANGWCFTWAVTAAAGTHVCLRRVSAEAVLEAIDTHQVDHLCAAPVV 281
Query: 177 LNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
+ MLS S L R V++LT+G+ PP AVL ++GF V H +G+TE G VSCAW+
Sbjct: 282 MAMLSDSAQNIRLSRSVRVLTAGSPPPLAVLNAVLAMGFDVEHVFGITEVCGTPVSCAWQ 341
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
W+ LA E+ +L+ RQGVR + V +T V DG + GE++ R ++M+GY
Sbjct: 342 DGWDDLAPAEQGKLRVRQGVRAAMFEGLMVGDADTLAPVPRDGTTAGELMLRGNTVMMGY 401
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
K++ + + N WF TGD+ V+H +GY +I DRSKDVIISGGENISS EVE V++ +
Sbjct: 402 FKNEAATRKALA-NGWFRTGDVAVLHGNGYAQITDRSKDVIISGGENISSVEVEDVVHGH 460
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
PA+ A+VAQ D+ WG+ PC F+ L+ ++ P+E+ II FCR RL H+ + VI
Sbjct: 461 PAVLHAAVVAQPDERWGEVPCVFIELRAGVA-APSEQEIISFCRERLAHFKCPRRVIFT- 518
Query: 417 ELPKTATGKIQKFVLRE 433
LPKTATGKIQKF LRE
Sbjct: 519 PLPKTATGKIQKFRLRE 535
>gi|413957080|gb|AFW89729.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 577
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/444 (46%), Positives = 277/444 (62%), Gaps = 16/444 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKP-VLIHDDVSATSSPT 63
RLD V+ +L HS +KL FVDY LA AL L + P V + DD+ + +
Sbjct: 97 RLDAAAVATILRHSGAKLFFVDYDYVRLAGDALRLLAAAAGGTVPLVAVVDDIDSPTGAR 156
Query: 64 VGHPNFKWV----QPES-------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G ++ + P++ EWD + LNYTSGTTS+PKGVV+ HRG ++ T S L+
Sbjct: 157 LGELEYEALVAHGDPDADLPPLADEWDAVTLNYTSGTTSAPKGVVYSHRGAYLSTTSLLL 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV+LWTLPMFH NGW+++WGMAA GG N+C+R IY I H VTH+C
Sbjct: 217 QWGVATDPVYLWTLPMFHCNGWTFTWGMAARGGVNVCIRDARRADIYRAIARHRVTHMCC 276
Query: 173 ALVVLNML---SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
A VV ++L + L+ PV +LT GA PPAA+L R E +GF V+H+YGLTE G
Sbjct: 277 APVVFSILLDGDGDGDGRQLEAPVHVLTGGAPPPAALLERVERIGFKVTHAYGLTEATGP 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
++C W+ QW+ L ERARLKARQG+ + LAD DV + +T SV DG+S GEIV R
Sbjct: 337 ALACEWRDQWDRLPLPERARLKARQGISVLSLADADVKNVDTMASVPRDGKSLGEIVLRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
S+M GYL + E + R WF TGD+GVVH DGY+EIKDRSKDVIISGGENI S EV
Sbjct: 397 SSVMKGYLNNPEANDGAFR-GGWFLTGDVGVVHPDGYIEIKDRSKDVIISGGENICSKEV 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VL+ +PA+ + A+VA WG+ PCAFV + + +E+ ++ FC R+ +M
Sbjct: 456 EEVLFRHPAVADAAVVAMPHPRWGETPCAFVVPRDGKAHGLSEDDVLAFCARRMARFMVP 515
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K V + LP+ A GK++K LRE
Sbjct: 516 KKVEVIGALPRNALGKVEKVKLRE 539
>gi|386817691|ref|ZP_10104909.1| AMP-dependent synthetase and ligase [Thiothrix nivea DSM 5205]
gi|386422267|gb|EIJ36102.1| AMP-dependent synthetase and ligase [Thiothrix nivea DSM 5205]
Length = 547
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/448 (44%), Positives = 279/448 (62%), Gaps = 17/448 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI-LPKPVLIHD--------- 54
RLD V+ +L H+E+K+L + + + + ALSL + LP + I D
Sbjct: 104 RLDAASVAFILKHAEAKVLITEREMAAVVNHALSLLEDDEYPLPFVIDIDDPTFVGGALL 163
Query: 55 -DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
DV+ G P F W +P+ EW+ ++LNYTSGTT PKGVV+ HRG + VS+++
Sbjct: 164 GDVTYEQFIAAGIPGFAWRRPDDEWNAISLNYTSGTTGDPKGVVYHHRGAHLNAVSNVLS 223
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +PN V+LWTLPMFH NGW + W +AAV GTN+CLR V I + IK V H+CGA
Sbjct: 224 WGMPNGAVYLWTLPMFHCNGWCFPWTVAAVAGTNVCLRHVRADQILAAIKAEKVDHMCGA 283
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ +P+ + + VK++T+GA PPAAV+ E +GF V+ YGLTET G V
Sbjct: 284 PIVLSMMMGAPAEQKAGISHQVKVMTAGAPPPAAVIQGMEEMGFDVTQVYGLTETYGPCV 343
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
W+ W+ L ERARLKARQGVR + V P T V+ DG++ GEI R
Sbjct: 344 VSEWQHDWDGLPIAERARLKARQGVRVQLQEGLMVADPATLEPVERDGETIGEIFMRGNI 403
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ ++ WF++GD+ V H DGY+EIKDRSKD+IISGGENISS E+E
Sbjct: 404 VMKGYLKNPA-TTAAAFAGGWFHSGDLAVWHPDGYVEIKDRSKDIIISGGENISSIELED 462
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
LY +PA+ +VA+VA++D+ WG+ PCAF+ LK +EE +I +CR + + K
Sbjct: 463 TLYRHPAVQDVAVVARQDEKWGEVPCAFIKLK--DGANLSEEDVIAYCRENMARFKVPKK 520
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAVN 439
V+ D LP+T+TGK+QKF+LRE A +
Sbjct: 521 VVFVD-LPRTSTGKVQKFILREWAQAAD 547
>gi|386011805|ref|YP_005930082.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
gi|313498511|gb|ADR59877.1| Acyl-CoA synthetase [Pseudomonas putida BIRD-1]
Length = 540
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 282/448 (62%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AL+L P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHAVIEGALALLEH----PPLVVDVDDPEYGEGRAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 157 SQLDYEALLNEGDPEFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + ++PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD I ++I+ H V+H+CGA
Sbjct: 217 WAMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + ++ PV+ + +GA+PPA V+ E +G V+H+YGLTE G V
Sbjct: 277 PIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEQMGIKVTHTYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +W+ L+ ERAR+K+RQGVR L + V P+T V DG + GEI R +
Sbjct: 337 VCAWHDEWDALSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ R WF+TGD+ V H+DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPEATAEAFR-GGWFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D+ WG+ PCAFV+LK ++ T EA I +CR L + K
Sbjct: 456 ALYKHPAVLEAAVVARPDEKWGETPCAFVALK--PGREDTREADITSWCREHLAGFKVPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
+V+ ELPKT+TGKIQK+VLR+ A+
Sbjct: 514 TVVF-GELPKTSTGKIQKYVLRDRAKAL 540
>gi|15218839|ref|NP_176763.1| benzoyloxyglucosinolate 1 [Arabidopsis thaliana]
gi|75313812|sp|Q9SS01.1|AAE20_ARATH RecName: Full=Benzoate--CoA ligase, peroxisomal; AltName:
Full=Acyl-activating enzyme 20; AltName: Full=Protein
BENZOYLOXYGLUCOSINOLATE 1
gi|6227013|gb|AAF06049.1|AC009513_5 Similar to gb|X94625 amp-binding protein from Brassica napus and is
a member of the PF|00501 AMP-binding enzymes
[Arabidopsis thaliana]
gi|332196315|gb|AEE34436.1| benzoyloxyglucosinolate 1 [Arabidopsis thaliana]
Length = 580
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/461 (43%), Positives = 281/461 (60%), Gaps = 28/461 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS---NTILPKPVLIHDDVSATSS 61
RLD ++ +L H++ K+LF+D LA +L L S N LP + +D +S
Sbjct: 97 RLDATSIAAILRHAKPKILFLDRSFEALARESLHLLSSEDSNLNLPVIFIHENDFPKRAS 156
Query: 62 ---------PTVGHPN----FKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
G P + + + E DP++LNYTSGTT+ PKGVV HRG ++ T+
Sbjct: 157 FEELDYECLIQRGEPTPSMVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLCTL 216
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
S++I W + PV+LWTLPMFH NGW+++WG AA GGT++C+R V P IY I+ H VT
Sbjct: 217 SAIIGWEMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVT 276
Query: 169 HICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+C V N+L +S P PV +LT G+ PPAA++ + + LGF V H+YG TE
Sbjct: 277 HMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPPPAALVKKVQRLGFQVMHAYGQTEA 336
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G ++ C W+ +WN L + ++ LKARQG+ +GLAD+DV + ET S DG++ GEI+
Sbjct: 337 TGPILFCEWQDEWNRLPENQQMELKARQGISILGLADVDVKNKETQKSAPRDGKTMGEIL 396
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+ SIM GYLK+ + + + + W TGD+GV+H DG++EIKDRSKD+IISGGENISS
Sbjct: 397 IKGSSIMKGYLKNPKATFEAFK-HGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISS 455
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL-KWELSKKP--------TEEAIIE 397
EVE+VLY P + E A+VA WG+ PCAFV L K E + K E +IE
Sbjct: 456 VEVENVLYKYPKVLETAVVAMPHPTWGETPCAFVVLEKSETTIKEDRVDKFQTRERNLIE 515
Query: 398 FCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+CR LPH+M + V+ +ELPK GKI K LR+I +
Sbjct: 516 YCRENLPHFMCPRKVVFLEELPKNGNGKILKPKLRDIAKGL 556
>gi|328542507|ref|YP_004302616.1| AMP-dependent synthetase/ligase [Polymorphum gilvum SL003B-26A1]
gi|326412253|gb|ADZ69316.1| AMP-dependent synthetase and ligase [Polymorphum gilvum
SL003B-26A1]
Length = 544
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/439 (45%), Positives = 279/439 (63%), Gaps = 14/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP--------SNTILPKPVLIHDDV 56
RLD ++ L H+ES+++ D + +P+ AL+L S+ + P+ +
Sbjct: 105 RLDAAIIAFQLDHAESRVVITDREFAPVMRQALALARVRPVVIDYSDPVYPQEGERLGCI 164
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ G PNF W PE EWD + LNYTSGTT +PKGVV+ HRG +++ ++++ +
Sbjct: 165 DYDAFVASGDPNFAWSLPEDEWDAITLNYTSGTTGNPKGVVYHHRGAYLLAQANILTASM 224
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
PV+LWTLPMFH NGW + W ++ V GT++CLR V I+ +I GVTH+CGA ++
Sbjct: 225 AKHPVYLWTLPMFHCNGWCFPWSLSVVSGTHVCLRWVRPKAIWDLIADEGVTHLCGAPII 284
Query: 177 LNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
++ L +P + LDR V+ T+ A PP +VL + GF V+H YGLTE G V
Sbjct: 285 MSTLLGTPPVDKRSLDRTVEFFTAAAPPPESVLAAMKDAGFNVTHLYGLTEVYGPAVVND 344
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
WK +W+ L E+A KARQGVR + L + V+ P T V DGQ+ GE++FR +M
Sbjct: 345 WKGEWDGLPADEQAAKKARQGVRYVALEGLTVMDPATMTPVPADGQTLGEVMFRGNVVMK 404
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK++E + WF++GD+GV+H DGY+++KDRSKD+IISGGENISS EVE VLY
Sbjct: 405 GYLKNREATEEAFA-GGWFHSGDLGVLHPDGYIQLKDRSKDIIISGGENISSIEVEDVLY 463
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ A+VA+ D+ WG+ PCAFV LK + +EE II FCRAR+ H+ A ++V+
Sbjct: 464 KHPAVQAAAVVARPDERWGETPCAFVELK--AGAQTSEEEIIAFCRARMAHFKAPRTVVF 521
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKT+TGKIQKF LRE
Sbjct: 522 -CELPKTSTGKIQKFALRE 539
>gi|167033374|ref|YP_001668605.1| acyl-CoA synthetase [Pseudomonas putida GB-1]
gi|166859862|gb|ABY98269.1| AMP-dependent synthetase and ligase [Pseudomonas putida GB-1]
Length = 540
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 283/448 (63%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AAL+L P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHAVIEAALALLEH----PPLVIDVDDPEYGEGRAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P+F W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 157 SELDYEALLAEGDPDFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + ++PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD I ++I+ H V+H+CGA
Sbjct: 217 WAMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLIREHRVSHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + ++ PV+ + +GA+PPA V+ E +G V+H+YGLTE G V
Sbjct: 277 PIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEEMGIKVTHTYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +W+ L+ ERAR+K+RQGVR L + V P+T V DG + GEI R +
Sbjct: 337 VCAWHDEWDALSLDERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGNTLGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ R WF+TGD+ V H+DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPEATAEAFR-GGWFHTGDLAVWHADGYVEIKDRLKDIIISGGENISTIEVED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D+ WG+ PCAFV+LK ++ T E I +CR L + K
Sbjct: 456 ALYKHPAVLEAAVVARPDEKWGETPCAFVALK--PGREDTRETDITSWCREHLAGFKVPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
+V+ ELPKT+TGKIQK+VLR+ A+
Sbjct: 514 TVVF-GELPKTSTGKIQKYVLRDRAKAL 540
>gi|429214206|ref|ZP_19205370.1| acyl-CoA synthetase [Pseudomonas sp. M1]
gi|428155801|gb|EKX02350.1| acyl-CoA synthetase [Pseudomonas sp. M1]
Length = 540
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/443 (45%), Positives = 274/443 (61%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AAL + P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHDVIRAALGMLDH----PPLVIDVDDPEYGEGEPV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P + W P EWD ++LNYTSGTT +PKGVV+ HRG ++ ++ + +
Sbjct: 157 SSLDYEALLAEGDPEYAWAWPRDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + PV+LWTLPMFH NGW Y W + A+ GT++CLR+VD I ++I+ H V+H+CGA
Sbjct: 217 WSMGQHPVYLWTLPMFHCNGWCYPWTVTALAGTHVCLRRVDPQKILTLIREHRVSHMCGA 276
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 PIVLNALINMPDSAKAAIDHPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +W+ L ERAR+K+RQGVR L + V P+T V DGQS GEI R +
Sbjct: 337 VCAWHEEWDELPLDERARIKSRQGVRYPTLEGVMVADPKTLEPVPRDGQSVGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPSATEEAFA-GGWFHTGDLAVWHPDGYVEIRDRLKDIIISGGENISTIEVEG 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHK 410
VL+ +PA+ E A+VA+ D+ WG+ PCAFV+LK TE A +I FCR L + K
Sbjct: 456 VLFRHPAVLEAAVVARPDERWGETPCAFVTLK--AGHADTEAAQVIAFCREHLAGFKVPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+V+ ELPKT+TGK+QKFVLR+
Sbjct: 514 TVVF-TELPKTSTGKVQKFVLRD 535
>gi|356564634|ref|XP_003550556.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 569
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/452 (45%), Positives = 280/452 (61%), Gaps = 26/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF--PSNTILPKPVLIHDD------- 55
RL+ ++ LL H + + VD + LA AL ++ + T P +++ D
Sbjct: 106 RLNASTIAFLLGHCTAAAVIVDQEFFSLAEEALKIWSEKAKTFSPPLLIVIGDENCDPKA 165
Query: 56 ---------VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
V G P + W PE EW ++L YTSGTT+SPKGVV HRG +++
Sbjct: 166 LKYALGKGAVDYEDFLQSGDPEYAWKPPEDEWQSISLGYTSGTTASPKGVVLHHRGAYLM 225
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++S + W + V+LWTLPMFH NGW Y+W +AA+ GTNICLR+V +Y I +
Sbjct: 226 SLSGALIWGMTEGAVYLWTLPMFHCNGWCYTWTLAALCGTNICLRQVTPKAVYEAIAKYK 285
Query: 167 VTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
V+H C A VVLN + ++P+ PL V + T+GA+PP +VL GF V+H+YGL
Sbjct: 286 VSHFCAAPVVLNTIVNAPAEDTILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGL 345
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
+ET G V CAWK +W +L RARL ARQGVR +GL +DVV+ +T V DG++ G
Sbjct: 346 SETYGPSVYCAWKPEWESLPPENRARLNARQGVRYVGLEGLDVVNTKTMEPVPADGKTVG 405
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R S+M GYLK+ + + N WF++GD+ V H DGY+EIKDRSKD+IISG EN
Sbjct: 406 EIVMRGNSVMKGYLKNPKANEETFA-NGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAEN 464
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTE---EAIIEFCR 400
ISS E+E+ LY +PAI E A+VA+ D+ WG+ PCAFV+LK + K + E I++FC+
Sbjct: 465 ISSVEIENTLYSHPAILEAAVVARADEKWGESPCAFVTLKPGVDKSNGQRIIEDILKFCK 524
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
A++P Y KSV+ LPKTATGKIQK +LR
Sbjct: 525 AKMPAYWVPKSVVF-GALPKTATGKIQKHILR 555
>gi|339487949|ref|YP_004702477.1| acyl-CoA synthetase [Pseudomonas putida S16]
gi|338838792|gb|AEJ13597.1| acyl-CoA synthetase [Pseudomonas putida S16]
Length = 540
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/448 (44%), Positives = 284/448 (63%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AAL+L P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHTVIEAALALLEH----PPLVVDVDDPEYGEGRAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P+F W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 157 SELDYEAFLAEGDPDFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMV 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + ++PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD I ++I+ H V+H+CGA
Sbjct: 217 WGMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLIREHRVSHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + ++ PV+ + +GA+PPA V+ E +G V+H+YGLTE G V
Sbjct: 277 PIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEEMGIQVTHTYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +W+ L+ ERAR+K+RQGVR L + V P+T V DG + GEI R +
Sbjct: 337 VCAWHDEWDDLSLEERARIKSRQGVRYPTLDGLMVADPQTLEPVPRDGNTLGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ R WF+TGD+ V H+DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPEATAEAFR-GGWFHTGDLAVWHTDGYVEIKDRLKDIIISGGENISTIEVED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D+ WG+ PCAFV+LK ++ T EA I +CR L + K
Sbjct: 456 ALYKHPAVLEAAVVARPDEKWGETPCAFVALK--PGREDTREADITSWCREHLAGFKVPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
+V+ ELPKT+TGKIQK+VLR+ A+
Sbjct: 514 TVVF-GELPKTSTGKIQKYVLRDRAKAL 540
>gi|431802966|ref|YP_007229869.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
gi|430793731|gb|AGA73926.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
Length = 540
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 284/448 (63%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AAL+L P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHTVIEAALALLEH----PPLVVDVDDPEYGEGRAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P+F W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 157 SELDYEAFLAEGDPDFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMV 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + ++PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD I ++I+ H V+H+CGA
Sbjct: 217 WGMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLIREHRVSHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + ++ PV+ + +GA+PPA V+ E +G V+H+YGLTE G V
Sbjct: 277 PIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEEMGIQVTHTYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +W+ L+ ERAR+K+RQGVR L + V P+T V DG + GEI R +
Sbjct: 337 VCAWHDEWDELSLEERARIKSRQGVRYPTLDGLMVADPQTLEPVPRDGNTLGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ R WF+TGD+ V H+DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPEATAEAFR-GGWFHTGDLAVWHTDGYVEIKDRLKDIIISGGENISTIEVED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D+ WG+ PCAF++LK ++ T EA I +CR L + K
Sbjct: 456 ALYKHPAVLEAAVVARPDEKWGETPCAFIALK--PGREDTREADITSWCREHLAGFKVPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
+V+ ELPKT+TGKIQK+VLR+ A+
Sbjct: 514 TVVF-GELPKTSTGKIQKYVLRDRAKAL 540
>gi|421619426|ref|ZP_16060380.1| acyl-CoA synthetase [Pseudomonas stutzeri KOS6]
gi|409778457|gb|EKN58156.1| acyl-CoA synthetase [Pseudomonas stutzeri KOS6]
Length = 549
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 276/442 (62%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+++L D + + + AA+ + P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEARVLIADREFASVVRAAVGMLDH----PPLVIDVDDPEYGEGEPV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W PE EW ++LNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 157 SNLDYEALLAEGDPAFAWQWPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I +I+ H VTH+CGA
Sbjct: 217 WAMGNHPVYLWTLPMFHCNGWCYPWTVTALAGVHVFLRRVDPQKILGLIREHQVTHLCGA 276
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P++ +D PV+ + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 PIVLNALVNMPASAKAAIDHPVQAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW ++W+ ERA +KARQGVR L + V P+T DGQ+ GEI R +
Sbjct: 337 ICAWHAEWDERPLEERAEIKARQGVRYPTLEGLMVADPKTLEPTPRDGQTIGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ ++ + WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ E+E
Sbjct: 397 VMKGYLKNPSATAEAF-EGGWFHTGDLAVCHPDGYVEIKDRLKDIIISGGENISTIELEG 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ E A+VA+ D+ WG+ PCAF++LK + + E+AII FCR L + ++
Sbjct: 456 VLYRHPAVLEAAVVARPDEKWGETPCAFINLKAD-HQAVDEDAIIAFCREHLAAFKVPRT 514
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ E LPKT+TGKIQK+VLRE
Sbjct: 515 VVFE-VLPKTSTGKIQKYVLRE 535
>gi|297838249|ref|XP_002887006.1| acyl-activating enzyme 11 [Arabidopsis lyrata subsp. lyrata]
gi|297332847|gb|EFH63265.1| acyl-activating enzyme 11 [Arabidopsis lyrata subsp. lyrata]
Length = 572
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/453 (44%), Positives = 290/453 (64%), Gaps = 20/453 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD K ++++L H+E K+LFVD++ +PL LSL P++ P P +I +++ +T++P
Sbjct: 97 RLDAKTIAIILRHAEPKILFVDHEFAPLIQEVLSLLPTDESQPHPRIIFINEIDSTTNPF 156
Query: 64 VGHPNFKWV----QP-----------ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
+++ + +P +E DP++LNYTSGTT+ PKGVV HRG ++ +
Sbjct: 157 SKDLDYEGLIRKGEPTPSLYASMFLVHNEHDPISLNYTSGTTADPKGVVVSHRGAYLSAL 216
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
S +I W++ PV+LWTLP+FH NGW+ W +AA GGTN+C+R V P IY I+ HGVT
Sbjct: 217 SLIIGWQMGIFPVYLWTLPIFHCNGWTLPWSVAARGGTNVCIRHVTAPEIYKNIELHGVT 276
Query: 169 HICGALVVLNMLSSSPSTKPLDR--PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+ V L T + PV++LT G+SPPA ++ + E LGF V H YGLTE
Sbjct: 277 HMSCVPTVFRFLLEGDRTNQSHKSPPVQVLTGGSSPPAVLIKKVEQLGFQVMHGYGLTEA 336
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G V+ C W+ +WN L + ++ +L+ RQGVR + LAD+DV + +T SV DG++ GEIV
Sbjct: 337 TGPVLFCEWQDEWNKLPEHQQMQLQQRQGVRHLTLADVDVKNTKTLESVPRDGKTMGEIV 396
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+ +M GYLK+ + +S + + W TGDIGV+H DGY+EIKDRSKD+IISGGENISS
Sbjct: 397 IKGSILMKGYLKNPKATSEAFK-HGWLNTGDIGVIHPDGYVEIKDRSKDIIISGGENISS 455
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPH 405
EVE VLYM+ + E A+VA WG+ PCAFV LK + T E +I++CR +PH
Sbjct: 456 IEVEKVLYMHQQVLEAAVVAMPHPLWGETPCAFVVLKNGEEELVTNEGDLIKYCRENMPH 515
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+M + V+ ELPK + GKI K LR++ A+
Sbjct: 516 FMCPRKVVFFQELPKNSNGKIPKSKLRDVAKAL 548
>gi|260432681|ref|ZP_05786652.1| acyl-CoA synthetase [Silicibacter lacuscaerulensis ITI-1157]
gi|260416509|gb|EEX09768.1| acyl-CoA synthetase [Silicibacter lacuscaerulensis ITI-1157]
Length = 542
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/448 (46%), Positives = 278/448 (62%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI---LPKP---------VLI 52
RLD ++ +L+H+ESK+L VD + S + AL + + + P L
Sbjct: 104 RLDAPIIAFILNHAESKVLLVDPEFSGVVKQALEQVDHDILVIDIEDPSFDGGEKLGALT 163
Query: 53 HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+DD+ A G P F W P EWD + LNYTSGTT +PKGVV+ HRG + S+++
Sbjct: 164 YDDLLAE-----GDPEFDWSLPADEWDAITLNYTSGTTGNPKGVVYHHRGAALNATSNIL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P V+LWTLPMFH NGW + W MAA GT++CLR V IY + VTH CG
Sbjct: 219 TWGMPQHSVYLWTLPMFHCNGWCFPWTMAANAGTSVCLRAVRDAPIYRAFRDEKVTHFCG 278
Query: 173 ALVVLNMLSSSPS-TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
A +VLNML+++P K +K++T+GA PPAAV+ E +G V+H YGLTET G V
Sbjct: 279 APIVLNMLANAPDHLKDFGHEIKVMTAGAPPPAAVIAAMEGMGIEVTHVYGLTETYGPSV 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAWK +WN ERA LK RQGV+ + L+ + V PET V DG++ GEI +
Sbjct: 339 VCAWKDEWNDKPAEERAALKVRQGVKYVALSGLMVADPETLEPVPADGETMGEIFMQGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E + R WF +GD+GV+H DGY+ +KDRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPEATRKAFR-GGWFASGDLGVMHPDGYIALKDRSKDIIISGGENISSVEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
+LY +PA+ E A+VA+ D+ WG+ PCAFV LK + TE +I FCR + H+ A K+
Sbjct: 458 ILYKHPAVMEAAVVAKPDEKWGETPCAFVELK--PGAEATEADLIAFCRDHMAHFKAPKT 515
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAVN 439
V+ LPKT+TGKIQKF LRE A+
Sbjct: 516 VVF-GPLPKTSTGKIQKFKLREQARALG 542
>gi|359393556|ref|ZP_09186609.1| Medium-chain-fatty-acid--CoA ligase [Halomonas boliviensis LC1]
gi|357970803|gb|EHJ93248.1| Medium-chain-fatty-acid--CoA ligase [Halomonas boliviensis LC1]
Length = 585
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/444 (45%), Positives = 276/444 (62%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD + +S +L H E+K + VD + + + A++ + KP++I
Sbjct: 144 RLDAEAISYMLEHGEAKAILVDPEFAEVIQQAVA-----KLTHKPLIIDVADVEFLGETH 198
Query: 54 --DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
++ + G +F + P EWD ++LNYTSGTT PKGVV+ HRG ++ VS++
Sbjct: 199 GIGELEYEALLNEGDADFAYQLPADEWDAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNI 258
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
++W +P+ P++LWTLPMFH NGW + W +AA G N+CLR+VD I +I VTH
Sbjct: 259 MEWAMPHHPIYLWTLPMFHCNGWCFPWTIAANAGVNVCLRRVDPKKIMQLIAEERVTHFS 318
Query: 172 GALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA ++LN L + P+ D PVK+ T+GA+PPA+V+ E LG V+H YGLTE G
Sbjct: 319 GAPIILNGLVNLPAEDKHQFDHPVKVTTAGAAPPASVIAGVEKLGIEVTHVYGLTEVYGP 378
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW+ W+ L RA++KARQGVR L + V P T V DGQ+ GEI+ R
Sbjct: 379 VTVCAWRETWDELPLEARAKIKARQGVRYHMLEALCVADPLTLEPVPKDGQTMGEILMRG 438
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ E + + + W++TGD+ V H DGY+EIKDRSKD+IISGGENIS+ EV
Sbjct: 439 NNVMKGYLKNPEATEQAL-EGGWYHTGDLAVWHPDGYIEIKDRSKDIIISGGENISTIEV 497
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E +Y +PA+ E A+VA+ D+ WG+ PCAFV LK + T+ II CR L Y
Sbjct: 498 EDAIYGHPAVEEAAVVAKPDEKWGETPCAFVKLKVGYGEV-TDADIIAHCREHLAGYKVP 556
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K+VI ELPKT+TGKIQKFVLRE
Sbjct: 557 KTVIF-SELPKTSTGKIQKFVLRE 579
>gi|330809084|ref|YP_004353546.1| acid--thiol ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423696754|ref|ZP_17671244.1| AMP-binding domain protein [Pseudomonas fluorescens Q8r1-96]
gi|327377192|gb|AEA68542.1| putative acid--thiol ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388004112|gb|EIK65439.1| AMP-binding domain protein [Pseudomonas fluorescens Q8r1-96]
Length = 540
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/445 (43%), Positives = 280/445 (62%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L H E+K+L D + + AA+ + L P L+ D
Sbjct: 101 RLDAEAIAFMLAHGEAKVLIADREFHDVVQAAIGM------LDHPPLVIDLDDPEYGEGQ 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
++ + G PNF W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ ++ +
Sbjct: 155 ANSELDYEAFLAEGDPNFAWQWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ H +TH+C
Sbjct: 215 MTWAMGNHPVYLWTLPMFHCNGWCYPWTVTALAGVHVFLRRVDPQKILNLIREHQITHLC 274
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G
Sbjct: 275 GAPIVLNALVNMPDSAKAAIDHPVSAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW + W+ L +RA++KARQGVR L + V P T HDGQ+ GEI R
Sbjct: 335 VTLCAWHAAWDELPLEQRAQIKARQGVRYPTLEGLMVADPRTLEPTPHDGQTIGEIFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ ++ + WF+TGD+ V H+DGY+EI+DR KD+IISGGENIS+ E+
Sbjct: 395 NTVMKGYLKNPSATAEAF-EGGWFHTGDLAVTHADGYVEIRDRLKDIIISGGENISTIEL 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ E A+VA+ D+ WG+ PCAF++LK + ++ E II FCR L +
Sbjct: 454 EGVLYRHPAVLEAAVVARPDEKWGETPCAFITLKSD-REEVHEAEIISFCREHLAGFKVP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLREI 434
++V+ +LPKT+TGKIQKFVLR++
Sbjct: 513 RTVVFT-QLPKTSTGKIQKFVLRDM 536
>gi|218192654|gb|EEC75081.1| hypothetical protein OsI_11224 [Oryza sativa Indica Group]
Length = 585
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 204/450 (45%), Positives = 279/450 (62%), Gaps = 29/450 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN---TILPKPVLIHDDVSATSS 61
RL+ + ++ LL HS ++++ VD + LA +L + + P +++ D +
Sbjct: 110 RLNAETIAFLLDHSVAEVVMVDQEFFTLAEESLKILAEKKKWSFRPPILIVIGDPTCDPK 169
Query: 62 P----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
P G P F W P+ EW +AL YTSGTTSSPKGVV HRG ++
Sbjct: 170 PLQYALGRGAIEYEEFLKTGDPEFAWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYV 229
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ + + W +P V+LWTLPMFH NGW Y+W MAA+ GTNICLR+V IYS I +H
Sbjct: 230 MALGVAMVWGMPEGAVYLWTLPMFHCNGWCYTWAMAAMCGTNICLRQVSSKAIYSGIVNH 289
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH+C A VV N L ++P+++ PL R V I+ +GA+P ++L GF V+H+YG
Sbjct: 290 GVTHMCAAPVVFNNLINAPASETFLPLPRVVNIMVAGAAPTPSLLAALSIRGFRVTHTYG 349
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L ER+RL RQGVR L +DVV P+T V DG+S
Sbjct: 350 LSETYGPSTVCAWKPEWDRLPLEERSRLHCRQGVRYGALEGLDVVDPKTMAPVAADGKSY 409
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + ++ W+++GD+GV H DGY+E+KDR KD+IISGGE
Sbjct: 410 GEIVMRGNAVMKGYLKNPKANAEAFA-GGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGE 468
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA----IIEF 398
NISS EVE VLY +PA+ E ++VA+ D+ WG+ PCAFV+LK E + E A I+ F
Sbjct: 469 NISSLEVEKVLYAHPAVLEASVVARADEQWGESPCAFVTLK-EGADSSDEAAVAGDIMRF 527
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQK 428
CR R+P Y KSV+ LP TATGKI+K
Sbjct: 528 CRERMPGYWVPKSVVF-GPLPMTATGKIKK 556
>gi|338997524|ref|ZP_08636219.1| acyl-CoA synthetase [Halomonas sp. TD01]
gi|338765498|gb|EGP20435.1| acyl-CoA synthetase [Halomonas sp. TD01]
Length = 543
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 201/444 (45%), Positives = 278/444 (62%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD + +S +L H E+K + VD + + + A++L KP++I
Sbjct: 103 RLDAEAISYMLAHGEAKAILVDPEFAQVINDAVALLDD-----KPLIIDVFDLEFLGETQ 157
Query: 54 --DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
+V + G ++ + P+ EW ++LNYTSGTT PKGVV+ HRG ++ VS++
Sbjct: 158 GIGEVEYEALLAEGEADYAYTLPKDEWQAISLNYTSGTTGKPKGVVYHHRGAYLNAVSNI 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
++W +P+ PV+LWTLPMFH NGW + W +AA G ++CLRKVD I +I VTH
Sbjct: 218 LEWAMPHHPVYLWTLPMFHCNGWCFPWTIAANAGVSVCLRKVDPKRINDLIVDEKVTHFS 277
Query: 172 GALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P+ + D PVK+ T+GA+PPA+V+ E LG V+H YGLTE G
Sbjct: 278 GAPIVLNGLVNLPADQKREFDHPVKVTTAGAAPPASVIAGVEKLGIEVTHVYGLTEVYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW+ WN L RA++KARQGVR L + V P + V DG++ GEI+ R
Sbjct: 338 VTVCAWREAWNELPLESRAKIKARQGVRYHMLEALCVADPLSLEPVAKDGETIGEILMRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ E + + + W++TGD+ V H+DGY+EIKDRSKD+IISGGENIS+ EV
Sbjct: 398 NNVMKGYLKNAEATEKAL-EGGWYHTGDLAVWHADGYIEIKDRSKDIIISGGENISTIEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E +Y +PA+ E A+VA+ D+ WG+ PCAFV LK + TE II CR L +
Sbjct: 457 EDAIYSHPAVEEAAVVAKPDEKWGETPCAFVKLKIGYGEI-TEADIIAHCREHLASFKVP 515
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K+VI ELPKT+TGKIQKFVLRE
Sbjct: 516 KTVIF-SELPKTSTGKIQKFVLRE 538
>gi|357478905|ref|XP_003609738.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355510793|gb|AES91935.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 566
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 207/452 (45%), Positives = 284/452 (62%), Gaps = 26/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT-ILPKPVLI------HDDVS 57
RL+ ++ LL H + ++ VD + LA AL ++ T P+LI D S
Sbjct: 103 RLNASTIAFLLGHCTASVVIVDQEFFSLAEEALKIWSDKTKTFKSPILIVIGDENCDPKS 162
Query: 58 ---ATSSPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
A S V G P + W PE EW +AL YTSGTT+SPKGVV HRG +++
Sbjct: 163 LRYALSKGAVEYEDFLRSGDPEYNWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLM 222
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++S + W + V+LWTLPMFH NGW Y+W +AA+ GTNICLR+V +Y I +
Sbjct: 223 SLSGALIWGMNEGAVYLWTLPMFHCNGWCYTWTLAALFGTNICLRQVSAKAVYEAIVKYK 282
Query: 167 VTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
VTH C A VVLN + ++P+ + PL V + T+GA+PP +VL GF V+H+YGL
Sbjct: 283 VTHFCAAPVVLNSIINAPAEETILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGL 342
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
+ET G V CAWK +W++L RARL ARQGV+ I L +DVV+ +T V DG++ G
Sbjct: 343 SETYGPSVYCAWKPEWDSLPPESRARLHARQGVKYIALEGLDVVNTKTMQPVPADGKTVG 402
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R ++M GYLK+ + + N W+++GD+ V H DGY+EIKDRSKD+IISG EN
Sbjct: 403 EIVMRGNAVMKGYLKNPKANEESFA-NGWYHSGDLAVKHPDGYIEIKDRSKDIIISGAEN 461
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTE---EAIIEFCR 400
ISS EVE+ LY +PAI E ++VA+ D+ WG+ PCAFV+LK + + + E I++FCR
Sbjct: 462 ISSVEVENALYSHPAILETSVVARPDEKWGESPCAFVTLKPGVDRSNEQRLVEDILKFCR 521
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
A++P Y KSV+ LPKTATGK+QK +LR
Sbjct: 522 AKMPTYWVPKSVVF-GPLPKTATGKVQKHLLR 552
>gi|452962746|gb|EME67854.1| Acyl-CoA synthetase/AMP-acid ligase II [Magnetospirillum sp. SO-1]
Length = 542
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/445 (43%), Positives = 276/445 (62%), Gaps = 21/445 (4%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS 61
V RLD ++ +L H+E+K+L D + S + AL+ P V+ DD
Sbjct: 101 VNTRLDADAIAFILDHAEAKILITDREFSAVVKKALAALGR----PLTVIDIDDPQFKGG 156
Query: 62 PTVGHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+G ++ W P EW +ALNYTSGTT +PKGVV+ HRG ++ VS+
Sbjct: 157 ELLGEKTYEEFLDEAGAEAPWTMPTDEWQAIALNYTSGTTGNPKGVVYHHRGAYLNAVSN 216
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+ W++ + V+LWTLPMFH NGW + W MA V GT++CLR V V I + I+ VT+
Sbjct: 217 ALSWQMGDNTVYLWTLPMFHCNGWCFPWTMAVVAGTSVCLRHVRVDAIMAAIRDETVTNF 276
Query: 171 CGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +VLNM++++P+ + VK++T+GA+PPA V+ E +G+ V+H YGLTE G
Sbjct: 277 CGAPIVLNMINNAPAALKDGISHAVKVMTAGAAPPAPVIAGMERMGWEVTHVYGLTECYG 336
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
V C W +WN L+ E+A++KARQGVR L + V P T DG++ GEI R
Sbjct: 337 PTVQCVWHDRWNGLSIEEKAQIKARQGVRGPMLEGLMVADPVTLEPAPRDGRTVGEIFMR 396
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M GYLK+ + + WF+TGD+ V H DGY+EIKDRSKD+IISGGENISS E
Sbjct: 397 GNNVMKGYLKNAKATEEAFA-GGWFHTGDLAVRHPDGYIEIKDRSKDIIISGGENISSIE 455
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE LY +PA+ E A+VA+ D+ WG+ PCAF++LK + TE II FCR R+ H+
Sbjct: 456 VEDTLYAHPAVLEAAVVARPDEKWGETPCAFIALK--DGAEATEADIIAFCRERMAHFKV 513
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++++ LPKT+TGK+QKF+LR+
Sbjct: 514 PRTIVF-GGLPKTSTGKVQKFMLRQ 537
>gi|443468437|ref|ZP_21058654.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas pseudoalcaligenes
KF707]
gi|442897582|gb|ELS24483.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas pseudoalcaligenes
KF707]
Length = 540
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 278/445 (62%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L H E+K+L D + + AA+ + L +P L+ D
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHDVIHAAIGM------LDQPPLVIDVDDPEYGEGQ 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G P F W P EW ++LNYTSGTT +PKGVV+ HRG ++ + +
Sbjct: 155 AVSDLDYEALLAEGDPEFAWQWPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + NQPV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ H V+H+C
Sbjct: 215 MTWNMGNQPVYLWTLPMFHCNGWCYPWTVTALAGVHVFLRRVDPQKILNLIRDHQVSHLC 274
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G
Sbjct: 275 GAPIVLNALVNMPDSAKAAIDHPVNAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW +W+ L ERAR+K+RQGVR L + V P+T V DGQ+ GEI R
Sbjct: 335 VTVCAWHEEWDELPLEERARIKSRQGVRYPTLEGVMVADPKTLEPVPRDGQTIGEIFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ +S + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ E+
Sbjct: 395 NTVMKGYLKNPSATSEAF-EGGWFHTGDLAVWHPDGYVEIRDRLKDIIISGGENISTIEL 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ E A+VA+ D+ WG+ PCAFV+LK + + E II FCR L +
Sbjct: 454 EGVLYRHPAVLEAAVVARPDEKWGETPCAFVTLKADHADT-READIIGFCREHLASFKVP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLREI 434
K+V+ +LPKT+TGKIQK+VLR++
Sbjct: 513 KTVVFT-QLPKTSTGKIQKYVLRDM 536
>gi|407781501|ref|ZP_11128719.1| acyl-CoA synthetase [Oceanibaculum indicum P24]
gi|407207718|gb|EKE77649.1| acyl-CoA synthetase [Oceanibaculum indicum P24]
Length = 547
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 283/447 (63%), Gaps = 29/447 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPK--------------PV 50
RLD ++ +L H ESK L D + + + AL + +L + +
Sbjct: 107 RLDADTIAFILQHGESKALIADREFAGVVGPALKKLGRDILLVEIDDPEAGGAGSSLGGI 166
Query: 51 LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
D ++ SS V P P EW P+ALNYTSGTT +PKGVV+ HRG ++ +
Sbjct: 167 DYEDFLAEGSSGHVCAP------PADEWHPIALNYTSGTTGNPKGVVYSHRGAYLNAIGQ 220
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ + + Q +LWTLPMFH NGW+Y+W + AVGGT++CLR+VD +I+ I+ H V+H+
Sbjct: 221 VLAFGLGPQTRYLWTLPMFHCNGWTYTWAVTAVGGTHVCLRRVDPALIFPAIRDHAVSHM 280
Query: 171 CGALVVLNMLSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +VLNM+ +P + L D V++ T GA+PP+AV+ + E++GF V+H YGLTET G
Sbjct: 281 CGAPIVLNMMIHAPDDQKLAFDHVVEVATGGAAPPSAVIEKMEAMGFCVTHLYGLTETYG 340
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CAW+ W L +R+ ARQGV L M VV PET V DGQ+ GE++FR
Sbjct: 341 PSTVCAWQEDWADLELEKRSGKMARQGVHYPTLQGMRVVDPETQQDVPADGQTIGEVLFR 400
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M+GYLK+++ + W+++GD+ V+H DGY+E+KDR+KD+IISGGENISS E
Sbjct: 401 GNTVMMGYLKNRKATDEAFA-GGWYHSGDLAVLHPDGYMEVKDRAKDIIISGGENISSLE 459
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT--EEAIIEFCRARLPHY 406
VE L+ +P+I E A+VA+ D+ WG+ PCAFV+LK PT EE +I++CR +L +
Sbjct: 460 VEEALFRHPSIMEAAVVARPDEKWGESPCAFVTLK---PGAPTLSEEQVIDWCRQKLARF 516
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLRE 433
++V+ LPKT+TGKIQKFVLR+
Sbjct: 517 KVPRTVVF-GPLPKTSTGKIQKFVLRQ 542
>gi|299771536|ref|YP_003733562.1| acyl-CoA synthetase [Acinetobacter oleivorans DR1]
gi|298701624|gb|ADI92189.1| acyl-CoA synthetase [Acinetobacter oleivorans DR1]
Length = 545
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/442 (45%), Positives = 278/442 (62%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+ESK+L VD + LA ALSL P I+ + + DD + +
Sbjct: 101 RLDAKTIAFMLEHAESKVLLVDPEFVNLAREALSLIPDQHIIV--IDVADDEYEGENQFI 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWIAQGDINFVWHLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAEHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K D V+++ +GA+PP A++ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQTNFDHHVEVMVAGAAPPVAIIEGMRNMGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA +S WN L+ E+A+L +RQGV M V++PET V +DGQ+ GEI+FR
Sbjct: 339 LCASQSGWNELSIAEQAQLHSRQGVPYPLQDSMRVLNPETMQPVPNDGQTMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPQATQEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D W + PCAF+ LK + T E IIE C+ L + K
Sbjct: 458 VLYRHPAVLTAAVVAKPDARWQEVPCAFIELK--MGATATPEEIIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|242060224|ref|XP_002451401.1| hypothetical protein SORBIDRAFT_04g001460 [Sorghum bicolor]
gi|241931232|gb|EES04377.1| hypothetical protein SORBIDRAFT_04g001460 [Sorghum bicolor]
Length = 592
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 211/471 (44%), Positives = 287/471 (60%), Gaps = 41/471 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI-------LPKPVLIHDDVS 57
RLD SVLL HSE+K++FVD +A AL L +P VLI++ +
Sbjct: 103 RLDAGMASVLLQHSEAKVVFVDAALLGVAREALRLISQQAAAARASCRVPTVVLINEVLD 162
Query: 58 ATSSPTVGHPNFKWVQ------------------------PESEWDPMALNYTSGTTSSP 93
S G V P E +P+ALNYTSGTTS P
Sbjct: 163 EPLSAATGDNKIPGVDRCYEYEALLSSSSSCNPEEFLIRWPVDENEPIALNYTSGTTSRP 222
Query: 94 KGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKV 153
KGVV+ HRG ++ T++S++ + PV+LWT+PMFH NGW WG+AA GGTN+CLRKV
Sbjct: 223 KGVVYTHRGAYLNTLASVLLNDMTALPVYLWTVPMFHCNGWCLVWGVAAQGGTNVCLRKV 282
Query: 154 DVPIIYSVIKHHGVTHICGALVVLNML--SSSPSTKPLD---RPVKILTSGASPPAAVLL 208
I++ + H VTH+ GA VLNM+ +++ +PL +PV ++T GA PP VL
Sbjct: 283 TSAAIFAAVAAHRVTHMGGAPTVLNMVVNATAEERRPLKAGGKPVTVMTGGAPPPPQVLF 342
Query: 209 RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVH 268
R E LGF+V HSYGLTET G C W+ +W+ L ERA +K+RQG+ +GL ++DV
Sbjct: 343 RMEELGFLVIHSYGLTETYGPATVCTWRPEWDALPAAERAAIKSRQGLHHLGL-EVDVKD 401
Query: 269 PETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHS-DGYL 327
P T SV DG++ GE++FR ++M GY KD ++ W +GD+ V H+ DGY+
Sbjct: 402 PATMASVPADGRTMGEVMFRGNTVMSGYYKDAAATAE-AMAGGWLRSGDLAVRHAGDGYV 460
Query: 328 EIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELS 387
+I DRSKD+IISGGENIS+ EVE+ L+ +PA+ E A+V + D++WG+ PCAFV+LK
Sbjct: 461 KILDRSKDIIISGGENISTIEVEAALFAHPAVAEAAVVGRPDEYWGETPCAFVTLKE--G 518
Query: 388 KKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
K E ++ FCRARLP YMA ++V+ ELPKTATGK+QKF LRE A+
Sbjct: 519 KDVGAEEVMAFCRARLPRYMAPRTVVFVAELPKTATGKVQKFALREQAKAM 569
>gi|297180336|gb|ADI16554.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
bacterium HF4000_009C18]
Length = 542
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 276/446 (61%), Gaps = 27/446 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD K VS +L H+++K L VD Q + A+ L K +LI D
Sbjct: 101 RLDSKTVSYILKHADAKALIVDCQFHNIVKKAMEG------LDKKILIIDIDDKQADLKD 154
Query: 55 -----DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
S G N+ W +P+ EW ++LNYTSGTT +PKGVV+ HRG ++++
Sbjct: 155 AGNFGQFEYESFLNEGDVNYIWKKPKDEWQAISLNYTSGTTGNPKGVVYHHRGAYLMSTG 214
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
S + W +PN+ FL+T+PMFH NGW Y W +A + IC+R + I+++I H VTH
Sbjct: 215 SAVAWNMPNRLNFLYTVPMFHCNGWCYPWTLAMLHARVICIRNIRAKEIFNLITQHKVTH 274
Query: 170 ICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
GA ++LNM+ ++P KPL V +LT+ A PP+ + + ESLGF V H YGLTET
Sbjct: 275 FGGAPIILNMIVNAPKNEQKPLKHKVYVLTAAAPPPSIIFKKMESLGFEVMHVYGLTETY 334
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G ++ C W +W+ L + E+A + ARQGVR D++V+ PET SV DG++ GEI+
Sbjct: 335 GHILQCVWNKEWDNLTEDEKAEINARQGVRYPNTEDVEVMDPETMQSVPRDGKTMGEIMI 394
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R +M GY KD+E + M+ WF++GD+ V H +GY++IKDRSKD+IISGGENISS
Sbjct: 395 RGNVVMKGYFKDKEATEKSMK-GGWFHSGDLAVTHPNGYIQIKDRSKDIIISGGENISSI 453
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
E+E+ + + +++ A+VA+ D+ WG+ PCAFV L E KK TEE II+FC+ L +
Sbjct: 454 EIENTVAKHSSVSLAAVVAKPDEKWGEIPCAFVELTPE--KKATEEEIIKFCKETLAGFK 511
Query: 408 AHKSVIIEDELPKTATGKIQKFVLRE 433
K ++ ELPKT+TGKI+KF LR+
Sbjct: 512 IPKKIVF-GELPKTSTGKIKKFELRK 536
>gi|332285154|ref|YP_004417065.1| AMP-binding protein [Pusillimonas sp. T7-7]
gi|330429107|gb|AEC20441.1| putative AMP-binding enzyme [Pusillimonas sp. T7-7]
Length = 543
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/437 (42%), Positives = 279/437 (63%), Gaps = 11/437 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA---LAALSLFPSNTILPKPVLIHDDVSATSS 61
RLD + +L H ES+LLF D + L A + P + + + +SA S
Sbjct: 102 RLDAATLRFILEHGESRLLFYDTEFESLVQQVAAGMESPPLLVSIARLAGVSQGLSALSY 161
Query: 62 PTV---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
+ G P++ W + E EWD +ALNYTSGTT +PKGVV+ HRG ++ +S+ + + +
Sbjct: 162 EDMIAAGDPDYAWAKVEDEWDAIALNYTSGTTGNPKGVVYHHRGAYLAAMSNAMAFNMTA 221
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
V+LWTLPMFH NGW+Y+W + AVGGT++CLRKV + S I+ H VTH+CGA +VLN
Sbjct: 222 STVYLWTLPMFHCNGWAYTWAITAVGGTHVCLRKVQADHVLSRIQDHKVTHLCGAPIVLN 281
Query: 179 MLSSS--PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
ML + + L V+ T GA+PP+ V+ R + +GF ++H YGLTE+ G C W+
Sbjct: 282 MLLNDFHKNGHTLAESVQFATGGAAPPSPVIRRAQEIGFDITHLYGLTESYGPSALCVWQ 341
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
+ W L+ A+ ARQGV T+ + ++ V +P+ G V DGQ+ GE++ R ++M GY
Sbjct: 342 NDWEALSTDALAQKMARQGVGTLAIDELAVANPDDGGFVPADGQTLGELLMRGNTLMKGY 401
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
LK++ + RD WF+TGD+ V+H DGY+E+KDR+KD+IISGGENISS E+E VLY +
Sbjct: 402 LKNEAATDEAFRDG-WFHTGDLAVMHPDGYVEVKDRAKDIIISGGENISSQEIEEVLYRH 460
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
P + + A+VA D+ WG+ PCAF++LK + ++ E+ I+FC+ + + K ++
Sbjct: 461 PMVLDAAVVAMTDEKWGEVPCAFITLK-DDTQSANEQEFIDFCKQNMASFKTPKRIVF-G 518
Query: 417 ELPKTATGKIQKFVLRE 433
ELPKT+TGKI+K +LR+
Sbjct: 519 ELPKTSTGKIRKNILRD 535
>gi|330829571|ref|YP_004392523.1| AMP-binding protein [Aeromonas veronii B565]
gi|423209789|ref|ZP_17196343.1| hypothetical protein HMPREF1169_01861 [Aeromonas veronii AER397]
gi|328804707|gb|AEB49906.1| AMP-binding protein [Aeromonas veronii B565]
gi|404617647|gb|EKB14583.1| hypothetical protein HMPREF1169_01861 [Aeromonas veronii AER397]
Length = 540
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/443 (44%), Positives = 279/443 (62%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ + H++SK++ VD + + AL L S + V+ DD V
Sbjct: 104 RLDAESMAFIFQHAQSKVVLVDREFGAVVRKALDLLESQPL----VIAIDDPIYREGALV 159
Query: 65 GHPNFK------------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+++ W+ P+ EW ++LNYTSGTT +PKGVV+ HRG + +++++
Sbjct: 160 SDLDYEQFLAQGSGDEPGWL-PQDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNVL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P PV+LWTLPMFH NGW + W +AA G ++CLR V IY + H V+H C
Sbjct: 219 SWELPKHPVYLWTLPMFHCNGWCFPWTLAATAGVSVCLRHVQAAAIYEALHEHRVSHFCA 278
Query: 173 ALVVLNMLSSS-PSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML+++ P+ K LD P+K++T+GA+PPA V+ E++G V+H YGLTET G
Sbjct: 279 APIVLNMLNNADPALKQGLDHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPC 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V C + W T +RLKARQGV + +M V++P +G V DG++ GEIV R
Sbjct: 339 VLCEPQRSWQGQDATALSRLKARQGVASPLQGEMRVINPVSGEPVAKDGKTMGEIVLRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ S+ M + WF +GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 399 VVMKGYLKNPAASAEAMAEG-WFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P ++E A++A D+ WG+ PCAFV LK ++ T+ +I FCR ++ H+ A K
Sbjct: 458 DVLYRHPDVDEAAVIAMPDEKWGEVPCAFVKLK--EGRETTQAELIAFCREQMAHFKAPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+I LPKT+TGK+QKFVLR+
Sbjct: 516 RIIF-TPLPKTSTGKVQKFVLRK 537
>gi|15218840|ref|NP_176764.1| acyl activating enzyme 12 [Arabidopsis thaliana]
gi|75313811|sp|Q9SS00.1|AAE12_ARATH RecName: Full=Probable acyl-activating enzyme 12, peroxisomal
gi|6227014|gb|AAF06050.1|AC009513_6 Similar to gb|X94625 amp-binding protein from Brassica napus and is
a member of the PF|00501 AMP-binding enzymes
[Arabidopsis thaliana]
gi|332196316|gb|AEE34437.1| acyl activating enzyme 12 [Arabidopsis thaliana]
Length = 578
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/461 (44%), Positives = 283/461 (61%), Gaps = 29/461 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS---NTILPKPVLIHD-----DV 56
RLD ++ +L H++ K+LF+ PLA L L S N LP + IH+ V
Sbjct: 97 RLDATSIAAILRHAKPKILFIYRSFEPLAREILQLLSSEDSNLNLPV-IFIHEIDFPKRV 155
Query: 57 SATSSP-----TVGHPN----FKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
S+ S G P + + E DP++LNYTSGTT+ PKGVV HRG ++ T
Sbjct: 156 SSEESDYECLIQRGEPTPLLLARMFCIQDEHDPISLNYTSGTTADPKGVVISHRGAYLST 215
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+S++I W + PV+LWTLPMFH NGW+++WG AA GGT++C+R V P IY I+ H V
Sbjct: 216 LSAIIGWEMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNV 275
Query: 168 THICGALVVLNMLSSSPSTKPLDR--PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
TH+C V N+L S R PV +LT G+ PPAA++ + + LGF V H+YGLTE
Sbjct: 276 THMCCVPTVFNILLKGNSLDLSHRSGPVHVLTGGSPPPAALVKKVQRLGFQVMHAYGLTE 335
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
G V+ C W+ +WN L + ++ LKARQG+ +GL ++DV + ET SV DG++ GEI
Sbjct: 336 ATGPVLFCEWQDEWNRLPENQQMELKARQGLSILGLTEVDVRNKETQESVPRDGKTMGEI 395
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
V + SIM GYLK+ + + + + W +GD+GV+H DG++EIKDRSKD+IISGGENIS
Sbjct: 396 VMKGSSIMKGYLKNPKATYEAFK-HGWLNSGDVGVIHPDGHVEIKDRSKDIIISGGENIS 454
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL-KWELSKKPTEEA-------IIE 397
S EVE+++Y P + E A+VA WG+ PCAFV L K E + + E+ +IE
Sbjct: 455 SVEVENIIYKYPKVLETAVVAMPHPTWGETPCAFVVLEKGETNNEDREDKLVTKERDLIE 514
Query: 398 FCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+CR LPH+M + V+ DELPK GKI K LR+I +
Sbjct: 515 YCRENLPHFMCPRKVVFLDELPKNGNGKILKPKLRDIAKGL 555
>gi|389685417|ref|ZP_10176741.1| AMP-binding domain protein [Pseudomonas chlororaphis O6]
gi|388551070|gb|EIM14339.1| AMP-binding domain protein [Pseudomonas chlororaphis O6]
Length = 540
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/443 (43%), Positives = 278/443 (62%), Gaps = 20/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AA+++ P V+ DD V
Sbjct: 101 RLDAEAIAFMLAHGEAKVLIADREFHEVIHAAVAMLDQ----PPLVIDLDDPEYGEGQPV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W P+ EW +ALNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 157 SELDYEAFLAEGDPAFAWQWPDDEWQAIALNYTSGTTGNPKGVVYHHRGAYLNALGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ H VTH+CGA
Sbjct: 217 WAMGNHPVYLWTLPMFHCNGWCYPWTVTALAGVHVFLRRVDPQKILNLIREHQVTHLCGA 276
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 PIVLNALVNMPDSAKAAIDHPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW + W+ L +RA++K+RQGVR L + V P+T DGQ+ GEI R +
Sbjct: 337 LCAWHAAWDELPLEQRAQIKSRQGVRYPTLEGVMVADPKTLEPTPRDGQTIGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ ++ + WF+TGD+GV H DGY+EI+DR KD+IISGGENIS+ E+E
Sbjct: 397 VMKGYLKNPSATAEAF-EGGWFHTGDLGVTHPDGYVEIRDRLKDIIISGGENISTIELEG 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ E A+VA+ D+ WG+ PCAF++LK + ++ +E II FCR L + ++
Sbjct: 456 VLYRHPAVLEAAVVARPDEKWGETPCAFITLKAD-HQQVSEAQIIAFCREHLAGFKVPRT 514
Query: 412 VIIEDELPKTATGKIQKFVLREI 434
V+ +LPKT+TGKIQKFVLR++
Sbjct: 515 VVF-SQLPKTSTGKIQKFVLRDM 536
>gi|26990265|ref|NP_745690.1| acyl-CoA synthetase [Pseudomonas putida KT2440]
gi|24985214|gb|AAN69154.1|AE016549_3 AMP-binding domain protein [Pseudomonas putida KT2440]
Length = 540
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 281/448 (62%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AL+L P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHAVIEGALALLEH----PPLVVDVDDPEYGEGRAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 157 SQLDYEALLNEGDPEFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + ++PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD I ++I+ H V+H+CGA
Sbjct: 217 WAMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + ++ PV+ + +GA+PPA V+ E +G V+H+YGLTE G V
Sbjct: 277 PIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEQMGIKVTHTYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +W+ L+ ERAR+K+RQGVR L + V P+T V DG + GEI R +
Sbjct: 337 VCAWHDEWDALSLEERARIKSRQGVRYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ R WF+TGD+ V H+DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPEATAEAFR-GGWFHTGDLAVWHADGYIEIKDRLKDIIISGGENISTIEVED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHK 410
LY + A+ E A+VA+ D+ WG+ PCAFV+LK ++ T EA I +CR L + K
Sbjct: 456 ALYKHSAVLEAAVVARPDEKWGETPCAFVALK--PGREDTREADITSWCREHLAGFKVPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
+V+ ELPKT+TGKIQK+VLR+ A+
Sbjct: 514 TVVF-GELPKTSTGKIQKYVLRDRAKAL 540
>gi|167045698|gb|ABZ10345.1| putative AMP-binding enzyme [uncultured marine bacterium
HF4000_APKG2098]
Length = 542
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/440 (43%), Positives = 278/440 (63%), Gaps = 15/440 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN----TILPKPVLIHD-----D 55
RLD K V +L H+++K L VD Q + AL F I+ K + D +
Sbjct: 101 RLDSKTVGYILKHADAKALIVDRQFHGVVKKALESFGKKILIIDIVDKQADLKDSEKIGE 160
Query: 56 VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
+ S G N+ W +P+ EW ++LNYTSGTT +PKGVV+ HRG ++++ S W
Sbjct: 161 IEYESFLEKGDVNYVWKRPKDEWQAISLNYTSGTTGNPKGVVYHHRGSYLMSTGSAAAWN 220
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+PN+ FL+T+PMFH NGW Y W +A + IC+R + ++ +I H VTH GA +
Sbjct: 221 MPNRLNFLYTVPMFHCNGWCYPWTLAMLHARVICIRNIRAKEVFDLITEHKVTHFGGAPI 280
Query: 176 VLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
+LNML+S+P KPL V +LT+ A PP+ + + ++LGF V H YGLTET G ++ C
Sbjct: 281 ILNMLASAPKEEQKPLKHKVYVLTAAAPPPSIIFKKMKNLGFEVMHVYGLTETYGHILQC 340
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
AW +W+ L + E+A + ARQGVR L D+DV+ PET + DG++ GEI+ R +M
Sbjct: 341 AWNKEWDDLNEDEKADINARQGVRYPNLEDVDVMDPETMKPLPRDGKTIGEIMIRGNVVM 400
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY KD+E + M+ WF++GD+ V++ +GY++IKDRSKD+IISGGENISS E+E+ +
Sbjct: 401 KGYFKDKEATEKAMK-GGWFHSGDLAVMYPNGYIQIKDRSKDIIISGGENISSIEIENTV 459
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
+ +++ A+VA+ D+ WG+ PCAFV L E KK TEE II+FCR L + K ++
Sbjct: 460 AKHSSVSLAAVVAKPDEKWGEIPCAFVELAPE--KKATEEEIIKFCRETLAGFKIPKKIV 517
Query: 414 IEDELPKTATGKIQKFVLRE 433
ELPKT+TGKI+KF LR+
Sbjct: 518 F-GELPKTSTGKIKKFELRK 536
>gi|238007468|gb|ACR34769.1| unknown [Zea mays]
Length = 483
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/457 (44%), Positives = 287/457 (62%), Gaps = 26/457 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHDDVSATSSPT 63
R D VSVLL HSE+K+ V+ Q +A AL L + LP + + D S++S+
Sbjct: 21 RHDAAMVSVLLKHSEAKVFLVESQFHAVARDALRLLADAKDRLPLVITVSDPSSSSSTGD 80
Query: 64 VGHPN-------------------FKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
N F+ P E DP++LNYTSGTTS PKGV++ HRG F
Sbjct: 81 GRGSNDGSVAVAEYEALLRSAPRDFEIRWPADERDPISLNYTSGTTSRPKGVIYSHRGAF 140
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ T+++++ + PV+LWT+PMFH NGW W AA GGT++C+ V +++ I
Sbjct: 141 LNTLATVLVNEMATMPVYLWTVPMFHCNGWCMVWATAAQGGTSVCIGSVSPGVVFDHIVR 200
Query: 165 HGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
HGVT++ GA VL+ML+++P+ KPL R V+I T GA PP VL + + LGF V+H YG
Sbjct: 201 HGVTNMGGAPTVLSMLANAPAADRKPLPRRVRISTGGAPPPPQVLAKMDELGFDVAHGYG 260
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G +C WK +W+ L ERAR+KA QGV + ++ + P + ++ DG++
Sbjct: 261 LTETYGPATTCVWKPEWDALPPAERARMKALQGVAHAMVQEVAIKDPASMETLPSDGRAV 320
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE++ R ++M GY KD + MR W TGD+GV H +GY+++KDRSKD+IISGGE
Sbjct: 321 GEVMLRGNTVMGGYYKDAGATEEAMR-GGWLRTGDLGVRHPNGYIQLKDRSKDIIISGGE 379
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVESVL+ +PA+ + A+VA+ D WG+ PCAFV+L+ + T + II FCRAR
Sbjct: 380 NISSIEVESVLFGHPAVLDAAVVARPDDHWGEAPCAFVTLR--DGARATADDIIRFCRAR 437
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
LPHYMA ++V+ D LPKT+TGK QK++LRE A+
Sbjct: 438 LPHYMAPRTVVFSD-LPKTSTGKTQKYLLREKARAMG 473
>gi|117621371|ref|YP_856708.1| AMP-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562778|gb|ABK39726.1| AMP-binding protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 540
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/444 (44%), Positives = 282/444 (63%), Gaps = 25/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ + H++SK++ VD + L AL+L + +P+LI DD
Sbjct: 104 RLDAESMAFIFQHAQSKVVLVDREFGALVQKALALVEN-----QPLLIAIDDPLYREGEL 158
Query: 64 VGHPNFK------------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
V +++ W+ P+ EW ++LNYTSGTT +PKGVV+ HRG + V+++
Sbjct: 159 VSDLDYEAFLAEGSGDEPGWL-PQDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAVNNV 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W +P V+LWTLPMFH NGW + W +AA G +ICLR V IY + H V+H C
Sbjct: 218 LSWELPKHSVYLWTLPMFHCNGWCFPWTLAATAGVSICLRHVQAAAIYEALHEHKVSHFC 277
Query: 172 GALVVLNMLSSS-PSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
A +VLNML+++ P+ K LD P+K++T+GA+PPA V+ E++G V+H YGLTET G
Sbjct: 278 AAPIVLNMLNNADPALKRGLDHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V C + W T +RLKARQGV + +M V++P +G V DG++ GEIV R
Sbjct: 338 CVLCEPQRSWQGQDATTLSRLKARQGVASPLQGEMRVINPVSGEPVPQDGKTMGEIVLRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ S+ M + WF +GD+ V H DGY+EIKDRSKD+IISGGENISS EV
Sbjct: 398 NVVMKGYLKNPSASAEAMAEG-WFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +P ++EVA++A D+ WG+ PCAFV LK ++ T+ +I FCR ++ H+ A
Sbjct: 457 EDVLYRHPDVDEVAVIAMPDEKWGEVPCAFVKLK--EGRELTQAELIAFCREQMAHFKAP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K VI LPKT+TGK+QKF+LR+
Sbjct: 515 KRVIF-TPLPKTSTGKVQKFMLRQ 537
>gi|345872539|ref|ZP_08824472.1| o-succinylbenzoate--CoA ligase [Thiorhodococcus drewsii AZ1]
gi|343918787|gb|EGV29549.1| o-succinylbenzoate--CoA ligase [Thiorhodococcus drewsii AZ1]
Length = 544
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/443 (44%), Positives = 279/443 (62%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD V+ +L H+ES +L D + S + AL+ + +P++I DD S
Sbjct: 105 RLDASSVAFILEHAESNVLITDREMSSVVSKALAQMKT-----RPIVIDIDDPSFEGGEL 159
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G +F W P+ EW+ ++LNYTSGTT PKGVV+ HRG ++ VS+ +
Sbjct: 160 LGEMTYEQFLAEGDSDFDWKGPDDEWNAISLNYTSGTTGDPKGVVYHHRGAYLNAVSNAL 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +PN+ V+LWTLPMFH NGW + W +AAV G ++C+R V + +IK V H+CG
Sbjct: 220 SWGMPNRAVYLWTLPMFHCNGWCFPWTVAAVSGVSVCVRHVRAVHLMELIKQEKVDHLCG 279
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VL+ML P+ + L+ VK++T+GA PPA+V+ E +GF V+H YGLTET G
Sbjct: 280 APIVLSMLVGVPAELKEGLNHTVKVMTAGAPPPASVIQGMEEMGFDVTHVYGLTETYGPC 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V CAW W+ + ER+RLKARQGVR + V P T V DG++ GEI R
Sbjct: 340 VVCAWNDDWDDKSMQERSRLKARQGVRVPMQEGLMVGDPVTLKPVPRDGETIGEIFMRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + + + WF++GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 400 VVMKGYLKNPKTTRASFQ-GGWFHSGDLAVCHPDGYIEIKDRSKDIIISGGENISSIEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
L+ +P+I +VA+VA D+ WG+ PCAF+SL + + TEE ++ +CR + H+ K
Sbjct: 459 ETLFRHPSIQDVAVVAMSDEKWGEVPCAFISLIPD--AQMTEEEVVRYCRENMAHFKVPK 516
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
++ +D LP+T+TGK+QKF+LR+
Sbjct: 517 KIVFKD-LPRTSTGKVQKFILRQ 538
>gi|15215766|gb|AAK91428.1| At1g65890/F12P19_6 [Arabidopsis thaliana]
gi|16974331|gb|AAL31150.1| At1g65890/F12P19_6 [Arabidopsis thaliana]
Length = 578
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/461 (44%), Positives = 283/461 (61%), Gaps = 29/461 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS---NTILPKPVLIHD-----DV 56
RLD ++ +L H++ K+LF+ PLA L L S N LP + IH+ V
Sbjct: 97 RLDATSIAAILRHAKPKILFIYRSFEPLAREILQLLSSEDSNLNLPV-IFIHEIDFPKRV 155
Query: 57 SATSSP-----TVGHPN----FKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
S+ S G P + + E DP++LNYTSGTT+ PKGVV HRG ++ T
Sbjct: 156 SSEESDYECLIQRGEPTPLLLARMFCIQDEHDPISLNYTSGTTADPKGVVISHRGAYLST 215
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+S++I W + PV+LWTLPMFH NGW+++WG AA GGT++C+R V P IY I+ H V
Sbjct: 216 LSAIIGWEMGTCPVYLWTLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNV 275
Query: 168 THICGALVVLNMLSSSPSTKPLDR--PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
TH+C V N+L S R PV +LT G+ PPAA++ + + LGF V H+YGLTE
Sbjct: 276 THMCCVPTVFNILLKGNSLDLSHRSGPVHVLTGGSPPPAALVKKVQRLGFQVMHAYGLTE 335
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
G V+ C W+ +WN L + ++ LKARQG+ +GL ++DV + ET SV DG++ GEI
Sbjct: 336 ATGPVLFCEWQDEWNRLPENQQMELKARQGLSILGLTEVDVRNKETQESVPRDGKTMGEI 395
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
V + SIM GYLK+ + + + + W +GD+GV+H DG++EIKDRSKD+IISGGENIS
Sbjct: 396 VMKGSSIMKGYLKNPKATYEAFK-HGWLNSGDVGVIHPDGHVEIKDRSKDIIISGGENIS 454
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL-KWELSKKPTEEA-------IIE 397
S EVE+++Y P + E A+VA WG+ PCAFV L K E + + E+ +IE
Sbjct: 455 SVEVENIIYKYPKVLETAVVAMPYPTWGETPCAFVVLEKGETNNEDREDKLVTKERDLIE 514
Query: 398 FCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+CR LPH+M + V+ DELPK GKI K LR+I +
Sbjct: 515 YCRENLPHFMCPRKVVFLDELPKNGNGKILKPKLRDIAKGL 555
>gi|356521803|ref|XP_003529540.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 568
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/452 (45%), Positives = 278/452 (61%), Gaps = 26/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF--PSNTILPKPVLIHDDVSATSSP 62
RL+ V+ LL H + + VD + LA AL ++ + T P +++ D +
Sbjct: 105 RLNASTVAFLLGHCTAAAVIVDQEFFSLAEEALKIWSEKAKTFSPPLLIVISDENCDPKA 164
Query: 63 ----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
G P + W PE EW +AL YTSGTT+SPKGVV HRG +++
Sbjct: 165 LKYALGKGAIEYEDFLQSGDPEYAWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLM 224
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++S + W + V+LWTLPMFH NGW Y+W +AA+ GTNICLR+V +Y I +
Sbjct: 225 SLSGALIWGMTEGAVYLWTLPMFHCNGWCYTWTLAALCGTNICLRQVTAKAVYGAIAKYK 284
Query: 167 VTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
VTH C A VVLN L ++P+ PL V + T+GA+PP +VL GF V+H+YGL
Sbjct: 285 VTHFCAAPVVLNTLINAPAEDTILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGL 344
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
+ET G V CAWK +W +L +ARL ARQGVR IGL + VV+ +T V DG++ G
Sbjct: 345 SETYGPSVYCAWKPEWESLPPENQARLNARQGVRYIGLEGLAVVNTKTMEPVPADGKTVG 404
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R S+M GYLK+ + + N WF++GD+ V H DGY+EIKDRSKD+IISG EN
Sbjct: 405 EIVMRGNSVMKGYLKNPKANEETFA-NGWFHSGDLAVKHPDGYIEIKDRSKDIIISGAEN 463
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTE---EAIIEFCR 400
ISS E+E+ LY +P+I E A+VA+ D+ WG+ PCAFV+LK + K + E I++F R
Sbjct: 464 ISSVEIENTLYSHPSILEAAVVARADEKWGESPCAFVTLKPGVDKSNEQRIIEDILKFSR 523
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
A++P Y KSV+ LPKTATGKIQK +LR
Sbjct: 524 AKMPAYWVPKSVVF-GALPKTATGKIQKHILR 554
>gi|293337111|ref|NP_001169640.1| uncharacterized protein LOC100383521 [Zea mays]
gi|224030593|gb|ACN34372.1| unknown [Zea mays]
gi|414864657|tpg|DAA43214.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 559
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/457 (44%), Positives = 287/457 (62%), Gaps = 26/457 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHDDVSATSSPT 63
R D VSVLL HSE+K+ V+ Q +A AL L + LP + + D S++S+
Sbjct: 97 RHDAAMVSVLLKHSEAKVFLVESQFHAVARDALRLLADAKDRLPLVITVSDPSSSSSTGD 156
Query: 64 VGHPN-------------------FKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
N F+ P E DP++LNYTSGTTS PKGV++ HRG F
Sbjct: 157 GRGSNDGSVAVAEYEALLRSAPRDFEIRWPADERDPISLNYTSGTTSRPKGVIYSHRGAF 216
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ T+++++ + PV+LWT+PMFH NGW W AA GGT++C+ V +++ I
Sbjct: 217 LNTLATVLVNEMATMPVYLWTVPMFHCNGWCMVWATAAQGGTSVCIGSVSPGVVFDHIVR 276
Query: 165 HGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
HGVT++ GA VL+ML+++P+ KPL R V+I T GA PP VL + + LGF V+H YG
Sbjct: 277 HGVTNMGGAPTVLSMLANAPAADRKPLPRRVRISTGGAPPPPQVLAKMDELGFDVAHGYG 336
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G +C WK +W+ L ERAR+KA QGV + ++ + P + ++ DG++
Sbjct: 337 LTETYGPATTCVWKPEWDALPPAERARMKALQGVAHAMVQEVAIKDPASMETLPSDGRAV 396
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE++ R ++M GY KD + MR W TGD+GV H +GY+++KDRSKD+IISGGE
Sbjct: 397 GEVMLRGNTVMGGYYKDAGATEEAMR-GGWLRTGDLGVRHPNGYIQLKDRSKDIIISGGE 455
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVESVL+ +PA+ + A+VA+ D WG+ PCAFV+L+ + T + II FCRAR
Sbjct: 456 NISSIEVESVLFGHPAVLDAAVVARPDDHWGEAPCAFVTLR--DGARATADDIIRFCRAR 513
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
LPHYMA ++V+ D LPKT+TGK QK++LRE A+
Sbjct: 514 LPHYMAPRTVVFSD-LPKTSTGKTQKYLLREKARAMG 549
>gi|428164588|gb|EKX33608.1| hypothetical protein GUITHDRAFT_90688 [Guillardia theta CCMP2712]
Length = 540
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 198/443 (44%), Positives = 277/443 (62%), Gaps = 16/443 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP--------SNTILPK---PVLIH 53
RLD ++ +L HSE+ L D + +P AAL + ++ P P
Sbjct: 97 RLDPAAIAFILDHSETSFLITDTEFAPNVKAALEMIKRKISVIDICDSEAPNFNVPANRL 156
Query: 54 DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
D T G P+ P EWD +AL YTSGTT PKGVV HRG ++ ++S++I
Sbjct: 157 SDTDYEKLLTEGSPDGNIDGPLDEWDAIALGYTSGTTGDPKGVVTHHRGAYLNSLSNIIV 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + + +LWTLPMFH NGW + W +AAVGGT++CLRKV IY+ I HGV +CGA
Sbjct: 217 WDMGHHSRYLWTLPMFHCNGWCFPWTLAAVGGTSVCLRKVTAENIYNSIADHGVDRLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN + ++P S + VK++T+ A PP + L R + GF V+H YGLTET G V
Sbjct: 277 PIVLNTIINAPPESRRSFKHQVKVMTAAAPPPPSTLQRMQQQGFEVTHVYGLTETYGPAV 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C+WK +W+ L ++A++++RQGV L D++V+ PET V DGQ+ GE++FR
Sbjct: 337 ICSWKGEWDALPLEQQAKMRSRQGVNYHVLEDLEVLDPETLQPVPADGQTLGEVMFRGNV 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ +S +R WF++GD+ V+HSDGY+E+KDRSKDVIISGGENISS EVE
Sbjct: 397 VMKGYLKNPATTSKDLR-GGWFHSGDLAVMHSDGYIELKDRSKDVIISGGENISSIEVEG 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
++ +PA+ VA+VA+ D+ WG+ PCAFV LK EE + FCR + H+ K+
Sbjct: 456 IMTSHPAVEMVAVVARPDEKWGETPCAFVELKKGYDAS-VEEDLKNFCREHMAHFKVPKT 514
Query: 412 VIIEDELPKTATGKIQKFVLREI 434
+ + ELPKT+TGK+QKF LRE+
Sbjct: 515 FVFQ-ELPKTSTGKLQKFKLREL 536
>gi|406677187|ref|ZP_11084372.1| hypothetical protein HMPREF1170_02580 [Aeromonas veronii AMC35]
gi|404625501|gb|EKB22318.1| hypothetical protein HMPREF1170_02580 [Aeromonas veronii AMC35]
Length = 540
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/443 (44%), Positives = 277/443 (62%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ + H++SK++ VD + + AL L + V+ DD +
Sbjct: 104 RLDAESMAFIFQHAQSKVVLVDREFGLVVRKALELLEHQPL----VIAIDDPLYREGALI 159
Query: 65 GHPNFK------------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+++ W+ PE EW ++LNYTSGTT +PKGVV+ HRG + +++++
Sbjct: 160 SDLDYEQFLAQGSGDEPGWL-PEDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNVL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P PV+LWTLPMFH NGW + W +A G ++CLR V IY + H V+H C
Sbjct: 219 SWELPKHPVYLWTLPMFHCNGWCFPWTLAVTAGVSVCLRHVQATAIYGALHEHKVSHFCA 278
Query: 173 ALVVLNMLSSS-PSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML+++ P+ K LD P+K++T+GA+PPA V+ E++G V+H YGLTET G
Sbjct: 279 APIVLNMLNNADPALKRGLDHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPC 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V C + W T +RLKARQGV + +M VVHP +G V DG++ GEIV R
Sbjct: 339 VLCEPQRSWQGQDATALSRLKARQGVASPLQGEMRVVHPVSGEPVAKDGKTMGEIVLRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ S+ M + WF +GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 399 VVMKGYLKNPAASAEAMAEG-WFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P ++E A++A D+ WG+ PCAFV LK ++ T+ +I FCR ++ H+ A K
Sbjct: 458 DVLYRHPDVDEAAVIAMPDEKWGEVPCAFVKLK--EGRETTQAELIAFCREQMAHFKAPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+I LPKT+TGK+QKFVLR+
Sbjct: 516 RIIF-TPLPKTSTGKVQKFVLRK 537
>gi|115361247|ref|YP_778384.1| AMP-dependent synthetase/ligase [Burkholderia ambifaria AMMD]
gi|115286575|gb|ABI92050.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
Length = 545
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/439 (46%), Positives = 267/439 (60%), Gaps = 14/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL---ALAALSLFPSNTILPKPVLIHDDVSATSS 61
RLD ++ +L H ++KLL D + SP ALA L + P D+
Sbjct: 106 RLDADTIAFILDHGDAKLLITDREFSPTVKKALARLGRVIQVIDIDDPQCGEGDLLGEKD 165
Query: 62 -----PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
H F PE EW ++LNYTSGTT +PKGVV+ HRG ++ VS+ + W +
Sbjct: 166 YEALLQEATHTEFSVAMPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWHL 225
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+LWTLPMFH NGW + W MA V GT++ LR I + I+ VTH C A VV
Sbjct: 226 DEDTTYLWTLPMFHCNGWCFPWTMALVAGTSVFLRHTRAERILAAIRTEAVTHFCAASVV 285
Query: 177 LNML-SSSPSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
LNM+ +++P K + VK++T GA PPA+V+ E +G+ V+H+YGLTE+ G VV C
Sbjct: 286 LNMINNAAPELKAGIRHRVKVMTGGAPPPASVIAGMECMGWEVTHAYGLTESYGPVVQCV 345
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ WN L +ARLKARQGVR L M V P+T V DGQ+ GE+ R ++M
Sbjct: 346 WRESWNALELDAKARLKARQGVRGPVLEAMMVARPDTLEPVPKDGQTLGEVFLRGNNVMK 405
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ + + WF+TGD+GV H DGYLEIKDRSKD+IISGGENISS E+E +LY
Sbjct: 406 GYLKNPDATVEAF-SGGWFHTGDLGVWHPDGYLEIKDRSKDIIISGGENISSIEIEDILY 464
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ E A+VA+ D WG+ PCAF++LK + TE II FCR RL H+ K+++
Sbjct: 465 SHPAVLEAAIVARPDDKWGETPCAFITLKDD--SVVTEADIIAFCRERLAHFKVPKTIVF 522
Query: 415 EDELPKTATGKIQKFVLRE 433
LPKTATGKIQKF LRE
Sbjct: 523 S-PLPKTATGKIQKFNLRE 540
>gi|217074538|gb|ACJ85629.1| unknown [Medicago truncatula]
gi|388493070|gb|AFK34601.1| unknown [Medicago truncatula]
Length = 566
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/452 (45%), Positives = 282/452 (62%), Gaps = 26/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT-ILPKPVLI------HDDVS 57
RL+ ++ LL H + ++ VD + LA AL ++ T P+LI D S
Sbjct: 103 RLNASTIAFLLGHCTASVVIVDQEFFSLAEEALKIWSDKTKTFKSPILIVIGDENCDPKS 162
Query: 58 ---ATSSPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
A S V G P + W PE EW +AL YTSGTT+SPKGVV HRG +++
Sbjct: 163 LRYALSKGAVEYEDFLRSGDPEYNWKPPEDEWQSIALGYTSGTTASPKGVVLHHRGAYLM 222
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++S + W + V+LWTLPMFH NGW Y+W +AA+ GTNICLR+V +Y I +
Sbjct: 223 SLSGALIWGMNEGAVYLWTLPMFHCNGWCYTWTLAALFGTNICLRQVSAKAVYEAIVKYK 282
Query: 167 VTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
VTH C A VVLN + ++P+ + PL V + T+GA+PP +VL GF V+H+YGL
Sbjct: 283 VTHFCAAPVVLNSIINAPAEETILPLPHVVHVNTAGAAPPPSVLSGMSERGFRVTHTYGL 342
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
+ET G V CAWK +W+ L RARL ARQGV+ I L +DVV+ +T V DG++ G
Sbjct: 343 SETYGPSVYCAWKPEWDPLPPESRARLHARQGVKYIALEGLDVVNTKTMQPVPADGKTVG 402
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R ++M GYLK+ + + N W+++GD+ V H DGY+EIKDRSKD+IISG EN
Sbjct: 403 EIVMRGNAVMKGYLKNPKANEESFA-NGWYHSGDLAVKHPDGYIEIKDRSKDIIISGAEN 461
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTE---EAIIEFCR 400
ISS EVE+ LY +PAI E ++VA+ D+ WG+ PCAFV+LK + + + E I++FCR
Sbjct: 462 ISSVEVENALYSHPAILETSVVARPDEKWGESPCAFVTLKPGVDRSNEQRLVEDILKFCR 521
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
++P Y KSV+ LPKTATGK+QK +LR
Sbjct: 522 TKMPTYWVPKSVVF-GPLPKTATGKVQKHLLR 552
>gi|346642882|ref|YP_259269.2| acyl-CoA synthetase [Pseudomonas protegens Pf-5]
gi|341580027|gb|AAY91436.2| AMP-binding domain protein [Pseudomonas protegens Pf-5]
Length = 540
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/445 (43%), Positives = 276/445 (62%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L H E+K+L D + + AA+++ L P L+ D
Sbjct: 101 RLDAEAIAFMLAHGEAKVLIADREFHEVIHAAVAM------LDHPPLVIDLDDPEYGEGQ 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G P F W P+ EW +ALNYTSGTT +PKGVV+ HRG ++ + +
Sbjct: 155 PVSDLDYEAFLAEGDPEFAWQWPDDEWQAIALNYTSGTTGNPKGVVYHHRGAYLNALGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I +I+ H VTH+C
Sbjct: 215 MTWAMGNHPVYLWTLPMFHCNGWCYPWTVTALAGVHVFLRRVDPQKILDLIREHQVTHLC 274
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P T +D PV + +GA+PPA V+ E +G V+H YGLTE G
Sbjct: 275 GAPIVLNALVNMPDTAKAAIDHPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW + W+ L +RA++K+RQGVR L + V P+T DGQ+ GEI R
Sbjct: 335 VTLCAWHAAWDELPLEQRAQIKSRQGVRYPTLEGVMVADPKTLEPTPRDGQTIGEIFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ ++ + WF+TGD+GV H DGY+EI+DR KD+IISGGENIS+ E+
Sbjct: 395 NTVMKGYLKNPTATAEAF-EGGWFHTGDLGVTHPDGYVEIRDRLKDIIISGGENISTIEL 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ E A+VA+ D+ WG+ PCAF++LK + + E II FCR L +
Sbjct: 454 EGVLYRHPAVLEAAVVARPDEKWGETPCAFITLKAD-HQDVREAEIIAFCREHLAGFKVP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLREI 434
++V+ LPKT+TGKIQKFVLR++
Sbjct: 513 RTVVF-SPLPKTSTGKIQKFVLRDM 536
>gi|356499054|ref|XP_003518359.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
ligase-like [Glycine max]
Length = 542
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/449 (47%), Positives = 277/449 (61%), Gaps = 21/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKP---VLIHDDVSATSS 61
RLD ++ +L HSE+K+LFVDY+ P A AL L + P +LI D S TS
Sbjct: 69 RLDANNIATILRHSEAKVLFVDYEYVPKAKEALELLIAKKYHSSPPLLILIDDINSPTSI 128
Query: 62 PTV----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
V NF + EW P+ALNYTSGTTS+ KGVV+ HRG ++ + +
Sbjct: 129 QFVELEYEQLVYNDDSNFFPEKIHDEWAPIALNYTSGTTSASKGVVYSHRGAYLSSSTLS 188
Query: 112 ID--WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+ W + +PV+LWTLPMF GW+++WG+AA GTN+CLR V IY I H VTH
Sbjct: 189 LILGWEMSTEPVYLWTLPMFRCYGWTFTWGVAARRGTNVCLRNVSAYDIYKNISLHHVTH 248
Query: 170 ICGALVVLNM-LSSSPSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
C A +V N+ L + PS + + V+ILT GA P +++ + ESLGF V H+YGLTE
Sbjct: 249 XCCAPIVFNIILEAKPSERFEIKSIVEILTGGAPSPPSLIEKIESLGFHVMHAYGLTEAT 308
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G V+ C W+ WN L E+A+LKAR GV + L D+DV +T SV DG++ GEIV
Sbjct: 309 GSVLVCEWQQHWNQLPKDEQAQLKARLGVIILTLEDVDVKKVDTMESVSRDGKTMGEIVL 368
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R SIM GY KD + S+L + WF+TGD GV+H DGYLEIKDRSK VIISGGENISS
Sbjct: 369 RGSSIMKGYFKDLD-STLKAFSDGWFHTGDAGVIHKDGYLEIKDRSKYVIISGGENISSV 427
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP---TEEAIIEFCRARLP 404
++E VLY +P + E A+VA WG+ PCAFV LK K TE +I +CR +P
Sbjct: 428 DLEYVLYKHPRVLEAAVVAMPHPRWGESPCAFVVLKKFXGDKMNDLTEADLIGYCRKNMP 487
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+M K V +ELPKT+TGKI+KF LR+
Sbjct: 488 PFMVPKVVKFVEELPKTSTGKIKKFELRD 516
>gi|357481325|ref|XP_003610948.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355512283|gb|AES93906.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 548
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/437 (43%), Positives = 287/437 (65%), Gaps = 15/437 (3%)
Query: 7 DHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-PSNTILPKPVLI--HDDVSATSSPT 63
D VS+LL+H ++K+LFVD+Q +A AL + S T LP VLI D+ ++ SS T
Sbjct: 99 DSSMVSLLLNHCDAKILFVDHQLFDIAKGALEILSKSTTKLPILVLILDSDENTSVSSNT 158
Query: 64 V--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
+ G +F+ +P+ E D ++++YTSGTTS+PKGV+ HRG ++ +++++I
Sbjct: 159 LIYENLIAEGKLDFEVRRPKDECDTISISYTSGTTSTPKGVIFSHRGAYLNSLATIIINE 218
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+ + V+LW +PM+H NGW W +AA GGTN+CLR V I+ I H VTH+ GA
Sbjct: 219 MKSTSVYLWCVPMYHCNGWCVPWSIAAQGGTNVCLRNVTDKDIFDNIFKHNVTHMGGAPA 278
Query: 176 VLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+LNML +SP KPL V +++ GA PP + E LGF V+H+YG+TET G C W
Sbjct: 279 LLNMLINSPIRKPLSGKVVVMSGGAPPPPDIFSSAEELGFHVTHAYGMTETYGPASICTW 338
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
K +W +L +A+++ RQGV+ +G+ ++D+ P T SV D ++ GE++FR ++M G
Sbjct: 339 KPEWASLPPDAQAKMRVRQGVQHVGMDELDIKDPATMKSVPADAKTIGEVMFRGNNVMNG 398
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLKD + + + WF TGD+GV H+DGY+E+ DR+ DV+ISGGENIS+ ++E V++
Sbjct: 399 YLKDLKATQDAF-EGGWFRTGDMGVKHTDGYIEVTDRATDVVISGGENISTIQLEGVIFS 457
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ E A+V + D++WG+ PCAFV LK + TEE II+ C+ LP +MA ++V+
Sbjct: 458 HPAVFEAAVVGRPDEYWGETPCAFVKLKEGYNA--TEEEIIQLCQKHLPSFMAPQTVVFG 515
Query: 416 DELPKTATGKIQKFVLR 432
D LPKT+TGK QK+VLR
Sbjct: 516 D-LPKTSTGKTQKYVLR 531
>gi|406835433|ref|ZP_11095027.1| acyl-CoA synthetase [Schlesneria paludicola DSM 18645]
Length = 549
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/440 (42%), Positives = 275/440 (62%), Gaps = 14/440 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H ++K+L D + S AALSL + I+D + ++
Sbjct: 108 RLDAAAIAFMLEHGDAKILITDREYSTTIEAALSLLKEKGRELLVIDINDPEYTGAGKSL 167
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +F P EWD +ALNYTSGTT +PK VV+ HRG +++ + +L+
Sbjct: 168 GELDYEAFLATGDADFAPTAPAHEWDAIALNYTSGTTGNPKAVVYHHRGAYLLAMGNLLA 227
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + PV+LWTLPMFH NGW + W ++AV GT++CLRKVD I+ I H VTH+CGA
Sbjct: 228 WNMTAAPVYLWTLPMFHCNGWCFPWTLSAVCGTHVCLRKVDSAAIFRAISEHRVTHLCGA 287
Query: 174 LVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
+VLN+L ++P + ++I+T+ ++PP++V+ E +GF V+H YGLTE G C
Sbjct: 288 PIVLNLLVNAPEKVRFEHTIEIMTAASAPPSSVIAAMEGMGFHVTHVYGLTEVYGPATVC 347
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
W +W+ L ERARLK+RQGV L + V P T DG++ GE++ R +M
Sbjct: 348 DWHPEWDQLPLEERARLKSRQGVNYAVLEGLMVADPTTMEPCPADGKTLGEVMMRGNIVM 407
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GYLK+++ + R WF+TGD+ V H DGY+E+KDRSKD+II+GGEN+S+ EVE L
Sbjct: 408 KGYLKNRQATEEAFR-GGWFHTGDLAVTHPDGYIELKDRSKDIIITGGENVSTIEVEDAL 466
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +PA+ +VA+VA+ D+ WG+ PCAF+ LK + ++ T + II FCR ++ + K+V+
Sbjct: 467 YKHPAVMDVAVVARPDEKWGETPCAFICLKPD-AQATTSQEIIAFCRQQMAGFKVPKTVV 525
Query: 414 IEDELPKTATGKIQKFVLRE 433
LP+T+TGKIQK VLR+
Sbjct: 526 F-GPLPRTSTGKIQKHVLRD 544
>gi|424743211|ref|ZP_18171524.1| AMP-binding enzyme [Acinetobacter baumannii WC-141]
gi|422943472|gb|EKU38488.1| AMP-binding enzyme [Acinetobacter baumannii WC-141]
Length = 545
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/442 (45%), Positives = 276/442 (62%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+ESK+L VD + LA ALSL P I+ + + DD + +
Sbjct: 101 RLDAKTIAFMLEHAESKVLLVDPEFVNLAREALSLIPDQHIIV--IDVADDEYEGENQFI 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWIAQGDINFTWHLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAEHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K D V+++ +GA+PP A++ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQTNFDHHVEVMVAGAAPPVAIIEGMRNMGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA +S WN L+ E+A+L +RQGV M V+ PET V +DGQ+ GEI+FR
Sbjct: 339 LCASQSGWNELSIAEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGQTMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPQATQEAFA-GGWFHTGDLAVFHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D W + PCAF+ LK + T E II C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDARWQEVPCAFIELK--MGATATPEEIIAHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|395652300|ref|ZP_10440150.1| acyl-CoA synthetase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 540
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 277/445 (62%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L H E+K+L D + + AA+ + L P L+ D
Sbjct: 101 RLDAEAIAFMLAHGEAKVLIADREFHDVVHAAIGM------LDHPPLVIDVDDPEYGEGQ 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G P+F W PE EW ++LNYTSGTT +PKGVV+ HRG ++ ++ +
Sbjct: 155 PVSDLDYEAFLAEGDPDFAWQWPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I H VTH+C
Sbjct: 215 MIWAVGNHPVYLWTLPMFHCNGWCYPWIITALAGVHVFLRRVDPQKILNLIHEHQVTHLC 274
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P + +D PV + +GA+PPA V+ E +G V H YGLTE G
Sbjct: 275 GAPIVLNALVNMPDSAKAAIDHPVNAMVAGAAPPAKVIGAVEEMGIKVIHVYGLTEVYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW S+W+ L ERA++KARQGVR L + V P+T HDG + GEI R
Sbjct: 335 VTLCAWHSEWDELPLDERAQIKARQGVRYPTLEGVMVADPKTLEPTPHDGHTIGEIFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ ++ + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ E+
Sbjct: 395 NTVMKGYLKNPTATAEAF-EGGWFHTGDLAVTHPDGYVEIRDRLKDIIISGGENISTIEL 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PAI E A+VA+ D+ WG+ PCAFV+LK + + E +I FCR L +
Sbjct: 454 EGVLYRHPAILEAAVVARPDEKWGETPCAFVTLKAD-HQNIREADVISFCREHLAGFKVP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLREI 434
++V+ +LPKT+TGKIQKF+LR++
Sbjct: 513 RTVVFT-QLPKTSTGKIQKFMLRDM 536
>gi|325277762|ref|ZP_08143323.1| acyl-CoA synthetase [Pseudomonas sp. TJI-51]
gi|324097100|gb|EGB95385.1| acyl-CoA synthetase [Pseudomonas sp. TJI-51]
Length = 540
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/443 (44%), Positives = 280/443 (63%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + + AAL+L P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHTVIAAALALLEH----PPLVVDVDDPEYGEGRAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 157 STLDYEALLAEGDPAFAWDWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAIGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + ++PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD + ++I+ H V+H+CGA
Sbjct: 217 WAMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKVLNLIREHRVSHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + ++ PV+ + +GA+PPA V+ E +G V+H+YGLTE G V
Sbjct: 277 PIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEQMGIKVTHTYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW +W+ L ERA++KARQGVR L + V P++ V DG + GEI R +
Sbjct: 337 VCAWHEEWDALTLEERAQIKARQGVRYPTLDGLMVADPQSLEPVPRDGNTLGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ R WF+TGD+ V H+DGY+EIKDR KD+IISGGENIS+ EVE
Sbjct: 397 VMKGYLKNPEATAEAFR-GGWFHTGDLAVWHADGYVEIKDRLKDIIISGGENISTIEVED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHK 410
LY +PA+ E A+VA+ D+ WG+ PCAFV+LK ++ T EA I +CR L + K
Sbjct: 456 ALYKHPAVLEAAVVARPDEKWGETPCAFVALK--PGREDTREADISSWCREHLAGFKVPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+V+ ELPKT+TGKIQK++LR+
Sbjct: 514 TVVF-GELPKTSTGKIQKYLLRD 535
>gi|169634343|ref|YP_001708079.1| acyl-CoA synthetase [Acinetobacter baumannii SDF]
gi|169153135|emb|CAP02214.1| putative AMP-dependent synthetase/ligase [Acinetobacter baumannii]
Length = 542
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/442 (45%), Positives = 283/442 (64%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK E S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTEASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|226508348|ref|NP_001147480.1| LOC100281089 [Zea mays]
gi|195611660|gb|ACG27660.1| AMP-binding protein [Zea mays]
gi|238011192|gb|ACR36631.1| unknown [Zea mays]
gi|413955967|gb|AFW88616.1| putative AMP-dependent synthetase and ligase superfamily protein
[Zea mays]
Length = 582
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/456 (44%), Positives = 278/456 (60%), Gaps = 30/456 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF--PSNTILPKPVLIHDDVSATSSP 62
RL+ + ++ LL HS ++++ VD + LA +L + + +P ++ T P
Sbjct: 115 RLNAETIAFLLEHSVAEVVMVDQEFCTLAEESLKIIGKKKTSAFRRPPILIVIGDPTCDP 174
Query: 63 T------------------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
G P F W P+ EW +AL YTSGTTSSPKGVV HRG +
Sbjct: 175 KSLQHALGKGAIEYEEFLKTGDPEFSWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAY 234
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
++ +S I W +P V+LWTLPMFH NGW Y+W +AA GT+ICLR+V IY I
Sbjct: 235 LMALSVAIVWGMPEGAVYLWTLPMFHCNGWCYTWALAAFCGTSICLRQVSTKAIYEGITK 294
Query: 165 HGVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSY 221
GVTH C A VVLN L ++P+++ PL R V + +GA+P ++L GF V+H+Y
Sbjct: 295 QGVTHFCAAPVVLNNLINAPASETFLPLPRVVSVNVAGAAPTPSLLGALSIRGFRVTHTY 354
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQS 281
GL+ET G CAWK +W+ L ER+RL RQGVR I + +DVV P+T V DG+S
Sbjct: 355 GLSETYGPSTVCAWKPEWDELPLEERSRLHCRQGVRYIAMEGLDVVDPKTMAPVPADGKS 414
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GEIV R ++M GYLK+ ++ W+++GD+GV H DGY+E++DR KDVIISGG
Sbjct: 415 YGEIVLRGNAVMKGYLKNPRANAEAF-AGGWYHSGDLGVKHPDGYVEVRDRMKDVIISGG 473
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-----II 396
ENISS EVE VL +PA+ EV++VA+ D+ WG+ PCAFV+LK + ++EA I+
Sbjct: 474 ENISSLEVEKVLCAHPAVLEVSVVARADERWGESPCAFVTLKDGAAADGSDEAALANDIM 533
Query: 397 EFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
FCR R+P Y KSVI LPKTATGKI+K LR
Sbjct: 534 RFCRERMPGYWVPKSVIF-GPLPKTATGKIKKHELR 568
>gi|358637272|dbj|BAL24569.1| acetyl-CoA synthetase [Azoarcus sp. KH32C]
Length = 546
Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust.
Identities = 202/444 (45%), Positives = 269/444 (60%), Gaps = 21/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL---ALAALSLFPS---------NTILPKPVLI 52
RLD V +L H+ S++L D + + L ALA L P+ + +P L
Sbjct: 102 RLDAASVGFILGHARSRILIADAEYAALVEQALAGLEARPTVIGIADVGQSPACARPPL- 160
Query: 53 HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D G P F W P EW +ALNYTSGTT +PKGVV+ HRG ++ + + +
Sbjct: 161 -GDYEYEDFLAGGDPGFAWTLPADEWATIALNYTSGTTGAPKGVVYHHRGAYLNAMGNAL 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+++ V+LWTLPMFH NGWS++W + GGT++CLR+V+ ++ +I H VTH+CG
Sbjct: 220 AFQLSPDSVYLWTLPMFHCNGWSHTWAVTLAGGTHVCLRRVEAAAVFDLIARHRVTHLCG 279
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VVLNMLS +P +P PV I T GA+PP AV+ R E++GF V+H YGLTET G
Sbjct: 280 APVVLNMLSHAPERPAQPFRPPVAIATGGAAPPGAVIERMEAMGFRVTHLYGLTETYGPA 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAW+ QW L R ARQGV D+ V+ +G + DG S GEI R
Sbjct: 340 ALCAWQPQWAALDLQSRTARLARQGVPIHTQEDVVVLDRNSGEPIPCDGNSIGEICIRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYL + + WF+TGD+ VVH+DGY+EIKDR+KDVIISGGENIS+ EVE
Sbjct: 400 TVMKGYLDNATATEDAF-AGGWFHTGDLAVVHADGYIEIKDRAKDVIISGGENISTLEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAH 409
LY +P + E A+VA+ D+ WG+ PCAFV+LK P EA +I +CR L H+
Sbjct: 459 EALYRHPLVLEAAVVARPDEKWGETPCAFVTLK--PGTAPISEADLIAWCREHLAHFKCP 516
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
++V+ D LPKTATGKIQKF LRE
Sbjct: 517 RTVVFAD-LPKTATGKIQKFQLRE 539
>gi|399155937|ref|ZP_10756004.1| acyl-CoA synthetase [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 540
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 277/442 (62%), Gaps = 21/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
R++ + ++ + H+E+K+L D + P ALS + + V+ DD S +
Sbjct: 102 RMEAETLANIFEHAETKVLLTDREFFPQIKVALSKVKRDIL----VIDIDDPETDSGEYL 157
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F+ V PE +W ++LNYTSGTT PKGVV+ RG +++ +++
Sbjct: 158 GMLEYEAFLSEGDPEFEAVLPEDDWQAVSLNYTSGTTGIPKGVVYHTRGAYLLATGNVLA 217
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P++PV+LWTLPMFH NGW + W + +GGT++CLRKV IY+ I H VTH CGA
Sbjct: 218 WEMPHRPVYLWTLPMFHCNGWCFPWTITMLGGTHVCLRKVTAKNIYNSIAEHHVTHFCGA 277
Query: 174 LVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V+NM+S++P + + P V+I+T+ A PP V+ + E GF V+H YGLTE G V
Sbjct: 278 PIVMNMISNAPKEEQRELPHRVEIMTAAAPPPPTVIAQMEEAGFNVTHVYGLTEVYGPAV 337
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+ WN T +A+LK RQGVR L + V +PET V DG++ GE++ +
Sbjct: 338 VCEWQEAWNEKDKTTQAQLKGRQGVRYHVLEGLTVANPETLEPVPADGETMGEVLMQGNI 397
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GY K+ + ++ WF++GDIGV+H DGY+E+KDRSKD+IISGGENISS E+E+
Sbjct: 398 VMKGYFKNPKATAQAFA-GGWFHSGDIGVIHPDGYIELKDRSKDIIISGGENISSVEIEN 456
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY I E A+VA+ D+ WG+ PCAFVSLK S E+ +IEFCR +L + K
Sbjct: 457 VLYQQEDILEAAVVARPDEKWGEVPCAFVSLKTGCSL--NEQKVIEFCRTKLSGFKIPKY 514
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGKI+K +LRE
Sbjct: 515 VVF-CELPKTSTGKIRKSILRE 535
>gi|152987190|ref|YP_001346286.1| acyl-CoA synthetase [Pseudomonas aeruginosa PA7]
gi|452877421|ref|ZP_21954711.1| acyl-CoA synthetase [Pseudomonas aeruginosa VRFPA01]
gi|150962348|gb|ABR84373.1| probable AMP-binding enzyme [Pseudomonas aeruginosa PA7]
gi|452185832|gb|EME12850.1| acyl-CoA synthetase [Pseudomonas aeruginosa VRFPA01]
Length = 540
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 273/446 (61%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + ++ +L H E+K+L DY+ + AA+ + ++ V ++D P
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDYEFHEVIHAAIGMLDHPPLV---VDVNDPEYGEGRPVG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P F W P EW ++LNYTSGTT +PKGVV+ HRG ++ + + + W
Sbjct: 158 ELDYEALLAEGDPQFAWEWPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ PV+LWTLPMFH NGW Y W + A+ G ++CLR+VD I ++I+ H V+H+CGA
Sbjct: 218 SMGQHPVYLWTLPMFHCNGWCYPWTVTALAGVHVCLRRVDPQKILTLIREHQVSHLCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 278 IVLNALINMPDSAKAAIDHPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +W+ L RA +K+RQGVR L + V P+T V DGQS GEI R ++
Sbjct: 338 CAWHGEWDELPLERRAAIKSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ E+E V
Sbjct: 398 MKGYLKNPSATEEAFA-GGWFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGV 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D+ WG+ PCAF++LK + + E I+ FCR L + ++V
Sbjct: 457 LYRHPAVLEAAVVARPDEKWGETPCAFITLKSD-HQGIAESEIVAFCREHLAAFKIPRTV 515
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ ELPKT+TGKIQK+VLRE A+
Sbjct: 516 VF-SELPKTSTGKIQKYVLREWAAAL 540
>gi|356529030|ref|XP_003533100.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Glycine max]
Length = 571
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/457 (44%), Positives = 286/457 (62%), Gaps = 31/457 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKP---VLIHDD------ 55
RL+ ++ LL HS + + VD + +A +L ++ + KP ++I DD
Sbjct: 103 RLNAPAIAFLLAHSSAVAVIVDQEFFTVAEESLKIWSEKSKSFKPPILIVIGDDENCHPK 162
Query: 56 --VSATSSPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
A + V G P FKW P+ EW +AL YTSGTT+SPKGVV HRG ++
Sbjct: 163 ALTHALAKGAVEYEKFLESGDPEFKWKPPQDEWQSIALGYTSGTTASPKGVVLHHRGAYL 222
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+++S + W + V+LWTLPMFH NGW Y W +AA+ GTNICLR+V +Y+ I +
Sbjct: 223 MSLSGALHWGMNEGAVYLWTLPMFHCNGWCYPWTLAALCGTNICLRQVTAKAVYAAIAKY 282
Query: 166 GVTHICGALVVLN-MLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
VTH C A VVLN ++++SP PL V + T+GA+PP +V+ GF V+H+YG
Sbjct: 283 KVTHFCAAPVVLNSIVNASPEEAILPLPHVVHVNTAGAAPPPSVIGAMSERGFRVTHTYG 342
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W +L +R+RL ARQGVR I L ++V++ ET V DG S
Sbjct: 343 LSETYGPSTICAWKPEWESLPIEQRSRLSARQGVRYIALEGLEVMNTETMKPVPADGASV 402
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+++ + D WF++GD+ V H DGY+EIKDRSKD+IISGGE
Sbjct: 403 GEIVMRGNAVMKGYLKNRKANMEAFADG-WFHSGDLAVKHPDGYIEIKDRSKDIIISGGE 461
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK-------WELSKKPTEEAI 395
NISS EVE+VL+ +PA+ E ++VA+ D+ WG+ PCAFV+LK ++K E I
Sbjct: 462 NISSVEVENVLFSHPAVLEASVVARPDEKWGESPCAFVTLKPAGMDGAASTNEKILAEDI 521
Query: 396 IEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
++FCR+++P Y KSV+ LPKTATGK QK +LR
Sbjct: 522 VKFCRSKMPAYWVPKSVVF-GPLPKTATGKTQKQLLR 557
>gi|421157821|ref|ZP_15617160.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 25324]
gi|404550230|gb|EKA58997.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 25324]
Length = 540
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/446 (43%), Positives = 273/446 (61%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + ++ +L H E+K+L DY+ + AA+ + ++ V ++D P
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDYEFHEVIHAAIGMLDHPPLV---VDVNDPEYGEGRPVG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P F W P EW ++LNYTSGTT +PKGVV+ HRG ++ + + + W
Sbjct: 158 ELDYEALLAEGDPQFAWEWPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ PV+LWTLPMFH NGW Y W + A+ G ++CLR+VD + ++I+ H V+H+CGA
Sbjct: 218 SMGQHPVYLWTLPMFHCNGWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 278 IVLNALINMPDSAKAAIDHPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +W+ L RA +K+RQGVR L + V P+T V DGQS GEI R ++
Sbjct: 338 CAWHGEWDALPLERRAAIKSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ E+E V
Sbjct: 398 MKGYLKNPSATEEAFA-GGWFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGV 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D+ WG+ PCAF++LK + + E I+ FCR L + ++V
Sbjct: 457 LYRHPAVLEAAVVARPDEKWGETPCAFITLKSD-HQGLAESEIVAFCREHLAAFKIPRTV 515
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ ELPKT+TGKIQK+VLRE A+
Sbjct: 516 VF-SELPKTSTGKIQKYVLREWAAAL 540
>gi|425744206|ref|ZP_18862266.1| AMP-binding enzyme [Acinetobacter baumannii WC-323]
gi|425491594|gb|EKU57875.1| AMP-binding enzyme [Acinetobacter baumannii WC-323]
Length = 547
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/442 (44%), Positives = 280/442 (63%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+ESK+L VD + +A AL L P ++ + + D +
Sbjct: 101 RLDAKTIAFMLEHAESKVLLVDPEFREVAAEALKLVPQEIVV---IDVFDSEFEGEQIAI 157
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +P F+W+ P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 158 GQYEYESWLAQGNPEFEWLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 217
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLR+VD +I+ I + V + CGA
Sbjct: 218 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRRVDPVLIFKYIAQYKVDYFCGA 277
Query: 174 LVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+ML ++PS + D V+++ +GA+PP A++ LG V+H YGLTET G
Sbjct: 278 PIVLSMLINAPSEQRTSFDHHVEVMVAGAAPPVAIIEGMHHLGVNVNHVYGLTETYGPSA 337
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ WN L+ E+A+L +RQGV M V+ P+T V +DGQ+ GEI+FR
Sbjct: 338 LCASQAGWNDLSIQEQAQLHSRQGVPYPLQDSMRVLDPKTMQPVPNDGQTMGEIMFRGNI 397
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 398 VMKGYLKNPEATQEAFK-GGWFHTGDLAVSHPDGYAKITDRSKDIIISGGENISSLEVED 456
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK + P E II C+ +L + K
Sbjct: 457 VLYRHPAVLTAAVVAKPDQRWQEVPCAFIELKQGATATPEE--IIAHCQQQLARFKVPKD 514
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 515 VVIA-EIPKTSTGKLQKFILRE 535
>gi|242037045|ref|XP_002465917.1| hypothetical protein SORBIDRAFT_01g048080 [Sorghum bicolor]
gi|241919771|gb|EER92915.1| hypothetical protein SORBIDRAFT_01g048080 [Sorghum bicolor]
Length = 477
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/451 (45%), Positives = 278/451 (61%), Gaps = 20/451 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI---HDDVSATSS 61
R D +SVLL HS +K+ FV+ + AAL L ++ P L+ DD +
Sbjct: 21 RHDAAMLSVLLKHSGAKVFFVESHLLDVGRAALKLLAESSPASLPALLTTTDDDGEPGGA 80
Query: 62 PTVGH---PNFKWV------QPESEW--DPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G +++ + Q + W DP++LNYTSGTTS PKGVV+ HRG ++ TV++
Sbjct: 81 AASGRRTCTDYEDLIKNAPSQFDIRWPVDPISLNYTSGTTSRPKGVVYSHRGAYLNTVAT 140
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ + + P +LWT+PMFH NGW+ +WG+A GGTN+CLR+ I+ I VTH+
Sbjct: 141 VLTYDVGTAPTYLWTVPMFHGNGWNLTWGLAMQGGTNVCLRRFTAKDIFDGIARWKVTHM 200
Query: 171 CGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
GA VL+M+ ++P KP+ V+++T GA P VL+ E LGFV+ H YGLTET G
Sbjct: 201 GGAPTVLSMIVTAPPADRKPMPGTVRVITGGAPPLPHVLVEMERLGFVLYHVYGLTETCG 260
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CAW + + L ERARLKARQG + D DV P T SV DG++ GE++FR
Sbjct: 261 VATVCAWTPELDALPAEERARLKARQGCHHFAVQDADVKDPATMESVPRDGRTMGEVMFR 320
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M GY +D + + M W +TGD+ V H DG +++KDR+KD+IISGGEN+SS E
Sbjct: 321 GNTMMSGYYRDLDATKEAMA-GGWLHTGDLAVRHPDGSIQVKDRAKDIIISGGENVSSIE 379
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE++L +PA+ E A+VA+ D WG+ PCAFV LK S TE II FCR RLP YMA
Sbjct: 380 VETLLSSHPAVLEAAVVARPDDHWGETPCAFVKLKDGASA--TEAEIIGFCRERLPRYMA 437
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
++V+ ED LPKT TGK QKFVLRE A+
Sbjct: 438 PRTVVFED-LPKTPTGKTQKFVLREKARAMG 467
>gi|423094996|ref|ZP_17082792.1| AMP-binding domain protein [Pseudomonas fluorescens Q2-87]
gi|397887202|gb|EJL03685.1| AMP-binding domain protein [Pseudomonas fluorescens Q2-87]
Length = 540
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/449 (44%), Positives = 278/449 (61%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD--DVSATSSP 62
RLD + ++ +L H E+K+L D + + ALSL L KP L+ D D
Sbjct: 101 RLDAQAIAFMLEHGEAKVLIADREFHGVVQEALSL------LSKPPLVVDVDDPEFGEGR 154
Query: 63 TV-----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
+ G P F W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ + +
Sbjct: 155 AISPLDYEAFLEEGDPAFAWPWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD I ++I H V+H+C
Sbjct: 215 MTWAMGNHPVYLWTLPMFHCNGWCYPWTVTALAGTHVFLRRVDPQKILTLIGEHRVSHLC 274
Query: 172 GALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P S +D PV + +GA+PPA V+ E++G ++H YGLTE G
Sbjct: 275 GAPIVLNALVNLPDASRVTIDHPVSAMVAGAAPPAKVIEAVEAMGIKITHVYGLTEVYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW +QW+ + ERAR+K+RQGVR L + V P+T V DG GEI R
Sbjct: 335 VTVCAWHAQWDERSVDERARIKSRQGVRYPTLEGLMVADPQTLQPVACDGTRIGEIFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ + + + WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ EV
Sbjct: 395 NTVMKGYLKNPQATQEAFK-GGWFHTGDLAVRHPDGYVEIKDRLKDIIISGGENISTIEV 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E+VLY +PA+ E A+VA+ D+ WG+ PCAF++LK + E II FCR L +
Sbjct: 454 ENVLYRHPAVLEAAVVARPDEKWGETPCAFITLK-PGHQDILEADIILFCREHLAGFKLP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K+V+ ELPKT+TGKIQK+VLR+ A+
Sbjct: 513 KTVVF-SELPKTSTGKIQKYVLRDWAKAL 540
>gi|423201670|ref|ZP_17188249.1| hypothetical protein HMPREF1167_01832 [Aeromonas veronii AER39]
gi|404616702|gb|EKB13655.1| hypothetical protein HMPREF1167_01832 [Aeromonas veronii AER39]
Length = 540
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/443 (44%), Positives = 276/443 (62%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ + H++SK++ VD + + AL L + V+ DD V
Sbjct: 104 RLDAESMAFIFQHAQSKVVLVDREFGAVVRKALDLLECQPL----VIAIDDPLYREGALV 159
Query: 65 GHPNFK------------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ W+ P+ EW ++LNYTSGTT +PKGVV+ HRG + V++++
Sbjct: 160 SELTYEAFIATGNGDEPGWL-PQDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAVNNVL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P V+LWTLPMFH NGW + W +AA G ++CLR V IY + H V+H C
Sbjct: 219 SWELPKHSVYLWTLPMFHCNGWCFPWTLAATAGVSVCLRHVQASAIYEALHEHKVSHFCA 278
Query: 173 ALVVLNMLSSS-PSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML+++ P+ K LD P+K++T+GA+PPA V+ E++G V+H YGLTET G
Sbjct: 279 APIVLNMLNNADPALKQGLDHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPC 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V C + W T +RLKARQGV + +M V++P TG V DG++ GEIV R
Sbjct: 339 VLCEPQRSWQGQDATALSRLKARQGVASPLQGEMRVINPVTGEPVAKDGKTMGEIVLRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ S+ M + WF +GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 399 VVMKGYLKNPAASAEAMAEG-WFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P ++E A++A D+ WG+ PCAFV LK ++ T+ +I FCR ++ H+ A K
Sbjct: 458 DVLYRHPDVDEAAVIAMPDEKWGEVPCAFVKLK--EGRETTQAELIAFCREQMAHFKAPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+I LPKT+TGK+QKFVLR+
Sbjct: 516 RIIF-TPLPKTSTGKVQKFVLRK 537
>gi|260770299|ref|ZP_05879232.1| acyl-CoA synthase [Vibrio furnissii CIP 102972]
gi|260615637|gb|EEX40823.1| acyl-CoA synthase [Vibrio furnissii CIP 102972]
Length = 539
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 284/447 (63%), Gaps = 21/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDV-----SAT 59
RLD + ++ +L+H E+K+L D + + AL+L + P V+ DD AT
Sbjct: 101 RLDAETIAFMLNHCEAKVLICDREFHDVIAHALALMDT----PPLVIDVDDPEYGEGQAT 156
Query: 60 SSPTV------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
S G P ++W PE EW ++LNYTSGTT +PKGVV+ HRG ++ ++ + +
Sbjct: 157 SELDYETFLAEGDPAYEWQWPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ H V+H+CGA
Sbjct: 217 WSMGNHPVYLWTLPMFHCNGWCYPWTVTALAGVHVFLRRVDPQKILTLIREHQVSHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 PIVLNGLINMPEDAKAAIDHPVNAMVAGAAPPAKVIGDIEKMGIKVTHVYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW W++L ERA LK+RQGVR L + V +T V DG++ GEI R +
Sbjct: 337 VCAWHEAWDSLNLEERATLKSRQGVRYPTLEGVMVADIQTFQPVTKDGKTIGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + ++ D WF+TGD+GV H +GY+EIKDR KD+IISGGENIS+ E+E
Sbjct: 397 VMKGYLKNPDATAEAF-DGGWFHTGDLGVCHPNGYIEIKDRLKDIIISGGENISTIELED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PAI EV++VA+ D WG+ PCAF++LK ++ TE+ II++C L + K+
Sbjct: 456 VLYKHPAILEVSVVAKPDARWGESPCAFITLK--ETEYATEQEIIDYCHEHLAGFKVPKT 513
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
++ + LPKT+TGK+QK+VLR+ A+
Sbjct: 514 IVFAN-LPKTSTGKVQKYVLRDWAKAI 539
>gi|384260474|ref|YP_005415660.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
gi|378401574|emb|CCG06690.1| AMP-dependent synthetase and ligase [Rhodospirillum photometricum
DSM 122]
Length = 640
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/444 (44%), Positives = 269/444 (60%), Gaps = 26/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT----- 59
RL+ + ++ +L+H E+++L D + S AL L + +P+ + D V +
Sbjct: 199 RLNAEEIAFILNHGEARVLLTDTEFSATLREALPL------VERPLTVIDIVDSEYTGAG 252
Query: 60 ---------SSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
S G P + P+ EWD +ALNYTSGTT +PKGVV+ HRG + +S+
Sbjct: 253 ERLGQTDYESFLASGDPTYSGRWPDDEWDAIALNYTSGTTGNPKGVVYHHRGAALNALSN 312
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+I W +P V+LWTLPMFH NGW + W MAAV GTN+CLR+V I+ I VTH
Sbjct: 313 IITWGMPQGAVYLWTLPMFHCNGWCFPWTMAAVIGTNVCLRRVSAATIFKAIAEEKVTHF 372
Query: 171 CGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +VL L +S + D V ++T+ A PPA VL R + GF+V+H YGLTET G
Sbjct: 373 CGAPIVLGFLINASVQDRRTFDHTVNVMTAAAPPPAVVLERMQREGFLVTHVYGLTETYG 432
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C WK +WN L E+ARLKARQGVR + + V PET DG++ GE+ FR
Sbjct: 433 PSTVCFWKDEWNDLPIDEQARLKARQGVRYVAQDGLMVADPETLEPAPADGETMGEVFFR 492
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ E ++ R WF+TGD+GV+H DGY+++KDRSKD+IISGGENISS E
Sbjct: 493 GNITMKGYLKNPEATTESFR-GGWFHTGDLGVLHPDGYIQLKDRSKDIIISGGENISSIE 551
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VES L+ +P + A+VA+ D+ WG+ P A++ L+ TE +I FCR L HY
Sbjct: 552 VESALHRHPDVVSAAVVAKPDEKWGETPRAYIELR--DGATVTEAELIAFCREALAHYKC 609
Query: 409 HKSVIIEDELPKTATGKIQKFVLR 432
+ +I LPKT+TGKIQKF+LR
Sbjct: 610 PREIIF-GPLPKTSTGKIQKFILR 632
>gi|296387251|ref|ZP_06876750.1| acyl-CoA synthetase [Pseudomonas aeruginosa PAb1]
gi|416887472|ref|ZP_11922747.1| acyl-CoA synthetase [Pseudomonas aeruginosa 152504]
gi|334833179|gb|EGM12333.1| acyl-CoA synthetase [Pseudomonas aeruginosa 152504]
Length = 540
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/446 (43%), Positives = 273/446 (61%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + ++ +L H E+K+L DY+ + AA+ + ++ V ++D P
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDYEFHEVIHAAIGMLDHPPLV---VDVNDPEYGEGRPVG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P F W P EW ++LNYTSGTT +PKGVV+ HRG ++ + + + W
Sbjct: 158 ELDYEALLAEGDPQFAWEWPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ PV+LWTLPMFH NGW Y W + A+ G ++CLR+VD + ++I+ H V+H+CGA
Sbjct: 218 SMGQHPVYLWTLPMFHCNGWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 278 IVLNALINMPDSAKAAIDHPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +W+ L RA +K+RQGVR L + V P+T V DGQS GEI R ++
Sbjct: 338 CAWHGEWDELPLERRAAIKSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ E+E V
Sbjct: 398 MKGYLKNPSATGEAFA-GGWFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGV 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D+ WG+ PCAF++LK + + E I+ FCR L + ++V
Sbjct: 457 LYRHPAVLEAAVVARPDEKWGETPCAFITLKSD-HQGLAESEIVAFCREHLAAFKIPRTV 515
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ ELPKT+TGKIQK+VLRE A+
Sbjct: 516 VF-SELPKTSTGKIQKYVLREWAAAL 540
>gi|375132193|ref|YP_005048601.1| acyl-CoA synthetase [Vibrio furnissii NCTC 11218]
gi|315181368|gb|ADT88281.1| acyl-CoA synthetase [Vibrio furnissii NCTC 11218]
Length = 539
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 284/447 (63%), Gaps = 21/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDV-----SAT 59
RLD + ++ +L+H E+K+L D + + AL+L + P V+ DD AT
Sbjct: 101 RLDAETIAFMLNHCEAKVLICDREFHDVIAHALALMDT----PPLVIDVDDPEYGEGQAT 156
Query: 60 SSPTV------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
S G P ++W PE EW ++LNYTSGTT +PKGVV+ HRG ++ ++ + +
Sbjct: 157 SELDYEAFLAEGDPAYEWQWPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ H V+H+CGA
Sbjct: 217 WSMGNHPVYLWTLPMFHCNGWCYPWTVTALAGVHVFLRRVDPQKILTLIREHQVSHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 PIVLNGLINMPEDAKAAIDHPVNAMVAGAAPPAKVIGDIEKMGIKVTHVYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW W++L ERA LK+RQGVR L + V +T V DG++ GEI R +
Sbjct: 337 VCAWHEAWDSLNLEERATLKSRQGVRYPTLEGVMVADIQTFQPVTKDGKTIGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + ++ D WF+TGD+GV H +GY+EIKDR KD+IISGGENIS+ E+E
Sbjct: 397 VMKGYLKNPDATAEAF-DGGWFHTGDLGVCHPNGYIEIKDRLKDIIISGGENISTIELED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PAI EV++VA+ D WG+ PCAF++LK ++ TE+ II++C L + K+
Sbjct: 456 VLYKHPAILEVSVVAKPDARWGESPCAFITLK--ETEYATEQEIIDYCHEHLAGFKVPKT 513
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
++ + LPKT+TGK+QK+VLR+ A+
Sbjct: 514 IVFAN-LPKTSTGKVQKYVLRDWAKAI 539
>gi|357112583|ref|XP_003558088.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 574
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/454 (44%), Positives = 280/454 (61%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN----------------TILPK 48
RL+ + ++ LL HS ++++ VD + LA +L + T PK
Sbjct: 110 RLNAETIAFLLDHSMAEVVMVDQEFFTLAEESLKIVAERKKQEFRLPILLVVGDPTCNPK 169
Query: 49 PV---LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
+ L H G P F W P+ EW +AL YTSGTTSSPKGVV HRG ++
Sbjct: 170 SLQYALRHGATEYEEFLKTGDPEFNWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYL 229
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ +S + W +P ++LWTLPMFH NGW Y+W +AA+ GT+ICLR+V IY+ I
Sbjct: 230 MALSVAMVWGMPEGAIYLWTLPMFHCNGWCYTWALAALCGTSICLRQVSTKAIYTGIAKQ 289
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH C A VV+N L ++P+++ PL R V ++ +GA+P ++L GF V+H+YG
Sbjct: 290 GVTHFCAAPVVMNNLINAPASETFLPLPRVVNVMLAGAAPTPSLLAALSIRGFRVTHTYG 349
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L ER+ L RQG+R L +DVV P+T V DG+S
Sbjct: 350 LSETYGPSTVCAWKPEWDNLPLEERSLLHCRQGIRYTALEGLDVVDPKTMAPVPADGKSY 409
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + ++ + W+++GD+GV H DGY+E+KDR KD+IISGGE
Sbjct: 410 GEIVMRGNAVMKGYLKNPKANAEAF-AHGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGE 468
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA----IIEF 398
NIS+ E+E VLYM+P + E ++VA+ D+ WG+ PCAFV+LK E + E A I++F
Sbjct: 469 NISTLEIEKVLYMHPDVLEASVVARADERWGESPCAFVTLK-ESADSSDEAALAGNIMKF 527
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
CR R+P Y KSVI LPKTATGKI+K LR
Sbjct: 528 CRERMPGYWVPKSVIF-GPLPKTATGKIKKHELR 560
>gi|398845829|ref|ZP_10602843.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
gi|398253179|gb|EJN38322.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM84]
Length = 540
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 281/449 (62%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +LHH E+K+L D + + AAL+L L P L+ D
Sbjct: 101 RLDAEAIAFMLHHGEAKVLITDREFHTVIEAALAL------LEHPPLVVDVDDPEYGEGR 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G P F W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ + +
Sbjct: 155 AVSDLDYEALLAEGDPEFAWEWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAIGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + ++PV+LWTLPMFH NGW Y W + A+ GT++ LR+VD I ++I+ H V+H+C
Sbjct: 215 MTWGMGHRPVYLWTLPMFHCNGWCYPWTITALAGTHVFLRRVDPQKILTLIREHRVSHLC 274
Query: 172 GALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P + ++ PV+ + +GA+PPA V+ E +G V+H+YGLTE G
Sbjct: 275 GAPIVLNALVNMPEAAKAAIEHPVQAMVAGAAPPAKVIGAVEEMGIHVTHTYGLTEVYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW +W L +RAR+K+RQGVR L + V P+T V DG + GEI R
Sbjct: 335 VTVCAWHDEWQDLPLEDRARIKSRQGVRYPTLDGLMVADPQTLEPVPRDGNTLGEIFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ E ++ R WF+TGD+ V H+DGY+EIKDR KD+IISGGENIS+ EV
Sbjct: 395 NTVMKGYLKNPEATAEAFR-GGWFHTGDLAVWHADGYVEIKDRLKDIIISGGENISTIEV 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L+ + A+ E A+VA+ D+ WG+ PCAFV+LK + E II +CR + +
Sbjct: 454 EDTLFKHHAVLEAAVVARADEKWGETPCAFVALK-PGHEHTRESDIIGWCREHMAGFKVP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K+V+ ELPKT+TGKIQK+VLR+ A+
Sbjct: 513 KTVVF-GELPKTSTGKIQKYVLRDRAKAL 540
>gi|254237073|ref|ZP_04930396.1| hypothetical protein PACG_03110 [Pseudomonas aeruginosa C3719]
gi|392982144|ref|YP_006480731.1| acyl-CoA synthetase [Pseudomonas aeruginosa DK2]
gi|419756705|ref|ZP_14283050.1| acyl-CoA synthetase [Pseudomonas aeruginosa PADK2_CF510]
gi|424938926|ref|ZP_18354689.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
gi|126169004|gb|EAZ54515.1| hypothetical protein PACG_03110 [Pseudomonas aeruginosa C3719]
gi|346055372|dbj|GAA15255.1| probable AMP-binding enzyme [Pseudomonas aeruginosa NCMG1179]
gi|384396460|gb|EIE42878.1| acyl-CoA synthetase [Pseudomonas aeruginosa PADK2_CF510]
gi|392317649|gb|AFM63029.1| acyl-CoA synthetase [Pseudomonas aeruginosa DK2]
Length = 540
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/446 (43%), Positives = 273/446 (61%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + ++ +L H E+K+L DY+ + AA+ + ++ V ++D P
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDYEFHEVIHAAIGMLDHPPLV---VDVNDPEYGEGRPVG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P F W P EW ++LNYTSGTT +PKGVV+ HRG ++ + + + W
Sbjct: 158 ELDYEALLAEGDPQFAWEWPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ PV+LWTLPMFH NGW Y W + A+ G ++CLR+VD + ++I+ H V+H+CGA
Sbjct: 218 SMGQHPVYLWTLPMFHCNGWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 278 IVLNALINMPDSAKAAIDHPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +W+ L RA +K+RQGVR L + V P+T V DGQS GEI R ++
Sbjct: 338 CAWHGEWDDLPLERRAAIKSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ E+E V
Sbjct: 398 MKGYLKNPSATEEAFA-GGWFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGV 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D+ WG+ PCAF++LK + + E I+ FCR L + ++V
Sbjct: 457 LYRHPAVLEAAVVARPDEKWGETPCAFITLKSD-HQGLAESEIVAFCREHLAAFKIPRTV 515
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ ELPKT+TGKIQK+VLRE A+
Sbjct: 516 VF-SELPKTSTGKIQKYVLREWAAAL 540
>gi|15599393|ref|NP_252887.1| acyl-CoA synthetase [Pseudomonas aeruginosa PAO1]
gi|107103715|ref|ZP_01367633.1| hypothetical protein PaerPA_01004786 [Pseudomonas aeruginosa PACS2]
gi|218889473|ref|YP_002438337.1| acyl-CoA synthetase [Pseudomonas aeruginosa LESB58]
gi|254242879|ref|ZP_04936201.1| hypothetical protein PA2G_03649 [Pseudomonas aeruginosa 2192]
gi|313109646|ref|ZP_07795590.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|355639085|ref|ZP_09050927.1| hypothetical protein HMPREF1030_00013 [Pseudomonas sp. 2_1_26]
gi|386056808|ref|YP_005973330.1| acyl-CoA synthetase [Pseudomonas aeruginosa M18]
gi|386068299|ref|YP_005983603.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|416861852|ref|ZP_11914763.1| acyl-CoA synthetase [Pseudomonas aeruginosa 138244]
gi|418593752|ref|ZP_13157583.1| acyl-CoA synthetase [Pseudomonas aeruginosa MPAO1/P2]
gi|420137378|ref|ZP_14645361.1| acyl-CoA synthetase [Pseudomonas aeruginosa CIG1]
gi|421165678|ref|ZP_15623993.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 700888]
gi|421180920|ref|ZP_15638453.1| acyl-CoA synthetase [Pseudomonas aeruginosa E2]
gi|421518748|ref|ZP_15965422.1| acyl-CoA synthetase [Pseudomonas aeruginosa PAO579]
gi|9950409|gb|AAG07585.1|AE004836_4 probable AMP-binding enzyme [Pseudomonas aeruginosa PAO1]
gi|126196257|gb|EAZ60320.1| hypothetical protein PA2G_03649 [Pseudomonas aeruginosa 2192]
gi|218769696|emb|CAW25456.1| probable AMP-binding enzyme [Pseudomonas aeruginosa LESB58]
gi|310882092|gb|EFQ40686.1| putative AMP-binding enzyme [Pseudomonas aeruginosa 39016]
gi|334836529|gb|EGM15336.1| acyl-CoA synthetase [Pseudomonas aeruginosa 138244]
gi|347303114|gb|AEO73228.1| acyl-CoA synthetase [Pseudomonas aeruginosa M18]
gi|348036858|dbj|BAK92218.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|354832161|gb|EHF16161.1| hypothetical protein HMPREF1030_00013 [Pseudomonas sp. 2_1_26]
gi|375046339|gb|EHS38902.1| acyl-CoA synthetase [Pseudomonas aeruginosa MPAO1/P2]
gi|403249867|gb|EJY63340.1| acyl-CoA synthetase [Pseudomonas aeruginosa CIG1]
gi|404348230|gb|EJZ74579.1| acyl-CoA synthetase [Pseudomonas aeruginosa PAO579]
gi|404540831|gb|EKA50217.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 700888]
gi|404544622|gb|EKA53765.1| acyl-CoA synthetase [Pseudomonas aeruginosa E2]
gi|453043038|gb|EME90773.1| acyl-CoA synthetase [Pseudomonas aeruginosa PA21_ST175]
Length = 540
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/446 (43%), Positives = 273/446 (61%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + ++ +L H E+K+L DY+ + AA+ + ++ V ++D P
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDYEFHEVIHAAIGMLDHPPLV---VDVNDPEYGEGRPVG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P F W P EW ++LNYTSGTT +PKGVV+ HRG ++ + + + W
Sbjct: 158 ELDYEALLAEGDPQFAWEWPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ PV+LWTLPMFH NGW Y W + A+ G ++CLR+VD + ++I+ H V+H+CGA
Sbjct: 218 SMGQHPVYLWTLPMFHCNGWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 278 IVLNALINMPDSAKAAIDHPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +W+ L RA +K+RQGVR L + V P+T V DGQS GEI R ++
Sbjct: 338 CAWHGEWDDLPLERRAAIKSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ E+E V
Sbjct: 398 MKGYLKNPSATEEAFA-GGWFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGV 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D+ WG+ PCAF++LK + + E I+ FCR L + ++V
Sbjct: 457 LYRHPAVLEAAVVARPDEKWGETPCAFITLKSD-HQGLAESEIVAFCREHLAAFKIPRTV 515
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ ELPKT+TGKIQK+VLRE A+
Sbjct: 516 VF-SELPKTSTGKIQKYVLREWAAAL 540
>gi|116052235|ref|YP_788921.1| acyl-CoA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421172533|ref|ZP_15630299.1| acyl-CoA synthetase [Pseudomonas aeruginosa CI27]
gi|115587456|gb|ABJ13471.1| putative AMP-binding enzyme [Pseudomonas aeruginosa UCBPP-PA14]
gi|404537467|gb|EKA47063.1| acyl-CoA synthetase [Pseudomonas aeruginosa CI27]
Length = 540
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/446 (43%), Positives = 273/446 (61%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + ++ +L H E+K+L DY+ + AA+ + ++ V ++D P
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDYEFHEVIHAAIGMLDHPPLV---VDVNDPEYGEGRPVG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P F W P EW ++LNYTSGTT +PKGVV+ HRG ++ + + + W
Sbjct: 158 ELDYEALLAEGDPQFAWEWPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ PV+LWTLPMFH NGW Y W + A+ G ++CLR+VD + ++I+ H V+H+CGA
Sbjct: 218 SMGQHPVYLWTLPMFHCNGWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 278 IVLNALINMPDSAKAAIDHPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +W+ L RA +K+RQGVR L + V P+T V DGQS GEI R ++
Sbjct: 338 CAWHGEWDELPLERRAAIKSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ E+E V
Sbjct: 398 MKGYLKNPSATEEAFA-GGWFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGV 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D+ WG+ PCAF++LK + + E I+ FCR L + ++V
Sbjct: 457 LYRHPAVLEAAVVARPDEKWGETPCAFITLKSD-HQGLAESEIVAFCREHLAAFKIPRTV 515
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ ELPKT+TGKIQK+VLRE A+
Sbjct: 516 VF-SELPKTSTGKIQKYVLREWAAAL 540
>gi|418588083|ref|ZP_13152099.1| acyl-CoA synthetase [Pseudomonas aeruginosa MPAO1/P1]
gi|375041136|gb|EHS33852.1| acyl-CoA synthetase [Pseudomonas aeruginosa MPAO1/P1]
Length = 540
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/446 (43%), Positives = 273/446 (61%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + ++ +L H E+K+L DY+ + AA+ + ++ V ++D P
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDYEFHEVIHAAIGMLDHPPLV---VDVNDPEYGEGRPVG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P F W P EW ++LNYTSGTT +PKGVV+ HRG ++ + + + W
Sbjct: 158 ELDYEALLAEGDPQFAWEWPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ PV+LWTLPMFH NGW Y W + A+ G ++CLR+VD + ++I+ H V+H+CGA
Sbjct: 218 SMGQHPVYLWTLPMFHCNGWXYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 278 IVLNALINMPDSAKAAIDHPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +W+ L RA +K+RQGVR L + V P+T V DGQS GEI R ++
Sbjct: 338 CAWHGEWDDLPLERRAAIKSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ E+E V
Sbjct: 398 MKGYLKNPSATEEAFA-GGWFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGV 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D+ WG+ PCAF++LK + + E I+ FCR L + ++V
Sbjct: 457 LYRHPAVLEAAVVARPDEKWGETPCAFITLKSD-HQGLAESEIVAFCREHLAAFKIPRTV 515
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ ELPKT+TGKIQK+VLRE A+
Sbjct: 516 VF-SELPKTSTGKIQKYVLREWAAAL 540
>gi|326521182|dbj|BAJ96794.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 579
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/454 (44%), Positives = 281/454 (61%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF----PSNTILPKPVLIHDDVSATS 60
RL+ + ++ LL HS ++++ VD + LA +L + N P ++I D
Sbjct: 115 RLNAETIAFLLDHSVAEVVMVDQEFFTLAEESLKIVSEKKKQNFRPPVLIVIADPTCEPK 174
Query: 61 SPT---------------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
S G P F W P+ EW +AL YTSGTTSSPKGVV HRG ++
Sbjct: 175 SLQYALGQGAIEYEDFLKTGDPEFNWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYL 234
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ +S + W +P V+LWTLPMFH NGW Y+W +AA GT+ICLR+V IY+ I
Sbjct: 235 MALSVAMVWGMPEGAVYLWTLPMFHCNGWCYTWALAAFCGTSICLRQVSTKAIYTGIAKQ 294
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH C A VV+N L ++P+++ PL R V ++ +GA+P ++L GF V+H+YG
Sbjct: 295 GVTHFCAAPVVMNNLINAPASETFLPLPRVVNVMVAGAAPTPSLLAALSVRGFRVTHTYG 354
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G C WKS+W+ L ER+RL RQG+R L +DVV P+T + V +G+S
Sbjct: 355 LSETYGPSTVCVWKSEWDNLPLEERSRLHCRQGIRYTALEGLDVVDPKTMVPVPANGKSY 414
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + ++ + W+++GD+GV H DGY+E+KDR KD+IISGGE
Sbjct: 415 GEIVMRGNAVMKGYLKNPKANAEAFA-HGWYHSGDLGVKHPDGYIEVKDRMKDIIISGGE 473
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA----IIEF 398
NIS+ EVE V+YM+PA+ E ++VA+ D WG+ PCAFV+LK E + E A I+ F
Sbjct: 474 NISTLEVEKVVYMHPAVLEASVVARADDRWGESPCAFVTLK-EGAGGSDEVALANDIMRF 532
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
CR R+P Y KSV+ LPKTATGKI+K LR
Sbjct: 533 CRERMPGYWVPKSVVF-GPLPKTATGKIKKHELR 565
>gi|357120833|ref|XP_003562129.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
ligase-like [Brachypodium distachyon]
Length = 556
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/446 (46%), Positives = 274/446 (61%), Gaps = 23/446 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN---TILPKPVLIHDDVSATSS 61
R D VS LL HS SK+ FV+ +A AL T LP V I D+ +A S
Sbjct: 101 RHDAAMVSALLKHSGSKVFFVESSLLDVAKGALRRITDQLGTTSLPVLVTISDETNAGDS 160
Query: 62 PTVGHP------------NFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
+ + +W P +E DP+ LNYTSGTTS PKGV++ HRG ++ T++
Sbjct: 161 SRRDYEYEDLIKYAPSGFDIRW--PVNEPDPITLNYTSGTTSRPKGVIYNHRGAYLNTIA 218
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+++ + I +LWT+PMFH NGW+ WG+A GGTNICL +I++ I H V+H
Sbjct: 219 TVLAYDITTMLTYLWTVPMFHGNGWNLPWGVAMQGGTNICLHHFTAKVIFNNIARHRVSH 278
Query: 170 ICGALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
+ GA VLNM+ S+P+ KPL ++++T GA PP V E LGFVV H YGLTET
Sbjct: 279 MGGAPTVLNMIISAPTGDRKPLPXGLRVMTGGAPPPPRVFNEMEDLGFVVYHVYGLTETC 338
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G W +W+ L ERA LKARQG + I + D+DV + +T S +DGQ+ GE++F
Sbjct: 339 GAATVRTWMPEWDALPAHERALLKARQGFQHIAIQDIDVKNSKTMESQPYDGQTVGEVMF 398
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R +IM GY KD + + M W +TGD+ V DG ++IKDR+KD+IISGGENISS
Sbjct: 399 RGNTIMSGYYKDIDATKESMA-GGWLHTGDLAVRQPDGCIQIKDRAKDIIISGGENISST 457
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
VESV+ +PA+ E ++VA+ D WG+ PCAFV LK S TE II FCR RLPHYM
Sbjct: 458 VVESVISNHPAVLEASVVARPDDHWGETPCAFVKLKNGTSV--TEAEIIGFCRDRLPHYM 515
Query: 408 AHKSVIIEDELPKTATGKIQKFVLRE 433
A K+V+ ED LPKT+TGK QKFVL E
Sbjct: 516 APKTVVFED-LPKTSTGKTQKFVLGE 540
>gi|421151816|ref|ZP_15611416.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 14886]
gi|451987165|ref|ZP_21935324.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas aeruginosa 18A]
gi|404526541|gb|EKA36749.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 14886]
gi|451755161|emb|CCQ87847.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas aeruginosa 18A]
Length = 540
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 192/446 (43%), Positives = 272/446 (60%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + ++ +L H E+K+L DY+ + AA+ + ++ V ++D P
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDYEFHEVIHAAIGMLDHPPLV---VDVNDPEYGEGRPVG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P F W P EW ++LNYTSGTT +PKGVV+ HRG ++ + + + W
Sbjct: 158 ELDYEALLAEGDPQFAWEWPRDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ PV+LWTLPMFH NGW Y W + A+ G ++CLR+VD + ++I+ H V+H+CGA
Sbjct: 218 SMGQHPVYLWTLPMFHCNGWCYPWTVTALAGVHVCLRRVDPQKVLTLIREHQVSHLCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 278 IVLNALINMPDSAKAAIDHPVHAMVAGAAPPAKVIGAVEEMGIRVTHVYGLTEVYGPVTV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +W+ L RA +K+RQGVR L + V P+T V DGQS GEI R ++
Sbjct: 338 CAWHGEWDDLPLERRAAIKSRQGVRYPTLEGVMVADPKTLEPVPRDGQSIGEIFMRGNTV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ E+E V
Sbjct: 398 MKGYLKNPSATEEAFA-GGWFHTGDLAVCHPDGYIEIRDRLKDIIISGGENISTIELEGV 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D+ WG+ PCAF++LK + E I+ FCR L + ++V
Sbjct: 457 LYRHPAVLEAAVVARPDEKWGETPCAFITLK-SNHQGLAESEIVAFCREHLAAFKIPRTV 515
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ ELPKT+TGKIQK+VLRE A+
Sbjct: 516 VF-SELPKTSTGKIQKYVLREWAAAL 540
>gi|381166879|ref|ZP_09876092.1| putative AMP-binding enzyme [Phaeospirillum molischianum DSM 120]
gi|380683931|emb|CCG40904.1| putative AMP-binding enzyme [Phaeospirillum molischianum DSM 120]
Length = 545
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 201/444 (45%), Positives = 283/444 (63%), Gaps = 22/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H +K+L D + SP+ ALSL + P++I + T+S T+
Sbjct: 104 RLDAEAIAFMLEHGGAKVLLTDREFSPVITKALSLLKA-----PPLVIDINDPDTASGTL 158
Query: 65 ------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P + W P EW+ +ALNYTSGTT +PKGVV+ HRG +I + + +
Sbjct: 159 IGVCDYETFLSSGDPAYVWRWPTDEWEAIALNYTSGTTGNPKGVVYHHRGAYINALGNAV 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV+LWTLPMFH NGW + W + A+ GT++CLR+++ I++ I+ H VTH+CG
Sbjct: 219 TWGMSGHPVYLWTLPMFHCNGWCFPWTITALAGTHVCLRRIEGRAIFAAIETHKVTHMCG 278
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V+ ML+++P +PL V +T+ A PPAAV+ R E GF ++H YGLTE G V
Sbjct: 279 APIVMGMLTNTPEKERRPLPHEVAFMTAAAPPPAAVIERLEGQGFRITHVYGLTEVYGPV 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAW +WN L ERAR KARQGVR + + + P + V DG + GE+ FR
Sbjct: 339 TVCAWHDEWNDLPQEERARKKARQGVRYVNQEAVMIADPLSLEPVPQDGNTMGEVFFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GY K+ ++ WF+TGD+GV H DGY+E+KDRSKD+IISGGENIS+ EVE
Sbjct: 399 VVMKGYFKNPVATAEAF-SGGWFHTGDLGVWHPDGYIELKDRSKDIIISGGENISTIEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SVLY +PA+ E A+VA+ D+ WG+ PCAF+ LK E + TE+ II F R +L HY +
Sbjct: 458 SVLYQHPAVAEAAVVARPDERWGETPCAFIGLK-EGAAPVTEDEIIAFTRTKLAHYKCPR 516
Query: 411 SVIIEDELPKTATGKIQKFVLREI 434
++I LPKT+TGK+QK+VLRE+
Sbjct: 517 TIIF-TALPKTSTGKVQKYVLREM 539
>gi|222111655|ref|YP_002553919.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
gi|221731099|gb|ACM33919.1| AMP-dependent synthetase and ligase [Acidovorax ebreus TPSY]
Length = 548
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 272/445 (61%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K + VD + +P+ AL+L S P+L+ D A P
Sbjct: 102 RLDPETIAFMLDHGEAKAVIVDPEFAPVMAKALALRQSQA----PLLLIDVEDAVYGPAA 157
Query: 65 --------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G F W P EWD +ALNYTSGTT +PKGVV+ HRG VS+
Sbjct: 158 QRLGTLTYEDFLAQGDAQFAWELPGDEWDAIALNYTSGTTGNPKGVVYHHRGAHTNAVSN 217
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW + W +AA G N+CLR+V+ I+ I++HGVTH
Sbjct: 218 VLEWDMPKHAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRRVEAQAIFDAIRNHGVTHY 277
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V +L ++P+ P VK + +GA+PPA+++ E +GF ++H YGLTE G
Sbjct: 278 CGAPIVHGLLVNAPAAMKEGVPAGVKAMVAGAAPPASMIEGMEQMGFDLTHVYGLTEVYG 337
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA + W+ L ERARL ARQGVR V++P+T V HDG++ GEI+FR
Sbjct: 338 PATVCAKHAAWDALDIGERARLNARQGVRYHLQRAAMVLNPDTMEPVPHDGETMGEIMFR 397
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ + + R WF++GD+ V + DGY++IKDRSKD+IISGGENISS E
Sbjct: 398 GNIAMKGYLKNPKATEEAFR-GGWFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIE 456
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +P + A+VA+ D WG+ PCAFV LK + T E I+ C+ L +
Sbjct: 457 VEDVLYRHPDVLAAAVVAKPDPKWGETPCAFVELK--AGAQATPEDIVAHCKKHLAGFKV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++V+ ELPKT+TGKIQKF LR+
Sbjct: 515 PRAVVF-GELPKTSTGKIQKFELRK 538
>gi|334704897|ref|ZP_08520763.1| AMP-binding protein [Aeromonas caviae Ae398]
Length = 540
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/443 (44%), Positives = 275/443 (62%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ + H++SK++ VD + + ALSL S + V+ DD V
Sbjct: 104 RLDADAMAFIFQHAQSKVVLVDREFGAVVRKALSLIDSQPL----VIAIDDPLYREGELV 159
Query: 65 GHPNFK------------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G +++ W+ P EW ++LNYTSGTT +PKGVV+ HRG + +++ +
Sbjct: 160 GELDYEGFIALGDGDEPGWL-PADEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNAL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P PV+LWTLPMFH NGW + W +AA G ++CLR V IY ++ H V+H C
Sbjct: 219 SWELPKHPVYLWTLPMFHCNGWCFPWTLAATAGVSVCLRHVQAAAIYGALREHKVSHFCA 278
Query: 173 ALVVLNMLSSS-PSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML+++ P+ K LD PVK +T+GA+PPA V+ E++G V+H YGLTET G
Sbjct: 279 APIVLNMLNNADPALKQGLDHPVKAMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPC 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V C + +W +RLKARQGV + +M V++P +G V DG++ GEIV R
Sbjct: 339 VVCEPQRRWQGQDAATLSRLKARQGVASPLQGEMRVINPVSGEPVPMDGKTLGEIVLRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ S M WF +GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 399 IVMKGYLKNPAASEEEMAQG-WFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P + E A++A D+ WG+ PCAFV LK ++ T+ +I FCR ++ H+ A K
Sbjct: 458 DVLYRHPDVEEAAVIAMPDETWGEVPCAFVKLK--EGRELTQAELIAFCREQMAHFKAPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+I LPKT+TGK+QKF+LR+
Sbjct: 516 RIIF-TPLPKTSTGKVQKFMLRK 537
>gi|121595441|ref|YP_987337.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
gi|120607521|gb|ABM43261.1| AMP-dependent synthetase and ligase [Acidovorax sp. JS42]
Length = 545
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 272/445 (61%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K + VD + +P+ AL+L S P+L+ D A P
Sbjct: 99 RLDPETIAFMLDHGEAKAVIVDPEFAPVMAKALALRQSQA----PLLLIDVEDAVYGPAA 154
Query: 65 --------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G F W P EWD +ALNYTSGTT +PKGVV+ HRG VS+
Sbjct: 155 QRLGTLTYEDFLAQGDAQFAWELPGDEWDAIALNYTSGTTGNPKGVVYHHRGAHTNAVSN 214
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW + W +AA G N+CLR+V+ I+ I++HGVTH
Sbjct: 215 VLEWDMPKHAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRRVEAQAIFDAIRNHGVTHY 274
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V +L ++P+ P VK + +GA+PPA+++ E +GF ++H YGLTE G
Sbjct: 275 CGAPIVHGLLVNAPAAMKEGVPAGVKAMVAGAAPPASMIEGMEQMGFDLTHVYGLTEVYG 334
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA + W+ L ERARL ARQGVR V++P+T V HDG++ GEI+FR
Sbjct: 335 PATVCAKHAAWDALDIGERARLNARQGVRYHLQRAAMVLNPDTMEPVPHDGETMGEIMFR 394
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ + + R WF++GD+ V + DGY++IKDRSKD+IISGGENISS E
Sbjct: 395 GNIAMKGYLKNPKATEEAFR-GGWFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIE 453
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +P + A+VA+ D WG+ PCAFV LK + T E I+ C+ L +
Sbjct: 454 VEDVLYRHPDVLAAAVVAKPDPKWGETPCAFVELK--AGAQATPEDIVAHCKKHLAGFKV 511
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++V+ ELPKT+TGKIQKF LR+
Sbjct: 512 PRAVVF-GELPKTSTGKIQKFELRK 535
>gi|184156914|ref|YP_001845253.1| acyl-CoA synthetase [Acinetobacter baumannii ACICU]
gi|332874009|ref|ZP_08441944.1| CoA ligase [Acinetobacter baumannii 6014059]
gi|384130590|ref|YP_005513202.1| Putative AMP-dependent synthetase/ligase [Acinetobacter baumannii
1656-2]
gi|384141874|ref|YP_005524584.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-ZJ06]
gi|385236182|ref|YP_005797521.1| acyl-CoA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|387125172|ref|YP_006291054.1| acyl-CoA synthetase [Acinetobacter baumannii MDR-TJ]
gi|407931518|ref|YP_006847161.1| acyl-CoA synthetase [Acinetobacter baumannii TYTH-1]
gi|416146691|ref|ZP_11601354.1| acyl-CoA synthetase [Acinetobacter baumannii AB210]
gi|417548789|ref|ZP_12199870.1| AMP-binding enzyme [Acinetobacter baumannii Naval-18]
gi|417564663|ref|ZP_12215537.1| AMP-binding enzyme [Acinetobacter baumannii OIFC143]
gi|417570653|ref|ZP_12221510.1| AMP-binding enzyme [Acinetobacter baumannii OIFC189]
gi|417577381|ref|ZP_12228226.1| long-chain-fatty-acid--CoA ligase [Acinetobacter baumannii
Naval-17]
gi|417871225|ref|ZP_12516168.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH1]
gi|417875895|ref|ZP_12520695.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH2]
gi|417879611|ref|ZP_12524168.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH3]
gi|417882301|ref|ZP_12526603.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH4]
gi|421201774|ref|ZP_15658929.1| acyl-CoA synthetase [Acinetobacter baumannii AC12]
gi|421535300|ref|ZP_15981562.1| acyl-CoA synthetase [Acinetobacter baumannii AC30]
gi|421630546|ref|ZP_16071249.1| AMP-binding enzyme [Acinetobacter baumannii OIFC180]
gi|421656339|ref|ZP_16096647.1| AMP-binding enzyme [Acinetobacter baumannii Naval-72]
gi|421662306|ref|ZP_16102474.1| AMP-binding enzyme [Acinetobacter baumannii OIFC110]
gi|421688401|ref|ZP_16128101.1| AMP-binding enzyme [Acinetobacter baumannii IS-143]
gi|421693906|ref|ZP_16133538.1| AMP-binding enzyme [Acinetobacter baumannii WC-692]
gi|421702319|ref|ZP_16141803.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1122]
gi|421706058|ref|ZP_16145478.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1219]
gi|421791490|ref|ZP_16227666.1| AMP-binding enzyme [Acinetobacter baumannii Naval-2]
gi|424053657|ref|ZP_17791188.1| hypothetical protein W9G_02849 [Acinetobacter baumannii Ab11111]
gi|424064594|ref|ZP_17802078.1| hypothetical protein W9M_02583 [Acinetobacter baumannii Ab44444]
gi|425753778|ref|ZP_18871646.1| AMP-binding enzyme [Acinetobacter baumannii Naval-113]
gi|445465138|ref|ZP_21449916.1| AMP-binding enzyme [Acinetobacter baumannii OIFC338]
gi|445481403|ref|ZP_21455847.1| AMP-binding enzyme / PF13193 domain multi-domain protein
[Acinetobacter baumannii Naval-78]
gi|183208508|gb|ACC55906.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii ACICU]
gi|322506810|gb|ADX02264.1| Putative AMP-dependent synthetase/ligase [Acinetobacter baumannii
1656-2]
gi|323516679|gb|ADX91060.1| acyl-CoA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|332737750|gb|EGJ68642.1| CoA ligase [Acinetobacter baumannii 6014059]
gi|333366072|gb|EGK48086.1| acyl-CoA synthetase [Acinetobacter baumannii AB210]
gi|342224511|gb|EGT89541.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH2]
gi|342226046|gb|EGT91022.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH1]
gi|342227709|gb|EGT92622.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH3]
gi|342238042|gb|EGU02484.1| acyl-CoA synthetase [Acinetobacter baumannii ABNIH4]
gi|347592367|gb|AEP05088.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-ZJ06]
gi|385879664|gb|AFI96759.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acinetobacter
baumannii MDR-TJ]
gi|395551101|gb|EJG17110.1| AMP-binding enzyme [Acinetobacter baumannii OIFC189]
gi|395556419|gb|EJG22420.1| AMP-binding enzyme [Acinetobacter baumannii OIFC143]
gi|395570602|gb|EJG31264.1| long-chain-fatty-acid--CoA ligase [Acinetobacter baumannii
Naval-17]
gi|398328659|gb|EJN44782.1| acyl-CoA synthetase [Acinetobacter baumannii AC12]
gi|400389088|gb|EJP52160.1| AMP-binding enzyme [Acinetobacter baumannii Naval-18]
gi|404561144|gb|EKA66380.1| AMP-binding enzyme [Acinetobacter baumannii IS-143]
gi|404569745|gb|EKA74830.1| AMP-binding enzyme [Acinetobacter baumannii WC-692]
gi|404667143|gb|EKB35064.1| hypothetical protein W9G_02849 [Acinetobacter baumannii Ab11111]
gi|404672677|gb|EKB40481.1| hypothetical protein W9M_02583 [Acinetobacter baumannii Ab44444]
gi|407194491|gb|EKE65631.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1122]
gi|407194693|gb|EKE65830.1| acyl-CoA synthetase [Acinetobacter baumannii ZWS1219]
gi|407900099|gb|AFU36930.1| acyl-CoA synthetase [Acinetobacter baumannii TYTH-1]
gi|408505728|gb|EKK07447.1| AMP-binding enzyme [Acinetobacter baumannii Naval-72]
gi|408697399|gb|EKL42913.1| AMP-binding enzyme [Acinetobacter baumannii OIFC180]
gi|408715109|gb|EKL60239.1| AMP-binding enzyme [Acinetobacter baumannii OIFC110]
gi|409986853|gb|EKO43044.1| acyl-CoA synthetase [Acinetobacter baumannii AC30]
gi|410402995|gb|EKP55098.1| AMP-binding enzyme [Acinetobacter baumannii Naval-2]
gi|425497672|gb|EKU63777.1| AMP-binding enzyme [Acinetobacter baumannii Naval-113]
gi|444770195|gb|ELW94352.1| AMP-binding enzyme / PF13193 domain multi-domain protein
[Acinetobacter baumannii Naval-78]
gi|444779270|gb|ELX03264.1| AMP-binding enzyme [Acinetobacter baumannii OIFC338]
Length = 542
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|402701949|ref|ZP_10849928.1| acyl-CoA synthetase [Pseudomonas fragi A22]
Length = 540
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/446 (42%), Positives = 280/446 (62%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + ++ +L H E+++L D + + AA+++ ++ + + D P
Sbjct: 101 RLDAEAIAFMLAHGEARVLIADREFHAVIHAAVAMLDHPPLI---IDVDDPQYGEGQPVS 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
T G P++ W P EW +ALNYTSGTT +PKGVV+ HRG ++ ++ + + W
Sbjct: 158 TLDYEALLTEGDPDYPWQWPADEWQAIALNYTSGTTGNPKGVVYHHRGAYLNSLGNQMVW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
I N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I S+I+ H VTH+CGA
Sbjct: 218 AIGNHPVYLWTLPMFHCNGWCYPWIITALAGVHVFLRRVDPQRILSLIQEHQVTHMCGAP 277
Query: 175 VVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLN L++ P + +D PV ++ +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 278 IVLNALTNLPLSARVAIDHPVSVMVAGAAPPAQVIGAVEEMGIKVTHVYGLTEVYGPVTI 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW QW+ ERA++K+RQGVR L + V P+T + DG++ GEI R ++
Sbjct: 338 CAWHEQWDARPLAERAQIKSRQGVRYPTLEGVMVADPKTLVPTPRDGETMGEIFMRGNTV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ ++ + WF+TGD+ V H DGY+EI+DR KD+IISGGENIS+ EVE V
Sbjct: 398 MKGYLKNPSATAQAF-EGGWFHTGDLAVCHPDGYMEIRDRLKDIIISGGENISTIEVEGV 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P + E A+VA+ D+ WG+ PCAF++LK + ++ E II FCR L + ++V
Sbjct: 457 LYRHPGVLEAAVVARPDEKWGETPCAFITLK-DDHQQVLELDIIAFCRQHLAGFKVPRTV 515
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ LPKT+TGK+QK++LR++ A+
Sbjct: 516 VFT-LLPKTSTGKVQKYLLRDMAKAL 540
>gi|445486266|ref|ZP_21457324.1| AMP-binding enzyme [Acinetobacter baumannii AA-014]
gi|444769751|gb|ELW93919.1| AMP-binding enzyme [Acinetobacter baumannii AA-014]
Length = 542
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLYSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|421789508|ref|ZP_16225766.1| AMP-binding enzyme [Acinetobacter baumannii Naval-82]
gi|410398639|gb|EKP50850.1| AMP-binding enzyme [Acinetobacter baumannii Naval-82]
Length = 542
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|239500702|ref|ZP_04660012.1| acyl-CoA synthetase [Acinetobacter baumannii AB900]
gi|421677635|ref|ZP_16117527.1| AMP-binding enzyme [Acinetobacter baumannii OIFC111]
gi|410393391|gb|EKP45745.1| AMP-binding enzyme [Acinetobacter baumannii OIFC111]
Length = 542
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDTKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|374333073|ref|YP_005083257.1| acyl-CoA synthetase [Pseudovibrio sp. FO-BEG1]
gi|359345861|gb|AEV39235.1| acyl-CoA synthetase [Pseudovibrio sp. FO-BEG1]
Length = 548
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/442 (44%), Positives = 274/442 (61%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ L H+ESKL+ VD + S + AL L T+ P VL D S+P +
Sbjct: 108 RLDAAIIAFQLDHAESKLVIVDREFSKVMSEALEL---ATVKPTVVLYDDKEFPQSAPVI 164
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +F+W P+ EWD + LNYTSGTT +PKGVV+ HRG +++ +++I
Sbjct: 165 GELEYEELIASGSTDFQWQLPKDEWDAITLNYTSGTTGNPKGVVYHHRGAYLLAQANIIT 224
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ +PV+LWTLPMFH NGW + W ++ V GT++CLR+V I++ + VTH+CGA
Sbjct: 225 AAMGKKPVYLWTLPMFHCNGWCFPWSLSLVAGTHVCLRQVRQGPIWNALADEKVTHLCGA 284
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V++ L ++P + L V+ T+ A PP AVL GF V+H YGLTE G V
Sbjct: 285 PIVMSTLLNTPEDQKRKLTHEVEFFTAAAPPPEAVLAAMAEEGFNVTHLYGLTEVYGPAV 344
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
W W+ L +E+A LKARQGV + L D+ V+ P+T V DG++ GE++F+
Sbjct: 345 VNEWHEHWDELPTSEQAALKARQGVNYVALQDLAVLDPKTMQPVPADGETIGEVMFKGNV 404
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + WF++GD+GV H DGY+++KDRSKD+IISGGENISS E+E
Sbjct: 405 VMKGYLKNPSATQEAFA-GGWFHSGDLGVQHEDGYVQLKDRSKDIIISGGENISSIEIEE 463
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P I+ A+VA+ D WG+ PCAFV LK S TE II +C+ L + + ++
Sbjct: 464 VLYKHPEISAAAVVARPDDKWGETPCAFVELKENSSV--TETDIITYCKEHLASFKSPRT 521
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ D LPKT+TGKIQKFVLRE
Sbjct: 522 VVFTD-LPKTSTGKIQKFVLRE 542
>gi|403673157|ref|ZP_10935460.1| acyl-CoA synthetase [Acinetobacter sp. NCTC 10304]
gi|417546031|ref|ZP_12197117.1| AMP-binding enzyme [Acinetobacter baumannii OIFC032]
gi|421652004|ref|ZP_16092369.1| AMP-binding enzyme [Acinetobacter baumannii OIFC0162]
gi|421666158|ref|ZP_16106250.1| AMP-binding enzyme [Acinetobacter baumannii OIFC087]
gi|421671183|ref|ZP_16111165.1| AMP-binding enzyme [Acinetobacter baumannii OIFC099]
gi|424061123|ref|ZP_17798613.1| hypothetical protein W9K_02236 [Acinetobacter baumannii Ab33333]
gi|425747297|ref|ZP_18865307.1| AMP-binding enzyme [Acinetobacter baumannii WC-348]
gi|445459599|ref|ZP_21447622.1| AMP-binding enzyme [Acinetobacter baumannii OIFC047]
gi|400383919|gb|EJP42597.1| AMP-binding enzyme [Acinetobacter baumannii OIFC032]
gi|404666805|gb|EKB34735.1| hypothetical protein W9K_02236 [Acinetobacter baumannii Ab33333]
gi|408507125|gb|EKK08827.1| AMP-binding enzyme [Acinetobacter baumannii OIFC0162]
gi|410383480|gb|EKP36013.1| AMP-binding enzyme [Acinetobacter baumannii OIFC099]
gi|410388083|gb|EKP40522.1| AMP-binding enzyme [Acinetobacter baumannii OIFC087]
gi|425494185|gb|EKU60400.1| AMP-binding enzyme [Acinetobacter baumannii WC-348]
gi|444773793|gb|ELW97884.1| AMP-binding enzyme [Acinetobacter baumannii OIFC047]
Length = 542
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYKGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|188583870|ref|YP_001927315.1| AMP-dependent synthetase and ligase [Methylobacterium populi BJ001]
gi|179347368|gb|ACB82780.1| AMP-dependent synthetase and ligase [Methylobacterium populi BJ001]
Length = 544
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/444 (44%), Positives = 273/444 (61%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--VSATSSP 62
RLD ++ L H E+KL VD + + + AL + + V+ +DD S P
Sbjct: 104 RLDAAALAFCLDHGEAKLFIVDREFARIGREALDRAGVSPL----VIAYDDPEFSGEGGP 159
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P+F W P+ EWD ++LNYTSGTT PKGVV+ HRG ++++ ++
Sbjct: 160 LGEADDYESFLAAGDPDFDWAMPDDEWDAISLNYTSGTTGDPKGVVYHHRGAALLSLGNV 219
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I +P V+LWTLPMFH NGW + W ++ V GT++CLR+V P +Y+ + HGVTH+
Sbjct: 220 ITAGLPQHAVYLWTLPMFHCNGWCFPWTLSIVAGTHVCLRQVRAPAMYAALAEHGVTHLS 279
Query: 172 GALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V++ L ++P +PL V LT+ A PP AVL GF V+H YGLTET G
Sbjct: 280 GAPIVMSTLLNAPEDQKRPLPHRVHFLTAAAPPPEAVLAAMGEAGFNVTHLYGLTETYGP 339
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V AW +W+ LA ERA+ KARQGVR L +DV PET S+ DG S GE++FR
Sbjct: 340 AVVNAWHEEWDALAPDERAKKKARQGVRYPVLEGLDVRDPETMESLPADGTSLGEVMFRG 399
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + + WF +GD+GV H DGY+++KDRSKD+IISGGENISS EV
Sbjct: 400 NVVMRGYLKNPASTQAAFK-GGWFRSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEV 458
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L+ +P++ A+VA+ D WG+ PCAFV LK ++ T E ++ +CR RL Y
Sbjct: 459 EDALFKHPSVAAAAVVAKPDAKWGETPCAFVELK--EGREATSEELVAWCRERLAPYKLP 516
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
+ V+ ELPKT+TGK+QKFVLRE
Sbjct: 517 RHVVF-GELPKTSTGKVQKFVLRE 539
>gi|299533871|ref|ZP_07047238.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
gi|298718155|gb|EFI59145.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni S44]
Length = 548
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/442 (45%), Positives = 274/442 (61%), Gaps = 18/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K L VD + +PL AL L S T+ + + D V ++ +
Sbjct: 102 RLDAETLAFMLDHGEAKALIVDPEFAPLMARALKLRQS-TVPIYVIEVEDPVYGEAAEQI 160
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G F W P EWD +ALNYTSGTT +PKGVV+ HRG +S++++
Sbjct: 161 GAIDYESFVAQGDAGFDWQLPGDEWDAIALNYTSGTTGNPKGVVYHHRGAHNNAISNVLE 220
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P V+LWTLPMFH NGW + W +AA N+CLR+VD I+ I++HGV+H CGA
Sbjct: 221 WDMPKHAVYLWTLPMFHCNGWCFPWTVAARAAVNVCLRRVDAQAIFDAIRNHGVSHYCGA 280
Query: 174 LVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V ++L ++P+ P VK + +GA+PPA+++ E++GF ++H YGLTET G
Sbjct: 281 PIVHSLLVNAPAAMKQGVPAGVKAMVAGAAPPASMIEGMEAMGFDITHVYGLTETYGPAT 340
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA WN L ERARL +RQGVR V+ PET V HDGQ+ GEI+F+
Sbjct: 341 VCAKHESWNALDIGERARLNSRQGVRYHLQRSAAVLDPETMQPVPHDGQTMGEIMFQGNI 400
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
M GYLK+ + + R WF++GD+ V H DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 401 AMKGYLKNPQATQEAFR-GGWFHSGDLAVQHPDGYIQIKDRSKDIIISGGENISSIEVED 459
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D WG+ PCAF+ LK + T E II C+ L Y ++
Sbjct: 460 VLYRHPAVLAAAVVAKPDPKWGETPCAFIELK--AGAETTAEDIIAHCKKHLAGYKVPRA 517
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGKIQKF LR+
Sbjct: 518 VVF-GELPKTSTGKIQKFELRK 538
>gi|423196721|ref|ZP_17183304.1| hypothetical protein HMPREF1171_01336 [Aeromonas hydrophila SSU]
gi|404632175|gb|EKB28804.1| hypothetical protein HMPREF1171_01336 [Aeromonas hydrophila SSU]
Length = 540
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/438 (44%), Positives = 278/438 (63%), Gaps = 13/438 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL---ALAALSLFPSNTILPKPVL----IHDDVS 57
RLD + ++ + H++SK + VD + L ALA + L P + P+ + D+
Sbjct: 104 RLDAESMAFIFQHAQSKAVLVDREFGALVQKALALIELAPLLIAIDDPLYREGELVSDLD 163
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G+ + P+ EW ++LNYTSGTT +PKGVV+ HRG + V++++ W +P
Sbjct: 164 YEAFLAEGNGDEPGWLPQDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAVNNVLSWELP 223
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G ++CLR V +Y + H VTH C A +VL
Sbjct: 224 KHSVYLWTLPMFHCNGWCFPWTLAATAGVSVCLRHVQAAAVYEALHAHKVTHFCAAPIVL 283
Query: 178 NMLSSS-PSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
NML+++ P+ K LD P+K +T+GA+PPA V+ E++G V+H YGLTET G V C
Sbjct: 284 NMLNNADPALKRGLDHPIKAMTAGAAPPATVIAGMEAMGTAVTHVYGLTETYGPCVLCEP 343
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ W T +RLKARQGV + +M +++P +G V DG++ GEIV R +M G
Sbjct: 344 QRSWQGQDATTLSRLKARQGVASPLQGEMRIINPVSGEPVPQDGKTMGEIVLRGNVVMKG 403
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ S+ M + WF +GD+ V H DGY+EIKDRSKD+IISGGENISS EVE VLY
Sbjct: 404 YLKNPVASAEAMAEG-WFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVEDVLYR 462
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+P ++EVA++A D+ WG+ PCAFV LK ++ T+ +I FCR ++ H+ A K +I
Sbjct: 463 HPDVDEVAVIAMPDEKWGEVPCAFVKLK--EGRELTQAELIAFCREQMAHFKAPKRIIF- 519
Query: 416 DELPKTATGKIQKFVLRE 433
LPKT+TGK+QKF+LR+
Sbjct: 520 TPLPKTSTGKVQKFMLRQ 537
>gi|169797158|ref|YP_001714951.1| acyl-CoA synthetase [Acinetobacter baumannii AYE]
gi|213156052|ref|YP_002318097.1| acyl-CoA synthetase [Acinetobacter baumannii AB0057]
gi|215484621|ref|YP_002326856.1| AMP-binding enzyme family protein [Acinetobacter baumannii
AB307-0294]
gi|301346224|ref|ZP_07226965.1| acyl-CoA synthetase [Acinetobacter baumannii AB056]
gi|301510744|ref|ZP_07235981.1| acyl-CoA synthetase [Acinetobacter baumannii AB058]
gi|301596040|ref|ZP_07241048.1| acyl-CoA synthetase [Acinetobacter baumannii AB059]
gi|417573677|ref|ZP_12224531.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC-5]
gi|421642864|ref|ZP_16083375.1| AMP-binding enzyme [Acinetobacter baumannii IS-235]
gi|421645672|ref|ZP_16086136.1| AMP-binding enzyme [Acinetobacter baumannii IS-251]
gi|421657783|ref|ZP_16098031.1| AMP-binding enzyme [Acinetobacter baumannii Naval-83]
gi|421701242|ref|ZP_16140748.1| AMP-binding enzyme [Acinetobacter baumannii IS-58]
gi|421798709|ref|ZP_16234725.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC1]
gi|169150085|emb|CAM87979.1| putative AMP-dependent synthetase/ligase [Acinetobacter baumannii
AYE]
gi|213055212|gb|ACJ40114.1| acyl-CoA synthase [Acinetobacter baumannii AB0057]
gi|213987663|gb|ACJ57962.1| AMP-binding enzyme family protein [Acinetobacter baumannii
AB307-0294]
gi|400209245|gb|EJO40215.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC-5]
gi|404567844|gb|EKA72959.1| AMP-binding enzyme [Acinetobacter baumannii IS-58]
gi|408511430|gb|EKK13078.1| AMP-binding enzyme [Acinetobacter baumannii IS-235]
gi|408518300|gb|EKK19826.1| AMP-binding enzyme [Acinetobacter baumannii IS-251]
gi|408711572|gb|EKL56777.1| AMP-binding enzyme [Acinetobacter baumannii Naval-83]
gi|410412150|gb|EKP64010.1| AMP-binding enzyme [Acinetobacter baumannii Canada BC1]
Length = 542
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 283/442 (64%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDSEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I + V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V++PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLNPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|332856897|ref|ZP_08436306.1| CoA ligase [Acinetobacter baumannii 6013150]
gi|332867200|ref|ZP_08437465.1| CoA ligase [Acinetobacter baumannii 6013113]
gi|332726951|gb|EGJ58456.1| CoA ligase [Acinetobacter baumannii 6013150]
gi|332734139|gb|EGJ65271.1| CoA ligase [Acinetobacter baumannii 6013113]
Length = 547
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 283/442 (64%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 106 RLDAKTIAFMLEHAETKVLLVDSEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 163
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 164 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 223
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I + V + CGA
Sbjct: 224 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGA 283
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 284 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 343
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V++PET V +DG++ GEI+FR
Sbjct: 344 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLNPETMQPVPNDGETMGEIMFRGNI 403
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 404 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 462
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 463 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 520
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 521 VVI-TEIPKTSTGKLQKFILRE 541
>gi|387905774|ref|YP_006336112.1| 3-methylmercaptopropionyl-CoA ligase [Burkholderia sp. KJ006]
gi|387580666|gb|AFJ89381.1| 3-methylmercaptopropionyl-CoA ligase [Burkholderia sp. KJ006]
Length = 567
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/439 (45%), Positives = 265/439 (60%), Gaps = 14/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL---ALAALSLFPSNTILPKPVLIHDDVSATSS 61
RLD ++ +L H ++KLL D + S ALA L + P D+
Sbjct: 128 RLDADTIAFILGHGDAKLLITDREFSSTVKKALARLGRAIQVIDIDDPQFGEGDLLGEKD 187
Query: 62 -----PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
H F PE EW ++LNYTSGTT +PKGVV+ HRG ++ VS+ + W +
Sbjct: 188 YEALLQEAAHTEFSVAMPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWHL 247
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+LWTLPMFH NGW + W MA V GT++ LR I + I+ VTH C A VV
Sbjct: 248 DEDTTYLWTLPMFHCNGWCFPWTMALVAGTSVFLRHTRAERILAAIRTEAVTHFCAASVV 307
Query: 177 LNML-SSSPSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
LNM+ +++P K + VK++T GA PPA+V+ E +G+ V+H+YGLTE+ G VV C
Sbjct: 308 LNMINNAAPELKAGISHGVKVMTGGAPPPASVIAGMERMGWDVTHAYGLTESYGPVVQCV 367
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ WN L +ARLKARQGVR L + V P+T V DGQ+ GE+ R ++M
Sbjct: 368 WRDSWNALDLDAKARLKARQGVRGPALEAVMVASPDTLEPVPKDGQTLGEVFLRGNNVMK 427
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ + + WF+TGD+ V H DGYLEIKDRSKD+IISGGENISS E+E +LY
Sbjct: 428 GYLKNPDATVEAF-SGGWFHTGDLAVWHPDGYLEIKDRSKDIIISGGENISSIEIEDILY 486
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ E A+VA+ D WG+ PCAF++LK + TE II FCR RL H+ K+++
Sbjct: 487 SHPAVLEAAIVARPDDKWGETPCAFIALKAD--SAVTEADIIAFCRERLAHFKVPKTIVF 544
Query: 415 EDELPKTATGKIQKFVLRE 433
LPKTATGKIQKF LRE
Sbjct: 545 S-PLPKTATGKIQKFHLRE 562
>gi|417553785|ref|ZP_12204854.1| AMP-binding enzyme [Acinetobacter baumannii Naval-81]
gi|417560352|ref|ZP_12211231.1| AMP-binding enzyme [Acinetobacter baumannii OIFC137]
gi|421201550|ref|ZP_15658709.1| AMP-binding enzyme [Acinetobacter baumannii OIFC109]
gi|421454379|ref|ZP_15903728.1| AMP-binding enzyme [Acinetobacter baumannii IS-123]
gi|421634124|ref|ZP_16074743.1| AMP-binding enzyme [Acinetobacter baumannii Naval-13]
gi|421805860|ref|ZP_16241736.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-694]
gi|395522934|gb|EJG11023.1| AMP-binding enzyme [Acinetobacter baumannii OIFC137]
gi|395563582|gb|EJG25235.1| AMP-binding enzyme [Acinetobacter baumannii OIFC109]
gi|400213146|gb|EJO44103.1| AMP-binding enzyme [Acinetobacter baumannii IS-123]
gi|400390202|gb|EJP57249.1| AMP-binding enzyme [Acinetobacter baumannii Naval-81]
gi|408704842|gb|EKL50198.1| AMP-binding enzyme [Acinetobacter baumannii Naval-13]
gi|410408122|gb|EKP60097.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-694]
Length = 542
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWIAQGDANFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPIIEHYVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASATPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|375137115|ref|YP_004997765.1| acyl-CoA synthetase [Acinetobacter calcoaceticus PHEA-2]
gi|325124560|gb|ADY84083.1| acyl-CoA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 545
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/446 (45%), Positives = 275/446 (61%), Gaps = 27/446 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD K ++ +L H+ESK+L VD + LA ALSL P+ I I DV+ T
Sbjct: 101 RLDAKTIAFMLEHAESKVLLVDPEFVNLAREALSLIPNQHI------IVIDVADTEYEGE 154
Query: 63 -------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
G NF W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S
Sbjct: 155 NQFLGSFEYEEWIAQGDINFSWHLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAAS 214
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+++ + + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V +
Sbjct: 215 NILACGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAAHKVDY 274
Query: 170 ICGALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
CGA +VL+M+ + P K D V+++ +GA+PP A++ ++G V+H YGLTET
Sbjct: 275 FCGAPIVLSMILNLPKEKQANFDHHVEVMVAGAAPPVAIIEGMRNMGINVNHVYGLTETY 334
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G CA +S WN L+ E+A+L +RQGV M V+ PET V +DGQ+ GEI+F
Sbjct: 335 GPSALCASQSGWNELSIAEQAQLHSRQGVPYPLQDSMRVLDPETMEPVPNDGQTMGEIMF 394
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R +M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS
Sbjct: 395 RGNIVMKGYLKNPKATQEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSL 453
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE VLY +PA+ A+VA+ D W + PCAF+ LK + T E II C+ L +
Sbjct: 454 EVEDVLYKHPAVLTAAVVAKPDARWQEVPCAFIELK--MGTTATPEEIIAHCQKELARFK 511
Query: 408 AHKSVIIEDELPKTATGKIQKFVLRE 433
K V+I E+PKT+TGK+QKF+LRE
Sbjct: 512 VPKDVVI-TEIPKTSTGKLQKFILRE 536
>gi|260556062|ref|ZP_05828281.1| O-succinylbenzoate-CoA ligase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|260410117|gb|EEX03416.1| O-succinylbenzoate-CoA ligase [Acinetobacter baumannii ATCC 19606 =
CIP 70.34]
gi|452955848|gb|EME61245.1| acyl-CoA synthetase [Acinetobacter baumannii MSP4-16]
Length = 542
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W + A GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSITASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V++PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLNPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|126664342|ref|ZP_01735326.1| acyl-CoA synthase [Marinobacter sp. ELB17]
gi|126630668|gb|EBA01282.1| acyl-CoA synthase [Marinobacter sp. ELB17]
Length = 537
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 283/442 (64%), Gaps = 21/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD +S +L H E+++LF D + AA+S + P+LI + A S +
Sbjct: 100 RLDAATLSFILGHGEARVLFYDTDWEDVVRAAVSELEA-----PPLLISIESKAGVSDGL 154
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
+++ W +P EWD +ALNYTSGTT +PKGV++ HRG F+ +++ +
Sbjct: 155 AQQDYENLLLEGNAEASWQRPNDEWDAIALNYTSGTTGNPKGVIYHHRGAFLAAMTNSMV 214
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+++ + V+LWTLPMFH NGW+Y+W + AVGGT++CLR VD IY I+ + VTH+CGA
Sbjct: 215 FQMTPETVYLWTLPMFHCNGWAYTWAITAVGGTHVCLRDVDPMNIYRHIETYRVTHMCGA 274
Query: 174 LVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VV+NML + L R + GA+PP++V+ + E +GF ++H YGLTET G
Sbjct: 275 PVVMNMLLQELGREKLKLSRSTQFALGGAAPPSSVIRKAEEIGFQITHLYGLTETFGPSA 334
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C + +W L +RA +RQGV T GL ++ V+ +G SV DG++ GEI R +
Sbjct: 335 LCVPQPEWQALPLEQRALKMSRQGVSTHGLDEIAVLDVVSGESVPADGKTMGEICIRGNT 394
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ R N+WF+TGD+ V+H D Y+EI+DR+KDVIISGGENISS EVE
Sbjct: 395 VMKGYLKNPEATANAFR-NEWFHTGDLAVMHPDHYVEIRDRAKDVIISGGENISSLEVEE 453
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P ++E A+VA D+ WG+ PCAFV L + S++ T E II FCR +PH+ A +
Sbjct: 454 VLYRHPQVSEAAVVAMADEKWGEVPCAFVHL-IDDSEEITCEDIIAFCREHMPHFKAPRK 512
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ ELPKTATGKI+K +LR+
Sbjct: 513 VVF-GELPKTATGKIRKNILRD 533
>gi|445451424|ref|ZP_21444777.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-92]
gi|444755095|gb|ELW79688.1| AMP-binding enzyme [Acinetobacter baumannii WC-A-92]
Length = 542
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFLNLAREALSLIPNQHIIV--IDVADEEYKGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ ++++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHIEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|262281008|ref|ZP_06058791.1| acyl-CoA synthetase /AMP-acid ligase II [Acinetobacter
calcoaceticus RUH2202]
gi|262257908|gb|EEY76643.1| acyl-CoA synthetase /AMP-acid ligase II [Acinetobacter
calcoaceticus RUH2202]
Length = 545
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/442 (44%), Positives = 276/442 (62%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+ESK+L VD + LA ALSL P I+ + + DD + +
Sbjct: 101 RLDAKTIAFMLEHAESKVLLVDPEFVNLAREALSLIPDQHIIV--IDVADDEYEGENQFI 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF W PE EWD ++L+YTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWIAQGDINFVWHLPEDEWDAISLSYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K D V+++ +GA+PP A++ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQTDFDHHVEVMVAGAAPPVAIIEGMRNMGISVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA +S WN L+ E+A+L +RQGV M V+ PET V +DGQ+ GEI+FR
Sbjct: 339 LCASQSGWNELSIAEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGQTMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS E+E
Sbjct: 399 VMKGYLKNPKATQEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEIED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D W + PCAF+ LK + T E II C+ L + K
Sbjct: 458 VLYRHPAVLTAAVVAKPDARWQEVPCAFIELK--MGATATPEEIIAHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|192291495|ref|YP_001992100.1| acyl-CoA synthetase [Rhodopseudomonas palustris TIE-1]
gi|192285244|gb|ACF01625.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
TIE-1]
Length = 549
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/449 (44%), Positives = 275/449 (61%), Gaps = 22/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H +K++ VD + S + AL L PKP++I DD S
Sbjct: 105 RLDAAAIAFQLDHGGAKIILVDPEFSSVVAEALKLMTK----PKPLVIDVDDKMYPGSHR 160
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P F +PE EWD ++L YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGELEYEYAVASGDPTFAGHRPEEEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W +AA G N+CLRKVD I+ +I HGVTH+CG
Sbjct: 221 AGNLGQHPVYLWTLPMFHCNGWCFPWTLAAAAGINVCLRKVDPAKIFELIPKHGVTHMCG 280
Query: 173 ALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P +PV L +GA+PP AVL E++G ++H YGLTE G
Sbjct: 281 APIVYNALINAPEAPKGAATKPVVGLIAGAAPPMAVLAGAETIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERA+LK RQGV + V++PET V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDELPVAERAKLKRRQGVPYPMQEAVTVLNPETMQEVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + + WF+TGD+GV+ +DGY+ IKDRSKD+IISGGEN+SS EVE
Sbjct: 401 IVMKGYLKNEKATKEALA-GGWFHTGDLGVLDADGYVIIKDRSKDIIISGGENVSSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PAI A+VA+ D WG+ PCAFV LK S TE II +CR LP + K
Sbjct: 460 DVLYKHPAILFAAVVAKPDPKWGEVPCAFVELKDGASA--TEAEIIAYCREHLPGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
S++ +PKT+TGKIQKF+LR+ V +
Sbjct: 518 SIVF-SAIPKTSTGKIQKFMLRDQVKSAK 545
>gi|297183599|gb|ADI19726.1| hypothetical protein [uncultured bacterium EB000_36F02]
Length = 542
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 274/446 (61%), Gaps = 15/446 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH---------DD 55
RLD K +S +L HS++K+L VD Q AL + + D
Sbjct: 101 RLDSKTISYILDHSDAKVLIVDRQFHEAISKALENVKNKIRIIDIDDKDIDTSSFKKIGD 160
Query: 56 VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
+ S G N+KW +P+ EW ++L YTSGTT +PKGVV HRG +++ S W
Sbjct: 161 LEYESFLNTGDENYKWKKPKDEWQAISLGYTSGTTGNPKGVVCHHRGSYLMATGSATAWN 220
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+PN+ FL+T+PMFH NGW Y+W M+ + G ICLR +DV I+ +I + VTH GA +
Sbjct: 221 MPNKLNFLYTVPMFHCNGWCYTWTMSMLHGRVICLRNIDVKKIFELIDKYDVTHFGGAPI 280
Query: 176 VLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
VLNM++++P K L R V +LT+GA PP+ + + ++LGF V H YGLTET G ++ C
Sbjct: 281 VLNMIANTPKEHQKKLKRKVHVLTAGAPPPSIIFEKMQNLGFDVMHVYGLTETYGHILQC 340
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
AW +W L ++ ++ARQGV L V+ PET + DG++ GEI+ R +M
Sbjct: 341 AWNDEWENLEQEKQNEIRARQGVIYPNLEGAVVMDPETMKPLPKDGKTMGEIMIRGNVVM 400
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY KD+E + M+ WF++GD+ V + +GY++I+DRSKD+IISGGENISS E+E+ +
Sbjct: 401 KGYYKDKEATEKSMK-GGWFHSGDLAVTYPNGYIKIQDRSKDIIISGGENISSIEIENTI 459
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
+PA++ A+VA+ D+ WG+ PCAFV L KK TEE II+FCR L + KSV+
Sbjct: 460 AKHPAVSLAAVVAKPDEKWGETPCAFVELI--DGKKATEEEIIKFCRETLAGFKLPKSVV 517
Query: 414 IEDELPKTATGKIQKFVLREIVNAVN 439
LPKT+TGKIQKF LR+ V +N
Sbjct: 518 F-SPLPKTSTGKIQKFELRKKVKELN 542
>gi|72383937|ref|YP_293291.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
gi|72123280|gb|AAZ65434.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 558
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/445 (46%), Positives = 269/445 (60%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD--DVSATSSP 62
RLD VS +L HSE++LLFVD Q + +A AA++ +L +P+ + D D S
Sbjct: 102 RLDAAAVSFILRHSETRLLFVDQQFAEVARAAIA------VLGEPITVVDITDPEVAGSR 155
Query: 63 TVGHPNFKWVQ-----------PESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
VG ++ P SEWD +ALNYTSGTT +PKGVV+ HRG ++ + L
Sbjct: 156 PVGRIEYESFLASAPDTPDIRLPLSEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALGQL 215
Query: 112 IDWRIP-NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ + + PV+LWTLP+FH NGW Y+W +AAVG T ICLRKV IY I +H VTH
Sbjct: 216 VNAELSGDAPVYLWTLPLFHCNGWCYAWALAAVGATQICLRKVSGATIYDAIANHDVTHF 275
Query: 171 CGALVVLNMLSSS--PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
C A VL+ L S PS P RP+++L+ GASPP AV R LGF V H YG+TE G
Sbjct: 276 CCAPTVLSFLIESVPPSWVPPARPIRVLSGGASPPPAVFRRLIELGFRVQHVYGMTEMHG 335
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C + W L + E RQGVRT+ + +M V P+T V DG + GEI+ R
Sbjct: 336 VATICQSQEAWQALPEEEHLVHLTRQGVRTVVMNEMMVADPKTLSPVSRDGSAMGEILLR 395
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GY K+ + W++TGD+ VVH+DGY+EIKDRSKD+IISGGENISS E
Sbjct: 396 GNLAMKGYFKNASATEEAFAGG-WYHTGDLAVVHADGYIEIKDRSKDIIISGGENISSVE 454
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +PA+ A+VA D WG+ PCA V LK +L+ II FCRARLP + A
Sbjct: 455 VEDVLYEHPAVAGAAVVAVPDPRWGEVPCAIVELKADLAGGVNASEIISFCRARLPGFKA 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
+ VI D L +TATGK+QKF LRE
Sbjct: 515 PQHVIF-DSLARTATGKLQKFKLRE 538
>gi|107027251|ref|YP_624762.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia AU
1054]
gi|116691355|ref|YP_836888.1| AMP-dependent synthetase/ligase [Burkholderia cenocepacia HI2424]
gi|105896625|gb|ABF79789.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia AU
1054]
gi|116649355|gb|ABK09995.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
HI2424]
Length = 545
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/439 (45%), Positives = 265/439 (60%), Gaps = 14/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL---ALAALSLFPSNTILPKPVLIHDDVSATSS 61
RLD ++ +L H ++KLL D + S ALA L + P D+
Sbjct: 106 RLDADTIAFILGHGDAKLLITDREFSSTVKKALARLGRAIQVIDIDDPQFGEGDLLGEKD 165
Query: 62 -----PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
H F PE EW ++LNYTSGTT +PKGVV+ HRG ++ VS+ + W +
Sbjct: 166 YEALLQEAAHTEFSVAMPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWHL 225
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+LWTLPMFH NGW + W MA V GT++ LR I + I+ VTH C A VV
Sbjct: 226 DEDTTYLWTLPMFHCNGWCFPWTMALVAGTSVFLRHTRAERILAAIRTEAVTHFCAASVV 285
Query: 177 LNML-SSSPSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
LNM+ +++P K + VK++T GA PPA+V+ E +G+ V+H+YGLTE+ G VV C
Sbjct: 286 LNMINNAAPELKAGIRHGVKVMTGGAPPPASVIAGMERMGWDVTHAYGLTESYGPVVQCV 345
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ WN L +ARLKARQGVR L + V P+T V DGQ+ GE+ R ++M
Sbjct: 346 WRDSWNALDLDAKARLKARQGVRGPALEAVMVASPDTLEPVPKDGQTLGEVFLRGNNVMK 405
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ + + WF+TGD+ V H DGYLEIKDRSKD+IISGGENISS E+E +LY
Sbjct: 406 GYLKNSDATVEAF-SGGWFHTGDLAVWHPDGYLEIKDRSKDIIISGGENISSIEIEDILY 464
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ E A+VA+ D WG+ PCAF++LK + TE II FCR RL H+ K+++
Sbjct: 465 SHPAVLEAAIVARPDDKWGETPCAFIALKDD--SAVTEADIIAFCRERLAHFKVPKTIVF 522
Query: 415 EDELPKTATGKIQKFVLRE 433
LPKTATGKIQKF LRE
Sbjct: 523 S-PLPKTATGKIQKFHLRE 540
>gi|312114411|ref|YP_004012007.1| AMP-dependent synthetase and ligase [Rhodomicrobium vannielii ATCC
17100]
gi|311219540|gb|ADP70908.1| AMP-dependent synthetase and ligase [Rhodomicrobium vannielii ATCC
17100]
Length = 540
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/450 (42%), Positives = 280/450 (62%), Gaps = 28/450 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H+E+K+L D + + + AL L KPV+I D + T P +
Sbjct: 102 RLDAANIAFMLDHAETKVLITDTEYAKVVAEALKLSEH-----KPVII--DYADTEFPGL 154
Query: 65 G---------------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
G P F W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ ++
Sbjct: 155 GARLSDVEYEDFIAGGDPEFAWKMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAYLTSLG 214
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+ + +I P +LWTLPMFH +GW + W + VGGT +CLR V I++ + + +TH
Sbjct: 215 NTLAGQIGKHPNYLWTLPMFHCDGWCFGWTIPLVGGTQVCLRYVRPDAIWASLYENEITH 274
Query: 170 ICGALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
+CGA +V++ + ++P + + L + V+ LT+ A PP AVL GF V+H YGLTET
Sbjct: 275 LCGAPIVMSTILNAPADAKRKLKQKVQFLTAAAPPPEAVLAEMREAGFNVTHVYGLTETY 334
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G V WK +W+ L +A+ KARQGVR + L D+ V+ P T V DG++ GE++F
Sbjct: 335 GPSVVNEWKGEWDALDGGAQAQKKARQGVRYVPLEDLSVIDPLTMQHVPADGETLGEVMF 394
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R +M GYLK+++ + + WF++GD+GV+H DGY+++KDRSKD+IISGGENISS
Sbjct: 395 RGNVVMKGYLKNKDATDDALA-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSI 453
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE VL+ +PA+ ++VA+ D+ WG+ PCAF+ LK T E II +CR L Y
Sbjct: 454 EVEDVLFKHPAVQAASVVAKHDEKWGETPCAFIELK--PGATVTAEEIIAWCRQHLAAYK 511
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREIVNA 437
+ V+ +ELPKT+TGKIQK++LRE+ +
Sbjct: 512 CPRHVVF-NELPKTSTGKIQKYILREMAKS 540
>gi|254501248|ref|ZP_05113399.1| AMP-binding enzyme, putative [Labrenzia alexandrii DFL-11]
gi|222437319|gb|EEE43998.1| AMP-binding enzyme, putative [Labrenzia alexandrii DFL-11]
Length = 543
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/446 (42%), Positives = 276/446 (61%), Gaps = 19/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ L H+ K+L D + + + AL L T+ P + D S +
Sbjct: 105 RLDAAIIAFQLDHANCKVLITDREYASVMKEALEL---ATVKPTVIDYSDPEFPQDSEQL 161
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G F W P+ EWD + LNYTSGTT +PKGVV+ HRG +++ +++I
Sbjct: 162 GSLDYEDFLQSGDTEFTWSLPDDEWDAITLNYTSGTTGNPKGVVYHHRGAYLLAQANVIT 221
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ PV+LWTLPMFH NGW + W ++ V GT++CLR V ++ +I GVTH+CGA
Sbjct: 222 ASMAKHPVYLWTLPMFHCNGWCFPWSLSIVAGTHVCLRWVRPKAMWDLIADEGVTHLCGA 281
Query: 174 LVVLN-MLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
++++ +L++ + LDR V+ T+ A PP +VL ++ GF V+H YGLTE G V
Sbjct: 282 PIIMSTLLNAGDDKRDLDREVEFFTAAAPPPESVLAAMKTAGFNVTHLYGLTEVYGPAVV 341
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
WK +W++L ++A+ KARQGVR + L D+ V++PET V DGQ+ GE++FR +
Sbjct: 342 NDWKGEWDSLPLEQQAQKKARQGVRYVALEDLKVLNPETMEPVPADGQTIGEVMFRGNVV 401
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+Q+ + + WF++GD+GV+H DGY+++KDRSKD+IISGGENISS EVE V
Sbjct: 402 MKGYLKNQDATDEAFK-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVEDV 460
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P + A+VA+ D+ WG+ PCAFV LK TE ++ FC+ L + + + +
Sbjct: 461 LYKHPDVQAAAVVARPDEKWGETPCAFVELK--SGSDTTENELMAFCKEHLASFKSPRKI 518
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ D LPKT+TGKIQKF LRE A+
Sbjct: 519 VFCD-LPKTSTGKIQKFALREQAKAL 543
>gi|421625754|ref|ZP_16066600.1| AMP-binding enzyme [Acinetobacter baumannii OIFC098]
gi|408697848|gb|EKL43354.1| AMP-binding enzyme [Acinetobacter baumannii OIFC098]
Length = 542
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 281/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP V+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVTVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|193076378|gb|ABO11042.2| putative AMP-dependent synthetase/ligase [Acinetobacter baumannii
ATCC 17978]
Length = 542
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWIAQGDANFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPIIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|145299087|ref|YP_001141928.1| acyl-CoA synthetase/AMP-acid ligase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418357552|ref|ZP_12960244.1| acyl-CoA synthetase/AMP-acid ligase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142851859|gb|ABO90180.1| acyl-CoA synthetase/AMP-acid ligase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356689141|gb|EHI53687.1| acyl-CoA synthetase/AMP-acid ligase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 540
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/444 (42%), Positives = 285/444 (64%), Gaps = 25/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ + H++S+++ VD + + AL+L + +P+LI DD
Sbjct: 104 RLDAESMAFIFQHAQSRVVLVDREFGAVVRKALALVKT-----QPLLIAIDDPLYREGEL 158
Query: 64 VGHPNFK------------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
+ +++ W+ P+ EW ++LNYTSGTT +PKGVV+ HRG + ++++
Sbjct: 159 ISELDYEQFLAQGNGDEPCWL-PDDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNV 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W +P V+LWTLPMFH NGW + W +AA G ++CLR V I+ ++ H +H C
Sbjct: 218 LSWELPKHSVYLWTLPMFHCNGWCFPWTLAATAGVSVCLRHVQARAIFDALREHKASHFC 277
Query: 172 GALVVLNMLSSS-PSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
A +VLNML+++ P+ K L+ P+K++T+GA+PPA V+ E++G V+H YGLTET G
Sbjct: 278 AAPIVLNMLNNADPALKYGLNHPIKVMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V C + W T +RLKARQGV + +M V++P +G SV DG++ GEIV R
Sbjct: 338 CVLCEPQRSWQGQDATALSRLKARQGVASPLQGEMRVINPVSGESVPQDGKTLGEIVLRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + S+ M + WF +GD+ V H DGY+E+KDRSKD+IISGGENISS EV
Sbjct: 398 NVVMKGYLKNPDASAEAMAEG-WFRSGDLAVWHPDGYVEVKDRSKDIIISGGENISSLEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +P ++EVA++A D+ WG+ PCAFV LK ++ ++ +I FCR ++PH+ A
Sbjct: 457 EDVLYRHPDVDEVAVIAMPDEKWGEVPCAFVKLK--EGRELSQVELIAFCREQMPHFKAP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K +I LPKT+TGK+QK++LR+
Sbjct: 515 KRIIF-TPLPKTSTGKVQKYMLRQ 537
>gi|294649363|ref|ZP_06726794.1| o-succinylbenzoate--CoA ligase [Acinetobacter haemolyticus ATCC
19194]
gi|292824733|gb|EFF83505.1| o-succinylbenzoate--CoA ligase [Acinetobacter haemolyticus ATCC
19194]
Length = 547
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 279/442 (63%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + P+A AL+L + I+ + + D +
Sbjct: 101 RLDAKTIAFMLEHAEAKVLLVDPEFRPIAEEALTLIHQDIIV---IDVFDSEYEGEQIAL 157
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F+W+ P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 158 GQYEYESWIAQGDPEFEWLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 217
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLR+VD +I+ I H V + CGA
Sbjct: 218 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRRVDPALIFKYIAEHKVDYFCGA 277
Query: 174 LVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+ML ++P + D V+++ +GA+PP A++ ++G V+H YGLTET G
Sbjct: 278 PIVLSMLINAPLEQKVAFDHHVEVMVAGAAPPVAIIEGMRNIGINVNHVYGLTETYGPSA 337
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ E+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 338 LCASQAGWSELSIQEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 397
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 398 VMKGYLKNPQATEEAFK-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 456
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D W + PCAF+ LK + P E II C+ L + K
Sbjct: 457 VLYRHPAVMTAAVVAKPDPRWQEVPCAFIELKQGSTTSPEE--IILHCQKELARFKVPKD 514
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 515 VVI-TEIPKTSTGKLQKFILRE 535
>gi|407975350|ref|ZP_11156256.1| AMP-dependent synthetase and ligase [Nitratireductor indicus C115]
gi|407429435|gb|EKF42113.1| AMP-dependent synthetase and ligase [Nitratireductor indicus C115]
Length = 547
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/452 (43%), Positives = 275/452 (60%), Gaps = 25/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD ++ L H+ESK++ VD + S + AL L ++ P + D A +P
Sbjct: 103 RLDAPIIAFQLDHAESKVVIVDREFSSVMKEALEL---ASVKPLVIDYDDPEYAQDAPHP 159
Query: 63 --------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
+ G F W P+ EWD +ALNYTSGTT +PKGVV+ HRG ++
Sbjct: 160 KGERIGSIDYEAFVSSGDAGFAWSLPDDEWDAIALNYTSGTTGNPKGVVYHHRGAALMAY 219
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
++ + + + V+LWTLPMFH NGW + W +A GGT++CLR V +Y I HGVT
Sbjct: 220 ANTVHAALGSGAVYLWTLPMFHCNGWCFPWTLALTGGTHVCLRWVRAKAMYDAIADHGVT 279
Query: 169 HICGALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+CGA +V++ L ++P + + V T+ A PP VL GFVV+H YGLTET
Sbjct: 280 HLCGAPIVMSTLLNAPDDQKRGFTQTVTFNTAAAPPPETVLSGMARAGFVVTHLYGLTET 339
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G V WK++W+ L D RA KARQGVR L D+ V+ PET + DG++ GE++
Sbjct: 340 YGPAVVNEWKAEWDELDDAGRASRKARQGVRYAALDDLTVMDPETMVETPRDGETIGEVM 399
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
FR +M GYLK++ + WF++GD+GV+H DGY+++KDRSKD+IISGGENISS
Sbjct: 400 FRGNIVMKGYLKNKVATGEAFA-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISS 458
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
EVE LY +PA+ +VA+ D+ WG+ P AFV LK ++ TEE II CR+ L H+
Sbjct: 459 IEVEDALYKHPAVAACGVVAKSDERWGETPIAFVELK--EGRQATEEEIIAHCRSLLAHF 516
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
KSVI E+P+T+TGKIQKF LR++V ++
Sbjct: 517 KCPKSVIFS-EIPRTSTGKIQKFRLRDLVKSL 547
>gi|332284207|ref|YP_004416118.1| AMP-dependent synthetase and ligase [Pusillimonas sp. T7-7]
gi|330428160|gb|AEC19494.1| AMP-dependent synthetase and ligase [Pusillimonas sp. T7-7]
Length = 553
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 198/450 (44%), Positives = 276/450 (61%), Gaps = 24/450 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDV----SATS 60
RLD K V+ +L H E+K++ VD + +P ALSL S+ P+ + D + ++
Sbjct: 106 RLDPKMVAFMLDHGEAKVVIVDPEFAPTISKALSLRTSSA----PIKVIDAADSLYTGSN 161
Query: 61 SP----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
SP G P F W P +EWD +ALNYTSGTT +PKGVV+ HRG +S+
Sbjct: 162 SPIGDFEYEDFIAGGDPEFAWELPGNEWDAIALNYTSGTTGNPKGVVYHHRGAATAAISN 221
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW + W +AA G N+CLR+V+ I+ I+ HGV H
Sbjct: 222 ILEWDMPKHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRRVEPQAIFDAIREHGVDHY 281
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V ML ++P + P VK + +GA+PPA+++ E +GF + H YGLTET G
Sbjct: 282 CGAPIVHGMLVNAPDSLKQGVPQGVKAMVAGAAPPASMIEGMERMGFNLLHVYGLTETYG 341
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA W L ERARL +RQGV + V++PET SV DG++ GEI+FR
Sbjct: 342 PATVCAQHHNWGDLDIGERARLNSRQGVTYHLERGIAVMNPETMQSVPADGETMGEIMFR 401
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ + + + WF++GD+ V+ DGY++IKDRSKD+IISGGENISS E
Sbjct: 402 GNITMKGYLKNPKATQEAL-SGGWFHSGDLAVMDPDGYIKIKDRSKDIIISGGENISSIE 460
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE +LY +P + A+VA+ D WG+ PCAF+ LK + T E+IIE C+ + +
Sbjct: 461 VEDILYRHPDVLAAAVVARSDPRWGETPCAFIELK--DGAQATPESIIEHCKKHMASFKV 518
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+ V+ ELPKT+TGKIQKF LR+ A+
Sbjct: 519 PRKVVF-CELPKTSTGKIQKFELRKQAEAL 547
>gi|421675912|ref|ZP_16115831.1| AMP-binding enzyme [Acinetobacter baumannii OIFC065]
gi|421692560|ref|ZP_16132211.1| AMP-binding enzyme [Acinetobacter baumannii IS-116]
gi|404559846|gb|EKA65097.1| AMP-binding enzyme [Acinetobacter baumannii IS-116]
gi|410381429|gb|EKP33995.1| AMP-binding enzyme [Acinetobacter baumannii OIFC065]
Length = 542
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I + V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|134294093|ref|YP_001117829.1| AMP-dependent synthetase/ligase [Burkholderia vietnamiensis G4]
gi|134137250|gb|ABO58364.1| AMP-dependent synthetase and ligase [Burkholderia vietnamiensis G4]
Length = 567
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/439 (45%), Positives = 265/439 (60%), Gaps = 14/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL---ALAALSLFPSNTILPKPVLIHDDVSATSS 61
RLD ++ +L H ++KLL D + S ALA L + P D+
Sbjct: 128 RLDADTIAFILGHGDAKLLITDREFSSTVKKALARLGRAIQVIDIDDPQFGEGDLLGEKD 187
Query: 62 -----PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
H F P+ EW ++LNYTSGTT +PKGVV+ HRG ++ VS+ + W +
Sbjct: 188 YEALLQEAAHTEFSVAMPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAVSNALSWHL 247
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+LWTLPMFH NGW + W MA V GT++ LR I + I+ VTH C A VV
Sbjct: 248 DEDTTYLWTLPMFHCNGWCFPWTMALVAGTSVFLRHTRAERILAAIRTEAVTHFCAASVV 307
Query: 177 LNML-SSSPSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
LNM+ +++P K + VK++T GA PPA+V+ E +G+ V+H+YGLTE+ G VV C
Sbjct: 308 LNMINNAAPELKAGISHGVKVMTGGAPPPASVIAGMERMGWDVTHAYGLTESYGPVVQCV 367
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ WN L +ARLKARQGVR L + V P+T V DGQ+ GE+ R ++M
Sbjct: 368 WRDSWNALDLDAKARLKARQGVRGPALEAVMVASPDTLEPVPKDGQTLGEVFLRGNNVMK 427
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ + + WF+TGD+ V H DGYLEIKDRSKD+IISGGENISS E+E +LY
Sbjct: 428 GYLKNPDATVEAF-SGGWFHTGDLAVWHPDGYLEIKDRSKDIIISGGENISSIEIEDILY 486
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ E A+VA+ D WG+ PCAF++LK + TE II FCR RL H+ K+++
Sbjct: 487 SHPAVLEAAIVARPDDKWGETPCAFIALKAD--SAVTEADIIAFCRERLAHFKVPKTIVF 544
Query: 415 EDELPKTATGKIQKFVLRE 433
LPKTATGKIQKF LRE
Sbjct: 545 S-PLPKTATGKIQKFHLRE 562
>gi|242035975|ref|XP_002465382.1| hypothetical protein SORBIDRAFT_01g037600 [Sorghum bicolor]
gi|241919236|gb|EER92380.1| hypothetical protein SORBIDRAFT_01g037600 [Sorghum bicolor]
Length = 581
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/454 (44%), Positives = 274/454 (60%), Gaps = 28/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSN--TILPKPVLI---------- 52
RL+ + ++ LL HS ++++ VD + LA +L + + P+LI
Sbjct: 114 RLNAETIAFLLEHSVAEVVMVDQEFFTLAEESLKIIAKKKTSAFRPPILIVIGDPTCDPK 173
Query: 53 -------HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
+ G P F W P+ EW +AL YTSGTTSSPKGVV HRG ++
Sbjct: 174 SLQYALGKGAIEYEEFLKTGDPEFNWKPPKDEWQSIALGYTSGTTSSPKGVVLHHRGAYL 233
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ +S I W +P V+LWTLPMFH NGW Y+W +AA GT+ICLR+V IY I
Sbjct: 234 MALSVAIVWGMPEGAVYLWTLPMFHCNGWCYTWALAAFCGTSICLRQVSTKAIYEGITKQ 293
Query: 166 GVTHICGALVVLNMLSSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
GVTH C A VVLN L ++P+++ PL V + +GA+P ++L GF V+H+YG
Sbjct: 294 GVTHFCAAPVVLNNLINAPASETFLPLPHVVNVNVAGAAPTPSLLAALSIRGFRVTHTYG 353
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
L+ET G CAWK +W+ L ER+RL RQG+R I + +DVV P+T V DG+S
Sbjct: 354 LSETYGPSTVCAWKPEWDELPLEERSRLHCRQGIRYIAMEGLDVVDPKTMAPVPADGKSY 413
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEIV R ++M GYLK+ + ++ W+++GD+GV H DGY+E++DR KDVIISGGE
Sbjct: 414 GEIVLRGNAVMKGYLKNPKANAEAFA-GGWYHSGDLGVKHPDGYVEVRDRMKDVIISGGE 472
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA----IIEF 398
NISS EVE V+ +PA+ E ++VA+ D+ WG+ PCAFV+LK + E A I+ F
Sbjct: 473 NISSLEVEKVVCTHPAVLEASVVARADERWGESPCAFVTLKDGAADGSDEAALANDIMRF 532
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
CR R+P Y KSVI LPKTATGKI+K LR
Sbjct: 533 CRERMPGYWVPKSVIF-GPLPKTATGKIKKHELR 565
>gi|226944611|ref|YP_002799684.1| acyl-CoA synthetase [Azotobacter vinelandii DJ]
gi|226719538|gb|ACO78709.1| acyl-activating enzyme [Azotobacter vinelandii DJ]
Length = 540
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 274/449 (61%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L H E+K+L D + + AA+ + L P L+ D
Sbjct: 101 RLDAEAIAFMLQHGEAKVLIADREYQEVIHAAIGM------LDHPPLLIDVDDPEYGEGL 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G P F W P+ EW ++LNYTSGTT +PKGVV+ HRG ++ + +
Sbjct: 155 PISDLEYEALLAEGDPAFAWQWPDDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I H VTH+C
Sbjct: 215 MVWAMGNHPVYLWTLPMFHCNGWCYPWTVTALAGAHVFLRRVDPQKILTLIHEHRVTHLC 274
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTE G
Sbjct: 275 GAPIVLNALVNMPDSAKAAIDHPVHAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTEVYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW +W+ L ERAR+KARQGVR L + V P+T V DG + GEI R
Sbjct: 335 VTVCAWHEEWDELPLDERARIKARQGVRYPTLEGVMVADPQTLEPVPRDGDTIGEIFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ ++ + WF+TGD+ V H DGY+EIKDR KD++ISGGENIS+ EV
Sbjct: 395 NTVMKGYLKNPSATAEAF-EGGWFHTGDLAVWHPDGYVEIKDRLKDIVISGGENISTIEV 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY + + E A+VA+ D+ WG+ PCAFV+LK ++ +E II FCR L +
Sbjct: 454 EGVLYRHHGVLEAAVVARPDEKWGETPCAFVTLK-AGHERTSEAEIIAFCREHLAGFKIP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
+ V+ ELPKT+TGKIQK+VLR+ A+
Sbjct: 513 RRVVF-SELPKTSTGKIQKYVLRDRARAL 540
>gi|163758844|ref|ZP_02165931.1| acyl-CoA synthase [Hoeflea phototrophica DFL-43]
gi|162284134|gb|EDQ34418.1| acyl-CoA synthase [Hoeflea phototrophica DFL-43]
Length = 556
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/451 (44%), Positives = 273/451 (60%), Gaps = 33/451 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + ++ L H+E+K+L VD + +A+ KP++I D T P
Sbjct: 109 RLDAQAIAFQLDHAETKVLIVDRE-----FSAVMAEALALAAAKPLVI--DYDDTEYPDD 161
Query: 63 ------------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
+ G P+F P+ EWD ++LNYTSGTT +PKGVV+ HRG
Sbjct: 162 APFAKGERIGTHDYDTFVSAGAPDFIRSAPDDEWDSVSLNYTSGTTGNPKGVVYHHRGAA 221
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
++ S++I + PV+LWTLPMFH NGW + W + V GT++CLR V +Y I
Sbjct: 222 LMGYSNVIASGMGRHPVYLWTLPMFHCNGWCFPWTLGVVAGTHVCLRWVRAKAMYDAIAD 281
Query: 165 HGVTHICGALVVLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
HGVTH+CGA +V++ L ++P T+ D + V T+ A PP AVL GF V H YG
Sbjct: 282 HGVTHLCGAPIVMSTLLNAPETEKRDFSQTVSFNTAAAPPPEAVLAGMADAGFEVVHLYG 341
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G V WKS+W+ L +ER KARQGVR L D+ V+ PET + DG++
Sbjct: 342 LTETYGPAVVNEWKSEWSKLDRSERTARKARQGVRYPALEDLAVLDPETMENTPADGETI 401
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE++FR +M GYLK+ E S+ R WF++GD+GV+H DGYL++KDRSKD+IISGGE
Sbjct: 402 GEVMFRGNIVMKGYLKNPEASAEAFR-GGWFHSGDLGVMHPDGYLQLKDRSKDIIISGGE 460
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVE LY +PAI A+VA+ D WG+ PCAFV L+ + +E +IE CR
Sbjct: 461 NISSIEVEDALYKHPAIMAAAVVARPDDKWGETPCAFVELR--PGQTLSEAEVIEHCRGL 518
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
L + +SV+ E+PKT+TGKIQKF+LRE
Sbjct: 519 LARFKCPRSVVFR-EVPKTSTGKIQKFLLRE 548
>gi|330826137|ref|YP_004389440.1| o-succinylbenzoate--CoA ligase [Alicycliphilus denitrificans K601]
gi|329311509|gb|AEB85924.1| o-succinylbenzoate--CoA ligase [Alicycliphilus denitrificans K601]
Length = 548
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 269/445 (60%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVL---IHDDVSATSS 61
RLD + ++ +L H E++ + VD + +P+ AL+L S P+L + D V ++
Sbjct: 102 RLDPETIAFMLDHGEARAVIVDPEFAPVMARALALRQSKA----PLLLIDVEDAVYGAAA 157
Query: 62 P-----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G P F W P EWD +ALNYTSGTT +PKGVV+ HRG I +S+
Sbjct: 158 ERLGTQTYEEFLAAGDPQFAWELPGDEWDAIALNYTSGTTGNPKGVVYHHRGAAINAISN 217
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW + W +AA G N+CLR+V+ I+ ++ HGVTH
Sbjct: 218 VLEWDMPKHSVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRRVEAQAIFDAMRSHGVTHY 277
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V +L ++P+ P VK + +GA+PPA+++ E LGF ++H YGLTE G
Sbjct: 278 CGAPIVHGLLVNAPAAMKEGVPAGVKAMVAGAAPPASMIEGMEKLGFDLTHVYGLTEVYG 337
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA WN L ERARL ARQGVR V+ PET V DG++ GEI+FR
Sbjct: 338 PATVCAKHDAWNALDVGERARLNARQGVRYHLQRAAAVLDPETMQPVPRDGETMGEIMFR 397
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ + R WF++GD+ V + DGY++IKDRSKD+IISGGENISS E
Sbjct: 398 GNIAMKGYLKNPAATGDAFR-GGWFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIE 456
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +P + A+VA+ D WG+ PCAFV LK + T E I+ C+ L +
Sbjct: 457 VEDVLYRHPDVLAAAVVAKPDPKWGETPCAFVELK--AGAQATPEDIVAHCKKHLAGFKV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++V+ ELPKT+TGKIQKF LR
Sbjct: 515 PRAVVF-GELPKTSTGKIQKFELRR 538
>gi|421808089|ref|ZP_16243946.1| AMP-binding enzyme [Acinetobacter baumannii OIFC035]
gi|410416268|gb|EKP68043.1| AMP-binding enzyme [Acinetobacter baumannii OIFC035]
Length = 542
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I + V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKNGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|254563500|ref|YP_003070595.1| AMP-dependent synthetase/acyl-CoA ligase [Methylobacterium
extorquens DM4]
gi|254270778|emb|CAX26783.1| putative AMP-dependent synthetase/acyl-CoA ligase [Methylobacterium
extorquens DM4]
Length = 545
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 274/443 (61%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--VSATSSP 62
RLD ++ L H E+K+ VD + + + AL + + V+ +DD + S+P
Sbjct: 104 RLDAAALAFCLDHGEAKVFIVDREFARIGREALDKAGVSPL----VIDYDDPEFTGDSAP 159
Query: 63 ----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P+F W P EWD ++LNYTSGTT PKGVV+ HRG ++++ ++I
Sbjct: 160 VGETDYEDFLAAGDPDFDWAMPGDEWDAISLNYTSGTTGDPKGVVYHHRGAALLSLGNVI 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+P V+LWTLPMFH NGW + W ++ V GT++CLR+V P +Y+ + HGVTH+ G
Sbjct: 220 TAGLPQHAVYLWTLPMFHCNGWCFPWTLSIVAGTHVCLRQVRAPAMYAALAEHGVTHLSG 279
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V++ L ++P +PL R V LT+ A PP AVL GF V+H YGLTET G
Sbjct: 280 APIVMSTLLNAPEAQKRPLPRRVHFLTAAAPPPEAVLAAMGEAGFDVTHLYGLTETYGPA 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V AW W+ L+ E+AR KARQGVR L +DV PET S+ DG S GE++FR
Sbjct: 340 VVNAWHEDWDALSRDEQARKKARQGVRYPVLEGLDVRDPETMESLPADGTSLGEVMFRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + + WF +GD+GV H DGY+++KDRSKD+IISGGENISS EVE
Sbjct: 400 VVMRGYLKNPASTEAAFK-GGWFRSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
L+ +PA+ A+VA+ D WG+ PCAF+ LK ++ T E +I +CR RL Y +
Sbjct: 459 DALFKHPAVAAAAVVAKPDAKWGETPCAFIELK--EGREATSEELIAWCRERLAPYKLPR 516
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGK+QKFVLRE
Sbjct: 517 HVVF-GELPKTSTGKVQKFVLRE 538
>gi|126640660|ref|YP_001083644.1| acyl-CoA synthetase [Acinetobacter baumannii ATCC 17978]
Length = 462
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 21 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 78
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 79 GSFEYEEWIAQGDANFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 138
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 139 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 198
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 199 PIVLSMIINLPKEKQPIIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 258
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 259 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 318
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 319 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 377
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 378 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 435
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 436 VVI-TEIPKTSTGKLQKFILRE 456
>gi|163853568|ref|YP_001641611.1| AMP-dependent synthetase and ligase [Methylobacterium extorquens
PA1]
gi|163665173|gb|ABY32540.1| AMP-dependent synthetase and ligase [Methylobacterium extorquens
PA1]
Length = 543
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 274/443 (61%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--VSATSSP 62
RLD ++ L H E+K+ VD + + + AL + + V+ +DD + S+P
Sbjct: 104 RLDAGALAFCLDHGEAKVFIVDREFARIGREALDKAGVSPL----VIDYDDPEFTGDSAP 159
Query: 63 ----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P+F W P EWD ++LNYTSGTT PKGVV+ HRG ++++ ++I
Sbjct: 160 VGETDYEDVLAAGDPDFDWAMPSDEWDAISLNYTSGTTGDPKGVVYHHRGAALLSLGNVI 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+P V+LWTLPMFH NGW + W ++ V GT++CLR+V P +Y+ + HGVTH+ G
Sbjct: 220 TAGLPQHAVYLWTLPMFHCNGWCFPWTLSIVAGTHVCLRQVRAPAMYAALAEHGVTHLSG 279
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V++ L ++P +PL R V LT+ A PP AVL GF V+H YGLTET G
Sbjct: 280 APIVMSTLLNAPEAQKRPLPRRVHFLTAAAPPPEAVLAAMGEAGFDVTHLYGLTETYGPA 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V AW W+ L+ E+AR KARQGVR L +DV PET S+ DG S GE++FR
Sbjct: 340 VVNAWHEDWDALSRDEQARKKARQGVRYPVLEGLDVRDPETMESLPADGTSLGEVMFRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + + WF +GD+GV H DGY+++KDRSKD+IISGGENISS EVE
Sbjct: 400 VVMRGYLKNPASTEAAFK-GGWFRSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
L+ +PA+ A+VA+ D WG+ PCAFV LK ++ T E ++ +CR RL Y +
Sbjct: 459 DALFKHPAVAAAAVVAKPDAKWGETPCAFVELK--EGREATSEELVAWCRERLAPYKLPR 516
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGK+QKFVLRE
Sbjct: 517 HVVF-GELPKTSTGKVQKFVLRE 538
>gi|421496250|ref|ZP_15943486.1| AMP-binding protein [Aeromonas media WS]
gi|407184742|gb|EKE58563.1| AMP-binding protein [Aeromonas media WS]
Length = 540
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/443 (43%), Positives = 274/443 (61%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ + H++S+++ VD + + ALSL S + V+ DD + V
Sbjct: 104 RLDAQSMAFIFQHAQSRVVLVDREFGAVVRKALSLIDSQPL----VIAIDDPTYLEGELV 159
Query: 65 GHPNFK------------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G ++ W+ P EW ++LNYTSGTT +PKGVV+ HRG + +++++
Sbjct: 160 GELTYEAFVATGDEQEPGWL-PADEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAINNVL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P PV+LWTLPMFH NGW + W +AA G ++CLR V IY + H V+H C
Sbjct: 219 SWELPKHPVYLWTLPMFHCNGWCFPWTLAATAGVSVCLRHVQAGAIYEALHEHRVSHFCA 278
Query: 173 ALVVLNMLSSS-PSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML+++ P+ K L P+K +T+GA+PPA V+ E++G V+H YGLTET G
Sbjct: 279 APIVLNMLNNADPALKLGLSHPIKAMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGPC 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V C + W T +RLKARQGV + +M V +P +G V DG++ GEI R
Sbjct: 339 VVCEPQRNWQGQDATALSRLKARQGVASPLQGEMRVANPVSGEPVPRDGKTLGEIFLRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ S M D WF +GD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 399 IVMKGYLKNPAASDEAMADG-WFRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P ++E A++A D+ WG+ PCAFV LK + ++ +I FCR ++ H+ A K
Sbjct: 458 DVLYRHPDVDEAAVIAMPDEKWGEVPCAFVKLK--EGRVLSQAELIAFCREQMAHFKAPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+I LPKT+TGK+QKF+LR+
Sbjct: 516 RIIF-TPLPKTSTGKVQKFMLRQ 537
>gi|421622250|ref|ZP_16063157.1| AMP-binding enzyme [Acinetobacter baumannii OIFC074]
gi|421796234|ref|ZP_16232301.1| AMP-binding enzyme [Acinetobacter baumannii Naval-21]
gi|408696306|gb|EKL41848.1| AMP-binding enzyme [Acinetobacter baumannii OIFC074]
gi|410399749|gb|EKP51933.1| AMP-binding enzyme [Acinetobacter baumannii Naval-21]
Length = 542
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDSEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDANFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LW LP+FH NGW ++W +AA GGTNICLRKVD ++ +I + V + CGA
Sbjct: 219 CGMKPRAVYLWMLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V++PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLNPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|148260199|ref|YP_001234326.1| AMP-dependent synthetase and ligase [Acidiphilium cryptum JF-5]
gi|146401880|gb|ABQ30407.1| AMP-dependent synthetase and ligase [Acidiphilium cryptum JF-5]
Length = 652
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/447 (45%), Positives = 275/447 (61%), Gaps = 21/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E+KLL D + +P+ AAL+ N PV+ DD +
Sbjct: 212 RLDAPTIAYILRHGEAKLLLSDTEFAPVIAAALAELSDNA---PPVIDIDDPEGPGGARL 268
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +F W P+ EW +ALNYTSGTT PKGVV+ HRG ++ + + I
Sbjct: 269 GAMDYEDFLATGTADFDWRFPDDEWSAIALNYTSGTTGKPKGVVYHHRGAYLNGLGNAIT 328
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + PV+LWTLPMFH NGW + W + A+ GT++CLR++D I + ++ HGVTH+CGA
Sbjct: 329 WNMRQHPVYLWTLPMFHCNGWCFPWTITALAGTHVCLRRIDAASIAAAVERHGVTHLCGA 388
Query: 174 LVVLNMLSSSPSTKP---LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
V++NM+ ++P + R V ++T+GA PPAAV+ E LG ++H YGLTET G V
Sbjct: 389 PVIMNMMINAPEPQRAVYAGRGVAMMTAGAPPPAAVIEAMEGLGVDLTHVYGLTETYGPV 448
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAW+ WN ERA L+ARQGV V P T V DG + GE+ R
Sbjct: 449 TYCAWQEDWNGRPAAERAALRARQGVTYAVEEGAMVADPATRAPVPADGTTMGEVFLRGN 508
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M+GYLKD + WF TGD+GV+H DGY+E+KDRSKD+IISGGENIS+ E+E
Sbjct: 509 IVMMGYLKDAAATEKSFA-GGWFATGDLGVMHPDGYIELKDRSKDIIISGGENISTIEIE 567
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+VLY +PA+ E A+VA D+ WG+ PCAFV L+ +++ T E II FCR + H+ A K
Sbjct: 568 TVLYRHPAVMEAAVVAAPDEKWGEVPCAFVVLRPDMTA--TAEEIIAFCRQNMAHFKAPK 625
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
++ ELPKT+TGKIQK+VLRE A
Sbjct: 626 RIVF-SELPKTSTGKIQKYVLRERARA 651
>gi|218532428|ref|YP_002423244.1| AMP-dependent synthetase and ligase [Methylobacterium extorquens
CM4]
gi|218524731|gb|ACK85316.1| AMP-dependent synthetase and ligase [Methylobacterium extorquens
CM4]
Length = 543
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/443 (44%), Positives = 274/443 (61%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--VSATSSP 62
RLD ++ L H E+K+ VD + + + AL + + V+ +DD + S+P
Sbjct: 104 RLDAAALAFCLDHGEAKVFIVDREFARVGREALDKAGVSPL----VIDYDDPEFTGDSAP 159
Query: 63 ----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P+F W P EWD ++LNYTSGTT PKGVV+ HRG ++++ ++I
Sbjct: 160 VGETDYEDFLAAGDPDFDWAMPGDEWDAISLNYTSGTTGDPKGVVYHHRGAALLSLGNVI 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+P V+LWTLPMFH NGW + W ++ V GT++CLR+V P +Y+ + HGVTH+ G
Sbjct: 220 TAGLPQHAVYLWTLPMFHCNGWCFPWTLSIVAGTHVCLRQVRAPAMYAALAEHGVTHLSG 279
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V++ L ++P +PL R V LT+ A PP AVL GF V+H YGLTET G
Sbjct: 280 APIVMSTLLNAPEAQKRPLPRRVHFLTAAAPPPEAVLAAMGEAGFDVTHLYGLTETYGPA 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V AW W+ L+ E+AR KARQGVR L +DV PET S+ DG S GE++FR
Sbjct: 340 VVNAWHEDWDALSRDEQARKKARQGVRYPVLEGLDVRDPETMASLPADGTSLGEVMFRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + + WF +GD+GV H DGY+++KDRSKD+IISGGENISS EVE
Sbjct: 400 VVMRGYLKNPASTEAAFK-GGWFRSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
L+ +PA+ A+VA+ D WG+ PCAFV LK ++ T E ++ +CR RL Y +
Sbjct: 459 DALFKHPAVAAAAVVAKPDAKWGETPCAFVELK--EGREATSEELVAWCRERLAPYKLPR 516
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGK+QKFVLRE
Sbjct: 517 HVVF-GELPKTSTGKVQKFVLRE 538
>gi|316934058|ref|YP_004109040.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
gi|315601772|gb|ADU44307.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
DX-1]
Length = 549
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/449 (44%), Positives = 275/449 (61%), Gaps = 22/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H +K++ VD + + + AL+L PKP++I DD S
Sbjct: 105 RLDSAAIAFQLDHGGAKIILVDPEFAGVVAEALTLMTK----PKPLVIDVDDKMYPGSHR 160
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P F +PE EWD ++L YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGELEYEYAVASGDPTFAGHRPEDEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W +AA G N+CLRKVD I+ +I HGVTH+CG
Sbjct: 221 AGNLGQHPVYLWTLPMFHCNGWCFPWTLAAAAGINVCLRKVDPAKIFELIPKHGVTHMCG 280
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P +PV L +GA+PP AVL E++G ++H YGLTE G
Sbjct: 281 APIVYNALINAPEALKGAAAKPVVGLIAGAAPPMAVLAGAETIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERA+LK RQGV + V+ PET V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDDLPVAERAKLKRRQGVPYPMQEAVTVLDPETMQEVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + + WF+TGD+GV+ +DGY+ IKDRSKD+IISGGEN+SS EVE
Sbjct: 401 IVMKGYLKNEKATKEALA-GGWFHTGDLGVLDADGYVIIKDRSKDIIISGGENVSSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PAI A+VA+ D WG+ PCAFV LK S TE II +CR LP + K
Sbjct: 460 DVLYKHPAILFAAVVAKPDPKWGEVPCAFVELKDGSSA--TEAEIIAYCREHLPGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
S++ +PKT+TGKIQKF+LR+ V +
Sbjct: 518 SIVF-SSIPKTSTGKIQKFMLRDQVKSAK 545
>gi|254473162|ref|ZP_05086560.1| acyl-CoA synthase [Pseudovibrio sp. JE062]
gi|211957883|gb|EEA93085.1| acyl-CoA synthase [Pseudovibrio sp. JE062]
Length = 548
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/447 (43%), Positives = 274/447 (61%), Gaps = 20/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ L H+ESKL+ VD + S + AL L T+ P VL D S+P +
Sbjct: 108 RLDAAIIAFQLDHAESKLVIVDREFSKVMSEALEL---ATVKPTVVLYDDKEFPQSAPVI 164
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +F+W P+ EWD + LNYTSGTT +PKGVV+ HRG +++ +++I
Sbjct: 165 GELEYEELIASGSTDFQWQLPKDEWDAITLNYTSGTTGNPKGVVYHHRGAYLLAQANIIT 224
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ +PV+LWTLPMFH NGW + W ++ V GT++CLR+V I++ + VTH+CGA
Sbjct: 225 AAMGKKPVYLWTLPMFHCNGWCFPWSLSLVAGTHVCLRQVRQGPIWNALADEKVTHLCGA 284
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V++ L ++P + V+ T+ A PP AVL GF V+H YGLTE G V
Sbjct: 285 PIVMSTLLNTPEDQKRKFTHEVEFFTAAAPPPEAVLAAMAEEGFNVTHLYGLTEVYGPAV 344
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
W W+ L +E+ LKARQGV + L D+ V+ P+T V DG++ GE++F+
Sbjct: 345 VNEWHEHWDELPTSEQVALKARQGVNYVALQDLAVLDPKTMQPVPADGETIGEVMFKGNV 404
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + WF++GD+GV H DGY+++KDRSKD+IISGGENISS E+E
Sbjct: 405 VMKGYLKNPSATQEAFA-GGWFHSGDLGVQHEDGYVQLKDRSKDIIISGGENISSIEIEE 463
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P I+ A+VA+ D WG+ PCAFV LK S TE I+ +C+ L + + ++
Sbjct: 464 VLYKHPQISAAAVVARPDDKWGETPCAFVELKENSSV--TETDIVAYCKEHLASFKSPRT 521
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
V+ D LPKT+TGKIQKFVLRE A+
Sbjct: 522 VVFTD-LPKTSTGKIQKFVLREQAKAL 547
>gi|160900471|ref|YP_001566053.1| AMP-dependent synthetase/ligase [Delftia acidovorans SPH-1]
gi|160366055|gb|ABX37668.1| AMP-dependent synthetase and ligase [Delftia acidovorans SPH-1]
Length = 548
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/451 (44%), Positives = 272/451 (60%), Gaps = 24/451 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L VD + + + AL L + P+L+ A P
Sbjct: 102 RLDAETIAFMLDHGEAKVLIVDPEFTGVVAKALKLRQRSA----PLLVIQVEDALYGPAA 157
Query: 65 --------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G F W P EWD +ALNYTSGTT +PKGVV+ HRG I +S+
Sbjct: 158 EQVGSLDYDDFVAGGDAGFDWQLPADEWDAIALNYTSGTTGNPKGVVYHHRGAAINAISN 217
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW + W +AA G N+CLR+V+ I+ I++HGVTH
Sbjct: 218 VLEWDMPKHAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRRVEAQAIFDAIRNHGVTHY 277
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V +L ++P+ P VK + +GA+PPA+++ E LGF ++H YGLTE G
Sbjct: 278 CGAPIVHGLLVNAPAAMKEGVPAGVKAMVAGAAPPASMIEGMEQLGFDITHVYGLTEVYG 337
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA + W+ L ERARL +RQGVR V+ PET V HDGQ+ GEI+F+
Sbjct: 338 PATVCAKHAAWDALDIGERARLNSRQGVRYHLQRSASVLDPETMEPVPHDGQTMGEIMFQ 397
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ + + R WF+TGD+ V H DGY++IKDRSKD+IISGGENISS E
Sbjct: 398 GNIAMKGYLKNPQATDEAFR-GGWFHTGDLAVQHPDGYIQIKDRSKDIIISGGENISSIE 456
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +PA+ A+VA+ D WG+ PCAF+ LK + T E I+ C+ L Y
Sbjct: 457 VEDVLYRHPAVLAAAVVAKPDPKWGETPCAFIELK--AGAQTTAEDIVAHCKKHLAGYKV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
++V+ ELPKT+TGKIQKF LR +V
Sbjct: 515 PRAVVF-GELPKTSTGKIQKFELRRQAGSVQ 544
>gi|262374305|ref|ZP_06067581.1| dicarboxylate-CoA ligase PimA [Acinetobacter junii SH205]
gi|262310863|gb|EEY91951.1| dicarboxylate-CoA ligase PimA [Acinetobacter junii SH205]
Length = 547
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 281/442 (63%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+ES++L VD + LA AL+L + I+ + + D+ +
Sbjct: 101 RLDAKTIAFMLTHAESRVLLVDPEFKTLAEEALTLINQDIIV---IDVFDEEYDAEQIAL 157
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F+W+ P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 158 GQYEYESWLAQGDPEFEWLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 217
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLR+VD +I+ I H V + CGA
Sbjct: 218 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRRVDSALIFKYISEHKVDYFCGA 277
Query: 174 LVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+ML ++P+ + D V+++ +GA+PP A++ ++G V+H YGLTET G
Sbjct: 278 PIVLSMLINAPTDQRTSFDHHVEVMVAGAAPPVAIIEGMRNIGINVNHVYGLTETYGPSA 337
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ E+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 338 LCAAQAGWSDLSIQEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 397
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 398 VMKGYLKNPQATEEAFK-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 456
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D W + PCAF+ LK +S + E II C+ L + K
Sbjct: 457 VLYRHPAVLTAAVVAKPDPRWQEVPCAFIELKQGISA--SAEDIILHCQKELARFKVPKD 514
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 515 VVI-TEIPKTSTGKLQKFILRE 535
>gi|333913231|ref|YP_004486963.1| o-succinylbenzoate--CoA ligase [Delftia sp. Cs1-4]
gi|333743431|gb|AEF88608.1| o-succinylbenzoate--CoA ligase [Delftia sp. Cs1-4]
Length = 548
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/451 (44%), Positives = 272/451 (60%), Gaps = 24/451 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L VD + + + AL L + P+L+ A P
Sbjct: 102 RLDAETIAFMLDHGEAKVLIVDPEFTGVVAKALKLRQRSA----PLLVIQVEDALYGPAA 157
Query: 65 --------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G F W P EWD +ALNYTSGTT +PKGVV+ HRG I +S+
Sbjct: 158 EQVGSLDYDDFVAGGDAGFDWQLPADEWDAIALNYTSGTTGNPKGVVYHHRGAAINAISN 217
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW + W +AA G N+CLR+V+ I+ I++HGVTH
Sbjct: 218 VLEWDMPKHAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRRVEAQAIFDAIRNHGVTHY 277
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V +L ++P+ P VK + +GA+PPA+++ E LGF ++H YGLTE G
Sbjct: 278 CGAPIVHGLLVNAPAAMKEGVPAGVKAMVAGAAPPASMIEGMEQLGFDITHVYGLTEVYG 337
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA + W+ L ERARL +RQGVR V+ PET V HDGQ+ GEI+F+
Sbjct: 338 PATVCAKHAAWDALDIGERARLNSRQGVRYHLQRSASVLDPETMEPVPHDGQTMGEIMFQ 397
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ + + R WF+TGD+ V H DGY++IKDRSKD+IISGGENISS E
Sbjct: 398 GNIAMKGYLKNPQATDEAFR-GGWFHTGDLAVQHPDGYIQIKDRSKDIIISGGENISSIE 456
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +PA+ A+VA+ D WG+ PCAF+ LK + T E I+ C+ L Y
Sbjct: 457 VEDVLYRHPAVLAAAVVAKPDPKWGETPCAFIELK--AGAQTTAEDIVAHCKKHLAGYKV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
++V+ ELPKT+TGKIQKF LR +V
Sbjct: 515 PRAVVF-GELPKTSTGKIQKFELRRQAGSVQ 544
>gi|264677333|ref|YP_003277239.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
gi|262207845|gb|ACY31943.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni CNB-2]
Length = 548
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/442 (45%), Positives = 273/442 (61%), Gaps = 18/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E++ L VD + +PL AL L S T+ + + D V ++ +
Sbjct: 102 RLDAETLAFMLDHGEARALIVDPEFAPLMARALKLRQS-TVPIYVIQVEDPVYGEAAEQI 160
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G F W P EWD +ALNYTSGTT +PKGVV+ HRG +S++++
Sbjct: 161 GAIDYESFVAQGDAGFDWQLPGDEWDAIALNYTSGTTGNPKGVVYHHRGAHNNAISNVLE 220
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P V+LWTLPMFH NGW + W +AA NICLR+VD I+ I++HGV+H CGA
Sbjct: 221 WDMPKHAVYLWTLPMFHCNGWCFPWTVAARAAVNICLRRVDAQAIFDAIRNHGVSHYCGA 280
Query: 174 LVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V ++L ++P+ P VK + +GA+PPA+++ E++GF ++H YGLTET G
Sbjct: 281 PIVHSLLVNAPAAMKQGVPAGVKAMVAGAAPPASMIEGMEAMGFDITHVYGLTETYGPAT 340
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA WN L ERARL +RQGVR V+ PET V DGQ+ GEI+F+
Sbjct: 341 VCAKHESWNALDIGERARLNSRQGVRYHLQRSAAVLDPETMQPVPRDGQTMGEIMFQGNI 400
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
M GYLK+ + + R WF++GD+ V H DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 401 AMKGYLKNPQATQEAFR-GGWFHSGDLAVQHPDGYIQIKDRSKDIIISGGENISSIEVED 459
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D WG+ PCAF+ LK + T E II C+ L Y ++
Sbjct: 460 VLYRHPAVLAAAVVAKPDPKWGETPCAFIELK--AGAETTAEDIIAHCKKHLAGYKVPRA 517
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGKIQKF LR+
Sbjct: 518 VVF-GELPKTSTGKIQKFELRK 538
>gi|365891345|ref|ZP_09429777.1| putative AMP-binding enzyme [Bradyrhizobium sp. STM 3809]
gi|365332722|emb|CCE02308.1| putative AMP-binding enzyme [Bradyrhizobium sp. STM 3809]
Length = 547
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/447 (44%), Positives = 278/447 (62%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H ++K++ VD + S + AL L PKP +I DD S +
Sbjct: 103 RLDASSIAFQLDHGQAKIILVDPEFSGVISEALKLMSG----PKPFVIDVDDASYSGGSR 158
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P+F+ +P EWD +A++YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 159 IGEIEYEAVVAAGDPSFEPRRPADEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W MAA G N+CLRKV+ I+ +IK HGVTH+CG
Sbjct: 219 AGGLGQHPVYLWTLPMFHCNGWCFPWTMAAAAGVNVCLRKVEPTKIFELIKTHGVTHMCG 278
Query: 173 ALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N+L ++P ++PV L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 279 APIVYNVLINAPDAPKGKREKPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERARLK RQGV + V++PET V DG++ GE++FR
Sbjct: 339 SVCAEQPGWDDLPAPERARLKRRQGVPYPLQEAVTVLNPETMQEVPRDGETIGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 399 IVMKGYLKNEKATQDAFA-GGWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAFV LK + TE II +CR+ + + K
Sbjct: 458 DILYKHPAVLFAAVVAKPDPKWGEVPCAFVELK--DGAQATEAEIIAYCRSHMSGFKTPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
V++ +PKT+TGKIQKF+LR VN+
Sbjct: 516 -VVVFGPIPKTSTGKIQKFLLRNEVNS 541
>gi|389694232|ref|ZP_10182326.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Microvirga
sp. WSM3557]
gi|388587618|gb|EIM27911.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Microvirga
sp. WSM3557]
Length = 546
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 275/448 (61%), Gaps = 24/448 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD K ++ L HSE+K+L D + S AAL+ +++ KP++I D + P
Sbjct: 103 RLDAKIIAFSLDHSEAKVLITDREFSATVKAALA---RSSV--KPLVIDYDDPEFTGPGE 157
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P F W P EWD + LNYTSGTT PKGVV+ HRG +++ + ++
Sbjct: 158 RLGAMEYEEFLAEGDPEFAWNPPRDEWDAITLNYTSGTTGDPKGVVYHHRGAYLLAMGNI 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ + PV+LWTLPMFH NGW + W ++ V G ++CLR V +Y + VTH+C
Sbjct: 218 LTAGMGQHPVYLWTLPMFHCNGWCFPWSLSIVAGIHVCLRAVRAKPMYDALADQRVTHLC 277
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V++ L ++P++ +PL VK LT+ A PP AVL ++ GF V+H YGLTE G
Sbjct: 278 GAPIVMSTLLNAPASEKRPLPHTVKFLTAAAPPPEAVLAAMKAAGFDVTHLYGLTEVYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V W +W+ L A KARQGVR L +DV+ PET V DG++ GE++FR
Sbjct: 338 AVVNEWHDEWDALDQGGYAAKKARQGVRYPVLEALDVLDPETMQPVPADGRTLGEVMFRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ G++ + WF++GD+GV + DGY+++KDRSKD+IISGGENISS EV
Sbjct: 398 NVVMKGYLKNPSGTAKAF-EGGWFHSGDLGVKYPDGYVQLKDRSKDIIISGGENISSIEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PAI A+VA D+ WG+ PCAFV L+ + S P E+ II +CR L Y
Sbjct: 457 EDALYRHPAIQAAAVVAMPDEKWGETPCAFVELRPDQS-VPAED-IIAWCRQHLASYKCP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNA 437
++VI ELPKT+TGKIQKF LRE+ A
Sbjct: 515 RTVIFT-ELPKTSTGKIQKFQLREMARA 541
>gi|39935847|ref|NP_948123.1| acyl-CoA synthetase [Rhodopseudomonas palustris CGA009]
gi|39649701|emb|CAE28222.1| possible AMP-binding enzyme [Rhodopseudomonas palustris CGA009]
Length = 549
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/449 (44%), Positives = 275/449 (61%), Gaps = 22/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H +K++ VD + S + AL L PKP++I DD S
Sbjct: 105 RLDAAAIAFQLDHGGAKIILVDPEFSSVVAEALKLMTK----PKPLVIDVDDKMYPGSHR 160
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P F +PE EWD ++L YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGELEYEYAVASGDPTFAGHRPEDEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLP+FH NGW + W +AA G N+CLRKVD I+ +I HGVTH+CG
Sbjct: 221 AGNLGQHPVYLWTLPIFHCNGWCFPWTLAAAAGINVCLRKVDPAKIFELIPKHGVTHMCG 280
Query: 173 ALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P +PV L +GA+PP AVL E++G ++H YGLTE G
Sbjct: 281 APIVYNALINAPEAPKGVPTKPVVGLIAGAAPPMAVLAGAETIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERA+LK RQGV + V++PET V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDELPVAERAKLKRRQGVPYPMQEAVTVLNPETMQEVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + + WF+TGD+GV+ +DGY+ IKDRSKD+IISGGEN+SS EVE
Sbjct: 401 IVMKGYLKNEKATKEALA-GGWFHTGDLGVLDADGYVIIKDRSKDIIISGGENVSSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PAI A+VA+ D WG+ PCAFV LK S TE II +CR LP + K
Sbjct: 460 DVLYKHPAILFAAVVAKPDPKWGEVPCAFVELKDGASA--TEAEIIAYCREHLPGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
S++ +PKT+TGKIQKF+LR+ V +
Sbjct: 518 SIVF-SSIPKTSTGKIQKFMLRDQVKSAK 545
>gi|254455838|ref|ZP_05069267.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082840|gb|EDZ60266.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Candidatus
Pelagibacter sp. HTCC7211]
Length = 538
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 190/444 (42%), Positives = 276/444 (62%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD ++ +L HSE+K+L VD Q AL + I+ + I+D
Sbjct: 101 RLDANTIAYILEHSEAKVLVVDRQLHVEVKKALKILDKKIIV---IDINDKHADQSKLEK 157
Query: 55 --DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D+ S G N+ + P+ EW ++L+YTSGTT +PKGVV+ HRG ++++ S +
Sbjct: 158 IGDLEYESFLNTGDENYLYKMPDDEWQAISLSYTSGTTGNPKGVVYHHRGSYLMSTGSAV 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +PN+ FL +PMFH NGW Y W +A + G ICLR +DV I+ +I + VTH G
Sbjct: 218 AWNMPNRLNFLTIVPMFHCNGWCYPWTIAMLNGRTICLRNIDVKKIFELIDKYNVTHFGG 277
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNM++ +P + K L + V +LT+GA PP+ + + + LGF V H YGLTET G V
Sbjct: 278 APIVLNMITGAPESDRKKLKQKVHVLTAGAPPPSIIFKKMKDLGFEVMHVYGLTETYGHV 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAW +WN + ++ +KARQGVR + V+ PET V DG++ GEI+ R
Sbjct: 338 TQCAWNEEWNAYDEDKQNEIKARQGVRYPNTEGVTVMDPETMKEVPSDGKTIGEIMIRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GY KD+E + M WF++GD+ V+H DGY++I+DRSKD+IISGGENISS E+E
Sbjct: 398 VVMKGYFKDKEATDKAMA-GGWFHSGDLAVMHPDGYVKIQDRSKDIIISGGENISSIEIE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP-TEEAIIEFCRARLPHYMAH 409
+ L +P+++ A+VA+ D+ WG+ PCAF+ + ++ KP TE+ +I+FC+ L +
Sbjct: 457 NTLSKHPSVSIAAVVAKPDEKWGEVPCAFIEM---VTDKPTTEKELIDFCKETLAGFKVP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K VI ELPKT+TGKIQKF LR+
Sbjct: 514 KQVIF-CELPKTSTGKIQKFELRK 536
>gi|293610404|ref|ZP_06692705.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427424227|ref|ZP_18914361.1| AMP-binding enzyme [Acinetobacter baumannii WC-136]
gi|292827636|gb|EFF86000.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425698967|gb|EKU68589.1| AMP-binding enzyme [Acinetobacter baumannii WC-136]
Length = 545
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/446 (45%), Positives = 276/446 (61%), Gaps = 27/446 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD K ++ +L H+ESK+L VD + LA ALSL P+ I V+I DV+ T
Sbjct: 101 RLDAKTIAFMLEHAESKVLLVDPEFVNLAREALSLIPNQHI----VVI--DVADTEYEGE 154
Query: 63 -------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
G NF W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S
Sbjct: 155 NQFLGSFEYEEWIAQGDINFSWHLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAAS 214
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+++ + + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V +
Sbjct: 215 NILACGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAAHKVDY 274
Query: 170 ICGALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
CGA +VL+M+ + P K V+++ +GA+PP A++ ++G V+H YGLTET
Sbjct: 275 FCGAPIVLSMILNLPKEKQTSFAHHVEVMVAGAAPPVAIIEGMRNMGINVNHVYGLTETY 334
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G CA +S WN L+ E+A+L +RQGV M V+ PET V +DGQ+ GEI+F
Sbjct: 335 GPSALCASQSGWNELSIAEQAQLHSRQGVPYPLQDSMRVLDPETMEPVPNDGQTMGEIMF 394
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R +M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS
Sbjct: 395 RGNIVMKGYLKNPKATQEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSL 453
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE VLY +PA+ A+VA+ D W + PCAF+ LK + T E II C+ L +
Sbjct: 454 EVEDVLYKHPAVLTAAVVAKPDARWQEVPCAFIELK--MGATATPEEIIAHCQKELARFK 511
Query: 408 AHKSVIIEDELPKTATGKIQKFVLRE 433
K V+I E+PKT+TGK+QKF+LRE
Sbjct: 512 VPKDVVI-TEIPKTSTGKLQKFILRE 536
>gi|356495772|ref|XP_003516747.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Glycine max]
Length = 555
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/450 (43%), Positives = 281/450 (62%), Gaps = 20/450 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI-----LPKPVLI------- 52
R D + VS LL +E+KL+FV YQ +A AAL + T LP VLI
Sbjct: 99 RHDSEMVSTLLKQTEAKLVFVYYQLLDIAQAALEILSKTTTTTTTKLPLLVLISECGHPS 158
Query: 53 --HDDVSATSSPTV--GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
H + T + G F+ +P+ E DP+ ++ TSGTT++PK V++ HRG+++ +
Sbjct: 159 PPHAKGTLTYEDLIAKGTLEFEVRRPKDELDPITISSTSGTTANPKSVIYSHRGVYLNAL 218
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
S+I + + PV+LW +PMFH NGW W +AA GGTN+CL V I+ I H VT
Sbjct: 219 VSIILNEMRSMPVYLWCVPMFHCNGWCIPWSIAAQGGTNVCLSSVTAEAIFDNIFRHKVT 278
Query: 169 HICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
H+ GA +LNM+ +SP KPL V ++T GA PP V+ + E+LGF V+H+YG TE G
Sbjct: 279 HMGGAPTILNMIINSPLRKPLSGKVAVMTGGAPPPPDVIFKMENLGFNVTHAYGSTEAYG 338
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
AWK +W+ +A+LK RQGVR +G+ D+DV P T SV D ++ GE++FR
Sbjct: 339 PAAINAWKPEWDNQPRDAKAKLKTRQGVRHVGMEDLDVKDPHTMKSVPADAKTIGEVMFR 398
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M GYLK+ + + + WF +GD+GV H DGY+E++DRSKD II GGE++SS E
Sbjct: 399 GNTVMCGYLKNLKATQEAFK-GGWFRSGDMGVKHPDGYIELRDRSKDTIICGGESVSSIE 457
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
+E+V++ +PA+ E ++V + D +WG+ PCAFV LK S T + II FC+ RLP +MA
Sbjct: 458 LEAVIFSHPAVFEASVVGRPDDYWGETPCAFVKLKEGCSA--TADEIILFCQNRLPPFMA 515
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAV 438
++V+ D LPKT+TGK QKF+LRE A+
Sbjct: 516 PRTVLFAD-LPKTSTGKTQKFLLREKAKAM 544
>gi|83592993|ref|YP_426745.1| acyl-CoA synthetase [Rhodospirillum rubrum ATCC 11170]
gi|386349724|ref|YP_006047972.1| acyl-CoA synthetase [Rhodospirillum rubrum F11]
gi|83575907|gb|ABC22458.1| AMP-dependent synthetase and ligase [Rhodospirillum rubrum ATCC
11170]
gi|346718160|gb|AEO48175.1| acyl-CoA synthetase [Rhodospirillum rubrum F11]
Length = 542
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/449 (44%), Positives = 273/449 (60%), Gaps = 26/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT-SSPT 63
RL+ + ++ +L H E+++L D + SP+ AL+ + +P+ + D V P
Sbjct: 102 RLNAEEIAFILEHGEARVLLTDTEFSPIIADALAR------IDRPITVIDIVDPEYDGPG 155
Query: 64 V-------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G P W P EW+ + LNYTSGTT +PKGVV+ HRG ++ +S+
Sbjct: 156 ACVGEMEYEAFLAEGDPTADWRWPADEWESITLNYTSGTTGNPKGVVYHHRGAYLNALSN 215
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+I W +P+ V+LWTLPMFH NGW + W MAA GTN+CLR+V I+ I V+H
Sbjct: 216 IITWGMPHHAVYLWTLPMFHCNGWCFPWTMAANAGTNVCLRRVTAAGIFQAIAEEKVSHF 275
Query: 171 CGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +VL+ L + + D V ++T+ A PPA+VL + + GF V+H YGLTET G
Sbjct: 276 CGAPIVLSFLINARPEERRSFDHQVNVMTAAAPPPASVLEKMQREGFCVTHVYGLTETYG 335
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CAWK WN L E+ARLK+RQGVR + + V PET +V DG+S GE+ FR
Sbjct: 336 PATVCAWKEPWNDLPMDEQARLKSRQGVRYLVQEGLMVGDPETMEAVPADGESMGEVFFR 395
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ E ++ R WF+TGD+GV+H DGYL++KDRSKD+IISGGENISS E
Sbjct: 396 GNITMKGYLKNPEATAEAFR-GGWFHTGDLGVLHPDGYLQLKDRSKDIIISGGENISSIE 454
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VL+ +P + A+VA+ D+ WG+ P A+V L+ TE+ ++ FCR L HY
Sbjct: 455 VEGVLHRHPDVVAAAVVAKPDEKWGETPKAYVELR--DGATVTEDELVAFCRLHLAHYKC 512
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNA 437
+ V + LPKT+TGKIQKFVLR V A
Sbjct: 513 PRDVEV-GPLPKTSTGKIQKFVLRRQVRA 540
>gi|410091589|ref|ZP_11288146.1| acyl-CoA synthetase [Pseudomonas viridiflava UASWS0038]
gi|409761130|gb|EKN46229.1| acyl-CoA synthetase [Pseudomonas viridiflava UASWS0038]
Length = 553
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/443 (45%), Positives = 277/443 (62%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--------- 55
RLD ++ +L H E+K+L D + + AAL++ P+LI D
Sbjct: 101 RLDASAIAFMLGHGEAKVLIADREFHVVVHAALAMLEH-----PPLLIDVDDPEYGEGRA 155
Query: 56 ---VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ + VG P F+W PE EW P++LNYTSGTT PKGVV+ HRG F+ + + +
Sbjct: 156 LSELDYEALLAVGDPEFEWQWPEDEWAPISLNYTSGTTGDPKGVVYHHRGAFLNAIGNQM 215
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + PV+LWTLPMFH NGW Y W + A GT++ LR+VD I ++I H V+H+CG
Sbjct: 216 AWGMGLHPVYLWTLPMFHCNGWCYPWTITAQAGTHVFLRRVDPQKIITLISEHKVSHLCG 275
Query: 173 ALVVLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN L++ P+ + V +T+GA+PPA V+ E++G ++H+YGLTET G V
Sbjct: 276 APIVLNALANLPNAAAVSFGHGVNAMTAGAAPPARVIASVEAMGICITHAYGLTETYGPV 335
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAWK++W+ L E A LKARQGVR L D+ V P T V DGQ+ GEI R
Sbjct: 336 TVCAWKAEWDELPPDECASLKARQGVRYPTLEDVMVADPHTHQPVPKDGQTIGEIYMRGN 395
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYL + + + WF++GD+ V H+DGYLEI+DRSKD+IISGGENIS+ EVE
Sbjct: 396 TVMKGYLGNPAATDKAF-EGGWFHSGDLAVWHADGYLEIRDRSKDIIISGGENISTIEVE 454
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ E A+VA+ D+ WG+ PCAFV+LK + T E I+ FCR L + K
Sbjct: 455 GVLYRHPAVLEAAVVARPDEKWGETPCAFVTLKTGCDQV-TGEQIMRFCREHLAGFKVPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+V+ LPKT+TGKIQKF+LR+
Sbjct: 514 TVVFT-PLPKTSTGKIQKFLLRD 535
>gi|375262558|ref|YP_005024788.1| acyl-CoA synthetase [Vibrio sp. EJY3]
gi|369842986|gb|AEX23814.1| acyl-CoA synthetase [Vibrio sp. EJY3]
Length = 539
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/444 (41%), Positives = 280/444 (63%), Gaps = 25/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L HSE+K+L D + + AL T++ P LI D
Sbjct: 101 RLDAETIAFMLKHSEAKVLVCDREFHAVITEAL------TLIDNPPLIIDVNDPEYGGEE 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G PN++W PE EW ++LNYTSGTT +PKGVV+ HRG ++ ++ +
Sbjct: 155 ATSDLDYEAFLAEGDPNYEWQWPEDEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + + PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD + ++I+ H V+H+C
Sbjct: 215 MTWSMGHHPVYLWTLPMFHCNGWCYPWTITALAGVHVFLRRVDPQKVLTLIREHKVSHLC 274
Query: 172 GALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P + +D PV + +GA+PPA V+ E +G ++H YGLTE G
Sbjct: 275 GAPIVLNALVNMPEEAKAAIDHPVNAMVAGAAPPAKVIGDVEKMGINITHVYGLTEVYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW W+ + ERA LK+RQGVR L + V +T V DG++ GE+ R
Sbjct: 335 VTVCAWHESWDEFSLEERATLKSRQGVRYPTLEGVMVADTQTLKPVAKDGKTIGEVFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ ++ + WF+TGD+GV H +GY+EIKDR KD+IISGGENIS+ E+
Sbjct: 395 NTVMKGYLKNPSATAEAF-EGGWFHTGDLGVCHPNGYIEIKDRLKDIIISGGENISTIEL 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +P I EV++VA+ D+ WG+ PCAF++LK ++ +E I+++CR L +
Sbjct: 454 EDVLYKHPDILEVSVVAKPDERWGESPCAFITLK--QNRFTSENEILDYCREHLAGFKIP 511
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K+++ + LPKT+TGK+QK++LR+
Sbjct: 512 KTIVFTN-LPKTSTGKVQKYILRD 534
>gi|402758531|ref|ZP_10860787.1| acyl-CoA synthetase [Acinetobacter sp. NCTC 7422]
Length = 547
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 191/439 (43%), Positives = 278/439 (63%), Gaps = 14/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--------V 56
RLD K ++ +L H+E+K+L VD + +A L+L P + I+ D
Sbjct: 101 RLDAKSIAFMLEHAEAKVLLVDPEFRQVAAEVLTLIPQDIIVIDVFDAEFDGEQIALGQY 160
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
S G P F+W+ P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++ +
Sbjct: 161 EYESWLAQGDPEFEWLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILACGM 220
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+ +LWTLP+FH NGW ++W +AA GGTNICLR+VD +I+ I H V + CGA +V
Sbjct: 221 KPRATYLWTLPLFHCNGWCFAWSIAASGGTNICLRRVDPTLIFKYIAAHKVDYFCGAPIV 280
Query: 177 LNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
L+ML ++P+ + + V+++ +GA+PP A++ ++G V+H YGLTET G CA
Sbjct: 281 LSMLINTPNEQRTAFEHHVEVMVAGAAPPVAIIEGMHNIGINVNHVYGLTETYGPSALCA 340
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
++ W+ L+ E+A+L +RQGV M V+ PET V +DGQ+ GEI+FR +M
Sbjct: 341 SQAGWSDLSIQEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGQTMGEIMFRGNIVMK 400
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ + ++ + WF+TGD+ V H+DGY +I DRSKD+IISGGENISS EVE VLY
Sbjct: 401 GYLKNPQATAEAFK-GGWFHTGDLAVSHADGYAKITDRSKDIIISGGENISSLEVEDVLY 459
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ A+VA+ D W + PCAF+ LK S + E +I C+ L + K V+I
Sbjct: 460 RHPAVLTAAVVAKPDARWQEVPCAFIELKQGTSA--SAEELIAHCQQELARFKVPKDVVI 517
Query: 415 EDELPKTATGKIQKFVLRE 433
E+PKTATGK+QKF+LRE
Sbjct: 518 -TEIPKTATGKLQKFILRE 535
>gi|92117535|ref|YP_577264.1| acyl-CoA synthetase [Nitrobacter hamburgensis X14]
gi|91800429|gb|ABE62804.1| AMP-dependent synthetase and ligase [Nitrobacter hamburgensis X14]
Length = 547
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 275/447 (61%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS---- 60
RL+ ++ +L H +K++ VD + S + AL+L PKP +I D +A S
Sbjct: 103 RLEAASLAFMLDHGGAKVILVDPEFSGVIAEALALM----TCPKPFVIDVDDAAFSGGER 158
Query: 61 --------SPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ G P F V P+ EWD +AL+YTSGTT +PKGVV HRG ++ +S+++
Sbjct: 159 IGAIEYEAAVAAGDPGFVAVFPQDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAISNVL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ P +LWTLPMFH NGW + W +AA G N+CLRKVD I+ +I+ HGVTH+CG
Sbjct: 219 AGGLGQHPSYLWTLPMFHCNGWCFPWAIAATAGVNVCLRKVDPVRIFELIQKHGVTHMCG 278
Query: 173 ALVVLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P + RP+ L +GA+PP AVL ES+G ++H YGLTET G
Sbjct: 279 APIVYNTLINAPGAPKGNAARPIVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTETYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W L +RA+LK RQGV + V+ PET V DG++ GE++FR
Sbjct: 339 SVCAEQPGWGALPADQRAQLKRRQGVCYPLQEAITVLDPETMREVPRDGETIGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK++ ++ WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 399 IVMKGYLKNETATNEAFA-GGWFHTGDLGVLDEQGYVIIKDRSKDIIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAFV LK + TE II CR R+P + K
Sbjct: 458 DILYKHPAVLLAAVVAKPDAKWGEVPCAFVELK--DGARATEAEIIAHCRERMPGFKTPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
+V+ +PKT+TGKIQKF+LR VN+
Sbjct: 516 AVVF-GTIPKTSTGKIQKFLLRNQVNS 541
>gi|260551944|ref|ZP_05825806.1| acyl-CoA synthetase/AMP-acid ligase II [Acinetobacter sp. RUH2624]
gi|260405347|gb|EEW98842.1| acyl-CoA synthetase/AMP-acid ligase II [Acinetobacter sp. RUH2624]
Length = 542
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 195/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W+ P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWIAQGDANFEWLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKQKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK + P E II C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGATVTPEE--IIAHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|406038015|ref|ZP_11045379.1| acyl-CoA synthetase [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 548
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/442 (43%), Positives = 280/442 (63%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+ESK+L VD + LA AL+L + I+ + + D +
Sbjct: 101 RLDAKTIAFMLAHAESKVLLVDPEFRSLAEEALTLISQDIIV---IDVFDQEYEGEQIAL 157
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +P F+W+ P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 158 GQYEYESWLAKGNPEFEWLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 217
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLR+VD +I+ I H V + CGA
Sbjct: 218 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRRVDPVLIFKYIAEHKVDYFCGA 277
Query: 174 LVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+ML ++P+ + + V+++ +GA+PP A++ +G V+H YGLTET G
Sbjct: 278 PIVLSMLINTPAEQKTAFNHHVEVMVAGAAPPVAIIEGMRHIGINVNHVYGLTETYGPSA 337
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ E+A+L +RQGV M V+ PET V +DGQ+ GEI+FR
Sbjct: 338 LCASQAGWSDLSIQEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGQTMGEIMFRGNI 397
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 398 VMKGYLKNPQATEEAFK-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 456
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S + E II C+ L + K
Sbjct: 457 VLYRHPAVLTAAVVAKPDERWQEVPCAFIELKQGASA--SAEEIIAHCQKELARFKVPKD 514
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 515 VVI-TEIPKTSTGKLQKFILRE 535
>gi|367476745|ref|ZP_09476120.1| putative AMP-binding enzyme [Bradyrhizobium sp. ORS 285]
gi|365270941|emb|CCD88588.1| putative AMP-binding enzyme [Bradyrhizobium sp. ORS 285]
Length = 547
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/447 (44%), Positives = 277/447 (61%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H +++++ VD + S + AL L PKP +I DD S T
Sbjct: 103 RLDAPSIAFQLDHGQARIILVDPEFSGVISEALRLMSG----PKPFVIDVDDASYTGGSR 158
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P F+ +P EWD +A++YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 159 IGEIEYEAAVAAGDPAFEPRRPADEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W MAA G N+CLRKV+ I+ +IK HGVTH+CG
Sbjct: 219 AGGLGQHPVYLWTLPMFHCNGWCFPWTMAAAAGVNVCLRKVEPTKIFELIKAHGVTHMCG 278
Query: 173 ALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N+L ++P ++PV L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 279 APIVYNVLINAPDAPKGRREKPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERARLK RQGV + V++PET V DG++ GE++FR
Sbjct: 339 SVCAEQPGWDDLPAPERARLKRRQGVPYPLQEAVTVLNPETMQEVPRDGETIGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 399 IVMKGYLKNEKATQDAFA-GGWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAFV LK + TE II +CR+ + + K
Sbjct: 458 DILYKHPAVLFAAVVAKPDPKWGEVPCAFVELK--DGAQATEAEIIAYCRSHMSGFKTPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
V++ +PKT+TGKIQKF+LR VN+
Sbjct: 516 -VVVFGPIPKTSTGKIQKFLLRNEVNS 541
>gi|171060260|ref|YP_001792609.1| AMP-dependent synthetase and ligase [Leptothrix cholodnii SP-6]
gi|170777705|gb|ACB35844.1| AMP-dependent synthetase and ligase [Leptothrix cholodnii SP-6]
Length = 547
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/442 (43%), Positives = 276/442 (62%), Gaps = 22/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ +L H E+K+L D + + + AL+L + +P++I +D A +
Sbjct: 104 RLDAEAIAFMLQHGEAKVLLTDREFAGVIEPALALLGEH----RPLVIEVEDELAPAGKA 159
Query: 64 VGHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G ++ W P+ EWD +ALNYTSGTT +PKGVV HRG ++ S++I
Sbjct: 160 LGEIGYEAFLAGGDAAQAWTLPDDEWDAIALNYTSGTTGNPKGVVTHHRGAYLNAASNVI 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P P +LWTLPMFH NGW + W MA V GT++CLR+VD +IY++I+ H VTH+CG
Sbjct: 220 GWSLPQHPTYLWTLPMFHCNGWCFPWTMALVAGTSVCLRRVDPALIYTLIRAHRVTHLCG 279
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V +ML +P+ + + V L +GA+PPAAV+ E+ G ++H YGLTE G
Sbjct: 280 APIVYSMLIHAPAALREGITHTVNGLIAGAAPPAAVIEGCEAAGINLTHVYGLTEVYGPA 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERA L +RQGV + V+ P T V DG + GEI FR
Sbjct: 340 AVCAKQESWDALPLAERAMLNSRQGVPYPLQQAVAVLDPATMQPVPADGVTMGEIFFRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + ++ WF+TGD+ V+H DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 400 VVMKGYLKNPDATAEAFA-GGWFHTGDLAVLHPDGYVKIKDRSKDIIISGGENISSLEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
L+ +PA+ A+VAQ D WG+ PCAF+ LK + + +E +I+FCR+ L + K
Sbjct: 459 DTLHRHPAVMLAAVVAQPDAKWGEVPCAFIELKPGM--QVSEAELIDFCRSHLARFKVPK 516
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
++ ELPKT+TGK+QKFVLR
Sbjct: 517 RIVF-SELPKTSTGKLQKFVLR 537
>gi|319762045|ref|YP_004125982.1| AMP-dependent synthetase/ligase [Alicycliphilus denitrificans BC]
gi|317116606|gb|ADU99094.1| AMP-dependent synthetase and ligase [Alicycliphilus denitrificans
BC]
Length = 548
Score = 370 bits (949), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 269/445 (60%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVL---IHDDVSATSS 61
RLD + ++ +L H E++ + VD + +P+ AL+L S P+L + D V ++
Sbjct: 102 RLDPETIAFMLDHGEARAVIVDPEFAPVMARALALRQSKA----PLLLIDVEDAVYGAAA 157
Query: 62 P-----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G P F W P EWD +ALNYTSGTT +PKGVV+ HRG I +S+
Sbjct: 158 ERLGTQTYEEFLAAGDPQFAWELPGDEWDAIALNYTSGTTGNPKGVVYHHRGAAINAISN 217
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW + W +AA G N+CLR+V+ I+ ++ HGVTH
Sbjct: 218 VLEWDMPKHSVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRRVEAQAIFDAMRSHGVTHY 277
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V +L ++P+ P VK + +GA+PPA+++ E LGF ++H YGLTE G
Sbjct: 278 CGAPIVHGLLVNAPAAMKEGVPAGVKAMVAGAAPPASMIEGMEKLGFDLTHVYGLTEVYG 337
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA WN L ERARL ARQGVR V+ PET V DG++ GEI+FR
Sbjct: 338 PATVCARHDAWNALDVGERARLNARQGVRYHLQRAAAVLDPETMQPVPRDGETMGEIMFR 397
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ + R WF++GD+ V + DGY++IKDRSKD+IISGGENISS E
Sbjct: 398 GNIAMKGYLKNPAATGDAFR-GGWFHSGDLAVQYLDGYIKIKDRSKDIIISGGENISSIE 456
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +P + A+VA+ D WG+ PCAFV LK + T E I+ C+ L +
Sbjct: 457 VEDVLYRHPDVLAAAVVAKPDPKWGETPCAFVELK--AGAQATPEDIVAHCKKHLAGFKV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++++ ELPKT+TGKIQKF LR
Sbjct: 515 PRAMVF-GELPKTSTGKIQKFELRR 538
>gi|240140988|ref|YP_002965468.1| AMP-dependent synthetase/acyl-CoA ligase [Methylobacterium
extorquens AM1]
gi|418059193|ref|ZP_12697148.1| o-succinylbenzoate--CoA ligase [Methylobacterium extorquens DSM
13060]
gi|240010965|gb|ACS42191.1| putative AMP-dependent synthetase/acyl-CoA ligase [Methylobacterium
extorquens AM1]
gi|373567234|gb|EHP93208.1| o-succinylbenzoate--CoA ligase [Methylobacterium extorquens DSM
13060]
Length = 545
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 198/443 (44%), Positives = 274/443 (61%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--VSATSSP 62
RLD ++ L H E+K+ VD + + + AL + + V+ +DD + S+P
Sbjct: 104 RLDAGALAFCLDHGEAKVFIVDREFARIGREALDKAGVSPL----VIDYDDPEFTGDSAP 159
Query: 63 ----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P+F W P EWD ++LNYTSGTT PKGVV+ HRG ++++ ++I
Sbjct: 160 VGETDYEDFLAAGDPDFGWAMPGDEWDAISLNYTSGTTGDPKGVVYHHRGAALLSLGNVI 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+P V+LWTLPMFH NGW + W ++ V GT++CLR+V P +Y+ + HGVTH+ G
Sbjct: 220 TAGLPQHAVYLWTLPMFHCNGWCFPWTLSIVAGTHVCLRQVRAPAMYAALAEHGVTHLSG 279
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V++ L ++P +PL R V LT+ A PP AVL GF V+H YGLTET G
Sbjct: 280 APIVMSTLLNAPEAQKRPLPRRVHFLTAAAPPPEAVLAAMGEAGFDVTHLYGLTETYGPA 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V AW W+ L+ E+AR KARQGVR L +DV PET S+ DG S GE++FR
Sbjct: 340 VVNAWHEDWDALSRDEQARKKARQGVRYPVLEGLDVRDPETMESLPADGTSLGEVMFRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + + WF +GD+GV H DGY+++KDRSKD+IISGGENISS EVE
Sbjct: 400 VVMRGYLKNPASTEAAFK-GGWFRSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
L+ +PA+ A+VA+ D WG+ PCAF+ LK ++ T E ++ +CR RL Y +
Sbjct: 459 DALFKHPAVAAAAVVAKPDAKWGETPCAFIELK--EGREATSEELVAWCRERLAPYKLPR 516
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGK+QKFVLRE
Sbjct: 517 HVVF-GELPKTSTGKVQKFVLRE 538
>gi|71082954|ref|YP_265673.1| acyl-CoA synthetase [Candidatus Pelagibacter ubique HTCC1062]
gi|71062067|gb|AAZ21070.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Candidatus
Pelagibacter ubique HTCC1062]
Length = 542
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 194/446 (43%), Positives = 275/446 (61%), Gaps = 17/446 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA------ 58
RLD +S +L HS++K+L VD Q + AL + + D S+
Sbjct: 101 RLDPNTISYILQHSDAKVLIVDRQFHDVIEKALKNVKNKITIIDIDDQDIDTSSFKRIGE 160
Query: 59 ---TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
S G+ N++W +P+ EW+ ++L YTSGTT +PKGVV+ HRG +++ S+ W
Sbjct: 161 LEYESFLNTGNENYEWKKPKDEWEAISLGYTSGTTGNPKGVVYHHRGSYLMATGSVTAWN 220
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+PN+ FL +PMFH NGW Y W +A + ICLR +DV ++ +I + VTH GA +
Sbjct: 221 MPNKLNFLCVVPMFHCNGWCYPWTLAMLHARVICLRNIDVKKMFELIDKYEVTHFGGAPI 280
Query: 176 VLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
VLNM+ ++P K L R V +LT+GA PP+ + + E+LGF V H YGLTET G ++ C
Sbjct: 281 VLNMIVNAPKEDQKALKRKVNVLTAGAPPPSIIFEKMENLGFEVMHVYGLTETYGHMLQC 340
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
AW WN+L ++ +KARQGVR V+ PET V DG++ GEI+ R +M
Sbjct: 341 AWNDDWNSLEKDKKNEIKARQGVRYPNTEGAIVMDPETMKPVPKDGKTMGEIMIRGNIVM 400
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY KD+E + M WF++GD+ V H DGY++I+DRSKD+IISGGENISS E+E+ +
Sbjct: 401 KGYYKDKEATDKSMA-GGWFHSGDLAVTHPDGYIKIQDRSKDIIISGGENISSIEIENAI 459
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP-TEEAIIEFCRARLPHYMAHKSV 412
+P+++ A+VA+ D+ WG+ PCAFV L + KP TE+ II+FCR L + KSV
Sbjct: 460 AKHPSVSLAAVVAKPDEKWGETPCAFVEL---IKDKPATEKEIIDFCRETLAGFKLPKSV 516
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
I D LPKT+TGKIQKF LR+ V +
Sbjct: 517 IFCD-LPKTSTGKIQKFELRKKVKEL 541
>gi|398878996|ref|ZP_10634099.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM67]
gi|398197542|gb|EJM84519.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM67]
Length = 540
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/449 (42%), Positives = 276/449 (61%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L H E+K+L D + + AA+ + L P L+ D
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHNVIHAAIGM------LDHPPLVIDVNDPEYGEGQ 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G P F W P +EW ++LNYTSGTT +PKGVV+ HRG ++ + +
Sbjct: 155 AVSDLDYEALLAEGDPAFAWQWPANEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ H VTH+C
Sbjct: 215 MTWAMGNHPVYLWTLPMFHCNGWCYPWTITALAGVHVFLRRVDPQKILTLIREHQVTHLC 274
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTET G
Sbjct: 275 GAPIVLNALVNMPESAKAAIDHPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTETYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW ++W+ L ERA++K+RQGVR L + V +T DGQ+ GE+ R
Sbjct: 335 VTLCAWHAEWDELPLEERAQIKSRQGVRYPTLEGVMVGDSKTLEPTPRDGQTIGEVFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ ++ + WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ E+
Sbjct: 395 NTVMKGYLKNPTATAEAF-EGGWFHTGDLAVCHPDGYVEIKDRLKDIIISGGENISTIEL 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +P + E A+VA+ D+ WG+ PCAF++LK + + E II FCR L +
Sbjct: 454 EGVLYRHPGVMEAAVVARPDEKWGETPCAFITLKAD-HQDVREADIISFCREHLAGFKVP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
++VI LPKT+TGKIQK+VLR+ A+
Sbjct: 513 RTVIF-TLLPKTSTGKIQKYVLRDRAKAL 540
>gi|398882650|ref|ZP_10637616.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM60]
gi|398198317|gb|EJM85275.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM60]
Length = 540
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/449 (42%), Positives = 277/449 (61%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L H E+K+L D + + AA+ + L P L+ D
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHNVIHAAIGM------LDHPPLVIDVNDPEYGEGQ 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G P F W P +EW ++LNYTSGTT +PKGVV+ HRG ++ + +
Sbjct: 155 AVSDLDYEALLAEGDPAFAWQWPANEWQAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ H VTH+C
Sbjct: 215 MTWAMGNHPVYLWTLPMFHCNGWCYPWTITALAGVHVFLRRVDPQKILTLIREHQVTHLC 274
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTET G
Sbjct: 275 GAPIVLNALVNMPESAKAAIDHPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTETYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW ++W+ L ERA++K+RQGVR L + V +T DGQ+ GE+ R
Sbjct: 335 VTLCAWHAEWDELPLEERAQIKSRQGVRYPTLEGVMVGDSKTLEPTPRDGQTIGEVFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ ++ ++ WF+TGD+ V H DGY+EIKDR KD+IISGGENIS+ E+
Sbjct: 395 NTVMKGYLKNPTATAEAF-ESGWFHTGDLAVCHPDGYVEIKDRLKDIIISGGENISTIEL 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +P + E A+VA+ D+ WG+ PCAF++LK + + E II FCR L +
Sbjct: 454 EGVLYRHPGVMEAAVVARPDEKWGETPCAFITLKAD-HQDVREADIISFCREHLAGFKVP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
++VI LPKT+TGKIQK+VLR+ A+
Sbjct: 513 RTVIF-TLLPKTSTGKIQKYVLRDRAKAL 540
>gi|445400257|ref|ZP_21429907.1| AMP-binding enzyme [Acinetobacter baumannii Naval-57]
gi|444783639|gb|ELX07498.1| AMP-binding enzyme [Acinetobacter baumannii Naval-57]
Length = 542
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 282/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +F+W PE EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWLAQGDASFEWQLPEDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I + V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKYKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S P E IIE C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGASVTPEE--IIEHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|297182053|gb|ADI18227.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
gamma proteobacterium HF0200_40H22]
Length = 539
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 275/445 (61%), Gaps = 21/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H E+K L D S + AL+L + V+ DD + +
Sbjct: 101 RLDAKTIAFILDHGEAKALLTDRLFSEVIKEALALIKREML----VIDIDDSESEGGECL 156
Query: 65 GHPNFKWV-----------QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +++ QPE EW ++L YTSGTT +PKG V+ HRG ++ + ++
Sbjct: 157 GEMDYESFIAGGGDTFVAGQPEDEWQALSLLYTSGTTGNPKGCVYHHRGAYLNALGNMST 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ V+LWTLPMFH +GW+++W + A GT++CLR V+ +++ I +GVTH+CGA
Sbjct: 217 MELNRNSVYLWTLPMFHCDGWTFTWAVTAAMGTHVCLRAVEPGAVFTSIAANGVTHMCGA 276
Query: 174 LVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V+NML+++P P + V+I T GA+PP+AV+ E+ GF V+H YGLTET G
Sbjct: 277 PIVMNMLANAPQELKTPFSQTVEIATGGAAPPSAVIEAMEANGFHVTHLYGLTETYGPAT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C + W LA ER+ ARQGV L + V P+T V DG++ GE++ R +
Sbjct: 337 VCIPQEDWPALALQERSSRIARQGVHYGTLENASVKDPDTMEDVPWDGETFGEVMIRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK++E + WF++GDIGV H+DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 397 VMKGYLKNEEATQAAFA-GGWFHSGDIGVRHADGYIEIKDRSKDIIISGGENISSLEVEE 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
LY +P + E A+VA+ D+ WG+ PCAFV+L +P E I++FCR + H+ A ++
Sbjct: 456 TLYRHPKVLEAAVVARTDETWGESPCAFVTLHPGEEAEPQE--IVDFCRENMAHFKAPRT 513
Query: 412 VIIEDELPKTATGKIQKFVLREIVN 436
V+ ELPKT+TGKIQKFVLRE N
Sbjct: 514 VVF-GELPKTSTGKIQKFVLREKAN 537
>gi|148255483|ref|YP_001240068.1| acyl-CoA synthetase [Bradyrhizobium sp. BTAi1]
gi|146407656|gb|ABQ36162.1| putative AMP-binding enzyme [Bradyrhizobium sp. BTAi1]
Length = 547
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 276/447 (61%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H ++K++ VD + S + AL L PKP +I DD S
Sbjct: 103 RLDAPSIAFQLDHGQAKIILVDPEFSGVISEALKLMSG----PKPFVIDVDDASYAGGSR 158
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P F+ +P EWD +A++YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 159 IGEIEYEVAVAAGDPGFEPRRPADEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W MAA G N+CLRKVD I+ +IK HGVTH+CG
Sbjct: 219 AGGLGQHPVYLWTLPMFHCNGWCFPWTMAAAAGINVCLRKVDPTKIFELIKTHGVTHMCG 278
Query: 173 ALVVLNMLSSSPSTKPLDR--PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N+L ++P R PV L +GA+PP AVL E++G ++H YGLTE G
Sbjct: 279 APIVYNVLINAPDAPKGKRETPVIGLIAGAAPPVAVLEGAENIGIKLTHVYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERA+LK RQGV + V++PET V DG++ GE++FR
Sbjct: 339 SVCAEQPGWDDLPPAERAQLKRRQGVPYPLQEAVTVLNPETMQEVPRDGETIGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + WF+TGD+GV+ + GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 399 IVMKGYLKNEKATQDAFA-GGWFHTGDLGVLDAHGYVIIKDRSKDIIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAF+ LK + TE II +CR+ + + K
Sbjct: 458 DILYKHPAVLFAAVVAKPDPKWGEVPCAFIELK--DGAQATEAEIIAYCRSHMSGFKTPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
V++ +PKT+TGKIQKF+LR VN+
Sbjct: 516 -VVVFGPIPKTSTGKIQKFLLRNEVNS 541
>gi|411009242|ref|ZP_11385571.1| AMP-binding protein [Aeromonas aquariorum AAK1]
Length = 540
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/444 (44%), Positives = 279/444 (62%), Gaps = 25/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ + H++SK++ VD + L AL+L + +P+LI DD
Sbjct: 104 RLDAESMAFIFQHAQSKVVLVDREFGTLVQKALALVEN-----QPLLIAIDDPLYQQGEL 158
Query: 64 VGHPNFK------------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
V ++ W+ P+ EW ++LNYTSGTT +PKGVV+ HRG + V+++
Sbjct: 159 VSELTYEGFLAEGNGDEPGWL-PQDEWQAISLNYTSGTTGNPKGVVYHHRGAHLNAVNNV 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W +P V+LWTLPMFH NGW + W +AA G ++CLR V IY + H VTH C
Sbjct: 218 LSWELPKHSVYLWTLPMFHCNGWCFPWTLAATAGVSVCLRHVQAAAIYEALHEHKVTHFC 277
Query: 172 GALVVLNMLSSS-PSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
A +VLNML+++ P+ K LD P+K +T+GA+PPA V+ E++G V+H YGLTET G
Sbjct: 278 AAPIVLNMLNNADPALKRGLDHPIKAMTAGAAPPATVIAGMEAMGIAVTHVYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V C + W T +RLKARQGV + +M V++P +G V DG++ GEIV R
Sbjct: 338 CVLCEPQRSWQGQDATTLSRLKARQGVASPLQGEMWVINPVSGEPVPRDGKTMGEIVLRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ S+ M + F +GD+ V H DGY+EIKDRSKD+IISGGENISS EV
Sbjct: 398 NVVMKGYLKNPVASAEAMAEGG-FRSGDLAVWHPDGYVEIKDRSKDIIISGGENISSLEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +P ++EVA++A D+ WG+ PCAFV LK ++ ++ +I FCR ++ H+ A
Sbjct: 457 EDVLYRHPDVDEVAVIAMPDEKWGEVPCAFVKLK--EGRELSQAELIAFCREQMAHFKAP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K +I LPKT+TGK+QKF+LR+
Sbjct: 515 KRIIF-TPLPKTSTGKVQKFMLRQ 537
>gi|445439653|ref|ZP_21441778.1| AMP-binding enzyme [Acinetobacter baumannii OIFC021]
gi|444751885|gb|ELW76583.1| AMP-binding enzyme [Acinetobacter baumannii OIFC021]
Length = 542
Score = 369 bits (947), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 280/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWIAQGDANFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K + V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIKHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK + P E II C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGATVTPEE--IIAHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKTATGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTATGKLQKFILRE 536
>gi|407938358|ref|YP_006853999.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
gi|407896152|gb|AFU45361.1| AMP-dependent synthetase and ligase [Acidovorax sp. KKS102]
Length = 548
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 268/445 (60%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K + VD + S AL+L +NT P+ + + A P V
Sbjct: 102 RLDPEAIAFMLDHGEAKAVIVDPEFSGTMAKALALRTANT----PIRVVEVQDALYGPAV 157
Query: 65 --------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G F W P EWD +ALNYTSGTT +PKGVV+ HRG +S+
Sbjct: 158 QSLGGTDYEAFVASGDAAFVWSLPADEWDAIALNYTSGTTGNPKGVVYHHRGAATNAISN 217
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW + W +AA G N+CLR+VD I+ I+ HGVTH
Sbjct: 218 VLEWDMPKHAVYLWTLPMFHCNGWCFPWTIAARAGVNVCLRRVDAQAIFDAIRTHGVTHY 277
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V +L ++P P VK + +GA+PPA+++ E +GF ++H YGLTE G
Sbjct: 278 CGAPIVHGLLVNAPEAMKAGVPAGVKAMVAGAAPPASMIEGMEKMGFDLTHVYGLTEVYG 337
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA W+ L ERARL ARQGVR D+ V+ PET V DG++ GEI+F+
Sbjct: 338 PATVCAKHEAWDALDIGERARLNARQGVRYHLERDVRVLDPETMQPVPQDGETMGEIMFK 397
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ + + WF++GD+ V + DGY++IKDRSKD+IISGGENISS E
Sbjct: 398 GNIAMKGYLKNPKATDEAFA-GGWFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIE 456
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +P + A+VA+ D WG+ PCAFV LK + T E I+ C+ L +
Sbjct: 457 VEDVLYRHPDVLAAAVVAKPDPKWGETPCAFVELK--AGAQTTPEDIVAHCKKHLAGFKV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++V+ ELPKT+TGKIQKF LR+
Sbjct: 515 PRAVVF-GELPKTSTGKIQKFELRK 538
>gi|226941059|ref|YP_002796133.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Laribacter
hongkongensis HLHK9]
gi|226715986|gb|ACO75124.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Laribacter
hongkongensis HLHK9]
Length = 550
Score = 369 bits (946), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/441 (40%), Positives = 281/441 (63%), Gaps = 12/441 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD-------VS 57
RLD ++ + H E+++L VD + + LA AL ++ V D ++
Sbjct: 106 RLDAATIAFQIDHGEAEVLLVDSEFASLAREALHKSGRRPLIVDIVDSEYDTGDRVGRIT 165
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P ++W Q E EWD + LNYTSGTT +PKGVV+ HRG ++ + +++ +
Sbjct: 166 YEELLAEGDPGYEWPQVEDEWDAITLNYTSGTTGNPKGVVYHHRGAYLNALGNIVATNMT 225
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V LW+LPMFH NGW ++W +AAVGGT++CLR+V+ +++ +I+ + V ++CGA VVL
Sbjct: 226 PDTVTLWSLPMFHCNGWCFNWSLAAVGGTSVCLRRVEAGLMFELIEKYKVNYMCGAAVVL 285
Query: 178 NML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+M ++ +P PV+ + + A P ++ E++GF ++H YGLTET G +C W
Sbjct: 286 SMFINAADEVRRPFPLPVRFIAAAAPVPVPIIRAAEAIGFCITHVYGLTETYGPATACIW 345
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
K ++N L+D ++ ++ RQGVR + V+ +T V DGQ+ GE++FR +M G
Sbjct: 346 KDEYNALSDDDQGDIRKRQGVRYHVQEAVSVLKSDTMEPVPADGQTLGEVMFRGNVVMKG 405
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + D WF+TGDIGV+H DGY+E+KDR+KD+IISGGENI + EVE+VLY
Sbjct: 406 YLKNPSATEQAFADG-WFHTGDIGVLHPDGYIELKDRAKDIIISGGENIPTIEVEAVLYQ 464
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+P++ E A+VA++D+ WG+ PCA+++LK+ +++P+ +++FCR RL HY + +
Sbjct: 465 HPSVLECAVVAKKDEKWGEIPCAYITLKFG-AEEPSTMELMQFCRERLAHYKVPRLYVF- 522
Query: 416 DELPKTATGKIQKFVLREIVN 436
LPKT+TGKIQKFVLR+ N
Sbjct: 523 GPLPKTSTGKIQKFVLRDQAN 543
>gi|424056884|ref|ZP_17794401.1| hypothetical protein W9I_00210 [Acinetobacter nosocomialis Ab22222]
gi|425741607|ref|ZP_18859752.1| AMP-binding enzyme [Acinetobacter baumannii WC-487]
gi|407440417|gb|EKF46934.1| hypothetical protein W9I_00210 [Acinetobacter nosocomialis Ab22222]
gi|425492172|gb|EKU58442.1| AMP-binding enzyme [Acinetobacter baumannii WC-487]
Length = 542
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/442 (44%), Positives = 281/442 (63%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + LA ALSL P+ I+ + + D+ + +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFVNLAREALSLIPNQHIIV--IDVADEEYEGENQFL 158
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 GSFEYEEWIAQGDANFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLRKVD ++ +I H V + CGA
Sbjct: 219 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRKVDPELVMQLIAKHKVDYFCGA 278
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+M+ + P K ++ V+++ +GA+PP AV+ ++G V+H YGLTET G
Sbjct: 279 PIVLSMIINLPKEKQPSIEHHVEVMVAGAAPPVAVIEGMRNIGINVNHVYGLTETYGPSA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ TE+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 339 LCASQAGWSDLSITEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 399 VMKGYLKNPKATEEAFA-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK + P E II C+ L + K
Sbjct: 458 VLYKHPAVLTAAVVAKPDERWQEVPCAFIELKTGATVTPEE--IIAHCQKELARFKVPKD 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VVI-TEIPKTSTGKLQKFILRE 536
>gi|226954310|ref|ZP_03824774.1| AMP-dependent synthetase/ligase [Acinetobacter sp. ATCC 27244]
gi|226834936|gb|EEH67319.1| AMP-dependent synthetase/ligase [Acinetobacter sp. ATCC 27244]
Length = 547
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 190/441 (43%), Positives = 277/441 (62%), Gaps = 18/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD K ++ +L H+E+K+L VD + P+A AL+ + I+ + ++ P
Sbjct: 101 RLDAKTIAFMLEHAEAKVLLVDPEFRPIAEEALTHLHQDMIVID--VFDNEYEGEQLPLG 158
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P F+W+ P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 159 QYEYESWIAQGDPEFEWLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILAC 218
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ + V+LWTLP+FH NGW ++W +AA GGTNICLR+VD +I+ I H V + CGA
Sbjct: 219 GMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRRVDPTLIFQYIAEHKVDYFCGAP 278
Query: 175 VVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VL+ML ++P + D V+++ +GA+PP A++ ++G V+H YGLTET G
Sbjct: 279 IVLSMLINTPQEQRTAFDHHVEVMVAGAAPPVAIIEGMRNIGINVNHVYGLTETYGPSAL 338
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA ++ W+ L+ E+A+L +RQGV M V+ PET V +DG++ GEI+FR +
Sbjct: 339 CASQAGWSELSIQEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNIV 398
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE V
Sbjct: 399 MKGYLKNPQATEEAFQ-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVEDV 457
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ A+VA+ D W + PCAF+ LK + E II C+ L + K V
Sbjct: 458 LYRHPAVMTAAVVAKPDPRWQEVPCAFIELK--QGSTTSAEEIILHCQKELARFKVPKDV 515
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+I E+PKT+TGK+QKF+LRE
Sbjct: 516 VI-TEIPKTSTGKLQKFILRE 535
>gi|393767207|ref|ZP_10355757.1| AMP-dependent synthetase and ligase [Methylobacterium sp. GXF4]
gi|392727304|gb|EIZ84619.1| AMP-dependent synthetase and ligase [Methylobacterium sp. GXF4]
Length = 545
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/444 (44%), Positives = 266/444 (59%), Gaps = 24/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + L H E+K+L D + + A AAL + PKP +I D P
Sbjct: 104 RLDAAAIRFCLQHGEAKVLITDREFARTAAAAL-----EGLEPKPFVIDVDDPDYDGPGA 158
Query: 65 -------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P W P EWD + LNYTSGTT PKGVV+ HRG ++ + ++
Sbjct: 159 RLGETAYEAFLAQGDPAHDWALPGDEWDAITLNYTSGTTGDPKGVVYHHRGAALLALGNV 218
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I + PV+LWTLPMFH NGW + W ++ V GT++CLR+V +Y ++ HGVTH+C
Sbjct: 219 ITGALGQHPVYLWTLPMFHCNGWCFPWTLSIVAGTHVCLRQVRAEAMYRLMAEHGVTHLC 278
Query: 172 GALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V+ ML ++P + D P V T+ A PP AVL GF V+H YGLTE+ G
Sbjct: 279 GAPIVMQMLINAPDAERRDLPRRVAFFTAAAPPPEAVLAGMSEAGFDVTHLYGLTESYGP 338
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V AW + W+ LA +RA KARQGVR L +DV P+T V DG + GE++ R
Sbjct: 339 AVVNAWNADWDALAADQRAAKKARQGVRYPVLEALDVRDPDTMAPVPADGTTIGEVMMRG 398
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + + R WF TGD+GV H DGY+++KDRSKD+IISGGENISS EV
Sbjct: 399 NVVMRGYLKNPKATQAAFR-GGWFRTGDLGVRHPDGYIQLKDRSKDIIISGGENISSIEV 457
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L+ +PA++ A+VA+ D WG+ PCAFV LK S P+ + +I++CR RL Y
Sbjct: 458 EDALFKHPAVSAAAVVAKPDAKWGETPCAFVELKPGAS--PSADELIQWCRGRLAAYKLP 515
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
+ VI ELPKT+TGK+QKF+LRE
Sbjct: 516 RHVIF-GELPKTSTGKVQKFILRE 538
>gi|374290731|ref|YP_005037766.1| putative AMP-dependent synthetase/ligase [Azospirillum lipoferum
4B]
gi|357422670|emb|CBS85509.1| putative AMP-dependent synthetase/ligase [Azospirillum lipoferum
4B]
Length = 550
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/445 (45%), Positives = 285/445 (64%), Gaps = 21/445 (4%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS 61
V RLD + ++ +L H E+K+L VD + S +A AL+L S P PV+ DD + T
Sbjct: 109 VNTRLDAEAIAFILKHGEAKILIVDREFSGVAKKALALLDS----PIPVVDIDDPTYTGG 164
Query: 62 PTVGHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+G +++ W P EW +ALNYTSGTT +PKGVV+ HRG ++ VS+
Sbjct: 165 ELIGDRDYEAFISDVGAEHPWTLPADEWQAIALNYTSGTTGNPKGVVYHHRGAYLNAVSN 224
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+ W + + PV+LWTLPMFH NGW + W +A GT +CLR+V + +I+ VT+
Sbjct: 225 ALSWNMGDAPVYLWTLPMFHCNGWCFPWTIAVTAGTAVCLRQVRPDAVLKLIREERVTNF 284
Query: 171 CGALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +VLNML+++P+ + +++ VK++ +GA+PPAAV+ E +G+ V+H YGLTE G
Sbjct: 285 CGAPIVLNMLNNAPAELKQGIEQTVKVMVAGAAPPAAVIAGMERMGWEVTHVYGLTECYG 344
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
V C W +W+ L+ E+A +KARQGVR L + V P T V DG++ GEI+ R
Sbjct: 345 PTVVCVWHDRWDGLSLDEKAAIKARQGVRGPMLEAVIVADPFTLEPVPKDGRTMGEIMMR 404
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++M GYLK+ + + WF+TGD+ V H DGY+EIKDRSKD+IISGGENISS E
Sbjct: 405 GNNVMKGYLKNPKATDEAFA-GGWFHTGDLAVWHEDGYVEIKDRSKDIIISGGENISSIE 463
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +P + E A+VA+ D+ WG+ PCAFV+LK TE II FCR+ + H+
Sbjct: 464 VEDVLYKHPEVLEAAVVARHDEKWGETPCAFVTLK--DGATATEADIIAFCRSHMAHFKC 521
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++V+ LPKT+TGKIQK+VLR+
Sbjct: 522 PRTVVF-GPLPKTSTGKIQKYVLRK 545
>gi|307944502|ref|ZP_07659842.1| AMP-dependent synthetase and ligase [Roseibium sp. TrichSKD4]
gi|307772251|gb|EFO31472.1| AMP-dependent synthetase and ligase [Roseibium sp. TrichSKD4]
Length = 549
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 192/447 (42%), Positives = 277/447 (61%), Gaps = 20/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-----------PKPVLIH 53
RLD ++ L H+ +K+L D + S AL+L N ++ +P+ H
Sbjct: 110 RLDAGIIAFQLDHANTKVLITDREFSTTMKEALALAKVNPVIIDYSDPVFPQDGEPLGTH 169
Query: 54 DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
D + S G P++ W P+ EWD ++LNYTSGTT +PKGVV+ HRG +++ +++I
Sbjct: 170 DYETFLKS---GDPDYAWSLPDDEWDAISLNYTSGTTGNPKGVVYHHRGAYLLAQANIIT 226
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ PV+LWTLPMFH NGW + W ++ V GT++CLR V ++ ++ VTH+CGA
Sbjct: 227 ASMAKHPVYLWTLPMFHCNGWCFPWSLSVVAGTHVCLRWVRPKALWDLLADENVTHLCGA 286
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
++++ L ++P + L+ V+ T+ A PP +VL + GF V+H YGLTE G V
Sbjct: 287 PIIMSTLLNAPKEDVRNLNDVVEFFTAAAPPPESVLAAMKEAGFNVTHLYGLTEVYGPAV 346
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
WK +W+ L +E+A KARQGVR + L +DV+ PET V DG S GE++FR
Sbjct: 347 VNDWKREWDGLTASEQASKKARQGVRYVALEGLDVLDPETMQPVPADGTSLGEVMFRGNV 406
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+++ ++ WF++GD+GV H DGY+++KDRSKD+IISGGENISS EVE
Sbjct: 407 VMKGYLKNEDATNEAFA-GGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVED 465
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P I A+VA+ D WG+ PCAFV + S T+ II +CR L H+ A ++
Sbjct: 466 VLYKHPDIQGAAVVARPDDKWGETPCAFVEIAPGSSVSETD--IIAYCRENLAHFKAPRT 523
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
V+ ELPKT+TGKIQKF LRE A+
Sbjct: 524 VVFC-ELPKTSTGKIQKFELRERAKAL 549
>gi|414173434|ref|ZP_11428197.1| hypothetical protein HMPREF9695_01843 [Afipia broomeae ATCC 49717]
gi|410892086|gb|EKS39882.1| hypothetical protein HMPREF9695_01843 [Afipia broomeae ATCC 49717]
Length = 549
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 273/449 (60%), Gaps = 22/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H ++++ VD + + AL L PKP++I DD +
Sbjct: 105 RLDAASIAFQLDHGGARIILVDPEFGGVISDALGLMKG----PKPLVIDVDDAAFAGGKR 160
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P F W+ P+ EWD +AL YTSGTT +PKGVV +RG ++ VS+++
Sbjct: 161 IGELEYEAAVASGDPEFAWLTPDDEWDAIALGYTSGTTGNPKGVVTHYRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ P++LWTLPMFH NGW + W +AA G N+CLRKVD I+ +IK HGVTH+CG
Sbjct: 221 AGNLGTHPIYLWTLPMFHCNGWCFPWTIAASAGVNVCLRKVDPAKIFELIKIHGVTHMCG 280
Query: 173 ALVVLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P +PV L +GA+PP AVL E +G ++H YGLTE G
Sbjct: 281 APIVYNTLINAPDAPKSKSAKPVVGLIAGAAPPVAVLEGAEGIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L +RA+LK RQGV + V+ PET V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDELPADQRAQLKRRQGVPYPLQEAVTVLDPETMREVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + + WF+TGD+GV+ DGY+ IKDRSKD+IISGGENISS EVE
Sbjct: 401 IVMKGYLKNEKATREAF-EGGWFHTGDLGVLDKDGYVIIKDRSKDIIISGGENISSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ A+VA+ D WG+ PCAFV LK TE I+ +C++ LP + + K
Sbjct: 460 DVLYKHPAVLFAAVVAKPDPKWGEVPCAFVELK--DGATATEAEILSYCKSILPGFKSPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
SV+ +PKT+TGKIQKF LR+ N+
Sbjct: 518 SVVF-GAIPKTSTGKIQKFALRDQANSAK 545
>gi|91762622|ref|ZP_01264587.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Candidatus
Pelagibacter ubique HTCC1002]
gi|91718424|gb|EAS85074.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Candidatus
Pelagibacter ubique HTCC1002]
Length = 542
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 274/446 (61%), Gaps = 17/446 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA------ 58
RLD +S +L HS++K+L VD Q + AL + + D S+
Sbjct: 101 RLDPNTISYILQHSDAKVLIVDRQFHDVIEKALKNVKNKITIIDIDDQDIDTSSFKRIGE 160
Query: 59 ---TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
S G+ N++W +P+ EW+ ++L YTSGTT +PKGVV+ HRG +++ S+ W
Sbjct: 161 LEYESFLNTGNENYEWKKPKDEWEAISLGYTSGTTGNPKGVVYHHRGSYLMATGSVTAWN 220
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+PN+ FL +PMFH NGW Y W +A + ICLR +DV ++ +I + VTH GA +
Sbjct: 221 MPNKLNFLCVVPMFHCNGWCYPWTLAMLHARVICLRNIDVKKMFELIDKYEVTHFGGAPI 280
Query: 176 VLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
VLNM+ ++P K L R V +LT+GA PP+ + + E+LGF V H YGLTET G ++ C
Sbjct: 281 VLNMIVNAPKEDQKALKRKVNVLTAGAPPPSIIFEKMENLGFEVMHVYGLTETYGHMLQC 340
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
AW WN+L ++ +KARQGVR V+ PET DG++ GEI+ R +M
Sbjct: 341 AWNDDWNSLEKDKKNEIKARQGVRYPNTEGAIVMDPETMKPAPKDGKTMGEIMIRGNIVM 400
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY KD+E + M WF++GD+ V H DGY++I+DRSKD+IISGGENISS E+E+ +
Sbjct: 401 KGYYKDKEATDKSMA-GGWFHSGDLAVTHPDGYIKIQDRSKDIIISGGENISSIEIENAI 459
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP-TEEAIIEFCRARLPHYMAHKSV 412
+P+++ A+VA+ D+ WG+ PCAFV L + KP TE+ II+FCR L + KSV
Sbjct: 460 AKHPSVSLAAVVAKPDEKWGETPCAFVEL---IEDKPATEKEIIDFCRETLAGFKLPKSV 516
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
I D LPKT+TGKIQKF LR+ V +
Sbjct: 517 IFCD-LPKTSTGKIQKFELRKKVKEL 541
>gi|149374923|ref|ZP_01892696.1| putative AMP-binding enzyme [Marinobacter algicola DG893]
gi|149360812|gb|EDM49263.1| putative AMP-binding enzyme [Marinobacter algicola DG893]
Length = 536
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 190/445 (42%), Positives = 282/445 (63%), Gaps = 21/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD +S +L H E+++LF D Q AA++ N P+L+ D A S +
Sbjct: 100 RLDAGALSFILAHGEARVLFYDTQWEEQVRAAVAELEVN-----PLLVAIDSKAGKSQGL 154
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
+++ W EWD ++LNYTSGTT +PKGVV+ HRG ++ +++ +
Sbjct: 155 ADLDYEALLQEGDAEAGWQHAADEWDAISLNYTSGTTGNPKGVVYHHRGAYLAAMTNAMA 214
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + + V+LWTLPMFH NGW+Y+W + AVGGT++CLR+VD IY I+ +GVTH+CGA
Sbjct: 215 FDMTAETVYLWTLPMFHCNGWAYTWAITAVGGTHVCLREVDSQEIYRRIEDYGVTHMCGA 274
Query: 174 LVVLNMLSS--SPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VV+N+L ++ L RP + GA+PP++V+ + E +GF ++H YGLTET G
Sbjct: 275 PVVMNLLIQDLGRASLTLSRPARFALGGAAPPSSVIRKAEEIGFQITHLYGLTETFGPST 334
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C + +W L +RA+ +RQGV GL ++ V+ +G +V DG GEI R +
Sbjct: 335 LCVPQPEWQQLPLEDRAKKMSRQGVPMHGLDEVAVLDMVSGEAVPADGNVMGEICIRGNT 394
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK++E + D WF+TGD+ V+H D Y+EI+DR+KDVIISGGENISS EVE
Sbjct: 395 VMKGYLKNEEATEKSFSDG-WFHTGDLAVMHPDHYVEIRDRAKDVIISGGENISSLEVEE 453
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P ++E A+VA D+ WG+ PCAF++ + ++ T E II FCR ++ H+ A +
Sbjct: 454 VLYRHPRVSEAAVVAMADEKWGEVPCAFIN-PIDDVEELTHEEIIAFCREQMAHFKAPRK 512
Query: 412 VIIEDELPKTATGKIQKFVLREIVN 436
V++ ELPKTATGKI+K +LR+ ++
Sbjct: 513 VVL-GELPKTATGKIRKNILRDTLS 536
>gi|255561464|ref|XP_002521742.1| AMP dependent ligase, putative [Ricinus communis]
gi|223538955|gb|EEF40552.1| AMP dependent ligase, putative [Ricinus communis]
Length = 261
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 172/254 (67%), Positives = 210/254 (82%), Gaps = 2/254 (0%)
Query: 188 PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTER 247
PL PV ILT+GA PPAAVLLRTESLGFVVSH YGLTETAG VVSCAWK +WN L + ER
Sbjct: 4 PLKSPVHILTAGAPPPAAVLLRTESLGFVVSHGYGLTETAGVVVSCAWKPKWNMLPENER 63
Query: 248 ARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCM 307
ARL+ARQGV+ G +MDV+ P+TG+SVK DG S GEIV R GS+M+GYLKD +G+S C+
Sbjct: 64 ARLRARQGVKIAGFTEMDVIDPKTGLSVKRDGLSLGEIVLRGGSVMMGYLKDPDGTSKCL 123
Query: 308 RDND--WFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALV 365
+++D W YTGD+GV+H DGYLEIKDRSKDVIISGGENISS EVESVLY NP +NE A+V
Sbjct: 124 KEDDDGWLYTGDVGVMHPDGYLEIKDRSKDVIISGGENISSVEVESVLYSNPVVNEAAVV 183
Query: 366 AQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGK 425
A+ D++WG+RPCAFVSLK ++++ +E+ IIE+CR R+ HYMA K+V+ +DELPKT+TGK
Sbjct: 184 ARPDEYWGERPCAFVSLKDGVTERVSEKDIIEYCRERMAHYMAPKTVVFQDELPKTSTGK 243
Query: 426 IQKFVLREIVNAVN 439
IQK LREI A+
Sbjct: 244 IQKLALREIAKAMG 257
>gi|365093300|ref|ZP_09330366.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
gi|363414474|gb|EHL21623.1| AMP-dependent synthetase and ligase [Acidovorax sp. NO-1]
Length = 548
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 195/445 (43%), Positives = 268/445 (60%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K + VD + S AL+L P P+ + + A P V
Sbjct: 102 RLDPEAIAFMLDHGEAKAVIVDPEFSGTLAKALAL----RTAPTPLRVIEVQDALYGPAV 157
Query: 65 --------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G F W P EWD +ALNYTSGTT +PKGVV+ HRG +S+
Sbjct: 158 QSLGGTDYDAFVASGDAAFAWSLPADEWDAIALNYTSGTTGNPKGVVYHHRGAATNAISN 217
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW + W +AA G N+CLR+VD I+ I++HGVTH
Sbjct: 218 VLEWDMPKHAVYLWTLPMFHCNGWCFPWTIAARAGVNVCLRRVDAQAIFDAIRNHGVTHY 277
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V +L ++P P VK + +GA+PPA+++ E +GF ++H YGLTE G
Sbjct: 278 CGAPIVHGLLVNAPDAMKAGIPAGVKAMVAGAAPPASMIEGMEKMGFDLTHVYGLTEVYG 337
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA W+ L ERARL ARQGVR D+ V+ PET + V DG++ GEI+F+
Sbjct: 338 PATVCAKHEAWDGLDIGERARLNARQGVRYHLERDVRVLDPETMLPVPQDGETMGEIMFK 397
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ + + WF++GD+ V + DGY++IKDRSKD+IISGGENISS E
Sbjct: 398 GNIAMKGYLKNPKATEEAFA-GGWFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIE 456
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +P + A+VA+ D WG+ PCAFV LK + T E I+ C+ L +
Sbjct: 457 VEDVLYRHPDVLAAAVVAKPDAKWGETPCAFVELK--AGAQTTPEDIVAHCKKHLAGFKV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++V+ ELPKT+TGKIQKF LR+
Sbjct: 515 PRAVVF-GELPKTSTGKIQKFELRK 538
>gi|390576580|ref|ZP_10256639.1| acyl-CoA synthetase [Burkholderia terrae BS001]
gi|389931483|gb|EIM93552.1| acyl-CoA synthetase [Burkholderia terrae BS001]
Length = 550
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 270/442 (61%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL----PKPVLIHDDVSATS 60
RLD + +L H E+K L VD + LAL A FP I+ +P +AT
Sbjct: 102 RLDAASILYMLRHGEAKALIVDSEYGELALRAAREFPQLRIISVSDAQPADTRHFPNATD 161
Query: 61 SPT---VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P F W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFLQAGDPQFAWTPPADEWDAIALNYTSGTTGEPKGVVYHHRGAYLNALSNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLP+FH NGW + W +AA G N+CLRK D +++ +I+ +TH CGA +V
Sbjct: 222 KHAVYLWTLPLFHCNGWCFPWTVAARAGVNVCLRKFDPKLVFDLIRRERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ L+++P+ + V + +GA+P AV+ R +S+GF ++H YGLTE G CA
Sbjct: 282 SALANAPAEWRDGIAHRVSTMVAGAAPSPAVIARMKSIGFDLTHVYGLTEVYGPASVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ W+ L D ERARL ARQGVR A +DV+ P+T V DG++ GE++FR M G
Sbjct: 342 QDAWDALDDDERARLNARQGVRYHLQAAVDVLDPDTLEPVPRDGETIGELMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK++ + R WF+TGD+GV+ +DGY+ IKDRSKD+IISGGEN+SS E+E LY
Sbjct: 402 YLKNERATEAAFR-GGWFHTGDLGVITADGYVRIKDRSKDIIISGGENVSSIEIEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA++ A+VA D WG+ PCAFV LK + E II CR L + K+V
Sbjct: 461 HPAVSVAAVVAMPDAKWGEVPCAFVELK--DGADASAEEIISHCRQLLAGFKLPKAVFF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFELRARVKS 539
>gi|399545294|ref|YP_006558602.1| medium-chain-fatty-acid--CoA ligase [Marinobacter sp. BSs20148]
gi|399160626|gb|AFP31189.1| Medium-chain-fatty-acid--CoA ligase [Marinobacter sp. BSs20148]
Length = 537
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 195/442 (44%), Positives = 280/442 (63%), Gaps = 21/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E+++LF D + AA+S + P+LI + A S +
Sbjct: 100 RLDAATLAFILEHGEARILFYDTDWENVVRAAVS-----GLDVPPLLISIESKAGKSDGL 154
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
+++ W +P EWD +ALNYTSGTT +PKGVV+ HRG F+ +++ +
Sbjct: 155 AQQDYESFLLEGSAETCWQRPNDEWDAIALNYTSGTTGNPKGVVYHHRGAFLAAMTNSMV 214
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+++ + VFLWTLPMFH NGW+Y+W + AVGGT++CLR VD IY I+ +GVTH+CGA
Sbjct: 215 FQMTPETVFLWTLPMFHCNGWAYTWAITAVGGTHVCLRNVDPMNIYRHIETYGVTHMCGA 274
Query: 174 LVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VV+NML + L R + GA+PP++V+ + E +GF ++H YGLTET G
Sbjct: 275 PVVMNMLLQELGREELKLSRSTQFALGGAAPPSSVIRKAEEIGFQITHLYGLTETFGPSA 334
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C + W L +RA +RQGV T GL ++ V+ +G V DG++ GEI R +
Sbjct: 335 LCMPQPDWQALPLEQRALKMSRQGVSTHGLDEIAVLDMVSGEYVPADGKTMGEICIRGNT 394
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ + WF+TGD+ V+H D Y+EI+DR+KDVIISGGENISS EVE
Sbjct: 395 VMKGYLKNPEATAGAF-SHGWFHTGDLAVMHPDQYVEIRDRAKDVIISGGENISSLEVEE 453
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P ++E A+VA D+ WG+ PCAFVSL + S++ T II FCR +PH+ A +
Sbjct: 454 VLYRHPQVSEAAVVAIADEKWGEVPCAFVSLT-DNSEEITSADIIAFCREHMPHFKAPRK 512
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ ELPKTATGK++K +LR+
Sbjct: 513 VVF-GELPKTATGKVRKNILRD 533
>gi|221068479|ref|ZP_03544584.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
gi|220713502|gb|EED68870.1| AMP-dependent synthetase and ligase [Comamonas testosteroni KF-1]
Length = 548
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 272/442 (61%), Gaps = 18/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K L VD + +PL AL L S + + + D V ++ +
Sbjct: 102 RLDAETLAFMLDHGEAKALIVDPEFAPLMARALKLRQSTAPI-YVIQVEDPVYGEAAEQI 160
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G F W P EWD +ALNYTSGTT +PKGVV+ HRG +S++++
Sbjct: 161 GVTDYESFVAQGDAGFDWQWPGDEWDAIALNYTSGTTGNPKGVVYHHRGAHNNAISNVLE 220
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P V+LWTLPMFH NGW + W +AA N+CLR+VD I+ I++HGV+H CGA
Sbjct: 221 WDMPKHAVYLWTLPMFHCNGWCFPWTVAARAAVNVCLRRVDAQAIFDAIRNHGVSHYCGA 280
Query: 174 LVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V ++L ++P+ P VK + +GA+PPA+++ E++GF ++H YGLTET G
Sbjct: 281 PIVHSLLVNAPAVMKQGVPAGVKAMVAGAAPPASMIEGMEAMGFDITHVYGLTETYGPAT 340
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA WN L ERARL +RQGVR V+ PET V DGQ+ GEI+F+
Sbjct: 341 VCAKHEGWNALDIGERARLNSRQGVRYHLQRSAAVLDPETMQPVPRDGQTMGEIMFQGNI 400
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
M GYLK+ + + R WF++GD+ V H DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 401 AMKGYLKNPQATQEAFR-GGWFHSGDLAVQHPDGYIQIKDRSKDIIISGGENISSIEVED 459
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D WG+ PCAF+ LK + T E I+ C+ L Y ++
Sbjct: 460 VLYRHPAVLAAAVVAKPDPKWGETPCAFIELK--AGAETTAEDIMAHCKKHLAGYKVPRA 517
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGKIQKF LR+
Sbjct: 518 VVF-GELPKTSTGKIQKFELRK 538
>gi|115524880|ref|YP_781791.1| acyl-CoA synthetase [Rhodopseudomonas palustris BisA53]
gi|115518827|gb|ABJ06811.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisA53]
Length = 549
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 200/449 (44%), Positives = 274/449 (61%), Gaps = 22/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL+ ++ L H +KL+ VD + + + A++L PKP+LI D +A P
Sbjct: 105 RLEPASIAFQLDHGGAKLVLVDPEFAGVIEDAIALMAG----PKPILIDVDDAAFGPPRR 160
Query: 63 ----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F P+ EWD ++L YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGEIEYEAAVAAGDPGFAATLPQDEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W +AA G ++CLRKVD I+ +I HGVTH+ G
Sbjct: 221 AAGLGQHPVYLWTLPMFHCNGWCFPWTLAAAAGVSVCLRKVDPAKIFELIPKHGVTHMAG 280
Query: 173 ALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++PS +PV L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 281 APIVYNTLINAPSAPKGAAAKPVVGLIAGAAPPVAVLAGAESIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERA+LK RQGV + V+ PET V DG++ GE++FR
Sbjct: 341 AVCAEQPGWDDLPLAERAQLKRRQGVPYPLQEAVTVLDPETMTEVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + + WF+TGD+GV+ + GY+ IKDRSKD+IISGGEN+SS EVE
Sbjct: 401 IVMKGYLKNEKATQEAFQ-GGWFHTGDLGVLDASGYVIIKDRSKDIIISGGENVSSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ A+VA+ D WG+ PCAFV LK +S TE II FCR +LP + K
Sbjct: 460 DVLYKHPAVLFAAVVAKPDPKWGEVPCAFVELKEGMSA--TEAEIIAFCRDQLPGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
VI +PKT+TGKIQKF+LR+ V +
Sbjct: 518 -VIEFTAIPKTSTGKIQKFMLRDQVKSAK 545
>gi|365883826|ref|ZP_09422938.1| putative AMP-binding enzyme [Bradyrhizobium sp. ORS 375]
gi|365287705|emb|CCD95469.1| putative AMP-binding enzyme [Bradyrhizobium sp. ORS 375]
Length = 547
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 200/447 (44%), Positives = 276/447 (61%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H ++K++ VD + S + AL L KP +I DD S T
Sbjct: 103 RLDAPSIAFQLDHGQAKIILVDPEFSGVISEALKLMSGA----KPFVIDVDDASYTGGSR 158
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P+F+ +P EWD +A++YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 159 IGEIEYEAAVAAGDPSFEPRRPTDEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W MAA G N+CLRKV+ I+ +IK HGVTH+CG
Sbjct: 219 AGGLGQHPVYLWTLPMFHCNGWCFPWTMAAAAGVNVCLRKVEPTRIFELIKAHGVTHMCG 278
Query: 173 ALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N+L ++P ++PV L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 279 APIVYNVLINAPDAPKGKREKPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERARLK RQGV + V+ PET V DG++ GE++FR
Sbjct: 339 SVCAEQPGWDDLPAPERARLKRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 399 IVMKGYLKNEKATQEAFA-GGWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAFV LK + TE II +CR+ + + K
Sbjct: 458 DILYKHPAVLFAAVVAKPDPKWGEVPCAFVELK--DGAQATEAEIIAYCRSHMSGFKTPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
V++ +PKT+TGKIQKF+LR VN+
Sbjct: 516 -VVVFGPIPKTSTGKIQKFLLRNEVNS 541
>gi|241765990|ref|ZP_04763913.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
gi|241364039|gb|EER59283.1| AMP-dependent synthetase and ligase [Acidovorax delafieldii 2AN]
Length = 548
Score = 368 bits (944), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 268/445 (60%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K + VD + + + AL+L S T P+L+ D A P
Sbjct: 102 RLDPEAIAFMLDHGEAKAVIVDPEFAGVMAKALALRQSQT----PLLLIDVEDALYGPAS 157
Query: 65 --------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G P F W P EWD +ALNYTSGTT +PKGVV+ HRG +S+
Sbjct: 158 QKLGSTTYEAFVAGGDPQFAWELPADEWDAIALNYTSGTTGNPKGVVYHHRGAATNAISN 217
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW + W +AA G N+CLR+V+ I+ I+HHGVTH
Sbjct: 218 VLEWDMPKHAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRRVEAQAIFDAIRHHGVTHY 277
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V +L ++P+ P VK + +GA+PPA+++ E +GF ++H YGLTE G
Sbjct: 278 CGAPIVHGLLVNAPAAMKEGVPAGVKAMVAGAAPPASMIEGMEKMGFDLTHVYGLTEVYG 337
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA WN L ERARL ARQGVR V+ ET V DG++ GEI+FR
Sbjct: 338 PATVCARHDAWNDLDIGERARLNARQGVRYHLQRAARVLDSETMRPVPWDGETMGEIMFR 397
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ + + WF++GD+ V + DGY++IKDRSKD+IISGGENISS E
Sbjct: 398 GNIAMKGYLKNPKATEEAFA-GGWFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIE 456
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +P + A+VA+ D WG+ PCAFV LK + T E I+ C+ L +
Sbjct: 457 VEDVLYRHPDVLAAAVVAKPDAKWGETPCAFVELK--AGAQTTVEDIVAHCKKHLAGFKV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++V+ ELPKT+TGKIQKF LR+
Sbjct: 515 PRAVVF-GELPKTSTGKIQKFELRK 538
>gi|418530411|ref|ZP_13096334.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni ATCC
11996]
gi|371452130|gb|EHN65159.1| long-chain-fatty-acid--CoA ligase [Comamonas testosteroni ATCC
11996]
Length = 548
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 271/442 (61%), Gaps = 18/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K L VD + + L AL L + + + D V ++ +
Sbjct: 102 RLDAETLAFMLDHGEAKALIVDPEFAALMARALKLRKGTEPI-HVIQVEDSVYGEAAEQI 160
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G F W P EWD +ALNYTSGTT +PKGVV+ HRG +S++++
Sbjct: 161 GVIDYESFVAQGDAGFDWQWPGDEWDAIALNYTSGTTGNPKGVVYHHRGAHNNAISNVLE 220
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P V+LWTLPMFH NGW + W +AA N+CLR+VD ++ I++HGVTH CGA
Sbjct: 221 WDMPKHAVYLWTLPMFHCNGWCFPWTVAARAAVNVCLRRVDAQAVFDAIRNHGVTHYCGA 280
Query: 174 LVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V ++L ++P+ P VK + +GA+PPA+++ E++GF ++H YGLTET G
Sbjct: 281 PIVHSLLVNAPAAMKQGVPAGVKAMVAGAAPPASMIEGMEAMGFDITHVYGLTETYGPAT 340
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA WN L ERARL +RQGVR V+ PET V DGQ+ GEI+F+
Sbjct: 341 VCAKHESWNALDIGERARLNSRQGVRYHLQRSAAVLDPETMQPVPRDGQTMGEIMFQGNI 400
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
M GYLK+ + + R WF++GD+ V H DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 401 AMKGYLKNPQATQEAFR-GGWFHSGDLAVQHPDGYIQIKDRSKDIIISGGENISSIEVED 459
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D WG+ PCAF+ LK + TE+ II C+ L Y ++
Sbjct: 460 VLYRHPAVLAAAVVAKPDPKWGETPCAFIELK--AGAETTEQDIIAHCKKHLAGYKVPRA 517
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ ELPKT+TGKIQKF LR+
Sbjct: 518 VVF-GELPKTSTGKIQKFELRK 538
>gi|146340775|ref|YP_001205823.1| acyl-CoA synthetase [Bradyrhizobium sp. ORS 278]
gi|146193581|emb|CAL77598.1| putative AMP-binding enzyme [Bradyrhizobium sp. ORS 278]
Length = 547
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 199/447 (44%), Positives = 276/447 (61%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H+++K++ VD + S + AL L KP +I DD S
Sbjct: 103 RLDAPSIAFQLDHAQAKIILVDPEFSGVISEALKLMSGA----KPFVIDVDDASYAGGSR 158
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P+F+ +P EWD +A++YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 159 IGEIEYEAAVATGDPSFEPRRPTDEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W MAA G N+CLRKV+ I+ +IK HGVTH+CG
Sbjct: 219 AGGLGQHPVYLWTLPMFHCNGWCFPWTMAAAAGVNVCLRKVEPTKIFELIKTHGVTHMCG 278
Query: 173 ALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N+L ++P DRPV L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 279 APIVYNVLINAPDAPKGKRDRPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERAR+K RQGV + V++PET V DG++ GE++FR
Sbjct: 339 SVCAEQPGWDDLPAPERARMKRRQGVPYPLQEAVTVLNPETMQEVPRDGETIGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 399 IVMKGYLKNEKATQDAFA-GGWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAF+ LK K E II +CR+ + + K
Sbjct: 458 DILYKHPAVLFAAVVAKPDPKWGEVPCAFIELKDGAQAKEAE--IIAYCRSHMSGFKTPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
V++ +PKT+TGKIQKF+LR VN+
Sbjct: 516 -VVVFGPIPKTSTGKIQKFLLRNEVNS 541
>gi|254482321|ref|ZP_05095561.1| AMP-binding enzyme, putative [marine gamma proteobacterium
HTCC2148]
gi|214037326|gb|EEB77993.1| AMP-binding enzyme, putative [marine gamma proteobacterium
HTCC2148]
Length = 540
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 273/445 (61%), Gaps = 27/445 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD ++ +L H E+K L VD + S +A AL + ++ D+ T P
Sbjct: 101 RLDAATIAYILEHGEAKALLVDTEFSSMAKEALKQSGRDILV-------IDIQDTQGPGG 153
Query: 63 ------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G P F + P EWD +ALNYTSGTT PKGVV+ HRG + TV++
Sbjct: 154 ERIGALTYDELLAQGDPEFAYTLPNDEWDALALNYTSGTTGRPKGVVYSHRGAWTNTVNN 213
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+I W +P+ PV+LWTLP+FH NGW + W + + GT++ LR IY+ GVTH+
Sbjct: 214 VITWEMPHHPVYLWTLPLFHCNGWCFPWTITLLAGTHVFLRSPKADAIYNAFAGEGVTHL 273
Query: 171 CGALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA ++++M+S + + + VK++T+ A PPA+V+ E++G ++H YGLTE G
Sbjct: 274 CGAPIIMSMISGAAPQDQREFTQHVKMMTAAAPPPASVIASIEAMGISITHVYGLTEVYG 333
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
V CA K W L+ +RA LKARQGV D+ V++PETG V DGQ+ GEIVFR
Sbjct: 334 PAVVCAEKPSWRELSVDDRANLKARQGVAYELEEDVRVLNPETGQPVPWDGQTLGEIVFR 393
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M GYLK+ E ++ +D WF++GDI V HSDGY+EI+DRSKD+IISGGENISS E
Sbjct: 394 GNIVMKGYLKEPEETAKAFKDG-WFWSGDIAVHHSDGYIEIRDRSKDIIISGGENISSIE 452
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE LY +PA++ A+VA ++ WG+ PCAFV L + TE+A+++ +++L +
Sbjct: 453 VEKALYSHPAVSLAAVVAMPNEKWGEVPCAFVELA--EGAEVTEQALLDHAKSKLASFQR 510
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
K VI ELPKT TGKI+K LR+
Sbjct: 511 PKKVIF-GELPKTTTGKIRKNELRD 534
>gi|414166869|ref|ZP_11423099.1| hypothetical protein HMPREF9696_00954 [Afipia clevelandensis ATCC
49720]
gi|410892147|gb|EKS39942.1| hypothetical protein HMPREF9696_00954 [Afipia clevelandensis ATCC
49720]
Length = 548
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 199/450 (44%), Positives = 277/450 (61%), Gaps = 24/450 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA------ 58
RLD ++ L H +K++ VD + S + AL+L PKP++I D +A
Sbjct: 104 RLDAAAIAFQLDHGGAKIILVDPEFSGVITDALALMKG----PKPLVIDVDDAAFDGGKR 159
Query: 59 ------TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ G P F W++PE EWD +AL YTSGTT +PKGVV +RG ++ VS+++
Sbjct: 160 IGEIEYEAAVASGDPEFTWLKPEDEWDAIALGYTSGTTGNPKGVVTHYRGAYLNAVSNIL 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ P++LWTLPMFH NGW + W +AA G N+CLRKVD I+ +I HGVTH+CG
Sbjct: 220 AGGLGTHPIYLWTLPMFHCNGWCFPWTIAASAGVNVCLRKVDPAKIFELIPKHGVTHMCG 279
Query: 173 ALVVLNMLSSSPSTKPLDR---PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
A +V N L ++P P + PV L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 280 APIVYNTLINAPGA-PKGKAATPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGP 338
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
CA + W+ L +RA+LK RQGV + V+ PET V D ++ GE++FR
Sbjct: 339 ASVCAEQPGWDDLPAEQRAQLKRRQGVPYPLQEAVTVLDPETMQEVPRDAETIGEVMFRG 398
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK++ + + WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EV
Sbjct: 399 NIVMKGYLKNEAATREAF-EGGWFHTGDLGVLDEFGYVIIKDRSKDIIISGGENISSVEV 457
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ A+VA+ D WG+ PCAFV LK S TE I+ +C++ LP + +
Sbjct: 458 EDVLYKHPAVLFAAVVAKPDPKWGEVPCAFVELKDGASA--TEAEILAYCKSVLPGFKSP 515
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAVN 439
K+V+ +PKT+TGKIQKF LR+ VN+
Sbjct: 516 KAVVF-GAIPKTSTGKIQKFALRDQVNSAK 544
>gi|218188156|gb|EEC70583.1| hypothetical protein OsI_01787 [Oryza sativa Indica Group]
Length = 606
Score = 367 bits (943), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 199/466 (42%), Positives = 277/466 (59%), Gaps = 46/466 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHD--DVSATSS 61
RLD +VLL HSE+K++FVD +A AL L + P VLI + D + S
Sbjct: 131 RLDAAMAAVLLRHSEAKVVFVDRALLGVAQKALVLVAEAGARRPVLVLISELLDENERSP 190
Query: 62 PTV---------------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCH 100
P P+F P E +P+ALNYTSGTTS PKGV++ H
Sbjct: 191 PDAKIKVTRVDYEYEHLLSAAAAGSSPDFAIRWPADENEPIALNYTSGTTSRPKGVIYSH 250
Query: 101 RGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYS 160
RG ++ +++++I + PV+LWT+PMFH NGW WG+AA GGTN+C+R+V I+
Sbjct: 251 RGAYLSSLAAVIVNAMAETPVYLWTVPMFHCNGWCQVWGVAAQGGTNVCVRRVTAAAIFD 310
Query: 161 VIKHHGVTHICGALVVLNMLSSSPSTK------PLDRPVKILTSGASPPAAVLLRTESLG 214
+ HGVTH+ GA VL+M+ ++ + + R V ++T GA PP VL R E G
Sbjct: 311 SVARHGVTHMGGAPTVLSMIVNATADERRRQPGGRRRRVTVMTGGAPPPPQVLFRMEEQG 370
Query: 215 FVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMS 274
F+V HSYGLTET G C WK +W+ L ERAR+K+RQG+ +GL DV P T S
Sbjct: 371 FLVIHSYGLTETYGPATVCTWKPEWDALTAEERARIKSRQGLHHVGLEAADVKDPATMRS 430
Query: 275 VKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSK 334
V DG++ GE++ R ++M GY KD G++ W +GD+ V DGY++I DRSK
Sbjct: 431 VPADGRTVGEVMLRGNTVMSGYYKDG-GATAEALAGGWLRSGDLAVREEDGYIKILDRSK 489
Query: 335 DVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA 394
D+IISGGENIS+ EVE+ L+ +PA+ E A+V + D++WG+R +E
Sbjct: 490 DIIISGGENISTVEVEAALFGHPAVEEAAVVGRPDEYWGERRA--------------QEE 535
Query: 395 IIEFCRARLPHYMAHKS-VIIEDELPKTATGKIQKFVLREIVNAVN 439
++ FCRARLP YMA ++ V++E+ELPKTATGK+QK LRE A+
Sbjct: 536 LMAFCRARLPRYMAPRTVVVVEEELPKTATGKVQKVALRERAKAMG 581
>gi|398936245|ref|ZP_10666913.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
gi|398168370|gb|EJM56390.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM41(2012)]
Length = 540
Score = 367 bits (942), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 193/449 (42%), Positives = 277/449 (61%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L H E+K+L D + + AA+ + L P L+ D
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHDVIHAAIGM------LDHPPLVIDVNDPEYGEGQ 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G P F W P +EW ++LNYTSGTT +PKGVV+ HRG ++ ++ +
Sbjct: 155 AVSDLDYEALLAEGDPAFAWQWPANEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ H VTH+C
Sbjct: 215 MTWAMGNHPVYLWTLPMFHCNGWCYPWIITAMAGVHVFLRRVDPQKILTLIREHQVTHLC 274
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
A +VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTET G
Sbjct: 275 AAPIVLNALVNMPESAKAAIDHPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTETYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW ++W+ L ERA++K+RQGVR L + V +T DGQ+ GEI R
Sbjct: 335 VTLCAWHAEWDELPLDERAQIKSRQGVRYPTLEGVMVGDSKTLEPTPRDGQTIGEIFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ ++ + WF+TGD+ V H +GY+EIKDR KD+IISGGENIS+ E+
Sbjct: 395 NTVMKGYLKNPTATAEAF-EGGWFHTGDLAVCHPNGYVEIKDRLKDIIISGGENISTIEL 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ E A+VA+ D+ WG+ PCAF++LK + + E II FCR L +
Sbjct: 454 EGVLYRHPAVMEAAVVARPDEKWGETPCAFITLKAD-HQDVREADIISFCREHLAGFKVP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
++VI LPKT+TGKIQK+VLR+ A+
Sbjct: 513 RTVIF-TLLPKTSTGKIQKYVLRDRAKAL 540
>gi|118588371|ref|ZP_01545780.1| acyl-CoA synthase [Stappia aggregata IAM 12614]
gi|118439077|gb|EAV45709.1| acyl-CoA synthase [Stappia aggregata IAM 12614]
Length = 546
Score = 367 bits (941), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 195/444 (43%), Positives = 279/444 (62%), Gaps = 14/444 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP--------SNTILPKPVLIHDDV 56
RLD ++ L H++ K+L D + +P+ ALS+ S+T P+ +
Sbjct: 107 RLDAAIIAFQLDHADCKVLITDREYAPVVKEALSMAAVTPIVIDFSDTQFPQDGERLGSL 166
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ G P F W P+ EWD +ALNYTSGTT +PKGVV+ HRG +++ +++I +
Sbjct: 167 DYEAFLQSGDPEFAWSLPDDEWDAIALNYTSGTTGNPKGVVYHHRGAYLLAQANVITASM 226
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
PV+LWTLPMFH NGW + W ++ V GT++CLR V ++ +I GVTH+CGA ++
Sbjct: 227 AKHPVYLWTLPMFHCNGWCFPWSLSLVAGTHVCLRWVRPQTMWELIAEEGVTHLCGAPII 286
Query: 177 LN-MLSSSPSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
++ +L+++P K LDR V+ T+ A PP +VL ++ GF V+H YGLTE G V
Sbjct: 287 MSTLLNAAPEHKRDLDREVEFFTAAAPPPESVLAAMKTAGFNVTHLYGLTEVYGPAVVND 346
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
WK +WN L E+A+ KARQGVR + L + V+ PET V DG++ GE++FR +M
Sbjct: 347 WKLEWNDLPLDEQAQKKARQGVRYVALEGLTVLDPETLEPVPADGETLGEVMFRGNVVMK 406
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ E + + WF++GD+GV+H DGY+++KDRSKD+IISGGENISS EVE VLY
Sbjct: 407 GYLKNPEATEKAFK-GGWFHSGDLGVLHPDGYVQLKDRSKDIIISGGENISSIEVEEVLY 465
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+ + A+VA+ D+ WG+ PCAFV LK +E +I FCR L + A K+++
Sbjct: 466 KHADVQAAAVVAKPDEKWGETPCAFVELK--EGSTVSEADLIAFCRQHLAGFKAPKTLVF 523
Query: 415 EDELPKTATGKIQKFVLREIVNAV 438
ELPKT+TGKIQKF LRE A+
Sbjct: 524 -CELPKTSTGKIQKFALREQAKAL 546
>gi|89092399|ref|ZP_01165353.1| probable AMP-binding enzyme [Neptuniibacter caesariensis]
gi|89083487|gb|EAR62705.1| probable AMP-binding enzyme [Oceanospirillum sp. MED92]
Length = 544
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 193/448 (43%), Positives = 273/448 (60%), Gaps = 23/448 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ +L H E++++ D + S + A+ + + P+L+ DD T
Sbjct: 106 RLDAETIAFMLDHGEARVVITDREFSNVMERAVRMASVD-----PLLVDVDDPQFTGGEL 160
Query: 64 VGHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G ++ W PE EW + LNYTSGTT +PKGVV+ HRG + S++I
Sbjct: 161 IGSLTYEQLLAEGDINDHWSPPEDEWQAITLNYTSGTTGNPKGVVYHHRGAHLNATSNII 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+P V+LWTLPMFH NGW Y W + AV GT++CLR + ++ +I+ GVTH CG
Sbjct: 221 GQNLPPHAVYLWTLPMFHCNGWCYPWSVTAVAGTHVCLRHLLPEKVFELIQACGVTHFCG 280
Query: 173 ALVVLNMLSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VVLNML ++P + D PV + T GA+PPAA++ E +G V H+YGLTE+ G
Sbjct: 281 APVVLNMLLNAPEESKMLVDHPVTVTTGGAAPPAAIIEGMEKIGIKVVHAYGLTESYGPS 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V CA + +W+ + ++A ARQGVR L + V PET V DG++ GE+ R
Sbjct: 341 VFCAHQDEWDQMVLEDKAAKMARQGVRAPALEQLMVGDPETMAPVPRDGKTMGEVFMRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ S WF++GD+ V H DGY+E+KDRSKDVIISGGENIS+ EVE
Sbjct: 401 NVMKGYLKNPSASDAAF-SGGWFHSGDLAVWHEDGYIEVKDRSKDVIISGGENISTIEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PAI E A+VA+ D+ WG+ PCAFV+LK + TE IIEF R+ + H+ K
Sbjct: 460 DMLYRHPAILEAAVVAKPDEHWGEVPCAFVTLK--DGQSATEAEIIEFTRSNMAHFKCPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
V+ LPKT+TGK+QKF LR ++ +
Sbjct: 518 KVVFA-PLPKTSTGKVQKFALRAMLKDI 544
>gi|406707605|ref|YP_006757957.1| AMP-binding protein [alpha proteobacterium HIMB59]
gi|406653381|gb|AFS48780.1| AMP-binding enzyme [alpha proteobacterium HIMB59]
Length = 541
Score = 366 bits (940), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 187/445 (42%), Positives = 285/445 (64%), Gaps = 21/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + V+ +L+HS+ K+ VD Q P+A AL + ++ + I D
Sbjct: 101 RLDVRTVAYILNHSDCKVFIVDRQFQPVAAEALLQVERDVVV---IDIDDQQAGLGDIPA 157
Query: 55 --DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D+ S G F+WV+P+ EW ++LNYTSGTT +PKGVV+ HRG +++++ S+
Sbjct: 158 IGDLEYESFLQTGDEGFEWVRPKDEWQAISLNYTSGTTGNPKGVVYHHRGSYLMSMGSVS 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +PN+ +L+T+PMFH NGW Y W +A + + +R + V I+ +I + VTH G
Sbjct: 218 AWNMPNRLTYLYTVPMFHCNGWGYPWTLAMLHARVVFIRNIIVKEIFELIDQYQVTHFGG 277
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNM++++P+ K L+ V ++T+GA PP+++LL+ ESLGF V H YGLTET G V
Sbjct: 278 APIVLNMIANAPAEDQKALNNKVYVMTAGAPPPSSILLKMESLGFEVMHVYGLTETYGHV 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V CAW WN L + +R+ K+ QGVR + V+ P+T V DG + GEI+ R
Sbjct: 338 VHCAWNEDWNDLPEEQRSDRKSYQGVRYPHTEVVAVMDPDTLKPVPADGSTMGEIMIRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GY K+++ + M+D WF++GD+ V+H +GY+++KDRSKD+IISGGENISS E+E
Sbjct: 398 TVMKGYYKNEDATKEVMKDG-WFHSGDLAVIHPNGYIQVKDRSKDIIISGGENISSVEIE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+++ +PA++ A+VA+ D+ WG+ PCAF+ L ++ EE + +FCR L + K
Sbjct: 457 NIVTKHPAVSLAAVVARPDEKWGETPCAFIELV--EGQQVEEEELKKFCREHLAGFKMPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLREIV 435
+ + + LPKT+TGKIQKF LRE V
Sbjct: 515 TFVFQ-TLPKTSTGKIQKFELREAV 538
>gi|414171951|ref|ZP_11426862.1| hypothetical protein HMPREF9695_00508 [Afipia broomeae ATCC 49717]
gi|410893626|gb|EKS41416.1| hypothetical protein HMPREF9695_00508 [Afipia broomeae ATCC 49717]
Length = 549
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 274/447 (61%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H +K++ VD + S + AL L PKP++I DD +
Sbjct: 105 RLDAASIAFQLDHGGAKIILVDPEFSGVISDALGLMKG----PKPLVIDVDDAAFAGGKR 160
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P+F W QP+ EWD +AL YTSGTT +PKGVV +RG ++ VS+++
Sbjct: 161 IGEIEYEAAVASGDPDFAWHQPQDEWDAIALGYTSGTTGNPKGVVTHYRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ P++LWTLPMFH NGW + W +A G N+CLRKVD I+ +IK HGVTH+CG
Sbjct: 221 AGNLGTHPIYLWTLPMFHCNGWCFPWTIAVSAGINVCLRKVDPAKIFELIKAHGVTHMCG 280
Query: 173 ALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P +PV L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 281 APIVYNTLINAPDAPKGSAAKPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L +RA+LK RQGV + V+ P+T V DG++ GE++ R
Sbjct: 341 SVCAEQPGWDDLPADQRAQLKRRQGVPYPLEEAVTVLDPDTMQPVPRDGETIGEVMIRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYL +++ + + WF+TGD+GV+ DGY+ IKDRSKD+IISGGENISS EVE
Sbjct: 401 IVMKGYLNNEKATKEAF-EGGWFHTGDLGVLDKDGYVIIKDRSKDIIISGGENISSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ A+VA+ D WG+ PCAFV LK + TE I+ +C++ LP + + K
Sbjct: 460 DVLYKHPAVLFAAVVAKPDPKWGEVPCAFVELKDGATA--TEAEILSYCKSILPGFKSPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
SV+ +PKT+TGKIQKF LR+ N+
Sbjct: 518 SVVF-GAIPKTSTGKIQKFALRDQANS 543
>gi|359427997|ref|ZP_09219040.1| putative fatty-acid--CoA ligase [Acinetobacter sp. NBRC 100985]
gi|358236659|dbj|GAB00579.1| putative fatty-acid--CoA ligase [Acinetobacter sp. NBRC 100985]
Length = 547
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 279/442 (63%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + +A AL+L I+ + + D +
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFRAIAEEALTLVTRQIIV---IDVFDQEYEGEQIAL 157
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +P F W+ P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ S+++
Sbjct: 158 GQYEYESWLAEGNPEFDWLLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNILA 217
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLP+FH NGW ++W +AA GGTNICLR+VD +I+ I H V + CGA
Sbjct: 218 CGMKPRAVYLWTLPLFHCNGWCFAWSIAASGGTNICLRRVDPALIFKYIAEHKVDYFCGA 277
Query: 174 LVVLNMLSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+ML ++P + + + V+++ +GA+PP A++ ++G V+H YGLTET G
Sbjct: 278 PIVLSMLINAPQEQKIAFEHHVEVMVAGAAPPVAIIEGMRNIGINVNHVYGLTETYGPSA 337
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L+ E+A+L +RQGV M V+ PET V +DG++ GEI+FR
Sbjct: 338 LCASQAGWSDLSIQEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGETMGEIMFRGNI 397
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + + WF+TGD+ V H DGY +I DRSKD+IISGGENISS EVE
Sbjct: 398 VMKGYLKNPQATEDAFK-GGWFHTGDLAVCHPDGYAKITDRSKDIIISGGENISSLEVED 456
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VA+ D+ W + PCAF+ LK S + E II C+ L + K
Sbjct: 457 VLYRHPAVLTAAVVAKPDERWQEVPCAFIELKQGASA--SSEEIIAHCQKELARFKVPKD 514
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
++I E+PKT+TGK+QKF+LRE
Sbjct: 515 IVI-TEIPKTSTGKLQKFILRE 535
>gi|347535080|ref|YP_004842505.1| putative AMP-dependent synthetase and ligase [Flavobacterium
branchiophilum FL-15]
gi|345528238|emb|CCB68268.1| Protein of unknown function. Putative AMP-dependent synthetase and
ligase [Flavobacterium branchiophilum FL-15]
Length = 543
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 197/440 (44%), Positives = 284/440 (64%), Gaps = 19/440 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + +L H+ +K+L D + S L A++ P + I D
Sbjct: 104 RLDAATIGFMLEHAGTKVLITDIEFSATILEAIACLEDP---PLIINIEDEHAEGGSLIG 160
Query: 55 DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
D++ + G F+W P SEW ++LNYTSGTT +PKGVV+ HRG ++ +++I W
Sbjct: 161 DLTYENFIARGDDVFEWELPSSEWQAISLNYTSGTTGNPKGVVYHHRGAYLNAANNIITW 220
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P V+LWTLPMFH NGW + W +AA GT+IC+RKV +I+ I++ VTH CGA
Sbjct: 221 SMPQHAVYLWTLPMFHCNGWCFPWTLAAQAGTSICIRKVKADVIFEAIENEKVTHFCGAP 280
Query: 175 VVLNMLS--SSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VL +L+ S KPL V ++T+GA+PPAA++ E++GF ++H YGLTET G V
Sbjct: 281 IVLGLLTNASEADKKPLQNTVYVMTAGAAPPAAIIEGVEAMGFKITHVYGLTETYGPAVV 340
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW+S+W+ L +E+A LKARQGV+ + L D+ V +P+T V DG + GEI + +
Sbjct: 341 CAWQSEWDDLPISEKADLKARQGVKYLFLEDVMVANPDTLEPVPADGTTIGEIFIKGNIV 400
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK++ + WF+TGD+ V ++DGY++IKDRSKD+IISGGENIS+ EVESV
Sbjct: 401 MKGYLKNEPATQEAFA-GGWFHTGDLAVWYADGYVQIKDRSKDIIISGGENISTIEVESV 459
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D+ WG+ CAF++LK ++ TE +I++C+ L + K+V
Sbjct: 460 LYRHPAVLEAAVVARPDQKWGETVCAFITLK--PNQLLTELEVIQYCKQHLAGFKTPKTV 517
Query: 413 IIEDELPKTATGKIQKFVLR 432
I ELPKT+TGKIQK+VLR
Sbjct: 518 IF-SELPKTSTGKIQKYVLR 536
>gi|254451067|ref|ZP_05064504.1| acyl-CoA synthase [Octadecabacter arcticus 238]
gi|198265473|gb|EDY89743.1| acyl-CoA synthase [Octadecabacter arcticus 238]
Length = 477
Score = 366 bits (939), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 194/443 (43%), Positives = 280/443 (63%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPK------------PVLI 52
RLD ++ +L H E+K+L VD + S +A A++ + ++ L
Sbjct: 42 RLDVGTIAYILEHGEAKVLLVDTEFSAMAAEAVAQSGRDVLVVDIEDSEGPGGDRIGTLT 101
Query: 53 HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+DD+ + G P+F + P+ EWD +ALNYTSGTT PKGVV+ HRG + V++++
Sbjct: 102 YDDLLSE-----GDPDFAYTLPDDEWDALALNYTSGTTGRPKGVVYSHRGAWTNAVNNVV 156
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P+ PV+LWTLP+FH NGW + W + + GT++ LR +IY HGVTH+CG
Sbjct: 157 TWAMPHHPVYLWTLPLFHCNGWCFPWTITMLAGTHVFLRAPRADVIYDAFADHGVTHLCG 216
Query: 173 ALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
A ++++M+S + + + +K++T+ A PPA+V+ E++G ++H YGLTE G V
Sbjct: 217 APIIMSMISDAEEKRGFPQKIKMMTAAAPPPASVIKGMEAMGISITHVYGLTEVYGPAVV 276
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA K W L ++A +KARQGV D+ V+ PETG V +G++ GE+VFR +
Sbjct: 277 CAEKPGWAALPAEQQAEMKARQGVAYELEEDVLVLDPETGTPVPWNGKTLGEVVFRGNIV 336
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK E ++ +D WF++GDI V H+DGY+EI+DRSKD+IISGGENISS EVE
Sbjct: 337 MKGYLKAPEETAKAFKDG-WFWSGDIAVQHADGYIEIRDRSKDIIISGGENISSIEVEKA 395
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA++ VA+VA D+ WG+ PCAFV ELS + TEE ++ +ARL YM K V
Sbjct: 396 LYSHPAVSVVAVVAMPDEKWGEVPCAFV----ELSGEVTEEELLAHAKARLAGYMRPKKV 451
Query: 413 IIEDELPKTATGKIQKFVLREIV 435
I ELPKT TGKI+K LR++V
Sbjct: 452 IF-GELPKTTTGKIRKNELRDLV 473
>gi|407364898|ref|ZP_11111430.1| acyl-CoA synthetase [Pseudomonas mandelii JR-1]
Length = 540
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/449 (42%), Positives = 278/449 (61%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD + ++ +L H E+K+L D + + AA+ + L P L+ D
Sbjct: 101 RLDAEAIAFMLQHGEAKVLITDREFHDVIHAAIGM------LDHPPLVIDVNDPEYGEGK 154
Query: 55 ---DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D+ + G P++ W P++EW ++LNYTSGTT +PKGVV+ HRG ++ ++ +
Sbjct: 155 AVSDLDYEALLAEGDPDYAWQWPDNEWQAISLNYTSGTTGNPKGVVYHHRGAYLNSLGNQ 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ H +TH+C
Sbjct: 215 MTWAMGNHPVYLWTLPMFHCNGWCYPWIITAMAGVHVFLRRVDPQKILTLIREHQITHLC 274
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
A +VLN L + P + +D PV + +GA+PPA V+ E +G V+H YGLTET G
Sbjct: 275 AAPIVLNALVNMPESAKAAIDHPVNAMVAGAAPPAKVIGAVEEMGIKVTHVYGLTETYGP 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW ++W+ L ERA++K+RQGVR L + V +T DGQ+ GEI R
Sbjct: 335 VTLCAWHAEWDELPLDERAQIKSRQGVRYPTLEGVMVGDSKTLEPTPRDGQTIGEIFMRG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ ++ + WF+TGD+ V H +GY+EIKDR KD+IISGGENIS+ E+
Sbjct: 395 NTVMKGYLKNPTATAEAF-EGGWFHTGDLAVCHPNGYVEIKDRLKDIIISGGENISTIEL 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +P + E A+VA+ D+ WG+ PCAF++LK + + E II FCR L +
Sbjct: 454 EGVLYRHPGVMEAAVVARPDEKWGETPCAFITLKAD-HQDVREADIISFCREHLAGFKVP 512
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
++VI LPKT+TGKIQK+VLR+ A+
Sbjct: 513 RTVIFT-LLPKTSTGKIQKYVLRDRAKAL 540
>gi|241661643|ref|YP_002980003.1| acyl-CoA synthetase [Ralstonia pickettii 12D]
gi|240863670|gb|ACS61331.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12D]
Length = 544
Score = 365 bits (938), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 195/443 (44%), Positives = 270/443 (60%), Gaps = 12/443 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA------LAALSLFPSNTILPKPVLIHDDVSA 58
RLD + +L H E+++L D + + LA + L + N L D
Sbjct: 102 RLDAANLVFMLRHGEARVLLADTEFAELARQMALEIPGLKVIAVNDALGPQAEPFGDTDY 161
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
S G P++ W P EWD +ALNYTSGTT PKGVV+ HRG I VS++++W +P
Sbjct: 162 ESFLASGDPHYDWQMPADEWDAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPK 221
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
PV+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ GVTH C A +V
Sbjct: 222 HPVYLWTLPMFHCNGWCFPWTIAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHT 281
Query: 179 MLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
L ++P + + L PV+ + +GA PPAAVL + E++GF ++H YGLTE G CA +
Sbjct: 282 ALVNAPPSWREGLRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQ 341
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
+W TL + +RA +KARQGVR + + V++PET V DG++ GEI+FR M GY
Sbjct: 342 DEWRTLPEHDRATMKARQGVRYHLQSQVAVLNPETMQPVPADGETIGEIMFRGNICMKGY 401
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
LK+++ + WF+TGD+GV DGY++IKDRSKD+IISGGENISS EVE LY +
Sbjct: 402 LKNEKATREAFA-GGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRH 460
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
PA+ A+VAQ D WG+ PCAFV LK T E +I C+ L + K+V
Sbjct: 461 PAVLAAAVVAQPDAKWGETPCAFVELK--DGATATAEDLIAHCKTLLAGFKVPKAVFF-G 517
Query: 417 ELPKTATGKIQKFVLREIVNAVN 439
LPKT+TGKIQK+ LR V + +
Sbjct: 518 PLPKTSTGKIQKYELRRKVKSTS 540
>gi|300313986|ref|YP_003778078.1| acyl-CoA synthetase/AMP-acid ligase II protein [Herbaspirillum
seropedicae SmR1]
gi|300076771|gb|ADJ66170.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II protein
[Herbaspirillum seropedicae SmR1]
Length = 546
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 274/442 (61%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPV----LIH 53
RLD + + +L H E+K+L +D + + LA + P+ I+ P PV H
Sbjct: 101 RLDAESIVFMLRHGEAKVLLIDSEFAALAQQLRTQLPALKIVEVFDELGPPPVAGERFGH 160
Query: 54 DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
+ A + G +F W P EWD +ALNYTSGTT PKGVV+ HRG + VS++++
Sbjct: 161 LEYEALLAG--GDEHFDWQMPADEWDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILE 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P PV+LWTLPMFH NGW + W +AA G N+CLRK + +++ +I HG+TH C A
Sbjct: 219 WDLPKHPVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFEPKLVFDLIAEHGITHYCAA 278
Query: 174 LVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V L+++P + PVK + +GA PPAAVL + E++ F ++H YGLTE G
Sbjct: 279 PIVHAALANAPEGWRAGIRGPVKAMVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA + +WNTL+ +RA K+RQGVR + + V+ P+T V DG+ GEI+FR
Sbjct: 339 VCAEQDEWNTLSVDQRAVQKSRQGVRYHLQSGVTVLSPDTMAPVAADGEEIGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
M GYLK+ + WF+TGD+GV+++DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 399 CMKGYLKNDRATHEAFA-GGWFHTGDLGVMNADGYIKIKDRSKDIIISGGENISSVEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VAQ D+ WG+ PCAFV LK E + EFCR+ L + K+
Sbjct: 458 VLYRHPAVLAAAVVAQPDEKWGETPCAFVELKEGAEVGAAE--LTEFCRSHLAGFKVPKA 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
+ LPKT+TGKIQKF LR+
Sbjct: 516 IYF-GPLPKTSTGKIQKFELRK 536
>gi|351731437|ref|ZP_08949128.1| AMP-dependent synthetase and ligase [Acidovorax radicis N35]
Length = 552
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/450 (42%), Positives = 272/450 (60%), Gaps = 22/450 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K + VD + + AL++ T + + + + D + ++ ++
Sbjct: 102 RLDPEAIAFMLDHGEAKAVIVDPEFTGTMAKALAVRTGTTPI-RVIEVQDALYGPAAQSL 160
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W P+ EWD +ALNYTSGTT +PKGVV+ HRG +S++++
Sbjct: 161 GGTDYEAFVAMGDPTFAWRLPDDEWDAIALNYTSGTTGNPKGVVYHHRGAASNAISNVLE 220
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P V+LWTLPMFH NGW + W +AA G N+CLR+VD I+ I+ HGVTH CGA
Sbjct: 221 WDMPKHAVYLWTLPMFHCNGWCFPWTIAARAGVNVCLRRVDAQAIFDAIRQHGVTHYCGA 280
Query: 174 LVVLNMLSSSPSTKP------LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
+V +L ++P VK + +GA+PPA+++ E +GF ++H YGLTE
Sbjct: 281 PIVHGLLVNAPDAMKSGVQSLAQGGVKAMVAGAAPPASMIEGMEKMGFDLTHVYGLTEVY 340
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G CA W+ L ERARL ARQGVR D+ V+ PET + V DG++ GEI+F
Sbjct: 341 GPATVCAKHEAWDALDIGERARLNARQGVRYHLERDVRVLDPETMLPVPQDGETMGEIMF 400
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
+ M GYLK+ + + WF++GD+ V + DGY++IKDRSKD+IISGGENISS
Sbjct: 401 KGNIAMKGYLKNPKATDEAFA-GGWFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSI 459
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE VLY +P + A+VA+ D WG+ PCAFV LK T E I+ C+ L +
Sbjct: 460 EVEDVLYRHPDVLAAAVVAKPDAKWGETPCAFVELK--AGATATAEDIVAHCKKHLAGFK 517
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREIVNA 437
++V+ D LPKT+TGKIQKF LR++ +
Sbjct: 518 VPRAVVFGD-LPKTSTGKIQKFELRKLAGS 546
>gi|409408477|ref|ZP_11256912.1| acyl-CoA synthetase/AMP-acid ligase II protein [Herbaspirillum sp.
GW103]
gi|386431799|gb|EIJ44627.1| acyl-CoA synthetase/AMP-acid ligase II protein [Herbaspirillum sp.
GW103]
Length = 546
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 276/442 (62%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPV----LIH 53
RLD + + +L H E+K+L +D + + LA + P+ I+ P PV H
Sbjct: 101 RLDAESIVFMLRHGEAKVLLIDSEFAALAQQLRAQLPALKIVEVFDVLGPPPVPGERFGH 160
Query: 54 DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
+ A + G NF+W P EWD +ALNYTSGTT PKGVV+ HRG + VS++++
Sbjct: 161 LEYEALLAD--GDENFEWQWPADEWDAIALNYTSGTTGDPKGVVYHHRGAALNAVSNILE 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P PV+LWTLPMFH NGW + W +AA G N+CLRK + +++ +I HG+TH C A
Sbjct: 219 WDLPKHPVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFEPKLVFDLIAEHGITHYCAA 278
Query: 174 LVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V L+++P + PVK + +GA PPAAVL + E++ F ++H YGLTE G
Sbjct: 279 PIVHAALANAPEGWRANIRGPVKAMVAGAPPPAAVLAKMEAMQFELTHVYGLTEVYGPAA 338
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA + +W+TL+ +RA K+RQGVR + + V+ P+T V DG+ GEI+FR
Sbjct: 339 VCAEQDEWSTLSVDQRAVQKSRQGVRYHLQSGVTVLSPDTMEPVAADGEEIGEIMFRGNI 398
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
M GYLK+ + + WF+TGD+GV+++DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 399 CMKGYLKNDKATHEAFA-GGWFHTGDLGVMNADGYIKIKDRSKDIIISGGENISSVEVED 457
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VAQ D+ WG+ PCAFV LK + E + EFCR L + K+
Sbjct: 458 VLYRHPAVLAAAVVAQPDEKWGETPCAFVELKEGANIDAAE--LTEFCRGHLAGFKVPKA 515
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
+ LPKT+TGKIQKF LR+
Sbjct: 516 IYF-GPLPKTSTGKIQKFELRK 536
>gi|406705604|ref|YP_006755957.1| AMP-binding protein [alpha proteobacterium HIMB5]
gi|406651380|gb|AFS46780.1| AMP-binding enzyme [alpha proteobacterium HIMB5]
Length = 538
Score = 365 bits (937), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 187/443 (42%), Positives = 270/443 (60%), Gaps = 21/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS---- 60
RLD K V +L HSE+K+ VD Q + + + I+ + I DD + S
Sbjct: 101 RLDAKTVQYILEHSEAKVFIVDRQFHSVISKVMEQLKNKPII---IDIQDDFADQSLLKK 157
Query: 61 --------SPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G N+ W +P+ EW ++LNYTSGTT +PKGVV+ HRG ++++ S +
Sbjct: 158 IGEHEYEDFLNTGDDNYIWKRPKDEWQAISLNYTSGTTGNPKGVVYHHRGSYLMSTGSAV 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +PN+ FL +PMFH NGW Y W + + G +CLR +DV I+ +I H VTH G
Sbjct: 218 AWNMPNRLSFLTIVPMFHCNGWGYPWTIPMLNGKTVCLRNIDVKKIFELIIKHKVTHFGG 277
Query: 173 ALVVLNMLS--SSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNM++ S K L+ V +LT+GA PP+ + + E+LGF V H YGLTET G V
Sbjct: 278 APIVLNMITGASEKDRKKLEHKVYVLTAGAPPPSIIFKKMEALGFEVMHVYGLTETYGHV 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAW +WN+L + ++ +KARQGVR D+ V++PE V DG++ GEI+ R
Sbjct: 338 SQCAWNDEWNSLDEDKKNEIKARQGVRYPNTEDIKVMNPENMEPVPQDGKTMGEIMIRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GY KD+ + M + WF++GD+ V H DGY++I+DRSKD+IISGGENISS E+E
Sbjct: 398 VVMKGYFKDKAATDKAM-NGGWFHSGDLAVAHPDGYIKIQDRSKDIIISGGENISSIEIE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+ L +PA++ A+VA+ D+ WG+ P AF+ + K T++ +++FCR L + K
Sbjct: 457 NTLSKHPAVSIAAVVAKPDEKWGEVPAAFIEKVKD--KDVTDKELMDFCRETLAGFKIPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+ ELPKT+TGKIQKF LR+
Sbjct: 515 YIEF-CELPKTSTGKIQKFELRK 536
>gi|99081011|ref|YP_613165.1| acyl-CoA synthetase [Ruegeria sp. TM1040]
gi|99037291|gb|ABF63903.1| AMP-dependent synthetase and ligase [Ruegeria sp. TM1040]
Length = 543
Score = 365 bits (936), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 190/439 (43%), Positives = 279/439 (63%), Gaps = 14/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL---ALAALSLFPSNTILPKPV-----LIHDDV 56
RLD ++ L H+ SK++ VD + PL ALA S+ P + PV + + V
Sbjct: 103 RLDAAIIAFQLDHAMSKVVIVDSEFMPLMQEALALCSVQPLLIEVDDPVYEGARIKTEAV 162
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
S G F W+ PE EWD +++NYTSGTT PKGVV HRG +++ + + +
Sbjct: 163 DYDSFIADGDAEFAWLMPEDEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNALTTTM 222
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
V+LWTLPMFH NGW + W ++A+ GT++CLR+V I++ + GVTH+CGA +V
Sbjct: 223 GKHAVYLWTLPMFHCNGWCFPWTLSAIIGTHVCLRQVRADQIWNALADEGVTHLCGAPIV 282
Query: 177 LNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
++++ S+P+ +PLD+ V+ T+ A PP +L ++ GF V+H YGLTET G V
Sbjct: 283 MSLMISAPADVQRPLDQTVQFFTAAAPPPEKLLADMKTAGFEVTHLYGLTETYGPAVVND 342
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W W+ L E++RLK+RQGVR + L ++V+ PET V HDG++ GE++FR +M
Sbjct: 343 WHQSWSELPHDEQSRLKSRQGVRYLPLEGLNVLDPETLEPVPHDGETMGEVMFRGNVVMK 402
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GY ++ + + + WF++GD+GVVH DGY+++KDRSKDVIISGGENISS EVE LY
Sbjct: 403 GYFRNPDATRKAF-EGGWFHSGDLGVVHPDGYIQLKDRSKDVIISGGENISSIEVEEALY 461
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PAI A+VA D+ WG+ PCAF+ L E ++ T +A+ ++CR +L Y + ++
Sbjct: 462 RHPAIAVTAVVAMPDEKWGETPCAFIELA-EGAEIDT-DALRQWCRDQLAPYKVPRKFVL 519
Query: 415 EDELPKTATGKIQKFVLRE 433
E+P+T+TGKIQKF LRE
Sbjct: 520 T-EIPRTSTGKIQKFALRE 537
>gi|398892500|ref|ZP_10645586.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
gi|398185369|gb|EJM72776.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Pseudomonas
sp. GM55]
Length = 550
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 191/443 (43%), Positives = 279/443 (62%), Gaps = 21/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RL+ K ++ +L HS +K+L D + S +A AL+ + +P++I DDV +
Sbjct: 103 RLEAKTIAFILRHSAAKVLICDREFSAIARQALAALET-----RPLVIDIDDVQVRDAEL 157
Query: 64 VGHPNFKWVQ-----------PESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G +++ PE+EW +A+NYTSGTT PKGVV HRG ++ + +
Sbjct: 158 IGELDYEAFLDQGDPMRSLSLPENEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGAL 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+++ ++ V+LWTLPMFH NGWS++W + GGT+ICLRKV +I++ I HGVTH+
Sbjct: 218 IFQLSSRSVYLWTLPMFHCNGWSHTWAVTLSGGTHICLRKVQADLIHAAIAKHGVTHMSA 277
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VV++ML + P + ++PV ++T GA+PP+AV+ E+ GF ++H+YG+TE+ G
Sbjct: 278 APVVMSMLIHAEEPCERRANQPVAVITGGAAPPSAVIAAMEARGFNITHAYGMTESYGPS 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C W+ + L RA+ +RQGV L D V+ +TG V DG S GE+V R
Sbjct: 338 TLCLWQPGLDELPLEARAQFMSRQGVAHPMLEDATVLDTDTGQPVPADGASLGELVVRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYL + E + D W +TGD+ V+H DGY+EIKDRSKD+IISGGENISS E+E
Sbjct: 398 TVMKGYLNNPEETRAAFADG-WLHTGDLAVLHPDGYVEIKDRSKDIIISGGENISSLEIE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P + E A+VA+ D WG+ P AFV+L+ + + + +I +CR RL H+ A +
Sbjct: 457 EVLYQHPGVIEAAVVARPDSRWGETPHAFVTLRADALTNTSGDDLILWCRERLAHFKAPR 516
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V + ELPKTATGKIQKFVLRE
Sbjct: 517 HVSLV-ELPKTATGKIQKFVLRE 538
>gi|365896698|ref|ZP_09434760.1| putative AMP-binding enzyme [Bradyrhizobium sp. STM 3843]
gi|365422552|emb|CCE07302.1| putative AMP-binding enzyme [Bradyrhizobium sp. STM 3843]
Length = 547
Score = 364 bits (935), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 193/447 (43%), Positives = 278/447 (62%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA------ 58
RLD ++ L H +K++ VD + S + AL L PKP +I D +A
Sbjct: 103 RLDAPSIAFQLDHGGAKIILVDPEFSGVITEALKLMTG----PKPFVIDVDDAAFKGGSR 158
Query: 59 ------TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ +G P F+ +P EWD +AL+YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 159 IGEIEYEAALALGDPAFEPRRPNDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W +AA G N+CLRKV+ I+ +I+ HGVTH+CG
Sbjct: 219 AGNLGQHPVYLWTLPMFHCNGWCFPWTIAAAAGINVCLRKVEPTKIFELIREHGVTHMCG 278
Query: 173 ALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N+L ++P ++PV L +GA+PP AVL E++G ++H YGLTE G
Sbjct: 279 APIVYNVLINAPDAPKGKREKPVVGLIAGAAPPVAVLEGAENIGIKLTHVYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L+ ERAR+K RQGV + V+ PET V DG++ GE++FR
Sbjct: 339 SVCAEQPGWDDLSAAERARMKRRQGVPYPLEEAVTVLDPETMREVPRDGETIGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ ++ WF+TGD+GV+ + GY+ IKDRSKD+IISGGEN+SS EVE
Sbjct: 399 IVMKGYLKNEKATTEAFA-GGWFHTGDLGVLDAHGYVIIKDRSKDIIISGGENVSSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAF+ LK + TE II +CR R+ + K
Sbjct: 458 DILYKHPAVLFAAVVAKPDPKWGEVPCAFIELKE--GAEATEAEIIAYCRERMSGFKTPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
V++ +PKT+TGKIQK++LR V +
Sbjct: 516 -VVVFGPIPKTSTGKIQKYLLRNEVQS 541
>gi|420247111|ref|ZP_14750529.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. BT03]
gi|398072425|gb|EJL63644.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. BT03]
Length = 550
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 268/442 (60%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL----PKPVLIHDDVSATS 60
RLD + +L H E+K L VD + L L A FP I+ +P +AT
Sbjct: 102 RLDAASILYMLRHGEAKALIVDSEYGELGLRAAREFPQLRIISVSDAQPADTRHFPNATD 161
Query: 61 SPT---VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G F W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFLQAGDSQFAWTPPADEWDAIALNYTSGTTGEPKGVVYHHRGAYLNALSNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLP+FH NGW + W +AA G N+CLRK D +++ +I+ +TH CGA +V
Sbjct: 222 KHAVYLWTLPLFHCNGWCFPWTVAARAGVNVCLRKFDPKLVFDLIRRERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ L+++P+ + V + +GA+P AV+ R +S+GF ++H YGLTE G CA
Sbjct: 282 SALANAPAEWRDGIAHRVSTMVAGAAPSPAVIARMKSIGFDLTHVYGLTEVYGPASVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ W+ L D ERARL ARQGVR A +DV+ P+T V DG++ GE++FR M G
Sbjct: 342 QDAWDALDDDERARLNARQGVRYHLQAAVDVLDPDTLEPVPRDGETIGELMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK++ + R WF+TGD+GV+ +DGY+ IKDRSKD+IISGGENISS E+E LY
Sbjct: 402 YLKNERATEAAFR-GGWFHTGDLGVITADGYVRIKDRSKDIIISGGENISSIEIEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA++ A+VA D WG+ PCAFV LK + E II CR L + K+V
Sbjct: 461 HPAVSVAAVVAMPDAKWGEVPCAFVELK--DGADASAEEIISHCRQLLAGFKLPKAVFF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFELRARVKS 539
>gi|323136139|ref|ZP_08071221.1| AMP-dependent synthetase and ligase [Methylocystis sp. ATCC 49242]
gi|322398213|gb|EFY00733.1| AMP-dependent synthetase and ligase [Methylocystis sp. ATCC 49242]
Length = 552
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 190/444 (42%), Positives = 271/444 (61%), Gaps = 24/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD ++ L H+E++ L VD + S + AL+L + KP++I D + P
Sbjct: 103 RLDAAILAFTLDHAEARALIVDREFSGVIREALALAKT-----KPLIIDYDDPVYTGPGE 157
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G PN+ W P EWD ++LNYTSGTT PKGVV+ HRG +++ + ++
Sbjct: 158 RLGSIDYEDFILSGDPNYDWKPPRDEWDAISLNYTSGTTGDPKGVVYHHRGAYLLALGNV 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ + PV+LWTLPMFH NGW + W ++ GT++CLR+V +Y ++ HGVTH+C
Sbjct: 218 LTGNMGQHPVYLWTLPMFHCNGWCFPWSLSVAAGTHVCLRQVRAGHMYELMAEHGVTHLC 277
Query: 172 GALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V++ L +S KPL + T+ A PP AVL ++ GF V+H YGLTET G
Sbjct: 278 GAPIVMSTLLGASESEKKPLSVTARFFTAAAPPPQAVLAAMKAAGFEVTHLYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
W+ W+ L D +A++KARQGVR L +DV+ PET V DG + GE++FR
Sbjct: 338 AAVNEWQEAWDELDDAGQAQMKARQGVRYQVLDAIDVIDPETMQPVPRDGATMGEVMFRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ S WF++GD+GV+H DGY+++KDRSKD+IISGGENISS EV
Sbjct: 398 NIVMKGYLKNPSASENAFH-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VL+ +P ++ A+VA D WG+ PCAFV LK + T + +I + R L H+
Sbjct: 457 EDVLFKHPKVSAAAVVAAPDDKWGETPCAFVELK--AGAEATADELIAWSRTHLAHFKCP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
+ ++ ELPKT+TGKI+K+VLRE
Sbjct: 515 RHIVF-CELPKTSTGKIRKYVLRE 537
>gi|404394760|ref|ZP_10986563.1| hypothetical protein HMPREF0989_02975 [Ralstonia sp. 5_2_56FAA]
gi|348613825|gb|EGY63394.1| hypothetical protein HMPREF0989_02975 [Ralstonia sp. 5_2_56FAA]
Length = 562
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 194/443 (43%), Positives = 270/443 (60%), Gaps = 12/443 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA------LAALSLFPSNTILPKPVLIHDDVSA 58
RLD + +L H E+++L D + + LA + L + N L D
Sbjct: 120 RLDAANLVFMLRHGEARVLLADTEFADLARQMALEIPGLKVIAVNDALGPQAEPFGDTDY 179
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
+ G P++ W P EWD +ALNYTSGTT PKGVV+ HRG I VS++++W +P
Sbjct: 180 ETFLASGDPHYAWQLPADEWDAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPK 239
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
PV+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ GVTH C A +V
Sbjct: 240 HPVYLWTLPMFHCNGWCFPWTIAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHT 299
Query: 179 MLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
L ++P + + L PV+ + +GA PPAAVL + E++GF ++H YGLTE G CA +
Sbjct: 300 ALVNAPPSWREGLRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQ 359
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
+W TL + +RA +KARQGVR + + V++PET V DG++ GEI+FR M GY
Sbjct: 360 DEWRTLPEHDRATMKARQGVRYHLQSQVAVLNPETMQPVPADGETIGEIMFRGNICMKGY 419
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
LK+++ + WF+TGD+GV DGY++IKDRSKD+IISGGENISS EVE LY +
Sbjct: 420 LKNEKATREAFA-GGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRH 478
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
PA+ A+VAQ D WG+ PCAFV LK T E +I C+ L + K+V
Sbjct: 479 PAVLAAAVVAQPDAKWGETPCAFVELK--DGATATAEDLIAHCKTLLAGFKVPKAVFF-G 535
Query: 417 ELPKTATGKIQKFVLREIVNAVN 439
LPKT+TGKIQK+ LR V + +
Sbjct: 536 PLPKTSTGKIQKYELRRKVKSTS 558
>gi|187927134|ref|YP_001897621.1| acyl-CoA synthetase [Ralstonia pickettii 12J]
gi|309780163|ref|ZP_07674914.1| AMP-binding protein [Ralstonia sp. 5_7_47FAA]
gi|187724024|gb|ACD25189.1| AMP-dependent synthetase and ligase [Ralstonia pickettii 12J]
gi|308920866|gb|EFP66512.1| AMP-binding protein [Ralstonia sp. 5_7_47FAA]
Length = 544
Score = 363 bits (933), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 194/443 (43%), Positives = 270/443 (60%), Gaps = 12/443 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA------LAALSLFPSNTILPKPVLIHDDVSA 58
RLD + +L H E+++L D + + LA + L + N L D
Sbjct: 102 RLDAANLVFMLRHGEARVLLADTEFADLARQMALEIPGLKVIAVNDALGPQAEPFGDTDY 161
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
+ G P++ W P EWD +ALNYTSGTT PKGVV+ HRG I VS++++W +P
Sbjct: 162 ETFLASGDPHYAWQLPADEWDAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEWDLPK 221
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
PV+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ GVTH C A +V
Sbjct: 222 HPVYLWTLPMFHCNGWCFPWTIAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHT 281
Query: 179 MLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
L ++P + + L PV+ + +GA PPAAVL + E++GF ++H YGLTE G CA +
Sbjct: 282 ALVNAPPSWREGLRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQ 341
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
+W TL + +RA +KARQGVR + + V++PET V DG++ GEI+FR M GY
Sbjct: 342 DEWRTLPEHDRATMKARQGVRYHLQSQVAVLNPETMQPVPADGETIGEIMFRGNICMKGY 401
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
LK+++ + WF+TGD+GV DGY++IKDRSKD+IISGGENISS EVE LY +
Sbjct: 402 LKNEKATREAFA-GGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRH 460
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
PA+ A+VAQ D WG+ PCAFV LK T E +I C+ L + K+V
Sbjct: 461 PAVLAAAVVAQPDAKWGETPCAFVELK--DGATATAEDLIAHCKTLLAGFKVPKAVFF-G 517
Query: 417 ELPKTATGKIQKFVLREIVNAVN 439
LPKT+TGKIQK+ LR V + +
Sbjct: 518 PLPKTSTGKIQKYELRRKVKSTS 540
>gi|456355422|dbj|BAM89867.1| putative AMP-binding enzyme [Agromonas oligotrophica S58]
Length = 547
Score = 363 bits (933), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 275/449 (61%), Gaps = 22/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H +++++ VD + S + AL L PKP +I DD S
Sbjct: 103 RLDAPSIAFQLDHGQARIILVDPEFSGVISEALKLMSG----PKPFVIDVDDASYAGGSR 158
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P F+ +P EWD +A++YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 159 IGEIEYEAAVASGDPAFEPRRPTDEWDAIAMSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W MAA G N+CLRKV+ I+ +IK H VTH+CG
Sbjct: 219 AGGLGQHPVYLWTLPMFHCNGWCFPWTMAAAAGVNVCLRKVEPTKIFELIKAHRVTHMCG 278
Query: 173 ALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N+L ++P ++PV L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 279 APIVYNVLINAPDAPKGKREKPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERARLK RQGV + V+ PET V DG++ GE++FR
Sbjct: 339 SVCAEQPGWDDLPAPERARLKRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ ++ WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 399 IVMKGYLKNEKATAEAFA-GGWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAFV LK + TE II +CR+ + + K
Sbjct: 458 DILYKHPAVLFAAVVAKPDPKWGEVPCAFVELK--DGAQATEAEIIAYCRSHMSGFKTPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
+++ +PKT+TGKIQKF+LR V++
Sbjct: 516 TIVF-GPIPKTSTGKIQKFLLRNQVDSAK 543
>gi|91977191|ref|YP_569850.1| acyl-CoA synthetase [Rhodopseudomonas palustris BisB5]
gi|91683647|gb|ABE39949.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB5]
Length = 549
Score = 363 bits (932), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 200/449 (44%), Positives = 273/449 (60%), Gaps = 22/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H +K++ VD + + + AL PKP++I DD S
Sbjct: 105 RLDAPAIAFQLEHGGAKIILVDPEFAAVIADALKQMKG----PKPLVIDVDDKMFPGSHR 160
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P+F +P+ EWD +AL YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGELEYEYAVASGDPSFAGERPKDEWDAIALGYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W MAA G N+CLRKVD I+ +I+ HGVTH+ G
Sbjct: 221 AANLGAHPVYLWTLPMFHCNGWCFPWTMAAAAGVNVCLRKVDPAKIFDLIRRHGVTHMAG 280
Query: 173 ALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P RPV L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 281 APIVYNALINAPEAPKGAAARPVVGLIAGAAPPVAVLAGGESIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L+ +RA+LK RQGV + V+ PET V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDDLSVADRAQLKRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + + WF+TGD+GV+ GY+ IKDRSKD+IISGGEN+SS EVE
Sbjct: 401 IVMKGYLKNEKATKEALA-GGWFHTGDLGVLDPHGYVIIKDRSKDIIISGGENVSSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PAI A+VA+ D WG+ PCAFV LK S TE II +CR LP + K
Sbjct: 460 DVLYKHPAILFAAVVAKPDPKWGEVPCAFVELKEGASA--TEAEIISYCREHLPGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
S++ +PKT+TGKIQKF+LR+ V +
Sbjct: 518 SIMFS-AIPKTSTGKIQKFMLRDQVKSAK 545
>gi|338974499|ref|ZP_08629859.1| putative AMP-binding enzyme [Bradyrhizobiaceae bacterium SG-6C]
gi|338232372|gb|EGP07502.1| putative AMP-binding enzyme [Bradyrhizobiaceae bacterium SG-6C]
Length = 548
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 196/448 (43%), Positives = 275/448 (61%), Gaps = 24/448 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA------ 58
RLD ++ L H +K++ VD + S + A+ PKP+++ D +A
Sbjct: 104 RLDAAAIAFQLDHGGAKIILVDPEFSSVISDAMGQMKG----PKPLVVDVDDAAFDGGKR 159
Query: 59 ------TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ G P+F W+ P EWD +AL YTSGTT +PKGVV +RG ++ VS+++
Sbjct: 160 IGEIEYEAAVASGDPDFAWLTPNDEWDAIALGYTSGTTGNPKGVVTHYRGAYLNAVSNIL 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ P++LWTLPMFH NGW + W +AA G N+CLRKVD I+ +I HGVTH+CG
Sbjct: 220 AGGLGTHPIYLWTLPMFHCNGWCFPWTIAASAGVNVCLRKVDPAKIFELIPKHGVTHMCG 279
Query: 173 ALVVLNMLSSSPSTKPLDR---PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
A +V N L ++P P + PV L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 280 APIVYNTLINAPGA-PKGKAATPVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGP 338
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
CA + W+ L +RA+LK RQGV + V+ PET V DG++ GE++FR
Sbjct: 339 ASVCAEQPGWDDLPAEQRAQLKRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRG 398
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK++ + + WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EV
Sbjct: 399 NIVMKGYLKNEAATKEAF-EGGWFHTGDLGVLDEFGYVIIKDRSKDIIISGGENISSVEV 457
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ A+VA+ D WG+ PCAFV LK S TE I+ +C++ LP + +
Sbjct: 458 EDVLYKHPAVLFAAVVAKPDPKWGEVPCAFVELKDGASA--TEAEILAYCKSVLPGFKSP 515
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNA 437
K+V+ +PKT+TGKIQKF LR+ VN+
Sbjct: 516 KAVVF-GAIPKTSTGKIQKFALRDQVNS 542
>gi|339328023|ref|YP_004687715.1| medium-chain-fatty-acid--CoA ligase AlkK [Cupriavidus necator N-1]
gi|338170624|gb|AEI81677.1| medium-chain-fatty-acid--CoA ligase AlkK [Cupriavidus necator N-1]
Length = 562
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 194/449 (43%), Positives = 270/449 (60%), Gaps = 26/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD + V +L H E+++L VD + + LA AL + P+++ D+ T PT
Sbjct: 103 RLDAEGVRFILAHGEARILLVDSEFAALAATALQGLDN-----PPLVV--DILDTEGPTG 155
Query: 64 -------------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G +F + P+ EWD +ALNYTSGTTS PKGVV HRG +++++
Sbjct: 156 TRLGALDYEQLLSEGDVDFGGIWPDDEWDAIALNYTSGTTSDPKGVVPSHRGAYLMSMLQ 215
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
L DW +P P +LWTLPMFH NGW ++W + A GT++CLRKV I+ I H V H
Sbjct: 216 LTDWGMPRAPRYLWTLPMFHANGWCFAWAITAAAGTHVCLRKVTAENIFHAIDAHKVNHF 275
Query: 171 CGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
C A +VL L+++ + + V++ T+G+ PPA+VL +GF V H YG+TE +G
Sbjct: 276 CAAPIVLASLATASESERRLFSHAVRVRTAGSPPPASVLKAVMEMGFDVEHVYGITEASG 335
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
VS W+ E+ARL +RQG R L + V P+T V DG++QGE++ R
Sbjct: 336 TPVSSYRDPAWDDKPIEEKARLMSRQGNRAAALEGLRVADPDTMEPVPCDGKTQGELLLR 395
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M GYLK+ + +++ WF+TGD+ V+H DGY++I DRSKDVIISGGENISS E
Sbjct: 396 GNIVMKGYLKNPQ-ATVAAFSGGWFHTGDVAVMHPDGYIQITDRSKDVIISGGENISSVE 454
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VL+ +PA+ A+VAQ WG+ PCAF+ LK + PTE+ II+FCR RL HY
Sbjct: 455 VEDVLHRHPAVLIAAVVAQPHPKWGESPCAFIELKPGVD-APTEKEIIDFCRDRLAHYKC 513
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNA 437
V+ LPKT TGKIQK+ LRE+ +
Sbjct: 514 PVRVVY-GPLPKTGTGKIQKYRLRELAKS 541
>gi|421602710|ref|ZP_16045254.1| acyl-CoA synthetase [Bradyrhizobium sp. CCGE-LA001]
gi|404265181|gb|EJZ30317.1| acyl-CoA synthetase [Bradyrhizobium sp. CCGE-LA001]
Length = 549
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 197/447 (44%), Positives = 275/447 (61%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA------ 58
RLD ++ L H +K++ VD + S + AL+ PKP +I D +A
Sbjct: 105 RLDAPSIAFQLDHGGAKVILVDPEFSSVISDALAQMTG----PKPFVIDVDDTAFKGGKR 160
Query: 59 ------TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ +G PNF + P EWD +AL+YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGEIEYEAALGLGDPNFAAILPTDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W +AA G N+CLRKV+ I+ +IK HGVTH+CG
Sbjct: 221 AGNLGQHPVYLWTLPMFHCNGWCFPWTIAAAAGINVCLRKVEPSKIFELIKQHGVTHMCG 280
Query: 173 ALVVLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P + R V L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 281 APIVYNTLINAPDAPKGNAARRVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERAR+K RQGV + V++P+T V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDDLPAAERARMKRRQGVPYPLEEAVTVINPQTMREVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + + WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 401 IVMKGYLKNEKATREAF-EGGWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAFV LK S +E II FCR+ L + K
Sbjct: 460 DILYKHPAVLFAAVVAKPDAKWGEVPCAFVELKDGASA--SEADIIAFCRSHLSGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
+++ +PKT+TGKIQKF+LR V +
Sbjct: 518 AIVF-GPIPKTSTGKIQKFLLRNEVGS 543
>gi|118161328|gb|ABK64012.1| putative AMP-dependent synthetase and ligase [Janthinobacterium
lividum]
Length = 578
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/437 (42%), Positives = 269/437 (61%), Gaps = 12/437 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA------LAALSLFPSNTILPKPVLIHDDVSA 58
RLD ++ +L H ++K+L D + + LA + L + N +L V D+
Sbjct: 136 RLDLASLTFMLRHGQAKVLLADTEFAELARQMAAQIPGLRVIQVNDVLGPEVDAFSDLDY 195
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
S G P++ W P EWD +ALNYTSGTT PKGVV+ HRG + +S++++W +P
Sbjct: 196 ESLLASGDPDYDWQPPADEWDAIALNYTSGTTGDPKGVVYHHRGAALNALSNILEWDMPK 255
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
V+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ +TH C A +V
Sbjct: 256 HAVYLWTLPMFHCNGWCFPWTIAARAGVNVCLRKFEPKLVFDLMRELRITHYCAAPIVHA 315
Query: 179 MLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
L+++P+ +D V+ + +GA PPAA++ + E++GF + HSYGLTE G CA +
Sbjct: 316 ALANAPANWRDGIDWTVRGMVAGAPPPAAMVAKIEAMGFDLIHSYGLTEVYGPAAICAEQ 375
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
+W L+ ERA LK+RQGVR + + V+ PET V DG+ GEI+FR M GY
Sbjct: 376 DEWAALSQEERAVLKSRQGVRYHLQSAVAVIDPETMQPVAADGEQIGEIMFRGNICMKGY 435
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
LK++ + WF+TGD+GV++ DGY+++KDRSKD+IISGGENISS EVE LY +
Sbjct: 436 LKNERATQEAFA-GGWFHTGDLGVMYPDGYIKLKDRSKDIIISGGENISSVEVEDALYHH 494
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
P + A++AQ D+ WG+ PCAFV L+ TE +I FC+ L + K++
Sbjct: 495 PQVLAAAVIAQPDEKWGETPCAFVELR--EGGTVTEAELIAFCKNNLAGFKVPKAIYF-G 551
Query: 417 ELPKTATGKIQKFVLRE 433
LP+T+TGKIQKF LR+
Sbjct: 552 PLPRTSTGKIQKFELRK 568
>gi|405345688|ref|ZP_11022481.1| Long-chain-fatty-acid--CoA ligase [Chondromyces apiculatus DSM 436]
gi|397093737|gb|EJJ24434.1| Long-chain-fatty-acid--CoA ligase [Myxococcus sp. (contaminant ex
DSM 436)]
Length = 544
Score = 363 bits (932), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/441 (43%), Positives = 269/441 (60%), Gaps = 22/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF-----------PSNTILPKPVLIH 53
R D + ++ +L H E+K L VD + + +A AA+ P + P P L +
Sbjct: 102 RFDAQSIAFMLAHGEAKALLVDRELAAVASAAVDRLGRDILVIDVDAPELDLPPAPGLGY 161
Query: 54 DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
+ + A G P F + P+ EWD + LNYTSGTT PKGVV+ HRG F+ S++++
Sbjct: 162 ETLLAE-----GDPAFVYAGPDDEWDAICLNYTSGTTGDPKGVVYHHRGAFLNATSNILE 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P PV+LWTLP+FH NGW ++W +AA GTN+CLRKVD P + +I+ H VTH CGA
Sbjct: 217 WDLPKHPVYLWTLPLFHCNGWCFAWTVAARAGTNVCLRKVDAPTCFDLIREHRVTHYCGA 276
Query: 174 LVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V +ML +++ + + V + +GA+PPAA++ E LG ++H YGLTE G
Sbjct: 277 PIVHSMLIAAAAAHGQGVSHRVSGMVAGAAPPAAMIEAMEQLGIDLTHVYGLTEVYGPAA 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+ L +ERARL ARQG R + V+ P T V DG++ GE++FR
Sbjct: 337 VCEKHESWDALPISERARLNARQGARYHLQEAITVLDPATMQPVPADGETMGEVMFRGNI 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
M GYLK+ + WF+TGD+GV+ DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 397 TMKGYLKNPTATRAAF-SGGWFHTGDLGVLSPDGYVKIKDRSKDIIISGGENISSIEVED 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ A+VAQ D WG+ PCAF+ L+ + T E II FC+ RL + ++
Sbjct: 456 VLYRHPAVVGAAVVAQPDPKWGETPCAFIELR--PGAQATAEDIIAFCKERLSGFKVPRA 513
Query: 412 VIIEDELPKTATGKIQKFVLR 432
V+ LP+T+TGKIQKF LR
Sbjct: 514 VVF-GPLPRTSTGKIQKFELR 533
>gi|398820387|ref|ZP_10578914.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
gi|398228957|gb|EJN15052.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. YR681]
Length = 549
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 274/448 (61%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA------ 58
RLD ++ L H +K++ VD + S + AL+ PKP +I D +A
Sbjct: 105 RLDAPSIAFQLDHGGAKIILVDPEFSGVITDALAQMSG----PKPFVIDVDDAAFKGGKR 160
Query: 59 ------TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ G PNF + P+ EWD +AL+YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGEIEYEAAVAQGDPNFVAIPPKDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W +AA G N+CLRKV+ I+ +IK HGVTH+CG
Sbjct: 221 AGNLGQHPVYLWTLPMFHCNGWCFPWTIAAAAGINVCLRKVEPTKIFELIKLHGVTHMCG 280
Query: 173 ALVVLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P + R V L +GA+PP AVL E +G ++H YGLTE G
Sbjct: 281 APIVYNTLINAPDAPKGNAARRVVGLIAGAAPPVAVLEGAEDIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERAR+K RQGV + V++P+T V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDDLPAAERARMKRRQGVPYPLEEGVTVINPQTMQEVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + + + WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 401 IVMKGYLKNDKATKEAF-EGGWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAFV LK S TE II FCR+ + + K
Sbjct: 460 DILYKHPAVLFAAVVAKPDPKWGEVPCAFVELKDGASA--TEAEIIGFCRSHMSGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
+V+ +PKT+TGKIQKF+LR V +V
Sbjct: 518 AVVF-GPIPKTSTGKIQKFLLRNEVGSV 544
>gi|170747920|ref|YP_001754180.1| AMP-dependent synthetase and ligase [Methylobacterium radiotolerans
JCM 2831]
gi|170654442|gb|ACB23497.1| AMP-dependent synthetase and ligase [Methylobacterium radiotolerans
JCM 2831]
Length = 545
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 198/444 (44%), Positives = 261/444 (58%), Gaps = 24/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + L H E+ +L D + S A AAL + KP +I D P
Sbjct: 104 RLDADAIRFCLQHGEAAVLITDREFSRTAAAALEGLAT-----KPFVIDVDDPEYDGPGA 158
Query: 65 -------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P W P+ EWD + LNYTSGTT PKGVV+ HRG ++ + ++
Sbjct: 159 RLGATDYEAFLAGGDPEHDWRLPDDEWDAITLNYTSGTTGDPKGVVYHHRGAALLALGNV 218
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I + PV+LWTLPMFH NGW + W ++ V GT++CLR+V +Y ++ HGVTH+C
Sbjct: 219 ITGGLGQHPVYLWTLPMFHCNGWCFPWTLSIVAGTHVCLRQVRAEAMYRLMAEHGVTHLC 278
Query: 172 GALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V+ ML ++P + D P V T+ A PP AVL GF V+H YGLTE+ G
Sbjct: 279 GAPIVMQMLINAPDAERRDLPRRVAFFTAAAPPPEAVLAGMSEAGFDVTHLYGLTESYGP 338
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V AW + W+ LA +RA KARQGVR L +DV PET V DG + GE++ R
Sbjct: 339 AVVNAWHADWDALAADQRAAKKARQGVRYPVLEALDVRDPETLEPVPADGATIGEVMMRG 398
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + WF TGD+GV H DGY+++KDRSKD+IISGGENISS EV
Sbjct: 399 NVVMRGYLKNPAATRAAFA-GGWFRTGDLGVKHPDGYVQLKDRSKDIIISGGENISSIEV 457
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L+ +PA+ A+VA+ D WG+ PCAFV LK PT + +I++CR RL Y
Sbjct: 458 EDALFKHPAVAAAAVVARPDAKWGETPCAFVELK--AGAAPTADELIQWCRGRLASYKLP 515
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
+ VI ELPKT+TGK+QKF+LRE
Sbjct: 516 RHVIF-GELPKTSTGKVQKFILRE 538
>gi|388267622|gb|AFK25809.1| acyl-activating enzyme-like protein [Petunia x hybrida]
Length = 512
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 185/406 (45%), Positives = 254/406 (62%), Gaps = 37/406 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTI----------LPKPVLIHD 54
RLD ++++L HSE+KLLFVDY+ A AL L S +P+ +LI D
Sbjct: 97 RLDPMNIAIILKHSEAKLLFVDYEYLEKARKALELLMSTNFITAQNSKKISMPQVILIDD 156
Query: 55 DVSATSSPTV-----------GHPNFKWVQPES----EWDPMALNYTSGTTSSPKGVVHC 99
S T G+P + PE+ EWDP+ LNYTSGTTS PKGVV+
Sbjct: 157 LYSPTRIQQQDQLEYEQLVHQGNPEYA---PENIVDDEWDPIVLNYTSGTTSEPKGVVYS 213
Query: 100 HRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIY 159
HRG F+ T+++++ W + +PV+LW+LPMFH NGW+ +WG+AA GGTN+C+R IY
Sbjct: 214 HRGAFLSTLNTIMGWEMGTEPVYLWSLPMFHINGWTLTWGIAARGGTNVCIRNTTAQEIY 273
Query: 160 SVIKHHGVTHICGALVVLNMLSSSPSTKPLDR-----PVKILTSGASPPAAVLLRTESLG 214
S I H VTH+C A V N+L + KP +R PV+++ GA PP ++ + E LG
Sbjct: 274 SNITLHKVTHMCCAPTVFNILLEA---KPHERREITTPVQVMVGGAPPPTTLIGKIEELG 330
Query: 215 FVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMS 274
F V H YG+TE G + C W+S+WN L+ ++A LKARQG+ + L D+DV + +T S
Sbjct: 331 FHVVHCYGITEAGGTTLVCEWQSEWNKLSREDQANLKARQGISVLALEDVDVKNSKTMQS 390
Query: 275 VKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSK 334
V H+G++ GEI R SIM GY K+ + +S + N WF+TGD+ V+H DGYLEIKDR K
Sbjct: 391 VPHNGKTMGEICLRGSSIMKGYFKNDKANSQVFK-NGWFFTGDVAVIHQDGYLEIKDRCK 449
Query: 335 DVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFV 380
D+IISGGENISS EVE+ + +P++ E A+VA WG+ PCAFV
Sbjct: 450 DIIISGGENISSIEVENAILKHPSVIEAAVVAMPHPRWGETPCAFV 495
>gi|288959450|ref|YP_003449791.1| fatty-acyl-CoA synthase [Azospirillum sp. B510]
gi|288911758|dbj|BAI73247.1| fatty-acyl-CoA synthase [Azospirillum sp. B510]
Length = 551
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/442 (45%), Positives = 283/442 (64%), Gaps = 21/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L VD + S +A AL+L + P PV+ DD + + +
Sbjct: 113 RLDAEAIAFILKHGEAKILIVDREFSGVAKKALALLDA----PIPVVDIDDPAYSGGELI 168
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +++ W P EW +ALNYTSGTT +PKGVV+ HRG ++ VS+ +
Sbjct: 169 GDRDYEAFISDVGTEHPWTPPADEWQAIALNYTSGTTGNPKGVVYHHRGAYLNAVSNALS 228
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + + PV+LWTLPMFH NGW + W +A GT +CLR+V + ++I+ VT+ CGA
Sbjct: 229 WNMGDAPVYLWTLPMFHCNGWCFPWTIAVTAGTAVCLRQVRPDAVLTLIREERVTNFCGA 288
Query: 174 LVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLNML+++P+ + + VK++ +GA+PPAAV+ E +G+ V+H YGLTE G V
Sbjct: 289 PIVLNMLNNAPAELKQGIGHKVKVMVAGAAPPAAVIAGMERMGWEVTHVYGLTECYGPTV 348
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W +W+ L+ +A +KARQGVR L + V P T V DG+S GEI+ R +
Sbjct: 349 VCVWHDRWDGLSLDGKAAIKARQGVRGPMLEAVIVADPFTLEPVPKDGRSMGEIMMRGNN 408
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ + + WF+TGD+ V H DGY+EIKDRSKD+IISGGENISS EVE
Sbjct: 409 VMKGYLKNPKATEEAFA-GGWFHTGDLAVWHEDGYVEIKDRSKDIIISGGENISSIEVED 467
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P + E A+VA+ D+ WG+ PCAFV+LK S TE II FCR+ + H+ ++
Sbjct: 468 VLYKHPDVLEAAVVARHDEKWGETPCAFVTLKDGASA--TEADIIAFCRSHMAHFKCPRT 525
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+ LPKT+TGKIQK+VLR+
Sbjct: 526 VVF-GPLPKTSTGKIQKYVLRK 546
>gi|389704863|ref|ZP_10185967.1| acyl-CoA synthetase [Acinetobacter sp. HA]
gi|388611107|gb|EIM40216.1| acyl-CoA synthetase [Acinetobacter sp. HA]
Length = 546
Score = 362 bits (930), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 201/442 (45%), Positives = 280/442 (63%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + + +A AL+L + + + + D+ ++ +
Sbjct: 101 RLDAKTLAFMLEHAETKVLLVDPEFTAVAQEALALIKQDIYI---IDVADENYEEAADRI 157
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G NF+W P+ EWD ++LNYTSGTT +PKGVV+ HRG +I S++I
Sbjct: 158 GQIEYESWLAQGDANFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNIIA 217
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + +LWTLP+FH NGW ++W MAA GGTN+CLRKVD +I+ +I H V + CGA
Sbjct: 218 CGMMPRATYLWTLPLFHCNGWCFAWTMAANGGTNVCLRKVDPELIFQLIATHKVDYFCGA 277
Query: 174 LVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL+ML ++P K D V+++ +GA+PPAA++ ++G V+H YGLTET G
Sbjct: 278 PIVLSMLINTPEEKRTKFDHRVEVMVAGAAPPAAIIEGMRNIGINVTHVYGLTETYGPSA 337
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ L E+A+L +RQGV M V+ PET V HDG++ GEI+FR
Sbjct: 338 LCASQAGWSDLTIQEQAQLHSRQGVPYPLQDGMKVLDPETMQEVPHDGKTLGEIMFRGNI 397
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ E ++ WF+TGD+ V DGY +I DRSKDVIISGGENISS EVE
Sbjct: 398 VMKGYLKNPEATAEAFA-GGWFHTGDLAVCQPDGYAKITDRSKDVIISGGENISSLEVEE 456
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PAI A+VA+ D W + PCAF+ LK P E IIEFCR L + K
Sbjct: 457 VLYQHPAILTAAVVAKPDPRWQEVPCAFIELKQGFEVTPEE--IIEFCREHLARFKVPKD 514
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V+I E+PKT+TGK+QKFVLRE
Sbjct: 515 VVI-TEIPKTSTGKLQKFVLRE 535
>gi|27379624|ref|NP_771153.1| acyl-CoA synthetase [Bradyrhizobium japonicum USDA 110]
gi|27352776|dbj|BAC49778.1| blr4513 [Bradyrhizobium japonicum USDA 110]
Length = 555
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 195/451 (43%), Positives = 275/451 (60%), Gaps = 26/451 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--------- 55
RLD ++ L H ++++ VD + S + AL+ PKP +I D
Sbjct: 107 RLDAPSIAFQLDHGGARIILVDPEFSSVITDALAQMSG----PKPFVIDVDDPAFKGGKR 162
Query: 56 ---VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ ++ G P+F + P+ EWD +AL+YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 163 IGEIEYEAAVAQGDPDFTAIPPKDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 222
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W +AA G N+CLRKV+ I+ +IK HGVTH+CG
Sbjct: 223 AGNLGQHPVYLWTLPMFHCNGWCFPWTIAASAGINVCLRKVEPTKIFELIKQHGVTHMCG 282
Query: 173 ALVVLNMLSSSP------STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
A +V N L ++P ST R V L +GA+PP AVL E++G ++H YGLTE
Sbjct: 283 APIVYNTLINAPDAPKETSTGNAARRVVGLIAGAAPPVAVLEGAENIGIKLTHVYGLTEV 342
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G CA + W+ L ERAR+K RQGV + V++P+T V DG++ GE++
Sbjct: 343 YGPASVCAEQPGWDELPPAERARMKRRQGVPYPLEEGVTVINPQTMQEVPRDGETIGEVM 402
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
FR +M GYLK+++ + + WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS
Sbjct: 403 FRGNIVMKGYLKNEKATKEAF-EGGWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISS 461
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
EVE +LY +PA+ A+VA+ D WG+ PCAFV LK S TE II FCR+ + +
Sbjct: 462 VEVEDILYKHPAVLFAAVVAKPDPKWGEVPCAFVELKDGASA--TEAEIIAFCRSHMSGF 519
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
K+++ +PKT+TGKIQKF+LR V +
Sbjct: 520 KTPKAIVF-GPIPKTSTGKIQKFLLRNEVGS 549
>gi|399156271|ref|ZP_10756338.1| acyl-CoA synthetase [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 538
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 271/446 (60%), Gaps = 23/446 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + V+ +L + K L VD + PLA AL I K +LI DD SA P+V
Sbjct: 101 RLDAETVAYILKFGQVKALIVDRELLPLAQKALQ---DEQIKLKIILIDDD-SAEVKPSV 156
Query: 65 -------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P F + EW ++LNYTSGTT PKGVV+ HRG +++++ ++
Sbjct: 157 ELEVLEYEELINSGDPQFTCPPLQDEWQALSLNYTSGTTGRPKGVVYHHRGSYLMSMGTV 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
W +P+ P +L+ +PMFH NGW ++W M V T +C+R +++ +++ H +TH
Sbjct: 217 TAWELPHHPRYLYCVPMFHCNGWGHAWAMTLVAATVVCMRSFSPKLLFDLLERHDITHFG 276
Query: 172 GALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA VVLNML+++P+ K DR +K++T+GA PPA VL GF V H YGLTET G
Sbjct: 277 GAPVVLNMLANAPAEEQKHFDRSIKVMTAGAPPPAKVLESMTEFGFDVLHVYGLTETYGH 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
++ A +S W + R+ L +RQGVR + D+ V+ P+T V DG++ GEIV R
Sbjct: 337 ILESAPQSDWQDQSAARRSELISRQGVRFPMMEDVSVIDPKTKKVVPSDGKTIGEIVMRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+ M GYL ++E ++ D WF++GD+ VV DGY++IKDR+KD+IISGGENISS E+
Sbjct: 397 NTTMKGYLNNKEATAEAF-DGGWFHSGDLAVVQEDGYIQIKDRAKDIIISGGENISSVEI 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E+VLY +PA+ E A+VA D WG+ PCAF+ LK S K E IIEFC + +
Sbjct: 456 ENVLYKHPAVGEAAVVAMPDDKWGEVPCAFIELKAGKSTKDQE--IIEFCTQHMARFKRP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLREIV 435
K +I LPKTATGKIQK LR+ +
Sbjct: 514 KKIIF-GPLPKTATGKIQKHELRQRI 538
>gi|400754083|ref|YP_006562451.1| acyl-CoA synthetase [Phaeobacter gallaeciensis 2.10]
gi|398653236|gb|AFO87206.1| acyl-CoA synthetase [Phaeobacter gallaeciensis 2.10]
Length = 542
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 197/449 (43%), Positives = 269/449 (59%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD V+ + H E+K++ VD Q LA A + P P++I S P
Sbjct: 103 RLDVSTVAYIFDHGEAKVVLVDSQFLTLAEEAKAACDG----PGPLIIEVPDDQASYPAS 158
Query: 65 G-HP-----------NFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G HP +F W+ P+ EW+ +ALNYTSGTT PKGVV+ HRG +++T+ ++I
Sbjct: 159 GRHPIYEDILAAAAHDFDWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ QP +L +P+FH NGW+++W M +GGT IC R + P IY I G TH G
Sbjct: 219 SWRMVMQPKYLAIVPLFHCNGWNHTWMMPVLGGTLICCRDITAPAIYDAIADEGATHFGG 278
Query: 173 ALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML ++P + D V++ T+GA P A L + E+LGF V+ YGLTET G V
Sbjct: 279 APIVLNMLVNAPDGDRRSFDHTVEVFTAGAPPAPATLEKIEALGFHVTQVYGLTETYGHV 338
Query: 231 VSCAWKSQ-WNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C WK W+TL RA +KARQGV + D V + + +GQ QGEIV R
Sbjct: 339 TECLWKGDSWDTLDQQGRAAIKARQGV-AFPMMDHITVMRDDMQQIAMNGQDQGEIVMRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
S+M GYLK+ + ++ + +F++GDI V H DGY++I DR+KD+IISGGENISS EV
Sbjct: 398 NSVMKGYLKNPDATAEAFQ-GGYFHSGDIAVQHPDGYIQIADRAKDIIISGGENISSVEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VL +P +N A+VA+ D WG+ PCAFV LK + P + +I F R L + A
Sbjct: 457 EGVLMGHPDVNLAAVVAKPDDKWGEVPCAFVELKPGATVDPAD--LIRFARETLAGFKAP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K V+ + ELPKT+TGKIQKF LR+ A+
Sbjct: 515 KQVVFQ-ELPKTSTGKIQKFELRQQAKAL 542
>gi|302768957|ref|XP_002967898.1| hypothetical protein SELMODRAFT_440085 [Selaginella moellendorffii]
gi|300164636|gb|EFJ31245.1| hypothetical protein SELMODRAFT_440085 [Selaginella moellendorffii]
Length = 535
Score = 362 bits (929), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 199/454 (43%), Positives = 275/454 (60%), Gaps = 43/454 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF--PSNTILPKP--VLIHDDVSATS 60
RLD + V+ L HHS K + VD + L AL + + T+ P V+I D+
Sbjct: 94 RLDQRTVATLFHHSGVKAVLVDEEFLHLISGALRDWTAKAGTLFQAPFVVVIRDEFFQGM 153
Query: 61 SPT-------------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
+ G P+F+W +PE E + ++++YTSGTT+SPKGV+ HRG ++
Sbjct: 154 ENSWPPGSSDYEDFLREGDPSFEWSRPEDETETISVSYTSGTTASPKGVMLTHRGAYLSA 213
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+S + W + + ++LWTLP+FH NGW + W +AA+ GTNICLR+V I++ I H V
Sbjct: 214 LSECVTWEMKHGCIYLWTLPLFHCNGWCFPWAVAALAGTNICLRQVTAKGIFAAIAEHNV 273
Query: 168 THICGALVVLNMLSSSPSTKPLD----RPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
T+ C A VL+ + S+ + R V+I+T+GA+PPAAVL + E+LGF V+H YGL
Sbjct: 274 TNFCAAPTVLSTIISAATGSTFSRLQHRQVRIMTAGAAPPAAVLAKIEALGFHVTHVYGL 333
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TET G ARLKARQGV+ +GL + V++ ET V DG + G
Sbjct: 334 TETYG-------------------ARLKARQGVKYVGLDGLQVLNSETLEPVAKDGVTIG 374
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
E+ R + GYL + E + R WF++GD+ V H DGY+EIKDR+KD+IISGGEN
Sbjct: 375 EVCMRGNMVFKGYLNNPEATLESFR-GGWFHSGDLAVWHPDGYIEIKDRAKDIIISGGEN 433
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL 403
ISS EVES+LY +PA+ E A+VA+ D+ WG+ PCAFVSLK+ + + EE I+ FCR L
Sbjct: 434 ISSLEVESILYRHPAVLEAAVVARPDEKWGESPCAFVSLKYGV--RSNEEEILSFCRQHL 491
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
P +M KSV+I L KTATGKIQK VLR A
Sbjct: 492 PKFMVPKSVVILAALDKTATGKIQKQVLRSKARA 525
>gi|90424207|ref|YP_532577.1| acyl-CoA synthetase [Rhodopseudomonas palustris BisB18]
gi|90106221|gb|ABD88258.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
BisB18]
Length = 549
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 275/447 (61%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RL+ ++ L H +K++ VD + + + AL+L P+P++I DD S +
Sbjct: 105 RLEPSSIAFQLDHGGAKVILVDPEFAAVISDALALMAG----PRPLVIDVDDASFSGGQR 160
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P+F V+P+ EWD ++L YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGEIEYEAALAAGDPDFVGVRPDDEWDAISLGYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
PV+LWTLPMFH NGW + W +AA G N+CLRKVD I+ +I+ HGVTH+ G
Sbjct: 221 AANFGPHPVYLWTLPMFHCNGWCFPWTIAAAAGVNVCLRKVDPAKIFELIEQHGVTHMSG 280
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++PS P ++PV L +GA+PP AVL E++G ++H YGLTE G
Sbjct: 281 APIVYNTLINAPSAPKTPRNKPVVGLIAGAAPPVAVLAGAETIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERA+LK RQGV + V P+T V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDDLPVAERAQLKRRQGVPYPLQEAVTVRDPDTMEEVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + WF+TGD+GV+ GY+ IKDRSKD+IISGGEN+SS EVE
Sbjct: 401 IVMKGYLKNEKATQEAFA-GGWFHTGDLGVLDEFGYVIIKDRSKDIIISGGENVSSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PAI A+VA+ D WG+ PCAFV LK + TE II FCR +P + K
Sbjct: 460 DILYKHPAILFAAVVAKPDPKWGEVPCAFVELK--DGAQATEAEIIAFCREHMPGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
V+ +PKT+TGKIQKF+LR+ V +
Sbjct: 518 -VVTFATIPKTSTGKIQKFMLRDQVKS 543
>gi|110634877|ref|YP_675085.1| acyl-CoA synthetase [Chelativorans sp. BNC1]
gi|110285861|gb|ABG63920.1| AMP-dependent synthetase and ligase [Chelativorans sp. BNC1]
Length = 558
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 193/444 (43%), Positives = 271/444 (61%), Gaps = 21/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL--------------PKPV 50
RLD + ++ L HSESK+L VD + S LA AL+L ++ I+ PK
Sbjct: 102 RLDAQAIAFQLEHSESKVLIVDREFSSLASDALALLKNSPIVIDYDDPEYPDDAPYPKGP 161
Query: 51 LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
I + + G+P+F P EWD ++LNYTSGTT +PKGVV HRG ++ ++
Sbjct: 162 FI-GSLEYAAFLRSGNPDFLPPPPRDEWDAISLNYTSGTTGNPKGVVCHHRGAALMALNK 220
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
I + PV+LWTLP+FH NGWS+SW +A GT++CLR V ++Y +I HGVTH+
Sbjct: 221 TIHGEMGKHPVYLWTLPLFHCNGWSFSWTVAVQAGTHVCLRWVRARVVYDLIADHGVTHL 280
Query: 171 CGALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V++ L ++P + +T+ A PP AVL GF V H YGLTET G
Sbjct: 281 CGAPIVMSTLLNAPDEDKRRFSHEAIFITAAAPPPEAVLAAMRDAGFRVLHLYGLTETYG 340
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ WK++W+ L E+A KARQGVR + L+++ V+ ET V DG++ GE++ R
Sbjct: 341 PAMVNEWKAEWDALPPAEQAAHKARQGVRYLSLSEVAVLDSETMQPVPADGETMGEVMMR 400
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M GYLK+Q+ + WF+TGD+GV+H DGY+++KDRSKD+IISGGENISS E
Sbjct: 401 GNVVMKGYLKNQKATEEAF-SGGWFHTGDLGVMHPDGYVQLKDRSKDIIISGGENISSIE 459
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE LY +P + + A+VA D+ WG+RP AFV L+ + E I+ +C+A L +
Sbjct: 460 VEDALYRHPKVMQCAVVAMPDEKWGERPVAFVELRPNVHADEAE--ILSYCKATLARFKC 517
Query: 409 HKSVIIEDELPKTATGKIQKFVLR 432
+I E LPKT+TGKIQKF LR
Sbjct: 518 PSRIIFE-TLPKTSTGKIQKFALR 540
>gi|395762003|ref|ZP_10442672.1| acyl-CoA synthetase [Janthinobacterium lividum PAMC 25724]
Length = 544
Score = 362 bits (928), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 183/437 (41%), Positives = 270/437 (61%), Gaps = 12/437 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA------LAALSLFPSNTILPKPVLIHDDVSA 58
RLD + +L H ++K+L D + + LA + L + N +L V D+
Sbjct: 102 RLDLASLIFMLRHGQAKVLLADTEFAELARQMAAQIPGLRVIQVNDVLGPEVAAFSDLDY 161
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
S G P++ W +P EWD +ALNYTSGTT PKGVV+ HRG + +S++++W +P
Sbjct: 162 ESLLASGDPDYDWPRPADEWDAIALNYTSGTTGDPKGVVYHHRGAALNALSNILEWDMPK 221
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
V+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ +TH C A +V
Sbjct: 222 HAVYLWTLPMFHCNGWCFPWTIAARAGVNVCLRKFEPKLVFDLMRELRITHYCAAPIVHA 281
Query: 179 MLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
L+++P+ +D V+ + +GA PPAA+L + +++GF + HSYGLTE G CA +
Sbjct: 282 ALANAPANWRAGIDWTVRGMVAGAPPPAAMLAKIDAMGFDLIHSYGLTEVYGPAAICAEQ 341
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
W L+ ERA K+RQGVR + + V+ PET V DG+ GEI+FR M GY
Sbjct: 342 DAWAALSQEERAVFKSRQGVRYHLQSAVAVLDPETMQPVAADGEQIGEIMFRGNICMKGY 401
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
LK+++ + WF+TGD+GV+++DGY+++KDRSKD+IISGGENISS EVE LY +
Sbjct: 402 LKNEKATQEAFA-GGWFHTGDLGVMYADGYIKLKDRSKDIIISGGENISSVEVEDALYHH 460
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
P + A++AQ D+ WG+ PCAFV L+ S T E ++ FC+ L + K++
Sbjct: 461 PQVLAAAVIAQPDEKWGETPCAFVELREGASV--TAEELMAFCKNNLAGFKVPKAIYF-G 517
Query: 417 ELPKTATGKIQKFVLRE 433
LP+T+TGKIQKF LR+
Sbjct: 518 PLPRTSTGKIQKFELRK 534
>gi|294083872|ref|YP_003550629.1| acyl-CoA synthase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292663444|gb|ADE38545.1| acyl-CoA synthase [Candidatus Puniceispirillum marinum IMCC1322]
Length = 536
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 191/441 (43%), Positives = 276/441 (62%), Gaps = 19/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD-------VS 57
+LD ++ +L H E+K+LFVD + S +A A++ + ++ + I D +
Sbjct: 101 KLDAGTIAYILEHGEAKVLFVDTEFSDVAAKAVAQSDRDLLI---IDIEDSEGPGGDKIG 157
Query: 58 ATSSPTV---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
A + + G PNF + P+ EWD +ALNYTSGTT PKGVV+ HRG ++ V++++ W
Sbjct: 158 ALTYDALLAEGDPNFPYCLPDDEWDALALNYTSGTTGRPKGVVYSHRGSWMNAVNNVVTW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P+ PV+LWTLP+FH NGW + W + + GT++ LR IY + VTH+CGA
Sbjct: 218 EMPHHPVYLWTLPLFHCNGWCFPWTITLLAGTHVFLRAPRADAIYDAFVDYKVTHLCGAP 277
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
++++M+ S+ + + +K++T+ A PPA+V+ E+LG ++H YGLTE G V CA
Sbjct: 278 IIMSMILSASEKRKFSQKIKMMTAAAPPPASVIQGIEALGISITHVYGLTEVYGPAVVCA 337
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
K W LA ++A LKARQGV D+ V++PET + V DG++ GE+ FR +M
Sbjct: 338 EKPVWARLAPEKQAELKARQGVAYELEEDVLVLNPETSVPVAWDGETLGEVAFRGNIVMK 397
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLKD ++ R WF++GDI V H+DGY+EI+DRSKD+IISGGENISS EVE LY
Sbjct: 398 GYLKDPVETAKAFR-GGWFWSGDIAVQHADGYIEIRDRSKDIIISGGENISSIEVEKALY 456
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA++ VA+VA D+ WG+ PCAFV ELS + +E ++ R L Y K VI
Sbjct: 457 SHPAVSLVAVVAMPDEKWGEVPCAFV----ELSGQASEAELLAHAREGLAGYQCPKKVIF 512
Query: 415 EDELPKTATGKIQKFVLREIV 435
ELPKT TGKI+K LR+ V
Sbjct: 513 -GELPKTTTGKIRKNELRDQV 532
>gi|224825618|ref|ZP_03698723.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
gi|224602539|gb|EEG08717.1| AMP-dependent synthetase and ligase [Pseudogulbenkiania
ferrooxidans 2002]
Length = 546
Score = 361 bits (927), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/443 (45%), Positives = 272/443 (61%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + ++ +L H E+K+L D + AL+L + KP++I DD T
Sbjct: 104 RLDAESIAFMLRHGEAKVLITDREFCEPVAKALALLDT-----KPLVIDVDDHLFTGGDL 158
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P F W P EWD ++LNYTSGTT +PKGVV+ HRG ++ V +L
Sbjct: 159 LGETDYEALLQEGDPEFAWSLPNDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAVCNLF 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W +P V+LWTLPMFH NGW + W MAA GTN+ LR+VD I++ IK H VTH C
Sbjct: 219 EWGVPRHAVYLWTLPMFHCNGWCFPWAMAANAGTNVFLRRVDPRQIFAQIKQHRVTHYCA 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V NM+ + + ++ V L +GA+PPAAV+ + LGF ++H YGLTET G
Sbjct: 279 APIVHNMMINVADECGQGIEHEVSCLVAGAAPPAAVIEGMQRLGFNITHVYGLTETYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + +W L+ ER RQGVR M V++PET V DG++ GEI+FR
Sbjct: 339 GVCAKQPEWEALSLAERTERNGRQGVRYAMQEGMTVMNPETMQQVPADGETMGEIMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+Q+ S+ WF+TGD+ V+ DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 399 LVMKGYLKNQDASAEAFA-GGWFHTGDLAVLQPDGYVKIKDRSKDIIISGGENISSLEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ A+VA+ D WG+ CAFV LK TE II++CRA L H+ A K
Sbjct: 458 DVLYRHPAVMSAAVVAKPDTKWGEVTCAFVELK--DGAVATEREIIDYCRAHLAHFKAPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V+ +PKT+TGKIQKF+LR+
Sbjct: 516 QVVF-GPIPKTSTGKIQKFLLRQ 537
>gi|145588698|ref|YP_001155295.1| AMP-dependent synthetase/ligase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145047104|gb|ABP33731.1| AMP-dependent synthetase and ligase [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 551
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 278/445 (62%), Gaps = 22/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD------DVSA 58
RLD + V+ +L+H E+K++ VD + S + AL + ++ + +L+ D DV
Sbjct: 103 RLDAESVAFMLNHGEAKVVIVDPEFSGVMKKALEIVKKDS--GREILVIDVEEKEFDVPG 160
Query: 59 TSSPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
TV G P F + PE EW + LNYTSGTT +PKGVV+ HRG I VS+
Sbjct: 161 ECLGTVTYDQLLSEGDPEFPLIVPEDEWQAICLNYTSGTTGNPKGVVYHHRGAAINAVSN 220
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++DW I P++LWTLPMFH NGW + W +AA G N+CLR+VD I++ IK HGVTH
Sbjct: 221 VLDWDINKHPIYLWTLPMFHCNGWCFPWTIAARAGVNVCLRRVDAQHIFAAIKEHGVTHY 280
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
C A +V N+L ++P + P VK L +GA+PPA+++ E LGF ++H YGLTE G
Sbjct: 281 CAAPIVHNLLVNAPDELKVGVPSGVKGLIAGAAPPASIIEGMEKLGFDLTHVYGLTEVYG 340
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C + +WN + ERARL ARQGVR +DV+ PET V DG++ GEI+F+
Sbjct: 341 PAAVCVKQDEWNDVDIGERARLNARQGVRYHMQQAIDVIDPETMQPVPADGETMGEIMFK 400
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+++ + + WF++GD+ V + DGY+++KDRSKD+IISGGENISS E
Sbjct: 401 GNIAMKGYLKNEKATKEAF-EGGWFHSGDLAVKNPDGYVKMKDRSKDIIISGGENISSVE 459
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +PA+N A+VA+ D WG+ PC F+ +K + T E +I C+ L +
Sbjct: 460 VEDVLYRHPAVNAAAVVAKPDPKWGETPCTFLEIK--PGAEVTVEEMIAHCKQHLAGFKV 517
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++++ ELPKT+TGKIQKF LR+
Sbjct: 518 PRAIVF-CELPKTSTGKIQKFELRK 541
>gi|170740907|ref|YP_001769562.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
gi|168195181|gb|ACA17128.1| AMP-dependent synthetase and ligase [Methylobacterium sp. 4-46]
Length = 543
Score = 361 bits (927), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 199/448 (44%), Positives = 270/448 (60%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--------- 55
RLD ++ L H E+K+L D + + + AL+L + V+ +DD
Sbjct: 104 RLDAAIIAFCLDHGEAKVLITDREFARVIKPALALAKVRPL----VIDYDDPEFGGEGER 159
Query: 56 ---VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ + G P W P EWD ++LNYTSGTT PKGVV+ HRG ++ V ++I
Sbjct: 160 LGSLDYEAFLASGDPAHAWSLPGDEWDAISLNYTSGTTGDPKGVVYHHRGASLLAVGNVI 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W ++ V GT++CLR+V +Y I HGVTH+CG
Sbjct: 220 TTGLGKHPVYLWTLPMFHCNGWCFPWTLSVVAGTHVCLRQVRAKPMYDAIADHGVTHLCG 279
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V+ +L ++P+ + L V T+ A PP AVL GF V+H YGLTET G
Sbjct: 280 APIVMQLLLNAPAAERRALPHRVSFFTAAAPPPEAVLAGMAEAGFDVTHLYGLTETYGPA 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V W + W+ L E+A KARQGVR L +DV+ PET V DGQS GE++FR
Sbjct: 340 VVNEWHADWDALTKPEQAARKARQGVRYPPLEALDVLDPETMRPVPADGQSLGEVMFRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + R WF++GD+GV H DGY+++KDRSKD+IISGGENISS EVE
Sbjct: 400 VVMRGYLKNPTATQAAFR-GGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
L+ +PA+ A+VA+ D+ WG+ PCAFV LK S+ + E +I +CR L Y K
Sbjct: 459 EALFKHPAVAAAAVVAKPDEKWGETPCAFVELKG--SEMVSAEELIGWCRQSLAGYKVPK 516
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
V+ ELPKT+TGKIQKFVLRE+ A+
Sbjct: 517 HVVFT-ELPKTSTGKIQKFVLREMAKAL 543
>gi|149915939|ref|ZP_01904463.1| AMP-dependent synthetase and ligase [Roseobacter sp. AzwK-3b]
gi|149810262|gb|EDM70108.1| AMP-dependent synthetase and ligase [Roseobacter sp. AzwK-3b]
Length = 542
Score = 360 bits (924), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 193/446 (43%), Positives = 267/446 (59%), Gaps = 22/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH--DDVSATSSP 62
RL+ ++ +L H +K+L VD Q P+A A+ + P P +I DD + +
Sbjct: 103 RLEADTIAYILDHGGAKVLLVDPQFLPVAAEAIDMMDG----PAPTVIEVADDQAGAHAH 158
Query: 63 ----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F+W+ PE EW+ +ALNYTSGTT PKGVV HRG +++T+ + I
Sbjct: 159 GHYMEYEELLASGDPAFEWIMPEDEWESLALNYTSGTTGRPKGVVCHHRGAYLMTMGTAI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P +L +P+FH N W+++W M VGGT IC R + IY I GVTH
Sbjct: 219 SWPMPRHARYLTIVPLFHCNNWNHTWMMPMVGGTVICCRDITASAIYDAIADEGVTHFGA 278
Query: 173 ALVVLN-MLSSSPST-KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN ++++ P + D V++ T+GA PPAA L E LGF V+ YGLTET G V
Sbjct: 279 APIVLNTIVNAKPEDRRDFDHVVEVFTAGAPPPAATLRAIEPLGFQVTQVYGLTETYGHV 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C W+++W+ LAD +R +KAR GV + D+ + PET + DG +QGEI+ R
Sbjct: 339 TECLWQTRWDGLADDDRYAIKARTGVLMPMMEDITAMDPETMIQTPMDGTTQGEIMIRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + + R +F++GDI V H DGYL+I DR+KD+IISGGENISS EVE
Sbjct: 399 AVMKGYLKNPKATEEAFR-GGYFHSGDIAVQHPDGYLQIADRAKDIIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VL M+PA+ A+VA+ D+ WG+ PCAFV +K TE +I F R RL + K
Sbjct: 458 GVLMMHPAVLLCAVVAKPDEKWGEVPCAFVEIK--DGADTTEAELIAFARHRLAGFKTPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVN 436
V ELPKT+TGKIQKF LR++
Sbjct: 516 RVEFR-ELPKTSTGKIQKFELRKLAR 540
>gi|254475129|ref|ZP_05088515.1| AMP-dependent synthetase and ligase [Ruegeria sp. R11]
gi|214029372|gb|EEB70207.1| AMP-dependent synthetase and ligase [Ruegeria sp. R11]
Length = 542
Score = 360 bits (924), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 266/445 (59%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD V+ + H E+K++ VD Q LA A + P++I P
Sbjct: 103 RLDVGTVAYIFDHGEAKIVLVDSQFLSLAEQA----KQDCEGKGPLIIEVPDEQAGYPAS 158
Query: 65 G-HP-----------NFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G HP +F W+ P+ EW+ +ALNYTSGTT PKGVV+ HRG +++T+ ++I
Sbjct: 159 GRHPVYEDVLSAASHDFDWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ QP +L +P+FH NGW+++W M +GGT +C R + P IY I GVTH G
Sbjct: 219 SWRMVMQPKYLAIVPLFHCNGWNHTWMMPVLGGTLVCCRDITAPAIYDAIADEGVTHFGG 278
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNM+ ++P + D V++ T+GA P A L + E+LGF V+ YGLTET G V
Sbjct: 279 APIVLNMIVNAPQDQRRSFDHTVEVFTAGAPPAPATLEKIEALGFHVTQVYGLTETYGHV 338
Query: 231 VSCAWK-SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C WK W+ L RA +KARQGV + D V ET + +GQ QGEIV R
Sbjct: 339 TECLWKGGSWDNLDQQGRATIKARQGV-AFPMMDHITVMDETMSQIPMNGQDQGEIVMRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
S+M GYLK+ + + + +F++GDI V H DGY++I DR+KD+IISGGENISS EV
Sbjct: 398 NSVMKGYLKNPDATQEAFK-GGYFHSGDIAVQHPDGYIQIADRAKDIIISGGENISSVEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VL +PA+N A+VA+ D WG+ PCAFV LK + E A+I F R L + A
Sbjct: 457 EGVLMAHPAVNLAAVVAKPDDKWGEVPCAFVELK--PGEDVDEAALIAFSRDTLAGFKAP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREI 434
K V+ + ELPKT+TGKIQKF LR I
Sbjct: 515 KKVVFQ-ELPKTSTGKIQKFELRSI 538
>gi|154246404|ref|YP_001417362.1| AMP-dependent synthetase and ligase [Xanthobacter autotrophicus
Py2]
gi|154160489|gb|ABS67705.1| AMP-dependent synthetase and ligase [Xanthobacter autotrophicus
Py2]
Length = 542
Score = 360 bits (923), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 271/449 (60%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-HDDVSATSSP- 62
RLD ++ L H E+K+L D + SP+ AAL++ KPV+I +DD T
Sbjct: 103 RLDAAILAFTLDHGEAKVLITDREFSPVMKAALAMATR-----KPVVIDYDDPEFTGKGE 157
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G +F W P+ EWD +ALNYTSGTT PKGVV+ HRG ++ V ++
Sbjct: 158 RIGTIEYEDFLATGDADFAWKTPDDEWDAIALNYTSGTTGDPKGVVYHHRGAHLLAVGNV 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ + PV+LWTLPMFH NGW + W + GT++CLR+V I+ I + VTH+C
Sbjct: 218 VTCSLGKHPVYLWTLPMFHCNGWCFPWSITLAAGTHVCLRQVRAKPIFDAIADYKVTHMC 277
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V++ L ++P +PL V+ +T+ A PP AVL + GF V H YGLTE G
Sbjct: 278 GAPIVMSTLLNTPDADKRPLPHKVEFITAAAPPPEAVLAAMQEAGFNVVHVYGLTEVYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V W ++W+ L ERA KARQGVR L +DV+ P+T + V DG++ GE++FR
Sbjct: 338 SVVNEWHAEWDALPAQERAIKKARQGVRYGALEALDVLDPDTMVPVPADGETLGEVMFRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + WF++GD+GV H DGY+++KDRSKD+IISGGENISS EV
Sbjct: 398 NVVMKGYLKNPTATDAAFA-GGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA++ A+VA+ D+ WG+ P AFV L+ S T E +I CR L Y
Sbjct: 457 EDALYKHPAVSAAAVVAKPDEKWGETPVAFVELREGASA--TAEDLIAHCRTHLAAYKCP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
+ ++ E E+PKT+TGKIQKF LRE+ V
Sbjct: 515 RHIVFE-EIPKTSTGKIQKFRLREMAKEV 542
>gi|383771866|ref|YP_005450931.1| acyl-CoA synthetase [Bradyrhizobium sp. S23321]
gi|381359989|dbj|BAL76819.1| acyl-CoA synthetase [Bradyrhizobium sp. S23321]
Length = 549
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 271/447 (60%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H +K++ VD + S + AL+ PKP +I DD S
Sbjct: 105 RLDAPSIAFQLDHGGAKIILVDPEFSGVITDALAQMKG----PKPFVIDVDDASFKGGKR 160
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G +F + P EWD +AL+YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGEIEYEAAIAQGDSDFVAIPPRDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W MAA G N+CLRKV+ I+ +I+ HGVTH+CG
Sbjct: 221 AGNLGQHPVYLWTLPMFHCNGWCFPWTMAAAAGINVCLRKVEPTRIFELIRTHGVTHMCG 280
Query: 173 ALVVLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P + R V L +GA+PP AVL E++G ++H YGLTE G
Sbjct: 281 APIVYNTLINAPDAPKGNAVRRVVGLIAGAAPPVAVLEGAENIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERAR+K RQGV + V++P+T V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDELPPAERARMKRRQGVPYPLEEGVTVINPQTMQQVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + + WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 401 IVMKGYLKNEKATKEAF-EGGWFHTGDLGVLDEHGYVTIKDRSKDIIISGGENISSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAFV LK S TE II FCR + + K
Sbjct: 460 DILYKHPAVLFAAVVAKPDPKWGEVPCAFVELKDGASA--TEADIIAFCRTHMSGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
+V+ +PKT+TGKIQKF+LR V +
Sbjct: 518 AVVF-GPIPKTSTGKIQKFLLRNEVGS 543
>gi|374575513|ref|ZP_09648609.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
gi|374423834|gb|EHR03367.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM471]
Length = 549
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 271/442 (61%), Gaps = 22/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA------ 58
RLD ++ L H +K++ VD + S + AL+ PKP +I D +A
Sbjct: 105 RLDAPSIAFQLDHGGAKIILVDPEFSSVITDALAQMTG----PKPFVIDVDDAAFKGGRR 160
Query: 59 ------TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ G P+F + P EWD +AL+YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGEIEYEAALAQGDPDFAAILPGDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
++ PV+LWTLPMFH NGW + W +AA G N+CLRKV+ I+ +IK HGVTH+CG
Sbjct: 221 AGQLGQHPVYLWTLPMFHCNGWCFPWTIAAAAGINVCLRKVEPTKIFELIKQHGVTHMCG 280
Query: 173 ALVVLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P + R V L +GA+PP AVL ESLG ++H YGLTE G
Sbjct: 281 APIVYNTLINAPDAPKGNAARRVVGLIAGAAPPVAVLEGAESLGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERA LK RQGV + V+ P+T V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDDLPAAERASLKRRQGVPYPLEEAVTVIDPQTMRQVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + + + WF+TGD+GV+ + GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 401 IVMKGYLKNDKATQEAF-EGGWFHTGDLGVLDAHGYVIIKDRSKDIIISGGENISSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAFV LK S +E II FCR+ + + K
Sbjct: 460 DILYKHPAVLFAAVVAKPDPKWGEVPCAFVELKDGASA--SEADIIAFCRSHMSGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
+V+ +PKT+TGKIQKF+LR
Sbjct: 518 AVVF-GPIPKTSTGKIQKFLLR 538
>gi|427427910|ref|ZP_18917952.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
gi|425882611|gb|EKV31290.1| Long-chain-fatty-acid--CoA ligase [Caenispirillum salinarum AK4]
Length = 547
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 192/447 (42%), Positives = 269/447 (60%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K + D + S AL + PV+ DD A +
Sbjct: 104 RLDAEAIAFILDHGEAKFVITDREFSRTMKEALEKLGRDI----PVIDIDDSEAGDVGDL 159
Query: 65 ------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P+F W P+ EW+ +ALNYTSGTT +PKGVV+ HRG ++ +S+++
Sbjct: 160 IGEKTYEALLEEGEPDFAWRWPKDEWEAIALNYTSGTTGNPKGVVYHHRGAYLNAMSNVV 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P +LWTLPMFH NGW + W +A +GGT++CLRKV I+ I VTH CG
Sbjct: 220 TWSMPPHATYLWTLPMFHCNGWCFPWTLAIIGGTSVCLRKVTAKNIFDAIADEKVTHFCG 279
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V+ + ++ + + D+ V ++T+ A PPA+VL R + GF V+H YGLTET G
Sbjct: 280 APIVMGFIVNAKDSDKREFDQKVNVMTAAAPPPASVLERMQREGFNVTHVYGLTETYGPA 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CAWK +WN L E+A K+RQGVR + + V+ PET DG++ GE++ R
Sbjct: 340 TVCAWKEEWNDLPVEEQAARKSRQGVRYVVQEGLTVMDPETMQETPADGETIGEVMMRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
M GYLK+ + S WF+TGD+GV+H DGY+++KDRSKD+IISGGENISS EVE
Sbjct: 400 ITMKGYLKNPKASQEAFA-GGWFHTGDLGVMHDDGYIQLKDRSKDIIISGGENISSIEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VL+ +PA+N A+VA+ D WG+ P A+V L + + E +I FCR L H+ +
Sbjct: 459 GVLHKHPAVNAAAVVAKPDDKWGETPLAYVELC--EGQAVSAEDLIAFCREHLAHFKCPR 516
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
V ELPKT+TGKIQKFVLR +
Sbjct: 517 EVRFV-ELPKTSTGKIQKFVLRSMAKG 542
>gi|220922067|ref|YP_002497368.1| AMP-dependent synthetase and ligase [Methylobacterium nodulans ORS
2060]
gi|219946673|gb|ACL57065.1| AMP-dependent synthetase and ligase [Methylobacterium nodulans ORS
2060]
Length = 543
Score = 359 bits (922), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 197/449 (43%), Positives = 269/449 (59%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-HDDVSATSSP- 62
RLD ++ L H E+K+L D + + AL+ KP++I +DD T
Sbjct: 104 RLDPAVLAFCLDHGEAKVLITDREFARTIKPALA-----QAKVKPLVIDYDDPEFTGEGE 158
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P+ W P EWD ++LNYTSGTT PKGVV+ HRG ++ V ++
Sbjct: 159 RLGTVEYEEFLASGDPDHAWAMPRDEWDAISLNYTSGTTGDPKGVVYHHRGAALLAVGNV 218
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ + PV+LWTLPMFH NGW + W ++ V GT++CLR+V +Y I H VTH+C
Sbjct: 219 VTGALGKHPVYLWTLPMFHCNGWCFPWTLSVVAGTHVCLRQVRAKAMYDAIADHRVTHLC 278
Query: 172 GALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V+ +L + +P + L V T+ A PP AVL GF V+H YGLTET G
Sbjct: 279 GAPIVMQLLLNAPAPERRSLPHRVSFFTAAAPPPEAVLAGMAEAGFDVTHLYGLTETYGP 338
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V W + W+ L E+A KARQGVR L +DV+ PET V DGQ+ GE++FR
Sbjct: 339 AVVNEWHADWDALTKPEQAARKARQGVRYPPLEALDVLDPETMQPVPADGQTLGEVMFRG 398
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + + R WF++GD+GV H DGY+++KDRSKD+IISGGENISS EV
Sbjct: 399 NVVMRGYLKNPKATEEAFR-GGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEV 457
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L+ +PA+ A+VA+ D+ WG+ PCAFV LK S+ + E +I +CR L Y
Sbjct: 458 EEALFKHPAVAAAAVVAKPDEKWGETPCAFVELKG--SEMVSAEELIGWCRQSLAGYKVP 515
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K V+ ELPKT+TGKIQKF+LRE+ A+
Sbjct: 516 KHVVFT-ELPKTSTGKIQKFILREMAKAL 543
>gi|359788674|ref|ZP_09291645.1| acyl-CoA synthetase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255466|gb|EHK58376.1| acyl-CoA synthetase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 546
Score = 359 bits (921), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/452 (42%), Positives = 263/452 (58%), Gaps = 25/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD ++ L H+E+K+L VD + S + AL+L + P + D A +P
Sbjct: 102 RLDAAVIAFQLDHAETKVLIVDREFSTVTKEALAL---AKVRPLVIDYDDPEYAADAPYP 158
Query: 63 --------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
+ G P F W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++
Sbjct: 159 KGERIGSLDYEEFVSSGDPEFSWSMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALMAY 218
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
++ I + P +LWTLPMFH NGW + W +A GT++CLR V +Y I HGVT
Sbjct: 219 ANTIHAGMGKHPAYLWTLPMFHCNGWCFPWTLAVQAGTHVCLRWVRAKAMYDAIADHGVT 278
Query: 169 HICGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+CGA +V++ L +P + P V T+ A PP AVL GF V+H YGLTET
Sbjct: 279 HLCGAPIVMSTLIDAPDADKREFPQTVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLTET 338
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G V W + W+ L R KARQGVR L + V+ PET + DG++ GE++
Sbjct: 339 YGPAVVNEWHAGWDALDKGPRTARKARQGVRYAALEALTVLDPETMEATPADGETIGEVM 398
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
FR +M GYLK++ + WF++GD+GV+H DGY+++KDRSKD+IISGGENISS
Sbjct: 399 FRGNIVMKGYLKNRPATDEAFA-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISS 457
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
EVE LY +PA+ +VA+ D WG+ P A+V LK K TE IIE CR L +
Sbjct: 458 IEVEDALYKHPAVASCGVVARPDDKWGETPVAYVELK--PGKAATESEIIEHCRTLLARF 515
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
++VI E+PKT+TGK+QKF LRE+ A+
Sbjct: 516 KCPRTVIFA-EIPKTSTGKMQKFRLRELAKAL 546
>gi|90418914|ref|ZP_01226825.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligases II [Aurantimonas
manganoxydans SI85-9A1]
gi|90336994|gb|EAS50699.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligases II [Aurantimonas
manganoxydans SI85-9A1]
Length = 543
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/449 (42%), Positives = 268/449 (59%), Gaps = 23/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSL--------------FPSNTILPK-P 49
RLD ++ L HSE++++ VD + S + AL FP++ + K P
Sbjct: 101 RLDADIIAFQLDHSEARVVLVDREFSGVMAKALKKAKVTPLVVDYDDPDFPADAPVAKGP 160
Query: 50 VLIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
+ D A + G P++ W P EWD ++LNYTSGTT +PKGVV+ HRG ++ +
Sbjct: 161 AIGSLDYEALVAE--GDPDYAWHMPNDEWDAISLNYTSGTTGNPKGVVYHHRGAALMGYA 218
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
++I + PV+LWTLPMFH NGW + W +A GT++CLR V ++ + HGVTH
Sbjct: 219 NVIASGMGRYPVYLWTLPMFHCNGWCFPWTLAVQAGTHVCLRWVRARAMFDALADHGVTH 278
Query: 170 ICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
+CGA VV+ L + + + D+ V T+ A PP +VL GF V+H YGLTET
Sbjct: 279 LCGAPVVMATLINADAGDKRDFDQTVTFNTAAAPPPQSVLSGMRDAGFEVTHLYGLTETY 338
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G V WK +WN L RA ARQGVR L D+ V+H ET DG++ GE++F
Sbjct: 339 GPAVVNEWKDEWNALDGPARAAQTARQGVRYPALEDLAVMHSETMEKTPADGETIGEVMF 398
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R +M GYLK+ E S+ R WF++GD+GV+H DGY+E+KDR+KD+IISGGENISS
Sbjct: 399 RGNIVMRGYLKNPEASAEAFR-GGWFHSGDLGVLHEDGYIELKDRAKDIIISGGENISSI 457
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE LY +P + A+VA+ D+ WG+ P AFV LK + TE +I CR RL +
Sbjct: 458 EVEDALYQHPDVATAAVVAKPDEKWGETPLAFVELK--PGRSVTEADLIAHCRERLARFK 515
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREIVN 436
K + + E+PKT+TGKIQK+VLR+ +
Sbjct: 516 CPKEIRFQ-EVPKTSTGKIQKYVLRKAIG 543
>gi|381197129|ref|ZP_09904470.1| acyl-CoA synthetase [Acinetobacter lwoffii WJ10621]
Length = 547
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 201/444 (45%), Positives = 284/444 (63%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDV---SATSS 61
RLD K ++ +L H+E+K+L VD + + +A AL+L + V+ DD + ++
Sbjct: 101 RLDAKTIAFMLDHAETKVLLVDPEFASVAQEALALVGRDIF----VIDVDDAEYENCFAA 156
Query: 62 P----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
P T G NF+W P+ EWD ++LNYTSGTT +PKGVV+ HRG +I S++
Sbjct: 157 PIGQIEYEDWLTEGDENFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNI 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I + + +LWTLP+FH NGW ++W MAA GGTNICLRK+D +I+ +I H V + C
Sbjct: 217 IACGMTPRATYLWTLPLFHCNGWCFAWTMAANGGTNICLRKIDPELIFKLITEHKVDYFC 276
Query: 172 GALVVLNMLSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VL+ML ++P + + + V+++ +GA+PPAA++ +G V+H YGLTET G
Sbjct: 277 GAPIVLSMLINTPEEQRIHFEHRVEVMVAGAAPPAAIIEGMRHIGINVTHVYGLTETYGP 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
CA ++ W+ L+ E+A+L +RQGV M V+ P+T V HDGQ+ GEI+FR
Sbjct: 337 SALCASQAGWSDLSIQEQAQLHSRQGVPYPLQDGMKVLDPDTMQPVPHDGQTMGEIMFRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ E ++ WF+TGD+ V DGY +I DRSKDVIISGGENISS EV
Sbjct: 397 NIVMKGYLKNPEATAEAFT-GGWFHTGDLAVCQPDGYAKITDRSKDVIISGGENISSLEV 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E +LY +PAI A+VA+ D W + PCAF+ LK K+ T E IIEFC+ L +
Sbjct: 456 EEILYQHPAILTAAVVAKPDPRWQEVPCAFIELK--AGKETTPEEIIEFCKQHLARFKVP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K V+I E+PKT+TGK+QKFVLR+
Sbjct: 514 KDVVI-TEIPKTSTGKLQKFVLRD 536
>gi|399992396|ref|YP_006572636.1| acyl-CoA synthetase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398656951|gb|AFO90917.1| acyl-CoA synthetase [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 542
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 271/449 (60%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD V+ + H E+K++ VD Q L LA + + + P + + DD + S P
Sbjct: 103 RLDVSTVAYIFDHGEAKVVLVDSQF--LTLAEEAKAACDGLGPLIIEVPDDQA--SYPAS 158
Query: 65 G-HP-----------NFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G HP +F W+ P+ EW+ +ALNYTSGTT PKGVV+ HRG +++T+ ++I
Sbjct: 159 GRHPIYEDILAAAAHDFDWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ QP +L +P+FH NGW+++W M +GGT IC R + P IY I G TH G
Sbjct: 219 SWRMVMQPKYLAIVPLFHCNGWNHTWMMPVLGGTLICCRDITAPAIYGAIADEGATHFGG 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML ++ + D V++ T+GA P A L + E+LGF V+ YGLTET G V
Sbjct: 279 APIVLNMLVNAAEEDRRQFDHTVEVFTAGAPPAPATLEKIEALGFHVTQVYGLTETYGHV 338
Query: 231 VSCAWKSQ-WNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C WK W+TL RA +KARQGV + D V + + +GQ QGEIV R
Sbjct: 339 TECLWKGDSWDTLDQQGRAAIKARQGV-AFPMMDHITVMRDDMQQIAMNGQDQGEIVMRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
S+M GYLK+ + ++ + +F++GDI V H DGY++I DR+KD+IISGGENISS EV
Sbjct: 398 NSVMKGYLKNPDATAEAFQ-GGYFHSGDIAVQHPDGYIQIADRAKDIIISGGENISSVEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VL +P +N A+VA+ D WG+ PCAFV LK + P + +I F R L + A
Sbjct: 457 EGVLMGHPDVNLAAVVAKPDDKWGEVPCAFVELKPGATVDPAD--LIRFARETLAGFKAP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K V+ + ELPKT+TGKIQKF LR+ A+
Sbjct: 515 KQVVFQ-ELPKTSTGKIQKFELRQQAKAL 542
>gi|126740722|ref|ZP_01756408.1| AMP-dependent synthetase and ligase [Roseobacter sp. SK209-2-6]
gi|126718237|gb|EBA14953.1| AMP-dependent synthetase and ligase [Roseobacter sp. SK209-2-6]
Length = 542
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 201/450 (44%), Positives = 274/450 (60%), Gaps = 26/450 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH--DDVS---AT 59
RLD V+ + H E+K+ VD Q LA AA+ P P+LI DD + AT
Sbjct: 103 RLDVSTVAYIFDHGEAKVALVDPQFLELAEAAIEEMEG----PAPILIEVADDPAGWHAT 158
Query: 60 SSPTV-------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F W+ P+ EW+ +ALNYTSGTT PKGVV+ HRG +++T+ +++
Sbjct: 159 GRHKTYVDLLAEGDPEFDWILPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVV 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ PV+L +P+FH NGW+++W M +GGT +C R V +Y+ I + GVTH G
Sbjct: 219 SWRMVQHPVYLTIVPLFHCNGWNHTWMMPLLGGTLVCCRDVSAQNVYNAIHYEGVTHFGG 278
Query: 173 ALVVLNMLSSS--PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNM+ ++ + D V++ T+GA P A L + E LGF ++H YGLTET G V
Sbjct: 279 APIVLNMIVNALDEERRTFDHQVEVFTAGAPPAPATLAKIEDLGFNITHVYGLTETFGHV 338
Query: 231 VSCAWKSQ-WNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C WK+Q W L A KARQGV + + + VV + DGQSQGEI R
Sbjct: 339 TECYWKAQDWADLDQAGIAAKKARQGV-AMPMMEPVVVRGSDHEILPMDGQSQGEIALRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GYLK+ E ++ + +F +GD+ V H+DGY++I DR+KD+IISGGENISS EV
Sbjct: 398 NTVMKGYLKNPEATAEAFK-GGYFNSGDLAVQHADGYIQIADRAKDIIISGGENISSVEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMA 408
E VL +PA+N A+VA+ D+ WG+ PCAFV LK + K EEA +I F R L + A
Sbjct: 457 EGVLMGHPAVNLAAVVAKPDEKWGEVPCAFVELK---AGKTLEEAELIAFSRETLAGFKA 513
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAV 438
K VI + ELPKT+TGKIQKF LR I A+
Sbjct: 514 PKQVIFQ-ELPKTSTGKIQKFELRGIAKAL 542
>gi|374364646|ref|ZP_09622747.1| acyl-CoA synthetase [Cupriavidus basilensis OR16]
gi|373103778|gb|EHP44798.1| acyl-CoA synthetase [Cupriavidus basilensis OR16]
Length = 545
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/446 (43%), Positives = 268/446 (60%), Gaps = 21/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + +L H E+++L D + + LA + P + V + D + +P
Sbjct: 102 RLDASNLIFMLRHGEARVLLADTEFAGLARQIANEIPGLKV----VAVVDALGPQDAPAF 157
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W P EWD +ALNYTSGTT PKGVV+ HRG I +S++++
Sbjct: 158 GETDYERLLASGDPEFAWQMPADEWDAIALNYTSGTTGDPKGVVYHHRGAAINAISNILE 217
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P V+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ GVTH C A
Sbjct: 218 WDLPKHAVYLWTLPMFHCNGWCFPWTIAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAA 277
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V L ++P + L PV+ + +GA PPAAVL + E++GF ++H YGLTET G
Sbjct: 278 PIVHTALVNAPPAWREGLRGPVRGMVAGAPPPAAVLAQMEAMGFALTHVYGLTETYGPAA 337
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA + W +L+ +RA KARQGVR ++ V+ P+T V DG+ GEI+FR
Sbjct: 338 VCAEQDDWASLSQEDRATKKARQGVRYHLQTEVAVLDPDTMQPVASDGEEIGEIMFRGNI 397
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
M GYLK+++ + WF+TGD+GV DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 398 CMKGYLKNEKATREAFA-GGWFHTGDLGVCTPDGYVKIKDRSKDIIISGGENISSVEVED 456
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
+Y +PA+ VA+VAQ D WG+ PCAFV LK S T E +I CR L + K+
Sbjct: 457 AIYRHPAVLAVAVVAQPDVKWGETPCAFVELKDGASA--TAEELIAHCRTLLAGFKVPKA 514
Query: 412 VIIEDELPKTATGKIQKFVLREIVNA 437
V LPKT+TGKIQKF LR+ V +
Sbjct: 515 VYF-GPLPKTSTGKIQKFELRKKVKS 539
>gi|149923644|ref|ZP_01912041.1| acyl-CoA synthase [Plesiocystis pacifica SIR-1]
gi|149815511|gb|EDM75047.1| acyl-CoA synthase [Plesiocystis pacifica SIR-1]
Length = 559
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/449 (43%), Positives = 270/449 (60%), Gaps = 28/449 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH------DDVSA 58
RLD + ++ L H E+K + V+ + + + AL+L P+P++I D +
Sbjct: 108 RLDARIIAFSLDHGEAKAILVERELATVVREALALMEG----PRPLVIDYVDPTVDYAAI 163
Query: 59 TSSP------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
+P G P F WV+P EWD +ALNYTSGTT PKGVV HRG +++
Sbjct: 164 EGAPDPFGELEFAELLAEGDPAFDWVRPLDEWDAIALNYTSGTTGDPKGVVFHHRGAYLL 223
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+++ + PV+LWTLPMFH NGW + W +A V GT++CLR V I+ + H
Sbjct: 224 ATGNVVTTGMTKHPVYLWTLPMFHCNGWCFPWSLAIVAGTHVCLRAVRDAAIWDAVADHE 283
Query: 167 VTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH+CGA +V+ ++S + +PLDR V+ T+GA PP AVL + GF V+H YGLT
Sbjct: 284 VTHMCGAPIVMAVISGAADAIKRPLDRVVEFFTAGAPPPEAVLATMAAGGFNVTHLYGLT 343
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
E+ G V WK+ W+ L RA +KARQGVR L + V+ PET V DG++ GE
Sbjct: 344 ESYGPAVVNDWKASWDALDPGPRAAMKARQGVRYQALEQLTVMDPETMTEVAADGETLGE 403
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++ R IM GYLK+ + WF+TGD+GV+H DGY+++KDRSKD+IISGGENI
Sbjct: 404 VMMRGNVIMKGYLKNPAATQRAFAQG-WFHTGDLGVMHPDGYVQLKDRSKDIIISGGENI 462
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE LY +PAI A+VA WG+ PCAFV L+ ++ + E +I + R +L
Sbjct: 463 SSIEVEDALYKHPAIAAAAVVAMPHGKWGETPCAFVELR--AGQELSAEEVIAWSREQLA 520
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
H+ + V+ ELPKT+TGKIQKF LRE
Sbjct: 521 HFKCPRHVVF-GELPKTSTGKIQKFKLRE 548
>gi|94314687|ref|YP_587896.1| acyl-CoA synthetase [Cupriavidus metallidurans CH34]
gi|93358539|gb|ABF12627.1| AMP-dependent synthetase and ligase; putative
o-succinylbenzoate-CoA ligase [Cupriavidus metallidurans
CH34]
Length = 544
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/437 (44%), Positives = 264/437 (60%), Gaps = 12/437 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA------LAALSLFPSNTILPKPVLIHDDVSA 58
RLD + +L H E+K+L D + + A + L + +L D
Sbjct: 102 RLDAANLVFMLRHGEAKVLLADTEFADAARQMAREVRGLKVIAVEDVLGPDAERFGDTDY 161
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
S G P F W P EWD +ALNYTSGTT PKGVV+ HRG + +S++++W +
Sbjct: 162 ESFLASGDPEFDWKMPGDEWDAIALNYTSGTTGDPKGVVYHHRGAAMNAISNILEWDMAK 221
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
PV+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ GVTH C A +V
Sbjct: 222 HPVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHT 281
Query: 179 MLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
L ++P + + L PV+ + +GA PPAAVL + E++GF +SH YGLTE G CA +
Sbjct: 282 ALVNAPPSWREGLRGPVRGMVAGAPPPAAVLAQMEAMGFDLSHVYGLTEVYGPAAVCAEQ 341
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
W+T++ ERA LKARQGVR + + V+ P+T V DG++ GEI+FR M GY
Sbjct: 342 DAWHTVSQEERAVLKARQGVRYHLQSGVTVLDPDTMQPVPRDGETIGEIMFRGNICMKGY 401
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
LK+ + + WF+TGD+GV DGY++IKDRSKD+IISGGENISS EVE LY +
Sbjct: 402 LKNDKATREAFA-GGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRH 460
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
PA+ A+VAQ D WG+ PCAFV LK S T E +I CR L + K+V
Sbjct: 461 PAVLAAAVVAQPDAKWGETPCAFVELKDGASV--TAEELIAHCRTLLAGFKVPKAVYF-G 517
Query: 417 ELPKTATGKIQKFVLRE 433
LPKT+TGKIQKF LR+
Sbjct: 518 PLPKTSTGKIQKFELRK 534
>gi|430810754|ref|ZP_19437866.1| acyl-CoA synthetase, partial [Cupriavidus sp. HMR-1]
gi|429496761|gb|EKZ95322.1| acyl-CoA synthetase, partial [Cupriavidus sp. HMR-1]
Length = 491
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/437 (44%), Positives = 264/437 (60%), Gaps = 12/437 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA------LAALSLFPSNTILPKPVLIHDDVSA 58
RLD + +L H E+K+L D + + A + L + +L D
Sbjct: 49 RLDAANLVFMLRHGEAKVLLADTEFADAARQMAREVRGLKVIAVEDVLGPDAERFGDTDY 108
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
S G P F W P EWD +ALNYTSGTT PKGVV+ HRG + +S++++W +
Sbjct: 109 ESFLASGDPEFDWKMPGDEWDAIALNYTSGTTGDPKGVVYHHRGAAMNAISNILEWDMAK 168
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
PV+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ GVTH C A +V
Sbjct: 169 HPVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFEPKLVFDLMRDEGVTHYCAAPIVHT 228
Query: 179 MLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
L ++P + + L PV+ + +GA PPAAVL + E++GF +SH YGLTE G CA +
Sbjct: 229 ALVNAPPSWREGLRGPVRGMVAGAPPPAAVLAQMEAMGFDLSHVYGLTEVYGPAAVCAEQ 288
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
W+T++ ERA LKARQGVR + + V+ P+T V DG++ GEI+FR M GY
Sbjct: 289 DSWHTVSQEERAVLKARQGVRYHLQSGVTVLDPDTMQPVPRDGETIGEIMFRGNICMKGY 348
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
LK+ + + WF+TGD+GV DGY++IKDRSKD+IISGGENISS EVE LY +
Sbjct: 349 LKNDKATREAFA-GGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDALYRH 407
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
PA+ A+VAQ D WG+ PCAFV LK S T E +I CR L + K+V
Sbjct: 408 PAVLAAAVVAQPDAKWGETPCAFVELKDGASV--TAEELIAHCRTLLAGFKVPKAVYF-G 464
Query: 417 ELPKTATGKIQKFVLRE 433
LPKT+TGKIQKF LR+
Sbjct: 465 PLPKTSTGKIQKFELRK 481
>gi|386395314|ref|ZP_10080092.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
gi|385735940|gb|EIG56136.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Bradyrhizobium sp. WSM1253]
Length = 549
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 270/442 (61%), Gaps = 22/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA------ 58
RLD ++ L H +K++ VD + S + ALS PKP +I D +A
Sbjct: 105 RLDAPSIAFQLDHGGAKIILVDPEFSGVITDALSQMSG----PKPFVIDVDDAAFKGGGR 160
Query: 59 ------TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ G P+F + P EWD +AL+YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGEIEYEAALAQGDPDFAAILPGDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
++ PV+LWTLPMFH NGW + W +AA G N+CLRKV+ I+ +IK HGVTH+CG
Sbjct: 221 AGQLGQHPVYLWTLPMFHCNGWCFPWTIAAAAGINVCLRKVEPTKIFELIKQHGVTHMCG 280
Query: 173 ALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P R V L +GA+PP AVL ES+G ++H YGLTE G
Sbjct: 281 APIVYNTLINAPDAPKGGAARHVVGLIAGAAPPVAVLEGAESIGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERA LK RQGV + V+ P+T V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDDLPAAERASLKRRQGVPYPLEEAVTVIDPQTMRQVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + + + WF+TGD+GV+ + GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 401 IVMKGYLKNDKATKEAF-EGGWFHTGDLGVLDAHGYVIIKDRSKDIIISGGENISSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAFV LK S +E II FCR+ + + K
Sbjct: 460 DILYKHPAVLFAAVVAKPDPKWGEVPCAFVELKDGASA--SEADIIAFCRSHMSGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
+V+ +PKT+TGKIQKF+LR
Sbjct: 518 AVVF-GPIPKTSTGKIQKFLLR 538
>gi|118161408|gb|ABK64089.1| putative AMP-dependent synthetase and ligase [Janthinobacterium
lividum]
Length = 544
Score = 358 bits (918), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 182/437 (41%), Positives = 268/437 (61%), Gaps = 12/437 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA------LAALSLFPSNTILPKPVLIHDDVSA 58
RLD ++ +L H ++K+L D + + LA + L + N +L V ++
Sbjct: 102 RLDLASLTFMLRHGQAKVLLADTEFAELARQMAAQIPGLRVIQVNDVLGPEVEPFAELDY 161
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
+ G P + W P EWD +ALNYTSGTT PKGVV+ HRG + +S++++W +P
Sbjct: 162 ETLLASGDPGYDWQPPADEWDAIALNYTSGTTGDPKGVVYHHRGAALNALSNILEWDMPK 221
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
V+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ +TH C A +V
Sbjct: 222 HAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFEPKLVFDLMRELRITHYCAAPIVHA 281
Query: 179 MLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
L+++P+ +D V+ + +GA PPAA++ + E++GF + HSYGLTE G CA +
Sbjct: 282 ALANAPANWRDGIDWTVRGMVAGAPPPAAMVAKIEAMGFDLIHSYGLTEVYGPAAICAEQ 341
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
+W L+ ERA LK+RQGVR + + V+ PET V DG+ GEI+FR M GY
Sbjct: 342 DEWAALSQEERAVLKSRQGVRYHLQSAVAVLDPETMQPVAADGEQIGEIMFRGNICMKGY 401
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
LK++ + WF+TGD+GV++ DGY+++KDRSKD+IISGGENISS EVE LY +
Sbjct: 402 LKNERATQEAFA-GGWFHTGDLGVMYPDGYIKLKDRSKDIIISGGENISSVEVEDALYHH 460
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
P + A++AQ D+ WG+ PCAFV L+ TE +I FC+ L + K++
Sbjct: 461 PQVLAAAVIAQPDEKWGETPCAFVELR--EGGTVTEAELIAFCKNNLAGFKVPKAIYF-G 517
Query: 417 ELPKTATGKIQKFVLRE 433
LP+T+TGKIQKF LR+
Sbjct: 518 PLPRTSTGKIQKFELRK 534
>gi|86749801|ref|YP_486297.1| acyl-CoA synthetase [Rhodopseudomonas palustris HaA2]
gi|86572829|gb|ABD07386.1| AMP-dependent synthetase and ligase [Rhodopseudomonas palustris
HaA2]
Length = 549
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/449 (43%), Positives = 270/449 (60%), Gaps = 22/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--------- 55
RLD ++ L H +K++ VD + S + AL PKP++I D
Sbjct: 105 RLDAPAIAFQLEHGGAKIILVDPEFSAVIADALKQMKG----PKPLVIDVDDKMFPGHHR 160
Query: 56 ---VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ + G P F +P+ EWD +AL YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGELEYEYAVASGDPCFVGQRPQDEWDAIALGYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ + PV+LWTLPMFH NGW + W +AA G N+CLRKVD I+ +I HGVTH+ G
Sbjct: 221 AANLGSHPVYLWTLPMFHCNGWCFPWTIAAAAGVNVCLRKVDPAKIFDLIPRHGVTHMSG 280
Query: 173 ALVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P RPV L +GA+PP AVL E +G ++H YGLTE G
Sbjct: 281 APIVYNALINAPEAPKGAAARPVVGLIAGAAPPVAVLAGAEQVGIKLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERA+LK RQGV + V+ PET V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDDLPVAERAQLKRRQGVPYPLQEAVTVLDPETMQEVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + + WF+TGD+GV+ + GY+ IKDRSKD+IISGGEN+SS EVE
Sbjct: 401 IVMKGYLKNEKATKEALA-GGWFHTGDLGVLDAHGYVIIKDRSKDIIISGGENVSSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PAI A+VA+ D WG+ PCAFV LK S +E II +CR LP + K
Sbjct: 460 DVLYKHPAILFAAVVAKPDPKWGEVPCAFVELKDGASA--SEAEIIAYCREHLPGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAVN 439
+++ +PKT+TGKIQKF+LR+ V +
Sbjct: 518 TIVF-SAIPKTSTGKIQKFMLRDQVKSAK 545
>gi|194291808|ref|YP_002007715.1| acyl-CoA synthetase [Cupriavidus taiwanensis LMG 19424]
gi|193225712|emb|CAQ71658.1| putative AMP-dependent synthetase and ligase [Cupriavidus
taiwanensis LMG 19424]
Length = 557
Score = 357 bits (917), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 271/445 (60%), Gaps = 20/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + +L H E+++L D + + LA P + + +HD + ++P
Sbjct: 115 RLDAANLLFMLRHGEARVLLADTEFADLARQMALELPGLKV----IAVHDVLGPQATPFG 170
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P + W P EWD +ALNYTSGTT PKGVV+ HRG I VS++++W
Sbjct: 171 DTDYEAFLDGGDPAYAWQMPADEWDAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEW 230
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P PV+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ GVTH C A
Sbjct: 231 DLPKHPVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFEPRLVFDLMREEGVTHYCAAP 290
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+V L ++P+ + + PV+ + +GA PPAAVL + E++GF ++H YGLTE G
Sbjct: 291 IVHTALVNAPTAWREGVRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAV 350
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA + W++L++ +RA KARQGVR + + V+ P++ V DG++ GEI+FR
Sbjct: 351 CAEQDDWSSLSEQDRAVKKARQGVRYHLQSQVAVLDPDSMQPVPADGETIGEIMFRGNIC 410
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+++ + WF+TGD+GV DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 411 MKGYLKNEKATREAFA-GGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDA 469
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ A+VAQ D WG+ PCAFV LK S + E +I CR L + K+V
Sbjct: 470 LYRHPAVLAAAVVAQPDAKWGETPCAFVELKDGASV--SAEDLIAHCRTLLAGFKVPKAV 527
Query: 413 IIEDELPKTATGKIQKFVLREIVNA 437
LPKT+TGKIQKF LR V +
Sbjct: 528 YF-GPLPKTSTGKIQKFELRRKVKS 551
>gi|262369847|ref|ZP_06063174.1| acyl-CoA synthetase [Acinetobacter johnsonii SH046]
gi|262314886|gb|EEY95926.1| acyl-CoA synthetase [Acinetobacter johnsonii SH046]
Length = 547
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 200/444 (45%), Positives = 283/444 (63%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDV---SATSS 61
RLD K ++ +L H+E+K+L VD + + +A AL+L + V+ DD + ++
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFASVAQEALALVKRDIF----VIDVDDAEYENCFAA 156
Query: 62 P----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
P T G NF+W P+ EWD ++LNYTSGTT +PKGVV+ HRG +I S++
Sbjct: 157 PIGQIEYEDWLTEGDENFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNI 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I + + +LWTLP+FH NGW ++W MAA GGTNICLRK+D + + +I H V + C
Sbjct: 217 IACGMTPRATYLWTLPLFHCNGWCFAWTMAANGGTNICLRKIDPELTFKLIAEHKVDYFC 276
Query: 172 GALVVLNMLSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VL+ML ++P + + + V+++ +GA+PPAA++ +G V+H YGLTET G
Sbjct: 277 GAPIVLSMLINTPEEQRIHFEHRVEVMVAGAAPPAAIIEGMRHIGINVTHVYGLTETYGP 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
CA ++ W+ L+ E+A+L +RQGV M V+ P+T V HDGQ+ GEI+FR
Sbjct: 337 SALCASQAGWSDLSIQEQAQLHSRQGVPYPLQDGMKVLDPDTMQPVPHDGQTMGEIMFRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ E ++ WF+TGD+ V DGY +I DRSKDVIISGGENISS EV
Sbjct: 397 NIVMKGYLKNPEATAEAFA-GGWFHTGDLAVCQPDGYAKITDRSKDVIISGGENISSLEV 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E +LY +PAI A+VA+ D W + PCAF+ LK K+ T E IIEFC+ L +
Sbjct: 456 EEILYQHPAILTAAVVAKPDPRWQEVPCAFIELK--AGKETTPEEIIEFCKQHLARFKVP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K V+I E+PKT+TGK+QKFVLR+
Sbjct: 514 KDVVI-TEIPKTSTGKLQKFVLRD 536
>gi|73538138|ref|YP_298505.1| acyl-CoA synthetase [Ralstonia eutropha JMP134]
gi|72121475|gb|AAZ63661.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 544
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 191/441 (43%), Positives = 268/441 (60%), Gaps = 12/441 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA------LAALSLFPSNTILPKPVLIHDDVSA 58
RLD + +L H E+++L D + + LA + L + L D
Sbjct: 102 RLDAANLVFMLRHGEARVLLADTEFADLARQMALEIPGLKVIAVEDALGPQAERFGDTDY 161
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
S G P + W P+ EWD +ALNYTSGTT PKGVV+ HRG + +S++++W +P
Sbjct: 162 ESFLASGDPEYAWKMPDDEWDAIALNYTSGTTGDPKGVVYHHRGAAMNAISNILEWDLPK 221
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
PV+LWTLP+FH NGW + W +AA G N+CLRK + +++ +++ GVTH C A +V
Sbjct: 222 HPVYLWTLPLFHCNGWCFPWTIAARAGVNVCLRKFEPRLVFDLMRDEGVTHYCAAPIVHT 281
Query: 179 MLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
L ++P + + L PV+ + +GA PPAAVL + E++GF ++H YGLTE G CA +
Sbjct: 282 ALVNAPPSWREGLRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAVCAEQ 341
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
W++L+ ERA KARQGVR + + V+ P++ V DG++ GEI+FR M GY
Sbjct: 342 DGWDSLSQEERAVKKARQGVRYHLQSGVAVLDPDSMQPVPADGETIGEIMFRGNICMKGY 401
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
LK+++ + WF+TGD+GV +DGY++IKDRSKD+IISGGENISS EVE LY +
Sbjct: 402 LKNEKATREAFA-GGWFHTGDLGVCMADGYIKIKDRSKDIIISGGENISSVEVEDALYRH 460
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
PA+ A+VAQ D WG+ PCAFV LK S T E ++ CR L + K+V
Sbjct: 461 PAVLAAAVVAQPDAKWGETPCAFVELKDGASA--TAEELMAHCRTLLAGFKVPKAVYF-G 517
Query: 417 ELPKTATGKIQKFVLREIVNA 437
LPKT+TGKIQKF LR V +
Sbjct: 518 PLPKTSTGKIQKFELRRKVKS 538
>gi|262374882|ref|ZP_06068116.1| O-succinylbenzoate-CoA ligase [Acinetobacter lwoffii SH145]
gi|262309895|gb|EEY91024.1| O-succinylbenzoate-CoA ligase [Acinetobacter lwoffii SH145]
Length = 437
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 198/433 (45%), Positives = 275/433 (63%), Gaps = 20/433 (4%)
Query: 14 LLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTVGH------- 66
+L H+ESK+L VD + + LA AL+L + + + + D +G
Sbjct: 1 MLEHAESKVLLVDPEFTALATEALALVSQDIYV---IDVADAEFEGEDQRIGQIEYEDWI 57
Query: 67 ----PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
NF+W P+ EWD ++L+YTSGTT +PKGVV+ HRG +I S++I + + +
Sbjct: 58 AQGDANFEWHLPQDEWDAISLSYTSGTTGNPKGVVYHHRGAYINAASNIIACGMTPRATY 117
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSS 182
LWTLP+FH NGW ++W MAA GGTN+CLRKVD +I+ +I H V + CGA +VL+ML +
Sbjct: 118 LWTLPLFHCNGWCFAWTMAANGGTNVCLRKVDAELIFKLIAEHKVDYFCGAPIVLSMLIN 177
Query: 183 SPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWN 240
+P K +D V+++ +GA+PPAA++ ++G V+H YGLTET G CA ++ W+
Sbjct: 178 TPEEKKTKIDHRVEVMVAGAAPPAAIIEGMRNIGINVTHVYGLTETYGPSALCASQAGWS 237
Query: 241 TLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQ 300
L+ E+A+L +RQGV M V+ P+T V HDGQ+ GEI+FR +M GYLK+
Sbjct: 238 DLSIQEQAQLHSRQGVPYPLQDGMKVLDPDTMQEVPHDGQTMGEIMFRGNIVMKGYLKNP 297
Query: 301 EGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAIN 360
E ++ WF+TGD+ V DGY +I DRSKDVIISGGENISS EVE VLY +PA+
Sbjct: 298 EATAEAFA-GGWFHTGDLAVCQPDGYAKITDRSKDVIISGGENISSLEVEEVLYQHPAVL 356
Query: 361 EVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPK 420
A+VA+ D W + PCAF+ LK K TEE I+EFCR L + K V+I E+PK
Sbjct: 357 TAAVVAKPDPRWQEVPCAFIELK--EGTKATEEEIMEFCREHLARFKVPKDVVI-TEIPK 413
Query: 421 TATGKIQKFVLRE 433
T+TGK+QKFVLRE
Sbjct: 414 TSTGKLQKFVLRE 426
>gi|255320854|ref|ZP_05362028.1| acyl-CoA synthetase [Acinetobacter radioresistens SK82]
gi|262380253|ref|ZP_06073408.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
gi|255302023|gb|EET81266.1| acyl-CoA synthetase [Acinetobacter radioresistens SK82]
gi|262298447|gb|EEY86361.1| cyclohexanecarboxylate-CoA ligase [Acinetobacter radioresistens
SH164]
Length = 547
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 202/444 (45%), Positives = 285/444 (64%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDV---SATSS 61
RLD K ++ +L H+ESK+L VD + S LA AL+L + V+ DD + ++
Sbjct: 101 RLDAKTLAFMLEHAESKVLLVDPEFSTLAKEALALVSQDIY----VIDVDDAEYENCFNA 156
Query: 62 P----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
P T G+ +F+W P+ EWD ++LNYTSGTT +PKGVV+ HRG +I S++
Sbjct: 157 PIGEIEYEDWLTEGNADFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNI 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I + + +LWTLP+FH NGW ++W MAA GGTN+CLRKVD +I+ +I H V + C
Sbjct: 217 IACGMTPRATYLWTLPLFHCNGWCFAWTMAANGGTNVCLRKVDPELIFKLIAEHKVDYFC 276
Query: 172 GALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VL+ML ++P+ K D V+++ +GA+PPAA++ ++G V+H YGLTET G
Sbjct: 277 GAPIVLSMLINTPAEKRTYFDHRVEVMVAGAAPPAAIIEGMRNIGINVTHVYGLTETYGP 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
CA ++ W+ L E+A+L +RQGV M V+ PET + V +DGQS GEI+FR
Sbjct: 337 SALCASQAGWSDLTIQEQAQLHSRQGVPYPLQDGMKVLDPETMLPVPNDGQSMGEIMFRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ E ++ + WF+TGD+ V DGY +I DR+KDVIISGGENISS EV
Sbjct: 397 NIVMKGYLKNPEATAEAFK-GGWFHTGDLAVCQPDGYAKITDRAKDVIISGGENISSLEV 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ A+VA+ D W + PCAFV LK +S + E + E C+ L +
Sbjct: 456 EEVLYQHPAVLTAAVVAKPDPRWQEVPCAFVELKEGISI--SAEELTEHCKQGLARFKVP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K +II D +PKT+TGK+QKF+LRE
Sbjct: 514 KEIIITD-IPKTSTGKLQKFILRE 536
>gi|384218900|ref|YP_005610066.1| medium-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA
6]
gi|354957799|dbj|BAL10478.1| medium-chain-fatty-acid--CoA ligase [Bradyrhizobium japonicum USDA
6]
Length = 549
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 193/447 (43%), Positives = 272/447 (60%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA------ 58
RLD ++ L H ++++ VD + S + AL+ PKP ++ D +A
Sbjct: 105 RLDAPSIAFQLDHGGARIILVDPEFSTVITDALAQMKG----PKPFVVDVDDAAFKGGKR 160
Query: 59 ------TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ G P+F + P+ EWD +AL+YTSGTT +PKGVV HRG ++ VS+++
Sbjct: 161 IGEIEYEAAVAQGDPDFAAIPPKDEWDAIALSYTSGTTGNPKGVVTHHRGAYLNAVSNIL 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
++ PV+LWTLPMFH NGW + W +AA G N+CLRKV+ I+ +IK HGVTH+CG
Sbjct: 221 AGQLGQHPVYLWTLPMFHCNGWCFPWTIAAAAGINVCLRKVEPTKIFELIKQHGVTHMCG 280
Query: 173 ALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N L ++P R V L +GA+PP AVL E++G ++H YGLTE G
Sbjct: 281 APIVYNTLINAPDAPKGSAARRVVGLIAGAAPPVAVLEGAENIGIRLTHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W+ L ERA +K RQGV + V++P+T V DG++ GE++FR
Sbjct: 341 SVCAEQPGWDDLPAAERASMKRRQGVPYPLEEGVTVINPQTMQEVPRDGETIGEVMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ + + WF+TGD+GV+ GY+ IKDRSKD+IISGGENISS EVE
Sbjct: 401 IVMKGYLKNEKATKEAF-EGGWFHTGDLGVLDEHGYVIIKDRSKDIIISGGENISSVEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+LY +PA+ A+VA+ D WG+ PCAFV LK S E II FCR + + K
Sbjct: 460 DILYKHPAVLFAAVVAKPDPKWGEVPCAFVELKDGASA--IEAEIIAFCRTHMSGFKTPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
+VI +PKT+TGKIQKF+LR V +
Sbjct: 518 AVIF-GPIPKTSTGKIQKFLLRNEVGS 543
>gi|347539968|ref|YP_004847393.1| acyl-CoA synthetase [Pseudogulbenkiania sp. NH8B]
gi|345643146|dbj|BAK76979.1| acyl-CoA synthetase [Pseudogulbenkiania sp. NH8B]
Length = 546
Score = 357 bits (916), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 200/443 (45%), Positives = 269/443 (60%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K+L D + AL+L + KP++I D S +
Sbjct: 104 RLDAESIAFMLRHGEAKVLITDREFCEPVAKALALLDT-----KPLVIDVDDHLFSGGDL 158
Query: 65 ------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F W P EWD ++LNYTSGTT +PKGVV+ HRG ++ V +L
Sbjct: 159 LGETDYEALLREGDPEFAWTLPGDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAVCNLF 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W +P V+LWTLPMFH NGW + W MAA GTN+ LR+VD I++ IK H VTH C
Sbjct: 219 EWGVPRHAVYLWTLPMFHCNGWCFPWAMAANAGTNVFLRRVDPRQIFAQIKQHRVTHYCA 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V NM+ + K ++ V L +GA+PPAAV+ + LGF ++H YGLTET G
Sbjct: 279 APIVHNMMINVADECGKDIEHEVSCLVAGAAPPAAVIEGMQRLGFNITHVYGLTETYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + +W + ER RQGVR M V++PET V DG++ GEI+FR
Sbjct: 339 GVCAKQPEWEGMTLAERTERNGRQGVRYSMQEGMTVMNPETMQPVPADGETMGEIMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + S+ WF+TGD+ V+ DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 399 LVMKGYLKNPDASAEAF-GGGWFHTGDLAVLQPDGYVKIKDRSKDIIISGGENISSLEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ A+VA+ D WG+ CAFV LK TE II++CRA L H+ A K
Sbjct: 458 DVLYRHPAVMSAAVVAKPDTKWGEVTCAFVELK--DGATVTEREIIDYCRAHLAHFKAPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V+ +PKT+TGKIQKF+LR+
Sbjct: 516 QVVF-GPIPKTSTGKIQKFLLRQ 537
>gi|86137390|ref|ZP_01055967.1| AMP-binding protein [Roseobacter sp. MED193]
gi|85825725|gb|EAQ45923.1| AMP-binding protein [Roseobacter sp. MED193]
Length = 547
Score = 357 bits (915), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 195/449 (43%), Positives = 269/449 (59%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD V+ + H +K+ VD + PLA AA+ P+LI D A T
Sbjct: 108 RLDVDTVAYIFDHGGAKVALVDTEFLPLAEAAVERMEGKA----PLLIEVPDPQAGFEAT 163
Query: 64 VGHP-----------NFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
HP +F+W+ P+ EW+ +ALNYTSGTT PKGVV+ HRG +++T+ ++I
Sbjct: 164 GRHPTYEDVLGNAEHDFEWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVI 223
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ PV+L +P+FH NGW+++W M +GGT +C R + IY I HGVTH G
Sbjct: 224 SWRMVMNPVYLAIVPLFHCNGWNHTWMMPVLGGTLVCCRNITPGAIYDAIGDHGVTHFGG 283
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN+L + + D V++ T+GA P A L + E+LGF V+ YGLTET G V
Sbjct: 284 APIVLNLLVNAKEEERRAFDHTVEVFTAGAPPAPATLQKIETLGFHVTQVYGLTETYGHV 343
Query: 231 VSCAWKS-QWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C WK +W+ L RA +KARQGV + D V + + +G QG+IV R
Sbjct: 344 TECLWKGDKWDDLDHQGRAAIKARQGV-AFPMMDHITVLDDDMKQIPKNGTDQGQIVMRG 402
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
S+M GYLK+ E ++ + +F++GDI V H DGY++I DR+KD+IISGGENISS EV
Sbjct: 403 NSVMKGYLKNPEATAEAF-EGGYFHSGDIAVQHPDGYIQIADRAKDIIISGGENISSVEV 461
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VL +PA+N A+VA+ D WG+ PCAFV LK ++ E +I F R + + A
Sbjct: 462 EGVLMGHPAVNLAAVVAKPDDKWGEVPCAFVELK--EGEEVDEAGLIAFARETIAGFKAP 519
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K VI + ELPKT+TGKIQKF LREI ++
Sbjct: 520 KRVIFQ-ELPKTSTGKIQKFELREIAKSI 547
>gi|356519934|ref|XP_003528623.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
ligase-like [Glycine max]
Length = 560
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 196/452 (43%), Positives = 273/452 (60%), Gaps = 31/452 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF--PSNTILPKPVLIHDD------- 55
RL+ ++ +L H + + VD + LA AL ++ + T P +++ D
Sbjct: 102 RLNASTIAFMLGHCSAAAVMVDQEFFYLAEEALKIWSEKAKTFSPPLLIVIGDENCDPKA 161
Query: 56 -VSATSSPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
+ A S + G P + W PE E +AL YTSGTT+SPKGVV HRG +++
Sbjct: 162 LIYAVSKGAIEYEDFLQSGDPEYAWKPPEDEXQSIALGYTSGTTASPKGVVLHHRGAYLM 221
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++S + W + + V+LWT+PMFH NGW Y+W +AA GTNICLRKV +Y I +
Sbjct: 222 SLSGALIWGMTDGAVYLWTVPMFHCNGWCYTWALAARCGTNICLRKVTAKAVYEAIAKYK 281
Query: 167 VTHICGALVVLNMLSSSP---STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
VTH C A VVLN + ++P + PL V++ T GA PP +VL GF V+H YGL
Sbjct: 282 VTHFCAAPVVLNTILNAPPEDTILPLPHVVRVSTGGAPPPPSVLSGMSERGFGVTHVYGL 341
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
+E G V C+WK +W +L +ARL ARQGVR IGL +DVV+ +T V DG++ G
Sbjct: 342 SEVYGPAVYCSWKPEWESLPPETQARLHARQGVRYIGLEYLDVVNAKTMQPVPADGKTVG 401
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
E+V R ++M GYLK+ + + N WF++GD+ V H DGY+EIK RSKD+IISG EN
Sbjct: 402 EVVMRGNAVMKGYLKNPKANEEAFA-NGWFHSGDLAVKHQDGYIEIKARSKDIIISGAEN 460
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTE---EAIIEFCR 400
ISS E+E+ LY +PAI + + DK WG+ PCAFV+LK + K + E +++F R
Sbjct: 461 ISSVEIENTLYSHPAI-----LXRADKKWGESPCAFVTLKPGVDKSNEQRMIEDVLKFSR 515
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
A++P Y KSV+ LPKTATGKIQK +LR
Sbjct: 516 AKMPAYWVPKSVVF-GALPKTATGKIQKHLLR 546
>gi|421854944|ref|ZP_16287327.1| putative acyl-CoA synthetase [Acinetobacter radioresistens DSM 6976
= NBRC 102413]
gi|403189605|dbj|GAB73528.1| putative acyl-CoA synthetase [Acinetobacter radioresistens DSM 6976
= NBRC 102413]
Length = 547
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 202/444 (45%), Positives = 284/444 (63%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDV---SATSS 61
RLD K ++ +L H+ESK+L VD + S LA AL L + V+ DD + ++
Sbjct: 101 RLDAKTLAFMLEHAESKVLLVDPEFSTLAKEALGLVSQDIY----VIDVDDAEYENCFNA 156
Query: 62 P----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
P T G+ +F+W P+ EWD ++LNYTSGTT +PKGVV+ HRG +I S++
Sbjct: 157 PIGEIEYEDWLTEGNADFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNI 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I + + +LWTLP+FH NGW ++W MAA GGTN+CLRKVD +I+ +I H V + C
Sbjct: 217 IACGMTPRATYLWTLPLFHCNGWCFAWTMAANGGTNVCLRKVDPELIFKLIAEHKVDYFC 276
Query: 172 GALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VL+ML ++P+ K D V+++ +GA+PPAA++ ++G V+H YGLTET G
Sbjct: 277 GAPIVLSMLINTPAEKRTYFDHRVEVMVAGAAPPAAIIEGMRNIGINVTHVYGLTETYGP 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
CA ++ W+ L E+A+L +RQGV M V+ PET + V +DGQS GEI+FR
Sbjct: 337 SALCASQAGWSDLTIQEQAQLHSRQGVPYPLQDGMKVLDPETMLPVPNDGQSMGEIMFRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ E ++ + WF+TGD+ V DGY +I DR+KDVIISGGENISS EV
Sbjct: 397 NIVMKGYLKNPEATAEAFK-GGWFHTGDLAVCQPDGYAKITDRAKDVIISGGENISSLEV 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ A+VA+ D W + PCAFV LK +S + E + E C+ L +
Sbjct: 456 EEVLYQHPAVLTAAVVAKPDPRWQEVPCAFVELKEGISI--SAEELTEHCKQGLARFKVP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K +II D +PKT+TGK+QKF+LRE
Sbjct: 514 KEIIITD-IPKTSTGKLQKFILRE 536
>gi|410693566|ref|YP_003624187.1| putative AMP-dependent synthetase/ligase [Thiomonas sp. 3As]
gi|294339990|emb|CAZ88353.1| putative AMP-dependent synthetase/ligase [Thiomonas sp. 3As]
Length = 547
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 271/442 (61%), Gaps = 18/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVL-IHDDVSATSSPT 63
RLD + ++ +L H +K + VD + + + A++L + P V+ + D
Sbjct: 99 RLDAEALAYMLLHGGAKAVLVDPELAAVMQQAVALAVEQGLAPPLVIDVPDPEFVPGGQG 158
Query: 64 VGHPNFKWVQPES-----------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G N++ + E EWD ++LNYTSGTT PKGVV+ HRG ++ VS+++
Sbjct: 159 IGALNYEALLAEGLASEALPDVADEWDSISLNYTSGTTGKPKGVVYSHRGAYVNAVSNIL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W +P PV+LWTLPMFH NGW + W +AA G N+CLRKV+ I+ I+ GVTH CG
Sbjct: 219 EWDMPKHPVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKVEAQAIFDRIRSAGVTHYCG 278
Query: 173 ALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N+L ++P+ + V+ + +GA+PPAA++ E++GF ++H+YGLTE G
Sbjct: 279 APIVQNLLVNAPAEMKAGIHHAVRAMVAGAAPPAALIEGLEAMGFDLTHTYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W L ERARL ARQGVR V + +T V HDGQ+ GEI+FR
Sbjct: 339 TVCAKQESWTELPLPERARLNARQGVRYHLQNAATVRNSDTLEEVPHDGQTLGEIMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYL + E + WF++GD+ VV DGY++IKDRSKDVIISGGENISS EVE
Sbjct: 399 IMMKGYLGNPEATEQAFH-GGWFHSGDLAVVDPDGYIKIKDRSKDVIISGGENISSIEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ A+VA D WG+ PCAFV LK + TEE II FC+A L + +
Sbjct: 458 DVLYRHPAVLVAAVVAMPDPKWGESPCAFVELKQ--GRAVTEEEIIAFCKAHLAGFKTPR 515
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
V+ E+PKT+TGKIQK+ LR
Sbjct: 516 KVVF-GEVPKTSTGKIQKYALR 536
>gi|339322411|ref|YP_004681305.1| acyl-CoA synthetase [Cupriavidus necator N-1]
gi|338169019|gb|AEI80073.1| acyl-CoA synthetase [Cupriavidus necator N-1]
Length = 544
Score = 356 bits (914), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 271/445 (60%), Gaps = 20/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + +L H E+++L D + + LA P + + +HD + +P
Sbjct: 102 RLDAANLVFMLRHGEARVLLADTEFADLARQMALEIPGLKV----IAVHDVLGPQEAPFG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG I VS++++W
Sbjct: 158 DTDYEAFLASGDPDYAWHMPADEWEAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P PV+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ GVTH C A
Sbjct: 218 DLPKHPVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFEPRLVFDLMRAEGVTHYCAAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+V L ++P+ + + PV+ + +GA PPAAVL + E++GF ++H YGLTE G
Sbjct: 278 IVHTALVNAPAAWREGVRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA + W+TL++ +RA KARQGVR + + V+ P++ V DG++ GEI+FR
Sbjct: 338 CAEQDDWSTLSEQDRAVKKARQGVRYHLQSQVAVLDPDSMQPVPADGETIGEIMFRGNIC 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+++ + WF+TGD+GV DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 398 MKGYLKNEKATREAFA-GGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDA 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ A+VAQ D WG+ PCAFV LK S + E +I CR L + K+V
Sbjct: 457 LYRHPAVLAAAVVAQPDVKWGETPCAFVELKDGASV--SAEELIAHCRTLLAGFKVPKAV 514
Query: 413 IIEDELPKTATGKIQKFVLREIVNA 437
LPKT+TGKIQKF LR V +
Sbjct: 515 YF-GPLPKTSTGKIQKFELRRKVKS 538
>gi|390448446|ref|ZP_10234066.1| AMP-dependent synthetase and ligase [Nitratireductor aquibiodomus
RA22]
gi|389666187|gb|EIM77642.1| AMP-dependent synthetase and ligase [Nitratireductor aquibiodomus
RA22]
Length = 550
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 263/445 (59%), Gaps = 21/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSL--------------FPSNTILPKPV 50
RLD ++ L H+ES+++ VD + S + AL+L F + PK
Sbjct: 105 RLDAAIIAFQLDHAESRVVIVDREFSDVMKEALALAQVKPLVIDYDDPEFGGDAPYPKGE 164
Query: 51 LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
I V + G F W P+ EWD +ALNYTSGTT +PKGVV+ HRG ++ ++
Sbjct: 165 RI-GSVDYEAFVASGDAGFTWSMPDDEWDAIALNYTSGTTGNPKGVVYHHRGAALMAYAN 223
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+ + V+LWTLPMFH NGW + W +A GT++CLR V +Y I HGVTH+
Sbjct: 224 TVHAGLSRGAVYLWTLPMFHCNGWCFPWTLALTAGTHVCLRWVRAKPMYDAIAEHGVTHL 283
Query: 171 CGALVVLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA VV++ L ++P + D V T+ A PP +VL GF V+H YGLTET G
Sbjct: 284 CGAPVVMSALLNAPEAEKRDFSHTVTFNTAAAPPPESVLSAMAEAGFTVTHLYGLTETYG 343
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
V WK +W+ L +A KARQGVR L + V+ PET DG++ GE++FR
Sbjct: 344 PAVVNEWKGEWDALDGAGQAARKARQGVRYAALEGLTVMDPETMTETPPDGETIGEVMFR 403
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M GYLK+++ + WF++GD+GV+H DGY+++KDRSKD+IISGGENISS E
Sbjct: 404 GNIVMKGYLKNRKATDEAFA-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIE 462
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE LY +PAI +VA+ D+ WG+ P AFV LK + + E II CR+ L H+
Sbjct: 463 VEDALYRHPAIAACGVVAKADEKWGETPVAFVELK--PGRDASAEEIIAHCRSLLAHFKC 520
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
K+V+ E+PKT+TGKIQKF LRE
Sbjct: 521 PKTVVFS-EIPKTSTGKIQKFRLRE 544
>gi|334140779|ref|YP_004533985.1| fatty-acyl-CoA synthase [Novosphingobium sp. PP1Y]
gi|333938809|emb|CCA92167.1| fatty-acyl-CoA synthase [Novosphingobium sp. PP1Y]
Length = 545
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 191/451 (42%), Positives = 268/451 (59%), Gaps = 26/451 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RL + ++ L H +++L VD + S AA I+ P LI D
Sbjct: 105 RLKAEEIAFQLGHGRARILMVDREFSETVAAA------TKIMADPPLIVDIDDPLYGGAC 158
Query: 55 ----DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
++ G P W+ PE E DP++LNYTSGTT PKGV+ HRG ++ ++S
Sbjct: 159 FTEGAIAYEGLLAEGSPEVPWLMPEDERDPISLNYTSGTTGDPKGVLTHHRGAYLNSLSQ 218
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+I W +P PV+LWTLPMFH NGW + W +AA GGTNICLRKVD P++ +I H V+H+
Sbjct: 219 IITWTMPLNPVYLWTLPMFHCNGWCFPWALAAQGGTNICLRKVDPPLVLDLIAAHRVSHL 278
Query: 171 CGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V +ML + + L + V+ + +GA+PP A++ E +GF ++H YGLTE G
Sbjct: 279 CGAPIVYSMLIDELTRNESTLRKSVQGMIAGAAPPKALMQGAERVGFDLTHVYGLTEVYG 338
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C + W ERARL ARQGV I M V+ P T V DG++ GEI+FR
Sbjct: 339 PAAVCLKQPDWADKTAEERARLNARQGVAMISQDAMCVLDPATMAPVPADGETAGEIMFR 398
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+ M GYL + + +++ WF+TGD+ VV SDGY I DRSKD+IISGGENISS E
Sbjct: 399 GNATMTGYLNNPQ-ATIEAFAGGWFHTGDLAVVESDGYARITDRSKDIIISGGENISSLE 457
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VL+ +P+++ A+VA+ D WG+ CAF+ L+ P E + FCR+ + +
Sbjct: 458 VEDVLHQHPSVSLAAVVAKPDARWGEVACAFIELRTGEQASPVE--LQAFCRSHIAGFKV 515
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
K VI+ E+PKT+TGK+QK VLRE+ A++
Sbjct: 516 PK-VIMFGEIPKTSTGKVQKAVLREVAKAMS 545
>gi|296135825|ref|YP_003643067.1| AMP-dependent synthetase and ligase [Thiomonas intermedia K12]
gi|295795947|gb|ADG30737.1| AMP-dependent synthetase and ligase [Thiomonas intermedia K12]
Length = 547
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 271/442 (61%), Gaps = 18/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVL-IHDDVSATSSPT 63
RLD + ++ +L H +K + VD + + + A++L + P V+ + D
Sbjct: 99 RLDAEALAYMLLHGGAKAVLVDPELAAVMQRAVALAVEQGLAPPLVIDVPDPEFVPGGQG 158
Query: 64 VGHPNFKWVQPES-----------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G N++ + E EWD ++LNYTSGTT PKGVV+ HRG ++ VS+++
Sbjct: 159 IGTLNYEALLAEGLASEALPDVADEWDSISLNYTSGTTGKPKGVVYSHRGAYVNAVSNIL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W +P PV+LWTLPMFH NGW + W +AA G N+CLRKV+ I+ I+ GVTH CG
Sbjct: 219 EWDMPKHPVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKVEAQAIFDRIRSAGVTHYCG 278
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N+L ++P+ + V+ + +GA+PPAA++ E++GF ++H+YGLTE G
Sbjct: 279 APIVHNLLVNAPAEMRAGIHHAVRAMVAGAAPPAALIEGLEAMGFDLTHTYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + W L ERARL ARQGVR V + +T V HDGQ+ GEI+FR
Sbjct: 339 TVCAKQESWTELPLPERARLNARQGVRYHLQNAATVRNSDTLEEVPHDGQTLGEIMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYL + E + WF++GD+ VV DGY++IKDRSKDVIISGGENISS EVE
Sbjct: 399 IMMKGYLGNPEATEQAFH-GGWFHSGDLAVVDPDGYIKIKDRSKDVIISGGENISSIEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ A+VA D WG+ PCAFV LK + TEE II FC+A L + +
Sbjct: 458 DVLYRHPAVLVAAVVAMPDPKWGESPCAFVELKQ--GRTATEEEIIAFCKAHLAGFKTPR 515
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
V+ E+PKT+TGKIQK+ LR
Sbjct: 516 KVVF-GEVPKTSTGKIQKYALR 536
>gi|209517804|ref|ZP_03266639.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
gi|209501750|gb|EEA01771.1| AMP-dependent synthetase and ligase [Burkholderia sp. H160]
Length = 544
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 268/442 (60%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD----VSATS 60
RLD + +L H E+K L VD + A +A FP ++ D + AT
Sbjct: 103 RLDVATLLFMLRHGEAKALIVDTEYGEFAHSAALEFPDLRVISVADAQPADAAQFIRATD 162
Query: 61 SPT---VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P F+W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 163 YEAFVQTGDPCFEWTPPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNALSNILEWDMP 222
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 223 KHAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFDAKTVFELIRRERITHYCGAPIVQ 282
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ L+++P+ + + V + +GA+PP AV+ + + +GF ++H YGLTET G CA
Sbjct: 283 SSLANAPAEWREGITHRVSTMVAGAAPPPAVIAKMKQIGFDLTHVYGLTETYGPAAVCAK 342
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ +W+ L D RA L ARQGVR A + V+ +T V DG++ GEI+FR M G
Sbjct: 343 QDEWDALDDQTRADLTARQGVRYHLQAAVAVLDADTLAPVPDDGETIGEIMFRGNICMKG 402
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK++ + + WF+TGD+GV +DGY+ I+DRSKD+IISGGENISS EVE LY
Sbjct: 403 YLKNERATEAAFK-GGWFHTGDLGVRTADGYIRIRDRSKDIIISGGENISSIEVEDTLYR 461
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA++ A+VA D WG+ PCAF+ LK + TEE II CR L Y K+V
Sbjct: 462 HPAVSVAAVVAMPDPKWGEVPCAFIELK--EGAQVTEEEIIAHCRLFLAGYKLPKAVRF- 518
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR + A
Sbjct: 519 GELPKTSTGKIQKFELRARIKA 540
>gi|149912873|ref|ZP_01901407.1| AMP-dependent synthetase and ligase [Roseobacter sp. AzwK-3b]
gi|149813279|gb|EDM73105.1| AMP-dependent synthetase and ligase [Roseobacter sp. AzwK-3b]
Length = 544
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 187/444 (42%), Positives = 278/444 (62%), Gaps = 24/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--------- 55
RLD ++ L H+ +KL+ VD + +PL AL+L ++ P V+++DD
Sbjct: 103 RLDAAIIAFQLDHAMAKLVIVDREFAPLMQDALAL---ASVTPD-VILYDDPEYDGPGDM 158
Query: 56 ---VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ + G P+F W+ PE EWD +++NYTSGTT PKGVV HRG +++ + +
Sbjct: 159 PEAMDYEAFLATGDPDFAWLMPEDEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNAL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ V+LWTLPMFH NGWS+ W ++A+ GT++CLR+V I+ + +GVTH+CG
Sbjct: 219 TTSMAKHSVYLWTLPMFHCNGWSFPWTLSAIIGTHVCLRQVRAEPIWRALAENGVTHLCG 278
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V+++++S+ + +PLDR V+ T+ A PP +++ ++ GF V+H YGLTET G
Sbjct: 279 APIVMSLINSADDSVKRPLDRRVQFFTAAAPPPESLMAEMDAAGFDVTHLYGLTETYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V W + W++L ++A LKARQGVR + L +DV+ P+T V DG + GE++FR
Sbjct: 339 VVNEWHADWSSLPGPQKAALKARQGVRYLPLEGLDVLDPDTMRPVPRDGVTMGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GY + E + + WF++GD+GVVH DGY+++KDRSKD+IISGGENISS EVE
Sbjct: 399 VVMKGYFRSPEATQKALA-GGWFHSGDLGVVHPDGYIQLKDRSKDIIISGGENISSIEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE-FCRARLPHYMAH 409
LY +PA+ A+VA WG+ PCAFV L S +EA + +CR L Y
Sbjct: 458 EALYRHPAVAVAAVVAMPHDKWGETPCAFVQLT---SGHDADEASLRAWCRDHLAPYKVP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
++ E+P+T+TGKIQKFVLR+
Sbjct: 515 GRIVFA-EIPRTSTGKIQKFVLRD 537
>gi|338999324|ref|ZP_08637974.1| AMP-dependent synthetase and ligase [Halomonas sp. TD01]
gi|338763888|gb|EGP18870.1| AMP-dependent synthetase and ligase [Halomonas sp. TD01]
Length = 544
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 191/443 (43%), Positives = 269/443 (60%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD + V+ +L HS S+LL VD + + AL P P +I+ D S
Sbjct: 104 RLDPEAVAFILQHSRSRLLLVDPEYVDVVEKALDQLEG----PAPQVINVSDPSQGEERW 159
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G + W P+ EWD +AL YTSGTT +PKGVV HRG ++ VS+ +
Sbjct: 160 IGGLEYEVLLTNQPARYDWQLPDDEWDAIALGYTSGTTGNPKGVVSHHRGAYLNAVSNAL 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P ++LWTLPMFH NGW + W +AA+GGTN+CLRKVD I ++IK GVTH CG
Sbjct: 220 SWTLPANVIYLWTLPMFHCNGWCFPWTLAAIGGTNVCLRKVDPEHILTLIKEQGVTHYCG 279
Query: 173 ALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V +M++ + + + ++ V L +GA+PPA+VL R E +G ++H YGLTET G
Sbjct: 280 APIVHSMIADAATARSELIEHKVYGLIAGAAPPASVLERMEKIGIELTHVYGLTETYGPA 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C +++W + ER RL RQGV +M V+ ET V DG++ GEI+FR
Sbjct: 340 SVCTKQTEWAQCSLEERVRLNGRQGVAYPLQEEMAVLDSETMAPVPADGKTIGEIMFRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYL+++ + WF++GD+ V+ DGY++I+DR KDVIISGGENISS EVE
Sbjct: 400 IVMKGYLRNEAATREAFA-GGWFHSGDLAVIEPDGYVKIRDRLKDVIISGGENISSLEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
++ +P + VA+VA D WG+ P AFV L+ + +E+A+I FCR ++ HY A K
Sbjct: 459 DIVQRHPDVEFVAVVAMTDDKWGEVPAAFVQLR--SGSELSEDALIRFCREQISHYKAPK 516
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+I +LP TATGKIQKF LR+
Sbjct: 517 KIIF-GQLPTTATGKIQKFQLRQ 538
>gi|357114182|ref|XP_003558879.1| PREDICTED: medium-chain-fatty-acid--CoA ligase-like [Brachypodium
distachyon]
Length = 562
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 206/458 (44%), Positives = 276/458 (60%), Gaps = 26/458 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ-SSPLALAALSLFPSNTILPKPVLI----------- 52
R D VSVLL HS +K+ V+ Q + A L SN KP L+
Sbjct: 97 RHDAAMVSVLLQHSGAKVFLVESQFLALARHALALLAESNNNKNKPPLLVTIGIGNADGG 156
Query: 53 --HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ A G +W P E DP++LNYTSGTTS PKGVV+ HRG ++ ++++
Sbjct: 157 EAEPEYEALLRSAPGGFGIRW--PADELDPISLNYTSGTTSRPKGVVYSHRGAYLNSLAT 214
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICL----RKVDVPIIYSVIKHHG 166
+ + PV+LWT+PMFH NGW W AA GGT++C+ + I+ I H
Sbjct: 215 ALANEMRAMPVYLWTVPMFHCNGWCMVWATAAQGGTSVCMPGSASGMSPKGIFDHIARHK 274
Query: 167 VTHICGALVVLNMLSSSPS---TKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSY 221
VT++ GA VL M+ ++P+ T PL + V+I T GA PP VL + + LGF V H Y
Sbjct: 275 VTNMGGAPTVLGMIVNAPASEQTPPLLASKRVRISTGGAPPPPHVLAKMDELGFDVVHGY 334
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQS 281
GLTET G C WK +W+ L ERAR++ARQGV + L +++ P T +V DG++
Sbjct: 335 GLTETYGPATLCVWKPEWDALPAAERARIRARQGVPHVMLDGLEIKDPVTMETVPSDGRA 394
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GE++ R ++M GY KD ++ MR W TGD+GV H DGY+++KDRSKD+IISGG
Sbjct: 395 VGEVMLRGNTVMSGYYKDAAATAEAMRGG-WLRTGDLGVRHPDGYVQLKDRSKDIIISGG 453
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRA 401
ENISS EVES L+ +PA+ + A+VA+ D WG+ PCAFV+LK S T IIEFCRA
Sbjct: 454 ENISSIEVESALFGHPAVLDAAVVARPDDHWGETPCAFVTLKEGASATTTAHDIIEFCRA 513
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
RLP YMA K+V+ DELPKT+TGK QK+VLRE A+
Sbjct: 514 RLPRYMAPKTVVFADELPKTSTGKTQKYVLREKARAMG 551
>gi|154252530|ref|YP_001413354.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans
DS-1]
gi|154156480|gb|ABS63697.1| AMP-dependent synthetase and ligase [Parvibaculum lavamentivorans
DS-1]
Length = 542
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 195/444 (43%), Positives = 267/444 (60%), Gaps = 24/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + +L H E+K LFVD + S L ALS KP +I D + P
Sbjct: 103 RLDGAIIGFMLDHGEAKALFVDREFSALGKEALS-----KAKVKPFVIDIDDAEYDGPGD 157
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G F W P EW ++LNYTSGTT +PKGVV HRG +++ + ++
Sbjct: 158 RIGEAEYEDFLAQGDAKFDWSLPADEWQAISLNYTSGTTGNPKGVVFHHRGAYLLAMGNI 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ + V+LWT+PMFH NGW ++W M+ + GT++CLR+V I+S I HGVTH+
Sbjct: 218 VTAGMTGNSVYLWTVPMFHCNGWCFTWSMSVIAGTHVCLRRVTAANIFSAIAEHGVTHMA 277
Query: 172 GALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA V++ L ++ KPL V + A PPAA + + E+ GF V H YGLTET G
Sbjct: 278 GAPTVMSFLINATEEEKKPLPHTVSYFAAAAPPPAATIRKLEAEGFNVIHVYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V AW +W+ L RA++KARQGV L + V PET V DG++ GE++FR
Sbjct: 338 AVVNAWHDEWDELEVNARAQVKARQGVNYPVLEGISVRDPETMEEVPRDGETMGEVMFRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + S+ WF++GD+GV H D Y+++KDRSKD+IISGGENISS EV
Sbjct: 398 NVVMKGYLKNPKASAEAFA-GGWFHSGDLGVWHPDNYIQLKDRSKDIIISGGENISSLEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +P I E A+VA+ D+ WG+ PCAF++L+ S TE+ +I +CR L H+
Sbjct: 457 EDVLYKHPDIIEAAVVARPDEKWGETPCAFITLRKGASL--TEKDVIAYCREHLAHFKCP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K+V+ D LPKT+TGK+QKF LRE
Sbjct: 515 KTVVFTD-LPKTSTGKVQKFKLRE 537
>gi|13475803|ref|NP_107373.1| acyl-CoA synthetase [Mesorhizobium loti MAFF303099]
gi|14026562|dbj|BAB53159.1| probable AMP-binding protein [Mesorhizobium loti MAFF303099]
Length = 541
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 189/439 (43%), Positives = 261/439 (59%), Gaps = 19/439 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL+ + V+ +L HS+S L+ D +PL A L NT+ PV+ D A +S
Sbjct: 101 RLEPETVAYILAHSDSTLVIADTAFAPLLREAFRLN-GNTL---PVVDVVDAQAQASAEF 156
Query: 65 G---------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
G HP W P+ EW +ALNYTSGT+ PKGV++ HRG +++ + ++ W
Sbjct: 157 GERSYEDLAAHPPMGWELPKDEWQALALNYTSGTSGRPKGVIYHHRGAYLMAMGTIAAWA 216
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+P P +L +PMFH NGW++ W MA VG + R + + H VTH+ A +
Sbjct: 217 LPQHPTYLSVVPMFHCNGWTHPWSMAIVGANMVFTRDASPGKLLEAMAAHRVTHMGAAPI 276
Query: 176 VLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
VL ML S +P + ++++T+GA PP AVL + +G V YGLTET G + C
Sbjct: 277 VLQMLCDGRGASAQPFNPQIRVMTAGAPPPPAVLEKAAQMGLDVMQVYGLTETYGHISQC 336
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
W+ +W L+ + RA +A QGV + D+ VV +TG V DG +QGEI R ++M
Sbjct: 337 LWQDEWEALSVSARAEKQAMQGVAFPMVEDIRVVDRDTGTDVPRDGLTQGEIAIRGNTVM 396
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY KD ++ ++ WF++GD VVH DGY++I+DR KDVIISGGENISS EVESVL
Sbjct: 397 KGYYKDATSTAAAF-ESGWFWSGDAAVVHPDGYIQIRDRLKDVIISGGENISSVEVESVL 455
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +PAI+ A+VA+ WG+ PCAFV L+ S TE II FCRA + H+ A K+V+
Sbjct: 456 YRHPAISVAAVVARPHPKWGESPCAFVELREGASA--TEAEIIAFCRANIAHFKAPKTVV 513
Query: 414 IEDELPKTATGKIQKFVLR 432
LPKTATGKIQKF+LR
Sbjct: 514 F-GPLPKTATGKIQKFILR 531
>gi|357025492|ref|ZP_09087615.1| AMP-dependent synthetase and ligase [Mesorhizobium amorphae
CCNWGS0123]
gi|355542620|gb|EHH11773.1| AMP-dependent synthetase and ligase [Mesorhizobium amorphae
CCNWGS0123]
Length = 546
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 192/454 (42%), Positives = 271/454 (59%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-HDDVS-ATSSP 62
RLD ++ + H+E+K+L VD + S + AL+ + +P++I +DD+ AT +P
Sbjct: 102 RLDAAVIAFQIDHAETKVLIVDREFSGVMKEALAQAKA-----RPLIIDYDDLEYATDAP 156
Query: 63 ----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
G +F W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++
Sbjct: 157 YPKGERIGSLDYEAFVAGGDEDFTWAMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALM 216
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++ I + V+LWTLPMFH NGW + W +A GT++CLR V IY I HG
Sbjct: 217 AYTNTIHAGMAKHAVYLWTLPMFHCNGWCFPWTLAVQAGTHVCLRWVRPKPIYDAIADHG 276
Query: 167 VTHICGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH+CGA +V+++L ++ P V T+ A PP AVL GF V+H YGLT
Sbjct: 277 VTHLCGAPIVMSVLINAKDEDKRQFPQMVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLT 336
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G V W ++W+ L R KARQGVR L + V++PET DG++ GE
Sbjct: 337 ETYGPAVVNEWHNEWDGLEKGPRTAKKARQGVRYAALEGLTVMNPETMTETPADGETIGE 396
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++FR +M GYLK+++ + WF++GD+GV+H+DGY+++KDRSKD+IISGGENI
Sbjct: 397 VMFRGNIVMKGYLKNRKATDEAFA-GGWFHSGDLGVMHADGYIQLKDRSKDIIISGGENI 455
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE LY +PA+ +VA+ D WG+ P A+V LK +K TE II+ CRA L
Sbjct: 456 SSIEVEDALYKHPAVASCGVVARADDKWGEVPVAYVELK--PAKTATEAEIIDHCRALLA 513
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+ K+V+ E+PKT+TGKIQKF LRE+
Sbjct: 514 RFKVPKAVVFA-EIPKTSTGKIQKFRLREMAKGT 546
>gi|163854347|ref|YP_001628645.1| AMP-dependent synthetase/ligase [Bordetella petrii DSM 12804]
gi|163258075|emb|CAP40374.1| AMP-dependent synthetase and ligase family protein [Bordetella
petrii]
Length = 552
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 197/442 (44%), Positives = 266/442 (60%), Gaps = 23/442 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H + +L D + + L L + P+ V I D T+
Sbjct: 102 RLDAATLAFILEHGRATVLLFDSEYASLVQDVLGRLAAP---PRTVRIEDAEYTGEHGTL 158
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P+ W P EW + LNYTSGTT +PKGVV+ HRG ++ +++
Sbjct: 159 GDAEYETWLAAQPPDAAWDWPADEWQSICLNYTSGTTGNPKGVVYHHRGAYLNATGNVLA 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+P V+LWTLPMFH NGW + W +AA+ GTN+CLR+V+ I+ I+ + V + C A
Sbjct: 219 CGMPPHAVYLWTLPMFHCNGWCFPWTLAALAGTNVCLRRVEPAAIFDAIRRYRVGYFCAA 278
Query: 174 LVVLNMLSSSPST---KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
VVLNML ++PS + R V+ LT GA+PPAAV+ E LG V+H YGLTET G
Sbjct: 279 PVVLNMLINAPSQVQHRATHR-VQALTGGAAPPAAVIEAMEQLGVGVTHLYGLTETYGPS 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
VSCAW +W+ L ERA LKAR GVR + + + VV + V DG + GEIV R
Sbjct: 338 VSCAWHDEWDELPLAERAALKARIGVRKLNVEHVQVVD-DRLQPVPADGATLGEIVLRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYL + G++ WF++GD+GVVH DGY+EIKDR+KD+IISGGENIS+ EVE
Sbjct: 397 TLMKGYLHN-PGATAEAFAGGWFHSGDLGVVHPDGYIEIKDRAKDIIISGGENISTVEVE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SVLY +P I E A+VA+ D WG+ PCAFV+LK T + ++ CR L + +
Sbjct: 456 SVLYRHPDILEAAVVARPDPTWGETPCAFVTLK--DGAHCTADDVLRHCREHLARFKVPR 513
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
+V+ LPKTATGKIQKFVLR
Sbjct: 514 TVVF-GPLPKTATGKIQKFVLR 534
>gi|116695093|ref|YP_840669.1| acyl-CoA synthetase [Ralstonia eutropha H16]
gi|113529592|emb|CAJ95939.1| Acyl-CoA synthetase [Ralstonia eutropha H16]
Length = 544
Score = 354 bits (909), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 191/445 (42%), Positives = 270/445 (60%), Gaps = 20/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + +L H E+++L D + + LA P + + +HD + +P
Sbjct: 102 RLDAANLVFMLRHGEARVLLADTEFADLARQMALEIPGLKV----IAVHDVLGPQEAPFG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G ++ W P EW+ +ALNYTSGTT PKGVV+ HRG I VS++++W
Sbjct: 158 DTDYEAFLASGDSDYAWHMPADEWEAIALNYTSGTTGDPKGVVYHHRGAAINAVSNILEW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P PV+LWTLPMFH NGW + W +AA G N+CLRK + +++ +++ GVTH C A
Sbjct: 218 DLPKHPVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFEPRLVFDLMREEGVTHYCAAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+V L ++P+ + + PV+ + +GA PPAAVL + E++GF ++H YGLTE G
Sbjct: 278 IVHTALVNAPAAWREGVRGPVRGMVAGAPPPAAVLAQMEAMGFELTHVYGLTEVYGPAAV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA + W+TL++ +RA KARQGVR + + V+ P++ V DG++ GEI+FR
Sbjct: 338 CAEQDDWSTLSEQDRAVRKARQGVRYHLQSQVAVLDPDSMQPVPADGETIGEIMFRGNIC 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+++ + WF+TGD+GV DGY++IKDRSKD+IISGGENISS EVE
Sbjct: 398 MKGYLKNEKATREAFA-GGWFHTGDLGVCMPDGYIKIKDRSKDIIISGGENISSVEVEDA 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ A+VAQ D WG+ PCAFV LK S + E +I CR L + K+V
Sbjct: 457 LYRHPAVLAAAVVAQPDARWGETPCAFVELKDGASV--SAEELIAHCRTLLAGFKVPKAV 514
Query: 413 IIEDELPKTATGKIQKFVLREIVNA 437
LPKT+TGKIQKF LR V +
Sbjct: 515 YF-GPLPKTSTGKIQKFELRRKVKS 538
>gi|171463917|ref|YP_001798030.1| AMP-dependent synthetase and ligase [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171193455|gb|ACB44416.1| AMP-dependent synthetase and ligase [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 550
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 275/445 (61%), Gaps = 22/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD------DVSA 58
RLD + ++ +L+H E+K++ VD + S + AL + ++ + L+ D DV
Sbjct: 102 RLDAESIAFMLNHGEAKVVIVDPEFSVVMKKALEIAKKDS--GREFLVIDVGEKEFDVPG 159
Query: 59 TSSPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ G P+F W P EW + LNYTSGTT +PKGVV+ HRG I VS+
Sbjct: 160 EKLGKLTYEQFLSEGDPSFAWQVPADEWQAICLNYTSGTTGNPKGVVYHHRGAAINAVSN 219
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++DW I PV+LWTLPMFH NGW + W +AA G N+CLR+VD I++ IK HGVTH
Sbjct: 220 VLDWDINKHPVYLWTLPMFHCNGWCFPWTIAARAGVNVCLRRVDAQHIFAAIKEHGVTHY 279
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
C A +V N+L ++P P VK L +GA+PPA+++ E LGF ++H YGLTE G
Sbjct: 280 CAAPIVHNLLVNAPDELKAGVPTGVKGLIAGAAPPASIIEGMEKLGFDLTHVYGLTEVYG 339
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C + +WN L +RARL ARQGVR + V+ PET V DG++ GEI+F+
Sbjct: 340 PASVCVKQDEWNDLDIGKRARLNARQGVRYHMQQAIAVLDPETMKPVPADGETMGEIMFK 399
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+++ + + WF++GD+ V++ DGY+++KDRSKD+IISGGENISS E
Sbjct: 400 GNIAMKGYLKNEKATQEAF-EGGWFHSGDLAVMNPDGYVKMKDRSKDIIISGGENISSVE 458
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +PA+N A+VA+ D WG+ PCAF+ +K T E II C+ L +
Sbjct: 459 VEDVLYRHPAVNAAAVVAKPDPKWGETPCAFLEIK--PGSDVTPEEIIAHCKQHLAGFKV 516
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++++ ELPKT+TGKIQKF LR+
Sbjct: 517 PRAIVF-CELPKTSTGKIQKFELRK 540
>gi|384081700|ref|ZP_09992875.1| acyl-CoA synthase [gamma proteobacterium HIMB30]
Length = 547
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 195/440 (44%), Positives = 269/440 (61%), Gaps = 16/440 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALS---------LFPSNTILPKPVLIHDD 55
RLD + ++ +L+H+E + L D + + + ALS L S+ L P + D
Sbjct: 105 RLDPETIAGILNHAEPETLVFDAELGDVLVDALSRCTHQPAHLLVISSPGLDLPDQLTDV 164
Query: 56 VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
+ G P W P SEWD LNYTSGT PKGVV HRG +++ + ++ W
Sbjct: 165 IDYEDFVETGDPASAWSLPASEWDAFGLNYTSGTGGRPKGVVISHRGAYLMAMGTVPAWN 224
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+P P++L+T+P+FH NGW ++W A V GT ICL+K++ I+ VI + VTH GA V
Sbjct: 225 VPMHPIYLYTVPLFHCNGWGHAWMNALVAGTIICLKKIEAATIFDVISKYRVTHFGGAPV 284
Query: 176 VLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
VL++L ++PS K D PV ++T+GA PP A+L +TE LG V YGLTET G ++ C
Sbjct: 285 VLSLLVNAPSEHKKQFDHPVHVMTAGAPPPPAILEQTEQLGLEVMQVYGLTETYGHIMHC 344
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
AW W+ L +ERA +KARQGV+ +++VV E G V DG+S+GEIV RS ++M
Sbjct: 345 AWNPSWDALGFSERAEIKARQGVQFTHTEEVEVVDLERGDPVPWDGRSEGEIVIRSNTVM 404
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY KD + + +F +GD+ V H DGY+EIKDR KDVIISGGENISS EVE++L
Sbjct: 405 KGYHKDPIATEEAFK-GGFFRSGDVAVRHPDGYIEIKDRLKDVIISGGENISSVEVENIL 463
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHKSV 412
Y P + A+VA+ D WG+ P FV L + KP EA +I+FCR L + K +
Sbjct: 464 YRIPGVACAAVVAKADDKWGEVPVGFVELSHD--AKPINEAEVIQFCRQHLAGFKTPKQI 521
Query: 413 IIEDELPKTATGKIQKFVLR 432
I E+PKT+TGK+QKFVLR
Sbjct: 522 IF-GEIPKTSTGKVQKFVLR 540
>gi|71905868|ref|YP_283455.1| acyl-CoA synthetase [Dechloromonas aromatica RCB]
gi|71845489|gb|AAZ44985.1| AMP-dependent synthetase and ligase [Dechloromonas aromatica RCB]
Length = 545
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 204/448 (45%), Positives = 282/448 (62%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD-DVSATSSPT 63
RLD + ++ +L H E+K+L D + S + AL L PKP++I D T +
Sbjct: 102 RLDAEAIAFMLAHGEAKVLITDPEFSKVVKPALELLEG----PKPLVIDSLDPDYTEGES 157
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P+F W PE EWD +ALNYTSGTT +PKGVV+ HRG ++ + S++I
Sbjct: 158 LGEKDYESFLNEGEPDFAWQLPEDEWDAIALNYTSGTTGNPKGVVYHHRGAYLNSASNII 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P V+LWTLPMFH NGW + W +AA GT++CLR+VD +I+ +IK H V+H+CG
Sbjct: 218 SWGMPPHSVYLWTLPMFHCNGWCFPWTLAANAGTSVCLRRVDPVLIFGLIKEHKVSHMCG 277
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V M+ ++P T + + V L +GA+PPAA++ + +GF ++H YGLTET G
Sbjct: 278 APIVYGMMINAPETLREGIAHTVNGLIAGAAPPAAIIEGAQRMGFNITHVYGLTETYGPA 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + +W+ L +A RQGVR + V+ P + V DG++ GEI+FR
Sbjct: 338 SVCAKQPEWDRLPIDLQAARNGRQGVRYHMQEAIAVLDPVSMEPVPWDGETMGEIMFRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ S WF+TGD+ VVHSDGY++IKDRSKDVIISGGENISS EVE
Sbjct: 398 LVMKGYLKNEKASEEAFA-GGWFHTGDLAVVHSDGYVKIKDRSKDVIISGGENISSLEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ A+VA+ D+ WG+ P AF+ LK K TE IIE CRA L + K
Sbjct: 457 DVLYRHPAVIAAAVVAKPDEKWGEVPAAFIELK--TDAKCTEAEIIEHCRAHLARFKVPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
V+ ELPKT+TGKIQK+VLR+ N+
Sbjct: 515 QVVF-GELPKTSTGKIQKYVLRQHANSA 541
>gi|311108374|ref|YP_003981227.1| AMP-binding protein [Achromobacter xylosoxidans A8]
gi|310763063|gb|ADP18512.1| AMP-binding enzyme family protein 24 [Achromobacter xylosoxidans
A8]
Length = 545
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 188/441 (42%), Positives = 266/441 (60%), Gaps = 18/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAAL--SLFPSNTI--------LPKPVLIHD 54
RLD + ++ +L H + +L D + +P+ AL S P + P ++
Sbjct: 106 RLDAETLAFILEHGAATVLLTDREYAPVMAQALAKSRRPIRVVDIDDPEYGGPGELIGEM 165
Query: 55 DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
A + F W P EW + LNYTSGTT SPKGV++ HRG ++ + + +
Sbjct: 166 SYEALLASGDAQAGFPW--PADEWQSLCLNYTSGTTGSPKGVLYHHRGAYLNAMGNALAC 223
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ V+LWTLPMFH NGWS+ W +A + GTN+CLR+V+ ++ I+ HGV + C A
Sbjct: 224 DMRQHAVYLWTLPMFHCNGWSFPWTIALLAGTNVCLRRVEAGAVFDAIQAHGVDYFCAAP 283
Query: 175 VVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
VVL ML +SP + RPV++LT G+ PPAAV+ + LG V+H YGLTE+ G +S
Sbjct: 284 VVLGMLINSPPEIKRRASRPVQVLTGGSPPPAAVIAAMDELGIDVTHLYGLTESYGPSIS 343
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW W+ L E+A LKAR GVR + + V+ P T V DG + GEI+ R ++
Sbjct: 344 CAWHEAWSDLPLEEQAALKARIGVRKHTMEQVRVLDPATLDPVPPDGVTVGEIMMRGNTL 403
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + ++ WF+TGD+ VVH DGY++IKDR+KD++ISGGENIS+ EVE V
Sbjct: 404 MKGYLKNPQATAEAFA-GGWFHTGDLAVVHPDGYMQIKDRAKDIVISGGENISTVEVEDV 462
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ E A+VA+ D WG+ PCAFV+LK + E + FCR RL + ++
Sbjct: 463 LYAHPAVLEAAVVARPDAKWGETPCAFVTLKDGCAASADE--LTGFCRTRLAGFKVPRTF 520
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+ LPKTATGKIQK++LRE
Sbjct: 521 VF-GPLPKTATGKIQKYLLRE 540
>gi|359407767|ref|ZP_09200241.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [SAR116
cluster alpha proteobacterium HIMB100]
gi|356677130|gb|EHI49477.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [SAR116
cluster alpha proteobacterium HIMB100]
Length = 546
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 186/443 (41%), Positives = 266/443 (60%), Gaps = 21/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H++++LL D AAL+ S+ + I D + S+ V
Sbjct: 106 RLDTDTIAYILDHADTRLLITDAAFGGAMKAALAA--SDNKQMTIIDIVDGQAEESANGV 163
Query: 65 -------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
P++ W P EW M LNYTSGT+ PKGVV+ HRG +++ + ++
Sbjct: 164 RLGTCDYETFLQEADPDYDWQMPTDEWQAMCLNYTSGTSGRPKGVVYHHRGAYLMAMGTI 223
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
W +P P +L+ +P+FH NGW ++W MA + GT +C RK+ IY ++ H VTH
Sbjct: 224 PVWNMPMHPTYLYVVPLFHCNGWGHAWMMAILAGTTVCCRKISAEEIYPLLATHKVTHFG 283
Query: 172 GALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VL+ML ++P + + V I+T+GA PPAA+L R E LGF V+ YGLTET G
Sbjct: 284 GAPIVLSMLVNAPEDVIQTPEHTVNIMTAGAPPPAAILERIERLGFNVTQVYGLTETYGH 343
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW W L +E+A +KA+QGVR ++V+ +TG V DGQS GE++FRS
Sbjct: 344 VTHCAWNDDWEDLDFSEKAAIKAQQGVRFTHTEALEVLDQQTGAPVPADGQSLGEVMFRS 403
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY K+ + + + D +F +GD+ V H +GY+EIKDR KD+IISGGENISS EV
Sbjct: 404 NCVMKGYHKNPDATEEALADG-YFKSGDLAVRHPNGYIEIKDRLKDIIISGGENISSVEV 462
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
ESVLY + A+VA+ D+ WG+ PCAF+ +K + TE +I FCR L +
Sbjct: 463 ESVLYRFSGVAYAAVVAKPDEKWGETPCAFLEMK--PGESATEADVITFCREHLAGFKCP 520
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
K V+ E+PKT+TGK+QKF+LR
Sbjct: 521 KQVVFT-EIPKTSTGKLQKFMLR 542
>gi|456063797|ref|YP_007502767.1| AMP-dependent synthetase and ligase [beta proteobacterium CB]
gi|455441094|gb|AGG34032.1| AMP-dependent synthetase and ligase [beta proteobacterium CB]
Length = 550
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 273/445 (61%), Gaps = 22/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD------DVSA 58
RLD + V+ +L+H E++++ VD + S + AL L + + L+ D DV
Sbjct: 102 RLDPESVAFMLNHGEARVVIVDPEFSGVMKKALELAKKES--GREFLVIDVEEKEFDVPG 159
Query: 59 TSSPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ G P F W P EW + LNYTSGTT +PKGVV+ HRG I VS+
Sbjct: 160 EKLGKLTYEKFLSEGDPQFAWQVPADEWQAICLNYTSGTTGNPKGVVYHHRGAAINAVSN 219
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++DW I P++LWTLPMFH NGW + W +AA G N+CLR+VD I++ IK HGVTH
Sbjct: 220 ILDWDINKHPIYLWTLPMFHCNGWCFPWTVAARAGINVCLRRVDAQHIFAAIKDHGVTHY 279
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
C A +V N+L ++P P VK L +GA+PPA+++ E LGF ++H YGLTE G
Sbjct: 280 CAAPIVHNLLVNAPDELKEGVPTGVKGLIAGAAPPASIIEGMEKLGFDLTHVYGLTEVYG 339
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C + +WN + ERARL ARQGVR + V+ PET V DG++ GEI+F+
Sbjct: 340 PAAVCVKQDEWNEVDIGERARLNARQGVRYHMQQAIAVLDPETLEPVPADGETMGEIMFK 399
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+++ + + WF++GD+ V++ DGY+++KDRSKD+IISGGENISS E
Sbjct: 400 GNIAMKGYLKNEKATKEAF-EGGWFHSGDLAVMNPDGYVKMKDRSKDIIISGGENISSVE 458
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +PA+ A+VA+ D WG+ PCAF+ +K + P + II C+ L +
Sbjct: 459 VEDVLYRHPAVIAAAVVAKPDPKWGETPCAFLEIKPGMEVTPAD--IITHCKQHLAGFKV 516
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++++ ELPKT+TGKIQKF LR+
Sbjct: 517 PRAIVF-CELPKTSTGKIQKFELRK 540
>gi|13476075|ref|NP_107645.1| acyl-CoA synthetase [Mesorhizobium loti MAFF303099]
gi|14026835|dbj|BAB53431.1| probable AMP-binding protein [Mesorhizobium loti MAFF303099]
Length = 546
Score = 353 bits (907), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 193/452 (42%), Positives = 264/452 (58%), Gaps = 29/452 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKP--------------- 49
RLD ++ L H+E+K+L VD + S + AL L ++
Sbjct: 102 RLDAAVIAFQLDHAETKVLIVDREFSGVVRQALDLAKVTPLVIDYDDPDYAADAPYPKGE 161
Query: 50 ---VLIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
L ++D A G +F W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++
Sbjct: 162 RIGALDYEDFVAG-----GDEDFAWSMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALM 216
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++ I + V+LWTLPMFH NGW + W +A GT++CLR V IY I HG
Sbjct: 217 AYTNTIHAGMAKHAVYLWTLPMFHCNGWCFPWTLAVQAGTHVCLRWVRPKPIYDAIADHG 276
Query: 167 VTHICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH+CGA VV+++L + + + V T+ A PP AVL GF V+H YGLT
Sbjct: 277 VTHLCGAPVVMSVLINARDEDKRTFAQTVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLT 336
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G V W +W+ LA ER+ KARQGVR L + V+ PET + DG++ GE
Sbjct: 337 ETYGPAVVNEWHGEWDDLAKGERSAKKARQGVRYAALEGLTVMDPETMQATPADGETIGE 396
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++FR +M GYLK+++ S WF++GD+GV+H DGY+++KDRSKD+IISGGENI
Sbjct: 397 VMFRGNIVMKGYLKNRKASDEAFA-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENI 455
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE LY +P++ +VA+ D WG+ P A+V LK K +E IIE CRA L
Sbjct: 456 SSIEVEDALYKHPSVASCGVVARHDDKWGEVPVAYVELK--PGKTASEAEIIEHCRALLA 513
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVN 436
+ K+VI E+PKT+TGKIQKF LRE+
Sbjct: 514 RFKVPKAVIFA-EIPKTSTGKIQKFRLREMAK 544
>gi|6227012|gb|AAF06048.1|AC009513_4 Similar to gb|X94625 amp-binding protein from Brassica napus and is
a member of the PF|00501 AMP-binding enzymes
[Arabidopsis thaliana]
Length = 551
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 194/462 (41%), Positives = 271/462 (58%), Gaps = 43/462 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----DDVSATS 60
RLD K ++++L H++ K LFVDY +PL L L P + P++I D + S
Sbjct: 81 RLDAKTIAIILRHAQPKCLFVDYTFAPLIQEVLRLLPFDASKLHPLIISIIEIDSTTKRS 140
Query: 61 SPTVGHPNF------------KWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
S + + + +E DP++LNYTSGTTS PKGV+
Sbjct: 141 SMELDYEGLIRKGDLTLSSSASLFRVHNEHDPISLNYTSGTTSEPKGVI----------- 189
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
+ W + PV+LWTLPMFH NGW+++W +AA GGTN+C+R V IY I HGVT
Sbjct: 190 ---LGWEMGMCPVYLWTLPMFHGNGWAHTWSVAARGGTNVCIRNVTAVEIYKNIGLHGVT 246
Query: 169 HICGALVVLNMLSSSPSTKPLDR--PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+ V +L T + PV++LT G+SPPAA+L + E LGF V H YGLTE
Sbjct: 247 HMSCVPTVFRILLEGSRTNQSHKSLPVRVLTGGSSPPAALLEKVERLGFQVMHVYGLTEA 306
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
+G + C W+ +WN L ++ +LKARQGVR I L ++DV + +T SV DG + GEIV
Sbjct: 307 SGAALYCEWQDEWNRLPKHQQMKLKARQGVRNITLDEVDVKNTKTRESVPRDGITMGEIV 366
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+ +M GYLK+ + +S + + W TGDIGV+H DG++EIKDRSKD+IISGGENISS
Sbjct: 367 LKGNIVMKGYLKNPKATSEVFK-HGWLNTGDIGVIHPDGHIEIKDRSKDIIISGGENISS 425
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL-KWELSKKPTEEA-------IIEF 398
EVE VLY + + E A+VA WG+ PCAFV L + E +++ E+ +I++
Sbjct: 426 IEVERVLYEHQKVLEAAVVAMPHPLWGETPCAFVVLNQGETNQRDREKESVTKEGDLIKY 485
Query: 399 CRARLPHYMAHKSVIIEDELPKTATGKIQK--FVLREIVNAV 438
CR +PH+M + V+ +ELPK GKI K LR+I +
Sbjct: 486 CRENMPHFMCPRKVVFLEELPKNGNGKILKPNLSLRDIAKGL 527
>gi|237654190|ref|YP_002890504.1| acyl-CoA synthetase [Thauera sp. MZ1T]
gi|237625437|gb|ACR02127.1| AMP-dependent synthetase and ligase [Thauera sp. MZ1T]
Length = 546
Score = 353 bits (906), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 198/445 (44%), Positives = 270/445 (60%), Gaps = 14/445 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E+K+L D + + + AAL L P + L L + TV
Sbjct: 103 RLDADAIAFMLQHGEAKVLITDPEFAGVVRAALELLPGDKPLVVDALDPEYPGTERIGTV 162
Query: 65 --------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
G+P+F+W PE EWD +ALNYTSGTT +PKGVV+ HRG ++ S++I W +
Sbjct: 163 LYEDFLAGGNPDFQWKLPEDEWDAIALNYTSGTTGNPKGVVYHHRGAYLNAASNIISWGM 222
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P +LWTLPMFH NGW + W MAA G N+CLRKVD +IY +I+ H VTH+CGA +V
Sbjct: 223 PQHSSYLWTLPMFHCNGWCFPWTMAANAGVNVCLRKVDPALIYELIRRHKVTHMCGAPIV 282
Query: 177 LNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
ML ++P ++ V L +GA+PPAA++ E +GF ++H YGLTET G CA
Sbjct: 283 YGMLINAPEGLRAGIEHSVAGLIAGAAPPAAIIEGAEKIGFDITHVYGLTETYGPASVCA 342
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+W+ L RA RQGVR + V+ P T V DG++ GEI+FR +M
Sbjct: 343 KHPEWDALPIDRRAERNGRQGVRYHMQEAITVLDPVTMEPVPADGETMGEIMFRGNLVMK 402
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+++ + WF+TGD+ V+H DGY++IKDRSKDVIISGGENISS EVE VLY
Sbjct: 403 GYLKNEKATQESFA-GGWFHTGDLAVMHPDGYVKIKDRSKDVIISGGENISSLEVEEVLY 461
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ A+VA+ D+ WG+ P A++ +K T + II CR L Y K +
Sbjct: 462 RHPAVLTAAVVAKPDEKWGEVPAAYIEVK--EGAGVTADDIIAHCREHLARYKVPKFIEF 519
Query: 415 EDELPKTATGKIQKFVLREIVNAVN 439
LPKT+TGKIQKF LRE+ + +
Sbjct: 520 -CVLPKTSTGKIQKFALREMAKSAS 543
>gi|295700840|ref|YP_003608733.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
gi|295440053|gb|ADG19222.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
Length = 544
Score = 353 bits (906), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 269/442 (60%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL----PKPVLIHDDVSATS 60
RLD + +L H E+K L VD + A A FP ++ +PV + AT
Sbjct: 103 RLDVATLLFMLRHGEAKALIVDTEYGEFAHRAALEFPELRVISVADAQPVDAAQFLRATD 162
Query: 61 SPT---VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P+++W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 163 YEQFLQTGDPSYEWTPPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNALSNILEWDMP 222
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 223 KHAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFDAKTVFELIRREHITHYCGAPIVQ 282
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ L+++P+ + + V + +GA+PP AV+ + + +GF ++H YGLTET G CA
Sbjct: 283 SSLANAPAEWREGITHRVSTMVAGAAPPPAVIAKMKQIGFDLTHVYGLTETYGPAAVCAK 342
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ +W+ L + A L ARQGVR A + V+ +T V DG++ GEI+FR M G
Sbjct: 343 QQEWDALDEQISADLTARQGVRYHLQAAVTVLDADTLAPVPDDGETIGEIMFRGNICMKG 402
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK++ + + WF+TGD+GV +DGY+ I+DRSKD+IISGGENISS EVE LY
Sbjct: 403 YLKNERATEAVFK-GGWFHTGDLGVRTADGYIRIRDRSKDIIISGGENISSIEVEDTLYR 461
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA++ A+VA D WG+ PCAF+ LK + TEE II CR L + K+V
Sbjct: 462 HPAVSVAAVVAMADPKWGEVPCAFIELK--EGAQATEEEIIAHCRLFLAGFKLPKAVRF- 518
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR + A
Sbjct: 519 GELPKTSTGKIQKFELRARIKA 540
>gi|254488480|ref|ZP_05101685.1| AMP-binding domain protein [Roseobacter sp. GAI101]
gi|214045349|gb|EEB85987.1| AMP-binding domain protein [Roseobacter sp. GAI101]
Length = 552
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 189/443 (42%), Positives = 267/443 (60%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V+ +L H E+K++ D Q L AA ++ NT P ++ D A T
Sbjct: 115 RLDVDTVTYILDHGEAKVVLADTQFIDLVEAACAVL--NT--PPRIIEVPDADAGFPATG 170
Query: 64 ----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P+F W P+ EW+ +ALNYTSGTT PKGVV+ HRG +++T+ ++I
Sbjct: 171 RHLAYEDLLAQGDPDFDWRMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVIS 230
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
WR+ +PVF+ +P+FH NGW+++W M +GGT +C R + IY+ I GVTH GA
Sbjct: 231 WRMVLRPVFMQIVPLFHCNGWNHTWMMPLLGGTLVCCRDITAAAIYNAIADEGVTHFGGA 290
Query: 174 LVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN++ +S + D V++ T+GA P A L + E+LGF V+ YGLTET G V
Sbjct: 291 PIVLNLMVNASDAERRSFDHQVEVFTAGAPPAPATLSKIEALGFNVTQVYGLTETYGHVT 350
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W S W+ L +RA +KARQGV + D+ V+ + + V DG +QGEI+ R S
Sbjct: 351 ECLWSSDWDNLQGPDRAAIKARQGVAMPMMEDITVLDADM-VQVPMDGATQGEIMIRGNS 409
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GY K+ ++ +F++GD+ + H DGY++I DR+KD+IISGGENISS EVE
Sbjct: 410 VMKGYFKNPTATAEAFA-GGYFHSGDLAIQHPDGYMQIADRAKDIIISGGENISSVEVEG 468
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VL +P +N A+VA+ D WG+ PCAFV LK K E +I F R L + K
Sbjct: 469 VLMGHPDVNLAAVVAKPDDKWGEVPCAFVELK--PGKTGDETEMIAFTRKTLAGFKTPKK 526
Query: 412 VIIEDELPKTATGKIQKFVLREI 434
V+ + ELPKT+TGKIQKF LR++
Sbjct: 527 VVFQ-ELPKTSTGKIQKFELRKL 548
>gi|294084932|ref|YP_003551692.1| acyl-CoA synthase [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664507|gb|ADE39608.1| acyl-CoA synthase [Candidatus Puniceispirillum marinum IMCC1322]
Length = 538
Score = 352 bits (902), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 185/445 (41%), Positives = 274/445 (61%), Gaps = 21/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
R++ + ++ +L +S+S+LL VD +AAL L + PV+ D + P +
Sbjct: 101 RIEAETIAYILDNSDSRLLIVDTAFHETVVAALKLLDRDI----PVIDIRDPALGDVPHI 156
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +++ W PE EW +AL+YTSGT+ PKGVV+ HRG ++++V ++
Sbjct: 157 GDRDYEAFIATGDKDYDWELPEDEWQAIALSYTSGTSGRPKGVVYHHRGSYLMSVGTVTA 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P +L+ +PMFH NGW ++W MA + T + R + I+ I+ H +TH GA
Sbjct: 217 WELPRHPTYLYVVPMFHCNGWGHAWTMALMAATIVLTRTITAASIFEDIEKHKITHFGGA 276
Query: 174 LVVLNMLSSSPS-TKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VL++L ++P T+P LD +K+LT+GA PPAA+L +T ++G V YGLTET G V
Sbjct: 277 PIVLSLLVNAPEDTRPKLDYKIKVLTAGAPPPAAMLEKTAAMGLEVMQVYGLTETYGHVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+++W+ L E+A +++ QG+ + VV TG V DG++QGEIV R
Sbjct: 337 QCLWRAEWDALTFAEQADIQSWQGIAFPVVEGSAVVESATGKEVPRDGETQGEIVVRGNV 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GY KD E +S MRD WFY+GD V H +GY++IKDR KDVIISGGENISS EVE
Sbjct: 397 VMKGYYKDAEATSAAMRDG-WFYSGDAAVWHKNGYVQIKDRLKDVIISGGENISSVEVEG 455
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
LY +P + A+VA+ D WG+ P AFV L+ ++ TE ++E+CR ++ + K+
Sbjct: 456 YLYRHPDVIAAAVVAKPDDKWGEVPYAFVELRDGVTI--TEAELLEWCRGQMAGFKRPKA 513
Query: 412 VIIEDELPKTATGKIQKFVLREIVN 436
+ ELPKT+TGKIQKFVLR+ +
Sbjct: 514 IKF-GELPKTSTGKIQKFVLRQSIQ 537
>gi|377811496|ref|YP_005043936.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
gi|357940857|gb|AET94413.1| AMP-dependent synthetase and ligase [Burkholderia sp. YI23]
Length = 547
Score = 351 bits (901), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 189/447 (42%), Positives = 266/447 (59%), Gaps = 20/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E+K + VD + S AL+ P ++ + + D A + +
Sbjct: 103 RLDAGTLTYMLTHGEAKAVLVDREFSETMRRALADVPQKVLV---IDVDDPQYAGAGERI 159
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P ++W P EW+ + LNYTSGTT +PKGVV+ HRG + +S++++
Sbjct: 160 GEIDYEALLASGDPAYEWSPPSDEWNAICLNYTSGTTGNPKGVVYHHRGAYTNAISNILE 219
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P V+LWTLPMFH NGW + W +AA G N+CLRK++ ++ +I+ GVTH CGA
Sbjct: 220 WDMPTHAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKIEAKTVFDLIREEGVTHYCGA 279
Query: 174 LVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V N+L ++P + + V + +GA PPA ++ E +GF ++H YGLTE G
Sbjct: 280 PIVQNLLINAPDELKAGITQKVYAMVAGAPPPATMIEGMERMGFQLTHVYGLTEVYGPAT 339
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA + +W+ L ERARL ARQGVR + V P T V DG++ GEI+FR
Sbjct: 340 VCAHQDEWSALDVHERARLNARQGVRYHLQDAVTVRDPATMERVPSDGETIGEIMFRGNI 399
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
M GYLK+ + R WF+TGD+ V + DGY+ IKDRSKD+IISGGENISS EVE
Sbjct: 400 AMKGYLKNTAATEDAFR-GGWFHTGDLAVAYPDGYVRIKDRSKDIIISGGENISSIEVED 458
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
LY +PA+ VA+VA+ D WG+ PCAFV LK T E +I C+ L + ++
Sbjct: 459 ALYRHPAVLAVAVVAKPDARWGETPCAFVELK--PGAHATAEELIAHCKTELAGFKVPRA 516
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
+ ELPKT+TGKIQKF LR+I +V
Sbjct: 517 IEFR-ELPKTSTGKIQKFELRKIAGSV 542
>gi|358639292|dbj|BAL26589.1| acetyl-CoA synthetase [Azoarcus sp. KH32C]
Length = 546
Score = 351 bits (901), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 199/445 (44%), Positives = 269/445 (60%), Gaps = 26/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ L H E+K+L D + + + AL L PKP++I D P+
Sbjct: 103 RLDAEAIAFQLDHGEAKVLITDPEFAAIVSRALELMKG----PKPLVI--DTLDPEYPST 156
Query: 65 --------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G P F W P EWD ++LNYTSGTT +PKGVV+ HRG ++ S+
Sbjct: 157 ERCGEIEYEDLLAGGDPEFAWSLPPDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASN 216
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+I W +P V+LWTLPMFH NGW + W +AA G N+CLRKVDV +IY +I+ H V+H+
Sbjct: 217 IISWGMPQHAVYLWTLPMFHCNGWCFPWTVAANAGVNVCLRKVDVALIYELIRKHKVSHL 276
Query: 171 CGALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V ML ++P +D V L +GA+PPAA++ E +GF ++H YGLTET G
Sbjct: 277 CGAPIVHGMLINAPEGMRAGIDHKVSALIAGAAPPAAIIEGMERIGFDITHVYGLTETYG 336
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA +W+ L RA RQGVR + V++PET V DG++ GE++FR
Sbjct: 337 PAAVCAKHPEWDDLPIANRAERNGRQGVRYHMQEAITVINPETMEPVPADGETMGEVMFR 396
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M GYLK+++ + WF+TGD+GV+ DGY++IKDRSKDVIISGGENISS E
Sbjct: 397 GNLVMKGYLKNEKATQEAFA-GGWFHTGDLGVMQPDGYVKIKDRSKDVIISGGENISSLE 455
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +PA+ A+VA+ D WG+ P A++ +K + T E II CR L Y
Sbjct: 456 VEDVLYRHPAVMTAAVVAKPDPKWGEVPAAYIEIK--EGAQVTAEDIIAHCREHLARYKV 513
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
K + LPKT+TGKIQKFVLRE
Sbjct: 514 PKYIEF-CVLPKTSTGKIQKFVLRE 537
>gi|433776462|ref|YP_007306929.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mesorhizobium
australicum WSM2073]
gi|433668477|gb|AGB47553.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mesorhizobium
australicum WSM2073]
Length = 546
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 197/452 (43%), Positives = 267/452 (59%), Gaps = 29/452 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-HDDVS-ATSSP 62
RLD ++ L H+E+K+L VD + S + AL L + KP++I +DD AT +P
Sbjct: 102 RLDAAVIAFQLDHAETKVLIVDREFSGVVREALGL-----AVVKPLVIDYDDPEYATDAP 156
Query: 63 --------TV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
TV G F W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++
Sbjct: 157 YPKGERVGTVDYEAFVANGDEAFAWSMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALM 216
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++ I + V+LWTLPMFH NGW + W +A GT++CLR V IY I +G
Sbjct: 217 AYTNTIHAGMAKHAVYLWTLPMFHCNGWCFPWTLAVQAGTHVCLRWVRPKPIYDAIADYG 276
Query: 167 VTHICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH+CGA VV+++L + + + V T+ A PP AVL GF V+H YGLT
Sbjct: 277 VTHLCGAPVVMSVLINAKDEDKRAFAQTVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLT 336
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G V W + W+ L RA KARQGVR L + V+ PET DG++ GE
Sbjct: 337 ETYGPAVVNEWHNGWDALDKGARAGKKARQGVRYAALEGLTVMDPETMAETPADGETIGE 396
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++FR +M GYLK++ + WF++GD+GV+H DGY+++KDRSKD+IISGGENI
Sbjct: 397 VMFRGNIVMKGYLKNRRATDEAF-GGGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENI 455
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE LY +PA+ +VA+ D WG+ P A+V LK K+ +E IIE CR L
Sbjct: 456 SSIEVEEALYKHPAVASCGVVARHDDKWGEVPVAYVELK--PGKEASEAEIIEHCRTLLA 513
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVN 436
+ K+VI E+PKT+TGKIQKF LRE+
Sbjct: 514 RFKVPKAVIFA-EIPKTSTGKIQKFRLREMAK 544
>gi|254451651|ref|ZP_05065088.1| AMP-dependent synthetase and ligase [Octadecabacter arcticus 238]
gi|198266057|gb|EDY90327.1| AMP-dependent synthetase and ligase [Octadecabacter arcticus 238]
Length = 546
Score = 351 bits (900), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 184/444 (41%), Positives = 270/444 (60%), Gaps = 24/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L H+ SK++ VD + PL AL+L + P++I DD +
Sbjct: 103 RLDAAIIAFQLDHAMSKIIIVDAEFMPLMQEALALAEVS-----PLVIQVDDPEYEGAKA 157
Query: 64 V------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P F W+ P EWD +++NYTSGTT PKGVV HRG +++ +
Sbjct: 158 AFDGGGYESFLADGDPAFAWLMPADEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNA 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I + V+LWTLPMFH NGW + W ++A+ GT++CLR+V I++ + VTH+C
Sbjct: 218 ITTSMRKHAVYLWTLPMFHCNGWCFPWTLSAIIGTHVCLRQVRAEPIWNALADDNVTHLC 277
Query: 172 GALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V+++L ++P + + LD V+ T+ A PP +L ++ GF V+H YGLTET G
Sbjct: 278 GAPIVMSLLIAAPVDARRTLDHTVQFFTAAAPPPEKLLADMKTAGFDVTHLYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V W W++L + E+ARLK+RQGVR + L +DV+ PET +V DG + GE++FR
Sbjct: 338 AVVNDWHESWSSLPNDEQARLKSRQGVRYLPLEGLDVLDPETLHAVPRDGVTMGEVMFRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY ++ + + WF++GD+GVVH DGY+++KDRSKD+IISGGENISS E+
Sbjct: 398 NVVMKGYFRNPVATKKAF-EGGWFHSGDLGVVHPDGYIQLKDRSKDIIISGGENISSIEI 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY P+I A+VA + WG+ PCAF+ L ++ +A+ +CR RL Y
Sbjct: 457 EEVLYSYPSIEIAAVVAMPHEKWGETPCAFIEAT--LGQEIDTDALRVWCRDRLAAYKVP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
++ +P+T+TGKIQKFVLRE
Sbjct: 515 GRFVVT-SVPRTSTGKIQKFVLRE 537
>gi|149201273|ref|ZP_01878248.1| acyl-CoA synthase [Roseovarius sp. TM1035]
gi|149145606|gb|EDM33632.1| acyl-CoA synthase [Roseovarius sp. TM1035]
Length = 548
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 187/443 (42%), Positives = 266/443 (60%), Gaps = 24/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ L H+ ++++ VD + PL AL+L + P+LI D S P +
Sbjct: 103 RLDAGIIAFQLDHAMARVVIVDREFMPLMQEALAL-----VKVTPLLIQYDDPEFSGPEI 157
Query: 65 -------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P+F W+ PE EWD +++NYTSGTT PKGVV HRG +++ +
Sbjct: 158 AATAQDYEAFLSAGDPSFDWLMPEDEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNA 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ + V+LWTLPMFH NGW + W ++A+ GT+ICLR+V I+ + VTH+C
Sbjct: 218 LTTSMAKHAVYLWTLPMFHCNGWCFPWTLSAIIGTHICLRQVRAEPIWEALAQERVTHLC 277
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V++++ S+P T +PLD V+ T+ A PP +L + GF V+H YGLTET G
Sbjct: 278 GAPIVMSLMISAPETVKRPLDHTVQFFTAAAPPPEKLLADMKDAGFDVTHLYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V W W+TL +E+ARLK+RQGVR + L +DV+ PET V DG + GE++FR
Sbjct: 338 AVVNDWHDSWSTLPASEQARLKSRQGVRYLALEGLDVLDPETMNPVPRDGTTMGEVMFRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY ++ + + WF++GD+GV H DGY+++KDRSKDVIISGGENISS EV
Sbjct: 398 NVVMKGYFRNPKATQEAFA-GGWFHSGDLGVRHPDGYIQLKDRSKDVIISGGENISSIEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA+ A+VA + WG+ PCAFV L + E + +CR L Y
Sbjct: 457 EEALYRHPAVAVTAVVAMPHEKWGETPCAFVELA--DGQAADAETLRAWCRDHLAPYKVP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
+ E+P+T+TGKIQKF+LR
Sbjct: 515 GRFVFT-EIPRTSTGKIQKFLLR 536
>gi|83949843|ref|ZP_00958576.1| AMP-binding protein [Roseovarius nubinhibens ISM]
gi|83837742|gb|EAP77038.1| AMP-binding protein [Roseovarius nubinhibens ISM]
Length = 542
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 195/453 (43%), Positives = 263/453 (58%), Gaps = 38/453 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL+ +S + H E++L VD PLA AA++ P+ V + D P
Sbjct: 103 RLEPDTISYIFGHGEAQLALVDTALLPLAEAAIARMKGKG--PQIVEVAD-------PQA 153
Query: 65 GHP-----------------NFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
G+P +F W+ P+ EW+ +ALNYTSGTT PKGVV+ HRG +++T
Sbjct: 154 GYPATGRYLEYEDFLASGDEDFNWIMPKDEWESLALNYTSGTTGRPKGVVYHHRGAYLMT 213
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+ + + W +P+Q +L +P+FH N W++SW M VGG +C R + IY I GV
Sbjct: 214 MGTAVSWPMPHQARYLTIVPLFHCNNWNHSWMMPLVGGCVVCCRDITARAIYDAIADDGV 273
Query: 168 THICGALVVLNMLSSSPSTKPLDRP-----VKILTSGASPPAAVLLRTESLGFVVSHSYG 222
TH+ GA +VLNM+ ++ KP DR V+ T+GA PPAA L E LGF V+ YG
Sbjct: 274 THMGGAPIVLNMIVNA---KPEDRRAFDHIVQTYTAGAPPPAATLRAIEPLGFSVTQVYG 330
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTET G V C W ++W+ D ER +KAR GV + D+ + PET V DG +Q
Sbjct: 331 LTETYGHVTECTWHARWDGEEDEERYAIKARTGVLMPMMEDITALDPETMKQVPMDGATQ 390
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GEI+ R ++M GYLK+ E + + +F++GDI H DGYL+I DR+KD+IISGGE
Sbjct: 391 GEIMIRGNAVMKGYLKNPEATKEAFK-GGYFHSGDIAFQHPDGYLKIADRAKDIIISGGE 449
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS EVE VL +P + A+VA+ D WG+ PCAFV LK E AII F R R
Sbjct: 450 NISSIEVEGVLMKHPEVLLCAVVAKPDDKWGEVPCAFVELK--EGAVCDEAAIIAFARER 507
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIV 435
L + K V + ELPKT+TGKIQKF LR+I
Sbjct: 508 LAGFKTPKQVRFQ-ELPKTSTGKIQKFELRKIA 539
>gi|110681107|ref|YP_684114.1| AMP-binding protein [Roseobacter denitrificans OCh 114]
gi|109457223|gb|ABG33428.1| AMP-binding domain protein [Roseobacter denitrificans OCh 114]
Length = 540
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 186/442 (42%), Positives = 268/442 (60%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD V+ +L H E++++ VD Q LA AA + S P + + D V+ +
Sbjct: 103 RLDVDTVAYILEHGEARMVLVDSQFLDLAEAACATLASP---PTLIEVPDAVAGIEASGR 159
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G +F W+ P+ EW+ +ALNYTSGTT PKGVV+ HRG +++T+ ++I W
Sbjct: 160 HQTYEDLIAAGTTDFDWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISW 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
R+ P F+ +P+FH NGW+++W M +GGT +C R + P I++ I VTH GA
Sbjct: 220 RMTLHPTFMQIVPLFHCNGWNHAWMMPLIGGTLVCCRDITAPAIFNAIADEKVTHFGGAP 279
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLNML ++PS + ++ PV+I T+GA P A L + E+LGF V+ YGLTET G V
Sbjct: 280 IVLNMLVNAPSEERRTIEHPVEIFTAGAPPAPATLAKVEALGFNVTQVYGLTETYGHVTE 339
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C W+S+W+ +A +K+RQGV + D+ V+ + V D +QGEI+ R S+
Sbjct: 340 CLWRSEWDGHEAEAKAAIKSRQGVPFPMMEDIVVMDADM-TPVPTDASTQGEIMIRGNSV 398
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GY K+ + +S +F++GDI V H D Y++I DR+KD+IISGGENISS EVE V
Sbjct: 399 MKGYYKNPQATSEAFA-GGYFHSGDIAVQHDDSYIQIADRAKDIIISGGENISSVEVEGV 457
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L + + A+VA+ D WG+ PCAFV LK E + E +I F R L + A K V
Sbjct: 458 LMAHDDVMLAAVVAKPDDKWGEVPCAFVELKPEATVD--EAGLIAFSRETLAGFKAPKKV 515
Query: 413 IIEDELPKTATGKIQKFVLREI 434
+ + ELPKT+TGKIQKF LR++
Sbjct: 516 VFQ-ELPKTSTGKIQKFELRKL 536
>gi|254485686|ref|ZP_05098891.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
gi|214042555|gb|EEB83193.1| AMP-dependent synthetase and ligase [Roseobacter sp. GAI101]
Length = 547
Score = 350 bits (899), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 266/444 (59%), Gaps = 24/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD ++ L H+ S+++ VD + PL AL+L +P++I
Sbjct: 104 RLDAAIIAFQLDHAMSRIVIVDSEFMPLMQEALALAEV-----RPLVIQVDDPEYDGTTE 158
Query: 54 --DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D S G P F W+ PE EWD +++NYTSGTT PKGVV HRG +++ +
Sbjct: 159 AFDGADYESFLAEGDPAFAWLMPEDEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNA 218
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ + V+LWTLPMFH NGW + W ++A+ GT++CLR+V I++ + VTH+C
Sbjct: 219 LTTSMRKHAVYLWTLPMFHCNGWCFPWTLSAIIGTHVCLRQVRAEPIWNALADEKVTHLC 278
Query: 172 GALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V++++ S+P + + LD V+ T+ A PP +L ++ GF V+H YGLTET G
Sbjct: 279 GAPIVMSLMISAPAETQRALDHTVQFFTAAAPPPEKLLADMQTAGFEVTHLYGLTETYGP 338
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V W W++L E+ARLK+RQGVR + L +DV+ PET V DG + GE++FR
Sbjct: 339 AVVNDWHESWSSLPSGEQARLKSRQGVRYLPLEGLDVLDPETMQPVPRDGVTMGEVMFRG 398
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY ++ + + + WF++GD+GVVH DGY+++KDRSKD+IISGGENISS EV
Sbjct: 399 NVVMKGYFRNPQATQTAF-EGGWFHSGDLGVVHPDGYIQLKDRSKDIIISGGENISSIEV 457
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY P++ A+VA WG+ PCAF+ K + +A+ +CR RL Y
Sbjct: 458 EEVLYSYPSVEIAAVVAMPHPKWGETPCAFIEPK--SGHEIDTDALRTWCRERLAAYKVP 515
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
++ +P+T+TGKIQKF LR+
Sbjct: 516 GKFVVT-TIPRTSTGKIQKFALRD 538
>gi|119503919|ref|ZP_01626001.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
gi|119460427|gb|EAW41520.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2080]
Length = 539
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 187/445 (42%), Positives = 272/445 (61%), Gaps = 27/445 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD + +L H E+ +L VD + S +A A+ L L+ D+ T P
Sbjct: 101 RLDASTLGYILEHGEASVLLVDTEFSAVAAEAVRLSGRE-------LLVIDIEDTEGPGG 153
Query: 63 ------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G +F + P+ EWD +ALNYTSGTT PKGVV+ HRG + +V++
Sbjct: 154 ACIGALTYEALLAEGSEDFAYALPDDEWDALALNYTSGTTGHPKGVVYSHRGAWTNSVNN 213
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
++ W +P+ P +LWTLP+FH NGW + W + + GT++ +R IY+ HGVTH+
Sbjct: 214 VVTWEMPHHPTYLWTLPLFHCNGWCFPWTITLLAGTHVFMRGPTAKGIYAAFAEHGVTHL 273
Query: 171 CGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA ++++M++S+P+ +P D+ V+++T+ A PPA V+ E +G ++H YGLTE G
Sbjct: 274 CGAPIIMSMIASAPNDERQPFDQKVRMMTAAAPPPAPVIEAMEQMGIAITHVYGLTEVYG 333
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
V CA K +W L E+++LKARQGV D+ V+ PET + V DG++QGE+VFR
Sbjct: 334 PAVVCAEKPEWAALPLDEQSKLKARQGVAYELEEDVLVLDPETSLPVPLDGETQGEVVFR 393
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M GYLK E + RD WF++GD+ V H DGY+EI+DR+KD+IISGGENISS E
Sbjct: 394 GNIVMKGYLKRPEETDAAFRDG-WFWSGDLAVQHPDGYIEIRDRAKDIIISGGENISSIE 452
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE+ L+ +PA++ VA+VA D+ WG+ PCAFV L TE+ +++ RA L +
Sbjct: 453 VENALHTHPAVDFVAVVAMADEKWGETPCAFVELV--EGSTATEQELLDHARALLAGFKR 510
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
K V+ LPKT TGKI+K LR+
Sbjct: 511 PKKVVF-GPLPKTTTGKIRKNELRD 534
>gi|421467749|ref|ZP_15916341.1| long-chain-fatty-acid--CoA ligase [Burkholderia multivorans ATCC
BAA-247]
gi|400233292|gb|EJO62854.1| long-chain-fatty-acid--CoA ligase [Burkholderia multivorans ATCC
BAA-247]
Length = 550
Score = 350 bits (898), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 195/444 (43%), Positives = 268/444 (60%), Gaps = 13/444 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVD------YQSSPLALAALSLFPSNTILP-KPVLIHDDVS 57
RLD V +L H E+K+L VD Q + L L AL + +P P V
Sbjct: 102 RLDAASVLFMLRHGEAKVLIVDTEYADIAQRAALELPALKIVSVADAMPADPARFARAVD 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFVAAGDPDYAWTPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAELREGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ L+D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWDALSDDERARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+++ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNEKATDEAFH-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE I+ CR L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELRDGASA--TEEEIVAHCRQLLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNAVN 439
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRHAVGSAG 541
>gi|407778401|ref|ZP_11125665.1| AMP-dependent synthetase and ligase [Nitratireductor pacificus
pht-3B]
gi|407299772|gb|EKF18900.1| AMP-dependent synthetase and ligase [Nitratireductor pacificus
pht-3B]
Length = 547
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 187/454 (41%), Positives = 266/454 (58%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPV-------------- 50
RLD ++ L H+ES+++ VD + S + AL+L ++
Sbjct: 103 RLDAAVLAFQLDHAESRVVIVDREFSGVMKEALALASVTPLVIDYDDPDYPADAPYAKGE 162
Query: 51 ----LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
+ ++D A+ G F W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++
Sbjct: 163 RIGGIDYEDFVAS-----GDGGFAWSMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALM 217
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++ + + PV+LWTLPMFH NGW + W +A GG ++CLR V +Y I HG
Sbjct: 218 AYANTVHAGLGRHPVYLWTLPMFHCNGWCFPWTLALTGGVHVCLRWVRAGAMYDAIADHG 277
Query: 167 VTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH+CGA VV++ L ++P + + V T+ A PP +VL GF V+H YGLT
Sbjct: 278 VTHLCGAPVVMSALLNAPDAEKRAFTQTVVFNTAAAPPPESVLSGMAEAGFQVTHLYGLT 337
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G V WK W+ L +A KARQGVR L + V+ PET DG++ GE
Sbjct: 338 ETYGPAVVNEWKEDWDGLDGAGQAARKARQGVRYAALEGLTVMDPETMEPTPADGETIGE 397
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++FR +M GYLK++ S WF++GD+GV+H DGY+++KDRSKD+IISGGENI
Sbjct: 398 VMFRGNIVMKGYLKNRAASDEAFA-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENI 456
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE LY +PA+ +VA+ D+ WG+ P AFV LK + +EE +++ CRA L
Sbjct: 457 SSIEVEDALYKHPAVAACGVVAKADEKWGETPVAFVELK--PGRTASEEELLDHCRAHLA 514
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+ K ++ E+PKT+TGKIQKF LRE+ A+
Sbjct: 515 RFKCPKGIVF-SEIPKTSTGKIQKFRLREMARAL 547
>gi|224084135|ref|XP_002307223.1| predicted protein [Populus trichocarpa]
gi|222856672|gb|EEE94219.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 178/452 (39%), Positives = 272/452 (60%), Gaps = 23/452 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD +++ L E+KL+FVDYQ + + L AL L + P +++ + +SS
Sbjct: 99 RLDASTLALALEQLEAKLIFVDYQFTDVVLKALDLLSQKKVNPPHLVVIPECDKSSSMDR 158
Query: 63 -------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
+G +F+ ++P +E DP+++NYTSG+T PKGVV+ HR ++ +++
Sbjct: 159 KHIASDLDYNCLLEMGRDDFRIIRPNNECDPISVNYTSGSTGKPKGVVYSHRAAYLNSLA 218
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+ + + PVFLWT+ MF NGW +W MAA+GGTNICLR V II+ + H VTH
Sbjct: 219 EIFRFDMRQMPVFLWTVDMFRCNGWCLTWAMAALGGTNICLRNVSADIIFDAVSLHKVTH 278
Query: 170 ICGALVVLNMLSSSP----STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
CG +LN ++++P S P V ++ +G+ P + +L + E LGF V H YG+TE
Sbjct: 279 FCGPPAILNTIANAPARASSQSPFPCSVNVVVAGSLPNSEILTKVEGLGFNVYHGYGMTE 338
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
G WK + ++ + E+ ++ R+G+ + L +DV P+T SV +DG++ GE+
Sbjct: 339 ALGPATIRPWKPESDSTFEIEQEEIRRREGLHNLLLEGVDVKDPKTMESVPNDGKTIGEV 398
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
+FR +M GYLK E + ++ WF+TGD+GV H +GYL++KDR+KD+IISGGE IS
Sbjct: 399 MFRGNILMSGYLKSTEITQETLK-GGWFHTGDLGVRHPNGYLQMKDRAKDIIISGGEAIS 457
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPH 405
+ EVE+VL +P ++E A+V Q D + PCAFV LK + E IIEFC +LP
Sbjct: 458 TLEVEAVLLSHPKVSEAAVVGQPDALLNEVPCAFVKLKEGFGA--SAEEIIEFCGDQLPD 515
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
M ++++ ELP +GK+QKF +RE VNA
Sbjct: 516 LMIPRTIVF-GELPVNFSGKVQKFAMRETVNA 546
>gi|114769345|ref|ZP_01446971.1| acyl-CoA synthase [Rhodobacterales bacterium HTCC2255]
gi|114550262|gb|EAU53143.1| acyl-CoA synthase [Rhodobacterales bacterium HTCC2255]
Length = 542
Score = 350 bits (897), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 181/444 (40%), Positives = 273/444 (61%), Gaps = 24/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-HDDVSATSSPT 63
RLD +S L+H+E+K+ +D + LA AL +I KP++I +DD+
Sbjct: 102 RLDASTISFQLNHAETKVFIIDNEYMALAQEALK-----SIDIKPIIIEYDDLEYLGKKE 156
Query: 64 ------------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G F W+ PE+EWD +++NYTSGTT PKGVV HRG +++ +
Sbjct: 157 EFESINYEEFIDQGDDAFNWLMPENEWDAISINYTSGTTGRPKGVVTHHRGAYLLAQGNA 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ +P ++LWTLPMFH NGW + W M+A+ GT++CLR+V I+ +I H V+H+C
Sbjct: 217 LTISMPKHSIYLWTLPMFHCNGWCFPWTMSAISGTHVCLRQVRADKIWHLISEHKVSHLC 276
Query: 172 GALVVLNMLSSS--PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V++++ ++ + L+ V+ LT+ A PP +L GF V+H YGLTET G
Sbjct: 277 GAPIVMSVIVNALQSEKRKLNHTVEFLTAAAPPPEKILTGMNLSGFNVTHLYGLTETYGP 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V W+ W+ L + E+A+LK+RQGVR + L +DV+ P T V DG+S GE++FR
Sbjct: 337 AVVNDWQENWSKLPEEEQAKLKSRQGVRYLPLEGLDVLDPATMKPVPRDGKSLGEVMFRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY K+ + ++ + WF++GD+GV+H DGYL++KDRSKD+IISGGENISS E+
Sbjct: 397 NVVMKGYFKNPKATNEAFK-GGWFHSGDLGVMHPDGYLQLKDRSKDIIISGGENISSIEI 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY + ++ A+VA + WG+ PCAFV + E ++ +C+ L Y
Sbjct: 456 EEVLYSHNSVEIAAVVAMPHEKWGETPCAFVQIA--EGHCINENDLMVWCKKFLASYKIP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K II++ +P+T+TGKIQKF+LR+
Sbjct: 514 KKFIIKN-IPRTSTGKIQKFLLRD 536
>gi|337270199|ref|YP_004614254.1| AMP-dependent synthetase and ligase [Mesorhizobium opportunistum
WSM2075]
gi|336030509|gb|AEH90160.1| AMP-dependent synthetase and ligase [Mesorhizobium opportunistum
WSM2075]
Length = 546
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/452 (43%), Positives = 265/452 (58%), Gaps = 29/452 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD ++ L H+E+K+L VD + S + AL L +N KP++I
Sbjct: 102 RLDAAVIAFQLDHAETKVLIVDREFSGVVGQALEL--ANV---KPLVIDYDDPDYAADAP 156
Query: 54 ----DDVSATSSPTV---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
+ + A + G +F W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++
Sbjct: 157 YPKGERIGALDYEDLVAGGDADFAWSMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALM 216
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++ I + V+LWTLPMFH NGW + W MA GT++CLR V IY I HG
Sbjct: 217 AYTNTIHAGMAKHAVYLWTLPMFHCNGWCFPWTMAVQAGTHVCLRWVRPKPIYDAIADHG 276
Query: 167 VTHICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH+CGA VV+++L + + + V T+ A PP AVL GF V+H YGLT
Sbjct: 277 VTHLCGAPVVMSVLINARDEDKRTFAQTVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLT 336
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G V W +W+ LA ER+ KARQGVR L + V+ PET DG++ GE
Sbjct: 337 ETYGPAVVNEWHGEWDGLAKGERSAKKARQGVRYAALEGLTVMDPETMRMTPADGETIGE 396
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++FR +M GYLK+++ S WF++GD+GV+H DGY+++KDRSKD+IISGGENI
Sbjct: 397 VMFRGNIVMKGYLKNRKASDEAFA-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENI 455
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE LY + ++ +VA+ D WG+ P A+V LK K TE IIE CR L
Sbjct: 456 SSIEVEDALYKHSSVASCGVVARADDKWGEVPIAYVELK--PGKSATEAEIIEHCRGLLA 513
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVN 436
+ K+VI E+PKT+TGKIQKF LRE+
Sbjct: 514 RFKVPKAVIFA-EIPKTSTGKIQKFRLREMAK 544
>gi|254467211|ref|ZP_05080622.1| AMP-dependent synthetase and ligase [Rhodobacterales bacterium Y4I]
gi|206688119|gb|EDZ48601.1| AMP-dependent synthetase and ligase [Rhodobacterales bacterium Y4I]
Length = 542
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 197/445 (44%), Positives = 268/445 (60%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD V+ + H E+K + VD Q LA AA+ P P+LI D AT T
Sbjct: 103 RLDTGTVAYIFEHGEAKAVLVDPQFLELAEAAVEEMEG----PAPILIEVADDQATWHAT 158
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P+F+WV PE EW+ +ALNYTSGTT PKGVV+ HRG +++T+ +++
Sbjct: 159 GRHMEYEALLASGDPDFQWVMPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVV 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ PV+L +P+FH NGW+++W M VGGT +C R + IY+ I + GVTH G
Sbjct: 219 SWRMVLHPVYLTIVPLFHCNGWNHTWMMPLVGGTLVCCRDISAQNIYNAIHYEGVTHFGG 278
Query: 173 ALVVLNMLSSS--PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML ++ + D V++ T+GA P A L + E+LGF ++H YGLTET G V
Sbjct: 279 APIVLNMLVNALDEERRTFDHTVEVFTAGAPPAPATLSKIENLGFNITHVYGLTETFGHV 338
Query: 231 VSCAWK-SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C WK ++W+ L A K+RQGV L + V E + + DGQSQGEI R
Sbjct: 339 TECYWKAAEWDGLDKAGIAAKKSRQGVAMPMLEPVVVRDSEHNV-LPMDGQSQGEIALRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + ++ + +F +GD+ V H DGY++I DR+KD+IISGGENISS EV
Sbjct: 398 NVVMKGYLKNPDATAEAFK-GGYFNSGDLAVQHPDGYIQIADRAKDIIISGGENISSVEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VL +P + A+ A D+ WG+ PCAFV LK S E A+I F R L + A
Sbjct: 457 EGVLMAHPDVLLAAVAAMPDEKWGEVPCAFVELKPGASTD--EAALIAFSRETLAGFKAP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREI 434
K V+ + ELPKT+TGKIQKF LR+I
Sbjct: 515 KKVVFQ-ELPKTSTGKIQKFELRKI 538
>gi|319784839|ref|YP_004144315.1| AMP-dependent synthetase and ligase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317170727|gb|ADV14265.1| AMP-dependent synthetase and ligase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 546
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 195/454 (42%), Positives = 265/454 (58%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-HDDVS-ATSSP 62
RLD ++ L H+E+K+L VD + S + AL L KP++I +DD A +P
Sbjct: 102 RLDAAVIAFQLDHAETKVLIVDREFSGVVKQALEL-----ARVKPLVIDYDDPEYAADAP 156
Query: 63 ----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
G +F W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++
Sbjct: 157 YPKGERVGSLDYEAFVAGGDADFAWSMPDDEWDAISLNYTSGTTGNPKGVVYHHRGAALM 216
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++ I + V+LWTLPMFH NGW + W +A GT++CLR V IY I G
Sbjct: 217 AYTNTIHAGMAKHAVYLWTLPMFHCNGWCFPWTLAVQAGTHVCLRWVRPKPIYDAIADQG 276
Query: 167 VTHICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH+CGA VV+++L + + + V T+ A PP AVL GF V+H YGLT
Sbjct: 277 VTHLCGAPVVMSVLINARDEDKRAFPQTVTFNTAAAPPPEAVLSGMADAGFAVTHLYGLT 336
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G V W W+ L ER+ KARQGVR L + V+ PET + DG++ GE
Sbjct: 337 ETYGPAVVNEWHGAWDDLEKGERSARKARQGVRYAALEGLTVMDPETMRTTPADGETIGE 396
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++FR +M GYLK+++ S WF++GD+GV+H DGY+++KDRSKD+IISGGENI
Sbjct: 397 VMFRGNIVMKGYLKNRKASDEAFA-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENI 455
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE LY +P++ +VA+ D WG+ P A+V LK K TE II+ CRA L
Sbjct: 456 SSIEVEDALYKHPSVASCGVVARPDDKWGEVPVAYVELK--PGKVATEAEIIDHCRALLA 513
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
+ K+VI E+PKT+TGKIQKF LRE+
Sbjct: 514 RFKVPKAVIFA-EIPKTSTGKIQKFRLREMAKGA 546
>gi|395009043|ref|ZP_10392616.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
gi|394312909|gb|EJE50012.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Acidovorax
sp. CF316]
Length = 548
Score = 350 bits (897), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 190/445 (42%), Positives = 266/445 (59%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E++ + VD + + AL+ S P+L+ A P V
Sbjct: 102 RLDPETIAFMLDHGEARAIIVDPEFTGTLAKALAWRKSQA----PLLVLTVQDAVYGPAV 157
Query: 65 --------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G W P EWD +ALNYTSGTT +PKGVV+ HRG +S+
Sbjct: 158 QDLGGTDYDAFVAAGDAKHAWELPADEWDAIALNYTSGTTGNPKGVVYHHRGAATNAISN 217
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW + W +AA G N+CLR+V+ I+ ++ HGVTH
Sbjct: 218 VLEWDMPKGAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRRVEAQAIFDAMREHGVTHY 277
Query: 171 CGALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V ML ++P P +K + +GA+PPA+++ E +GF ++H YGLTE G
Sbjct: 278 CGAPIVHGMLVNAPDAMKAGVPAGIKAMVAGAAPPASMIEGMEKMGFDLTHVYGLTEVYG 337
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA + W+ L ERARL ARQGVR D+ V+ P T V DG++ GEI+F+
Sbjct: 338 PATVCAKHAAWDELDIGERARLNARQGVRYHLERDVRVLDPATMQPVPQDGETMGEIMFK 397
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M GYLK+ + + WF++GD+ V + DGY++IKDRSKD+IISGGENISS E
Sbjct: 398 GNIVMKGYLKNPKATDEAFA-GGWFHSGDLAVQYPDGYIKIKDRSKDIIISGGENISSIE 456
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +PA+ A+VA+ D WG+ PCAFV LK + P E I+ C+ L +
Sbjct: 457 VEDVLYRHPAVLAAAVVARPDPKWGETPCAFVELKAGATLTP--EDIVAHCKQHLAGFKV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
++V+ ELPKT+TGKIQKF LR+
Sbjct: 515 PRAVVF-GELPKTSTGKIQKFELRK 538
>gi|158423100|ref|YP_001524392.1| AMP-binding protein [Azorhizobium caulinodans ORS 571]
gi|158329989|dbj|BAF87474.1| putative AMP-binding protein [Azorhizobium caulinodans ORS 571]
Length = 541
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/449 (44%), Positives = 273/449 (60%), Gaps = 24/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD ++ + H E+K+L D + SP+ AALSL KP++I D + P
Sbjct: 102 RLDAAILAFTIDHGEAKVLITDREFSPVIKAALSLATR-----KPLVIDYDDPEYAGPGE 156
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P+F W P EWD ++LNYTSGTT PKGVV+ HRG +++V ++
Sbjct: 157 RLGAIEYEDFIAAGDPDFVWAPPADEWDAISLNYTSGTTGDPKGVVYHHRGAHLLSVGNV 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ + PV+LWTLPMFH NGW + W ++ V GT++CLR+V IY I+ H VTH+C
Sbjct: 217 VTCHMGPHPVYLWTLPMFHCNGWCFPWSVSVVAGTHVCLRQVRAKAIYEAIEDHKVTHMC 276
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V++ L ++P T +PL V +T+ A PPAAVL + GF V H YGLTE G
Sbjct: 277 GAPIVMSTLLNAPETDRRPLPHTVSFITAAAPPPAAVLAAMQEAGFNVVHVYGLTEVYGP 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V W +W+ L ERA KARQGVR L +DV+ P T V DG++ GE++FR
Sbjct: 337 AVVNDWHGEWDALPPAERAAKKARQGVRYGALEALDVLDPLTMEPVPADGETIGEVMFRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY+K+ + WF++GD+GV H DGY+++KDRSKD+IISGGENISS EV
Sbjct: 397 NVVMKGYVKNPAATDAAFA-GGWFHSGDLGVKHPDGYIQLKDRSKDIIISGGENISSIEV 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA++ A+VA+ D+ WG+ P AFV LK + E +I CRA L Y
Sbjct: 456 EDALYKHPAVSAAAVVARPDEKWGETPLAFVELK--DGAAASAEDLIAHCRAHLAAYKCP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
++++ E E+PKT+TGKIQKF LRE+ +
Sbjct: 514 RTILFE-EIPKTSTGKIQKFKLRELAKGL 541
>gi|372272067|ref|ZP_09508115.1| acyl-CoA synthetase [Marinobacterium stanieri S30]
Length = 541
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/440 (42%), Positives = 275/440 (62%), Gaps = 17/440 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---------- 54
RLD K ++ +L+H ++ + F D + S A AL+ + PK + + D
Sbjct: 102 RLDAKTMTFMLNHGKAGVFFTDREYSDRAREALAGCDAK---PKVIDVDDPLFDGGELIG 158
Query: 55 DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
D++ + G +F+W P EW +ALNYTSGTT +PKGVV+ HRG F+ +S+++ +
Sbjct: 159 DMTFEALLATGDDDFEWELPGQEWQSIALNYTSGTTGNPKGVVYHHRGAFLSALSNVVGF 218
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P+ V+LWTLPMFH NGW Y W + AV GT++CLR+ I+ + HGVTH C A
Sbjct: 219 GLPDGAVYLWTLPMFHCNGWCYPWAVTAVAGTHVCLRQPHPKPIFEALARHGVTHFCAAP 278
Query: 175 VVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLNML + P + P ++ V T GA+PPAA + E +G V H YGLTET G V
Sbjct: 279 IVLNMLINVPEEQKLPFEQQVTAATGGAAPPAATIEAMEEMGIKVVHLYGLTETYGPSVV 338
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C ++ +W+ L E+A+ +RQG+ ++ ++DM V P T V+ DG + GE+ R S+
Sbjct: 339 CDFQDEWHQLNPKEKAQKMSRQGIPSLTMSDMMVADPSTLEPVRQDGMAIGEVFLRGNSV 398
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYL + + + WF+TGD+GV H+DGY+EIKDRSKD+IISGGENIS+ E+ES
Sbjct: 399 MKGYLNNPDETRKAF-SGGWFHTGDLGVWHADGYIEIKDRSKDIIISGGENISTLEIESA 457
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P++ E A+VA D+ WG+ PCAF+++K + + + +E+ +I CR L + K V
Sbjct: 458 LYNHPSVLEAAVVAAPDEHWGEIPCAFITVK-QGTDELSEDDVITHCREYLAGFKVPKKV 516
Query: 413 IIEDELPKTATGKIQKFVLR 432
I LPKT+TGK+QK VLR
Sbjct: 517 IFTPALPKTSTGKLQKHVLR 536
>gi|407697928|ref|YP_006822716.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
gi|407255266|gb|AFT72373.1| AMP-dependent synthetase and ligase [Alcanivorax dieselolei B5]
Length = 542
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/446 (43%), Positives = 267/446 (59%), Gaps = 22/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVD---YQSSPLALAALSLFPSNTILPKPV---------LI 52
RLD ++ +L H ++K+ F D ++ S AL+ S+ P + P L
Sbjct: 104 RLDAASMAFMLDHGQAKVFFTDAEFHERSREALSRCSVSPLVVDVEDPTFEGGERVGELT 163
Query: 53 HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D++ A G +F W P EW + LNYTSGTT PKGVV+ HRG ++ +S++I
Sbjct: 164 FDELMAR-----GRDDFTWQAPADEWQAITLNYTSGTTGDPKGVVYHHRGAYLNALSNII 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+P +LWTLPMFH NGW + W + AV GT++CLR+ I+ I H VTH C
Sbjct: 219 GLGLPQGAAYLWTLPMFHCNGWCFPWAVTAVAGTHVCLRQPHPEPIFRAISEHKVTHFCA 278
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VVLNM+ ++P +P D V + T GA+PPAA + E LG + H YGLTET G
Sbjct: 279 APVVLNMMINAPEEQRRPFDHTVTVATGGAAPPAATIAAMEKLGINIVHLYGLTETYGPS 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+ C ++ W L+ E+A ARQG+ ++ + DM V +P+T V DG + GE+ R
Sbjct: 339 LVCEFQDPWADLSLEEKADKVARQGILSLSMTDMMVANPDTLTPVPRDGSTLGELFVRGH 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
S+M GYL + +G+ WF+TGD+GV + DGY+EIKDRSKD+IISGGENIS+ EVE
Sbjct: 399 SVMKGYLNNPQGTEKAFA-GGWFHTGDLGVWYEDGYVEIKDRSKDIIISGGENISTLEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SVLY +PA+ E A+VA D WG+ PCAF++LK + +EE I+ CR L + K
Sbjct: 458 SVLYAHPAVLEAAVVAGPDPHWGEIPCAFIALK--AGQAASEEDIVSHCREGLAGFKCPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLREIVN 436
V DELPKT+TGK QK VLRE +N
Sbjct: 516 KVFFVDELPKTSTGKFQKHVLREQLN 541
>gi|403049992|ref|ZP_10904476.1| acyl-CoA synthetase [Acinetobacter bereziniae LMG 1003]
Length = 548
Score = 349 bits (895), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/441 (43%), Positives = 279/441 (63%), Gaps = 16/441 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD K ++ +L H+E+K+L VD + + LA A+ + N + + D + ++S
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFATLAQEAVGMLSQNIYIIDVADVEYDKNDSTSRIG 160
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G +F+W P+ EWD ++LNYTSGTT +PKGVV+ HRG +I S++I
Sbjct: 161 QIEYEQWLQGGDTDFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNIIAC 220
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ + +LWTLP+FH NGW ++W +AA GGTNICLRK+D ++Y +I + V + CGA
Sbjct: 221 GMTPRCKYLWTLPLFHCNGWCFAWTIAANGGTNICLRKIDPELVYQLIDQYKVDYFCGAP 280
Query: 175 VVLNMLSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VL+ML ++P K + V+++ +GA+PPAA++ +G V+H YGLTET G
Sbjct: 281 IVLSMLINTPEDKQIKFKHHVEVMVAGAAPPAAIIEGMHHIGVQVNHVYGLTETYGPSAL 340
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA ++ W+ L+ E+A+L +RQGV M V+ ET V +DG++ GEI+FR +
Sbjct: 341 CASQAGWSDLSIQEQAQLHSRQGVPYPLQDGMRVLDAETMQPVPNDGKTMGEIMFRGNIV 400
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + + + WF+TGD+ V DGY +I DRSKD+IISGGENISS EVE +
Sbjct: 401 MKGYLKNTQATEEAFK-GGWFHTGDLAVCQPDGYAKIMDRSKDIIISGGENISSLEVEEI 459
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PAI A+VAQ D W + PCAF+ LK + P E +IEFC+ L + KSV
Sbjct: 460 LYTHPAIMTAAVVAQPDPRWQEVPCAFIELKQDAETTPEE--VIEFCKQHLARFKVPKSV 517
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+I E+PKT+TGK+QKF+LR+
Sbjct: 518 VI-CEIPKTSTGKLQKFILRD 537
>gi|254253962|ref|ZP_04947279.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligase II [Burkholderia
dolosa AUO158]
gi|124898607|gb|EAY70450.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligase II [Burkholderia
dolosa AUO158]
Length = 550
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/442 (44%), Positives = 269/442 (60%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V +L H E+K+L VD + + LA P+ I+ + D++ + T
Sbjct: 102 RLDIASVLFMLRHGEAKVLIVDTEYAELAQRVALELPALKIVSVADAMPADLARFARATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P++ W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S+L++W +P
Sbjct: 162 YEAFVAGGDPDYAWTPPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAEFRAGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+S W+ L+D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QSHWDALSDDERARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPKATDEAFQ-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TE+ I+ CR L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELREGASA--TEDEIVAHCRQLLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRNAVGS 539
>gi|313110912|ref|ZP_07796755.1| Putative Acyl-CoA synthetase [Pseudomonas aeruginosa 39016]
gi|386066137|ref|YP_005981441.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
gi|310883257|gb|EFQ41851.1| Putative Acyl-CoA synthetase [Pseudomonas aeruginosa 39016]
gi|348034696|dbj|BAK90056.1| acyl-CoA synthetase [Pseudomonas aeruginosa NCGM2.S1]
Length = 549
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 181/439 (41%), Positives = 269/439 (61%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL+ + ++ +L H +++L D + +A AL++ + +L V I DD + +
Sbjct: 103 RLEARSIAFILRHCAARVLICDREFGAVAQQALAMLDAPPLL---VGIDDDQAERADLAH 159
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P P++EW +A+NYTSGTT PKGVV HRG ++ + + +
Sbjct: 160 DLDYEAFLAQGDPGRPLSAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIF 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + V+LWTLPMFH NGWS++W + GGT++CLRKV I + I H VTH+ A
Sbjct: 220 QLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPDAINAAIAEHAVTHLSAAP 279
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
VV++ML + PV ++T GA+PP+AV+ E+ GF ++H+YG+TE+ G C
Sbjct: 280 VVMSMLIHAEHASVPTVPVSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCL 339
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ + L RA+ +RQGV L + V+ +TG V DG++ GE+V R ++M
Sbjct: 340 WQPGVDELPLEARAQFMSRQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMK 399
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYL + E + + D W +TGD+ V+H DGY+EIKDR+KD+IISGGENISS E+E VLY
Sbjct: 400 GYLHNPEATRAALADG-WLHTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLY 458
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + E A+VA+ D WG+ P AFV+L+ + + T + ++ +CR RL H+ A + V +
Sbjct: 459 QHPEVVEAAVVARPDSRWGETPHAFVALRADALPRTTGDDLVRWCRERLAHFKAPRHVTL 518
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKTATGKIQKFVLRE
Sbjct: 519 -TELPKTATGKIQKFVLRE 536
>gi|307943573|ref|ZP_07658917.1| acyl-CoA synthetase [Roseibium sp. TrichSKD4]
gi|307773203|gb|EFO32420.1| acyl-CoA synthetase [Roseibium sp. TrichSKD4]
Length = 546
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 189/444 (42%), Positives = 270/444 (60%), Gaps = 25/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL+ V+ +L H ++K + D + + P+ +P+L+ D V A
Sbjct: 101 RLEVDTVAYILDHGDAKAIVTDTAFHKV------MGPAIQSANRPLLVIDIVDAAGPGGK 154
Query: 65 -------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G F W P EW ++LNYTSGT+ PKGVV+ HRG +++++ +
Sbjct: 155 RLGTQTYEDLIENGDAGFAWQGPTDEWQALSLNYTSGTSGRPKGVVYHHRGSYLMSLGTP 214
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I W +P PV+L+++PMFH NGW ++W M + GT +CLR V I++ I+ HGVTH+
Sbjct: 215 IAWELPRHPVYLYSVPMFHCNGWGHAWTMTLLAGTFVCLRAVTAKNIFAAIEEHGVTHLG 274
Query: 172 GALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VL+ML ++ +PL PVK++T+GA PPAAVL T++LGF V YGLTET G
Sbjct: 275 GAPIVLSMLINAADEDKRPLQHPVKVMTAGAPPPAAVLEATKALGFEVMQVYGLTETYGH 334
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V C W+ +W+ L+ +E+A +++ QGV + DV+ ETG V DG++QGEIV +
Sbjct: 335 VTQCLWREEWDDLSASEQAEVQSWQGVAFPMTEEADVLDRETGQPVPWDGETQGEIVLQG 394
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GY KD ++ F +GD V H +GY++IKDR KDVIISGGENISS EV
Sbjct: 395 NTVMKGYYKDPNATAQAFAGGR-FKSGDAAVRHPNGYIQIKDRLKDVIISGGENISSVEV 453
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ A+VA+ D+ WG+ PCAFV LK + + E +I+F R + +
Sbjct: 454 EGVLYKHPAVAAAAVVAKPDEKWGEVPCAFVELKPDADI--SAEELIDFSRQNMAGFKRP 511
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K V+ ELPKTATGKIQKFVLR+
Sbjct: 512 KEVVF-GELPKTATGKIQKFVLRQ 534
>gi|326402856|ref|YP_004282937.1| putative fatty-acid--CoA ligase, partial [Acidiphilium multivorum
AIU301]
gi|325049717|dbj|BAJ80055.1| putative fatty-acid--CoA ligase [Acidiphilium multivorum AIU301]
Length = 382
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 183/376 (48%), Positives = 246/376 (65%), Gaps = 7/376 (1%)
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
G +F W P+ EW +ALNYTSGTT PKGVV+ HRG ++ + + I W + PV+LW
Sbjct: 10 GTADFDWRFPDDEWSAIALNYTSGTTGKPKGVVYHHRGAYLNGLGNAITWNMRQHPVYLW 69
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSP 184
TLPMFH NGW + W + A+ GT++CLR++D I + ++ HGVTH+CGA V++NM+ ++P
Sbjct: 70 TLPMFHCNGWCFPWTITALAGTHVCLRRIDAASIAAAVERHGVTHLCGAPVIMNMMINAP 129
Query: 185 STKP---LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNT 241
+ R V ++T+GA PPAAV+ E LG ++H YGLTET G V CAW+ WN
Sbjct: 130 EPQRAVYAGRGVAMMTAGAPPPAAVIEAMEGLGVDLTHVYGLTETYGPVTYCAWQEDWNG 189
Query: 242 LADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQE 301
ERA L+ARQGV V P T V DG + GE+ R +M+GYLKD
Sbjct: 190 RPAAERAALRARQGVTYAVEEGAMVADPATRAPVPADGTTMGEVFLRGNIVMMGYLKDAA 249
Query: 302 GSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
+ WF TGD+GV+H DGY+E+KDRSKD+IISGGENIS+ E+E+VLY +PA+ E
Sbjct: 250 ATEKSFA-GGWFATGDLGVMHPDGYIELKDRSKDIIISGGENISTIEIETVLYRHPAVLE 308
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKT 421
A+VA D+ WG+ PCAFV L+ +++ T E II FCR + H+ A K ++ ELPKT
Sbjct: 309 AAVVAAPDEKWGEVPCAFVVLRPDMTA--TAEEIIAFCRQNMAHFKAPKRIVFS-ELPKT 365
Query: 422 ATGKIQKFVLREIVNA 437
+TGKIQK+VLRE A
Sbjct: 366 STGKIQKYVLRERARA 381
>gi|224074311|ref|XP_002335883.1| predicted protein [Populus trichocarpa]
gi|222836175|gb|EEE74596.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 348 bits (893), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 164/245 (66%), Positives = 197/245 (80%), Gaps = 1/245 (0%)
Query: 189 LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERA 248
L PV+ILT+GA PP+AVL R ESLGFVVSH YGLTETAG V SCAWK +WNT +ERA
Sbjct: 1 LQNPVQILTAGAPPPSAVLFRAESLGFVVSHGYGLTETAGLVTSCAWKPKWNTFPASERA 60
Query: 249 RLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMR 308
LK+RQGV +G +M VV P TG SV+ DG S GE+V R GS+MLGY KD G+S+CM+
Sbjct: 61 ILKSRQGVPIVGFTEMGVVDPNTGKSVERDGVSLGEVVLRGGSVMLGYFKDPLGTSMCMK 120
Query: 309 DNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQR 368
D WFYTGD+GVVHSDGYLE+KDRSKDVIISGGENISS E+ESVLY +PA+NE A+VA+
Sbjct: 121 DG-WFYTGDVGVVHSDGYLEVKDRSKDVIISGGENISSVEIESVLYTHPAVNEAAVVARP 179
Query: 369 DKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQK 428
D+FWG+ PCAFVSLK L KP E+ II++CR ++ HYM K V+ +DELPKT+TGKIQK
Sbjct: 180 DEFWGETPCAFVSLKNGLPHKPGEKDIIDYCREKMAHYMVPKIVVFKDELPKTSTGKIQK 239
Query: 429 FVLRE 433
++LRE
Sbjct: 240 YLLRE 244
>gi|339502033|ref|YP_004689453.1| short-chain-fatty-acid--CoA ligase FadK [Roseobacter litoralis Och
149]
gi|338756026|gb|AEI92490.1| putative short-chain-fatty-acid--CoA ligase FadK [Roseobacter
litoralis Och 149]
Length = 540
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 188/443 (42%), Positives = 268/443 (60%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD V+ + H E+K++ VD Q LA AA + S P + + D V+ +
Sbjct: 103 RLDVDTVTYIFEHGEAKMVLVDSQFLDLAEAACANLASP---PTLIEVPDAVAGIEASGR 159
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
T G +F+W+ P+ EW+ +ALNYTSGTT PKGVV+ HRG +++T+ ++I W
Sbjct: 160 HQTYEDLVTGGTTDFEWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISW 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
R+ P F+ +P+FH NGW+++W M +GGT +C R + P I+ I VTH GA
Sbjct: 220 RMTLHPTFMQIVPLFHCNGWNHAWMMPLIGGTLVCCRDITAPAIFDAIADEKVTHFGGAP 279
Query: 175 VVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLNML ++P + +D PV+I T+GA P A L + E+LGF V+ YGLTET G V
Sbjct: 280 IVLNMLVNAPMEERRAIDHPVEIFTAGAPPAPATLSKIEALGFNVTQVYGLTETYGHVTE 339
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C W+S+W+ +A +K+RQGV + D+ V+ + V D +QGEI+ R S+
Sbjct: 340 CLWRSEWDGHEADAKAAIKSRQGVPFPMMEDIVVMDADM-TPVPTDASTQGEIMIRGNSV 398
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GY K+ + +S +F++GDI V H D Y++I DR+KD+IISGGENISS EVE V
Sbjct: 399 MKGYYKNPQATSEAFA-GGYFHSGDIAVQHGDSYIQIADRAKDIIISGGENISSVEVEGV 457
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHKS 411
L + + A+VA+ D WG+ PCAFV LK S +EA +I F R L + A K
Sbjct: 458 LMAHDDVMLAAVVAKPDDKWGEVPCAFVELK---SGATVDEAGLIAFSRQTLAGFKAPKK 514
Query: 412 VIIEDELPKTATGKIQKFVLREI 434
V+ + ELPKT+TGKIQKF LR++
Sbjct: 515 VVFQ-ELPKTSTGKIQKFELRKL 536
>gi|445420824|ref|ZP_21435646.1| AMP-binding enzyme [Acinetobacter sp. WC-743]
gi|444758391|gb|ELW82891.1| AMP-binding enzyme [Acinetobacter sp. WC-743]
Length = 548
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 191/441 (43%), Positives = 278/441 (63%), Gaps = 16/441 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD K ++ +L H+E+K+L VD + + LA A+ + N + + D + ++S
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFATLAQEAVGMLSQNIYIIDVADVEYDKNDSTSRIG 160
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G +F+W P+ EWD ++LNYTSGTT +PKGVV+ HRG +I S++I
Sbjct: 161 QIEYEQWLQGGDTDFEWHLPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNIIAC 220
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ + +LWTLP+FH NGW ++W +AA GGTNICLRK+D ++Y +I + V + CGA
Sbjct: 221 GMAPRCKYLWTLPLFHCNGWCFAWTIAANGGTNICLRKIDPELVYQLIDQYKVDYFCGAP 280
Query: 175 VVLNMLSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VL+ML ++P K + V+++ +GA+PPAA++ +G V+H YGLTET G
Sbjct: 281 IVLSMLINTPKDKQIKFKHHVEVMVAGAAPPAAIIEGMHHIGVQVNHVYGLTETYGPSAL 340
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA ++ W+ L+ E+A+L +RQGV M V+ ET V +DG++ GEI+FR +
Sbjct: 341 CASQAGWSDLSIQEQAQLHSRQGVPYPLQDGMRVLDAETMQPVPNDGKTMGEIMFRGNIV 400
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + + + WF+TGD+ V DGY +I DRSKD+IISGGENISS EVE +
Sbjct: 401 MKGYLKNTQATEEAFK-GGWFHTGDLAVCQPDGYAKIMDRSKDIIISGGENISSLEVEEI 459
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PAI A+VAQ D W + PCAF+ LK P E +IEFC+ L + KSV
Sbjct: 460 LYTHPAIMTAAVVAQPDPRWQEVPCAFIELKQGAETTPEE--VIEFCKQHLARFKVPKSV 517
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+I E+PKT+TGK+QKF+LR+
Sbjct: 518 VI-CEIPKTSTGKLQKFILRD 537
>gi|221196514|ref|ZP_03569561.1| AMP-dependent synthetase and ligase [Burkholderia multivorans
CGD2M]
gi|221203183|ref|ZP_03576202.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD2]
gi|221177117|gb|EEE09545.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD2]
gi|221183068|gb|EEE15468.1| AMP-dependent synthetase and ligase [Burkholderia multivorans
CGD2M]
Length = 547
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 193/444 (43%), Positives = 267/444 (60%), Gaps = 13/444 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVD------YQSSPLALAALSLFPSNTILP-KPVLIHDDVS 57
RLD V +L H E+K+L VD Q + L L L + +P P +
Sbjct: 99 RLDAASVLFMLRHGEAKVLIVDTEYADIAQRAALELPGLKIVSVADAMPADPARFARAID 158
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 159 YEAFVAAGDPDYAWTPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 218
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH CGA +V
Sbjct: 219 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQ 278
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 279 SAIANAPAELREGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 338
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ L+D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 339 QAHWDALSDDERARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 398
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+++ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 399 YLKNEKATDEAFH-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 457
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE I+ CR L + K+V
Sbjct: 458 HPAVAVAAVVAMPDPKWGEVPCAFVELRDGASA--TEEEIVAHCRQLLAGFKVPKAVRF- 514
Query: 416 DELPKTATGKIQKFVLREIVNAVN 439
ELPKT+TGKIQKF LR V +
Sbjct: 515 GELPKTSTGKIQKFQLRHAVGSAG 538
>gi|83941297|ref|ZP_00953759.1| AMP-binding protein [Sulfitobacter sp. EE-36]
gi|83847117|gb|EAP84992.1| AMP-binding protein [Sulfitobacter sp. EE-36]
Length = 541
Score = 348 bits (892), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 262/442 (59%), Gaps = 23/442 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD V +L H E+++L VD Q LA AA + P P+LI A P
Sbjct: 103 RLDVGTVGYILDHGEARVLLVDTQFVDLAEAACATLDG----PPPLLIEVPDPAAGFPAT 158
Query: 65 GH------------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F W+ P+ EW+ +ALNYTSGTT PKGVV+ HRG +++T+ +++
Sbjct: 159 GRHTTYDDFIATGDPAFNWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVV 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ +PVF+ +P+FH NGW+++W M +GGT +C R + IY I GVTH G
Sbjct: 219 SWRMVMRPVFMQIVPLFHCNGWNHTWMMPLLGGTLVCCRDITAAAIYDAIADEGVTHFGG 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNM+ ++ + D V++ T+GA P A L + E+LGF V+ YGLTET G V
Sbjct: 279 APIVLNMMVNATEAERRAFDHQVEVFTAGAPPAPATLSKIEALGFNVTQVYGLTETYGHV 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C W W++ ERA +KARQGV + ++ V+ E V D +QGEI+ R
Sbjct: 339 TECLWDPAWDSAQGAERAAIKARQGVAMPMMEEITVMDSEMA-QVPLDAATQGEIMIRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
S+M GY K+ + +F++GD+ V H +G+++I DR+KD+IISGGENISS EVE
Sbjct: 398 SVMKGYFKNPAATRAAFA-GGYFHSGDLAVQHPNGHMQIADRAKDIIISGGENISSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VL +P +N A+VAQ D+ WG+ PCAFV LK + E A+I F R L + A K
Sbjct: 457 GVLMGHPDVNLAAVVAQPDEKWGEVPCAFVELK--PGRSGDEAALIAFARDTLAGFKAPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
V+ + ELPKT+TGKIQKF LR
Sbjct: 515 RVVFQ-ELPKTSTGKIQKFELR 535
>gi|335419305|ref|ZP_08550360.1| AMP-dependent synthetase and ligase [Salinisphaera shabanensis
E1L3A]
gi|335421022|ref|ZP_08552052.1| AMP-dependent synthetase and ligase [Salinisphaera shabanensis
E1L3A]
gi|334893196|gb|EGM31414.1| AMP-dependent synthetase and ligase [Salinisphaera shabanensis
E1L3A]
gi|334896922|gb|EGM35064.1| AMP-dependent synthetase and ligase [Salinisphaera shabanensis
E1L3A]
Length = 544
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 183/438 (41%), Positives = 270/438 (61%), Gaps = 14/438 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF---PSNTILPKPVLIHDD-----V 56
RLD ++ +L E+K++FVD +P+ A+ P+ + PV ++ +
Sbjct: 103 RLDAATLAFMLEFGEAKMVFVDRAFAPVMAEAIGQMDNPPTVVDIDDPVYDGNESPIGEI 162
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ G +F+W PE EW+ ++LN+TSGTT +PKGVV+ HRG ++ +++ + W +
Sbjct: 163 EYEAFVAEGDADFQWQLPEDEWNAISLNFTSGTTGNPKGVVYHHRGAYLNAMTNAMAWDM 222
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P V+LWTLPMFH NGW + W +AA GTN+CLR+V I + HGVTH CGA +V
Sbjct: 223 PTHTVYLWTLPMFHCNGWCFPWTLAAKAGTNVCLRQVAADPIIEAMTEHGVTHYCGAPIV 282
Query: 177 LNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
+ML ++ K +++ V L +GA+PPAA++ E +GF ++H YGLTET G CA
Sbjct: 283 HSMLVNADEQKLAGIEQTVYGLVAGAAPPAAMIEGMERIGFKLTHVYGLTETYGPAALCA 342
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W ++ ER RL RQGVR A + VV +TG V HDG++ GE+VF +M
Sbjct: 343 KHESWEDVSLDERVRLNGRQGVRYPTQAALTVVDQDTGEIVPHDGETMGELVFAGNIVMK 402
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ + + + W++TGD+G + DGY++I DR+KDVIISGGENISS EVESVL
Sbjct: 403 GYLKNPDATDEAFAEG-WYHTGDLGYIEPDGYIKIADRAKDVIISGGENISSLEVESVLS 461
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ A+VA+ D+ WG+ PCAF+ L+ ++ TE II +CR + + K+V+
Sbjct: 462 RHPAVAASAVVAKPDEKWGETPCAFIELR--PGEEATEADIIAYCREHMAKFKCPKTVVF 519
Query: 415 EDELPKTATGKIQKFVLR 432
LP T+TGK+QK+ LR
Sbjct: 520 -GPLPTTSTGKVQKYELR 536
>gi|384917797|ref|ZP_10017906.1| AMP-dependent synthetase and ligase [Citreicella sp. 357]
gi|384468329|gb|EIE52765.1| AMP-dependent synthetase and ligase [Citreicella sp. 357]
Length = 541
Score = 347 bits (890), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 263/442 (59%), Gaps = 23/442 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD ++ +L H E++++ D Q P AL L + P +I
Sbjct: 103 RLDVDTIAYILDHGEARVVLCDPQFIPHLAEALELMEQD----PPAVIEVADPHGGAHAF 158
Query: 54 -DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
D + G P+F W+ PE EW+ +ALNYTSGTT PKGVV+ HRG ++ + ++
Sbjct: 159 GDYMEYEDFLQTGDPDFDWILPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLNAMGQVL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ PV+L +P+FH NGW ++W M AVGGT +C R + IY I HGVTH G
Sbjct: 219 SWRMVLHPVYLTIVPLFHCNGWCHTWMMPAVGGTVVCCRDITARNIYDAIADHGVTHFGG 278
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML ++ + +P D+ V++ T+GA P A L + E++GF V+ YGLTET G
Sbjct: 279 APIVLNMLVNAAESDRRPFDQLVEVFTAGAPPAPATLAKIETMGFNVTQVYGLTETYGPD 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V CAW+ W+ L ERA KARQGV + + VV + V DG ++GEI+ R
Sbjct: 339 VECAWQGGWDHLQGEERAARKARQGVAMPFMEHVTVVD-DAMRPVTPDGDTKGEIMHRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK + + + +F++GDI V++ D YL+I DR+KD+IISGGENISS EVE
Sbjct: 398 GVMKGYLKAPKATREAFQ-GGYFHSGDIAVLYPDSYLQIADRAKDIIISGGENISSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+ L + A+ A+VA+ D WG+ PCAFV LK + + TE +I F R RL + K
Sbjct: 457 NTLMAHEAVLLCAVVAKPDDTWGEVPCAFVELKPQHTA--TEAELIGFARQRLAGFKTPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
V+ E ELPKT+TGKIQKFVLR
Sbjct: 515 RVVFE-ELPKTSTGKIQKFVLR 535
>gi|413961541|ref|ZP_11400769.1| AMP-dependent synthetase and ligase [Burkholderia sp. SJ98]
gi|413930413|gb|EKS69700.1| AMP-dependent synthetase and ligase [Burkholderia sp. SJ98]
Length = 547
Score = 347 bits (890), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 189/447 (42%), Positives = 268/447 (59%), Gaps = 20/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E+K + VD + S + AL P + ++ + + D A + +
Sbjct: 103 RLDAATLAFMLTHGEAKAVLVDREFSDVTRRALKDVPQDVLV---IDVDDPQYAGAGERI 159
Query: 65 GH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P ++W P EW+ + LNYTSGTT +PKGVV+ HRG + VS++++
Sbjct: 160 GEIEYEALLASGDPAYEWSPPSDEWNAICLNYTSGTTGNPKGVVYHHRGAYTNAVSNILE 219
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P V+LWTLPMFH NGW + W +AA G N+CLR+VD I+ +I+ VTH CGA
Sbjct: 220 WDMPKHAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRRVDAKTIFDLIRSERVTHYCGA 279
Query: 174 LVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V N+L ++P D+ V + +GA+PPAA++ E +GF ++H YGLTE G
Sbjct: 280 PIVQNLLVNAPDDMKTGFDQKVHAMVAGAAPPAAMIEGMERMGFELTHVYGLTEVYGPAT 339
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C +++W+ L ERARL ARQGVR + V P + V DG++ GEI+FR
Sbjct: 340 VCPQQAEWSALDIGERARLNARQGVRYHLQDAVTVRDPISMELVPSDGETIGEIMFRGNI 399
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
M GYLK+ + R WF+TGD+ V + DGY+ IKDRSKD+IISGGENISS EVE
Sbjct: 400 AMKGYLKNAAATEEAFR-GGWFHTGDLAVAYPDGYVRIKDRSKDIIISGGENISSIEVED 458
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ VA+VA+ D WG+ PCAFV LK + + +I C+ L + ++
Sbjct: 459 VLYRHPAVLAVAVVAKPDTRWGETPCAFVELK--SGAHASADELIAHCKKHLAGFKVPRA 516
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
+ ELPKT+TGKIQKF LR+ +V
Sbjct: 517 IEF-CELPKTSTGKIQKFELRKRAGSV 542
>gi|83854774|ref|ZP_00948304.1| AMP-binding protein [Sulfitobacter sp. NAS-14.1]
gi|83842617|gb|EAP81784.1| AMP-binding protein [Sulfitobacter sp. NAS-14.1]
Length = 541
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 188/442 (42%), Positives = 262/442 (59%), Gaps = 23/442 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD V +L H E+++L VD Q LA AA + P P+LI A P
Sbjct: 103 RLDVDTVGYILDHGEARVLLVDTQFVDLAEAACATLDG----PPPLLIEVSDPAAGFPAT 158
Query: 65 GH------------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F W+ P+ EW+ +ALNYTSGTT PKGVV+ HRG +++T+ +++
Sbjct: 159 GRHTTYDDFIATGDPAFNWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVV 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ +PVF+ +P+FH NGW+++W M +GGT +C R + IY I GVTH G
Sbjct: 219 SWRMVMRPVFMQIVPLFHCNGWNHTWMMPLLGGTLVCCRDITAAAIYDAIADEGVTHFGG 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNM+ ++ + D V++ T+GA P A L + E+LGF V+ YGLTET G V
Sbjct: 279 APIVLNMMVNATEAERRAFDHQVEVFTAGAPPAPATLSKIEALGFNVTQVYGLTETYGHV 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C W W++ ERA +KARQGV + ++ V+ + V D +QGEI+ R
Sbjct: 339 TECLWDPAWDSAQGAERAAIKARQGVAMPMMEEITVMDSKMA-QVPLDAATQGEIMIRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
S+M GY K+ + +F++GD+ V H +G+++I DR+KD+IISGGENISS EVE
Sbjct: 398 SVMKGYFKNPAATRAAFA-GGYFHSGDLAVQHPNGHMQIADRAKDIIISGGENISSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VL +P +N A+VAQ D+ WG+ PCAFV LK + E A+I F R L + A K
Sbjct: 457 GVLMGHPDVNLAAVVAQPDEKWGEVPCAFVELK--PGRSGDEAAMIAFARDTLAGFKAPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
V+ + ELPKT+TGKIQKF LR
Sbjct: 515 RVVFQ-ELPKTSTGKIQKFELR 535
>gi|221210146|ref|ZP_03583127.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
gi|221170834|gb|EEE03300.1| AMP-dependent synthetase and ligase [Burkholderia multivorans CGD1]
Length = 547
Score = 347 bits (889), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 191/444 (43%), Positives = 268/444 (60%), Gaps = 13/444 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-------SNTILPKPVLIHDDVS 57
RLD V +L H E+K+L VD + + +A A P ++ + P +
Sbjct: 99 RLDAASVLFMLRHGEAKVLIVDTEYADIAQRAAQELPGLKLVSVADAMPADPARFAGAID 158
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 159 YEAFVASGDPDYAWHPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 218
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH CGA +V
Sbjct: 219 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQ 278
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 279 SAIANAPAELREGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 338
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ L+D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 339 QAHWDALSDDERARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 398
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+++ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 399 YLKNEKATDEAFH-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 457
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE I+ CR L + K+V
Sbjct: 458 HPAVAVAAVVAMPDPKWGEVPCAFVELRDGASA--TEEEIVAHCRQLLAGFKVPKAVRF- 514
Query: 416 DELPKTATGKIQKFVLREIVNAVN 439
ELPKT+TGKIQKF LR V +
Sbjct: 515 GELPKTSTGKIQKFQLRHAVGSAG 538
>gi|161520855|ref|YP_001584282.1| acyl-CoA synthetase [Burkholderia multivorans ATCC 17616]
gi|189352962|ref|YP_001948589.1| acyl-CoA synthetase [Burkholderia multivorans ATCC 17616]
gi|160344905|gb|ABX17990.1| AMP-dependent synthetase and ligase [Burkholderia multivorans ATCC
17616]
gi|189336984|dbj|BAG46053.1| O-succinylbenzoic acid-CoA ligase [Burkholderia multivorans ATCC
17616]
Length = 550
Score = 346 bits (888), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 191/444 (43%), Positives = 267/444 (60%), Gaps = 13/444 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-------SNTILPKPVLIHDDVS 57
RLD V +L H E+K+L VD + + +A A P ++ + P +
Sbjct: 102 RLDAASVLFMLRHGEAKVLIVDTEYADIAQRAAQELPGLKLVSVADAMPADPARFAGAID 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFVASGDPDYAWHPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAELREGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ W+ L+D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QGHWDALSDDERARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+++ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNEKATDEAFH-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE I+ CR L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELRDGASA--TEEEIVAHCRQLLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNAVN 439
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRHAVGSAG 541
>gi|358011464|ref|ZP_09143274.1| acyl-CoA synthetase [Acinetobacter sp. P8-3-8]
Length = 548
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 190/444 (42%), Positives = 280/444 (63%), Gaps = 22/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K ++ +L H+E+K+L VD + + LA A++L P + + + D + T
Sbjct: 101 RLDAKTIAFMLEHAETKVLLVDPEFATLAEEAVALVPQQIYI---IDVADAEYEKNDTTA 157
Query: 65 -------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G NF+W P EWD ++LNYTSGTT +PKGVV+ HRG ++ S++
Sbjct: 158 RIGQIEYEDWIKGGDVNFEWHLPNDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNI 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ + + +LWTLP+FH NGW ++W +AA GGTNICLRKVD ++Y +I H + ++C
Sbjct: 218 LACGMTPRCKYLWTLPLFHCNGWCFAWTIAANGGTNICLRKVDPALVYQLIDQHKIDYLC 277
Query: 172 GALVVLNMLSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VL+ML ++P K + + V+++ +GA+PPAA++ +G V+H YGLTET G
Sbjct: 278 GAPIVLSMLINTPKDKQIKFNHHVEVMVAGAAPPAAIIEGMHHIGIQVNHVYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
CA ++ W+ L+ E+A+L +RQGV M V+ PET V +DG + GEI+FR
Sbjct: 338 SALCASQAGWSELSIQEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPNDGTTMGEIMFRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + + + WF++GD+ V DGY +I DRSKD+IISGGENISS EV
Sbjct: 398 NIVMKGYLKNTKATEEAFK-GGWFHSGDLAVSQPDGYAKIMDRSKDIIISGGENISSLEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PAI A+VA+ D W + PCAF+ LK + + T + +IEFC+ L +
Sbjct: 457 EEVLYTHPAIMTAAVVAKPDTRWQEVPCAFIELKQD--AETTADEVIEFCKQHLARFKVP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K V+I E+PKT+TGK+QKF+LR+
Sbjct: 515 KDVVI-CEIPKTSTGKLQKFILRD 537
>gi|90416743|ref|ZP_01224673.1| acyl-CoA synthase [gamma proteobacterium HTCC2207]
gi|90331496|gb|EAS46732.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2207]
Length = 545
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 188/440 (42%), Positives = 266/440 (60%), Gaps = 17/440 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDY---QSSPLALAALSLFPSNTILPKPV------LIHDD 55
RLD ++ L H ESK+L D Q+ AL +++ P PV L+ DD
Sbjct: 102 RLDASVIAFQLDHGESKVLITDLAFSQTVKFALKLIAVKPLVIDYLDPVFPQQGQLLGDD 161
Query: 56 VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
A + G P+F W+ P+ EWD +ALNYTSGTT PKGVV+ HRG ++ ++I
Sbjct: 162 YEAMLAS--GDPDFDWLMPDDEWDAIALNYTSGTTGDPKGVVYHHRGASLLAQGNVITAS 219
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
IP V+LWTLPMFH NGW + W M+AV GT++CLR+V I++ + H VTH+CGA V
Sbjct: 220 IPKHAVYLWTLPMFHCNGWCFPWTMSAVTGTHVCLREVRADAIWAAMIEHKVTHLCGAPV 279
Query: 176 VLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
V++ + + L + V T+ A+PP VL GF V+H YGLTE G V
Sbjct: 280 VMSTILGVEKEHRQALSQVVDFFTAAAAPPEGVLAEMREAGFNVTHLYGLTEVYGPAVVN 339
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
W QW L +++AR+KARQGVR L +DVV P+T V DG++ GE++FR +M
Sbjct: 340 DWNQQWEALPASQQARVKARQGVRYHALEGLDVVDPQTMKPVPRDGETLGEVMFRGNVVM 399
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GYLK+Q+ + + WF++GD+GVVH D Y+++KDRSKD+IISGGENISS E+E VL
Sbjct: 400 KGYLKNQQATDEAFK-GGWFHSGDLGVVHPDNYIQLKDRSKDIIISGGENISSIEIEEVL 458
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
+ + A++ A+VA DK WG+ PCAF+ + + + E + +CR + + + +
Sbjct: 459 HKHAAVSFAAVVAMPDKKWGETPCAFIEVI--EGAQLSSEDLDRWCRQHMAGFKVPRHYV 516
Query: 414 IEDELPKTATGKIQKFVLRE 433
E L KT+TGK+QKF LR+
Sbjct: 517 FEPIL-KTSTGKVQKFALRQ 535
>gi|50086068|ref|YP_047578.1| acyl-CoA synthetase [Acinetobacter sp. ADP1]
gi|49532044|emb|CAG69756.1| putative AMP-dependent synthetase/ligase [Acinetobacter sp. ADP1]
Length = 547
Score = 346 bits (887), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 196/444 (44%), Positives = 280/444 (63%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS--SP 62
RLD K V+ +L H+E+K+L VD + S LA AALSL + V+ DD +P
Sbjct: 101 RLDAKTVAFMLEHAETKVLLVDQEFSELAKAALSLINQDIF----VIDVDDAEYEKCFTP 156
Query: 63 TVG-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
+G F+W+ P EWD ++LNYTSGTT +PKGVV+ HRG +I S++
Sbjct: 157 PIGAIEYEDWISEGDEYFEWILPNDEWDAISLNYTSGTTGNPKGVVYHHRGAYINAASNI 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I + + +LWTLP+FH NGW ++W +AA GGTNICLRKVD +++ +I+ H + + C
Sbjct: 217 IACGMTPRAKYLWTLPLFHCNGWCFAWTVAANGGTNICLRKVDPALVFKLIEQHKIDYFC 276
Query: 172 GALVVLNMLSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VL+ML ++P + + V+++ +GA+PPAA++ LG V+H YGLTET G
Sbjct: 277 GAPIVLSMLINAPKQHQIKFNHRVEVMVAGAAPPAAIIEGMRHLGVNVTHVYGLTETYGP 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
CA ++ W+ L+ E+A+L ARQGV M V+ P+T V DGQ+ GEI+FR
Sbjct: 337 SGLCAAQAGWSDLSIQEQAQLHARQGVPYPLQDSMRVLDPKTMQPVPADGQTLGEIMFRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + + D WF++GD+ V DGY +I DR+KDVIISGGENISS EV
Sbjct: 397 NIVMKGYLKNPKATEEAFADG-WFHSGDLAVCQPDGYAKITDRAKDVIISGGENISSLEV 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ A+VA+ D W + PCAF+ LK ++ T E +IE C+ L +
Sbjct: 456 EEVLYRHPAVLTAAVVAKPDPQWQEVPCAFIELKAGVNI--TTEELIEHCKKDLARFKVP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K ++I E+PKT+TGK+QKF+LR+
Sbjct: 514 KDIVI-TEIPKTSTGKLQKFILRD 536
>gi|114767644|ref|ZP_01446362.1| AMP-binding protein [Pelagibaca bermudensis HTCC2601]
gi|114540335|gb|EAU43428.1| AMP-binding protein [Roseovarius sp. HTCC2601]
Length = 541
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/440 (42%), Positives = 260/440 (59%), Gaps = 19/440 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS--- 61
RLD ++ +L H E+KL+ D Q P A+ L PK + + D +
Sbjct: 103 RLDVDTIAYILDHGEAKLVLCDPQFIPHLAEAIELMEQEP--PKVIEVADPHGGAKAFGD 160
Query: 62 -------PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P F W+ PE EW+ +ALNYTSGTT PKGVV+ HRG ++ + ++ W
Sbjct: 161 YLEYEDFLATGDPEFDWIMPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLNAMGQVLSW 220
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
R+ PV+L +P+FH NGW ++W M AVGGT +C R + IY I GVTH GA
Sbjct: 221 RMVLHPVYLTIVPLFHCNGWCHTWMMPAVGGTVVCCRDITAHNIYDAIADEGVTHFGGAP 280
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLNML ++P + D V++ T+GA P A L + E++GF V+ YGLTET G V
Sbjct: 281 IVLNMLVNAPEQEKRAFDHAVEVFTAGAPPAPATLAKIETMGFHVTQVYGLTETYGPDVE 340
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW++ W L ERA +KARQGV + + V+ + + + DG+++GEI+ R +
Sbjct: 341 CAWQAAWEPLQGAERAAMKARQGVAMPFMEHVTVMDEQMTI-IPADGETKGEIMHRGNGV 399
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK + + + +F++GDI V+H D Y++I DR+KD+IISGGENISS EVE+
Sbjct: 400 MKGYLKAPKATREAF-EGGYFHSGDIAVLHPDSYVQIADRAKDIIISGGENISSVEVENT 458
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L + A+ A+VA+ D+ WG+ PCAFV LK + E +I F R RL + K V
Sbjct: 459 LMGHEAVLLCAVVAKPDETWGEVPCAFVELK--PGHEAGEAELIAFARERLAGFKTPKKV 516
Query: 413 IIEDELPKTATGKIQKFVLR 432
+ E ELPKT+TGKIQKF LR
Sbjct: 517 VFE-ELPKTSTGKIQKFQLR 535
>gi|56477375|ref|YP_158964.1| acyl-CoA synthetase [Aromatoleum aromaticum EbN1]
gi|56313418|emb|CAI08063.1| putative AMP-binding enzyme [Aromatoleum aromaticum EbN1]
Length = 546
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 200/443 (45%), Positives = 265/443 (59%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH--DDVSATSSP 62
RLD + ++ +L H E+K+L D + + L AL PKP++I DD S
Sbjct: 103 RLDPEAIAFMLAHGEAKVLITDPEFASLVGPALERLDG----PKPLVIDALDDEYPGSDR 158
Query: 63 ----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F W P EWD +ALNYTSGTT +PKGVV+ HRG ++ S++I
Sbjct: 159 LGAIEYEEFLAAGDPEFAWSLPPDEWDAIALNYTSGTTGNPKGVVYHHRGAYLNAASNII 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P V+LWTLPMFH NGW + W MAA G N+CLRK+DV +IY +I+ H V+H CG
Sbjct: 219 SWGMPQHAVYLWTLPMFHCNGWCFPWTMAANAGINVCLRKIDVALIYELIRTHKVSHFCG 278
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V ML ++P + V L +GA+PPAA++ E +GF ++H YGLTET G
Sbjct: 279 APIVHGMLINAPEGMRDGITHKVSALIAGAAPPAAIIEGMERIGFDITHVYGLTETYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA W+ L RA RQGVR + V+ PET + V DG++ GEI+FR
Sbjct: 339 SVCAKHPSWDELPIDRRAERNGRQGVRYHMQEAIAVLDPETMVPVPADGETMGEIMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+++ S WF+TGD+ V+H DGY++IKDRSKDVIISGGENISS EVE
Sbjct: 399 LVMKGYLKNEKASDEAFA-GGWFHTGDLAVMHPDGYVKIKDRSKDVIISGGENISSLEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
LY +PA+ A+VA+ D+ WG+ P A++ +K T + II CR L Y K
Sbjct: 458 EALYRHPAVMTAAVVAKPDEKWGEVPAAYIEVK--DGTAVTVDDIIAHCREHLARYKVPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+ LPKT+TGKIQKFVLRE
Sbjct: 516 HIEF-CVLPKTSTGKIQKFVLRE 537
>gi|114771223|ref|ZP_01448643.1| acyl-CoA synthase [Rhodobacterales bacterium HTCC2255]
gi|114548148|gb|EAU51035.1| acyl-CoA synthase [Rhodobacterales bacterium HTCC2255]
Length = 533
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 183/438 (41%), Positives = 266/438 (60%), Gaps = 17/438 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E+K+ VD + +P A A+ + ++ + D+ + T+
Sbjct: 100 RLDSDTIAYILDHGEAKVFIVDGELAPQAAEAIK--GRDVLVVDIADLQDNPNPNRIGTI 157
Query: 65 GHPNF--------KWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ +F W P EWD +ALNYTSG+T PKGVV+ HRG +++++ + DW +
Sbjct: 158 DYSDFIKLGNESANWEMPTDEWDAIALNYTSGSTGRPKGVVYHHRGAYLMSMGVISDWGL 217
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P P +L+T+P+FH NGW + W MAA+ GT +C R + +IY+ I HG++H GA +V
Sbjct: 218 PRHPKYLYTVPLFHCNGWCHGWAMAALAGTIVCTRAITPAVIYNAISEHGISHFGGAPIV 277
Query: 177 LNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
L M+ ++ K + V ++T+GA PPAAVL E LGF V+ YGLTET G V
Sbjct: 278 LGMILNANDNDRKKFNYTVNVMTAGAPPPAAVLEGIEKLGFNVTQVYGLTETYGHTVMST 337
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W S W+ L +RA +K+RQG + + VV P G+ V DG++ GEI+ R ++M
Sbjct: 338 WNSDWDDLPQDQRAIMKSRQGAGMVHTDGLRVVDP-NGIDVPADGETFGEILIRGNTVMK 396
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ + +S D WF + D+ V+H++GY+E+KDR KD+IISGGENISS EVE +L+
Sbjct: 397 GYLKNPKATSEAFADG-WFRSEDLAVMHANGYVEVKDRLKDIIISGGENISSVEVEGILH 455
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+ A+ A+VA +D+ WG+ PCAF+ LK K TE II FCR L + K V+
Sbjct: 456 RHEAVALAAVVAMKDEKWGEVPCAFIELK--DGKSVTENEIISFCRDHLAGFKRPKKVVF 513
Query: 415 EDELPKTATGKIQKFVLR 432
LPKTATGKIQK+ LR
Sbjct: 514 -GVLPKTATGKIQKYELR 530
>gi|293604779|ref|ZP_06687178.1| acyl-CoA synthetase [Achromobacter piechaudii ATCC 43553]
gi|292816830|gb|EFF75912.1| acyl-CoA synthetase [Achromobacter piechaudii ATCC 43553]
Length = 571
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 198/447 (44%), Positives = 269/447 (60%), Gaps = 20/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD-DVSATSSPT 63
RLD V +L H E++ L VD + + +A A + FP I + +HD D + + P
Sbjct: 102 RLDAPSVLFMLGHGEARALIVDTEFADIAQRARAEFPHLRI----ISVHDLDSAPATLPG 157
Query: 64 V---------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
P++ W P EWD +ALNYTSGTT PKGVV+ +RG ++ VS++++W
Sbjct: 158 AVDYEAFLADASPHYAWQPPADEWDAIALNYTSGTTGDPKGVVYHYRGAYLNAVSNILEW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ GVTH CGA
Sbjct: 218 DMPKHAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFDPQTVFDLIRAEGVTHYCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+V + L+++P+ + V+ + +GA+P AV+ + +GF ++H YGLTE G
Sbjct: 278 IVQSALANAPADMRAGITHTVRTMVAGAAPAPAVIAKMREIGFELTHVYGLTEVYGPAAV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA + W+ L D RA+L ARQGVR A + V +PET V D Q+ GEI+FR
Sbjct: 338 CARQESWDALDDERRAQLTARQGVRYHLQAGVSVRNPETMQQVPADEQTVGEIMFRGNIC 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK++ + WF+TGD+GV+ DGY+ IKDRSKD+IISGGENISS EVE
Sbjct: 398 MKGYLKNERATDEAFA-GGWFHTGDLGVMTPDGYVRIKDRSKDIIISGGENISSIEVEDA 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ VA+VA D WG+ PCAFV LK S T E II C+ LP + ++V
Sbjct: 457 LYRHPAVAAVAVVAMPDPKWGETPCAFVELKAGASA--TAEEIIAHCKLLLPGFKVPRAV 514
Query: 413 IIEDELPKTATGKIQKFVLREIVNAVN 439
ELPKT+TGKIQKF LR V A
Sbjct: 515 RF-GELPKTSTGKIQKFELRAAVGATK 540
>gi|72384228|ref|YP_293582.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
gi|72123571|gb|AAZ65725.1| AMP-dependent synthetase and ligase [Ralstonia eutropha JMP134]
Length = 551
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 188/443 (42%), Positives = 266/443 (60%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD ++ +L H+++K+L D + + + AAL+L KP++I
Sbjct: 104 RLDAAAIAFMLRHADAKVLVTDTEYADVVQAALALLDD-----KPLVIDIIDPAVEGGRR 158
Query: 54 -DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ G P+++ +P EW +ALNYTSGTT +PKGVV+ HRG ++ +S+++
Sbjct: 159 LAEIEYEGFLAGGDPHWEGGEPVDEWQAIALNYTSGTTGNPKGVVYHHRGAYLAALSNML 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
DW +P VFLWTLP+FH NGW ++W +AA GT+ICLR+VD + I+ H VTH CG
Sbjct: 219 DWGMPRHAVFLWTLPLFHCNGWCFAWTLAANAGTSICLRRVDAAAVLDAIREHQVTHYCG 278
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V ML+ +P +D PV L GA PP V+ +G ++ YGLTE G
Sbjct: 279 APIVHAMLAHAPEAWKAGIDHPVHGLIGGAPPPMPVIEGLLRMGIRITQIYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C + +W+ L A K RQGVR M V+ PET + V D ++ GE++FR
Sbjct: 339 AVCVEQPEWDDLGIDALAERKGRQGVRYTAQEGMAVLDPETLVPVPWDAKTIGEVMFRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
M GYLK+ E ++ WF++GD+ VV DGY++I+DRSKDVIISGGENI+S EVE
Sbjct: 399 MTMKGYLKNPEATAEAFA-GGWFHSGDLAVVCPDGYVQIRDRSKDVIISGGENINSLEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ A+VAQ D+ WG+ PCAFV + + E +IE CRA L H+ A K
Sbjct: 458 EVLYRHPAVRVAAVVAQPDERWGETPCAFVEVV--DGARVGERELIEHCRAHLAHFKAPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V+I LP+T+TGKIQKF+LR+
Sbjct: 516 KVVI-GHLPRTSTGKIQKFLLRQ 537
>gi|406039526|ref|ZP_11046881.1| acyl-CoA synthetase [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 546
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 194/441 (43%), Positives = 278/441 (63%), Gaps = 17/441 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD K ++ +L H+ESK+L VD + + +A AL+L S I V + S S+P
Sbjct: 100 RLDAKTIAFMLEHAESKVLLVDPEFAHVAREALALI-SQQIYVIDVADLEYESELSNPIG 158
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
+ G NF+W P EWD ++LNYTSGTT +PKGVV+ HRG ++ S++I
Sbjct: 159 QIEYETWLSQGDANFEWSLPNDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAASNIIAC 218
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ + +LWTLP+FH NGW ++W +AA GGTN+CLRKVD +++ +I H V + CGA
Sbjct: 219 GMTPRASYLWTLPLFHCNGWCFAWTIAANGGTNVCLRKVDPELVFELIAKHKVDYFCGAP 278
Query: 175 VVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VL+ML ++P K D V+++ +GA+PPAA++ +G V+H YGLTET G
Sbjct: 279 IVLSMLINTPKDKQVHFDHRVEVMVAGAAPPAAIIEGMRHIGINVTHVYGLTETYGPSAL 338
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA ++ WN L+ E+A+L +RQGV M V+ PET V DGQ+ GEI+FR +
Sbjct: 339 CASQAGWNDLSIQEQAQLHSRQGVPYPLQDSMRVLDPETMQPVPADGQTLGEIMFRGNIV 398
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + + WF++GD+ V +DGY +I DR+KDVIISGGENISS EVE V
Sbjct: 399 MKGYLKNPKATEEAFA-GGWFHSGDLAVCQADGYAKITDRAKDVIISGGENISSLEVEEV 457
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ A+VA+ D W + PCAF+ LK +S E +I C+ +L + K +
Sbjct: 458 LYQHPAVMTAAVVAKPDPRWQEVPCAFIELKQGISVSTDE--LIAHCQQQLARFKVPKDI 515
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+I E+PKT+TGK+QKF+LR+
Sbjct: 516 VI-TEIPKTSTGKLQKFILRD 535
>gi|421474453|ref|ZP_15922488.1| long-chain-fatty-acid--CoA ligase [Burkholderia multivorans CF2]
gi|400232094|gb|EJO61736.1| long-chain-fatty-acid--CoA ligase [Burkholderia multivorans CF2]
Length = 550
Score = 345 bits (885), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 190/444 (42%), Positives = 267/444 (60%), Gaps = 13/444 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-------SNTILPKPVLIHDDVS 57
RLD V +L H E+K+L VD + + +A A P ++ + P +
Sbjct: 102 RLDAASVLFMLRHGEAKVLIVDTEYADIAQRAAQELPGLKLVSVADAMPADPARFAGAID 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFVASGDPDYAWHPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LW LPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH CGA +V
Sbjct: 222 KHAVYLWALPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERVTHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAELREGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ L+D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWDALSDDERARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+++ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNEKATDEAFH-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE I+ CR L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELRDGASA--TEEEIVAHCRQLLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNAVN 439
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRHAVGSAG 541
>gi|257092691|ref|YP_003166332.1| acyl-CoA synthetase [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257045215|gb|ACV34403.1| AMP-dependent synthetase and ligase [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 545
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 193/445 (43%), Positives = 272/445 (61%), Gaps = 26/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD-DVSATSSP- 62
RLD + ++ +L H E+K+L D + SP AL+ + +P+++ D D S S P
Sbjct: 102 RLDAETIAFMLDHGEAKVLITDREYSPTVKKALA------AVQRPIMVIDVDDSEYSGPG 155
Query: 63 ------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G P+F W P EWD ++LNYTSGTT +PKGVV+ HRG ++ ++S+
Sbjct: 156 ERLGSQEYEAFIAAGSPDFPWRGPNDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNSMSN 215
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+I W +P V+LWTLPMFH NGW + W MAA GTN+CLR+VD +I+ I+ HGVTH
Sbjct: 216 IISWGMPPHSVYLWTLPMFHCNGWCFVWTMAANAGTNVCLRRVDPKLIFDAIRAHGVTHY 275
Query: 171 CGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V +++++SP+ + + V L + A PPAAV+ ++G ++H YGLTET G
Sbjct: 276 CGAPIVHSLMANSPAELRAGITQKVCGLIAAAPPPAAVIEAMANIGVDLTHVYGLTETYG 335
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA W L ++ L RQGVR + V+ P T V D ++ GEI+FR
Sbjct: 336 PAAVCAKHGHWAELPLAQQVDLNGRQGVRYHAQEAITVLEPTTMEPVPWDHETMGEIMFR 395
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M GYLK+ + + W++TGD+ V+H DGY++IKDRSKDVIISGGENISS E
Sbjct: 396 GNLVMKGYLKNAKATEESFA-GGWYHTGDLAVMHPDGYVKIKDRSKDVIISGGENISSIE 454
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +PA+ A+VA D WG+ PCAF+ L+ +E+ +I+FCR + +
Sbjct: 455 VEDVLYKHPAVIAAAVVATPDATWGEVPCAFLELR--DGATASEQEVIDFCRQHMARFKV 512
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
K VI LPKT+TGKIQKF+LR+
Sbjct: 513 PKRVIF-GSLPKTSTGKIQKFILRD 536
>gi|311105566|ref|YP_003978419.1| AMP-binding protein [Achromobacter xylosoxidans A8]
gi|310760255|gb|ADP15704.1| AMP-binding enzyme family protein 8 [Achromobacter xylosoxidans A8]
Length = 548
Score = 345 bits (884), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/447 (44%), Positives = 272/447 (60%), Gaps = 20/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD-DVSATSSPT 63
RLD V +L H E++ L VD + + LA A + FP K + +HD D +A P
Sbjct: 99 RLDTPSVLFMLGHGEAQALIVDTEYAELAQRARAEFPQL----KLISVHDLDTAAAELPG 154
Query: 64 V--------GHPN-FKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P + W P EWD +ALNYTSGTT PKGVV+ +RG ++ +S++++W
Sbjct: 155 AVDYEAFLAGAPACYDWKPPADEWDAIALNYTSGTTGDPKGVVYHYRGAYLNAISNILEW 214
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P PV+LWTLP+FH NGW ++W +AA G N+CLRK D ++ +I++ GVTH CGA
Sbjct: 215 DMPKHPVYLWTLPLFHCNGWCFAWTIAARAGVNVCLRKFDPQTVFDLIRNEGVTHYCGAP 274
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+V + L+++P+ +D V+ + +GA+P AV+ + +GF ++H YGLTE G
Sbjct: 275 IVQSALANAPAEMRAGIDHTVRTMVAGAAPAPAVIAKMRDIGFELTHVYGLTEVYGPAAV 334
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA + W+ L + ERA ARQGVR A + V +P+T V D Q+ GE++FR
Sbjct: 335 CARQEAWDALDEEERALRNARQGVRYHLQAGVSVRNPDTMEEVPADEQTVGEVMFRGNIC 394
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK++ + WF TGD+GV+ +DGY+ IKDRSKD+IISGGENISS EVE
Sbjct: 395 MKGYLKNERATDQAFA-GGWFRTGDLGVMTADGYVRIKDRSKDIIISGGENISSIEVEDA 453
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ VA+VA D WG+ PCAFV LK S T E II C+ LP + ++V
Sbjct: 454 LYRHPAVAAVAVVAMPDPKWGETPCAFVELKPGCSA--TAEEIIAHCKLLLPGFKVPRAV 511
Query: 413 IIEDELPKTATGKIQKFVLREIVNAVN 439
ELPKT+TGKIQKF LR V A
Sbjct: 512 RF-GELPKTSTGKIQKFELRAAVGATQ 537
>gi|431802716|ref|YP_007229619.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
gi|430793481|gb|AGA73676.1| acyl-CoA synthetase [Pseudomonas putida HB3267]
Length = 564
Score = 344 bits (883), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 183/439 (41%), Positives = 266/439 (60%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL+ + ++ +L H +K+L D + +A AL++ + +L V I DD + +
Sbjct: 117 RLEARSIAFILRHCAAKVLICDREFGAVASQALAMLDAPPLL---VGIDDDQAERADLAH 173
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P P++EW +A+NYTSGTT PKGVV HRG ++ + + +
Sbjct: 174 DLDYEAFLAQGDPARPLSAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIF 233
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + V+LWTLPMFH NGWS++W + GGT++CLRKV I + I H VTH+ A
Sbjct: 234 QLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPDAINAAIAEHAVTHLSAAP 293
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
VV++ML + PV ++T GA+PP+AV+ E+ GF ++H+YG+TE+ G C
Sbjct: 294 VVMSMLIHAEHASAPPVPVSVITGGAAPPSAVIAAMEARGFNITHAYGMTESYGPSTLCL 353
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ + L RA+ +RQGV L + V+ +TG V DG + GE+V R ++M
Sbjct: 354 WQPGVDELPLEARAQFMSRQGVAHPMLEEATVLDTDTGRPVPADGLTLGELVVRGNTVMK 413
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYL + E + + N W +TGD+ V+H DGY+EIKDR+KD+IISGGENISS E+E VLY
Sbjct: 414 GYLHNPEATRAALA-NGWLHTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLY 472
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+ + E A+VA+ D WG+ P AFV+L+ + TE +I +CR RL H+ A + V +
Sbjct: 473 QHSEVVEAAVVARPDSRWGETPHAFVTLRADALATVTEADLIRWCRERLAHFKAPRHVSL 532
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKTATGKIQKFVLRE
Sbjct: 533 -TELPKTATGKIQKFVLRE 550
>gi|385206493|ref|ZP_10033363.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
gi|385186384|gb|EIF35658.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Burkholderia
sp. Ch1-1]
Length = 543
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 195/437 (44%), Positives = 266/437 (60%), Gaps = 13/437 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL----PKPVLIHDDVSATS 60
RLD + +L H E+K L VD + A A FP ++ P + AT
Sbjct: 102 RLDISSLLFMLRHGEAKALIVDTEYGEFAHRASLEFPDLRVISVADAMPAHADQFIRATD 161
Query: 61 SPTV---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P F W P EWD +ALNYTSGTT PKGVV+ HRG ++ VS++++W +P
Sbjct: 162 YEAFLQSGDPEFAWTMPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNAVSNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLP+FH NGW + W +AA G N+CLRK D ++ +I++ G+TH CGA +V
Sbjct: 222 KHAVYLWTLPLFHCNGWCFPWTVAARAGVNVCLRKFDAKTVFDLIRNEGITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ L+++P+ ++ V + +GA+P AV+ + + +GF ++H YGLTET G CA
Sbjct: 282 SALANAPAEWRDGINHRVSTMVAGAAPAPAVIAKMKEIGFDLTHVYGLTETYGPAAVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ W TL D+ RA L ARQGVR A + V+ P+T V +DG++ GEI+FR M G
Sbjct: 342 QEAWETLDDSARAELNARQGVRYHLQAAVTVLDPQTLALVPNDGETIGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK++ + + WF+TGD+GV DGY+ I+DRSKD+IISGGENISS E+E LY
Sbjct: 402 YLKNERATEAAF-EGGWFHTGDLGVRMPDGYIRIRDRSKDIIISGGENISSIELEDTLYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV LK E ++ EE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVAMADPKWGEVPCAFVELK-EGAQVSAEE-IIAHCRLFLAGYKLPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLR 432
ELPKT+TGKIQKF LR
Sbjct: 518 GELPKTSTGKIQKFELR 534
>gi|91777355|ref|YP_552563.1| acyl-CoA synthetase [Burkholderia xenovorans LB400]
gi|91690015|gb|ABE33213.1| Putative AMP-dependent synthetase and ligase [Burkholderia
xenovorans LB400]
Length = 543
Score = 344 bits (882), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 195/437 (44%), Positives = 266/437 (60%), Gaps = 13/437 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL----PKPVLIHDDVSATS 60
RLD + +L H E+K L VD + A A FP ++ P + AT
Sbjct: 102 RLDISSLLFMLRHGEAKALIVDTEYGEFAHRASLEFPDLRVISVADAMPANADQFIRATD 161
Query: 61 SPTV---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P F W P EWD +ALNYTSGTT PKGVV+ HRG ++ VS++++W +P
Sbjct: 162 YEAFLQSGDPEFAWTMPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNAVSNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLP+FH NGW + W +AA G N+CLRK D ++ +I++ G+TH CGA +V
Sbjct: 222 KHAVYLWTLPLFHCNGWCFPWTVAARAGVNVCLRKFDAKTVFDLIRNEGITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ L+++P+ ++ V + +GA+P AV+ + + +GF ++H YGLTET G CA
Sbjct: 282 SALANAPAEWRDGINHRVSTMVAGAAPAPAVIAKMKEIGFDLTHVYGLTETYGPAAVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ W TL D+ RA L ARQGVR A + V+ P+T V +DG++ GEI+FR M G
Sbjct: 342 QEAWETLDDSARAELNARQGVRYHLQAAVTVLDPQTLALVPNDGETIGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK++ + + WF+TGD+GV DGY+ I+DRSKD+IISGGENISS E+E LY
Sbjct: 402 YLKNERATEAAF-EGGWFHTGDLGVRMPDGYIRIRDRSKDIIISGGENISSIELEDTLYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV LK E ++ EE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVAMADPKWGEVPCAFVELK-EGAQVSAEE-IIAHCRLFLAGYKLPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLR 432
ELPKT+TGKIQKF LR
Sbjct: 518 GELPKTSTGKIQKFELR 534
>gi|121606172|ref|YP_983501.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
gi|120595141|gb|ABM38580.1| AMP-dependent synthetase and ligase [Polaromonas naphthalenivorans
CJ2]
Length = 546
Score = 344 bits (882), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 194/452 (42%), Positives = 267/452 (59%), Gaps = 40/452 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--------- 55
RLD + ++ +L H E+K+L D + SP+ AL L P+P++I D
Sbjct: 103 RLDAEAIAFMLDHGEAKVLLTDREFSPIIERALPLMKQ----PRPLVIDVDDPLHEGGAL 158
Query: 56 ---VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ + G ++W P EW+ +ALNYTSGTT +PKGVV HRG ++ VS+++
Sbjct: 159 LGELDYEAFLQTGDEAYEWALPSDEWNAIALNYTSGTTGNPKGVVTHHRGAYLNAVSNVV 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P V+LWTLPMFH NGW + W +A G ++CLRKVD +I+S+I+ H VTH+CG
Sbjct: 219 TWEMPRHSVYLWTLPMFHCNGWCFPWTLALQAGVSVCLRKVDPALIFSLIREHRVTHLCG 278
Query: 173 ALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLR-----------TESLGFVVSHSY 221
A +V +L ++P ++L +G S P A L+ E +G ++H Y
Sbjct: 279 APIVYGLLINAP---------QVLRAGISHPIAGLIAGAAPPAAIIEGCERIGIDITHVY 329
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQS 281
GLTE G CA ++ W+ L ERA L ARQGV + V+ PET V DG++
Sbjct: 330 GLTEVYGPAAVCAKQAGWDKLPIGERAALNARQGVAYPMQQAIAVLDPETMRPVPADGET 389
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GEI FR +M GYLK+ + + WF+TGD+ V+H DGY++IKDRSKDVIISGG
Sbjct: 390 MGEIFFRGNLVMKGYLKNPQATEEAFA-GGWFHTGDLAVLHPDGYVKIKDRSKDVIISGG 448
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRA 401
ENISS EVE VLY +PA+ A+VA+ D WG+ PCA++ L TE IIE CR+
Sbjct: 449 ENISSLEVEEVLYRHPAVLVAAVVAKPDDKWGEVPCAYLELC--DGATVTEAEIIEHCRS 506
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+L + K V+ LPKT+TGKIQKFVLRE
Sbjct: 507 QLARFKVPKQVLF-GTLPKTSTGKIQKFVLRE 537
>gi|302342241|ref|YP_003806770.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
gi|301638854|gb|ADK84176.1| AMP-dependent synthetase and ligase [Desulfarculus baarsii DSM
2075]
Length = 536
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 268/437 (61%), Gaps = 13/437 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL + + +++HS++K LFVD + +P L L L + DD S P+
Sbjct: 94 RLSPQEIGYIVNHSDAKALFVDTELAPQILPVLDDL-RQLRLRVNIQDIDDASPLKGPSY 152
Query: 64 -----VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
G V+ + E+ +NYTSGTT PKGV++ HRG + + +++ ++
Sbjct: 153 EEFLATGSDEPLAVEVDDEYQIATINYTSGTTGKPKGVMYHHRGACLNALGEMLEAKLNT 212
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
V+LWTLPMFH NGW ++WG+ A G T++CLRKV I+ +I+H GVT++C A VL
Sbjct: 213 NSVYLWTLPMFHCNGWCFTWGVTAAGATHVCLRKVVPEEIFRLIEHEGVTNLCAAPTVLV 272
Query: 179 MLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
+++ P + + ++I+T+GA P AV+ E+LG V+ +YGLTE G CAW+
Sbjct: 273 SMANYPGAANARMKAHLEIMTAGAPPAPAVIKSMENLGANVTQTYGLTEVFGPHSICAWQ 332
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
++W+ L ERA +KARQGV MDVV + V HDG++ GEIV R ++MLGY
Sbjct: 333 TKWDNLPLDERAAIKARQGVPYTVALHMDVVDQLSMAPVPHDGKTIGEIVMRGNNVMLGY 392
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
KD E ++ R WF++GD+ VVH DGY++I DRSKD+IISGGENIS+ EVESVLY +
Sbjct: 393 YKDPEATAEAFR-GGWFHSGDLAVVHPDGYVQIMDRSKDIIISGGENISTVEVESVLYGH 451
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
P + EVA++A D WG+ P A+V+LK KP +++I+FCR L + A K V
Sbjct: 452 PDVLEVAVIAVPDDKWGEAPKAYVTLKE--GAKPDAQSLIDFCRQHLAKFKAPKHVEF-G 508
Query: 417 ELPKTATGKIQKFVLRE 433
LPKTATGKIQKF LRE
Sbjct: 509 PLPKTATGKIQKFKLRE 525
>gi|84516538|ref|ZP_01003897.1| probable AMP-binding protein [Loktanella vestfoldensis SKA53]
gi|84509574|gb|EAQ06032.1| probable AMP-binding protein [Loktanella vestfoldensis SKA53]
Length = 552
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 184/449 (40%), Positives = 276/449 (61%), Gaps = 26/449 (5%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD----- 55
+V RLD ++ L H+ SK++ VD + PL AL+L + P+ V+ +DD
Sbjct: 99 SVNTRLDASVIAFQLDHAMSKVVIVDREFMPLIEKALAL---ANVTPR-VIQYDDPEFPG 154
Query: 56 -VSATSSP------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
+AT + + G P+F W+ P EWD +A+NYTSGTT PKGVV HRG +++
Sbjct: 155 PATATEAQDYNAFLSTGDPDFDWLMPLDEWDAIAINYTSGTTGDPKGVVSHHRGAYLLAQ 214
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
+ + + V+LWTLPMFH NGW + W ++A+ GT++CLR+V I++ + GVT
Sbjct: 215 GNALTTSMAKHAVYLWTLPMFHCNGWCFPWTLSAIVGTHVCLRQVRPEPIWAALADEGVT 274
Query: 169 HICGALVVLNMLSSS--PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H+CGA +V++++ S+ + D V+ T+ A PP +L ++ GF V+H YGLTET
Sbjct: 275 HLCGAPIVMSLIISAHQAEKRTFDHQVQFFTAAAPPPEKLLADMKTAGFDVTHLYGLTET 334
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G V W +W+ L E+A LK+RQGVR + L +DV+ PET + V DG++ GE++
Sbjct: 335 YGPAVVNDWHHEWSDLPLAEQATLKSRQGVRYLPLEGLDVLDPETMLPVPRDGETMGEVM 394
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
FR +M GY ++ + + WF++GD+GV + DGY+++KDRSKD+IISGGENISS
Sbjct: 395 FRGNVVMKGYFRNPKATQQAFA-GGWFHSGDLGVRYPDGYIQLKDRSKDIIISGGENISS 453
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA--IIEFCRARLP 404
EVE LY +PA+ A+VA + WG+ PCAFV ELS +A + +C+ L
Sbjct: 454 IEVEEALYRHPAVKTAAVVAMPHEKWGETPCAFV----ELSTGADVDAATLRAWCKDWLA 509
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y S+++ E+P+T+TGKIQK++LRE
Sbjct: 510 PYKV-PSMVVFMEIPRTSTGKIQKYMLRE 537
>gi|409402893|ref|ZP_11252351.1| AMP-dependent synthetase and ligase [Acidocella sp. MX-AZ02]
gi|409128608|gb|EKM98503.1| AMP-dependent synthetase and ligase [Acidocella sp. MX-AZ02]
Length = 540
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 201/439 (45%), Positives = 277/439 (63%), Gaps = 21/439 (4%)
Query: 6 LDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTVG 65
LD ++ +L H+E+KLL VD + +P A AAL+L + IL V I D+ +A T+G
Sbjct: 103 LDAPAIAFILEHAEAKLLLVDREWAPKAQAALALLANPPIL---VEIADE-AAPPGLTLG 158
Query: 66 HPNFK----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
P ++ W P EW+ +A+NYTSGTT +PKGVV+ HRG ++ +S
Sbjct: 159 APEYEDWIAPHPPAPWRLPADEWEAIAVNYTSGTTGNPKGVVYHHRGAYLGALSVAFMVN 218
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+ + +LWTLPMFH +GW+Y+W + A+GGT++CLRK+D I+ I+ H VTH+CGA +
Sbjct: 219 LTQESAYLWTLPMFHCSGWTYTWAVTALGGTHVCLRKIDPAAIFEKIERHYVTHMCGAPI 278
Query: 176 VLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
VL ML ++P + L R V + +GA+PP+A++ TE LGF V H YGLTE G C
Sbjct: 279 VLGMLINAPEGVKRVLARQVIVAIAGAAPPSAIIEGTERLGFSVRHVYGLTEVYGPSALC 338
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
+ W L T RARL ARQGV I D+ V+ P+ G +V DG++ GE+ F+ +M
Sbjct: 339 EPQPDWQELDLTARARLTARQGVPGITQEDLSVLDPQ-GATVPADGRTIGELAFKGNVVM 397
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GYLK+ + + R N WF TGD+GV+H DGY+EIKDR+KD+IISGGENISS EVE VL
Sbjct: 398 KGYLKNPKATREAFR-NGWFLTGDLGVLHPDGYVEIKDRAKDIIISGGENISSLEVEEVL 456
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +PA+ E A+VA D+ WG+ P A ++LK + E + FCRA L + K
Sbjct: 457 YRHPAVREAAVVAVPDEKWGEVPLAVIALK--EGAQVNEAELTSFCRAHLAGFKIPKLYR 514
Query: 414 IEDELPKTATGKIQKFVLR 432
DELPKT+TGKIQK +LR
Sbjct: 515 F-DELPKTSTGKIQKHILR 532
>gi|170703156|ref|ZP_02893968.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
gi|170131933|gb|EDT00449.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria
IOP40-10]
Length = 550
Score = 343 bits (880), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 266/442 (60%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V +L H E+K+L VD + + LA A P I+ + D + + T
Sbjct: 102 RLDISSVLFMLRHGEAKVLIVDTEYADLAHRAAREVPGLKIVSVADAMPADPARFAGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P++ W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFVAGGDPDYAWTPPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRSERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAEFRAGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ L D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWDALPDDERARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPKATDEAFH-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE II C+ L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELRDGASA--TEEEIIAHCKQLLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRNAVGS 539
>gi|99081406|ref|YP_613560.1| AMP-dependent synthetase/ligase [Ruegeria sp. TM1040]
gi|99037686|gb|ABF64298.1| AMP-dependent synthetase and ligase [Ruegeria sp. TM1040]
Length = 543
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 190/443 (42%), Positives = 262/443 (59%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF----PSNTILPKPVLIHDDVSATS 60
RLD V+ + H ++K++ VD + PLA AA P+ +P H +A+
Sbjct: 103 RLDVDTVAYIFDHGQAKVVLVDSEFLPLAEAAKERLQGAGPTLIEVPDTEAGH---AASG 159
Query: 61 SPTV-------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
T G +F W+ PE EW+ +ALNYTSGTT PKGVV+ HRG +++T+ +++
Sbjct: 160 RYTTYEDLIAHGATDFDWIMPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVS 219
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
WR+ +PV+L +P+FH NGW+++W M +GGT +C R IY+ I GVTH GA
Sbjct: 220 WRLQLRPVYLTIVPLFHCNGWNHTWMMPVLGGTVVCCRNTTAEAIYNAIADEGVTHFGGA 279
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLNM+ ++ T + D V++ T+GA P A L + E LGF V+ YGLTET G V
Sbjct: 280 PIVLNMIVNAKDTERRAFDHTVEVFTAGAPPAPATLEKIERLGFHVTQVYGLTETYGHVT 339
Query: 232 SCAWKSQ-WNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C WK W+ L RA +KARQGV + D V V +G QGEIV R
Sbjct: 340 ECLWKGDSWDELDQQGRAAIKARQGV-AFPMMDHITVMDADMQQVPMNGSDQGEIVMRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
S+M GYLK+ E + +F++GDI + H DGY++I DR+KD+IISGGENISS EVE
Sbjct: 399 SVMKGYLKNPEATEEAFA-GGYFHSGDIAIQHPDGYIQIADRAKDIIISGGENISSVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VL +P +N A+VA+ D+ WG+ PCAFV LK E ++I F R L + K
Sbjct: 458 GVLMGHPDVNLAAVVAKPDEKWGEVPCAFVELK--EGADVDEASLIAFARQTLAGFKTPK 515
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+V+ ELPKT+TGKIQKF LR+
Sbjct: 516 AVVF-CELPKTSTGKIQKFELRK 537
>gi|260427951|ref|ZP_05781930.1| AMP-dependent synthetase and ligase [Citreicella sp. SE45]
gi|260422443|gb|EEX15694.1| AMP-dependent synthetase and ligase [Citreicella sp. SE45]
Length = 541
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/443 (42%), Positives = 264/443 (59%), Gaps = 25/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF----PSNTILPKP---------VL 51
RLD ++ +L H E+K++ D Q P A+ P+ + P L
Sbjct: 103 RLDIDTIAYILDHGEAKVVLCDPQFIPHLAEAMERMEQDPPTVIEVADPHGGAKAFGDYL 162
Query: 52 IHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
++D AT G P+F W+ PE EW+ +ALNYTSGTT PKGVV+ HRG ++ + +
Sbjct: 163 EYEDFLAT-----GDPHFTWIMPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLNAMGQV 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ WR+ PV+L +P+FH NGW ++W M AVGGT +C R + IY I GVTH
Sbjct: 218 LSWRMVLHPVYLTIVPLFHCNGWCHTWMMPAVGGTVVCCRDIAAHNIYDAIADEGVTHFG 277
Query: 172 GALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +VLNM+ + + + V++ T+GA P A L + E++GF V+ YGLTET G
Sbjct: 278 GAPIVLNMIVNAREEEKRSFEHVVEVFTAGAPPAPATLAKIETMGFNVTQVYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V CAW+ W+ + ERA +KARQGV + + V+ + + ++ DG+++GEI+ R
Sbjct: 338 DVECAWQGTWDHIKGDERAAMKARQGVAMPFMEHVTVMDEQMNI-IEADGETKGEIMHRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK + + D +F++GDI V+H D YL+I DR+KD+IISGGENISS EV
Sbjct: 397 NGVMKGYLKAPKATREAF-DGGYFHSGDIAVLHPDSYLQIADRAKDIIISGGENISSVEV 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E+ L + A+ A+VA+ DK WG+ PCAFV LK TE +I F R RL +
Sbjct: 456 ENTLMAHEAVLLCAVVAKPDKKWGEVPCAFVELK--PGHAATEAELIAFARDRLAGFKTP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
K+V+ E ELPKT+TGKIQKF LR
Sbjct: 514 KAVVFE-ELPKTSTGKIQKFQLR 535
>gi|402569069|ref|YP_006618413.1| acyl-CoA synthetase [Burkholderia cepacia GG4]
gi|402250266|gb|AFQ50719.1| acyl-CoA synthetase [Burkholderia cepacia GG4]
Length = 550
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 193/442 (43%), Positives = 267/442 (60%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V +L H E+K+L VD + + LA A P I+ + D + + T
Sbjct: 102 RLDISSVLFMLRHGEAKVLIVDTEYAELAHRAALEVPGLKIVSVADAMPADPARFAGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P++ W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFVAGGDPDYAWTLPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAEFREGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ L D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWDELPDDERARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPKATDEAFH-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE I+ C+ L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELREGASA--TEEEIVAHCKQLLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRNAVGS 539
>gi|159043385|ref|YP_001532179.1| AMP-dependent synthetase and ligase [Dinoroseobacter shibae DFL 12]
gi|157911145|gb|ABV92578.1| AMP-dependent synthetase and ligase [Dinoroseobacter shibae DFL 12]
Length = 541
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 197/449 (43%), Positives = 266/449 (59%), Gaps = 25/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH--DDVSATSSP 62
RLD V+ +L H +K + VD Q PLA A P P+LI DD + +
Sbjct: 103 RLDVDTVAYILSHGGAKAVLVDSQFLPLAAEACERLDG----PAPLLIEVADDAAGVHAL 158
Query: 63 ----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P+F W+ P EW+ +ALNYTSGTT PKGVV+ HRG +++T+ ++I
Sbjct: 159 GGYTEYEDFLAGGDPDFPWIMPRDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ P +L +P+FH NGW++SW M +GGT +C R V IY+ I +GVTH G
Sbjct: 219 SWRMVLYPRWLAIVPLFHCNGWNHSWMMPMLGGTVVCCRDVSAQAIYTAIAENGVTHFGG 278
Query: 173 ALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNM+ ++P + +P V++ T+GA P AA L E LGF V+ YGLTET G V
Sbjct: 279 APIVLNMIVNAPDAARRPFSHTVEVFTAGAPPAAATLAAIEELGFNVTQVYGLTETYGHV 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C W W+TL ERA +KARQGV + + V+ PE V DG + GE++ R
Sbjct: 339 TECVWNPDWDTLPQAERAAIKARQGVALPQMEHITVMDPEM-RQVPMDGATTGEVMMRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
S+M GY ++ + ++ +F++GDI + H DGY++I DR+KD+IISGGENISS EVE
Sbjct: 398 SVMKGYYRNPDATAEAFA-GGYFHSGDIALQHPDGYIQIADRAKDIIISGGENISSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAH 409
L +PA+ A+VA+ D WG+ PCAFV LK K EEA II F R RL +
Sbjct: 457 GALMHHPAVLLCAVVAKPDPTWGEVPCAFVELK---DGKTAEEAEIIAFARERLAGFKTP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K V+ ELPKT+TGKIQKF LR A+
Sbjct: 514 KKVVFT-ELPKTSTGKIQKFELRNRAKAL 541
>gi|163745771|ref|ZP_02153130.1| AMP-dependent synthetase and ligase [Oceanibulbus indolifex HEL-45]
gi|161380516|gb|EDQ04926.1| AMP-dependent synthetase and ligase [Oceanibulbus indolifex HEL-45]
Length = 541
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 194/448 (43%), Positives = 270/448 (60%), Gaps = 23/448 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD VS +L H + +L VD + LA AA + P P ++ D A PT
Sbjct: 103 RLDVGTVSYILDHGGAVVLLVDSEFIALAEAACAAMDG----PPPAIVEVPDTDAGHPPT 158
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F W+ P EW+ +ALNYTSGTT PKGVV+ HRG +++T+ +++
Sbjct: 159 GRHPLYEDLLSEGDPAFDWILPSDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVV 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W++ +PVF+ +P+FH NGW+++W M +GGT +C R + IY I H VTH G
Sbjct: 219 SWQMVLRPVFMQIVPLFHCNGWNHTWMMPLLGGTLVCCRDITAAAIYDAIADHDVTHFGG 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML ++ + D V++ T+GA P A L + E LGF V+ YGLTET G V
Sbjct: 279 APIVLNMLVNAAQEDRRAFDHTVEVFTAGAPPAPATLSKIEKLGFNVTQVYGLTETFGHV 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C W+S W+ L++ ERA +KARQG+ + ++ V E + + DG++QGEI+ R
Sbjct: 339 TECLWQSDWDALSENERAAIKARQGIAMPMMEEITVTDAEMSQTPR-DGKAQGEIMIRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ E ++ +F++GDI V H DGY++I DR+KD+IISGGENISS EVE
Sbjct: 398 AVMKGYLKNPEATAEAFA-GGYFHSGDIAVQHPDGYIQISDRAKDIIISGGENISSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VL + A+N A+VAQ WG+ PCAFV +K + TEEA+I F R L + K
Sbjct: 457 GVLMGHDAVNLAAVVAQPHDKWGEVPCAFVEIK--PGSEATEEALIAFTRESLAGFKTPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
VI ELPKT+TGKIQKF LR+ A+
Sbjct: 515 RVIF-GELPKTSTGKIQKFELRKRAAAL 541
>gi|398831198|ref|ZP_10589377.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Phyllobacterium sp. YR531]
gi|398212766|gb|EJM99368.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Phyllobacterium sp. YR531]
Length = 548
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 187/449 (41%), Positives = 260/449 (57%), Gaps = 29/449 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-------DDVS 57
RLD ++ L H+E+K+ VD + S + AL L KP++I DD
Sbjct: 102 RLDAAIIAFQLDHAETKIAIVDTEFSKVFSEALKLAKV-----KPLIIDFVDAEYPDDAP 156
Query: 58 ATSSPTVGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
P +G P + W P+ EWD + LNYTSGTT +PKGVV+ HRG ++
Sbjct: 157 HEQGPRIGELDYEAFLQSGDPEYAWSMPDDEWDAITLNYTSGTTGNPKGVVYHHRGAALM 216
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+++ + PV+LWTLPMFH NGW + W +A GT++CLR V IY I HG
Sbjct: 217 GYGNIVASGLGRYPVYLWTLPMFHCNGWCFPWTLALQFGTHVCLRWVRAKPIYDAIADHG 276
Query: 167 VTHICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH+CGA +V++ L + + + V T+ ASPP ++L GF V+H YGLT
Sbjct: 277 VTHLCGAPIVMSTLINAGEREKRTFPQTVSFNTAAASPPESILAGMAEAGFEVTHLYGLT 336
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G V W+ +WN L + +A KARQGVR L + V+ PET V DG++ GE
Sbjct: 337 ETYGPAVVNEWQDEWNELESSSKAARKARQGVRYTPLEGLAVLDPETMNPVPPDGETIGE 396
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++FR +M GYLK+++ S WF++GD+GV++ DGY+++KDRSKD+IISGGENI
Sbjct: 397 VMFRGNIVMKGYLKNRQASDEAFA-GGWFHSGDLGVMYPDGYIQLKDRSKDIIISGGENI 455
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE LY P ++ A+VA D WG+ P AFV +K T + +I CR L
Sbjct: 456 SSIEVEDALYKFPGVSACAVVACLDDKWGETPMAFVEMKQGYVA--TADELIAHCRGLLA 513
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + V+ E E+PKT+TGKIQKF LR+
Sbjct: 514 GFKCPRHVVFE-EIPKTSTGKIQKFELRK 541
>gi|126731106|ref|ZP_01746914.1| AMP-dependent synthetase and ligase [Sagittula stellata E-37]
gi|126708408|gb|EBA07466.1| AMP-dependent synthetase and ligase [Sagittula stellata E-37]
Length = 541
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/440 (43%), Positives = 262/440 (59%), Gaps = 19/440 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD +S +L H E+K++ D Q P+ A S P+ V + DD + +
Sbjct: 103 RLDPDTISYILDHGEAKVVLCDPQFLPVLAEAFDRMESEP--PQVVEVPDDHAGVHRHSD 160
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P+F W+ PE EW+ +ALNYTSGTT PKGVV+ HRG ++ + ++ W
Sbjct: 161 YLQYEDLLANGDPDFAWIMPEDEWESIALNYTSGTTGRPKGVVYHHRGAYLNAMGQVLSW 220
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
RI PV+L +P+FH NGW ++W M AVGGT +C R V I++ I GVTH GA
Sbjct: 221 RIVLHPVYLTIVPLFHCNGWCHTWMMPAVGGTIVCCRDVRADSIFNAIADEGVTHFGGAP 280
Query: 175 VVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLN L ++P + D V++ T+GA P A L E +GF V+ YGLTET G
Sbjct: 281 IVLNTLINAPEDQKRAFDHVVEVFTAGAPPAPATLAAIEPMGFNVTQVYGLTETYGPGTE 340
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C W+S+W+ + RA K+RQGV L MDV+ E G + DG+++GEIVFR +
Sbjct: 341 CTWQSRWDHMEGEARAAQKSRQGVAMPFLEPMDVLD-EAGAPIARDGKTRGEIVFRGNGV 399
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + +D F++GDI V+H D YL+I DR+KD+IISGGENISS EVE V
Sbjct: 400 MKGYLKNPRATKEAFKDG-LFHSGDIAVMHPDNYLQIADRAKDIIISGGENISSVEVEGV 458
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L +PA+ A+VA+ D WG+ PCAFV LK + +E +I F R RL + K V
Sbjct: 459 LMAHPAVLLCAVVAKPDDKWGEVPCAFVELK--DGRDASEADLIAFARERLAGFKTPKKV 516
Query: 413 IIEDELPKTATGKIQKFVLR 432
+ + ELPKT+TGKIQKF LR
Sbjct: 517 VFQ-ELPKTSTGKIQKFELR 535
>gi|172063220|ref|YP_001810871.1| acyl-CoA synthetase [Burkholderia ambifaria MC40-6]
gi|171995737|gb|ACB66655.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MC40-6]
Length = 550
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 193/442 (43%), Positives = 266/442 (60%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V +L H E+K+L VD + + LA A P I+ + D + + T
Sbjct: 102 RLDISSVLFMLRHGEAKVLIVDTEYADLAHRAAREVPGLKIVSVADAMPADPARFAGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P++ W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFVAGGDPDYAWTPPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 222 KHSVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRSERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAEFRAGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ L D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWDALPDDERARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPKATDEAFH-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE I+ C+ L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELREGASA--TEEEIVAHCKQLLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRNEVGS 539
>gi|338991912|ref|ZP_08634705.1| AMP-dependent synthetase and ligase [Acidiphilium sp. PM]
gi|338205163|gb|EGO93506.1| AMP-dependent synthetase and ligase [Acidiphilium sp. PM]
Length = 393
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/369 (48%), Positives = 242/369 (65%), Gaps = 7/369 (1%)
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
G +F W P+ EW +ALNYTSGTT PKGVV+ HRG ++ + + I W + PV+LW
Sbjct: 29 GTADFDWCFPDDEWSAIALNYTSGTTGKPKGVVYHHRGAYLNGLGNAITWNMRQHPVYLW 88
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSP 184
TLPMFH NGW + W + A+ GT++CLR++D I + ++ HGVTH+CGA V++NM+ ++P
Sbjct: 89 TLPMFHCNGWCFPWTITALAGTHVCLRRIDAASIAAAVERHGVTHLCGAPVIMNMMINAP 148
Query: 185 STKP---LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNT 241
+ R V ++T+GA PPAAV+ E LG ++H YGLTET G V CAW+ WN
Sbjct: 149 EPQRAVYAGRGVAMMTAGAPPPAAVIEAMEGLGVDLTHVYGLTETYGPVTYCAWQEDWNG 208
Query: 242 LADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQE 301
ERA L+ARQGV V P T V DG + GE+ R +M+GYLKD
Sbjct: 209 RPAAERAALRARQGVTYAVEEGAMVADPATRAPVPADGTTMGEVFLRGNIVMMGYLKDAA 268
Query: 302 GSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
+ WF TGD+GV+H DGY+E+KDRSKD+IISGGENIS+ E+E+VLY +PA+ E
Sbjct: 269 ATEKSFA-GGWFATGDLGVMHPDGYIELKDRSKDIIISGGENISTIEIETVLYRHPAVLE 327
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKT 421
A+VA D+ WG+ PCAFV L+ +++ T E II FCR + H+ A K ++ ELPKT
Sbjct: 328 AAVVAAPDEKWGEVPCAFVVLRPDMTA--TAEEIIAFCRQNMAHFKAPKRIVFS-ELPKT 384
Query: 422 ATGKIQKFV 430
+TGKIQK+V
Sbjct: 385 STGKIQKYV 393
>gi|402774086|ref|YP_006593623.1| AMP-dependent synthetase and ligase [Methylocystis sp. SC2]
gi|401776106|emb|CCJ08972.1| AMP-dependent synthetase and ligase [Methylocystis sp. SC2]
Length = 552
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 188/446 (42%), Positives = 275/446 (61%), Gaps = 28/446 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ L H+E+K L VD + S + AL+L + +P++I D S
Sbjct: 103 RLDASILAFTLDHAEAKALIVDREFSDVIREALALAKA-----RPLII--DYSDPEYDGP 155
Query: 65 GHP---------------NFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
G P +++W P EWD ++LNYTSGTT PKGVV+ HRG ++ +
Sbjct: 156 GEPLGAVDYEEFLRSGDADYQWSPPGDEWDAISLNYTSGTTGDPKGVVYHHRGAYLTALG 215
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+++ + P++LWTLPMFH NGW + W ++ GT++CLR+V IY ++ HGVTH
Sbjct: 216 NVLTGDMGRHPIYLWTLPMFHCNGWCFPWSISVNAGTHVCLRQVRAGHIYELMAEHGVTH 275
Query: 170 ICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
+CGA +V++ L + KPL R + T+ A PP AVL ++ GF V+H YGLTET
Sbjct: 276 LCGAPIVMSTLLNARESEKKPLKRAARFFTAAAPPPQAVLAGMKAAGFEVTHLYGLTETY 335
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G W W++L +A++KARQGVR + L ++DV++P+T V DG + GE++F
Sbjct: 336 GPAAVNEWHDDWDSLDGGAQAQMKARQGVRYLVLENLDVINPDTMQPVPRDGATMGEVMF 395
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R +M GYLK++ G+S WF++GD+GV H DGY++++DRSKD+IISGGENISS
Sbjct: 396 RGNVVMKGYLKNK-GASEKAFHGGWFHSGDLGVRHPDGYIQLRDRSKDIIISGGENISSI 454
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE L+ +P + VA+VA D WG+ PCAFV LK ++ + E +I++ R L H+
Sbjct: 455 EVEDALFRHPKVRAVAVVAAPDDKWGETPCAFVELK--DGEQASAEELIDWTRQHLAHFK 512
Query: 408 AHKSVIIEDELPKTATGKIQKFVLRE 433
+ V+ ELPKT+TGKI+K+VLRE
Sbjct: 513 CPRHVVF-CELPKTSTGKIRKYVLRE 537
>gi|171319730|ref|ZP_02908819.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
gi|171095039|gb|EDT40054.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria MEX-5]
Length = 550
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 194/442 (43%), Positives = 266/442 (60%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V +L H E+K+L VD + + LA A P I+ + D + + T
Sbjct: 102 RLDISSVLFMLRHGEAKVLIVDTEYADLAHRAAREVPGLKIVSVADAMPADPARFAGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P++ W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFVAGGDPDYAWTPPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRSERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAEFRAGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ L D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWDALPDDERARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPKATDEAFH-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE II C+ L + K V+
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELRDGASA--TEEEIIAHCKQLLAGFKVPK-VVRF 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRNEVGS 539
>gi|85704594|ref|ZP_01035696.1| acyl-CoA synthase [Roseovarius sp. 217]
gi|85671002|gb|EAQ25861.1| acyl-CoA synthase [Roseovarius sp. 217]
Length = 556
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 185/443 (41%), Positives = 261/443 (58%), Gaps = 24/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD ++ L H+ S+++ VD + PL ALSL P+LI D S P
Sbjct: 103 RLDAAIIAFQLDHALSRVVIVDREFMPLMQDALSLAKVT-----PLLIQYDDPEFSGPEF 157
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
+ G P F W+ PE EWD +++NYTSGTT PKGVV HRG +++ +
Sbjct: 158 ATDAEDYEIVLSAGDPAFDWLMPEDEWDAISINYTSGTTGDPKGVVSHHRGAYLLAQGNA 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ + V+LWTLPMFH NGW + W ++A+ GT++CLR+V I+ + VTH+C
Sbjct: 218 LTTSMAKHAVYLWTLPMFHCNGWCFPWTLSAIIGTHVCLRQVRADPIWEALAQERVTHLC 277
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V++++ S+P T PLD+ V+ T+ A PP +L + GF V+H YGLTET G
Sbjct: 278 GAPIVMSLMISAPETVKHPLDQRVQFFTAAAPPPEKLLAEMKDAGFDVTHLYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V W W+ L ++A+LKARQGVR + L +DV+ PE+ V DGQ+ GE++FR
Sbjct: 338 AVVNDWHDAWSALPAAQQAKLKARQGVRYLALEGLDVMDPESMTPVPCDGQTMGEVMFRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY ++ + + WF++GD+GV H DGY+++KDRSKDVIISGGENISS EV
Sbjct: 398 NVVMKGYFRNPQATQDAFA-GGWFHSGDLGVRHPDGYIQLKDRSKDVIISGGENISSIEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY PA+ A+VA + WG+ PCAFV L + E + +CR L Y
Sbjct: 457 EEALYRYPAVAVTAVVAMPHEKWGETPCAFVELT--EGQVADAETLRAWCRDHLAPYKVP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
+ +P+T+TGKIQKF+LR
Sbjct: 515 GHFVFL-PIPRTSTGKIQKFLLR 536
>gi|187921400|ref|YP_001890432.1| acyl-CoA synthetase [Burkholderia phytofirmans PsJN]
gi|187719838|gb|ACD21061.1| AMP-dependent synthetase and ligase [Burkholderia phytofirmans
PsJN]
Length = 543
Score = 342 bits (876), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 193/442 (43%), Positives = 267/442 (60%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD + +L H E+K L VD + A A FP ++ + D S T
Sbjct: 102 RLDVSSLLFMLRHGEAKALIVDTEYGEFAHRAALEFPDLRVISVADAMPADPSQFIRATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P F W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFLQSGDPEFAWAMPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLNALSNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
++LWTLP+FH NGW + W +AA G N+CLRK D ++ +I+ G+TH CGA +V
Sbjct: 222 KHAIYLWTLPLFHCNGWCFPWTVAARAGVNVCLRKFDAKTVFDLIRREGITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ L+++P+ + ++ V + +GA+P AV+ + + +GF ++H YGLTET G CA
Sbjct: 282 SALANAPAQWREGIEHRVSTMVAGAAPAPAVIAKMKEIGFDLTHVYGLTETYGPAAVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ +W L D RA + ARQGVR A + V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QEEWEALDDGARAEMNARQGVRYHLQAAVTVLDPDTLTPVPDDGETIGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK++ + + WF+TGD+GV DGY+ I+DRSKD+IISGGENISS EVE LY
Sbjct: 402 YLKNERATEATFQ-GGWFHTGDLGVRMPDGYIRIRDRSKDIIISGGENISSIEVEDTLYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA++ A+VA D WG+ PCAFV LK E ++ EE II CR L Y K+V
Sbjct: 461 HPAVSVAAVVAMADPKWGEVPCAFVELK-EGAQVSAEE-IIAHCRLFLAGYKLPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR + A
Sbjct: 518 GELPKTSTGKIQKFELRARIKA 539
>gi|119897986|ref|YP_933199.1| acyl-CoA synthetase [Azoarcus sp. BH72]
gi|119670399|emb|CAL94312.1| putative AMP-binding protein [Azoarcus sp. BH72]
Length = 550
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 196/447 (43%), Positives = 268/447 (59%), Gaps = 23/447 (5%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS 61
V RLD + V+ +L+H E+K+L D + S + A+ L P ++I D +
Sbjct: 103 VNTRLDAEGVAFILNHGEAKVLITDREYSRMVGKAIELANR----PDMIVIDVDDPEYTG 158
Query: 62 P-------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
P G+P F++ QP EWD ++LNYTSGTT +PKGVV+ HRG ++ +
Sbjct: 159 PGERVGKLDYEALLETGNPEFEYEQPGDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAM 218
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
S+++ W +P V+LWTLPMFH NGW ++W MAA G N+CLR+VD +I+ ++ HGVT
Sbjct: 219 SNIVSWGMPPHSVYLWTLPMFHCNGWCFAWTMAANAGVNVCLRRVDPRLIFDAMREHGVT 278
Query: 169 HICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H CGA +V +ML+++P K ++ V L + A PPAAV+ +G ++H YGLTET
Sbjct: 279 HYCGAPIVHSMLANAPEEWRKGINHKVSGLVAAAPPPAAVIEGMAKIGIDITHVYGLTET 338
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G CA +W L E+ RQGVR + V+ P T V D ++ GEI+
Sbjct: 339 YGPASVCAKHDEWRDLPLAEQVAKNGRQGVRYHAQEGITVLDPTTMEPVPWDNETMGEIM 398
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
FR +M GYLK+++ + R W++TGD+ V+ DGY++IKDRSKDVIISGGENISS
Sbjct: 399 FRGNLVMKGYLKNEKATEESFR-GGWYHTGDLAVMQPDGYVKIKDRSKDVIISGGENISS 457
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
EVE LY +PA+ A+VA D+ WG+ PCAFV LK T E II CR L +
Sbjct: 458 IEVEDALYKHPAVMAAAVVAAPDEKWGEVPCAFVELK--DGATVTAEEIIAHCREHLAGF 515
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLRE 433
K VI LPKT+TGKIQKFVLRE
Sbjct: 516 KTPKKVIF-GALPKTSTGKIQKFVLRE 541
>gi|219848475|ref|YP_002462908.1| acyl-CoA synthetase [Chloroflexus aggregans DSM 9485]
gi|219542734|gb|ACL24472.1| AMP-dependent synthetase and ligase [Chloroflexus aggregans DSM
9485]
Length = 549
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 189/441 (42%), Positives = 262/441 (59%), Gaps = 16/441 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAAL-----SLFPSNTILPKPVLIHDDVSAT 59
RLD ++ +L H E+K+L D + +P+ AAL SL + P+ D +
Sbjct: 102 RLDAATIAFILEHGEAKVLITDREFAPVVRAALDRIERSLLVIDVDDPEYTGPGDRLGTV 161
Query: 60 SSPTV---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
G P F+ + P EW+ + LNYTSGTT++PKGVV+ HRG ++ +S+++ W +
Sbjct: 162 EYEQFIAGGDPAFELIYPADEWEAITLNYTSGTTANPKGVVYHHRGAYLNALSNIVSWGM 221
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P+ V+LWTLPMFH NGW + W MAA GTNICLRKVD +I+ I+ H VTH CGA +V
Sbjct: 222 PHHAVYLWTLPMFHCNGWCFPWTMAANAGTNICLRKVDAGLIWQAIEEHRVTHYCGAPIV 281
Query: 177 LNMLSSSPSTK----PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
++++++ V L + A PP AVL +GF ++H YGLTET G
Sbjct: 282 HSLIANNAPAHWRAGQGTYKVSGLIAAAPPPVAVLQAMAEIGFEITHVYGLTETYGPAAV 341
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA + W+ L E+ARL RQGV + V+ P T V DGQ+ GE++FR +
Sbjct: 342 CAKQPDWHRLPIEEQARLNGRQGVNYHAEEAVSVLDPVTMQPVPWDGQTMGEVMFRGNIV 401
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + RD WF++GD+ VVH DGY++I DR+KD+IISGGENISS EVE
Sbjct: 402 MKGYLKNPTATEAAFRDG-WFHSGDLAVVHPDGYIKITDRAKDIIISGGENISSIEVEDA 460
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ A+VA D WG+ P AF+ L+ ++ TEE + + CR L Y K
Sbjct: 461 LYKHPAVLLAAVVAAPDPKWGEVPHAFIELRDGMTV--TEEELQQHCRKYLAGYKVPKKF 518
Query: 413 IIEDELPKTATGKIQKFVLRE 433
LPKT+TGKIQK++LRE
Sbjct: 519 TF-GPLPKTSTGKIQKYILRE 538
>gi|115358463|ref|YP_775601.1| acyl-CoA synthetase [Burkholderia ambifaria AMMD]
gi|115283751|gb|ABI89267.1| AMP-dependent synthetase and ligase [Burkholderia ambifaria AMMD]
Length = 550
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 266/442 (60%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V +L H E+K+L VD + + LA A P I+ + D + + T
Sbjct: 102 RLDISSVLFMLRHGEAKVLIVDTEYADLAHRAAREVPGLKIVSVADAMPADPARFAGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFVAGGDPDYAWTPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRSERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAEFRAGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ L D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWDALPDDERARLNARQGVRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPKATDEAFH-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE I+ C+ L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELREGASA--TEEEIVAHCKQLLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRNEVGS 539
>gi|423014980|ref|ZP_17005701.1| AMP-dependent synthetase and ligase family protein [Achromobacter
xylosoxidans AXX-A]
gi|338782020|gb|EGP46398.1| AMP-dependent synthetase and ligase family protein [Achromobacter
xylosoxidans AXX-A]
Length = 550
Score = 341 bits (875), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 190/448 (42%), Positives = 273/448 (60%), Gaps = 23/448 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H + +L D + + L L + P+ V I D A +
Sbjct: 105 RLDARTLAFILEHGGATVLLYDSEYAALVREVLGHLRAP---PRTVRIEDSEYAGPHGDL 161
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G ++ W P+ EWD + LNYTSGTT +PKGV++ HRG ++ +++
Sbjct: 162 GDAEYEAWLAAQPADAPWQGPQDEWDNLCLNYTSGTTGNPKGVLYHHRGAYLNATGNVLA 221
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+P V+LWTLPMFH NGW + W MAA+ GTN+CLR+V+ I++ I+ H V C A
Sbjct: 222 CGMPPHAVYLWTLPMFHCNGWCFPWTMAALAGTNVCLRRVEPAAIFAAIRRHQVGFFCAA 281
Query: 174 LVVLNMLSSSPST---KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
VVLNML ++P+ + R V+ +T GA+PPAA++ E LG V+H YGLTET G
Sbjct: 282 PVVLNMLVNAPADVRHRATHR-VQAMTGGAAPPAAIIEAMEQLGVGVTHLYGLTETYGPS 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+SCAW +W+ L ERA LKAR GVR + + + V+ + V DG + GEI+ R
Sbjct: 341 ISCAWHEEWDDLPLAERAALKARIGVRKLNVEAVRVMDADL-RPVPADGATLGEIMLRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYL + + ++ WF++GD+ VVH DGY+EIKDR+KD+IISGGENIS+ E+E
Sbjct: 400 TLMKGYLHNLDATAEAFA-GGWFHSGDLAVVHPDGYIEIKDRAKDIIISGGENISTVEIE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SVLY +P + E A+VA+ D WG+ PCAFV+LK + + +I +CR L + A +
Sbjct: 459 SVLYRHPDVLEAAVVARPDAVWGETPCAFVTLKEGAACGADD--LIAYCREHLARFKAPR 516
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
+V+ LPKT+TGKIQKFVLRE A+
Sbjct: 517 TVLF-GALPKTSTGKIQKFVLREQAAAL 543
>gi|359494714|ref|XP_002268559.2| PREDICTED: medium-chain-fatty-acid--CoA ligase-like, partial [Vitis
vinifera]
Length = 482
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 184/454 (40%), Positives = 274/454 (60%), Gaps = 27/454 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVS--ATSSP 62
RLD ++++L E+K++FVDYQ + L AL + I P +++ + AT S
Sbjct: 31 RLDSTMLALILQQLEAKIIFVDYQFLQVFLQALDILSEAKIKPPILVLILECCHPATFSS 90
Query: 63 TV----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
T+ G P+F+ ++P +E P+++NYTSG+T +PKGVV+ HR ++
Sbjct: 91 TIEKIPAGNLDYDGLLAMGQPDFEIIRPSNECTPISVNYTSGSTGNPKGVVYSHRAAYLN 150
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+++ + + PVFLWT+ MF NGW + W +AA+ GTNICLRKV +IY I H
Sbjct: 151 SLAVIFRSDLKQMPVFLWTVDMFRCNGWCFPWTVAALCGTNICLRKVSAKVIYGAIFLHN 210
Query: 167 VTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH CGA +LN+++ + T +PL V I+ +GA PP VL++ LGF V+HSYG+T
Sbjct: 211 VTHFCGAPSLLNLIADAAVTDQRPLPHKVDIVIAGALPPPQVLMKVVELGFNVTHSYGMT 270
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
E G V + W + N+ + A++K QG+ + + +DV P T SV D ++ GE
Sbjct: 271 EALGPVTARLWHPEPNSY---QHAKIKCCQGLHNLIMEGVDVKDPSTMKSVPRDRKTIGE 327
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++FR ++M+GY K+ + + R W+ TGD+ V+H DGY+++KDRSKDVIISG + I
Sbjct: 328 VMFRGNTMMMGYHKNLKATQEAFR-GGWYRTGDLAVMHPDGYIQMKDRSKDVIISGVKTI 386
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
S+ E+E+VL +P + EVA+V + D G+ PCAF+ LK + E I FC RLP
Sbjct: 387 STIEIEAVLVGHPMVMEVAVVGRPDDCLGETPCAFLKLKEGCATSADE--ITNFCAERLP 444
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
YM +++I D LP +TGKIQKFVLRE AV
Sbjct: 445 TYMVPQTIIFGD-LPVNSTGKIQKFVLREKAKAV 477
>gi|423016924|ref|ZP_17007645.1| acyl-CoA synthetase [Achromobacter xylosoxidans AXX-A]
gi|338780035|gb|EGP44455.1| acyl-CoA synthetase [Achromobacter xylosoxidans AXX-A]
Length = 545
Score = 340 bits (873), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 196/445 (44%), Positives = 270/445 (60%), Gaps = 20/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD-DVSATSSP- 62
RLD V +L H E++ L VD + + LA A + FP + + +HD D + + P
Sbjct: 102 RLDTPSVLFMLGHGEARALIVDTEYAELAQRARAEFPHLKV----ISVHDLDGAPATLPG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
F W P EWD +ALNYTSGTT PKGVV+ +RG ++ VS++++W
Sbjct: 158 ATDYEAFLAAAPATFDWRPPADEWDAIALNYTSGTTGDPKGVVYHYRGAYLNAVSNILEW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P PV+LWTLP+FH NGW ++W +AA G N+CLRK D ++ +I+ GVTH CGA
Sbjct: 218 DMPKHPVYLWTLPLFHCNGWCFAWTVAARAGVNVCLRKFDPKTVFDLIRAEGVTHYCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+V + L+++P+ + V + +GA+P AV+ + + +GF ++H YGLTE G
Sbjct: 278 IVQSALANAPAELRAGIAHTVCTMVAGAAPAPAVIAKMKEIGFELTHVYGLTEVYGPAAV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA + W+ L D +RA L ARQGVR A + V +P+T V D Q+ GEI+FR
Sbjct: 338 CATQDAWDDLEDEQRALLTARQGVRYHLQAGVSVRNPDTMEEVPADEQTVGEIMFRGNIC 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK++ + D WF+TGD+GV+ DGY+ IKDRSKD+IISGGENISS EVE
Sbjct: 398 MKGYLKNERATDEAFSDG-WFHTGDLGVMTPDGYIRIKDRSKDIIISGGENISSIEVEDA 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ VA+VA D WG+ PCAFV LK + T E II C+ LP + ++V
Sbjct: 457 LYRHPAVAAVAVVAMPDPKWGETPCAFVELKPGCNA--TAEEIIAHCKLLLPGFKVPRAV 514
Query: 413 IIEDELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 515 RF-GELPKTSTGKIQKFELRAAVGS 538
>gi|119476024|ref|ZP_01616376.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
gi|119450651|gb|EAW31885.1| acyl-CoA synthase [marine gamma proteobacterium HTCC2143]
Length = 542
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 188/439 (42%), Positives = 270/439 (61%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALS--------LFPSNTILPKPVLIHDDV 56
RLD + + H E +L +D Q + +A ALS + +++ P+ V I
Sbjct: 102 RLDADTFAYIFDHGECDVLLIDAQFAEVAKQALSKSSRRPLIIDLDDSLGPRSVRI-GST 160
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ G+P+ P EW +ALNYTSGTT +PKGVV+ HRG + +++ W +
Sbjct: 161 TYEQFLLTGNPDIVPALPADEWQSLALNYTSGTTGNPKGVVYHHRGAHQNAMGNILAWNM 220
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+ P +LWTLPMFH NGW + W + + G ++CLR V I I + V+H+CGA +V
Sbjct: 221 GHAPTYLWTLPMFHCNGWCFPWTITLLAGVHVCLRDVAADAIIESIVANDVSHMCGAPIV 280
Query: 177 LNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
L+M++++P + + +KI+T+GA+PPAAV++ E LG ++H+YGLTE G V CA
Sbjct: 281 LSMIANAPEVLRNQIPKGIKIMTAGAAPPAAVIVAIEDLGAEITHTYGLTEVYGPCVYCA 340
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W ++W+ L+ RA +KARQGV L ++DV+ PET V DG++ GE++FR +M
Sbjct: 341 WHTEWDELSREHRAAMKARQGVAYPVLNNLDVLDPETMRPVPDDGETIGEVMFRGNVVMK 400
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ + + + D WF++GD+ V H D Y+EIKDRSKD+IISGGENISS EVES LY
Sbjct: 401 GYLKNPDATREALADG-WFHSGDLAVKHPDNYIEIKDRSKDIIISGGENISSIEVESALY 459
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+ A+ A+VA+ D WG+ PCAFV LK + + +I F R L + K VI
Sbjct: 460 QHSAVLSAAVVAKADDKWGETPCAFVELKDGTTLD--AQTLIAFSRNHLASFKIPKHVIF 517
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKT+TGKIQKF+LRE
Sbjct: 518 -GELPKTSTGKIQKFILRE 535
>gi|254248496|ref|ZP_04941816.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
PC184]
gi|124874997|gb|EAY64987.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
PC184]
Length = 550
Score = 340 bits (873), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 265/442 (59%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V +L H E+K+L VD + + +A A P I+ + D + T
Sbjct: 102 RLDASSVLFMLRHGEAKVLIVDTEYAEIAQRAALEVPGLKIVSVADALPADPDRFAGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFVAGGDPDYAWTPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAELRAGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ ++D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWDAVSDEERARLNARQGVRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+ V+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPKATDEAFH-GGWFHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE I+ CR L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELREGASA--TEEEIVAHCRQLLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRNAVGS 539
>gi|107026422|ref|YP_623933.1| acyl-CoA synthetase [Burkholderia cenocepacia AU 1054]
gi|116692390|ref|YP_837923.1| acyl-CoA synthetase [Burkholderia cenocepacia HI2424]
gi|170735608|ref|YP_001776868.1| acyl-CoA synthetase [Burkholderia cenocepacia MC0-3]
gi|105895796|gb|ABF78960.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia AU
1054]
gi|116650390|gb|ABK11030.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
HI2424]
gi|169817796|gb|ACA92378.1| AMP-dependent synthetase and ligase [Burkholderia cenocepacia
MC0-3]
Length = 550
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 265/442 (59%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V +L H E+K+L VD + + +A A P I+ + D + T
Sbjct: 102 RLDASSVLFMLRHGEAKVLIVDTEYAEVAQRAALELPGLKIVSVADALPADPDRFAGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFVAGGDPDYAWTPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAELRAGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ ++D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWDAVSDEERARLNARQGVRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+ V+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPKATDEAFH-GGWFHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE I+ CR L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELREGASA--TEEEIVAHCRQLLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRHAVGS 539
>gi|254503284|ref|ZP_05115435.1| AMP-binding enzyme, putative [Labrenzia alexandrii DFL-11]
gi|222439355|gb|EEE46034.1| AMP-binding enzyme, putative [Labrenzia alexandrii DFL-11]
Length = 544
Score = 340 bits (872), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 197/441 (44%), Positives = 276/441 (62%), Gaps = 19/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSL----FPSNTIL----PKPVLIHDDV 56
RL+ + V+ +L HS++KL+ D S + A + P I P LI D+V
Sbjct: 101 RLEPETVAYILEHSDAKLVIADTAFSGVISQAFDINGKPLPVINIADPDGPGGNLIGDEV 160
Query: 57 --SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
SS G P+F W P EW +ALNYTSGT+ PKGVV+ HRG +++ + + I W
Sbjct: 161 FEGLVSS---GDPDFPWQGPADEWQALALNYTSGTSGRPKGVVYHHRGAYLMAMGTPIAW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P PV+L+++PMFH NGW ++W M + GT IC+R+V ++ +I H VTH+ GA
Sbjct: 218 ELPRHPVYLYSVPMFHCNGWCHAWTMTLMAGTIICIRQVTGAAVFDLIAKHQVTHLGGAP 277
Query: 175 VVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VL+ML ++P P VKI+T+GA PPAAVL T++LGF V YGLTET G V
Sbjct: 278 IVLSMLVNTPEADRTSSPGKVKIMTAGAPPPAAVLAATKALGFEVMQVYGLTETYGHVAQ 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C W+ +W+ L+ E+A L++ QGV +DV+ E+G V DG++QGEIV R ++
Sbjct: 338 CLWREEWDDLSADEQAELQSWQGVGFPMTESVDVIDRESGEPVPWDGETQGEIVIRGNTV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GY K++E + F +GD V H +GY++I+DR KDVIISGGENISS EVE V
Sbjct: 398 MKGYYKNREATDEAFSGGH-FQSGDAAVRHENGYVQIRDRLKDVIISGGENISSVEVEGV 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L+ +P + A+VA D+ WG+ PCAFV LK E S++ TE+++I FCR + + K +
Sbjct: 457 LHRHPDVVLAAVVALPDEKWGEVPCAFVELK-EGSQE-TEDSLIAFCRQNMAGFKRPKKI 514
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+ ELPKTATGKIQKFVLR+
Sbjct: 515 VF-TELPKTATGKIQKFVLRQ 534
>gi|422318025|ref|ZP_16399313.1| AMP-dependent synthetase and ligase [Achromobacter xylosoxidans
C54]
gi|317407385|gb|EFV87349.1| AMP-dependent synthetase and ligase [Achromobacter xylosoxidans
C54]
Length = 545
Score = 340 bits (872), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 195/445 (43%), Positives = 269/445 (60%), Gaps = 20/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD-DVSATSSP- 62
RLD V +L H E++ L VD + + +A A + FP + + +HD D + + P
Sbjct: 102 RLDTPSVLFMLGHGEARALIVDTEYAEVAQRARAEFPHLKV----ISVHDLDGAPATLPG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
F W P EWD +ALNYTSGTT PKGVV+ +RG ++ VS++++W
Sbjct: 158 ATDYEAFLAAAPATFDWRPPADEWDAIALNYTSGTTGDPKGVVYHYRGAYLNAVSNILEW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P PV+LWTLP+FH NGW ++W +AA G N+CLRK D ++ +I+ GVTH CGA
Sbjct: 218 DMPKHPVYLWTLPLFHCNGWCFAWTVAARAGVNVCLRKFDPKTVFDLIRAEGVTHYCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+V + L+++P+ + V+ + +GA+P AV+ + + +GF ++H YGLTE G
Sbjct: 278 IVQSALANAPAELRAGITHTVRTMVAGAAPAPAVIAKMKEIGFELTHVYGLTEVYGPAAV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA + WN L D +RA L ARQGVR A + V +P+T V D Q+ GEI+FR
Sbjct: 338 CAPQDAWNDLEDEQRALLTARQGVRYHLQAGVSVRNPDTMEEVPADEQTVGEIMFRGNIC 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK++ + WF+TGD+GV+ DGY+ IKDRSKD+IISGGENISS EVE
Sbjct: 398 MKGYLKNERATDEAF-GGGWFHTGDLGVMTPDGYIRIKDRSKDIIISGGENISSIEVEDA 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ VA+VA D WG+ PCAFV LK T E II C+ LP + ++V
Sbjct: 457 LYRHPAVAAVAVVAMPDPKWGETPCAFVELK--PGHSATAEEIIAHCKLLLPGFKVPRAV 514
Query: 413 IIEDELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 515 RF-GELPKTSTGKIQKFELRAAVGS 538
>gi|224151318|ref|XP_002337088.1| predicted protein [Populus trichocarpa]
gi|222837992|gb|EEE76357.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/449 (38%), Positives = 265/449 (59%), Gaps = 22/449 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVL------------- 51
RLD +++ L +KL+FVDYQ + +AL AL L ++ P ++
Sbjct: 58 RLDASTLALTLEQLNAKLIFVDYQFNDVALKALDLLSLKSVKPPHLVGIPECDKSTSSMD 117
Query: 52 ---IHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
I D+ +G +F ++P E DP+++NYTSG+T PKGV++ HR ++ ++
Sbjct: 118 CKNISCDLDYNGLLEMGRDDFTIIRPNKECDPISVNYTSGSTGKPKGVIYSHRAAYLNSL 177
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
+ + + + PVFLWT+ MF NGW +W MAA+G TNICLR V +I+ I H VT
Sbjct: 178 AEIFRFDMRQMPVFLWTVDMFRCNGWCLTWAMAALGATNICLRNVSAEVIFDSISLHKVT 237
Query: 169 HICGALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
H CG +LN ++++P+ PL V ++ +G P + +L + E LGF V H YG+TE
Sbjct: 238 HFCGPPAILNTIANAPAGNQNPLPFNVNVIIAGPFPYSEILTKVEGLGFNVYHGYGMTEA 297
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G + WK + ++ + E+ +++ R+G+ + + +DV P T SV DG++ GE++
Sbjct: 298 LGPAIVRPWKPELDSTFENEQEKIRNREGLHNLLIEGVDVKDPNTMKSVPRDGKTIGEVM 357
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
FRS +M GYLK+ E + R W++TGD+GV H +GY+++KDR KD+IISGGE IS+
Sbjct: 358 FRSNILMSGYLKNSEVTQEAFR-GGWYHTGDLGVRHQNGYIQMKDRGKDIIISGGEAIST 416
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
EVE+VL +P ++E A+V Q D + PCAFV +K + E I FC RLP +
Sbjct: 417 LEVEAVLLSHPKVSEAAVVGQPDAILNEVPCAFVKVKEGFGA--SAEEITNFCGNRLPDH 474
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLREIV 435
M KS++ D LP +GK+QKF +RE V
Sbjct: 475 MIPKSIVFGD-LPVNFSGKVQKFAIREKV 502
>gi|392952437|ref|ZP_10317992.1| acyl-CoA synthetase [Hydrocarboniphaga effusa AP103]
gi|391861399|gb|EIT71927.1| acyl-CoA synthetase [Hydrocarboniphaga effusa AP103]
Length = 541
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 194/445 (43%), Positives = 278/445 (62%), Gaps = 22/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-----HDDVSAT 59
RLD + ++ +L H E+++L D + SP+ AL++ +P++I H D T
Sbjct: 104 RLDAEAIAFMLEHGEARVLITDCEFSPVVSKALAMLGER----RPLVIDVRDPHIDGGET 159
Query: 60 SSP-------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P + W P+ EW+ +ALNYTSGTT +PKGVV+ HRG + ++++++
Sbjct: 160 LGALDYEALLAEGDPGYAWSLPQDEWEAIALNYTSGTTGNPKGVVYHHRGAHLNSIANIV 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P V+LWTLPMFH NGW + W +AA GT++CLR+VD +I+ +IK H VTH CG
Sbjct: 220 TWGMPAHAVYLWTLPMFHCNGWCFPWTLAANAGTHVCLRRVDPVLIFELIKQHRVTHFCG 279
Query: 173 ALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V +ML ++P S + L PV + +GA+PPAA++ E +G ++H+YGLTET G
Sbjct: 280 APIVHSMLINAPESSRQGLGHPVAAMIAGAAPPAAIIEGMERIGVSITHAYGLTETYGPA 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + +W TL E+A ARQGV M V+ P+T V DG++ GEI+FR
Sbjct: 340 AICARQPEWETLPLPEKAERHARQGVPNHLQQAMAVLDPQTMQPVPADGETMGEIMFRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + + WF++GD+ VV SDGY++I+DRSKDVIISGGENISS EVE
Sbjct: 400 IVMKGYLKNPTATEESL-AGGWFHSGDLAVVQSDGYVKIRDRSKDVIISGGENISSIEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
LY +PA+ A+VA+ D WG+ PCA V L+ + P E ++E CR L + +
Sbjct: 459 DALYRHPAVMAAAVVAKLDDKWGEVPCACVELREGSTVTPEE--LVEHCRRYLARFKVPR 516
Query: 411 SVIIEDELPKTATGKIQKFVLREIV 435
V+I LPKT+TGKIQKF+LR+ V
Sbjct: 517 HVVI-GPLPKTSTGKIQKFLLRQRV 540
>gi|422323249|ref|ZP_16404288.1| AMP-dependent synthetase and ligase [Achromobacter xylosoxidans
C54]
gi|317401767|gb|EFV82384.1| AMP-dependent synthetase and ligase [Achromobacter xylosoxidans
C54]
Length = 550
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/443 (42%), Positives = 266/443 (60%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H + +L D + +PL L + P+ V I D S +
Sbjct: 105 RLDARTLAFILEHGGATVLLYDSEYAPLVREVLGHLRAP---PRTVRIEDSEYTGSHGDL 161
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G ++ W P EWD + LNYTSGTT +PKGV++ HRG ++ +++
Sbjct: 162 GDAEYEAWLAAQPADAPWEGPRDEWDNLCLNYTSGTTGNPKGVLYHHRGAYLNATGNVLA 221
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+P V+LWTLPMFH NGW + W MAA+ GTN+CLR+V+ I+ I+ H V C A
Sbjct: 222 CGMPPHAVYLWTLPMFHCNGWCFPWTMAALAGTNVCLRRVEPAAIFEAIRRHRVGFFCAA 281
Query: 174 LVVLNMLSSSPST---KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
VVLNML ++P+ + R V+ +T GA+PPAA++ E LG V+H YGLTET G
Sbjct: 282 PVVLNMLVNAPADARHRATHR-VQAMTGGAAPPAAIIEAMEQLGVGVTHLYGLTETYGPS 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+SCAW +W+ ERA LKAR GVR + + + V+ V DG + GEI+ R
Sbjct: 341 ISCAWHDEWDDRPLAERAALKARIGVRKLNVEAVQVMDAAM-RPVPADGATLGEIMLRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYL + E ++ WF++GD+ VVH DGY+EIKDR+KD+IISGGENIS+ E+E
Sbjct: 400 TLMKGYLHNPEATADAFA-GGWFHSGDLAVVHPDGYIEIKDRAKDIIISGGENISTVEIE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
SVLY +P + E A+VA+ D WG+ PCAFV+LK + +I +CR L + +
Sbjct: 459 SVLYCHPDVLEAAVVARPDAVWGETPCAFVTLK--DGAACGADDLIAYCREHLARFKTPR 516
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+V+ LPKT+TGKIQKFVLRE
Sbjct: 517 TVVF-GALPKTSTGKIQKFVLRE 538
>gi|338740667|ref|YP_004677629.1| AMP-dependent synthetase/acyl-CoA ligase [Hyphomicrobium sp. MC1]
gi|337761230|emb|CCB67063.1| putative AMP-dependent synthetase/acyl-CoA ligase [Hyphomicrobium
sp. MC1]
Length = 541
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/447 (40%), Positives = 267/447 (59%), Gaps = 24/447 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-HDDVSATSSPT 63
RLD ++ L H +K+L D + + + AL++ KP++I ++D+ +
Sbjct: 102 RLDPAILAFQLDHGGAKVLITDREFANIMKPALAMAKV-----KPIIIDYNDLEFPQTGE 156
Query: 64 V------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P+FKW P+ EW+ ++LNYTSGTT +PKGVV+ HRG ++ ++
Sbjct: 157 ALSSIDYEAFLQGGDPDFKWRWPKDEWEAISLNYTSGTTGNPKGVVYHHRGAALMCYANA 216
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
I + PV+LWTLPMFH NGW + W + V GT++CLR V +Y I H V+H+
Sbjct: 217 ISTGMTRFPVYLWTLPMFHCNGWCFPWTITMVQGTHVCLRWVRAKAMYDYIVAHKVSHLS 276
Query: 172 GALVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V+ L ++P + ++ V + A PPA+V+ GF ++H YGLTET G
Sbjct: 277 GAPIVMATLLNAPDDEKQKIEHGVAFNHAAAPPPASVISAMTDAGFQLTHLYGLTETYGP 336
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
W + W+ L ER+ + RQGVR + L + V PET V DG++ GE++FR
Sbjct: 337 ATINEWDASWSDLPPAERSAKRIRQGVRYVALEGLSVRDPETMQEVTPDGETLGEVMFRG 396
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+++ + WF++GD+GV+H DGY+++KDRSKD+IISGGENISS EV
Sbjct: 397 NIVMKGYLKNEKATDEAFA-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEV 455
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VLY +PA+ A+VA+ D+ WG+ PCAF+ L+ T + IIE+CRA L Y
Sbjct: 456 EEVLYKHPAVAFCAVVAKPDEKWGETPCAFIELR--PGTTATADEIIEWCRAGLARYKVP 513
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVN 436
+ ++ E+PKT+TGKIQKF LRE+
Sbjct: 514 RHIVFA-EVPKTSTGKIQKFKLREMAK 539
>gi|169825388|ref|YP_001691281.1| hypothetical protein M446_7038 [Methylobacterium sp. 4-46]
gi|168199310|gb|ACA21256.1| hypothetical protein M446_7038 [Methylobacterium sp. 4-46]
Length = 544
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/448 (41%), Positives = 254/448 (56%), Gaps = 21/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD ++ L H E+K+L D + + + AL+ + V+ +DD +
Sbjct: 104 RLDAAMIASFLDHGEAKVLITDREFARVIKPALAHAKVRPL----VIDYDDPEFSGEGER 159
Query: 63 ----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P W P E D + LNYTSGTT PKGVV+ HRG + V +++
Sbjct: 160 LGSLDYEAFLASGDPAHAWSLPGDERDAITLNYTSGTTGDPKGVVYDHRGACLQAVGNVV 219
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W ++ V GT++CLR+V +Y I HGVTH+CG
Sbjct: 220 TTGLGKHPVYLWTLPMFHCNGWCFPWTLSVVAGTHVCLRQVRAKAVYDAIADHGVTHLCG 279
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VV+ L ++P+ + L PV + GA PP A L GF V+H YGLTET G
Sbjct: 280 APVVMQQLLNAPAAERRALPHPVSFVVGGAPPPEAGLAGMAEAGFDVTHVYGLTETYGPA 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
V W + W+ L E+A KARQGVR L +DV+ P+T V DGQ+ GE++FR
Sbjct: 340 VVNEWHADWDALTTPEQAARKARQGVRYPPLEALDVLDPKTMRPVPADGQTVGEVMFRGN 399
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + + R WF++GD+GV H DGYL++KDRSKD+IISGGENI S EVE
Sbjct: 400 VVMRGYLKNPKATEEAFR-GGWFHSGDLGVKHPDGYLQLKDRSKDIIISGGENIWSIEVE 458
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
L+ +PA+ + +V + D+ WG+ CAFV K EE +I++CR L Y K
Sbjct: 459 EALFKHPAVADAGVVGKPDEKWGEAVCAFVERKNGFEMVSAEE-LIDWCRQSLASYKVPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
V ELPK +TGK K LRE+ A+
Sbjct: 518 HVFFT-ELPKNSTGKTNKVQLREMGKAL 544
>gi|421864766|ref|ZP_16296451.1| hypothetical protein I35_1141 [Burkholderia cenocepacia H111]
gi|358075386|emb|CCE47329.1| hypothetical protein I35_1141 [Burkholderia cenocepacia H111]
Length = 547
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 265/442 (59%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD----VSATS 60
RLD V +L H E+K+L VD + + +A A P I+ + D AT
Sbjct: 99 RLDVSSVLFMLRHGEAKVLIVDTEYAEVAQRAALEVPGLKIVSVADALPADPDRFAGATD 158
Query: 61 SPTV---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
T G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 159 YETFVAGGDPDYAWTPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 218
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 219 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQ 278
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 279 SAIANAPAEFRAGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 338
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+S W+ ++D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 339 QSHWDAVSDEERARLNARQGVRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKG 398
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+ V+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 399 YLKNPKATDEAFH-GGWFHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYR 457
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TE I+ CR L + K+V
Sbjct: 458 HPAVAVAAVVAMPDPKWGELPCAFVELREGASA--TEAEIVAHCRQLLAGFKVPKAVRF- 514
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 515 GELPKTSTGKIQKFQLRHAVGS 536
>gi|84514414|ref|ZP_01001778.1| AMP-binding protein [Loktanella vestfoldensis SKA53]
gi|84511465|gb|EAQ07918.1| AMP-binding protein [Loktanella vestfoldensis SKA53]
Length = 541
Score = 339 bits (869), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 193/447 (43%), Positives = 266/447 (59%), Gaps = 23/447 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-----HDDVSAT 59
RLD ++ +L H E+K++ VD Q P A+AA+ P P++I H + T
Sbjct: 103 RLDVDTIAYILDHGEAKVVLVDSQFLPQAMAAIDQMQG----PTPLVIEVPDDHAGILTT 158
Query: 60 SSP-------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ G P+F W+ P EW+ +ALNYTSGTT PKGVV+ HRG +++T+ + I
Sbjct: 159 GTQQNYEDFLATGDPDFAWILPHDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTLGTAI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P +L +P+FH NGW+++W + A+GGT IC R + IY I HG TH G
Sbjct: 219 SWEMPTFVRYLQIVPLFHCNGWNHTWMLPALGGTAICCRDITASTIYDAIADHGATHFGG 278
Query: 173 ALVVLNML-SSSPS-TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN+L ++ P + D V++ T+GA P A L LGF V YGLTET G V
Sbjct: 279 APIVLNLLVNAKPEHRRQFDHMVQVFTAGAPPAPATLAAIGKLGFHVKQVYGLTETFGHV 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C W W+TL + E+A +KARQGV + D+ VV+ + V DG +QGEIV R
Sbjct: 339 TECIWDPAWDTLPEAEQAAIKARQGVGFPIMEDVTVVNDQM-EPVPWDGTTQGEIVMRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ + + +F++ D+ + H DG ++I DR+KD+IISGGENISS EVE
Sbjct: 398 AVMKGYLKNPDATERAFA-GGYFHSEDLAIQHPDGMIQISDRAKDIIISGGENISSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+ L + A+N A+VAQ D+ WG+ PCAFV LK TE II F R RL + K
Sbjct: 457 AALMHHAAVNLCAVVAQSDEKWGEIPCAFVELK--DGATATEAEIIAFARERLAGFKCPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
V+ +D LPKT+TGKIQKF LR IV A
Sbjct: 515 RVVFQD-LPKTSTGKIQKFELRLIVKA 540
>gi|134293534|ref|YP_001117270.1| acyl-CoA synthetase [Burkholderia vietnamiensis G4]
gi|387905119|ref|YP_006335457.1| AMP-dependent synthetase and ligase [Burkholderia sp. KJ006]
gi|134136691|gb|ABO57805.1| AMP-dependent synthetase and ligase [Burkholderia vietnamiensis G4]
gi|387580011|gb|AFJ88726.1| AMP-dependent synthetase and ligase [Burkholderia sp. KJ006]
Length = 550
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 267/442 (60%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD + +L H E+K+L VD + + LA A P I+ + D + + T
Sbjct: 102 RLDIASMLFMLRHGEAKVLIVDTEYAELAHRAALEVPGLKIVSVADAMPADPARFAGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFVASGDPDYTWTPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLR+ D ++ +I++ +TH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAIAARAGVNVCLRRFDAKTVFDLIRNERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAELRAGIDHKVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ L D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWDDLPDDERARLNARQGVRYHLEAGATVLDPDTMEPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFQ-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TE+ I CR L + K V+
Sbjct: 461 HPAVEVAAVVAMPDPKWGEVPCAFVELRNGMSA--TEDEIFAHCRQLLAGFKVPK-VVRF 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRNAVGS 539
>gi|107101653|ref|ZP_01365571.1| hypothetical protein PaerPA_01002697 [Pseudomonas aeruginosa PACS2]
Length = 549
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/439 (41%), Positives = 270/439 (61%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL+ + ++ +L H +++L D + +A AL++ + +L V I DD + +
Sbjct: 103 RLEARSIAFILRHCAARVLICDREFGAVAQQALAMLDAPPLL---VGIDDDQAERADLAH 159
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P P++EW +A+NYTSGTT PKGVV HRG ++ + + +
Sbjct: 160 DLDYEAFLAQGDPGRPLSAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIF 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + V+LWTLPMFH NGWS++W + GGT++CLRKV I++ I H VTH+ A
Sbjct: 220 QLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAP 279
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
VV++ML + PV ++T GA+PP+AV+ E+ GF ++H+YG+TE+ G C
Sbjct: 280 VVMSMLIHAEHASVPAVPVSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCL 339
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ + L RA+ +RQGV L + V+ +TG V DG++ GE+V R ++M
Sbjct: 340 WQPGVDELPLEARAQFMSRQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMK 399
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYL + E + + D W +TGD+ V+H DGY+EIKDR+KD+IISGGENISS E+E VLY
Sbjct: 400 GYLHNPEATRAALSDG-WLHTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLY 458
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + E A+VA+ D WG+ P AFV+L+ + + T + ++ +CR RL H+ A + V +
Sbjct: 459 QHPEVVEAAVVARPDSRWGETPHAFVALRADALPRTTGDDLVRWCRERLAHFKAPRHVTL 518
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKTATGKIQKFVLRE
Sbjct: 519 -TELPKTATGKIQKFVLRE 536
>gi|26989514|ref|NP_744939.1| acyl-CoA synthetase [Pseudomonas putida KT2440]
gi|24984387|gb|AAN68403.1|AE016473_1 AMP-binding domain protein [Pseudomonas putida KT2440]
Length = 548
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/439 (41%), Positives = 267/439 (60%), Gaps = 17/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL+ + ++ +L H +K+L D + +A AL++ + +L V I DD + +
Sbjct: 103 RLEGRSIAFILRHCAAKVLICDREFGAVANQALAMLDAPPLL---VGIDDDQAERADLAH 159
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P P++EW +A+NYTSGTT PKGVV HRG ++ + + +
Sbjct: 160 DLDYEAFLAQGDPARPLSAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIF 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + V+LWTLPMFH NGWS++W + GGT++CLRKV I + I H VTH+ A
Sbjct: 220 QLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPDAINAAIAEHAVTHLSAAP 279
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
VV++ML + PV ++T GA+PP+AV+ E+ GF ++H+YG+TE+ G C
Sbjct: 280 VVMSMLIHAEHASAPPVPVSVITGGAAPPSAVIAAMEARGFNITHAYGMTESYGPSTLCL 339
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ + L RA+ +RQGV L + V+ +TG V DG + GE+V R ++M
Sbjct: 340 WQPGVDELPLEARAQFMSRQGVAHPLLEEATVLDTDTGRPVPADGLTLGELVVRGNTVMK 399
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYL + E + + N W +TGD+ V+H DGY+EIKDR+KD+IISGGENISS E+E VLY
Sbjct: 400 GYLHNPEATRAALA-NGWLHTGDLAVLHLDGYVEIKDRAKDIIISGGENISSLEIEEVLY 458
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + E A+VA+ D WG+ P AFV+L+ + + + ++ +CR RL H+ A + V +
Sbjct: 459 QHPEVVEAAVVARPDSRWGETPHAFVTLRAD--ALASGDDLVRWCRERLAHFKAPRHVSL 516
Query: 415 EDELPKTATGKIQKFVLRE 433
D LPKTATGKIQKFVLRE
Sbjct: 517 VD-LPKTATGKIQKFVLRE 534
>gi|116050159|ref|YP_791024.1| acyl-CoA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
gi|115585380|gb|ABJ11395.1| Putative Acyl-CoA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 548
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 181/439 (41%), Positives = 270/439 (61%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL+ + ++ +L H +++L D + +A AL++ + +L V I DD + +
Sbjct: 102 RLEARSIAFILRHCAARVLICDREFGAVAQQALAMLDAPPLL---VGIDDDQAERADLAH 158
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P P++EW +A+NYTSGTT PKGVV HRG ++ + + +
Sbjct: 159 DLDYEAFLAQGDPGRPLSAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIF 218
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + V+LWTLPMFH NGWS++W + GGT++CLRKV I++ I H VTH+ A
Sbjct: 219 QLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAP 278
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
VV++ML + PV ++T GA+PP+AV+ E+ GF ++H+YG+TE+ G C
Sbjct: 279 VVMSMLIHAEHASVPAVPVSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCL 338
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ + L RA+ +RQGV L + V+ +TG V DG++ GE+V R ++M
Sbjct: 339 WQPGVDELPLEARAQFMSRQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMK 398
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYL + E + + D W +TGD+ V+H DGY+EIKDR+KD+IISGGENISS E+E VLY
Sbjct: 399 GYLHNPEATRAALADG-WLHTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLY 457
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + E A+VA+ D WG+ P AFV+L+ + + T + ++ +CR RL H+ A + V +
Sbjct: 458 QHPEVVEAAVVARPDSRWGETPHAFVALRADALPRTTGDDLVRWCRERLAHFKAPRHVTL 517
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKTATGKIQKFVLRE
Sbjct: 518 -TELPKTATGKIQKFVLRE 535
>gi|421156118|ref|ZP_15615571.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 14886]
gi|421180667|ref|ZP_15638215.1| acyl-CoA synthetase [Pseudomonas aeruginosa E2]
gi|424941457|ref|ZP_18357220.1| putative Acyl-CoA synthetase [Pseudomonas aeruginosa NCMG1179]
gi|451986317|ref|ZP_21934505.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas aeruginosa 18A]
gi|187939977|gb|ACD39112.1| AMP-dependent synthetase and ligase family protein [Pseudomonas
aeruginosa]
gi|346057903|dbj|GAA17786.1| putative Acyl-CoA synthetase [Pseudomonas aeruginosa NCMG1179]
gi|404519413|gb|EKA30170.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 14886]
gi|404545109|gb|EKA54218.1| acyl-CoA synthetase [Pseudomonas aeruginosa E2]
gi|451756033|emb|CCQ87028.1| Long-chain-fatty-acid--CoA ligase [Pseudomonas aeruginosa 18A]
Length = 549
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/439 (41%), Positives = 270/439 (61%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL+ + ++ +L H +++L D + +A AL++ + +L V I DD + +
Sbjct: 103 RLEARSIAFILRHCAARVLICDREFGAVAQQALAMLDAPPLL---VGIDDDQAERADLAH 159
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P P++EW +A+NYTSGTT PKGVV HRG ++ + + +
Sbjct: 160 DLDYEAFLAQGDPGRPLSAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIF 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + V+LWTLPMFH NGWS++W + GGT++CLRKV I++ I H VTH+ A
Sbjct: 220 QLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAP 279
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
VV++ML + PV ++T GA+PP+AV+ E+ GF ++H+YG+TE+ G C
Sbjct: 280 VVMSMLIHAEHASVPAVPVSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCL 339
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ + L RA+ +RQGV L + V+ +TG V DG++ GE+V R ++M
Sbjct: 340 WQPGVDELPLEARAQFMSRQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMK 399
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYL + E + + D W +TGD+ V+H DGY+EIKDR+KD+IISGGENISS E+E VLY
Sbjct: 400 GYLHNPEATRAALADG-WLHTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLY 458
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + E A+VA+ D WG+ P AFV+L+ + + T + ++ +CR RL H+ A + V +
Sbjct: 459 QHPEVVEAAVVARPDSRWGETPHAFVALRADALPRTTGDDLVRWCRERLAHFKAPRHVTL 518
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKTATGKIQKFVLRE
Sbjct: 519 -TELPKTATGKIQKFVLRE 536
>gi|12698386|gb|AAK01500.1| AMP-binding protein domain [Pseudomonas aeruginosa]
Length = 563
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/439 (41%), Positives = 270/439 (61%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL+ + ++ +L H +++L D + +A AL++ + +L V I DD + +
Sbjct: 117 RLEARSIAFILRHCAARVLICDREFGAVAQQALAMLDAPPLL---VGIDDDQAERADLAH 173
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P P++EW +A+NYTSGTT PKGVV HRG ++ + + +
Sbjct: 174 DLDYEAFLAQGDPGRPLSAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIF 233
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + V+LWTLPMFH NGWS++W + GGT++CLRKV I++ I H VTH+ A
Sbjct: 234 QLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAP 293
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
VV++ML + PV ++T GA+PP+AV+ E+ GF ++H+YG+TE+ G C
Sbjct: 294 VVMSMLIHAEHASVPAVPVSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCL 353
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ + L RA+ +RQGV L + V+ +TG V DG++ GE+V R ++M
Sbjct: 354 WQPGVDELPLEARAQFMSRQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMK 413
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYL + E + + D W +TGD+ V+H DGY+EIKDR+KD+IISGGENISS E+E VLY
Sbjct: 414 GYLHNPEATRAALADG-WLHTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLY 472
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + E A+VA+ D WG+ P AFV+L+ + + T + ++ +CR RL H+ A + V +
Sbjct: 473 QHPEVVEAAVVARPDSRWGETPHAFVALRADALPRTTGDDLVRWCRERLAHFKAPRHVTL 532
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKTATGKIQKFVLRE
Sbjct: 533 -TELPKTATGKIQKFVLRE 550
>gi|402848933|ref|ZP_10897179.1| putative AMP-binding protein [Rhodovulum sp. PH10]
gi|402500809|gb|EJW12475.1| putative AMP-binding protein [Rhodovulum sp. PH10]
Length = 546
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 184/447 (41%), Positives = 280/447 (62%), Gaps = 24/447 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-HDDVS-ATSSP 62
RLD ++ L H E+K++ D + + + AL + KP++I +DD +
Sbjct: 103 RLDAAIIAFSLDHGEAKVVITDREFAKVMGPAL-----DKAAVKPLVIDYDDPEFSGEGE 157
Query: 63 TVGHPNFKWVQPE-----------SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
+G +++ E EWD ++LNYTSGTT +PKGVV+ HRG ++ +S++
Sbjct: 158 RLGDLDYEAFLAEGDESFARRLEIDEWDAISLNYTSGTTGNPKGVVYHHRGAWLTAMSNV 217
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
++ + PV+LWTLPMFH NGW + W ++ V GT++CLR+V +Y ++ HGVTH+C
Sbjct: 218 VNCAMGKHPVYLWTLPMFHCNGWCFPWSISIVAGTHVCLRQVRAKTMYELMAAHGVTHLC 277
Query: 172 GALVVL-NMLSSSPST-KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V+ +L+++P+ KPLD V+ T+ A PP +VL+ + GF V+H YGLTET G
Sbjct: 278 GAPIVMATLLNAAPADRKPLDGVVQFFTAAAPPPESVLVAMKEAGFEVTHLYGLTETYGP 337
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
W +W+ L+ E+ +KARQGV L D+ V T V DGQ+ GE++FR
Sbjct: 338 SAINDWHREWDDLSAAEQGIMKARQGVPYTCLDDLAVKDAATMEDVPADGQTLGEVMFRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+++ + WF++GD+GV+H DGY+++KDR+KD+IISGGENISS EV
Sbjct: 398 NVVMRGYLKNKKATDDAFA-GGWFHSGDLGVMHPDGYIQLKDRAKDIIISGGENISSIEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA+ VA+VA+ D+ WG+ PCAFV L+ ++ +EE ++++CR L +
Sbjct: 457 EDALYKHPAVQAVAVVAKPDEKWGETPCAFVELR--EGQQASEEDLLDWCREHLARFKCP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVN 436
+ VI E+PKT+TGKIQK+ LRE+
Sbjct: 515 RQVIFT-EIPKTSTGKIQKYKLREMAK 540
>gi|393757715|ref|ZP_10346539.1| o-succinylbenzoate--CoA ligase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
gi|393165407|gb|EJC65456.1| o-succinylbenzoate--CoA ligase [Alcaligenes faecalis subsp.
faecalis NCIB 8687]
Length = 550
Score = 338 bits (868), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 193/455 (42%), Positives = 269/455 (59%), Gaps = 34/455 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDV-------- 56
RLD ++ +L H E++ + VD + + + ALSL S P+L+ D V
Sbjct: 106 RLDASTIAYMLDHGEARAVLVDSEFAAVMKEALSLRESKA----PILVIDVVDPYFDQGA 161
Query: 57 ----SATSSPTV--GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
S T V G P++ W P +EWD +ALNYTSGTT PKGVV+ HRG ++ +S+
Sbjct: 162 EGIGSQTYEAFVDGGDPDYDWQLPANEWDAIALNYTSGTTGKPKGVVYHHRGAYLGALSN 221
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW++ W +AA G N+CLRKV+ + + +GVTH
Sbjct: 222 VLEWDMPKHAVYLWTLPMFHCNGWTFPWVIAARAGVNVCLRKVEAQAMVDNMVDYGVTHY 281
Query: 171 CGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V ++L ++ T L + V + +GA+PPA ++ E +GF ++H YGLTET G
Sbjct: 282 CGAPIVHSLLVNADETLKSRLPKGVSAMVAGAAPPATMIEGMERMGFALTHVYGLTETYG 341
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA + WN L ERA+ ARQGVR + V+ P+T V DGQ+ GEI+FR
Sbjct: 342 PASVCAQHAPWNELGIQERAQRNARQGVRYHLQGAVKVLDPQTMQPVPADGQTMGEIMFR 401
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ E + + WF+TGD+ V DGY+ IKDRSKD+IISGGENISS E
Sbjct: 402 GNITMKGYLKNPEATQESL-GAGWFHTGDLAVCEPDGYVRIKDRSKDIIISGGENISSIE 460
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRA-----RL 403
+E V+Y +PA+ A+VAQ D+ WG+ P +V L+ + T E + CR ++
Sbjct: 461 IEDVMYRHPAVQAAAVVAQPDERWGEAPHVYVELR--PGAQVTVEELRAHCRQHLAGFKI 518
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
P Y + ELPKTATGKIQKF LR+ V
Sbjct: 519 PRYFSFM------ELPKTATGKIQKFALRQQAKQV 547
>gi|421167900|ref|ZP_15626035.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 700888]
gi|404532540|gb|EKA42419.1| acyl-CoA synthetase [Pseudomonas aeruginosa ATCC 700888]
Length = 549
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 181/439 (41%), Positives = 270/439 (61%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL+ + ++ +L H +++L D + +A AL++ + +L V I DD + +
Sbjct: 103 RLEARSIAFILRHCAARVLICDREFGAVAQQALAMLDAPPLL---VGIDDDQAERADLAH 159
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P P++EW +A+NYTSGTT PKGVV HRG ++ + + +
Sbjct: 160 DLDYKAFLAQGDPGRPLSAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIF 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + V+LWTLPMFH NGWS++W + GGT++CLRKV I++ I H VTH+ A
Sbjct: 220 QLGPRSVYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAP 279
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
VV++ML + PV ++T GA+PP+AV+ E+ GF ++H+YG+TE+ G C
Sbjct: 280 VVMSMLIHAEHASVPAVPVSVITGGAAPPSAVIAAMEARGFRITHAYGMTESYGPSTLCL 339
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ + L RA+ +RQGV L + V+ +TG V DG++ GE+V R ++M
Sbjct: 340 WQPGVDELPLEARAQFMSRQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMK 399
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYL + E + + D W +TGD+ V+H DGY+EIKDR+KD+IISGGENISS E+E VLY
Sbjct: 400 GYLHNPEATRAALADG-WLHTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLY 458
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + E A+VA+ D WG+ P AFV+L+ + + T + ++ +CR RL H+ A + V +
Sbjct: 459 QHPEVVEAAVVARPDSRWGETPHAFVALRADALPRTTGDDLVRWCRERLAHFKAPRHVTL 518
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKTATGKIQKFVLRE
Sbjct: 519 -TELPKTATGKIQKFVLRE 536
>gi|56479161|ref|YP_160750.1| acyl-CoA synthetase [Aromatoleum aromaticum EbN1]
gi|56315204|emb|CAI09849.1| probable CoA ligase (AMP-forming) [Aromatoleum aromaticum EbN1]
Length = 550
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 192/444 (43%), Positives = 270/444 (60%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL+ + V+ +L+H+E+K+L D + + + A+ L P ++I D S P
Sbjct: 106 RLEPETVAFMLNHAEAKVLITDREFARVMAKAIEL----ANRPDLIVIDVDDPEYSGPGD 161
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P+F + QP EWD ++LNYTSGTT +PKGVV+ HRG ++ +S++
Sbjct: 162 RVGTLEYEALLETGSPDFAFEQPADEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAMSNI 221
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W +P V+LWTLPMFH NGW ++W MAA GTN+CLR+VD +I+ I+ HGVTH C
Sbjct: 222 VSWGMPPHSVYLWTLPMFHCNGWCFAWTMAANAGTNVCLRRVDPRLIFEAIREHGVTHYC 281
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
GA +V +ML+++P + + +D + L + A PPAAV+ +G ++H YGLTET G
Sbjct: 282 GAPIVHSMLANAPESWREGIDHKMYGLVAAAPPPAAVIEGMAKIGIDLTHVYGLTETYGP 341
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
CA +W L E+ L RQGVR + V+ P+T V D Q+ GEI+FR
Sbjct: 342 AAVCAKHDEWKDLPLAEQIALNGRQGVRYHAQEGITVLDPQTMEPVPWDNQTMGEIMFRG 401
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + + R W++TGD+ V+ +DGY++IKDRSKDVIISGGENISS EV
Sbjct: 402 NLVMKGYLKNPDATEESFR-GGWYHTGDLAVMQADGYVKIKDRSKDVIISGGENISSIEV 460
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA+ A+VA D WG+ P AFV L+ TE ++ CR L + +
Sbjct: 461 EDALYKHPAVMAAAVVALPDPKWGEVPAAFVELR--EGTTVTEAELVAHCREHLAGFKSP 518
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K +I LPKT+TGKIQKFVLRE
Sbjct: 519 KKIIF-GPLPKTSTGKIQKFVLRE 541
>gi|218891821|ref|YP_002440688.1| acyl-CoA synthetase [Pseudomonas aeruginosa LESB58]
gi|218772047|emb|CAW27826.1| Putative Acyl-CoA synthetase [Pseudomonas aeruginosa LESB58]
gi|453043443|gb|EME91174.1| acyl-CoA synthetase [Pseudomonas aeruginosa PA21_ST175]
Length = 549
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 180/439 (41%), Positives = 270/439 (61%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL+ + ++ +L H +++L D + +A AL++ + +L V I DD + +
Sbjct: 103 RLEARSIAFILRHCAARVLICDREFGAVAQQALAMLDAPPLL---VGIDDDQAERADLAH 159
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P P++EW +A+NYTSGTT PKGVV HRG ++ + + +
Sbjct: 160 DLDYEAFLAQGDPGRPLSAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIF 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + ++LWTLPMFH NGWS++W + GGT++CLRKV I++ I H VTH+ A
Sbjct: 220 QLGPRSIYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAP 279
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
VV++ML + PV ++T GA+PP+AV+ E+ GF ++H+YG+TE+ G C
Sbjct: 280 VVMSMLIHAEHASVPAVPVSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCL 339
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ + L RA+ +RQGV L + V+ +TG V DG++ GE+V R ++M
Sbjct: 340 WQPGVDELPLEARAQFMSRQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMK 399
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYL + E + + D W +TGD+ V+H DGY+EIKDR+KD+IISGGENISS E+E VLY
Sbjct: 400 GYLHNPEATRAALADG-WLHTGDLAVLHPDGYVEIKDRAKDIIISGGENISSLEIEEVLY 458
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + E A+VA+ D WG+ P AFV+L+ + + T + ++ +CR RL H+ A + V +
Sbjct: 459 QHPEVVEAAVVARPDSRWGETPHAFVALRADALPRTTGDDLVRWCRERLAHFKAPRHVTL 518
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKTATGKIQKFVLRE
Sbjct: 519 -TELPKTATGKIQKFVLRE 536
>gi|424778877|ref|ZP_18205815.1| o-succinylbenzoate--CoA ligase [Alcaligenes sp. HPC1271]
gi|422886306|gb|EKU28730.1| o-succinylbenzoate--CoA ligase [Alcaligenes sp. HPC1271]
Length = 550
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 192/451 (42%), Positives = 270/451 (59%), Gaps = 36/451 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDV-------- 56
RLD ++ +L H E++ + VD + + + ALSL S +P+L+ D V
Sbjct: 106 RLDASTIAYMLDHGEARAVLVDSEFAAVMKEALSLRESK----EPILVIDVVDNYFDTGA 161
Query: 57 ----SATSSPTV--GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
S T V G P++ W P +EWD +ALNYTSGTT PKGVV+ HRG ++ +S+
Sbjct: 162 ERIGSQTYEEFVDGGDPDYDWQLPANEWDAIALNYTSGTTGKPKGVVYHHRGAYLGALSN 221
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++W +P V+LWTLPMFH NGW++ W +AA G N+CLRKV+ + + +GVTH
Sbjct: 222 VLEWDMPKHAVYLWTLPMFHCNGWTFPWVIAARAGVNVCLRKVEAQAMVDNMVDYGVTHY 281
Query: 171 CGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
CGA +V ++L +S L + V + +GA+PPA ++ E +GF ++H YGLTET G
Sbjct: 282 CGAPIVHSLLVNSDEALKSRLPKGVSAMVAGAAPPATMIEGMERMGFALTHVYGLTETYG 341
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
CA + W+ L ERA+ ARQGVR + V++P+T V DG++ GEI+FR
Sbjct: 342 PASVCAQHAPWSELDIQERAQRNARQGVRYHLQGGVQVLNPQTMEPVPADGETMGEIMFR 401
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
M GYLK+ + + + WF+TGD+ V DGY+ IKDRSKD+IISGGENISS E
Sbjct: 402 GNITMKGYLKNAQATQESL-GGGWFHTGDLAVCEPDGYVRIKDRSKDIIISGGENISSIE 460
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
+E V+Y +PA+ A+VAQ D+ WG+ P +V L +P E +E RA Y+A
Sbjct: 461 IEDVMYRHPAVQAAAVVAQPDERWGEAPHVYVEL------RPGAEVTVEELRAHCRQYLA 514
Query: 409 ------HKSVIIEDELPKTATGKIQKFVLRE 433
H S + ELPKTATGKIQKF LR+
Sbjct: 515 GFKIPRHFSFM---ELPKTATGKIQKFALRQ 542
>gi|416988389|ref|ZP_11938604.1| acyl-CoA synthetase [Burkholderia sp. TJI49]
gi|325518846|gb|EGC98417.1| acyl-CoA synthetase [Burkholderia sp. TJI49]
Length = 550
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 263/442 (59%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V +L H E+K+L VD + + LA A P I+ + D + T
Sbjct: 102 RLDIASVLFMLRHGEAKVLIVDTEYAALAHRAALEVPGLKIVSVADAMPADPACFGGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P++ W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFLAGGDPDYAWTPPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ ++ V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAELRAGIEHKVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W+ L+D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWDELSDDERARLNARQGVRYHLEAGATVLDPDTMTQVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+ V+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFH-GGWFHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TE I+ CR L + K V+
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELREGASA--TEAEIVAHCRQLLAGFKVPK-VVRF 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRNAVGS 539
>gi|418054249|ref|ZP_12692305.1| o-succinylbenzoate--CoA ligase [Hyphomicrobium denitrificans 1NES1]
gi|353211874|gb|EHB77274.1| o-succinylbenzoate--CoA ligase [Hyphomicrobium denitrificans 1NES1]
Length = 541
Score = 337 bits (865), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 267/442 (60%), Gaps = 14/442 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-----PKPVLIHDDVSAT 59
RLD V+ L H+ +KLL D + S AAL+L I+ P+ + +SA
Sbjct: 102 RLDAAVVAFQLDHAGTKLLITDREFSATVKAALALAKIQPIVIDYDDPEFPQTGEALSAE 161
Query: 60 SSPTV---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
G PNF W PE EW+ ++LNYTSGTT +PKGVV+ HRG ++ ++ I +
Sbjct: 162 DYEAFVSGGDPNFDWRWPEDEWEAISLNYTSGTTGNPKGVVYHHRGAALMCYANTISTGM 221
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
PV+LWTLPMFH NGW + W + GT++CLR V +Y I H VTH+ GA +V
Sbjct: 222 TRFPVYLWTLPMFHCNGWCFPWSVTLAQGTHVCLRWVRAKAMYDAIVDHKVTHLSGAPIV 281
Query: 177 L-NMLSSSPSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
+ +L+++P K P+ V + A PPAAV+ GF ++H YGLTET G
Sbjct: 282 MATLLNAAPDEKRPISHVVAFNHAAAPPPAAVIAAMTDAGFELTHLYGLTETYGPATINE 341
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W WN L+ ER+ + RQG+R + L + V+ PET V DG++ GE++FR +M
Sbjct: 342 WDPSWNDLSAPERSAKRIRQGIRYVALEGLTVMDPETMTEVPADGETLGEVMFRGNIVMK 401
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+++ + WF++GD+GV+H DGY+++KDRSKD+IISGGENISS EVE VLY
Sbjct: 402 GYLKNEKATEEAFA-GGWFHSGDLGVLHPDGYIQLKDRSKDIIISGGENISSIEVEEVLY 460
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P++ A+VA+ D+ WG+ PCAF+ L+ S TE I+E+CR L Y + V+
Sbjct: 461 KHPSVAFCAVVAKPDEKWGETPCAFIELRAGASA--TEAEILEWCRQGLARYKVPRHVVF 518
Query: 415 EDELPKTATGKIQKFVLREIVN 436
E+PKT+TGKIQKF LRE+
Sbjct: 519 A-EVPKTSTGKIQKFKLREMAK 539
>gi|421485935|ref|ZP_15933487.1| acyl-CoA synthetase [Achromobacter piechaudii HLE]
gi|400195716|gb|EJO28700.1| acyl-CoA synthetase [Achromobacter piechaudii HLE]
Length = 563
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 196/446 (43%), Positives = 267/446 (59%), Gaps = 20/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD-DVSATSSPT 63
RLD V +L H E++ L VD + +A A + FP I V +HD D + + P
Sbjct: 102 RLDTPSVLFMLGHGEARALIVDTEYGDVAQRARAEFPHLKI----VSVHDLDSAPATLPG 157
Query: 64 V---------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
++ W P EWD +ALNYTSGTT PKGVV+ +RG ++ VS++++W
Sbjct: 158 ATDYEAFLADAPAHYDWKPPADEWDAIALNYTSGTTGDPKGVVYHYRGAYMNAVSNILEW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ GVTH CGA
Sbjct: 218 DMPKHAVYLWTLPMFHCNGWCFPWTVAARAGVNVCLRKFDPKTVFDLIRDEGVTHYCGAP 277
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+V + L+++P+ + V+ + +GA+P AV+ + +GF ++H YGLTE G
Sbjct: 278 IVQSALANAPAEMRAGITHTVRTMVAGAAPAPAVIAKMRDIGFELTHVYGLTEVYGPAAV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA + W+ L D RA L ARQGVR A + V +P+T V D Q+ GEI+FR
Sbjct: 338 CARQESWDALDDERRALLTARQGVRYHLQAGISVRNPDTMEEVPADEQTVGEIMFRGNIC 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK++ + WF+TGD+GV+ +DGY+ IKDRSKD+IISGGENISS EVE
Sbjct: 398 MKGYLKNERATEEAFA-GGWFHTGDLGVMTADGYVRIKDRSKDIIISGGENISSIEVEDA 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ VA+VA D WG+ PCAFV LK + T E II C+ LP + ++V
Sbjct: 457 LYRHPAVAAVAVVAMPDPKWGETPCAFVELKAGCTA--TAEEIIAHCKLLLPGFKVPRAV 514
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
ELPKT+TGKIQKF LR V A
Sbjct: 515 RF-GELPKTSTGKIQKFELRAAVGAT 539
>gi|206563275|ref|YP_002234038.1| acyl-CoA synthetase [Burkholderia cenocepacia J2315]
gi|198039315|emb|CAR55280.1| putative AMP-binding enzyme [Burkholderia cenocepacia J2315]
Length = 550
Score = 337 bits (865), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 264/442 (59%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD----VSATS 60
RLD V +L H E+K+L VD + + +A A P I+ + D AT
Sbjct: 102 RLDVSSVLFMLRHGEAKVLIVDTEYAEVAQRAALEVPGLKIVSVADALPADPDRFAGATD 161
Query: 61 SPTV---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
T G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YETFVAGGDPDYAWTPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D + +I+ +TH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVLDLIRRERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAEFRAGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+S W+ ++D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QSHWDAVSDEERARLNARQGVRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+ V+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPKATDEAFH-GGWFHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TE I+ CR L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELREGASA--TEAEIVAHCRQLLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRHAVGS 539
>gi|126733247|ref|ZP_01748994.1| AMP-dependent synthetase and ligase [Roseobacter sp. CCS2]
gi|126716113|gb|EBA12977.1| AMP-dependent synthetase and ligase [Roseobacter sp. CCS2]
Length = 541
Score = 337 bits (864), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 190/443 (42%), Positives = 259/443 (58%), Gaps = 23/443 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH--DDVSATSSP 62
RLD V+ + H E+K+ VD Q PLA+AA+ L P P++I DD + +
Sbjct: 103 RLDIDTVAYIFDHGEAKVALVDSQFLPLAMAAIELMEG----PAPLIIEVPDDQAGVHAM 158
Query: 63 T----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F W+ PE EW+ +ALNYTSGTT PKGVV+ HRG +++T+ + I
Sbjct: 159 AEQQNYEDFLATGDPEFAWILPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTPI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P +L +P+FH NGW+++W M A+GGT +C R + +Y I GVTH G
Sbjct: 219 SWELPLFMRYLQIVPLFHCNGWNHTWMMPALGGTVVCCRDISAKAVYDAIGDEGVTHFGG 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN++ + + D V++ T+GA P A L LGF V YGLTET G V
Sbjct: 279 APIVLNLIVNAKDEDRRAFDHVVEVFTAGAPPAPATLAAIGKLGFNVKQVYGLTETYGHV 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C W S W++L + E+A +KARQGV + D+ VV G V DG +QGEIV R
Sbjct: 339 TECIWDSDWDSLPEDEQAAIKARQGVAFPMMEDVTVVDTYMG-QVPRDGATQGEIVMRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYLK+ E + +F++ D+ + H G ++I DR+KD+IISGGENISS EVE
Sbjct: 398 AVMKGYLKNAEATDKAFA-GGYFHSEDLAIQHQGGSIQISDRAKDIIISGGENISSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
L + A+N A+VAQ D WG+ PCAFV LK + E II F R RL + K
Sbjct: 457 GALMHHAAVNLCAVVAQPDDKWGEVPCAFVELKDGATADEAE--IIAFTRERLAGFKCPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V+ + ELPKT+TGKIQKF LR+
Sbjct: 515 KVVFQ-ELPKTSTGKIQKFELRK 536
>gi|444356174|ref|ZP_21157875.1| long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia BC7]
gi|444368565|ref|ZP_21168404.1| long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia
K56-2Valvano]
gi|443600680|gb|ELT68857.1| long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia
K56-2Valvano]
gi|443607535|gb|ELT75224.1| long-chain-fatty-acid--CoA ligase [Burkholderia cenocepacia BC7]
Length = 647
Score = 337 bits (864), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 192/442 (43%), Positives = 264/442 (59%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD----VSATS 60
RLD V +L H E+K+L VD + + +A A P I+ + D AT
Sbjct: 199 RLDVSSVLFMLRHGEAKVLIVDTEYAEVAQRAALEVPGLKIVSVADALPADPDRFAGATD 258
Query: 61 SPTV---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
T G P++ W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 259 YETFVAGGDPDYAWTPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 318
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D + +I+ +TH CGA +V
Sbjct: 319 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVLDLIRRERITHYCGAPIVQ 378
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 379 SAIANAPAEFRAGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 438
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+S W+ ++D ERARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 439 QSHWDAVSDEERARLNARQGVRYHLEAGATVLDPDTMTPVPADGETLGEIMFRGNICMKG 498
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+ V+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 499 YLKNPKATDEAFH-GGWFHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYR 557
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TE I+ CR L + K+V
Sbjct: 558 HPAVAVAAVVAMPDPKWGEVPCAFVELREGASA--TEAEIVAHCRQLLAGFKVPKAVRF- 614
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 615 GELPKTSTGKIQKFQLRHAVGS 636
>gi|78062574|ref|YP_372482.1| acyl-CoA synthetase [Burkholderia sp. 383]
gi|77970459|gb|ABB11838.1| AMP-dependent synthetase and ligase [Burkholderia sp. 383]
Length = 556
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 264/442 (59%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V +L H E+K+L VD + + A A P I+ + D + + T
Sbjct: 102 RLDVSSVLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLKIVSVADAMPADPARFAGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEALVASGDAGYAWTPPADEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ +TH CGA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKTVFDLIRRERITHYCGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + +D V + +GA+P AV+ + + +GF + H YGLTE G CA
Sbjct: 282 SAIANAPAEFREGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+S W L+D +RARL ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QSHWEELSDEDRARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + + WF+TGD+ V+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPKATDEAFH-GGWFHTGDLAVLMPDGYIRIKDRKKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ S TEE I+ C+A L + K+V
Sbjct: 461 HPAVAVAAVVAMPDPKWGEVPCAFVELREGASV--TEEEIVAHCKALLAGFKVPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRNAVGS 539
>gi|85703679|ref|ZP_01034783.1| AMP-binding protein [Roseovarius sp. 217]
gi|85672607|gb|EAQ27464.1| AMP-binding protein [Roseovarius sp. 217]
Length = 542
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 187/446 (41%), Positives = 263/446 (58%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL+ ++ +L H ++++ D Q P A+ L P V + DD + +
Sbjct: 103 RLEADTIAYILDHGGARVVLCDPQFLPTLAQAIDLMEGPP--PGVVEVADDAAGVHAHGH 160
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P+F W+ PE EW+ +ALNYTSGTT PKGVV+ HRG +++T+ +++ W
Sbjct: 161 YMEYEELLASGDPDFPWIMPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVSW 220
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P P +L +P+FH N W++ W M +G T +C R + IY I GVTH GA
Sbjct: 221 DLPRYPTYLTIVPLFHCNNWNHVWLMPMLGATLVCCRDITAKAIYDAIADEGVTHFGGAP 280
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLNM+ ++ + + D V + T+GA PPAA L E LGF V+ YGLTET G V
Sbjct: 281 IVLNMIVNAKDSERRRFDHIVDVFTAGAPPPAATLAAIEPLGFKVTQVYGLTETYGHVTE 340
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C W+ W+ L D ER +KAR GV + D+ + PET + DG+S GEI+ R S+
Sbjct: 341 CLWQEAWDDLPDDERYSIKARTGVLMPMMEDITAMDPETMTQIPMDGESLGEIMIRGNSV 400
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + +F++GDI H DGYL+I DR+KD+IISGGENISS EVE V
Sbjct: 401 MKGYLKNPAATEEAFH-GGYFHSGDIAFQHPDGYLKIADRAKDIIISGGENISSVEVEGV 459
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L +PA+ A+VA+ D+ WG+ PCAFV LK ++ +E +I F R RL + K+V
Sbjct: 460 LMRHPAVMLCAVVAKPDEKWGEVPCAFVELKDGVTV--SEAELIAFARERLASFKTPKAV 517
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ + ELPKTATGKIQKF LR+ A+
Sbjct: 518 VFQ-ELPKTATGKIQKFELRQSARAL 542
>gi|149201948|ref|ZP_01878922.1| AMP-dependent synthetase and ligase [Roseovarius sp. TM1035]
gi|149144996|gb|EDM33025.1| AMP-dependent synthetase and ligase [Roseovarius sp. TM1035]
Length = 542
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 184/446 (41%), Positives = 263/446 (58%), Gaps = 18/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL+ ++ +L H ++++ D Q P+ A+ L P V + DD + +
Sbjct: 103 RLEADTIAYILDHGGARVVLCDPQFLPVLAQAIELMEGPP--PGVVEVADDAAGVHAHGH 160
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P+F W+ PE EW+ +ALNYTSGTT PKGVV+ HRG +++T+ +++ W
Sbjct: 161 YMEYEELLASGDPDFAWIMPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVVSW 220
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++P P +L +P+FH N W++ W M +GG +C R + IY I GVTH GA
Sbjct: 221 QLPRYPTYLTIVPLFHCNNWNHVWLMPMLGGRVVCCRDITARAIYDAIADEGVTHFGGAP 280
Query: 175 VVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLNM+ + + D V + T+GA PPAA L E LGF V+ YGLTET G V
Sbjct: 281 IVLNMIVHAKEGERRAFDHVVDVFTAGAPPPAATLAAIEPLGFTVTQVYGLTETYGHVTE 340
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C W+ W+ L + ER +KAR GV + ++ + PET + DG + GEI+ R S+
Sbjct: 341 CLWQDGWDALPEDERYTIKARTGVLMPMMEEITAMDPETMAQIPMDGATLGEIMIRGNSV 400
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ ++ R +F++GDI H DGYL+I DR+KD+IISGGENISS EVE V
Sbjct: 401 MKGYLKNPAATAEAFR-GGYFHSGDIAFQHPDGYLKIADRAKDIIISGGENISSVEVEGV 459
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L +PA+ A+VA+ D+ WG+ PCAFV LK + +E +I F R RL + K+V
Sbjct: 460 LMRHPAVMLCAVVAKPDEKWGEVPCAFVELK--DGAEVSEAELIAFARERLAGFKTPKAV 517
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ + ELPKT+TGKIQKF LR+ A+
Sbjct: 518 VFQ-ELPKTSTGKIQKFELRQSARAL 542
>gi|372489423|ref|YP_005028988.1| acyl-CoA synthetase [Dechlorosoma suillum PS]
gi|359355976|gb|AEV27147.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Dechlorosoma
suillum PS]
Length = 552
Score = 335 bits (859), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 192/445 (43%), Positives = 274/445 (61%), Gaps = 18/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL----------PKPVLIHD 54
RLD + V+ +L+H E+K+L D + S + AL + ++ P +L
Sbjct: 109 RLDPEAVAFMLNHGEAKILITDKEYSHIVGPALEKLGRSIVVIDVNDSEYTGPGDLLGEK 168
Query: 55 DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
D A + G P+++W P+ EWD ++LNYTSGTT +PKGVV+ HRG ++ +S+++ W
Sbjct: 169 DYEALLAE--GTPDYEWKGPQDEWDAISLNYTSGTTGNPKGVVYHHRGAYLNAMSNIVSW 226
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+P V+LWTLPMFH NGW + W MAA GTN+CLR+VD +I I+ + VTH CGA
Sbjct: 227 GMPPHSVYLWTLPMFHCNGWCFPWTMAANAGTNVCLRRVDPKLILQSIRENKVTHYCGAP 286
Query: 175 VVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+V +ML+++P+ + ++ V L + A PPAAV+ +GF ++H YGLTET G
Sbjct: 287 IVHSMLANAPAEWREGINHGVSGLIAAAPPPAAVIEGMAKIGFKITHVYGLTETYGPASV 346
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CA + +W L E+ L RQGVR + V+ P T +V D ++ GEI+FR +
Sbjct: 347 CAQQPEWFDLPVGEQVNLNGRQGVRYHAQEAITVLDPATMEAVPWDNETMGEIMFRGNLV 406
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + + +++TGD+ V+ +DGY++IKDRSKDVIISGGENISS EVE
Sbjct: 407 MKGYLKNPKATEESFA-GGYYHTGDLAVMQADGYVKIKDRSKDVIISGGENISSIEVEDT 465
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PA+ A+VA D WG+ P AF+ LK +S TE IIEFCR + + K V
Sbjct: 466 LYRHPAVMAAAVVATPDPKWGEVPAAFIELKDGVSI--TEVEIIEFCREHMARFKVPKKV 523
Query: 413 IIEDELPKTATGKIQKFVLREIVNA 437
I LPKT+TGKIQK+VLRE+ +
Sbjct: 524 IF-GPLPKTSTGKIQKYVLREMAKS 547
>gi|167588445|ref|ZP_02380833.1| acyl-CoA synthetase [Burkholderia ubonensis Bu]
Length = 551
Score = 335 bits (858), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 191/446 (42%), Positives = 267/446 (59%), Gaps = 21/446 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD V +L H E+K+L VD + + LA A P I V + D + A +
Sbjct: 102 RLDISSVLFMLRHGEAKVLIVDTEYAELAHRAALDIPGLKI----VSVADAMPADPARFA 157
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +++ W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++
Sbjct: 158 GATDYEAFVAGGDAEHAWTLPADEWDAIALNYTSGTTGDPKGVVYHHRGAYLAALSNILE 217
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P V+LWTLP+FH NGW + W +AA G N+CLR+ D ++ +I+ VTH CGA
Sbjct: 218 WDMPKHAVYLWTLPLFHCNGWCFPWAIAARAGVNVCLRRFDAKTVFDLIRRERVTHYCGA 277
Query: 174 LVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+V + ++++P+ + +D V + +GA+P AV+ + + +GF + H YGLTE G
Sbjct: 278 PIVQSAIANAPAEWREGIDHTVHAMVAGAAPAPAVIAKMKEIGFDLLHVYGLTEVYGPAT 337
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA ++ W+ ++D ERARL ARQGVR A V+ P+T V DG++ GEI+FR
Sbjct: 338 VCAKQAHWDGVSDEERARLNARQGVRYHLEAGATVLDPDTMAPVPADGETLGEIMFRGNI 397
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
M GYLK+ + WF+TGD+ V+ DGY+ IKDR KD+IISGGENISS EVE
Sbjct: 398 CMKGYLKNPHATDEAFH-GGWFHTGDLAVLSPDGYIRIKDRKKDIIISGGENISSIEVED 456
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
LY +PA+ A+VA D WG+ PCAFV L+ +S TEE I+ CR L + K+
Sbjct: 457 ALYRHPAVAVAAVVAMPDPKWGEVPCAFVELREGMSA--TEEEIVAHCRQLLAGFKVPKA 514
Query: 412 VIIEDELPKTATGKIQKFVLREIVNA 437
V ELPKT+TGKIQKF LR V +
Sbjct: 515 VRF-GELPKTSTGKIQKFQLRSAVGS 539
>gi|84687729|ref|ZP_01015601.1| AMP-binding protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664230|gb|EAQ10722.1| AMP-binding protein [Rhodobacterales bacterium HTCC2654]
Length = 541
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 189/447 (42%), Positives = 255/447 (57%), Gaps = 27/447 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD V+ +L H E+K++ D Q + AL+ PKP ++ P
Sbjct: 103 RLDVGTVAYILEHGEAKVVLCDTQFLSVVEKALTQMNG----PKPKVVEVAAPEAGFPAT 158
Query: 65 GH------------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G P F W+ PE EW+ +ALNYTSGTT PKGVV+ HRG ++ T+ +
Sbjct: 159 GRHVEYEDFLDSGDPGFDWIIPEDEWESLALNYTSGTTGRPKGVVYSHRGAYLHTMGVAV 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W + + +L +P+FH N W ++W M AVG T + R + IY I GVTH G
Sbjct: 219 AWALTPKTRYLTIVPLFHCNNWCHTWTMPAVGATIVTCRDITAKAIYDAIADEGVTHFGG 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VL M+ + + D V++ T+GA PPAAVL E LGF V YGLTET G +
Sbjct: 279 APIVLGMIVNAKEADRRAFDHTVEVYTAGAPPPAAVLAGIEPLGFHVCQVYGLTETYGHI 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMD--VVHPETGMSVKHDGQSQGEIVFR 288
WK +W DTER +KARQGV G ADM+ V + V DG++ GEI+ R
Sbjct: 339 TETLWKDEWEDKPDTERYAIKARQGV---GHADMEEVTVLDDRMQQVPWDGEAVGEIMAR 395
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M GY K+ E ++ + +F++GDI H DGY++I DR+KDVIISGGEN+SS E
Sbjct: 396 GNVVMKGYFKNPEETAKAFK-GGYFHSGDIAFQHPDGYIKITDRAKDVIISGGENVSSVE 454
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VL +PA+ A+VA+ D+ WG+ PCAFV LK K TEE +I RA+L +
Sbjct: 455 VEDVLMHHPAVALCAVVAKPDEKWGEVPCAFVELK--EGAKVTEEELIAHTRAQLAGFKT 512
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIV 435
K V+ ELPKT+TGKIQKF LR++V
Sbjct: 513 PKKVVF-TELPKTSTGKIQKFELRKMV 538
>gi|406890026|gb|EKD36043.1| hypothetical protein ACD_75C01665G0002 [uncultured bacterium]
Length = 536
Score = 334 bits (857), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 182/436 (41%), Positives = 258/436 (59%), Gaps = 11/436 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS-----NTILPKPVLIHDDVSAT 59
RL VS +L+HS++K+ FVD + + LA L N D +
Sbjct: 94 RLSAPEVSYILNHSDTKICFVDNEFAGTVLAELGKLTHVRAFVNICDAGSDCPLDGIDYE 153
Query: 60 SSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQ 119
S G P + + E ++NYTSGTT PKGV++ HRG ++ + ++ + ++
Sbjct: 154 SLLMTGSPEAMAIDVDDERSVCSINYTSGTTGKPKGVMYHHRGAYLNGLGDCLETGLTSE 213
Query: 120 PVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNM 179
V+LWTLPMFH NGW + W + A G T++CLRKV I+ I VTH+C A +VL
Sbjct: 214 SVYLWTLPMFHCNGWCFPWAVTAAGATHVCLRKVIPDEIFKQIIAEKVTHMCAAPIVLIG 273
Query: 180 LSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKS 237
+++ P K L +RP+KI GA P ++ + ES+G V+H YGLTE G CAW +
Sbjct: 274 MANHPDFKNLKPERPLKIAVGGAPPSPTIIQQMESIGARVNHVYGLTEVYGPYTICAWHN 333
Query: 238 QWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYL 297
+WN L E+A +++RQGV +DVV PET V DG++ GE+V R +MLGY
Sbjct: 334 EWNALPAGEQASIRSRQGVAYTVCQFLDVVDPETMEPVPRDGKTIGEVVMRGNVVMLGYY 393
Query: 298 KDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
KD E + + DWF++GD+ V+H + Y++I DR KD+IISGGENIS+ EVE+VLY +P
Sbjct: 394 KDPEATEKAFK-GDWFHSGDLAVMHPNNYIQILDRQKDIIISGGENISTVEVENVLYRHP 452
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDE 417
+ EVA+VA D WG+ P AF++ K PT E +I FC+ L + A KS+ E
Sbjct: 453 DVMEVAVVAVPDSKWGEVPKAFITPK--PGTNPTAEELIAFCKENLARFKAPKSIEFV-E 509
Query: 418 LPKTATGKIQKFVLRE 433
LPKT+TGK+QKFVLR+
Sbjct: 510 LPKTSTGKVQKFVLRQ 525
>gi|126725183|ref|ZP_01741026.1| AMP-dependent synthetase and ligase [Rhodobacterales bacterium
HTCC2150]
gi|126706347|gb|EBA05437.1| AMP-dependent synthetase and ligase [Rhodobacteraceae bacterium
HTCC2150]
Length = 542
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 190/445 (42%), Positives = 260/445 (58%), Gaps = 24/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD V+ +L H E+ L VD Q PLA AA++ N KP +I + P
Sbjct: 103 RLDTDTVTYILEHGEAVALLVDTQFLPLAEAAIA----NMTGEKPRVIEVPDAGAGFPAT 158
Query: 65 GH------------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G PN W PE EW+ ++LNYTSGTT PKGVV HRG +++T+ +++
Sbjct: 159 GRYETYDDLLAAGDPNAPWTMPEDEWESISLNYTSGTTGRPKGVVAHHRGAYLMTMGTVV 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ P +L +P+FH NGW+++W M +GGT +C R + IY I GV + G
Sbjct: 219 SWRLQLYPKYLTIVPLFHCNGWNHTWMMPVLGGTVVCCRDITPAAIYDAIADEGVAYFGG 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNM+ + + D V++ T+GA P A L ESLGF ++ YGLTET G V
Sbjct: 279 APIVLNMIVNAKDEDRRDFDHTVEVFTAGAPPAPATLAAIESLGFNITQVYGLTETYGHV 338
Query: 231 VSCAW-KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C W ++W L +RA +KARQGV + D+ V+ + V DG +QGEI+ R
Sbjct: 339 TECVWDDTRWGELNGADRANIKARQGVAFPMMEDIAVLDGDM-QPVNRDGATQGEIMIRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
S+M GYLK+ E ++ +F++GD+ H DGY++I DR+KD+IISGGENISS EV
Sbjct: 398 NSVMKGYLKNPEATAEAFA-GGYFHSGDLANQHDDGYIQIADRAKDIIISGGENISSVEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L +PAI+ A+VA+ D WG+ PCAFV LK + TE +I F R RL +
Sbjct: 457 EGALMNHPAISLCAVVAKPDDKWGEVPCAFVELK--EGETATESEVITFVRERLAGFKTP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREI 434
K VI + ELPKT+TGKIQKF LR +
Sbjct: 515 KRVIFQ-ELPKTSTGKIQKFELRGV 538
>gi|225175988|ref|ZP_03729980.1| AMP-dependent synthetase and ligase [Dethiobacter alkaliphilus AHT
1]
gi|225168576|gb|EEG77378.1| AMP-dependent synthetase and ligase [Dethiobacter alkaliphilus AHT
1]
Length = 533
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 191/444 (43%), Positives = 272/444 (61%), Gaps = 28/444 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS-NTI-----------LPKPVLI 52
RL + V+ +L+HS +K+LFVD S + + S TI LP P +
Sbjct: 92 RLSSREVAYILNHSGAKILFVDTAFSHVIEPIVDELESVKTIVNIRDCSDGEELPGP--L 149
Query: 53 HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+++ AT G P V E E +++NYTSGTT PKGV++ HRG ++ + +
Sbjct: 150 YENFLAT-----GSPEDIPVSLEDENQTISINYTSGTTGLPKGVMYSHRGAYLNALGEAL 204
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ ++ +LWTLPMFH NGW ++WG+ AVGG +ICLR V V IY++I+ GV+H C
Sbjct: 205 ESQMNVYTNYLWTLPMFHCNGWCFTWGVTAVGGMHICLRSVVVKEIYTLIEEEGVSHFCA 264
Query: 173 ALVVLNMLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VL +++ P+ K L R + I+T+GA P V+ E +G + H YGLTET G
Sbjct: 265 APTVLITMANDPAAKELRLKRKLHIVTAGAPPSPTVIRNVEDIGAEIIHVYGLTETYGPH 324
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMS-VKHDGQSQGEIVFRS 289
CAW+ +W+TLA +RAR+K+RQGV I +M VV ++ M+ V DGQ+ GE+V R
Sbjct: 325 SICAWQPEWDTLAINDRARIKSRQGVPYITALEMRVV--DSSMNDVPADGQTMGEVVMRG 382
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GY D + + WF++GD+ V++ DGY+EIKDR KD+IISGGENIS+ E+
Sbjct: 383 NNVMKGYFNDADATEEAFA-GGWFHSGDLAVMNPDGYIEIKDRKKDIIISGGENISTVEL 441
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E +L+ +P + EVA+VA D+ WG+ P AFV K PTEE II++CR + Y
Sbjct: 442 EHLLFRHPHVQEVAVVAIPDEKWGEVPKAFVVPK--PGTDPTEEEIIQYCRDNIARYKCP 499
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
KSV D LPKT+TGKI+K+VLRE
Sbjct: 500 KSVEFGD-LPKTSTGKIKKYVLRE 522
>gi|331697768|ref|YP_004334007.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
gi|326952457|gb|AEA26154.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
Length = 524
Score = 333 bits (854), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 192/436 (44%), Positives = 262/436 (60%), Gaps = 19/436 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALS-LFPSNTILPKPVLIHDDVSA---TS 60
RL V+ +L HS + +L D L AL+ L S T P + ++ A +
Sbjct: 90 RLSAGEVAYILEHSGAAVLVHDPVFDELVDDALARLAGSGTAAPARIRAGEEYEALLAGA 149
Query: 61 SPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP 120
SP V P+ E +++NYTSGTT PKGV++ HRG ++ ++ + +
Sbjct: 150 SPLA-------VTPDDERALLSINYTSGTTGRPKGVMYHHRGAYLQALAMVGHTGMSPST 202
Query: 121 VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML 180
V LWTLPMFH NGW + W + A GT++CL KVD ++ +I+ GVTH+ GA VL+ML
Sbjct: 203 VHLWTLPMFHCNGWCFPWAVTAAAGTHVCLDKVDPARVWQLIREEGVTHLNGAPTVLSML 262
Query: 181 SSSPSTK---PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKS 237
+ + P DR V+I T GA P A+L R LGF V+H YGLTET G + C W+
Sbjct: 263 AYAEQAGEGVPGDRVVRIATGGAPPSPAILRRMAGLGFDVTHLYGLTETFGPAMICDWRP 322
Query: 238 QWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYL 297
+WN L E+ARLKARQGV + +V + G + DG S G+I R ++MLGY
Sbjct: 323 EWNGLDAEEQARLKARQGVGNMISCTARIVD-DNGADLPADGTSVGQIALRGNNVMLGYF 381
Query: 298 KDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
KD E ++ D WF TGD+GV+H DGY+E++DRSKDVIISGGENI+S EVE + +P
Sbjct: 382 KDPEATAAAAPDG-WFRTGDLGVMHPDGYVELRDRSKDVIISGGENIASVEVEQAVAEHP 440
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDE 417
A+ EVA++A D+ WG+ P A+V+L S TE+ IIE + RL + A K+V+ E
Sbjct: 441 AVLEVAVIAVPDERWGEVPAAYVTLHAGASV--TEQEIIEHVKGRLARFKAPKTVVF-GE 497
Query: 418 LPKTATGKIQKFVLRE 433
LPKT+TGKIQKFVLRE
Sbjct: 498 LPKTSTGKIQKFVLRE 513
>gi|23100121|ref|NP_693587.1| AMP-binding protein [Oceanobacillus iheyensis HTE831]
gi|22778353|dbj|BAC14622.1| AMP-binding enzyme [Oceanobacillus iheyensis HTE831]
Length = 530
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/443 (42%), Positives = 267/443 (60%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ-SSPLALAALSLFPSNTILPKPVLIHDDVSATS--- 60
RL K ++ +++HS++KLL VD + P+ SL L + +++ D +TS
Sbjct: 88 RLSAKDLNYIINHSDAKLLIVDEAFTEPIEEIQNSLS-----LEEMIIVEVDGESTSLQG 142
Query: 61 ---SPTVGHPNFKWVQPESEWDP---MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
+ H N K P E D M +NYTSGTTS+PKGV+ HR +I + L
Sbjct: 143 TLYEALIHHDNDKVELPIVEIDENQLMTINYTSGTTSNPKGVMLTHRSNYINAANFLYHI 202
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ + +L TLPMFH NGW W + A GGT++CLRKVD P+I + + +T +CGA
Sbjct: 203 NVSHDDRYLHTLPMFHANGWGGVWAITAAGGTHVCLRKVDPPLILDIFEEQQITMLCGAP 262
Query: 175 VVLNMLSSSPSTKPLDRPVKI-LTSGASPPAAVLLR--TESLGFVVSHSYGLTETAGFVV 231
V+NML + P K L+ K+ + + SPPAA L++ + LG + H YGLTET+ F++
Sbjct: 263 TVVNMLVNEPKAKQLNLQSKLRMATAGSPPAAALIQKAQDILGLEMVHVYGLTETSPFIL 322
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C WK +N + E+A +KARQG+ + V+ P+ G V +G+ GEIV R
Sbjct: 323 YCEWKQDFNEKSSDEQATIKARQGIELAFNGETTVIRPD-GEEVLWNGEELGEIVTRGNV 381
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GY KD E + M+D WF+TGD+ V+HSDG++EI+DR+KD+IISGGENISS EVE
Sbjct: 382 VMQGYYKDVEKTDAAMKDG-WFHTGDLAVIHSDGFIEIRDRAKDLIISGGENISSTEVEG 440
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P + EVA++A D+ WG+ P A + + TEE +I +CR L H+ + K
Sbjct: 441 VLYKHPDVLEVAVIAIPDEKWGEVPLAIIVP--QPHSALTEEEVITYCRENLAHFKSPKK 498
Query: 412 VIIEDELPKTATGKIQKFVLREI 434
V +ELPKTATGK+QKF LRE+
Sbjct: 499 VEFVEELPKTATGKLQKFRLREL 521
>gi|357418197|ref|YP_004931217.1| AMP-dependent synthetase and ligase [Pseudoxanthomonas spadix
BD-a59]
gi|355335775|gb|AER57176.1| AMP-dependent synthetase and ligase [Pseudoxanthomonas spadix
BD-a59]
Length = 544
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 191/441 (43%), Positives = 271/441 (61%), Gaps = 19/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L ++E+K+L VD + +P+ AL L P V+ DD T+ V
Sbjct: 103 RLDAPTIAFMLDYAEAKVLLVDREFAPVIAQALKLCRQ----PPRVVDVDDAEVTAGDFV 158
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G ++ P+ EWD ++LNYTSGTT PKGVV+ HRG ++ V+++ID
Sbjct: 159 GEIEYEAFIAGGDAALEMALPDDEWDAISLNYTSGTTGDPKGVVYHHRGAYLNAVANIID 218
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P PV+LWTLPMFH NGW + W MAAV GT +CLR+ + + +++ H VTH CGA
Sbjct: 219 WSMPPHPVYLWTLPMFHCNGWCFPWTMAAVAGTQVCLRRFEPRHVLELMREHRVTHYCGA 278
Query: 174 LVVLNMLSSSPST-KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+V + L ++P K V +GA+PPAAV+ E +GF ++H YGLTET G
Sbjct: 279 PIVHSALVAAPEEWKHGISGVHAQVAGAAPPAAVIEGMERMGFHITHVYGLTETYGPASL 338
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C K +W+ L RA L +RQGV + DM V+ P+T V DGQ+ GEI+FR
Sbjct: 339 CQQKEEWSALDIQARADLNSRQGVACLLQEDMQVLDPQTLQPVPWDGQTIGEIMFRGNIT 398
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + ++ + WF+TGD+ VV DGY++I+DRSKDVIISGGENISS EVE
Sbjct: 399 MKGYLKNPDATARAF-EGGWFHTGDLAVVDPDGYVKIRDRSKDVIISGGENISSIEVEDA 457
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L +PA+ A+VA+ D+ WG+ PCAF+ LK P +A+ ++CR L + ++
Sbjct: 458 LCRHPAVMAAAVVARPDEKWGETPCAFIELKAGSEPLPA-DALQQYCRTHLAGFKVPRAF 516
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+ ELP+T+TGK+QKF+LRE
Sbjct: 517 VF-GELPRTSTGKVQKFLLRE 536
>gi|333979082|ref|YP_004517027.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822563|gb|AEG15226.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum kuznetsovii DSM
6115]
Length = 536
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 187/441 (42%), Positives = 262/441 (59%), Gaps = 21/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS----------NTILPKPVLIHD 54
RL + ++ +++HS+SK LFVD + + L A P+ N P ++
Sbjct: 94 RLSPREIAYIINHSDSKALFVDNEFAHLITAIQEDLPNIKTFVNICDVNDSRPLDGPEYE 153
Query: 55 DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
+ A SP PN E E + +A+NYTSGTT PKGV++ HRG ++ + ++
Sbjct: 154 EFLADGSPD-PLPNVI----EDEMEVIAINYTSGTTGLPKGVMYHHRGAYLNALGEALEH 208
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + V+LWTLPMFH NGW ++WG+ AVGGT++CLRKV IY +I+ GVTH+C A
Sbjct: 209 KMSSSSVYLWTLPMFHCNGWCFTWGVTAVGGTHVCLRKVVPEDIYLLIEREGVTHLCAAP 268
Query: 175 VVLNMLSSSPSTKPLDRPVK--ILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
VL +++ P K K ++T+GA P V+ E +G V+H YGLTE G
Sbjct: 269 TVLVSMANYPRAKEYQMKTKLNVITAGAPPSPTVIKNMEEIGAEVTHVYGLTEVYGPHTI 328
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C W++ WN L +E+A++KARQGV I + VV P V DGQ+ GEIV R ++
Sbjct: 329 CEWQAPWNELDTSEKAKIKARQGVAYIHAEFVRVVDPAEMTDVPADGQTIGEIVMRGNNV 388
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
MLGY K E + R WF++GD+ V+H +GY+EIKDR KD+IISGGENIS+ EVE+
Sbjct: 389 MLGYYKQLEETEKAFR-GGWFHSGDLAVMHPNGYIEIKDRLKDIIISGGENISTVEVENC 447
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
+Y +P + EVA++ D WG+ P AFV K PT E II FCR R+ + K+V
Sbjct: 448 IYEHPDVLEVAVIGIPDPKWGEVPKAFVVPK--PGTNPTAEEIINFCRERIARFKVPKAV 505
Query: 413 IIEDELPKTATGKIQKFVLRE 433
ELPKT+TGKI K+ LRE
Sbjct: 506 EF-GELPKTSTGKIMKYRLRE 525
>gi|224065058|ref|XP_002301650.1| predicted protein [Populus trichocarpa]
gi|222843376|gb|EEE80923.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 166/324 (51%), Positives = 215/324 (66%), Gaps = 6/324 (1%)
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
N PV+LW+LPMFH NGW+++WG+AA GGTN+CLR +Y+ I H VTH+C A +V
Sbjct: 3 NAPVYLWSLPMFHCNGWTFTWGVAARGGTNVCLRNTSAKDMYNNIAEHAVTHMCCAPIVF 62
Query: 178 N-MLSSSP-STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
N +L + P + + PV+ILT GA PPA++L + E LGF V+H+YGLTE G + C W
Sbjct: 63 NILLEARPHERREITSPVEILTGGAPPPASLLQKIERLGFHVTHAYGLTEATGPALVCEW 122
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ +WN L ++A+LKARQG+ + LAD DV +T +SV DG++ GEIV R SIM G
Sbjct: 123 QKKWNKLPQQDQAKLKARQGISILTLADADVKDLDTMVSVPRDGKTMGEIVLRGSSIMKG 182
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y KD E +S R N W TGD+GV+H DGYLEIKDRSKDVIISGGENISS E+ESVLY
Sbjct: 183 YFKDPEATSKAFR-NGWLATGDVGVIHPDGYLEIKDRSKDVIISGGENISSVELESVLYR 241
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT---EEAIIEFCRARLPHYMAHKSV 412
+P + E A+VA WG+ PCAF+S+K S E II +C+ LP + K V
Sbjct: 242 HPRVLEAAVVAMPHPRWGESPCAFISVKKNSSGDTNDVKESDIIAYCKKNLPRFTVPKRV 301
Query: 413 IIEDELPKTATGKIQKFVLREIVN 436
ELPKT+TGK+ K LR +
Sbjct: 302 EFMAELPKTSTGKVLKIQLRALAQ 325
>gi|238024592|ref|YP_002908824.1| acyl-CoA synthetase [Burkholderia glumae BGR1]
gi|237879257|gb|ACR31589.1| acyl-CoA synthetase [Burkholderia glumae BGR1]
Length = 557
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/442 (43%), Positives = 258/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD + +L H E+KLL VD + + LA P I+ + D ++ T
Sbjct: 102 RLDAASILFMLRHGEAKLLIVDTEYAELARRVAQALPGLRIVCVADALPADPASFGGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P + W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S+L++W +P
Sbjct: 162 YEAFLASGDPAYAWAPPADEWDAIALNYTSGTTGEPKGVVYHHRGAYLAALSNLLEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDPRSVFELIRRERVTHYSGAPIVH 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
L+ +P+ +D V +GA+P AV+ + +++GF + H YGLTE G CA
Sbjct: 282 GALADAPAEWRAGIDHLVHAQVAGAAPAPAVIAKMKAIGFELLHVYGLTEIYGPATVCAE 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ W L D E A LKARQGVR A V+ P+T SV DG++ GEI+FR M G
Sbjct: 342 QQHWAALPDDEAAGLKARQGVRYHLQAGATVLDPDTMRSVPADGETLGEIMFRGNLCMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS E+E LY
Sbjct: 402 YLKNPAATDEAF-AGGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIELEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ ++ +E I+ CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELREGMAA--SEAEILAHCRTLLAGYKMPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V A
Sbjct: 518 GELPKTSTGKIQKFQLRSRVRA 539
>gi|297172460|gb|ADI23433.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
gamma proteobacterium HF0770_33G18]
Length = 541
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 181/441 (41%), Positives = 263/441 (59%), Gaps = 19/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD K + +L H E+K+L D + + + + ++ V I D SSP
Sbjct: 101 RLDPKTIRFILDHGEAKVLLADLAFADVLETVVKDLNRDILI---VQIGDSDEGLSSPNG 157
Query: 63 --------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
+ G +F +P+ EW ++L YTSGTT PKG V+ HRG ++ ++++
Sbjct: 158 KTAYETLLSEGSCSFVGDEPQDEWQALSLLYTSGTTGDPKGCVYHHRGAYLSAMANMNTV 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ V+LWTLPMFH +GW+++W + A T++CLR++D II+ +I+ V+H+CGA
Sbjct: 218 GLNRDSVYLWTLPMFHCDGWTFTWAVTAAMATHVCLRQMDPGIIFQLIRDEKVSHMCGAP 277
Query: 175 VVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VLNML+++ + + P V+I T GA+PP+AV+ E GF V+H YGLTET G
Sbjct: 278 IVLNMLANARADQKCTFPQIVEISTGGAAPPSAVIEAMEEHGFRVTHLYGLTETYGPATV 337
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C + W L+ T+R+ ARQGV L V PET V D Q+ GE++ R ++
Sbjct: 338 CIPQVDWPELSTTQRSAKIARQGVHYGTLEGGTVKDPETMEDVPWDAQTLGEVMVRGNTV 397
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLK+ + C WF++GDI V H DGY+E+KDRSKD+IISGGENISS EVE +
Sbjct: 398 MKGYLKNSTATDACF-SGGWFHSGDIAVRHPDGYIEVKDRSKDIIISGGENISSLEVEEI 456
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P I E A+VA+ D WG+ PCAFV+L + E ++ +CR L + +SV
Sbjct: 457 LYRHPDILEAAVVARPDPKWGESPCAFVTLHDGVHAD--EANVVGYCRQHLAGFKVPRSV 514
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+ LPKT+TGKIQKF+LR+
Sbjct: 515 VF-GPLPKTSTGKIQKFLLRD 534
>gi|359797325|ref|ZP_09299911.1| acyl-CoA synthetase [Achromobacter arsenitoxydans SY8]
gi|359364826|gb|EHK66537.1| acyl-CoA synthetase [Achromobacter arsenitoxydans SY8]
Length = 551
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 188/443 (42%), Positives = 264/443 (59%), Gaps = 12/443 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP------KPVLIHDDVSA 58
RLD V +L H E++ L VD + + +A A + FP ++ P +
Sbjct: 102 RLDTPSVLFMLGHGEARALIVDTEYADIAQRARAEFPHLKVISVHDLEGAPATLPGATDY 161
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
+ + W P EWD +ALNYTSGTT PKGVV+ +RG ++ VS++++W +P
Sbjct: 162 EAFLAAAPAAYDWKPPADEWDAIALNYTSGTTGDPKGVVYHYRGAYLNAVSNILEWDMPK 221
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
PV+LWTLP+FH NGW ++W +AA G N+CLRK D ++ + + GVTH CGA +V +
Sbjct: 222 HPVYLWTLPLFHCNGWCFAWTVAARAGVNVCLRKFDPKTVFDLTRDEGVTHYCGAPIVQS 281
Query: 179 MLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
L+++P+ + V+ + +GA+P AV+ + +GF ++H YGLTE G CA +
Sbjct: 282 ALANAPADMRAGITHTVRTMVAGAAPAPAVIDKMREIGFELTHVYGLTEVYGPAAVCAHQ 341
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
W+ L RA L ARQGVR A + V +PET V D ++ GE++FR M GY
Sbjct: 342 DAWDALDPERRALLTARQGVRYHLQAGVSVRNPETMQEVPPDEETIGEVMFRGNICMKGY 401
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
LK++ + WF+TGD+GV+ +DGY+ IKDRSKD+IISGGENISS EVE LY +
Sbjct: 402 LKNERATEDAFA-GGWFHTGDLGVMTADGYVRIKDRSKDIIISGGENISSIEVEDALYRH 460
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
PA+ VA+VA D WG+ PCAFV LK S T + II C+ LP + ++V
Sbjct: 461 PAVAAVAVVAMPDPKWGETPCAFVELKPGCSA--TADEIIAHCKLLLPGFKVPRAVRF-G 517
Query: 417 ELPKTATGKIQKFVLREIVNAVN 439
ELPKT+TGKIQKF LR V A +
Sbjct: 518 ELPKTSTGKIQKFELRAAVGATS 540
>gi|224370890|ref|YP_002605054.1| protein AcsA3 [Desulfobacterium autotrophicum HRM2]
gi|223693607|gb|ACN16890.1| AcsA3 [Desulfobacterium autotrophicum HRM2]
Length = 525
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 260/437 (59%), Gaps = 16/437 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + ++ +L +S+SK LF+D + + L + ++ DV+ +
Sbjct: 92 RLAPEEIAYILENSQSKFLFIDTEFADSIRPVLDEINQMNV---EIVNICDVTEKAFDAP 148
Query: 65 GHPNFKWVQPES-------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ F V+PE E P++LNYTSGTT PKGV++CHRG ++ + ++++ I
Sbjct: 149 EYEAFISVEPEEFFFGVEDEMQPISLNYTSGTTGRPKGVLYCHRGAYLNALGEILEYHIN 208
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
+ +LWTLPMFH NGW ++WG+ A G T ICLRKV I+S I H TH+CGA +VL
Sbjct: 209 SDSKYLWTLPMFHCNGWCHTWGVFAPGATQICLRKVVPEEIFSNIAKHKATHLCGAPIVL 268
Query: 178 NMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+S ++ I T+GA P +++ + E LG V+ YGLTE G C W
Sbjct: 269 AGMSEYAQHHDVNVTEGFVINTAGAPPSPSIIKQMEHLGCSVTQCYGLTELYGPHSLCEW 328
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
K +W+ L ERA++KARQGV I MDVV ET + V HDG++ GEIV R ++MLG
Sbjct: 329 KKEWDELPIDERAKIKARQGVAYITTNYMDVVDEETMVPVPHDGKTLGEIVARGNNVMLG 388
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y D + R WF++GD+ V H DGY+EIKDR KDVIISGGENISS E+E+VLY
Sbjct: 389 YHDDPGETEKAFR-GGWFHSGDLAVTHPDGYIEIKDRLKDVIISGGENISSVEIENVLYE 447
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
P + EVA+V D+ W + P A+++L+ K T+E II FC+ L + A K VI
Sbjct: 448 YPDVLEVAVVGIPDEKWQEVPKAYITLR--KGAKTTKEDIIAFCKQHLAKFKAPK-VIEF 504
Query: 416 DELPKTATGKIQKFVLR 432
ELPKTATGKIQK VLR
Sbjct: 505 TELPKTATGKIQKHVLR 521
>gi|167567774|ref|ZP_02360690.1| acyl-CoA synthetase [Burkholderia oklahomensis EO147]
gi|167572539|ref|ZP_02365413.1| acyl-CoA synthetase [Burkholderia oklahomensis C6786]
Length = 553
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 259/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P TI+ P H
Sbjct: 102 RLDIPSMLFMLRHGEAKVLIVDTEFAEFAHRAALEVPGLTIVGVADAMPADPARFHGATD 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EWD +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFLEGGDPGYAWALPSDEWDAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKLVLDLIRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ W+ L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QPHWDALPDDEVAQLNARQGVRYHLQAGATVLDPDTMTPVPADGETIGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ ++ TEE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELRDGMTA--TEEEIIAHCRLLLAAYKIPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|399994952|ref|YP_006575184.1| ATP-dependent AMP binding enzyme [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
gi|398659500|gb|AFO93465.1| ATP-dependent AMP binding enzyme [Phaeobacter gallaeciensis DSM
17395 = CIP 105210]
Length = 543
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 186/443 (41%), Positives = 270/443 (60%), Gaps = 21/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL+ + ++ +L H+++K + VD + PL A + + + + I D A V
Sbjct: 101 RLEPETIAYILDHADTKAVIVDRELIPLLSMAFAAMGRSVSV---IEIDDRNVAAPHTLV 157
Query: 65 GHPNFKWVQ----------PESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P + + P+ EWD +ALNYTSGT+ PKGVV+ HRG +++ + + W
Sbjct: 158 GKPYEELLTDGAGGAPLDLPQDEWDAIALNYTSGTSGRPKGVVYHHRGAYLMALGTAAAW 217
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ P+ P++L +PMFH NGW +SW MA +GGT + R +I I+ HGVTH A
Sbjct: 218 QTPHYPIYLSVVPMFHCNGWGHSWVMAMLGGTMVFTRTPSPDLILDAIRSHGVTHFGAAP 277
Query: 175 VVLNMLSSSP----STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
+VL ML+ + ST P D +K+LT+GA PP +VL +T+++G V YGLTET G +
Sbjct: 278 IVLQMLAEAEAETGSTTPFDPAIKVLTAGAPPPPSVLQKTKAMGLDVMQVYGLTETYGHI 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C W+ W + E+A+L+A+QG+ + + V+ +TG+ V DGQ+QGEI R
Sbjct: 338 SKCLWQDSWADKIEAEQAQLQAQQGIAMPMVEAVSVIDTDTGIPVARDGQTQGEIAVRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GY KD + + +N WF++GD VVH+DGY++I+DR KDVIISGGENISS EVE
Sbjct: 398 TVMKGYYKDADATDKAF-ENGWFWSGDGAVVHADGYMQIRDRLKDVIISGGENISSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+VLY +PA+ A+VA+ D WG+ PCAF+ L+ T E II FCR L + A K
Sbjct: 457 AVLYRHPAVQAAAVVAKPDPKWGEVPCAFIELR--TGSDLTSEEIIAFCRTHLAGFKAPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+V+ LPKT+TGKIQKF LR+
Sbjct: 515 TVVFT-SLPKTSTGKIQKFQLRD 536
>gi|170746513|ref|YP_001752773.1| AMP-dependent synthetase and ligase [Methylobacterium radiotolerans
JCM 2831]
gi|170653035|gb|ACB22090.1| AMP-dependent synthetase and ligase [Methylobacterium radiotolerans
JCM 2831]
Length = 550
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 178/433 (41%), Positives = 247/433 (57%), Gaps = 7/433 (1%)
Query: 5 RLDHKRVSVLLHHSESKLLFVD--YQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP 62
RLD ++ L H ++ L V+ Y A P + I +S
Sbjct: 116 RLDAATIAFSLRHGGARALLVEAEYAGLAARALADLAEPILVVAIGDSGIDGALSYGDLL 175
Query: 63 TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
G P++ W PE EW + L YTSGTT PKG V+ HRG ++ + + + + + + V+
Sbjct: 176 AEGDPDYAWAGPEDEWQSLCLLYTSGTTGDPKGAVYSHRGGYLQALGNAVTFGLTGESVY 235
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSS 182
LWTLPMFH +GWSY W A T +CLRKV+ I+ +I HGVTH+CGA +VL+M++
Sbjct: 236 LWTLPMFHCSGWSYPWASVAACATQVCLRKVEPAAIFRLIAEHGVTHLCGAPIVLSMIAH 295
Query: 183 SPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWN 240
+P+ P + V+ GA+P + ++ E LGF V+H YG TE+ G C + W
Sbjct: 296 APAQDRVPFPQRVRCAVGGAAPSSTIIRTMEELGFQVTHLYGATESYGPATVCLAQPDWT 355
Query: 241 TLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQ 300
L DTER ARQGV L + V T + V DG + GEI R ++M GYL +
Sbjct: 356 DLPDTERYARMARQGVPLATLEAVSVADTATDVPVPRDGTTVGEIRLRGNTVMKGYLGNP 415
Query: 301 EGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAIN 360
+ + D W+ TGD+ V H DG +EIKDR+KD+IISGGENISS EVE VL +PA+
Sbjct: 416 GATEAALADG-WYRTGDLAVWHPDGSVEIKDRAKDIIISGGENISSLEVEEVLMRHPAVM 474
Query: 361 EVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPK 420
A+VA+ D WG+ PCAF+ +K S P+E+ +I FCR + + K+V+ LPK
Sbjct: 475 LAAVVARPDPTWGESPCAFLEVKPGTS-VPSEQELIAFCREHMARFKVPKTVVF-GPLPK 532
Query: 421 TATGKIQKFVLRE 433
T+TGKIQKFVLRE
Sbjct: 533 TSTGKIQKFVLRE 545
>gi|124266628|ref|YP_001020632.1| CoA ligase [Methylibium petroleiphilum PM1]
gi|124259403|gb|ABM94397.1| putative CoA ligase (AMP-forming) [Methylibium petroleiphilum PM1]
Length = 552
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 181/443 (40%), Positives = 260/443 (58%), Gaps = 18/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS-NTILPKPVLIHDDVSATSSPT 63
RLD ++ ++H E+++L D + +P AL L S + P + + D A
Sbjct: 105 RLDAALLAWQMNHCEAQVLITDREFAPTIAEALRLLHSEHGRTPIVIDVCDSEYAGPGDR 164
Query: 64 VGHPNFKWVQ-----------PESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G ++ + P EWD +A++YTSGTT PKGVV HRG ++ VS+
Sbjct: 165 LGTHEYEALLAAHAPLARLDGPADEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVSNAA 224
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P+ P++LWTLPMFH NGW + W +A +GGT++CLR+VD P I ++ H V H C
Sbjct: 225 TWTMPHFPIYLWTLPMFHCNGWCFPWTIAMLGGTHVCLRRVDAPSILGAMREHRVDHYCA 284
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V N+L ++P + + V+ + +GA+PPAA++ LGF ++H YGLTE G
Sbjct: 285 APIVHNLLIAAPDELRAGITQKVRGMVAGAAPPAAMIEGMAKLGFDITHVYGLTEVYGPA 344
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
++ W + +E+ RL RQGVR M V+ PET + DGQ+ GEI+FR
Sbjct: 345 AVAVKRASWAGESLSEQTRLNGRQGVRYALQEGMTVLDPETMVETPADGQTMGEIMFRGN 404
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + S+ WF+TGD+ V+ D Y++IKDRSKD+IISGGENISS EVE
Sbjct: 405 IVMKGYLKNPQASAAAFA-GGWFHTGDLAVMEPDRYVKIKDRSKDIIISGGENISSIEVE 463
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
LY +PA+ A+VA+ D WG+ P A+V LK E ++ C++ L Y A K
Sbjct: 464 DALYRHPAVMACAVVARPDPKWGETPVAYVELKPGAEVSAAE--LVTHCKSLLAGYKAPK 521
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V E +PKT+TGKIQKF LRE
Sbjct: 522 EVRFE-AIPKTSTGKIQKFQLRE 543
>gi|393765127|ref|ZP_10353717.1| AMP-dependent synthetase and ligase [Methylobacterium sp. GXF4]
gi|392729419|gb|EIZ86694.1| AMP-dependent synthetase and ligase [Methylobacterium sp. GXF4]
Length = 550
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 180/439 (41%), Positives = 259/439 (58%), Gaps = 9/439 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ L H +++L V+ + LA AL+ + IL + A TV
Sbjct: 116 RLDPATIAFSLDHGGARVLIVEAEYGALAARALADR-AGPILVVEIGASGIAGAIPYETV 174
Query: 65 ---GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPV 121
G P++ W P EW + L YTSGTT PKG V+ HRG ++ + + + + + + V
Sbjct: 175 LAEGDPDYAWPGPADEWQSLCLLYTSGTTGDPKGAVYSHRGAYLQALGNAVTFGLTGESV 234
Query: 122 FLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLS 181
+LWTLPMFH +GWSY W A T ICLRKV+ I+S+I HGVTH+CGA +VL++++
Sbjct: 235 YLWTLPMFHCSGWSYPWASVAACATQICLRKVEPAAIFSLIAEHGVTHLCGAPIVLSIIA 294
Query: 182 SSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQW 239
+P++ P + V+ GA+P + ++ E LGF V+H YG TE+ G C + W
Sbjct: 295 HAPASDRVPFPQRVRCAVGGAAPSSTIIRTMEELGFQVTHLYGATESYGPATVCLEQPDW 354
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKD 299
L D +R ARQGV L VV P+T V DG + GEI R ++M GYL +
Sbjct: 355 ADLPDDDRYARMARQGVPLATLEAAIVVDPDTDRPVPQDGLTVGEICLRGNTVMKGYLGN 414
Query: 300 QEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAI 359
+ ++ + W+ TGD+ V H DG +EIKDR+KD+IISGGENISS EVE VL +PA+
Sbjct: 415 PDATAKALA-GGWYRTGDLAVWHPDGAVEIKDRAKDIIISGGENISSLEVEEVLMRHPAV 473
Query: 360 NEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELP 419
A+VA+ D WG+ PCAF+ +K + P+++ +I FCR R+ + ++V+ LP
Sbjct: 474 MLAAVVARPDATWGESPCAFLEMK-PGAASPSDQELIAFCRERMARFKVPRTVVF-GPLP 531
Query: 420 KTATGKIQKFVLREIVNAV 438
KT+TGKIQKFVLRE A+
Sbjct: 532 KTSTGKIQKFVLREQARAL 550
>gi|78045072|ref|YP_360452.1| AMP-binding protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77997187|gb|ABB16086.1| AMP-binding enzyme family protein [Carboxydothermus
hydrogenoformans Z-2901]
Length = 535
Score = 331 bits (849), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 179/440 (40%), Positives = 257/440 (58%), Gaps = 17/440 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L+HSESK+L VD S LA ++ + K V+I+ T P V
Sbjct: 93 RLKSNEILYILNHSESKILIVD---SELASLIEPIYDQLETVQKIVMINQVPRETKLPAV 149
Query: 65 --------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
G P + E E++P+ LNYTSGTT PKGV + HRG ++ ++S +I+ +
Sbjct: 150 DYEEFLQEGEPEDLPIPIEDEFEPITLNYTSGTTGFPKGVQYTHRGAYLNSLSEVIEMGL 209
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+LW LPMFH NGW ++W + AVG T+ C RK + +I+ +T+ CGA VV
Sbjct: 210 NQYSKYLWILPMFHCNGWCFTWAVTAVGATHYCFRKFEPEAALEIIEKEKITNFCGAPVV 269
Query: 177 LNMLSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
N ++++ + L + P++ +GA+P ++ + E LG V H YGLTE G C
Sbjct: 270 FNAMTAAKKAEGLKFNHPIRAFIAGAAPSPTIISKMERLGVEVVHVYGLTEVYGPFTVCE 329
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W +W+ L+ E+A KARQGV + ++ VV E V DG++ GEIV R +M
Sbjct: 330 WHPEWDNLSAEEKAIYKARQGVPMVTTGEVRVVDAEMN-DVPADGKTMGEIVMRGNGVMA 388
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GY K E ++ WF++GD+ V+H +GY+EI DRSKD+IISGGENISS EVE+VLY
Sbjct: 389 GYYKAPEDTAKAFA-GGWFHSGDLAVMHPNGYIEIMDRSKDIIISGGENISSVEVENVLY 447
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ EVA+VA D+ WG+ P AF+ L+ S P E +I +CR ++ + K +
Sbjct: 448 SHPAVYEVAVVASPDERWGEVPKAFIVLREGASVTPEE--LIAYCREKMAGFKVPKKIEF 505
Query: 415 EDELPKTATGKIQKFVLREI 434
D LPKT TGKIQKFVLR +
Sbjct: 506 VDALPKTPTGKIQKFVLRNL 525
>gi|300024120|ref|YP_003756731.1| AMP-dependent synthetase and ligase [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525941|gb|ADJ24410.1| AMP-dependent synthetase and ligase [Hyphomicrobium denitrificans
ATCC 51888]
Length = 541
Score = 331 bits (848), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 187/448 (41%), Positives = 265/448 (59%), Gaps = 22/448 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVS------A 58
RLD V+ L H+++KLL D + S A +S + ++ +DD A
Sbjct: 102 RLDAAIVAFQLDHADTKLLITDREFS----ATMSAALALAKAKPIIIDYDDPEFPQTGEA 157
Query: 59 TSSP------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
SS + G P F W PE EW+ ++LNYTSGTT +PKGVV+ HRG ++ ++ I
Sbjct: 158 LSSDDYEAFVSSGDPEFAWRWPEDEWEAISLNYTSGTTGNPKGVVYHHRGAALMCYANTI 217
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+LWTLPMFH NGW + W + GT++CLR V +Y I H VTH+ G
Sbjct: 218 STGMTRFPVYLWTLPMFHCNGWCFPWSVTMAQGTHVCLRWVRAKAMYDAIVDHKVTHLSG 277
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V+ L ++P+ +P+ V + A PPAAV+ GF ++H YGLTET G
Sbjct: 278 APIVMATLLNTPAEEKRPISHVVAFNHAAAPPPAAVISAMTDAGFELTHLYGLTETYGPA 337
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
W WN L +R+ + RQG+R + L + V+ PET V DG++ GE++FR
Sbjct: 338 TINEWDPSWNDLPAPDRSAKRIRQGIRYVALEALTVMDPETMTEVPADGETLGEVMFRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + + WF++GD+GV+H DGY+++KDRSKD+IISGGENISS EVE
Sbjct: 398 IVMKGYLKNPKATGEAFA-GGWFHSGDLGVMHPDGYIQLKDRSKDIIISGGENISSIEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P + A+VA+ D+ WG+ PCAF+ L+ S TEE I+E+CR L + +
Sbjct: 457 EVLYKHPGVAFCAVVAKPDEKWGETPCAFIELRPGASA--TEEEILEWCRQGLARFKVPR 514
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNAV 438
V+ E+PKT+TGKIQKF LRE+ V
Sbjct: 515 RVVFA-EVPKTSTGKIQKFKLREMAKDV 541
>gi|257454119|ref|ZP_05619392.1| AMP-dependent synthetase and ligase [Enhydrobacter aerosaccus SK60]
gi|257448447|gb|EEV23417.1| AMP-dependent synthetase and ligase [Enhydrobacter aerosaccus SK60]
Length = 515
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 183/449 (40%), Positives = 261/449 (58%), Gaps = 26/449 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ-SSPLALAALSLFPSNTILPKPVLIH-DDVSATSSP 62
RLD + L HSE+K+L VD + +AL S P ++IH D + T +
Sbjct: 26 RLDINALVFCLQHSEAKVLIVDTEFEQHIALVQESF-------PNLIIIHATDPAVTPTE 78
Query: 63 TVGHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G+ ++ W +P EWD +ALNYTSGTT PKGVV+ HRG + VS++
Sbjct: 79 QFGNMTYEELIASGTDLDNWEKPTDEWDAIALNYTSGTTGIPKGVVYHHRGATLNAVSNI 138
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+DW +P PV+LWTLP+FH NGWS+ W + GTN+CLRKVD +I +I VTH
Sbjct: 139 LDWDMPKHPVYLWTLPLFHCNGWSFPWSIGERAGTNVCLRKVDADLILRLIADEKVTHYS 198
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
A +V NM+++ K + V+ +GA PP ++L + E +GF ++H YGLTE G
Sbjct: 199 AAPIVHNMIANGNEALKKAIKHEVRCNVAGAPPPESLLAKMEEMGFKITHVYGLTEVYGP 258
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
V C + +W+ L +ERA+ K+RQG+ + LA DV T V DG GE+ R
Sbjct: 259 VTLCVERPEWDDLTVSERAQKKSRQGMNSHLLAGFDVFKQGTTTPVAADGSEIGELAIRG 318
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+++ ++ + WF TGD+GV + DGY++I DR KD+IISGGENISS EV
Sbjct: 319 NMVMKGYLKNRKATAEAF-NGGWFKTGDLGVKYPDGYIKIMDRLKDIIISGGENISSIEV 377
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E+VLY P + +VA WG+ P AF+ ++ E S E+ II CR L +
Sbjct: 378 ENVLYRMPEVESCGVVAAPHDKWGEVPVAFIEIR-EGSTLDRED-IIAHCRKYLAGFQVP 435
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K +I ++PKT+TGK+QKF LR+ ++
Sbjct: 436 KHIIFA-QIPKTSTGKVQKFELRQAARSL 463
>gi|167616531|ref|ZP_02385162.1| acyl-CoA synthetase [Burkholderia thailandensis Bt4]
Length = 551
Score = 330 bits (846), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 260/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P I+ P +
Sbjct: 102 RLDIASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLAIVSVADAMPADPARFPAAID 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFLAGGDPTYTWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKLVLDLIRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ ++ V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIEHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TEE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELREGMSA--TEEEIIAHCRLLLAAYKIPKTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|83717079|ref|YP_439880.1| acyl-CoA synthetase [Burkholderia thailandensis E264]
gi|257143038|ref|ZP_05591300.1| acyl-CoA synthetase [Burkholderia thailandensis E264]
gi|83650904|gb|ABC34968.1| AMP-binding domain protein [Burkholderia thailandensis E264]
Length = 553
Score = 330 bits (845), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 260/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P I+ P +
Sbjct: 102 RLDIASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLAIVSVADAMPADPARFPAAID 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFLAGGDPTYTWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKLVLDLIRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ ++ V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIEHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TEE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELREGMSA--TEEEIIAHCRLLLAAYKIPKTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|254300042|ref|ZP_04967488.1| AMP-binding enzyme [Burkholderia pseudomallei 406e]
gi|418543259|ref|ZP_13108628.1| acyl-CoA synthetase [Burkholderia pseudomallei 1258a]
gi|418549790|ref|ZP_13114812.1| acyl-CoA synthetase [Burkholderia pseudomallei 1258b]
gi|157809973|gb|EDO87143.1| AMP-binding enzyme [Burkholderia pseudomallei 406e]
gi|385353264|gb|EIF59619.1| acyl-CoA synthetase [Burkholderia pseudomallei 1258a]
gi|385353745|gb|EIF60062.1| acyl-CoA synthetase [Burkholderia pseudomallei 1258b]
Length = 553
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 259/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P I+ P +
Sbjct: 102 RLDVASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLAIVSVADAMPADPARFPAALD 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S+L++W +P
Sbjct: 162 YEAFLAGGDPAYAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D + +I+H VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRHERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TEE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELRDGMSA--TEEEIIAHCRLLLAAYKIPKTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|332560070|ref|ZP_08414392.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides WS8N]
gi|332277782|gb|EGJ23097.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides WS8N]
Length = 549
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/446 (43%), Positives = 256/446 (57%), Gaps = 23/446 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD VS +L H +KLL D LA A + P+L+ D A SP+
Sbjct: 103 RLDLDTVSYILEHGGAKLLLCDTAFLKLAKDACARLEGKA----PILVEVCDREAGFSPS 158
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G+P WV PE EW+ +ALNYTSGTT PKGVV+ HRG ++ T + I
Sbjct: 159 GEVLEYEELMARGNPWAPWVMPEDEWESIALNYTSGTTGRPKGVVYHHRGAYLSTYGNAI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ PV+L +P+FH NGW ++W + +GGT +C R + IY+ I GVTH G
Sbjct: 219 AWRMQLYPVYLTIVPLFHCNGWCHTWMVPMLGGTVVCCRDITAKAIYAAIADEGVTHFGG 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN L ++ + D+ V++ T+GA PPAA L E LGF V+ YGLTE G
Sbjct: 279 APIVLNTLINAAPEDRRSFDQVVEVFTAGAPPPAATLAAIEPLGFNVTQVYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C WK +W+ A ERA LKAR GV L + VH G + D GEI R
Sbjct: 339 TECIWKPEWDETAGEERAALKARTGVAMATLEGAE-VHDTHGQPIPRDTVHLGEIAMRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GY K+ E ++ RD WF +GDI H DGY++I DR+KD+IISGGEN+SS EVE
Sbjct: 398 MVMKGYYKNPEATAEAFRDG-WFRSGDIAFQHPDGYIKITDRAKDIIISGGENVSSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
V+ +PA++ A+VA+ D+ WG+ PCAFV LK ++ TEE II F R RL + K
Sbjct: 457 GVIAHHPAVSLCAVVAKPDERWGEVPCAFVELK--RGRQATEEEIIAFARERLAGFKTPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLREIVN 436
VI ELPKT+TGKIQKF LR +
Sbjct: 515 QVIF-CELPKTSTGKIQKFELRAVAK 539
>gi|126461031|ref|YP_001042145.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17029]
gi|221641100|ref|YP_002527362.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides KD131]
gi|429208505|ref|ZP_19199756.1| AMP-dependent synthetase and ligase [Rhodobacter sp. AKP1]
gi|126102695|gb|ABN75373.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17029]
gi|221161881|gb|ACM02861.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides KD131]
gi|428188494|gb|EKX57055.1| AMP-dependent synthetase and ligase [Rhodobacter sp. AKP1]
Length = 549
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 196/446 (43%), Positives = 256/446 (57%), Gaps = 23/446 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD VS +L H +KLL D LA A + P+L+ D A SP+
Sbjct: 103 RLDLDTVSYILEHGGAKLLLCDTAFLKLAKDACARLEGKA----PILVEVCDREAGFSPS 158
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G+P WV PE EW+ +ALNYTSGTT PKGVV+ HRG ++ T + I
Sbjct: 159 GEVLEYEDLMDRGNPWAPWVMPEDEWESIALNYTSGTTGRPKGVVYHHRGAYLSTYGNAI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ PV+L +P+FH NGW ++W + +GGT +C R + IY+ I GVTH G
Sbjct: 219 AWRMQLYPVYLTIVPLFHCNGWCHTWMVPMLGGTVVCCRDITAKAIYAAIADEGVTHFGG 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN L ++ + D+ V++ T+GA PPAA L E LGF V+ YGLTE G
Sbjct: 279 APIVLNTLINAAPEDRRSFDQVVEVFTAGAPPPAATLAAIEPLGFNVTQVYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C WK +W+ A ERA LKAR GV L + VH G + D GEI R
Sbjct: 339 TECIWKPEWDETAGEERAALKARTGVAMATLEGAE-VHDTHGQPIPRDTVHLGEIAMRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GY K+ E ++ RD WF +GDI H DGY++I DR+KD+IISGGEN+SS EVE
Sbjct: 398 MVMKGYYKNPEATAEAFRDG-WFRSGDIAFQHPDGYIKITDRAKDIIISGGENVSSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
V+ +PA++ A+VA+ D+ WG+ PCAFV LK ++ TEE II F R RL + K
Sbjct: 457 GVIAHHPAVSLCAVVAKPDERWGEVPCAFVELK--RGRQATEEEIIAFARERLAGFKTPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLREIVN 436
VI ELPKT+TGKIQKF LR +
Sbjct: 515 QVIF-CELPKTSTGKIQKFELRAVAK 539
>gi|406890821|gb|EKD36612.1| hypothetical protein ACD_75C01439G0001 [uncultured bacterium]
Length = 425
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 179/422 (42%), Positives = 254/422 (60%), Gaps = 21/422 (4%)
Query: 23 LFVDYQSSPLALAALSLFP----------SNTILPKPVLIHDDVSATSSPTVGHPNFKWV 72
+FVD Q + L L P + LP ++ A SSPT +
Sbjct: 1 MFVDNQLASSILPVLGELPEVRFFVNICDAAADLPLAGEEYEAFLAASSPTA-----PAI 55
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHEN 132
+ E+ +NYTSGTT PKGV++ HRG ++ + + + + V+LWTLPMFH N
Sbjct: 56 DIDDEYQVATINYTSGTTGRPKGVMYHHRGAYLNALGEIQEAGMMGDAVYLWTLPMFHCN 115
Query: 133 GWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTK--PLD 190
GW ++W + AVGGT++CLR+V+ I+ +I V+H+C A +L M+ S P K L
Sbjct: 116 GWCFTWAVTAVGGTHVCLRQVEASAIFRLIMTEKVSHLCAAPTILIMMVSYPEAKHLQLH 175
Query: 191 RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARL 250
RP+ ILT+GA P V+ + E+LG ++H YGLTE G CA + W+++A E A++
Sbjct: 176 RPLTILTAGAPPSPTVIEQIEALGAAITHVYGLTEVYGPHSVCARQDSWSSMAREELAKI 235
Query: 251 KARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDN 310
K+RQGV + MDVV T V DG++ GEIV R ++MLGY KD++ ++ +
Sbjct: 236 KSRQGVAYVTALYMDVVDMVTMQPVPRDGKTMGEIVMRGNNVMLGYYKDEQATTDAFK-G 294
Query: 311 DWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDK 370
WF++GD+ V+H DGY++I DR KD+IISGGENISS E+E+V+Y +P + EVA+V+ D
Sbjct: 295 GWFHSGDLAVMHPDGYVQIMDRGKDIIISGGENISSIELENVIYRHPKVQEVAVVSSPDP 354
Query: 371 FWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFV 430
WG+ P AFV+ K PT E II+FC+A L + A K V+ ELPKTATGKI KF
Sbjct: 355 KWGEVPKAFVTPK--PGTNPTVEEIIDFCKANLARFKAPKEVVF-CELPKTATGKITKFT 411
Query: 431 LR 432
LR
Sbjct: 412 LR 413
>gi|330820564|ref|YP_004349426.1| AMP-binding enzyme [Burkholderia gladioli BSR3]
gi|327372559|gb|AEA63914.1| AMP-binding enzyme [Burkholderia gladioli BSR3]
Length = 551
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 191/442 (43%), Positives = 260/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD V +L H E+KLL VD + + +A A P I+ + D ++ T
Sbjct: 102 RLDAASVLFMLRHGEAKLLIVDTEYAEVARRAAEELPGLRIVCVADAMPADPASFGGATD 161
Query: 64 ------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G P+ W P EW +ALNYTSGTT PKGVV+ HRG ++ +S+L++W +P
Sbjct: 162 YDAFLAGGDPDTPWAPPADEWQAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ GVTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAIAARAGVNVCLRKFDPRTVFELIRREGVTHYSGAPIVH 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
L+++P+ ++ V +GA+P AV+ + +S+GF + H YGLTE G CA
Sbjct: 282 GALANAPAEWRAGIEHRVHAQVAGAAPAPAVIAKMKSIGFDLMHVYGLTEIYGPASVCAT 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ W L + E A+ ARQGVR A V+ P+T SV DG++ GEI+FR M G
Sbjct: 342 QQHWAELPEEELAQRTARQGVRYHLQAGATVLDPDTMASVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPRATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ + + +E I+ CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELREGM--QASEAEILAHCRTLLAGYKMPKAVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR +V +
Sbjct: 518 GELPKTSTGKIQKFQLRTLVRS 539
>gi|119383856|ref|YP_914912.1| acyl-CoA synthetase [Paracoccus denitrificans PD1222]
gi|119387315|ref|YP_918349.1| acyl-CoA synthetase [Paracoccus denitrificans PD1222]
gi|119373623|gb|ABL69216.1| AMP-dependent synthetase and ligase [Paracoccus denitrificans
PD1222]
gi|119377890|gb|ABL72653.1| AMP-dependent synthetase and ligase [Paracoccus denitrificans
PD1222]
Length = 551
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 187/445 (42%), Positives = 262/445 (58%), Gaps = 29/445 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAAL--------------SLFPSNTILPK-- 48
R D V+ L H+ES++L VD + S +A AL + +P + PK
Sbjct: 102 RSDPATVAFQLDHAESRVLIVDREFSAMAAEALALAGVRPLVVDFDDAEYPDDAPHPKGE 161
Query: 49 PV--LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
P+ L ++ + A G P+F P EWD ++LNYTSGTT +PKGVV+ HRG ++
Sbjct: 162 PIGSLDYEQLLAE-----GDPDFAATPPGDEWDAISLNYTSGTTGNPKGVVYHHRGAALM 216
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
++++I + PV+LWTLPMFH NGW + W + GT +CLR V I+ I HG
Sbjct: 217 ALNNVIHAGMGRHPVYLWTLPMFHCNGWCFPWTVPVQAGTQVCLRWVRAGAIFDAIADHG 276
Query: 167 VTHICGALVVLNMLSSSPSTKPLDRPVKIL--TSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH+CGA +V++ L ++ + + P ++ T+ A PP VL GF V+H YGLT
Sbjct: 277 VTHLCGAPIVMSTLLNAAADRKRGFPQQVTFNTAAAPPPETVLQAMAKAGFGVTHLYGLT 336
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G V W W+ L + +A KARQGVR + L ++ V+ PET V DG++ GE
Sbjct: 337 ETYGPAVVNEWNPGWDGLPPSGQAARKARQGVRYLSLDELAVMDPETLQPVPADGRTLGE 396
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
++FR +M GYLK+ E ++ WF++GD+ V+H DGY+++KDRSKD+IISGGENI
Sbjct: 397 VMFRGNVVMKGYLKNPEATAAAFA-GGWFHSGDLAVMHPDGYVQLKDRSKDIIISGGENI 455
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS EVE LY +PA+ A+VA + WG+ PCAFV L+ + TE +I CRA L
Sbjct: 456 SSIEVEEQLYRHPAVALCAVVAMPSEKWGETPCAFVELR--EGGEETEPGLIAHCRAGLA 513
Query: 405 HYMAHKSVIIEDELPKTATGKIQKF 429
Y V+ LPKT+TGKIQKF
Sbjct: 514 GYKCPSRVVF-GPLPKTSTGKIQKF 537
>gi|255263036|ref|ZP_05342378.1| AMP-dependent synthetase and ligase [Thalassiobium sp. R2A62]
gi|255105371|gb|EET48045.1| AMP-dependent synthetase and ligase [Thalassiobium sp. R2A62]
Length = 541
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 181/438 (41%), Positives = 258/438 (58%), Gaps = 15/438 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF----PSNTILPKPVL----IHDDV 56
RLD V+ + H +K++ D Q PL + A++ P +P PV + + +
Sbjct: 103 RLDVDTVAYIFDHGGAKVVITDSQFLPLTMEAIAQMEGPAPLVIEVPDPVAGVPGLGEQM 162
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
G +F+W+ P EW+ +ALNYTSGTT PKGVV+ HRG +++T+ ++I WR+
Sbjct: 163 DYEDFLLAGDTDFEWIMPADEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRM 222
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P F+ +P+FH NGW+++W M +GGT +C R + IY I GVTH GA +V
Sbjct: 223 TLHPRFMAIVPLFHCNGWNHTWMMPVLGGTVVCCRDITAAAIYDGIADRGVTHFGGAPIV 282
Query: 177 LNMLSSS--PSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
LNM+ ++ K D V++ T+GA P A L +GF ++ YGLTET G V C
Sbjct: 283 LNMIVNAVDGDRKTFDHTVEVFTAGAPPAPATLAAIGEMGFNITQVYGLTETYGHVTECI 342
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W W+TL E++ +KARQGV + D+ VV E V D Q+QGEIV R S+M
Sbjct: 343 WNDAWDTLHQEEQSSIKARQGVAFPMMEDVTVVD-EQAQQVPMDAQTQGEIVMRGNSVMK 401
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GY K+ E ++ N +F++ D+ + H DGY++I DR+KD+IISGGENISS EVE L
Sbjct: 402 GYYKNPEATTKAFA-NGYFHSEDLAIQHPDGYIQIADRAKDIIISGGENISSVEVEGALM 460
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ A+VA+ D WG+ PCAF+ LK TE +I + RL + K+V+
Sbjct: 461 HHPAVLLCAVVAKPDDKWGETPCAFIELK--DGATATEAEMIAHTKTRLASFKCPKTVVF 518
Query: 415 EDELPKTATGKIQKFVLR 432
+ ELPKT+TGKIQKF LR
Sbjct: 519 Q-ELPKTSTGKIQKFELR 535
>gi|408418969|ref|YP_006760383.1| AMP-dependent synthetase and ligase [Desulfobacula toluolica Tol2]
gi|405106182|emb|CCK79679.1| AMP-dependent synthetase and ligase [Desulfobacula toluolica Tol2]
Length = 536
Score = 328 bits (841), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 264/442 (59%), Gaps = 23/442 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL ++ ++ HS++K +F D + +A++S + LPK + S +
Sbjct: 94 RLSANEIAYIIDHSDAKAVFADNEFGS-TVASIS-----SSLPKVGTYVNICDLDDSKPL 147
Query: 65 GHPNFKWV------QP-----ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
P+++ +P E D + +NYTSGTT PKGV++ HRG ++ + L++
Sbjct: 148 DGPDYETFLASGSEEPVELAVTDERDVITINYTSGTTGQPKGVMYHHRGAYLNAIGELLE 207
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
++I V+LWTLPMFH NGW ++W + A+G T++CLRKV IY++I G+TH+C A
Sbjct: 208 FKISPDSVYLWTLPMFHCNGWCFTWAITAMGATHVCLRKVVPEEIYNIIDSKGITHLCAA 267
Query: 174 LVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+L +S+ L ++I+T+GA P V+ ES+G + SYGLTE G
Sbjct: 268 PTILISMSAYARENRLTLSGNLEIMTAGAPPAPTVIQNMESIGANILQSYGLTEVFGPHS 327
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+ +W+ L E+ARLKARQGV I MDVV ET V DG++ GEIV R +
Sbjct: 328 ICRWQPRWDDLDPFEKARLKARQGVPYIVAQHMDVVDSETMEPVPRDGKTMGEIVMRGNN 387
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+MLGY KD E ++ R WF++GD+ V+H D Y++I DR KD+IISGGENIS+ E+E+
Sbjct: 388 VMLGYYKDIESTNDAFR-GGWFHSGDLAVMHPDNYIQIMDRQKDIIISGGENISTVEIEN 446
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VL+ +P + EVA++ D WG+ P AF++L + +P E IIEFCR +L + A K
Sbjct: 447 VLFTHPDVLEVAVIPVPDPKWGEVPKAFIAL--QNGTQPAAEDIIEFCRTKLARFKAPKY 504
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V ELPKTATGK QKF LRE
Sbjct: 505 VEF-GELPKTATGKTQKFKLRE 525
>gi|167578394|ref|ZP_02371268.1| acyl-CoA synthetase [Burkholderia thailandensis TXDOH]
Length = 553
Score = 328 bits (841), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 188/442 (42%), Positives = 259/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P I+ P +
Sbjct: 102 RLDIASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLAIVSVADAMPADPARFPAAID 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFLAGGDPTYTWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKLVLDLIRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ ++ V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIEHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V D ++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADAETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TEE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELREGMSA--TEEEIIAHCRLLLAAYKIPKTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|171058759|ref|YP_001791108.1| AMP-dependent synthetase and ligase [Leptothrix cholodnii SP-6]
gi|170776204|gb|ACB34343.1| AMP-dependent synthetase and ligase [Leptothrix cholodnii SP-6]
Length = 556
Score = 328 bits (840), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/450 (40%), Positives = 262/450 (58%), Gaps = 25/450 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVL---------IHDD 55
RLD ++ ++H E+ +L D + +PL AL+L S V+ +H+
Sbjct: 102 RLDAALLAWQMNHCEATVLITDSEFAPLMDKALALLKSQHGRELRVIDVCDSEFTGVHEH 161
Query: 56 VSATSSPTV--GH-PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ + H P + P EWD +A++YTSGTT PKGVV HRG ++ V + +
Sbjct: 162 LGTHEYEDLLAAHVPLHRLEGPADEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVCNSV 221
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P+ PV+LWTLPMFH NGW + W +AA+GGT++CLRKVD I ++ H V H C
Sbjct: 222 TWTMPHFPVYLWTLPMFHCNGWCFPWTIAALGGTHVCLRKVDARAILDAMREHAVDHYCA 281
Query: 173 ALVVLNMLSSSPS-------TKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
A +V ++L ++P+ T P R ++ L +GA+PPAA++ + +GF ++H YGL
Sbjct: 282 APIVHSLLINAPAELREGLGTDPTGSSRKIRGLVAGAAPPAAMIEGMQRIGFDITHVYGL 341
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TE G +W E+ARL RQGVR + M V+ PET DGQ+ G
Sbjct: 342 TEVYGPASVAVKTPEWADADLGEQARLNGRQGVRYVLQEGMTVMDPETMTETPADGQTMG 401
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EI+FR +M GYLK+ + + + + WF+TGD+ V+ D Y++I+DRSKDVIISGGEN
Sbjct: 402 EIMFRGNIVMKGYLKNPKATQASL-EGGWFHTGDLAVMEPDRYVKIRDRSKDVIISGGEN 460
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL 403
ISS EVE LY +PA+ A+VA+ D WG+ P A+V L + + T +I C+A L
Sbjct: 461 ISSIEVEDALYRHPAVTACAVVAKPDPKWGETPLAYVELAY--GAQVTAPELIAHCKALL 518
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y + + E +PKT+TGKIQKF LRE
Sbjct: 519 AGYKVPREIRFE-PIPKTSTGKIQKFQLRE 547
>gi|89055470|ref|YP_510921.1| AMP-dependent synthetase/ligase [Jannaschia sp. CCS1]
gi|88865019|gb|ABD55896.1| AMP-dependent synthetase and ligase [Jannaschia sp. CCS1]
Length = 543
Score = 327 bits (839), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 190/444 (42%), Positives = 260/444 (58%), Gaps = 23/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ +L H E+KL+ VD Q P+ + A+ P+LI + P
Sbjct: 103 RLDVSTIAYILDHGEAKLVLVDTQFLPVVMDAVEAMDGT----PPILIECPSAVAGYPAT 158
Query: 65 G-HPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G H ++ W P+ EW+ ++LNYTSGTT PKGVV+ HRG ++IT+ + I
Sbjct: 159 GDHTIYEDLLREGDTDAPWHMPDDEWESISLNYTSGTTGRPKGVVYHHRGAYLITMGTPI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ P +L +PMFH N W ++W M AVGGT +C R + IY I GVTH+ G
Sbjct: 219 SWRMTLYPKYLTIVPMFHCNNWCHTWMMPAVGGTLVCCRDITASAIYDAIADEGVTHMGG 278
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML ++ + + D V++ T+GA P AA L E++GF V+ YGLTE+ G
Sbjct: 279 APIVLNMLVNAKDSDRRDFDHTVEVFTAGAPPAAATLAAIETMGFHVTQVYGLTESYGHA 338
Query: 231 VSCAWK-SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C W+ S W+ L RA +KARQGV + + V+ P+T + DG GEI+ R
Sbjct: 339 TECVWQDSDWSALDAAARAGIKARQGVALPNMDHITVMDPDTMEQIPMDGAVTGEIMMRG 398
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
S M GY K+ + ++ +F+TGDI V H D Y++I DR+KD+IISGGENISS EV
Sbjct: 399 NSTMKGYYKNPDATAEAFA-GGYFHTGDIAVQHPDSYIQIADRAKDIIISGGENISSVEV 457
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VL +PA+ A+VA+ D WG+ PCAFV LK + TE II F RARL +
Sbjct: 458 EGVLMHHPAVLLCAVVAKPDDKWGEIPCAFVELK--EGAEATEAEIIAFARARLAGFKTP 515
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K V+ ELPKT+TGKIQKF LR+
Sbjct: 516 KRVVFA-ELPKTSTGKIQKFELRK 538
>gi|444379420|ref|ZP_21178600.1| 3-methylmercaptopropionyl-CoA ligase (DmdB) [Enterovibrio sp. AK16]
gi|443676424|gb|ELT83125.1| 3-methylmercaptopropionyl-CoA ligase (DmdB) [Enterovibrio sp. AK16]
Length = 542
Score = 327 bits (839), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 177/442 (40%), Positives = 264/442 (59%), Gaps = 16/442 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF---PSNTILPKPVLIHDDVSATSS 61
RL+ ++ L H+E+K+L VD + +A AL L P + PV + + +S
Sbjct: 102 RLEAATIAYQLDHAEAKVLIVDQEFLSVAKDALELAERSPIVIVYSDPVWVEETKETPNS 161
Query: 62 P--------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
+ G +F+W+ PE EWD +++NYTSGTT +PKGVV HRG +++ + ++
Sbjct: 162 TYQDYETFISQGDKSFRWLMPEDEWDAISINYTSGTTGNPKGVVCHHRGAYLLALGNVFT 221
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+P +LWTLPMFH NGW + W M+A+ GT++CLR+V I+ + H VTH+CGA
Sbjct: 222 AEMPKYSTYLWTLPMFHCNGWCFPWTMSAICGTHVCLRQVRAEPIWHALTEHKVTHLCGA 281
Query: 174 LVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
+V++++ S T+PL V T+ A PP + L + + GF V+H YGL E G V
Sbjct: 282 PIVMDIILSD-QTQPLSDKVAFFTAAAPPPESTLAKMQQAGFEVTHLYGLAEVYGPAVVN 340
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
W +W+ L ++A+LKARQGVR + L +DV++PET V DG++ GE++FR +M
Sbjct: 341 EWHDEWDDLPIQDQAKLKARQGVRYLPLEALDVMNPETMEPVPADGKTIGEVMFRGNVVM 400
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY K+ + WF++GD+ V + DGY+++KDRSKD+IISGGENISS E+E VL
Sbjct: 401 KGYFKNLTATESAFA-GGWFHSGDLAVKYPDGYIQLKDRSKDIIISGGENISSIEIEDVL 459
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +PA+ A+VA ++ WG+ P AFV L K +E+ + +C + + K
Sbjct: 460 YKHPAVAVAAVVACPNEKWGEVPFAFVELG--EGKVVSEQELKTWCSNHMAGFKVPKHFA 517
Query: 414 IEDELPKTATGKIQKFVLREIV 435
+P+T TGKIQKF LRE V
Sbjct: 518 FA-MIPRTPTGKIQKFQLREQV 538
>gi|126443941|ref|YP_001062075.1| acyl-CoA synthetase [Burkholderia pseudomallei 668]
gi|126223432|gb|ABN86937.1| AMP-binding enzyme [Burkholderia pseudomallei 668]
Length = 553
Score = 327 bits (838), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 258/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P I+ P +
Sbjct: 102 RLDVASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLAIVSVADAMPADPARFPAALD 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S+L++W +P
Sbjct: 162 YEAFLAGGDPAYAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D + +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TEE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELREGMSA--TEEEIIAHCRLLLAAYKIPKTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|357039971|ref|ZP_09101762.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
gi|355357334|gb|EHG05110.1| o-succinylbenzoate--CoA ligase [Desulfotomaculum gibsoniae DSM
7213]
Length = 531
Score = 327 bits (838), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 180/440 (40%), Positives = 262/440 (59%), Gaps = 24/440 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + V+ +L HS SK+LFVD + + + +S I+ ++ S
Sbjct: 92 RLAPQEVAYILQHSGSKMLFVDTEFAGVIKPIMSEIGDVKIV--------NICDVESKVF 143
Query: 65 GHPNFKW---VQPES-------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
P+++ V P+ E + LNYTSGTT PKGV++ HRG ++ + L+++
Sbjct: 144 DGPDYEEFISVDPDEFTFGVDDELQHITLNYTSGTTGKPKGVLYTHRGAYLNALGELLEF 203
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
+ ++LWTLPMFH NGW ++W + A+GGT++CLRKV IY I+ H V+H+ A
Sbjct: 204 QCNPSTIYLWTLPMFHCNGWCFTWAITAIGGTHVCLRKVVPDEIYKQIQKHEVSHLSAAP 263
Query: 175 VVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+VL +++ + + + I+T+GA P V+ ES+G V +YGLTE G
Sbjct: 264 IVLIGMANYKGIGDVQMKKHLNIMTAGAPPSPTVIKNMESVGCTVIQTYGLTEVYGPHSV 323
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C W+ QWN LA +RA++KARQGV + MDVV+P + + HDG++ GEIV R ++
Sbjct: 324 CEWQPQWNDLAIEDRAKIKARQGVPYVTATYMDVVNPASMEPMPHDGETIGEIVMRGNNV 383
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GY E + R WF++GD+ V H +GY+EIKDR KDV ISGGENIS+ EVE+V
Sbjct: 384 MAGYYNQPEDTEQAFR-GGWFHSGDLAVTHPNGYIEIKDRMKDVTISGGENISTVEVENV 442
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
+Y +P + EVA+VA + WG+ P AFV+LK S PT E II+FC+ R+ + A K +
Sbjct: 443 IYQHPDVLEVAVVAMPHEKWGEVPKAFVTLKEGTS--PTAEDIIKFCQERIARFKAPKEI 500
Query: 413 IIEDELPKTATGKIQKFVLR 432
ELPKT+TGKI K+ LR
Sbjct: 501 EF-GELPKTSTGKIMKYKLR 519
>gi|400286554|ref|ZP_10788586.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PAMC 21119]
Length = 554
Score = 327 bits (837), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 179/449 (39%), Positives = 257/449 (57%), Gaps = 27/449 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ L HSE+K+L +D + + A FP+ ++IH +A
Sbjct: 106 RLDINALTFCLQHSEAKVLILDSEFADYAEIIDETFPN------LIVIHATDNAIDVERF 159
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +++ W +P EWD +ALNYTSGTT PKGVV+ HRG + VS+++D
Sbjct: 160 GKMSYEALIASSDSLDNWEKPADEWDAIALNYTSGTTGKPKGVVYHHRGATLNAVSNILD 219
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P++LWTLP+FH NGW + W +A G N+CLR +D +I +I H V+H C A
Sbjct: 220 WDMPKHPMYLWTLPLFHCNGWCFPWTIAERAGVNVCLRNIDADLILQLIAKHQVSHYCSA 279
Query: 174 LVVLNMLS-SSPSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VV NM++ P K + VK +GA P +L E++GF +SH YGLTE G V
Sbjct: 280 PVVHNMIAGGKPEYKEAITHTVKGWVAGAPPSETMLAAMEAMGFHISHVYGLTEVYGPVT 339
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA + +W++L RA+ K+RQGV + + DV T V DG+ GE+ R
Sbjct: 340 VCAEQEEWDSLDVAGRAQKKSRQGVTSHLMTGFDVFKQGTTEPVAADGEEMGELALRGNM 399
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK ++ + D+ WF TGD+GV + DGY++I DR KD+IISGGENISS EVE+
Sbjct: 400 VMKGYLKSRKATEEAFADS-WFRTGDLGVKYPDGYIKIMDRLKDIIISGGENISSIEVEN 458
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT--EEAIIEFCRARLPHYMAH 409
VLY P I A+VA WG+ P AF+ E+ + T + + E C+ L +
Sbjct: 459 VLYKMPEIQSCAVVAAPHDKWGEVPVAFI----EIHEGSTLQRDTVTEHCKQHLARFKVP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K ++ E+PKT+TGK+QKF LR+ ++
Sbjct: 515 KYIVFA-EIPKTSTGKVQKFELRQAAKSL 542
>gi|124383087|ref|YP_001023964.1| acyl-CoA synthetase [Burkholderia mallei NCTC 10229]
gi|126446078|ref|YP_001078658.1| acyl-CoA synthetase [Burkholderia mallei NCTC 10247]
gi|254356608|ref|ZP_04972883.1| AMP-binding enzyme [Burkholderia mallei 2002721280]
gi|124291107|gb|ABN00377.1| AMP-binding domain protein [Burkholderia mallei NCTC 10229]
gi|126238932|gb|ABO02044.1| AMP-binding enzyme [Burkholderia mallei NCTC 10247]
gi|148025635|gb|EDK83758.1| AMP-binding enzyme [Burkholderia mallei 2002721280]
Length = 553
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 258/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P I+ P +
Sbjct: 102 RLDVASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLAIVSVADAMPADPARFPAALD 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S+L++W +P
Sbjct: 162 YEAFLAGGDPAYAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D + +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TEE II CR L Y K+V
Sbjct: 461 HPAVEVAAVVALPDPKWGEVPCAFVELRDGMSA--TEEEIIAHCRLLLAAYKIPKTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|389581533|ref|ZP_10171560.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfobacter
postgatei 2ac9]
gi|389403168|gb|EIM65390.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Desulfobacter
postgatei 2ac9]
Length = 536
Score = 327 bits (837), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 180/442 (40%), Positives = 266/442 (60%), Gaps = 23/442 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL +S +++HS++K++ D + + S+ P T + + I D S P
Sbjct: 94 RLSANEMSYIINHSDAKVVVADNEFGNMLS---SVVPELTAVKAFINICD--IDDSMPLD 148
Query: 65 GHPNFKWVQPESEWDP-----------MALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P ++ +S DP +ALNYTSGTT PKGV++ HRG ++ + L++
Sbjct: 149 G-PEYERFLADSPTDPVALVIEDEREVLALNYTSGTTGRPKGVMYHHRGAYLNALGELLE 207
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
++I +LWTLPMFH NGW ++WG+ A+G T++CLRKVD IY +I GVTH+C A
Sbjct: 208 FKINPDSKYLWTLPMFHCNGWCFTWGITAMGATHVCLRKVDPVEIYRIIAEVGVTHLCAA 267
Query: 174 LVVLNMLS--SSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+L +S + + L ++I+T+GA P V+ E++G ++ +YGLTE G
Sbjct: 268 PTILIGMSVFAKENNVRLSNSLEIMTAGAPPAPMVIQNMENIGANITQTYGLTEVFGPHS 327
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+ +W+ L+ RA +KARQGV I MDVV PET V DG + GEIV R +
Sbjct: 328 VCQWQDKWDDLSPMARAGIKARQGVAYIVAEHMDVVDPETMEPVPRDGTTMGEIVMRGNN 387
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+MLGY KD E S+ R WF++GD+ V+H D Y++I DR KD+IISGGENIS+ E+E+
Sbjct: 388 VMLGYYKDAEASTEAFR-GGWFHSGDLAVMHPDNYVQIMDRKKDIIISGGENISTVEIEN 446
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P + EVA+++ D+ WG+ P AF+ + + P + II +C+ ++ + A KS
Sbjct: 447 VLYTHPDVMEVAVISVPDEKWGEVPKAFIVPRAGTNPDPAQ--IIAYCKEKMARFKAPKS 504
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
+ LPKTATGK+QKF LRE
Sbjct: 505 IEF-GPLPKTATGKLQKFKLRE 525
>gi|53721757|ref|YP_110742.1| acyl-CoA synthetase [Burkholderia pseudomallei K96243]
gi|167722961|ref|ZP_02406197.1| acyl-CoA synthetase [Burkholderia pseudomallei DM98]
gi|167741946|ref|ZP_02414720.1| acyl-CoA synthetase [Burkholderia pseudomallei 14]
gi|167897582|ref|ZP_02484984.1| acyl-CoA synthetase [Burkholderia pseudomallei 7894]
gi|167922155|ref|ZP_02509246.1| acyl-CoA synthetase [Burkholderia pseudomallei BCC215]
gi|217419171|ref|ZP_03450678.1| AMP-binding enzyme [Burkholderia pseudomallei 576]
gi|237510291|ref|ZP_04523006.1| long-chain-fatty-acid--CoA ligase [Burkholderia pseudomallei
MSHR346]
gi|386864510|ref|YP_006277458.1| acyl-CoA synthetase [Burkholderia pseudomallei 1026b]
gi|418395753|ref|ZP_12969676.1| acyl-CoA synthetase [Burkholderia pseudomallei 354a]
gi|418535632|ref|ZP_13101375.1| acyl-CoA synthetase [Burkholderia pseudomallei 1026a]
gi|418555514|ref|ZP_13120209.1| acyl-CoA synthetase [Burkholderia pseudomallei 354e]
gi|52212171|emb|CAH38190.1| putative AMP-binding enzyme [Burkholderia pseudomallei K96243]
gi|217398475|gb|EEC38490.1| AMP-binding enzyme [Burkholderia pseudomallei 576]
gi|235002496|gb|EEP51920.1| long-chain-fatty-acid--CoA ligase [Burkholderia pseudomallei
MSHR346]
gi|385354779|gb|EIF61019.1| acyl-CoA synthetase [Burkholderia pseudomallei 1026a]
gi|385368499|gb|EIF73945.1| acyl-CoA synthetase [Burkholderia pseudomallei 354e]
gi|385373637|gb|EIF78649.1| acyl-CoA synthetase [Burkholderia pseudomallei 354a]
gi|385661638|gb|AFI69060.1| acyl-CoA synthetase [Burkholderia pseudomallei 1026b]
Length = 553
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 258/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P I+ P +
Sbjct: 102 RLDVASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLAIVSVADAMPADPARFPAALD 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S+L++W +P
Sbjct: 162 YEAFLAGGDPAYAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D + +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TEE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELRDGMSA--TEEEIIAHCRLLLAAYKIPKTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|53716930|ref|YP_106004.1| acyl-CoA synthetase [Burkholderia mallei ATCC 23344]
gi|67643326|ref|ZP_00442073.1| acyl-CoA synthase [Burkholderia mallei GB8 horse 4]
gi|121597408|ref|YP_990118.1| acyl-CoA synthetase [Burkholderia mallei SAVP1]
gi|167001481|ref|ZP_02267278.1| AMP-binding enzyme [Burkholderia mallei PRL-20]
gi|254174061|ref|ZP_04880723.1| AMP-binding enzyme [Burkholderia mallei ATCC 10399]
gi|254200855|ref|ZP_04907220.1| AMP-binding enzyme [Burkholderia mallei FMH]
gi|254204823|ref|ZP_04911176.1| AMP-binding enzyme [Burkholderia mallei JHU]
gi|52422900|gb|AAU46470.1| AMP-binding domain protein [Burkholderia mallei ATCC 23344]
gi|121225206|gb|ABM48737.1| AMP-binding domain protein [Burkholderia mallei SAVP1]
gi|147748467|gb|EDK55542.1| AMP-binding enzyme [Burkholderia mallei FMH]
gi|147754409|gb|EDK61473.1| AMP-binding enzyme [Burkholderia mallei JHU]
gi|160695107|gb|EDP85077.1| AMP-binding enzyme [Burkholderia mallei ATCC 10399]
gi|238524649|gb|EEP88081.1| acyl-CoA synthase [Burkholderia mallei GB8 horse 4]
gi|243062786|gb|EES44972.1| AMP-binding enzyme [Burkholderia mallei PRL-20]
Length = 553
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 258/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P I+ P +
Sbjct: 102 RLDVASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLAIVSVADAMPADPARFPAALD 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S+L++W +P
Sbjct: 162 YEAFLAGGDPAYAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D + +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TEE II CR L Y K+V
Sbjct: 461 HPAVEVAAVVALPDPKWGEVPCAFVELRDGMSA--TEEEIIAHCRLLLAAYKIPKTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|260904539|ref|ZP_05912861.1| long-chain-fatty-acid--CoA ligase [Brevibacterium linens BL2]
Length = 548
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 173/453 (38%), Positives = 263/453 (58%), Gaps = 33/453 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + V + +HS++KLL +D Q P L +T+ + ++ +D + +S V
Sbjct: 91 RLAAEEVRYICNHSQAKLLVIDTQLWPSVAPVLDGL--DTV--EAIVDVEDTTIAASAEV 146
Query: 65 GHPNF----------------------KWVQPESEWDPMALNYTSGTTSSPKGVVHCHRG 102
P+F W + E E +++NYTSGTT PKGV++ HRG
Sbjct: 147 ARPDFAAPSVTSLDEFLAGAEADTDELSW-RVEDERATLSINYTSGTTGRPKGVMYSHRG 205
Query: 103 LFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
++ + +I + V+LWTLPMFH NGW W +AA GGT +CLR+V +I+ +I
Sbjct: 206 AYLNALGEIIHSDHDEKSVYLWTLPMFHCNGWCTGWALAAAGGTQVCLREVRGDVIWDLI 265
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
H VTH+ GA V++ + ++ LDR V +GA+P ++ E+L F + H YG
Sbjct: 266 DRHEVTHLNGAPTVMSTVINAEQAHSLDRAVTATMAGAAPSPTLIWEMEALNFQIVHVYG 325
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG---MSVKHDG 279
LTE+ G C W+ W++L D RARL+ARQGV + +V E+G + V DG
Sbjct: 326 LTESYGPYTVCEWQDSWDSLDDKSRARLRARQGVGMVQADQARIVALESGDELIDVPADG 385
Query: 280 QSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIIS 339
Q+ GEIV R ++M GY +D++ ++ + WF++GD+GV+H DGY+E++DRSKD+I+S
Sbjct: 386 QTIGEIVMRGNNVMKGYFRDEDATAKAFQ-GGWFHSGDLGVMHEDGYIELRDRSKDIIVS 444
Query: 340 GGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFC 399
GGENIS+ E+E + +PA+ EVA++ D WG+RP AF+ ++ TE +I+
Sbjct: 445 GGENISTVEIEQAISSHPAVLEVAVIGVPDDKWGERPKAFIIVR--EGSAVTEAEVIDHV 502
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
R ++ Y A + V I + LPKT+TGKIQKF LR
Sbjct: 503 RTQIAKYKAPREVEIVEALPKTSTGKIQKFELR 535
>gi|71064760|ref|YP_263487.1| AMP-dependent synthetase/ligase [Psychrobacter arcticus 273-4]
gi|71037745|gb|AAZ18053.1| probable AMP-dependent synthetase and ligase family protein
[Psychrobacter arcticus 273-4]
Length = 554
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/447 (39%), Positives = 255/447 (57%), Gaps = 23/447 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD +S L HSE+K+L +D + + A FP+ ++IH +A
Sbjct: 106 RLDINALSFCLQHSEAKVLILDSEFAEHAEMIDETFPN------LIVIHATDAAVDIERF 159
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +++ W +P EWD +ALNYTSGTT PKGVV+ HRG + VS+++D
Sbjct: 160 GQMSYEELIASADSLDNWEKPTDEWDAIALNYTSGTTGKPKGVVYHHRGATLNAVSNILD 219
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P++LWTLP+FH NGW + W +A G N+CLRK+D +I +I H V+H C A
Sbjct: 220 WDMPKHPMYLWTLPLFHCNGWCFPWTIAERAGVNVCLRKIDADLILQLIAKHKVSHYCSA 279
Query: 174 LVVLNMLS-SSPSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VV NM++ P K ++ VK +GA P +L E++GF +SH YGLTE G V
Sbjct: 280 PVVHNMIAGGKPEYKEAINHEVKGWVAGAPPSETMLAAMEAMGFHISHVYGLTEVYGPVT 339
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA + +W TL RA+ K+RQGV + ++ ++ T V DG+ GE+ R
Sbjct: 340 ICAEQQEWATLDVAGRAQKKSRQGVTSHLMSGFELFKQGTTEPVAADGKEMGELALRGNM 399
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK ++ + D WF TGD+GV + DGY++I DR KD+IISGGENISS EVE+
Sbjct: 400 VMKGYLKSRKATEEAFTDG-WFRTGDLGVKYPDGYIKIMDRLKDIIISGGENISSIEVEN 458
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY P I A+VA WG+ P AF+ + + ++ C+ L + K
Sbjct: 459 VLYKMPEIQSCAVVAAPHDKWGEVPVAFIEI--HAGSTLQRDNVMAHCKQHLASFKMPKY 516
Query: 412 VIIEDELPKTATGKIQKFVLREIVNAV 438
+I E+PKT+TGK+QKF LR+ ++
Sbjct: 517 IIFA-EIPKTSTGKVQKFELRQAAKSL 542
>gi|134278936|ref|ZP_01765649.1| AMP-binding enzyme [Burkholderia pseudomallei 305]
gi|167905933|ref|ZP_02493138.1| acyl-CoA synthetase [Burkholderia pseudomallei NCTC 13177]
gi|134249355|gb|EBA49436.1| AMP-binding enzyme [Burkholderia pseudomallei 305]
Length = 553
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 258/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P I+ P +
Sbjct: 102 RLDVASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLAIVSVADAMPADPARFPAALD 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S+L++W +P
Sbjct: 162 YEAFLAGGDPAYAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D + +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TEE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELRDGMSA--TEEEIIAHCRLLLAAYKIPKTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|167839301|ref|ZP_02465985.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|424905271|ref|ZP_18328778.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
gi|390929665|gb|EIP87068.1| acyl-CoA synthetase [Burkholderia thailandensis MSMB43]
Length = 553
Score = 326 bits (836), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 188/442 (42%), Positives = 259/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P TI+ P +
Sbjct: 102 RLDIASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLTIVSVADAMPADPARFPAAID 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S++++W +P
Sbjct: 162 YEAFLAGGDPACTWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNILEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D ++ +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKLVLDLIRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNICMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ ++ TEE II CR L Y ++V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELREGMTA--TEEEIIAHCRLLLAAYKIPRTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|254183102|ref|ZP_04889694.1| AMP-binding enzyme [Burkholderia pseudomallei 1655]
gi|184213635|gb|EDU10678.1| AMP-binding enzyme [Burkholderia pseudomallei 1655]
Length = 553
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 190/442 (42%), Positives = 258/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P I+ P +
Sbjct: 102 RLDVASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLAIVSVADAMPADPARFPAALD 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S+L++W +P
Sbjct: 162 YEAFLAGGDPAYVWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D + +I+ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELIRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TEE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELRDGMSA--TEEEIIAHCRLLLAAYKIPKTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|88811694|ref|ZP_01126948.1| acyl-CoA synthase [Nitrococcus mobilis Nb-231]
gi|88791085|gb|EAR22198.1| acyl-CoA synthase [Nitrococcus mobilis Nb-231]
Length = 532
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 179/440 (40%), Positives = 255/440 (57%), Gaps = 21/440 (4%)
Query: 7 DHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV-- 64
+ + ++ +L +++L D + + AL+L PS P V+ DD +
Sbjct: 94 EARTIAFILQDCGARVLLTDTEFAKTIEKALALLPS----PPLVIDVDDPQGGGGEGLGK 149
Query: 65 ---------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
G P F W P EW+ +ALNYT GTT++P G+V+ HR ++ VS ++ W
Sbjct: 150 LGYEALLAEGDPTFIWEPPPDEWEAIALNYTPGTTANPNGIVYHHRAAYLKAVSHVLVWG 209
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+ P++LWTLPMF NGW + W + A+ G ++CLR+ ++ I+ H V+H+C
Sbjct: 210 LAPHPIYLWTLPMFDCNGWCFPWTITAMAGVHVCLREARGEAVFEAIRRHRVSHLCATPA 269
Query: 176 VLN-MLSSSPSTKP--LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
VLN +L+ S +P D PVK++ A+P AAV+ E++G ++H YGLTE G
Sbjct: 270 VLNALLAVSVERRPGKFDHPVKVMAGAAAPSAAVVEGIEAMGMEITHVYGLTEAGGPAAV 329
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
CAW +WN ERARLKARQGVR L + V P T + V DG++ GEI R ++
Sbjct: 330 CAWHPEWNARPREERARLKARQGVRYPMLDGLMVADPHTLVPVPKDGRTIGEIFIRGNTV 389
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GY K + + D WF+TGD+ + H DGY+EIKDR+KD+I E SS E+ESV
Sbjct: 390 MKGYFKSAQATEEAF-DGGWFHTGDLAIWHPDGYMEIKDRAKDIITLDDEPSSSLEIESV 448
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L +PAI E A+VA+ D+ G+ PCAFV LK + + E IIEFCR + H M K+V
Sbjct: 449 LCRHPAIMEAAVVARMDEELGETPCAFVVLKPDAANVGATE-IIEFCRQHMAHSMVPKTV 507
Query: 413 IIEDELPKTATGKIQKFVLR 432
+ ELPKT+TGK+QKF LR
Sbjct: 508 VF-GELPKTSTGKVQKFKLR 526
>gi|76818203|ref|YP_337457.1| acyl-CoA synthetase [Burkholderia pseudomallei 1710b]
gi|126455744|ref|YP_001075029.1| acyl-CoA synthetase [Burkholderia pseudomallei 1106a]
gi|167819126|ref|ZP_02450806.1| acyl-CoA synthetase [Burkholderia pseudomallei 91]
gi|167827503|ref|ZP_02458974.1| acyl-CoA synthetase [Burkholderia pseudomallei 9]
gi|167848979|ref|ZP_02474487.1| acyl-CoA synthetase [Burkholderia pseudomallei B7210]
gi|167914244|ref|ZP_02501335.1| acyl-CoA synthetase [Burkholderia pseudomallei 112]
gi|226195244|ref|ZP_03790835.1| AMP-binding enzyme [Burkholderia pseudomallei Pakistan 9]
gi|242313950|ref|ZP_04812967.1| AMP-binding enzyme [Burkholderia pseudomallei 1106b]
gi|254189767|ref|ZP_04896276.1| AMP-binding enzyme [Burkholderia pseudomallei Pasteur 52237]
gi|254192816|ref|ZP_04899251.1| AMP-binding enzyme [Burkholderia pseudomallei S13]
gi|254263818|ref|ZP_04954683.1| AMP-binding enzyme [Burkholderia pseudomallei 1710a]
gi|403522310|ref|YP_006657879.1| acyl-CoA synthetase [Burkholderia pseudomallei BPC006]
gi|76582676|gb|ABA52150.1| AMP-binding domain protein [Burkholderia pseudomallei 1710b]
gi|126229512|gb|ABN92925.1| AMP-binding enzyme [Burkholderia pseudomallei 1106a]
gi|157937444|gb|EDO93114.1| AMP-binding enzyme [Burkholderia pseudomallei Pasteur 52237]
gi|169649570|gb|EDS82263.1| AMP-binding enzyme [Burkholderia pseudomallei S13]
gi|225933049|gb|EEH29045.1| AMP-binding enzyme [Burkholderia pseudomallei Pakistan 9]
gi|242137189|gb|EES23592.1| AMP-binding enzyme [Burkholderia pseudomallei 1106b]
gi|254214820|gb|EET04205.1| AMP-binding enzyme [Burkholderia pseudomallei 1710a]
gi|403077377|gb|AFR18956.1| acyl-CoA synthetase [Burkholderia pseudomallei BPC006]
Length = 553
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/442 (42%), Positives = 258/442 (58%), Gaps = 13/442 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL-------PKPVLIHDDVS 57
RLD + +L H E+K+L VD + + A A P I+ P +
Sbjct: 102 RLDVASMLFMLRHGEAKVLIVDTEYAEFAHRAALEVPGLAIVSVADAMPADPARFPAALD 161
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ G P + W P EW+ +ALNYTSGTT PKGVV+ HRG ++ +S+L++W +P
Sbjct: 162 YEAFLAGGDPAYAWTPPSDEWEAIALNYTSGTTGDPKGVVYHHRGAYLAAISNLLEWDMP 221
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW + W +AA G N+CLRK D + +++ VTH GA +V
Sbjct: 222 KHAVYLWTLPMFHCNGWCFPWAVAARAGVNVCLRKFDAKRVLELVRRERVTHYSGAPIVQ 281
Query: 178 NMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
+ ++++P+ + V +GA+P AV+ + + +GF ++H YGLTE G CA
Sbjct: 282 SAIANAPAEWRAGIAHEVHAFVAGAAPAPAVIAKMKEIGFDLTHVYGLTEVYGPATVCAK 341
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ W +L D E A+L ARQGVR A V+ P+T V DG++ GEI+FR M G
Sbjct: 342 QAHWASLPDDELAQLNARQGVRYHLQAGATVLDPDTMAPVPADGETLGEIMFRGNLCMKG 401
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
YLK+ + WF+TGD+GV+ DGY+ IKDR KD+IISGGENISS EVE LY
Sbjct: 402 YLKNPHATDEAFA-GGWFHTGDLGVLTPDGYIRIKDRRKDIIISGGENISSIEVEDALYR 460
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ A+VA D WG+ PCAFV L+ +S TEE II CR L Y K+V
Sbjct: 461 HPAVAVAAVVALPDPKWGEVPCAFVELRDGMSA--TEEEIIAHCRLLLAAYKIPKTVRF- 517
Query: 416 DELPKTATGKIQKFVLREIVNA 437
ELPKT+TGKIQKF LR V +
Sbjct: 518 GELPKTSTGKIQKFQLRAQVGS 539
>gi|254450797|ref|ZP_05064234.1| AMP-dependent synthetase and ligase [Octadecabacter arcticus 238]
gi|198265203|gb|EDY89473.1| AMP-dependent synthetase and ligase [Octadecabacter arcticus 238]
Length = 517
Score = 326 bits (835), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/439 (41%), Positives = 263/439 (59%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF----PSNTILPKPVL----IHDDV 56
RLD ++ + H E+K++ VD Q P+ + A+ P +P P+ I +
Sbjct: 81 RLDVDTIAYIFDHGEAKVVLVDSQFLPVCMQAIEAMEGAAPLVVEVPDPIAGVPEIGKQI 140
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ G PNF WV PE EW+ +ALNYTSGTT PKGVV+ HRG +++T+ + + WR+
Sbjct: 141 DYETFLAAGDPNFAWVLPEDEWESLALNYTSGTTGQPKGVVYHHRGAYLMTMGTPVTWRM 200
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P+FL +P+FH NGW+++W M +GGT +C R V IY+ I GVTH GA +V
Sbjct: 201 TLHPIFLTIVPLFHCNGWNHTWMMPMLGGTVVCCRDVSAAAIYAAIADEGVTHFGGAPIV 260
Query: 177 LNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
LN+L + S + D V++ T+GA P A L LGF V YGLTET G V C
Sbjct: 261 LNLLVNAKSEDRRDFDHTVEVFTAGAPPAPATLAAIGDLGFNVQQVYGLTETYGHVTECL 320
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W W+TL +++ ++ARQGV + D+ V+ + V DG++QGEIV R S+M
Sbjct: 321 WNDNWDTLPLDKQSAIRARQGVAFPQMEDITVMS-DAMEQVAMDGKTQGEIVIRGNSVMK 379
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ + ++ + +F++ D+ V H DG ++I DR+KD+IISGGENISS EVE+ L
Sbjct: 380 GYLKNPDATAKAFK-GGYFHSEDLAVQHPDGSMQIADRAKDIIISGGENISSVEVENALM 438
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + A+VA D WG+ PCAFV LK + + + EA+I F + RL + K ++
Sbjct: 439 GHPDVMLCAVVAMPDDKWGEVPCAFVELK--VGHEASAEALISFTKQRLAGFKCPKRIVF 496
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKT+TGKIQKF LR+
Sbjct: 497 -GELPKTSTGKIQKFELRK 514
>gi|222622057|gb|EEE56189.1| hypothetical protein OsJ_05143 [Oryza sativa Japonica Group]
Length = 556
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 190/461 (41%), Positives = 270/461 (58%), Gaps = 44/461 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-----DDVSAT 59
RLD SVLL HSE+KL+FVD +A A+ + P PVL+ DD S
Sbjct: 99 RLDAAMASVLLRHSEAKLIFVDCALLDVAHDAIRRISQSGATP-PVLVLISELLDDPSDA 157
Query: 60 SSPT----------VGH----PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
P+ VG+ P F P E +P+ALNYTSGTTS PKGV++ HRG ++
Sbjct: 158 KLPSGRVDYEYEHLVGNAGSSPEFAVRWPADENEPIALNYTSGTTSRPKGVIYSHRGAYL 217
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
++++++ + + PV+LWT+PM A+ G P + +
Sbjct: 218 NSLAAVLLNDMASTPVYLWTVPMAAPT-------CASAGSPR--------PPSSTPWRAT 262
Query: 166 GVTHICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
VTH+ GA VL+M+ +++ +P+ R V ++T GA PP VL R E GF+V HSYGL
Sbjct: 263 VVTHMGGAPTVLSMIVNATAEEQRPVARRVTVMTGGAPPPPKVLHRMEEQGFLVIHSYGL 322
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TET G C W+ +W+ L ERAR+K+RQGV GL ++DV P T SV DG++ G
Sbjct: 323 TETYGPATVCTWRPEWDALPAEERARIKSRQGVHHHGL-EVDVKDPATMRSVPRDGKTMG 381
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
E++ R ++M GY KD ++ + WF +GD+ V H DGY+++ DRSKD+IISGGEN
Sbjct: 382 EVMLRGNTVMSGYYKDGAATAEAL-AGGWFRSGDLAVRHEDGYVKVLDRSKDIIISGGEN 440
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK----WELSKKPTEEAIIEFC 399
IS+ EVE+ L+ +PA+ E A+V + D +WG+ PCAFV L+ EE ++ +C
Sbjct: 441 ISTIEVEAALFSHPAVEEAAVVGRPDDYWGETPCAFVKLRPGAAAAAKAGVVEEELMAYC 500
Query: 400 RARLPHYMAHKS-VIIEDELPKTATGKIQKFVLREIVNAVN 439
RARLP YMA ++ V++E+ LPKTATGK+QKF LR A+
Sbjct: 501 RARLPRYMAPRTVVVVEEGLPKTATGKVQKFELRARAKAMG 541
>gi|403718972|ref|ZP_10943571.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
gi|403208205|dbj|GAB98254.1| putative fatty-acid--CoA ligase [Kineosphaera limosa NBRC 100340]
Length = 548
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 177/452 (39%), Positives = 259/452 (57%), Gaps = 24/452 (5%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS 61
V RL + ++ LL HS++K++ VD + A+S + VLI D+ +
Sbjct: 89 VNTRLSAEEIAYLLEHSQAKVVVVDGGLLEVVARAVSTGDRAPSVTDIVLIDDEAAGAVG 148
Query: 62 PT----------VGHPNFKWVQPESEWDP----------MALNYTSGTTSSPKGVVHCHR 101
T + +F+ S +P + LNYTSGTT PKGV++ HR
Sbjct: 149 STADRELAGDRLISLADFRDRADRSAVEPQWGTDDEERHLCLNYTSGTTGRPKGVLYTHR 208
Query: 102 GLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSV 161
G ++ + ++ +LWTLPMFH NGW +W + A+GGT++CLR+V +++ +
Sbjct: 209 GAYLNSFGEIVHSGFTRDTRYLWTLPMFHCNGWCTTWAITAIGGTHVCLREVRGDVVWRL 268
Query: 162 IKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSY 221
+ +TH+ GA VL ++++P L+RPV I T+GA P A +L E LGF + H Y
Sbjct: 269 LHDEQITHLNGAPTVLTTIANAPERTELERPVTITTAGAPPAPATILGMEDLGFRIVHVY 328
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQS 281
GLTE G C + W L ERAR++ARQGV + M VV PE V DG++
Sbjct: 329 GLTEVYGPYSVCEPQDSWADLEPQERARIQARQGVGMVQADRMRVVDPEMN-DVPADGET 387
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GEI R ++M GY +D EG++ WF+TGD+GV+H DGY+E++DR+KDV+ISGG
Sbjct: 388 MGEIAMRGNNLMAGYYRDAEGTAAAF-SGGWFHTGDLGVMHPDGYVELRDRAKDVVISGG 446
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRA 401
E+IS+ EVE L +P + EVA++ D+ WG+RP FV LK + P E +IE ++
Sbjct: 447 ESISTVEVEQALMSHPDVLEVAVIGVPDEKWGERPKGFVKLKEGAAVTPEE--LIEHVKS 504
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
++ Y A K+V ELPKT+TGKIQKF LR+
Sbjct: 505 KIARYKAPKAVDFVVELPKTSTGKIQKFALRD 536
>gi|163847448|ref|YP_001635492.1| acyl-CoA synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222525298|ref|YP_002569769.1| acyl-CoA synthetase [Chloroflexus sp. Y-400-fl]
gi|163668737|gb|ABY35103.1| AMP-dependent synthetase and ligase [Chloroflexus aurantiacus
J-10-fl]
gi|222449177|gb|ACM53443.1| AMP-dependent synthetase and ligase [Chloroflexus sp. Y-400-fl]
Length = 548
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 191/446 (42%), Positives = 263/446 (58%), Gaps = 26/446 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RLD ++ +L H E+K+L D + SP+ AAL N L +I D + P
Sbjct: 101 RLDAATIAFILDHGEAKVLITDREFSPVVKAALE--QCNRTL---TVIDVDDPLYTGPGE 155
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P F + P EW+ + LNYTSGTT++PKGVV+ HRG ++ +S++
Sbjct: 156 RLGSLEYEQFLASGDPEFDLIYPADEWEAITLNYTSGTTANPKGVVYHHRGAYLNALSNI 215
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ W +P+ V+LWTLPMFH NGW + W +AA GTNICLRKVD +I+ I+ + VTH C
Sbjct: 216 VSWGMPHHAVYLWTLPMFHCNGWCFPWTIAANAGTNICLRKVDAGLIWQAIETYRVTHYC 275
Query: 172 GALVVLNMLSSSPSTKPLD----RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
GA +V ++++++ + V L + A PPAAVL +GF ++H YGLTET
Sbjct: 276 GAPIVHSLIANNAPPHWREGRGTHKVSGLIAAAPPPAAVLQAMAEIGFDITHVYGLTETY 335
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G CA + W+TL E+A L RQGV + V+ P T V DGQ+ GE++F
Sbjct: 336 GPAAVCAKQPDWHTLPIAEQAHLNGRQGVTYHAQEAISVLDPATMQPVPWDGQTMGEVMF 395
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R +M GYLK+ + RD WF++GD+ VVH DGY++I DR+KD+IISGGENISS
Sbjct: 396 RGNIVMKGYLKNPAATEAAFRDG-WFHSGDLAVVHPDGYIKITDRAKDIIISGGENISSI 454
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE LY +PA+ A+VA D WG+ P AF+ L+ ++ TEE + + CR L Y
Sbjct: 455 EVEDALYKHPAVMLAAVVAAPDPKWGEVPHAFIELREGVTV--TEEELQQHCRRFLAGYK 512
Query: 408 AHKSVIIEDELPKTATGKIQKFVLRE 433
K LPKT+TGKIQKF+LRE
Sbjct: 513 IPKKFTF-GPLPKTSTGKIQKFILRE 537
>gi|406707193|ref|YP_006757545.1| AMP-binding protein [alpha proteobacterium HIMB59]
gi|406652969|gb|AFS48368.1| AMP-binding enzyme [alpha proteobacterium HIMB59]
Length = 551
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 175/450 (38%), Positives = 269/450 (59%), Gaps = 29/450 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL---PKPVLIHDDVSATSS 61
RLD ++ L H++S++L D + S + L L N +L L D+S ++
Sbjct: 102 RLDPATIAFQLDHADSQILLFDQELSLVIKEVLELCKVNPLLVCYQDKQLDTKDLSKDTN 161
Query: 62 PT------------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
+ VG P+++W+ PE+EWD +++ YTSGTT PKGVV HRG +++
Sbjct: 162 LSSHKIIDYENFIEVGDPDYQWLMPENEWDAISVGYTSGTTGDPKGVVSHHRGAYLLAQG 221
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+ + +P V+LWTLPMFH NGW + W ++A+ GT++CLR+V I+ IK H V+H
Sbjct: 222 NALVASMPKHSVYLWTLPMFHCNGWCFPWTLSAIIGTHVCLRQVRAEPIWKSIKDHKVSH 281
Query: 170 ICGALVVLNMLSSSPSTKPL--DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
+CGA +V++++ S + + + V+ T+ A PP VL + GF+V+H YGLTET
Sbjct: 282 LCGAPIVMSIILSMENQQDYQPEHQVQFFTAAAPPPENVLKQMSEAGFLVTHLYGLTETY 341
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G V W W+ L T +A LKARQGVR + L + V+ P+T V DGQ+ GE++F
Sbjct: 342 GPAVINEWNRDWDDLDMTSQASLKARQGVRYLPLEHLQVLDPDTLKPVPADGQTIGEVMF 401
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
+ +M GYLK++ + WF++GD+ V++ DGYL++KDRSKD+IISGGENISS
Sbjct: 402 QGNIVMKGYLKNKPANDKAFA-GGWFHSGDLAVMYPDGYLQLKDRSKDIIISGGENISSI 460
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK----WELSKKPTEEAIIEFCRARL 403
E+E L N ++ A++A D+ WG+ PCAF+ +K W+ E++ ++C + L
Sbjct: 461 EIEEALLKNEVVSAAAVIAVPDEKWGEVPCAFIEVKDQSQWQ------EDSAKQWCASHL 514
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ K E +P+T+TGKIQK++LRE
Sbjct: 515 ASFKIPKYYFFE-SIPRTSTGKIQKYILRE 543
>gi|389699767|ref|ZP_10185072.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Leptothrix
ochracea L12]
gi|388591339|gb|EIM31593.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Leptothrix
ochracea L12]
Length = 548
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 180/442 (40%), Positives = 259/442 (58%), Gaps = 17/442 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVL-IHDDVSATSSPT 63
RLD ++ L+H E+++L D + +P+ L+L S V+ + D A
Sbjct: 102 RLDAALLAWQLNHCEAQVLITDSEFAPVMDKTLALLKSVHGRDLIVIDVCDSEFAGEHAC 161
Query: 64 VGH-----------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G P + P EWD +A++YTSGTT PKGVV HRG ++ VS+
Sbjct: 162 LGQHEYEELLAEYAPLVRLEGPVDEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVSNAA 221
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P+ PV+LWTLPMFH NGW + W +A +GGT++CLRKVD +I + H V H C
Sbjct: 222 TWTMPHFPVYLWTLPMFHCNGWCFPWTLAMLGGTHVCLRKVDAKLILEAMADHQVDHYCA 281
Query: 173 ALVVLNMLSSSPSTKPLD-RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
A +V ++L ++P+ + V+ L +GA+PPAA++ +GF ++H YGLTE G
Sbjct: 282 APIVHSLLINAPAELRVGLGKVRGLVAGAAPPAAMIEGMARIGFDLTHVYGLTEVYGPAA 341
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
+ W + + +E+ARL RQGVR M V+ PE+ V+ DG GEI+FR
Sbjct: 342 VAVQRPSWASASISEQARLNGRQGVRYALQEGMTVMDPESMAEVRADGAHMGEIMFRGNI 401
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK+ G++ WF+TGD+ V+ D Y++IKDRSKD+IISGGENISS EVE
Sbjct: 402 VMKGYLKNP-GATAASFAGGWFHTGDLAVIEPDRYVKIKDRSKDIIISGGENISSIEVED 460
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
LY +PA+ A+VA+ D WG+ P A+V L L + T + +I C++ L Y +
Sbjct: 461 ALYRHPAVTACAVVAKPDPKWGETPLAYVELA--LGARVTAQELIAHCKSLLAGYKVPRE 518
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
+ E +PKT+TGKIQKF LRE
Sbjct: 519 IRFE-AIPKTSTGKIQKFQLRE 539
>gi|375093193|ref|ZP_09739458.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
gi|374653926|gb|EHR48759.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
Length = 525
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 181/432 (41%), Positives = 258/432 (59%), Gaps = 12/432 (2%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS 61
V RL + V+ +L H +++L D L A ++ + ++ + A +
Sbjct: 88 VNTRLSAREVAYILEHCGARVLVHDPAFDDLVAQARGELAEPPVVIRAGEEYEQLLAGAE 147
Query: 62 PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPV 121
P P E +++NYTSGTT PKGV++ HRG ++ ++ + + V
Sbjct: 148 PMA-------RTPADERALLSINYTSGTTGRPKGVMYHHRGAYLQALAMVAHTGLSPSAV 200
Query: 122 FLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLS 181
LWTLPMFH NGW + W + A T++CL KV+ ++ +++ GVTH+ GA VL+ML+
Sbjct: 201 HLWTLPMFHCNGWCFPWAVTAAAATHVCLPKVEPAEVWRLLRQEGVTHLEGAPTVLSMLA 260
Query: 182 SSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNT 241
+ PL+R V++ T GA P A+L R LGF V+H YGLTET G + C W+ +WN
Sbjct: 261 YAEQAAPLERTVRVATGGAPPTPAILRRMGELGFDVTHLYGLTETFGPAMVCDWRPEWNA 320
Query: 242 LADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQE 301
LA E+ARLKARQGV + + VV + G V DG+S G+I R ++MLGY +D+E
Sbjct: 321 LAAEEQARLKARQGVGNMISCQVRVV-ADDGTDVPADGESVGQIALRGNNVMLGYFRDEE 379
Query: 302 GSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
+ D WF TGD+GV H DGY+E++DRSKDVIISGGENI+S EVE + +PA+ E
Sbjct: 380 ATRQAAPDG-WFRTGDLGVRHPDGYVELRDRSKDVIISGGENIASVEVEQAIAEHPAVFE 438
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKT 421
VA++A D WG+ P A+V++ S +E +I R RL H+ A KSV+ ELPKT
Sbjct: 439 VAVIAVPDDHWGEVPAAYVTVHEGASVSESE--LIAHVRERLAHFKAPKSVVF-GELPKT 495
Query: 422 ATGKIQKFVLRE 433
+TGKIQK+VLRE
Sbjct: 496 STGKIQKYVLRE 507
>gi|359770936|ref|ZP_09274403.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
gi|359311892|dbj|GAB17181.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
Length = 517
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 181/433 (41%), Positives = 256/433 (59%), Gaps = 11/433 (2%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS 61
V RL V+ +L HS + +L V + LALAA + P V++ D +
Sbjct: 94 VNTRLAAAEVAYILDHSGAHVLVVTGEYRELALAATAAKPDIR-----VIVADGPGSEYE 148
Query: 62 PTVGHPNFKWVQP-ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP 120
T+ F + P E++ +A+NYTSGTT PKGV++ HRG ++ ++ +
Sbjct: 149 STLSTTGFTEIGPIEADDALLAINYTSGTTGRPKGVMYNHRGAYLQAIAMAYHAGLTPDS 208
Query: 121 VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML 180
+LWTLPMFH NGW + W + A GGT+ICLR +D I+ + VTH+C A VL M+
Sbjct: 209 GYLWTLPMFHCNGWCFPWAVTASGGTHICLRAIDTTQIWHHLAAGSVTHLCCAPTVLTMV 268
Query: 181 SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWN 240
+ + L PV +LT GA P A+L R + LGF +H YG+TET G +V W+S+W+
Sbjct: 269 AEDDLARILKAPVTVLTGGAPPSPALLRRVDGLGFRTTHLYGMTETYGPIVVNWWQSRWD 328
Query: 241 TLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQ 300
L ER+RL+ARQG+ I V+HP+ G V DG GE+V R ++M GY +D
Sbjct: 329 QLTPDERSRLRARQGIGNIVSEQPRVLHPDGGSEVTPDGTDVGELVVRGNNVMAGYYRDP 388
Query: 301 EGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAIN 360
++ + W TGD+ VVH DGYLE++DR+KD+IISGGENI+S EVE + +P +
Sbjct: 389 AATAAATV-SSWLRTGDLAVVHPDGYLELRDRAKDIIISGGENIASVEVERAIDEHPDVI 447
Query: 361 EVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPK 420
E A+VA+ D+ WG+ P AFV+ + +E IIE CRARL + A K+V ELPK
Sbjct: 448 ESAVVARSDEKWGEVPVAFVTAR---RADLSEREIIEHCRARLARFKAPKAVFFT-ELPK 503
Query: 421 TATGKIQKFVLRE 433
T+TGKI+K +LRE
Sbjct: 504 TSTGKIRKNLLRE 516
>gi|388565593|ref|ZP_10152078.1| putative CoA ligase [Hydrogenophaga sp. PBC]
gi|388267161|gb|EIK92666.1| putative CoA ligase [Hydrogenophaga sp. PBC]
Length = 574
Score = 324 bits (830), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 179/444 (40%), Positives = 254/444 (57%), Gaps = 22/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ ++H ESK+L D + +P+ AL+ + + + D +
Sbjct: 129 RLDAPLLAWQMNHCESKVLITDREFAPVVAKALAAMNRAITV---IDVCDSEYTGPGDRL 185
Query: 65 G-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P + P EWD +A++YTSGTT PKGVV HRG ++ VS+++
Sbjct: 186 GAYEYETLIAAHEPLPRLDGPADEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVSNVVT 245
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P +LWTLPMFH NGW + W +A G ++CLR+V+ I + ++ HGV H C A
Sbjct: 246 WTMPQFPRYLWTLPMFHCNGWCFPWTVALQAGVHVCLRRVEPAAILAAMREHGVDHYCAA 305
Query: 174 LV----VLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+ VL+ +++ P+ K V+ + +GA+PPA+++ LGF ++H YGLTE G
Sbjct: 306 PIVHNGVLSAVAADPALKDGIGAVRGMVAGAAPPASMIEGMARLGFAITHVYGLTEVYGP 365
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
+ W + E+ RL RQGVR M V+ PET V DGQ+ GEI+FR
Sbjct: 366 AAVAVARPNWASAELGEQVRLNGRQGVRYPLQEGMTVMDPETMQEVPADGQTMGEIMFRG 425
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ ++ D WF+TGD+ V+ D Y++IKDRSKD+IISGGENISS EV
Sbjct: 426 NIVMKGYLKNPASTAKAF-DGGWFHTGDLAVLEPDRYVKIKDRSKDIIISGGENISSIEV 484
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA+ A+VA+ D WG+ P AFV L+ + TE +I CR L Y
Sbjct: 485 EDALYRHPAVMACAVVAKPDPKWGESPLAFVELR--PGAQTTEAELIAHCRTLLAGYKVP 542
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K+V E +PKT+TGKIQKF LRE
Sbjct: 543 KAVRFE-AIPKTSTGKIQKFELRE 565
>gi|407799188|ref|ZP_11146082.1| AMP-dependent synthetase and ligase [Oceaniovalibus guishaninsula
JLT2003]
gi|407058830|gb|EKE44772.1| AMP-dependent synthetase and ligase [Oceaniovalibus guishaninsula
JLT2003]
Length = 541
Score = 323 bits (827), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 182/439 (41%), Positives = 253/439 (57%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLF----PSNTILPKPVLIHD----DV 56
RLD V+ +L H ++L+ D PLA AA++ P +P P H +
Sbjct: 103 RLDVDTVAYILDHGGARLILCDTAFVPLAEAAIAAMDGPAPRIVEVPDPGAGHTATGRHI 162
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ G + W P EW+ +ALNYTSGTT PKGVV+ HRG +++T+ + + W++
Sbjct: 163 DWDAFLADGAAHHPWHMPRDEWESIALNYTSGTTGRPKGVVYSHRGAYLMTMGTAVAWQL 222
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P + L +P+FH NGW + W M +GG IC R + I+ I G TH GA +V
Sbjct: 223 PPRARLLTIVPLFHCNGWHHVWTMPMLGGAAICCRDITARAIHDAIADEGATHFGGAPIV 282
Query: 177 LNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
LN+L + +P+D PV + T+GA P AA L E LGF V+H YGLTET G V C
Sbjct: 283 LNLLVNADEADRRPMDHPVHVYTAGAPPAAATLAAMEGLGFRVTHVYGLTETHGHVTECP 342
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W +W+ L ++RA L+ARQGV + ++ V+ + G V DG +QGEI R +M
Sbjct: 343 WSPEWHDLPPSQRAALQARQGVGMPMMEEITVLD-DVGRPVALDGTAQGEIAMRGNCVMK 401
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GY +D + D WF +GD+ V H DG+++I DR+KD+IISGGEN+SS EVE VL
Sbjct: 402 GYYRDDAATRAAF-DGGWFRSGDLAVRHPDGHMQIVDRAKDIIISGGENVSSVEVEGVLM 460
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA++ A+VA+ D WG+ PCAFV LK E A+I F R RL + ++
Sbjct: 461 HHPAVSLCAVVARPDARWGEVPCAFVELK--RGATVDEAALIAFARERLAGFKTPARIVF 518
Query: 415 EDELPKTATGKIQKFVLRE 433
+ ELPKTATGKIQK+ LR
Sbjct: 519 Q-ELPKTATGKIQKYDLRR 536
>gi|84499518|ref|ZP_00997806.1| AMP-binding protein [Oceanicola batsensis HTCC2597]
gi|84392662|gb|EAQ04873.1| AMP-binding protein [Oceanicola batsensis HTCC2597]
Length = 542
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 179/447 (40%), Positives = 252/447 (56%), Gaps = 24/447 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH--DDVSATSSP 62
RLD V+ +L H +K++ D Q + A+ P+P +I DD + S
Sbjct: 103 RLDAGTVAYILDHGGAKVVLCDSQFVSVLAEAMERMEG----PRPRVIECPDDQAGVHSR 158
Query: 63 T----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ G P F W+ PE EW+ +ALNYTSGTT PKGVV+ HRG + ++
Sbjct: 159 SDYMTYEDLLARGDPAFDWIMPEDEWESIALNYTSGTTGRPKGVVYHHRGAHQNAMGQIL 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ P +L +P+FH NGW ++W + +GGT +C R + P +++ GVTH G
Sbjct: 219 SWRMQLYPRYLTIVPLFHCNGWCHTWMIPLLGGTVVCCRDITAPALFAAFADEGVTHFGG 278
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLNML ++P +P ++ V++ T+GA P A L + E +GF V+ YGLTET G
Sbjct: 279 APIVLNMLVNAPEDQRRPFEQTVEVFTAGAPPAPATLAQIEPMGFNVTQVYGLTETYGPA 338
Query: 231 VSCAWKSQ-WNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
W W L RA KARQGV + + + + D ++ GEI+ R
Sbjct: 339 TESTWDDDLWGDLTGDARAAKKARQGVAMPAYEHITAMTSDM-EQIPMDAEATGEIMMRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ E + + +F+TGDI + HSDGYL+I DR+KD+IISGGENISS EV
Sbjct: 398 NGVMKGYLKNPEATKEAFK-GGYFHTGDIALQHSDGYLQIADRAKDIIISGGENISSVEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E VL +P + A+VA+ D+ WG+ PCAFV LK ++ E A+I + R RL +
Sbjct: 457 EGVLMGHPDVLLCAVVAKPDEKWGEVPCAFVELK--DGREGDEAALIAYARERLAGFKTP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVN 436
K V+ ELPKT+TGKIQKF LR V
Sbjct: 515 KKVVFR-ELPKTSTGKIQKFELRRQVR 540
>gi|93005024|ref|YP_579461.1| AMP-dependent synthetase and ligase [Psychrobacter cryohalolentis
K5]
gi|92392702|gb|ABE73977.1| AMP-dependent synthetase and ligase [Psychrobacter cryohalolentis
K5]
Length = 554
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/449 (39%), Positives = 257/449 (57%), Gaps = 27/449 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ L HSE+K+L +D + + A FP+ ++IH +A
Sbjct: 106 RLDINALTFCLQHSEAKVLILDSEFAEHAEMIDETFPN------LIVIHATDAALDIEGF 159
Query: 65 GHPNFK-----------WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G +++ W +P EWD +ALNYTSGTT PKGVV+ HRG + +S+++D
Sbjct: 160 GQMSYEALLASSDSLDNWEKPLDEWDAIALNYTSGTTGKPKGVVYHHRGATLNAISNILD 219
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W +P P++LWTLP+FH NGW + W +A G N+CLR +D +I +I H V+H C A
Sbjct: 220 WDMPKHPMYLWTLPLFHCNGWCFPWTIAERAGVNVCLRNIDADLILQLIAKHQVSHYCSA 279
Query: 174 LVVLNMLSSS-PSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
VV NM++ P K + VK +GA P +L E++GF +SH YGLTE G V
Sbjct: 280 PVVHNMIAGGKPEYKEAITHTVKGWVAGAPPSETMLAAMEAMGFHISHVYGLTEVYGPVT 339
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CA + +W+TL RA+ K+RQGV + + DV T V DG+ GE+ R
Sbjct: 340 VCAEQQEWDTLDVAGRAQKKSRQGVTSHLMTGFDVFKQGTTEPVAADGEEMGELALRGNM 399
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GYLK ++ + + D WF TGD+GV + DGY++I DR KD+IISGGENISS EVE+
Sbjct: 400 VMKGYLKSRKATEEALTDG-WFRTGDLGVKYPDGYIKIMDRLKDIIISGGENISSIEVEN 458
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT--EEAIIEFCRARLPHYMAH 409
VLY I A+VA WG+ P AF+ E+ + T + ++E C+ L +
Sbjct: 459 VLYKMLEIQSCAVVAAPHDKWGEVPVAFI----EIHEGSTLQRDHVMEHCKQHLAGFKVP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNAV 438
K ++ E+PKT+TGK+QKF LR+ ++
Sbjct: 515 KYIVFA-EIPKTSTGKVQKFELRQAAKSL 542
>gi|295699745|ref|YP_003607638.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
gi|295438958|gb|ADG18127.1| AMP-dependent synthetase and ligase [Burkholderia sp. CCGE1002]
Length = 556
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 178/447 (39%), Positives = 262/447 (58%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHD---DVSATSS 61
RL+ + ++ H E+K+L VD + + +A FP I + + D D+ +
Sbjct: 101 RLEAASILYMIEHGEAKVLIVDTEFAAIADRVRERFPEIKI----ICVRDFESDIDHGAM 156
Query: 62 PT---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
P G NF+++ PE EWD +ALNYTSGT +PK VV+ HRG ++ +S+ +
Sbjct: 157 PNDTEYEDFIASGDSNFEYLGPEGEWDAIALNYTSGTKGNPKRVVYHHRGAYLCAISNAL 216
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+W + P +LWTLPMFH GW++ W +AA G N+CLR+VD +I+ +I+ + VTH CG
Sbjct: 217 EWDLEKHPSYLWTLPMFHCYGWTFPWAVAARAGINVCLRRVDAKVIFDLIRRYRVTHYCG 276
Query: 173 ALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V + ++++P ++ VK + +GA+P V+ R +GF + H YGLTE G
Sbjct: 277 APIVHSTIANAPEEWRAGIEHKVKAMVAGAAPGPTVIARMAEIGFDLLHVYGLTEVYGPA 336
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
CA + + + ER L ARQGVR A V P T V DGQ+ GE++FR
Sbjct: 337 AVCAKQQARTHVNNAERVVLNARQGVRYHLQAGTTVRDPHTMEEVPKDGQTIGEVMFRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
M GYLK+++ + + W+ TGD+GV+ DGY++ KDRSKD+IISGGENISS EVE
Sbjct: 397 ITMKGYLKNEKATEEAL-AGGWYRTGDLGVLFPDGYVKPKDRSKDIIISGGENISSIEVE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+Y +PA+ VA+VAQ D WG+ PCAFV + ++ +E II C++ L + K
Sbjct: 456 DAIYSHPAVAVVAVVAQPDAKWGEVPCAFVERR--PGQQASESDIIAHCKSLLAGFKVPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLREIVNA 437
+V ELPKT KIQKF LR+ + +
Sbjct: 514 AVRF-CELPKTFPRKIQKFALRQQIGS 539
>gi|333369965|ref|ZP_08462049.1| acyl-CoA synthetase [Psychrobacter sp. 1501(2011)]
gi|332968807|gb|EGK07855.1| acyl-CoA synthetase [Psychrobacter sp. 1501(2011)]
Length = 560
Score = 320 bits (820), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 175/457 (38%), Positives = 253/457 (55%), Gaps = 34/457 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH--DDVSATSSP 62
RLD ++ L HSE+KLL +D + A + P P +LIH D A + P
Sbjct: 106 RLDIGALTFCLQHSEAKLLIIDSE------FAEHIDPIEETFPHLILIHATDRAFAETKP 159
Query: 63 TVGHPNF-------------------KWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGL 103
G ++ + + P EWD +ALNYTSGTT PKGVV+ HRG
Sbjct: 160 -FGKMSYEELIQFGEFDDEQAAKDFDRTIYPADEWDAIALNYTSGTTGKPKGVVYHHRGA 218
Query: 104 FIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
+ VS+++DW +P +LWTLP+FH NGW + W +A G N+CLR++D +I +I
Sbjct: 219 TLNAVSNILDWDMPKHSTYLWTLPLFHCNGWCFPWTVAERAGINVCLRQIDANLILKLIA 278
Query: 164 HHGVTHICGALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSY 221
+ ++H C A +V NM+S+ + + + V +GA P A+L + E++ F ++H Y
Sbjct: 279 KYNISHYCAAPIVHNMISTGDESLKQAITHTVNGFVAGAPPSEAMLEKMEAMNFQITHVY 338
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQS 281
GLTE G V CA W L+ +ERA K+RQG + + +V+ T V DG+
Sbjct: 339 GLTEVYGPVTICAEHDDWQQLSVSERASKKSRQGTTSHLMTGFEVLKQGTNEPVAADGEE 398
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GE+ R +M GYLK+ + + WF TGD+GV H+DGY++I DR KD+IISGG
Sbjct: 399 MGELALRGNMVMKGYLKNSKATEEAFA-GGWFRTGDLGVKHADGYIKIMDRLKDIIISGG 457
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRA 401
ENISS E+E++LY P ++ +VA + WG+ P AF+ + T E +IE CR
Sbjct: 458 ENISSIEIENILYGLPQVSSCGVVAASNDKWGEVPVAFIEIAE--GATLTREQVIEHCRQ 515
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
L + K VI E+PKT+TGKIQKF LR ++
Sbjct: 516 HLAKFKVPKHVIF-CEIPKTSTGKIQKFELRNAAQSM 551
>gi|295696743|ref|YP_003589981.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
gi|295412345|gb|ADG06837.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
Length = 529
Score = 320 bits (820), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 185/442 (41%), Positives = 262/442 (59%), Gaps = 24/442 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP---------SNTILPKPVLIHDD 55
RL+ + ++ HS+S+++ VD + S P S P + ++
Sbjct: 88 RLNPDELGYVIDHSDSEVVIVDAEWGDRIHDIRSRLPQVRHYIQIDSGLSSPLEAMDYET 147
Query: 56 VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
+ A SSP H E +++NYTSGTTS PKGV+ HRG ++ L+ R
Sbjct: 148 LLAESSPAPIHVEI------DENQMISINYTSGTTSKPKGVIMTHRGNYLNAADFLLHLR 201
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+ + V+L TLPMFH NGW W + AVG T++CLRKVD I ++ + G+T CGA
Sbjct: 202 VSHDDVYLHTLPMFHANGWGGVWAITAVGATHVCLRKVDPEKILNLYEKEGITLACGAPT 261
Query: 176 VLNMLSSSPSTKPL---DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVV 231
VLNML +P+ + + RP ++ T+G+ PPAA++ R + L V H YGLTET+ F+
Sbjct: 262 VLNMLVQAPNLEQVRIATRP-RMGTAGSPPPAAIIDRVQKYLHMEVIHVYGLTETSPFIS 320
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
C W+ +++ L E+A +KARQGV + + VV E G V+ +G+ GEIV R
Sbjct: 321 YCEWRKEFDNLLPEEQAIVKARQGVEMVFSGETKVVR-EDGSDVEWNGREIGEIVARGNV 379
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+M GY K E ++ +RD WF++GD+ VVH +G++EI DR KDVIISGGENISS EVE
Sbjct: 380 VMEGYYKQPEETARAIRDG-WFHSGDLAVVHPNGFIEIVDRLKDVIISGGENISSVEVEG 438
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +PA+ +V +VA+ D+ WG+ P A V +K + T E + EFCRARL H+ K
Sbjct: 439 VLYQHPAVADVGVVARPDERWGEVPVALVVVK--PGHQVTAEELNEFCRARLAHFKCPKD 496
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
DELP+TATGK+QKF LRE
Sbjct: 497 YEFVDELPRTATGKLQKFKLRE 518
>gi|383757452|ref|YP_005436437.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
gi|381378121|dbj|BAL94938.1| AMP-dependent synthetase and ligase [Rubrivivax gelatinosus IL144]
Length = 548
Score = 320 bits (819), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 177/444 (39%), Positives = 256/444 (57%), Gaps = 20/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH--DDVSATSSP 62
RLD ++ ++H E+ +L D + PL AL+ + +PV+I D
Sbjct: 101 RLDAPLLAWQMNHCETAVLITDREFGPLMADALARLKAEHGR-EPVVIDVCDSEYTGRGD 159
Query: 63 TVGHPNFKWVQ-----------PESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
VG ++ + P EWD +A++YTSGTT PKGVV HRG ++ V +
Sbjct: 160 RVGTLEYEALLAAHAPLARLEGPADEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVGNA 219
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
W +P+ P +LWTLPMFH NGW + W +A +GGT++CLR+V+ I ++ HGV H C
Sbjct: 220 ATWTMPHFPKYLWTLPMFHCNGWCFPWTIAMLGGTHVCLRRVEPRAILDAMREHGVDHYC 279
Query: 172 GALVVLNMLSSSPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
A +V ++ ++P+ + + + V+ + +GA+PPAA++ LGF ++H YGLTE G
Sbjct: 280 AAPIVHGLIINAPAEWREGITQQVRGMVAGAAPPAAMIEGMARLGFDITHVYGLTEVYGP 339
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
+ W+ +E+ RL RQGVR M V+ PET V DGQ+ GEI+FR
Sbjct: 340 AAVAVKRPAWSDADLSEQTRLNGRQGVRYALQEGMTVLDPETMAEVPADGQTMGEIMFRG 399
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GYLK+ + WF+TGD+ V+ D Y++I+DRSKD+IISGGENISS EV
Sbjct: 400 NIVMKGYLKNPSATDKAFA-GGWFHTGDLAVIEPDRYVKIRDRSKDIIISGGENISSLEV 458
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA+ A+VA+ D WG+ P A+V LK L T +I C++ L HY
Sbjct: 459 EDALYRHPAVLACAVVARPDPKWGETPVAYVELK--LGVDVTAAELIAHCKSVLAHYKVP 516
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
K + E +PKT+TGKIQKF LR+
Sbjct: 517 KEIRFE-AIPKTSTGKIQKFQLRQ 539
>gi|304394314|ref|ZP_07376237.1| acyl-CoA synthetase [Ahrensia sp. R2A130]
gi|303293754|gb|EFL88131.1| acyl-CoA synthetase [Ahrensia sp. R2A130]
Length = 568
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 262/448 (58%), Gaps = 24/448 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL----------ALAALSLFPSNTILPKPVLIHD 54
RLD ++ +L H E+KLL D + +P AL + + T P+ +
Sbjct: 121 RLDAATIAYILDHGEAKLLVTDTRFAPAVEPALEKLGRALPVIDIVDGETDEPEGKRL-G 179
Query: 55 DVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
++ + +G P + WV P EWD ++LNYTSGTTS PKGVV HRG +I + + W
Sbjct: 180 EMDTEAFIRLGDPAYDWVMPTDEWDAISLNYTSGTTSDPKGVVVHHRGAHLIALGTAASW 239
Query: 115 RIPNQ-------PVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
+ PV ++ +P+FH NGW ++W +AA GG ++ +R V+ +Y+ I H V
Sbjct: 240 PMTGGLEGDATFPVHMYVVPLFHCNGWGHAWALAATGGMSVLIRNVNAKNLYAAIGAHRV 299
Query: 168 THICGALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
TH GA +VL+ML ++ K D P++ T+ A PP AVL + GF ++H YGLTE
Sbjct: 300 THFGGAPIVLSMLINATDEERKDFDWPIRAYTAAAPPPPAVLAAVKKAGFTLTHVYGLTE 359
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
T G V+ CA +++W + E A L +RQGVR L D+ V P+T V DG++ GEI
Sbjct: 360 TYGHVLECAPQAEWLGKPNDELAELNSRQGVRYAVLEDVMVADPDTMEPVPADGETIGEI 419
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
+ R +M GY ++ S WF+TGD+ V+++DGYL+IKDRSKD+IISGGENIS
Sbjct: 420 MVRGNVVMKGYYRNPSASEAAFAGG-WFHTGDLAVMNADGYLKIKDRSKDIIISGGENIS 478
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPH 405
S E+E +L + + A+VA+ D+ WG+ PCAF+ LK K + +CR R+
Sbjct: 479 SVEIEGILAGHEDVMAAAVVAKPDEKWGETPCAFLELK--PGKSGDTATMTAWCRERMAS 536
Query: 406 YMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ K+ I E ELPKT+TGKIQKFVLR+
Sbjct: 537 FKVPKTFIFE-ELPKTSTGKIQKFVLRD 563
>gi|385676053|ref|ZP_10049981.1| o-succinylbenzoate--CoA ligase [Amycolatopsis sp. ATCC 39116]
Length = 517
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 168/360 (46%), Positives = 234/360 (65%), Gaps = 5/360 (1%)
Query: 74 PESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENG 133
P E +++NYTSGTT PKGV++ HRG ++ ++ + + V LWTLPMFH NG
Sbjct: 152 PRDERGLLSINYTSGTTGRPKGVMYHHRGAYLQALAMVGHTGLSPSSVHLWTLPMFHCNG 211
Query: 134 WSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPV 193
W + W + A T++CL KV+ +++ +I+ GVTH+ GA VL+ML+ +P P+ PV
Sbjct: 212 WCFPWAVTAAAATHVCLPKVEPALVWRLIRDEGVTHLNGAPTVLSMLAYAPEAAPVAHPV 271
Query: 194 KILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKAR 253
++ T GA P A+L R LGF V+H YGLTET G ++ C W+ +WNTL +ARLKAR
Sbjct: 272 RVATGGAPPSPAILRRMGELGFDVTHLYGLTETFGPIMICDWRPEWNTLDTAAQARLKAR 331
Query: 254 QGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWF 313
QGV + VV + G V DG + GEI R ++MLGY +D + ++ D WF
Sbjct: 332 QGVGNLVSCRARVVTGD-GSDVPADGVTTGEIAVRGNNVMLGYYRDPDATAQAAPDG-WF 389
Query: 314 YTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWG 373
TGD+GV+H DGY+E++DRSKDVIISGGENI+S EVE V+ +PA+ EVA++A D WG
Sbjct: 390 RTGDLGVMHPDGYVELRDRSKDVIISGGENIASVEVEQVIADHPAVLEVAVIAVPDDHWG 449
Query: 374 KRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ P AFV+L+ S T E I+EF R R+ + A + V+ LPKT+TGKIQK+VLR+
Sbjct: 450 EVPAAFVTLQEGASA--TAEEIVEFVRGRIARFKAPRRVVF-GPLPKTSTGKIQKYVLRD 506
>gi|323488062|ref|ZP_08093314.1| AMP-binding enzyme [Planococcus donghaensis MPA1U2]
gi|323398214|gb|EGA91008.1| AMP-binding enzyme [Planococcus donghaensis MPA1U2]
Length = 537
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 267/442 (60%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS---- 60
RL K ++ +L HS++K+L VD + + P + K +++ D ++
Sbjct: 88 RLSTKDLTYILKHSDAKMLIVDAEFGKMLEDVQDELP----IEKYIIVAVDGFESTINGE 143
Query: 61 --SPTVGHPNFKWVQPESEWDP---MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
+G+ P + D ++LNYTSGTTSSPKGV+ HR ++ + L
Sbjct: 144 DYEAFIGNAAVDAKVPYVDLDENQMLSLNYTSGTTSSPKGVMQTHRTNYLNAANFLHHLE 203
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
I V+L TLPMFH NGW W + A G T++CLRKVD P+I + + HG+T +CGA
Sbjct: 204 IKFDDVYLHTLPMFHTNGWGGVWAITAAGATHVCLRKVDPPLILDLFESHGITSLCGAPT 263
Query: 176 VLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVS 232
V+NML + P K L+ + +++ T+GA P AA++ + +S LG + H YGLTET+ F++
Sbjct: 264 VVNMLVNEPKAKQLELTQTIRMGTAGAPPAAALIAKAQSILGLNMMHVYGLTETSPFILY 323
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C WK+++N L ++A +KARQG+ + VV+ E G V +G+ GEIV R +
Sbjct: 324 CEWKNEFNDLDSDQQASIKARQGIELAFNGETKVVNQEDGKEVAWNGKELGEIVTRGNVV 383
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GY KD E ++ +RD WFYTGD+ V H DG++EI+DR KD+IISGGENISS E+E V
Sbjct: 384 MAGYYKDPEKTAEAIRDG-WFYTGDLAVTHPDGFIEIQDRIKDMIISGGENISSTEIEGV 442
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PAI EVA++A D+ WG+ P A + L + TE+ I+++ R + + KSV
Sbjct: 443 LYKHPAIAEVAVIAVPDEKWGEVPKAIIVLHQ--GAQATEQEILDYTREHMSRFKVPKSV 500
Query: 413 IIEDELPKTATGKIQKFVLREI 434
+ LPKTATGK+QKF LRE+
Sbjct: 501 DFVESLPKTATGKLQKFQLREM 522
>gi|456014270|gb|EMF47885.1| Long-chain-fatty-acid--CoA ligase [Planococcus halocryophilus Or1]
Length = 531
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 266/442 (60%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL K ++ +L HS++K+L VD + + P + K +++ D ++
Sbjct: 88 RLSTKDLTYILKHSDAKMLIVDAEFGKMLEKVQDELP----IEKYIVVAVDGFESTINGE 143
Query: 65 GHPNFKWVQPESEWDP---------MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
+ F P+ P ++LNYTSGTTSSPKGV+ HR ++ + L
Sbjct: 144 DYEAFIGNVPDDAKVPHIDLDENQMLSLNYTSGTTSSPKGVMQTHRTNYLNAANFLHHLE 203
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
I V+L TLPMFH NGW W + A G T++CLRKVD P+I + + HG+T +CGA
Sbjct: 204 IKFDDVYLHTLPMFHTNGWGGVWAITAAGATHVCLRKVDPPLILDLFESHGITSLCGAPT 263
Query: 176 VLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVS 232
V+NML + P K ++ + +++ T+GA P AA++ + +S LG + H YGLTET+ F++
Sbjct: 264 VVNMLVNEPKAKEIELTQTIRMGTAGAPPAAALIAKAQSILGLNMMHVYGLTETSPFILY 323
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C WK+++N L ++A +KARQG+ + VV+ E G V +G+ GEIV R +
Sbjct: 324 CEWKNEFNDLDPEQQASIKARQGIELAFNGETKVVNQENGEEVAWNGKELGEIVTRGNVV 383
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GY KD E ++ +RD WFYTGD+ V H DGY+EI+DR KD+IISGGENISS E+E V
Sbjct: 384 MAGYYKDPEKTAEAIRDG-WFYTGDLAVTHPDGYIEIQDRIKDMIISGGENISSTEIEGV 442
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PAI EVA++A D+ WG+ P A + L + TE+ I+++ R + + KSV
Sbjct: 443 LYKHPAIAEVAVIAVPDEKWGEVPKAIIVLHQ--GAQVTEQEILDYTRENMSRFKVPKSV 500
Query: 413 IIEDELPKTATGKIQKFVLREI 434
+ LPKTATGK+QKF LRE+
Sbjct: 501 DFVEALPKTATGKLQKFQLREM 522
>gi|254463457|ref|ZP_05076873.1| AMP-dependent synthetase and ligase [Rhodobacterales bacterium
HTCC2083]
gi|206680046|gb|EDZ44533.1| AMP-dependent synthetase and ligase [Rhodobacteraceae bacterium
HTCC2083]
Length = 541
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/448 (40%), Positives = 265/448 (59%), Gaps = 24/448 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD ++ + H E+K+ VD Q P AA++ S+ P++I +A P
Sbjct: 103 RLDKGTIAYIFDHGEAKVALVDTQFLPSVEAAIAEMESD----GPLIIEVPDAAADYPAS 158
Query: 65 GH------------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G F+W+ P EW+ +ALNYTSGTT PKGVV+ HRG +++T+ +++
Sbjct: 159 GRYQTYDALLESGDAAFEWIMPADEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVV 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W++ PV+L +P+FH NGW+++W M +GGT +C R V +Y+ I GVTH G
Sbjct: 219 SWQLTLAPVYLTIVPLFHCNGWNHTWMMPMLGGTIVCCRDVTAKAVYNAIADEGVTHFGG 278
Query: 173 ALVVLNML-SSSPSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN L +SSP + D V++ T+GA P A L E++GF ++ YGLTET G V
Sbjct: 279 APIVLNTLVNSSPEERRVFDHTVEVFTAGAPPAPATLAAIETMGFHITQVYGLTETYGHV 338
Query: 231 VSCAWKSQ-WNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C W + W+ L + R+ +KARQGV + D+ V+ P+ V DG QGEI+ R
Sbjct: 339 TECLWDGETWDALDQSSRSAIKARQGVAMPMMDDITVLDPDMN-QVAMDGAHQGEIMIRG 397
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
S+M GYLK+ + +F++GD+ V H D +++I DR+KD+IISGGENISS EV
Sbjct: 398 NSVMKGYLKNPSATDEAFA-GGYFHSGDLAVQHPDTHIQIADRAKDIIISGGENISSVEV 456
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L + A++ A+VA+ D WG+ PCAFV L + +E +I + R L + A
Sbjct: 457 EGTLMAHSAVSLCAVVAKPDDKWGEVPCAFVELL--PGAEVSEAELIAYARETLAGFKAP 514
Query: 410 KSVIIEDELPKTATGKIQKFVLREIVNA 437
K+VI + ELPKT+TGKIQKF LR +++
Sbjct: 515 KAVIFQ-ELPKTSTGKIQKFELRNALSS 541
>gi|146276338|ref|YP_001166497.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17025]
gi|145554579|gb|ABP69192.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17025]
Length = 548
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/446 (42%), Positives = 257/446 (57%), Gaps = 23/446 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD VS +L H +KL+ D LA A + + PV++ D + +P+
Sbjct: 103 RLDLDTVSYILEHGGAKLVLCDTAFLKLASEAAARLGARA----PVIVEVCDRESGFTPS 158
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G+P +WV PE EW+ +ALNYTSGTT PKGVV+ HRG ++ T + I
Sbjct: 159 GDFLEYEELMARGNPWAEWVMPEDEWESLALNYTSGTTGRPKGVVYHHRGAYLATCGNAI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ PV+L +P+FH NGW ++W + +GGT +C R + IY+ I VTH G
Sbjct: 219 AWRMQLFPVYLTIVPLFHCNGWCHTWMVPMLGGTVVCCRDITAKAIYAAIADERVTHFGG 278
Query: 173 ALVVLN-MLSSSPSTKP-LDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN +++++P + D V++ T+GA PPAA L E LGF V+ YGLTE G
Sbjct: 279 APIVLNTLINAAPEDRRHFDHVVEVFTAGAPPPAATLAAIEPLGFNVTQVYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C WK +W ERA LKAR GV L + VH G + D GEI R
Sbjct: 339 TECIWKPEWEGTTGDERAALKARTGVAMATLEGAE-VHDTHGQPIPRDTVHLGEIAMRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GY K+ E ++ RD WF +GDI H DGY++I DR+KD+IISGGEN+SS EVE
Sbjct: 398 MVMKGYYKNPEATAEAFRDG-WFRSGDIAFQHEDGYIKITDRAKDIIISGGENVSSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
V+ +PA++ A+VA+ D+ WG+ PCAFV LK ++ TE+ II F R RL + K
Sbjct: 457 GVIAHHPAVSLCAVVAKPDERWGEVPCAFVELK--RGREATEDEIIAFARERLAGFKTPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLREIVN 436
VI ELPKT+TGKIQKF LR +
Sbjct: 515 QVIF-CELPKTSTGKIQKFELRAVAK 539
>gi|332526793|ref|ZP_08402895.1| putative CoA ligase [Rubrivivax benzoatilyticus JA2]
gi|332111196|gb|EGJ11228.1| putative CoA ligase [Rubrivivax benzoatilyticus JA2]
Length = 548
Score = 318 bits (815), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 175/443 (39%), Positives = 254/443 (57%), Gaps = 18/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALS-LFPSNTILPKPVLIHDDVSATSSPT 63
RLD ++ ++H E+ +L D + PL AL+ L + P + + D
Sbjct: 101 RLDAPLLAWQMNHCETAVLITDREFGPLMADALARLKAEHGREPVVIDVCDSEYTGRGDR 160
Query: 64 VG-----------HPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
VG P + P EWD +A++YTSGTT PKGVV HRG ++ V +
Sbjct: 161 VGTLEYEELLAAHAPLARLEGPADEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVGNAA 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P+ P +LWTLPMFH NGW + W +A +GGT++CLR+V+ I ++ HGV H C
Sbjct: 221 TWTMPHFPTYLWTLPMFHCNGWCFPWTVAMLGGTHVCLRRVEPKAILDAMREHGVDHYCA 280
Query: 173 ALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +V ++ ++P+ + + + V+ + +GA+PPAA++ +GF ++H YGLTE G
Sbjct: 281 APIVHGLIINAPADWREGITQQVRGMVAGAAPPAAMIEGMAKIGFDITHVYGLTEVYGPA 340
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
++ W+ +E+ RL RQGVR M V+ PET V DGQ+ GEI+FR
Sbjct: 341 AVAVKRAAWSEADLSEQTRLNGRQGVRYALQEGMTVLDPETMAEVPADGQTMGEIMFRGN 400
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYLK+ + WF+TGD+ V+ D Y++I+DRSKD+IISGGENISS EVE
Sbjct: 401 IVMKGYLKNPSATDKAFA-GGWFHTGDLAVIEPDRYVKIRDRSKDIIISGGENISSLEVE 459
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
LY +PA+ A+VA+ D WG+ P A+V LK L T + +I C+ L Y K
Sbjct: 460 DALYRHPAVLACAVVAKPDPKWGETPVAYVELK--LGVDVTADELIAHCKRVLAGYKVPK 517
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+ E +PKT+TGKIQKF LR+
Sbjct: 518 EIRFET-IPKTSTGKIQKFQLRQ 539
>gi|77462142|ref|YP_351646.1| AMP-binding protein [Rhodobacter sphaeroides 2.4.1]
gi|77386560|gb|ABA77745.1| AMP-binding protein [Rhodobacter sphaeroides 2.4.1]
Length = 549
Score = 317 bits (812), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 195/446 (43%), Positives = 256/446 (57%), Gaps = 23/446 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD VS +L H +KLL D LA A + P+L+ D A SP+
Sbjct: 103 RLDLDTVSYILEHGGAKLLLCDTAFLKLAKDACARLEGKA----PILVEVCDREAGFSPS 158
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G+P WV PE EW+ +ALNYTSGTT PKGVV+ HRG ++ T + I
Sbjct: 159 GEVLEYEDLMDRGNPWAPWVMPEDEWESIALNYTSGTTGRPKGVVYHHRGAYLSTYGNAI 218
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
WR+ PV+L +P+FH NGW ++W + +GGT +C R + IY+ I GVTH G
Sbjct: 219 AWRMQLYPVYLTIVPLFHCNGWCHTWMVPMLGGTVVCCRDITATAIYAAIADEGVTHFGG 278
Query: 173 ALVVLNML--SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A +VLN L ++ + D+ V++ T+GA PPAA L E LGF V+ YGLTE G
Sbjct: 279 APIVLNTLINAAPEDRRSFDQVVEVFTAGAPPPAATLAAIEPLGFNVTQVYGLTEVYGPA 338
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C WK +W+ A ER+ LKAR GV L + VH G + D GEI R
Sbjct: 339 TECIWKPEWDETAGEERSALKARTGVAMATLEGAE-VHDTHGQPIPRDTVHLGEIAMRGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GY K+ E ++ RD WF +GDI H DGY++I DR+KD+IISGGEN+SS EVE
Sbjct: 398 MVMKGYYKNPEATAEAFRDG-WFRSGDIAFQHPDGYIKITDRAKDIIISGGENVSSVEVE 456
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
V+ +PA++ A+VA+ D+ WG+ PCAFV LK ++ TEE II F R RL + K
Sbjct: 457 GVIAHHPAVSLCAVVAKPDERWGEVPCAFVELK--RGRQATEEEIIAFARERLAGFKTPK 514
Query: 411 SVIIEDELPKTATGKIQKFVLREIVN 436
VI ELPKT+TGKIQKF LR +
Sbjct: 515 QVIF-CELPKTSTGKIQKFELRAVAK 539
>gi|384136516|ref|YP_005519230.1| AMP-dependent synthetase and ligase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339290601|gb|AEJ44711.1| AMP-dependent synthetase and ligase [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
Length = 504
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 187/442 (42%), Positives = 255/442 (57%), Gaps = 21/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI--HD------DV 56
RL + ++ +L HSES++L VD S + + L + I HD D
Sbjct: 64 RLQPEEIAYILDHSESEVLIVD---SEWGHVVEPILRGRSGLRHVIQIASHDSPLDACDY 120
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
A P + E P+++NYTSGTTS PKGVV HR ++ L R+
Sbjct: 121 EALLERASDDPIETHI---DEDQPISINYTSGTTSRPKGVVLTHRNSYLNAADFLFHLRV 177
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+ V+L TLP+FH NGW W + AVGGT+ICLRKVD +I + + GVT C A V
Sbjct: 178 AHDDVYLHTLPLFHVNGWGGVWAITAVGGTHICLRKVDPAVILRLYVNEGVTLACAAPTV 237
Query: 177 LNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSC 233
LNM+ P + L+R ++ T+G+ PPAAV+ + E L + H YGLTET+ F+ C
Sbjct: 238 LNMILQHPDVEHVRLNRRTRMATAGSPPPAAVIEKAEKFLQMEILHVYGLTETSPFITYC 297
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
W L RAR KAR+GV + ++ VV E G V +GQ GEIV R +M
Sbjct: 298 EWTQAHERLQGDARARAKARKGVEMVFAGEVKVVR-EDGQEVAWNGQEVGEIVARGNVVM 356
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY K+ + ++ +RD WF+TGD+ VVH DG++EI DR KD+IISGGEN+SS EVE VL
Sbjct: 357 DGYYKNPDETAKVIRDG-WFHTGDLAVVHPDGHIEIVDRLKDIIISGGENVSSVEVEGVL 415
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +P + E +V++ D WG+ P AFV K L + TEE + FCRARL H+ K+
Sbjct: 416 YEHPDVIEAGVVSRPDDQWGEVPVAFVVKK--LGEVLTEEELRAFCRARLAHFKVPKAFY 473
Query: 414 IEDELPKTATGKIQKFVLREIV 435
D+LP+TATGK+QKF LRE++
Sbjct: 474 FVDQLPRTATGKLQKFKLREML 495
>gi|254240648|ref|ZP_04933970.1| AMP-binding protein domain [Pseudomonas aeruginosa 2192]
gi|126194026|gb|EAZ58089.1| AMP-binding protein domain [Pseudomonas aeruginosa 2192]
Length = 549
Score = 317 bits (812), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 171/439 (38%), Positives = 260/439 (59%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL+ + ++ +L H +++L D + +A AL++ + +L V I DD + +
Sbjct: 103 RLEARSIAFILRHCAARVLICDREFGAVAQQALAMLDAPPLL---VGIDDDQAERADLAH 159
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G P P++EW +A+NYTSGTT PKGVV HRG ++ + + +
Sbjct: 160 DLDYEAFLAQGDPGRPLGAPQNEWQSIAINYTSGTTGDPKGVVLHHRGAYLNACAGALIF 219
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + ++LWTLPMFH NGWS++W + GGT++CLRKV I++ I H VTH+ A
Sbjct: 220 QLGPRSIYLWTLPMFHCNGWSHTWAVTLSGGTHVCLRKVQPDAIHAAIAEHAVTHLSAAP 279
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
VV++ML + PV ++T GA+PP+AV+ E+ GF ++H+YG+TE+ G C
Sbjct: 280 VVMSMLIHAEHASVPAVPVSVITGGAAPPSAVIAAMEARGFSITHAYGMTESYGPSTLCL 339
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W+ + L RA+ +RQGV L + V+ +TG V DG++ GE+V R ++M
Sbjct: 340 WQPGVDELPLEARAQFMSRQGVAHPMLEEATVLDTDTGRPVPADGRTLGELVVRGNTVMK 399
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYL + E + + D W +TGD+ V+H DGY+EIKDR+KD+II + E VLY
Sbjct: 400 GYLHNPEATRAALADG-WLHTGDLAVLHPDGYVEIKDRAKDIIIPAARTSARWRSEEVLY 458
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + E A+V RD WG+ P AFV+L+ + + T + ++ +CR RL H+ A + V +
Sbjct: 459 QHPEVVEAAVVRARDSRWGETPHAFVALRADALPRTTGDDLVRWCRERLAHFKAPRHVTL 518
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKTATGKIQKFVLRE
Sbjct: 519 -TELPKTATGKIQKFVLRE 536
>gi|389817162|ref|ZP_10207944.1| AMP-binding protein [Planococcus antarcticus DSM 14505]
gi|388464738|gb|EIM07066.1| AMP-binding protein [Planococcus antarcticus DSM 14505]
Length = 531
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 182/442 (41%), Positives = 267/442 (60%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL K ++ +L HS++K+L VD + L + P + K +++ + ++ V
Sbjct: 88 RLSTKDLAYILKHSDAKMLIVDAEFGKLIEEIQNELP----IEKYIIVAVEGCESAIKGV 143
Query: 65 GHPNFKWVQPESEWDPMA---------LNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
+ +F PE+ P A LNYTSGTTS+PKGV+ HR ++ + L
Sbjct: 144 DYEHFINDVPENAKIPTAELDENQMLSLNYTSGTTSNPKGVMQTHRTNYMNAANFLHHLE 203
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
I V+L TLPMFH NGW W + A G T++CLRKVD +I + + HG+T +CGA
Sbjct: 204 IKYDDVYLHTLPMFHTNGWGGVWAITAAGATHVCLRKVDPSLILDLFESHGITALCGAPT 263
Query: 176 VLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVS 232
V+NML + P K ++ + +++ T+GA P AA++ + +S LG + H YGLTET+ F++
Sbjct: 264 VVNMLVNEPKAKEIELTQKIRMGTAGAPPAAALIAKAQSILGLNMMHVYGLTETSPFILY 323
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C WK+++N L ++A +KARQG+ + VV+ E G V +G+ GEIV R +
Sbjct: 324 CEWKNEFNELDPDQQASIKARQGIELAFNGETKVVNQEDGEEVAWNGKELGEIVTRGNVV 383
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GY KD E ++ +RD WFYTGD+ V H DG++EI+DR KD+IISGGENISS E+E V
Sbjct: 384 MAGYYKDPEKTAEAIRDG-WFYTGDLAVTHPDGFIEIQDRIKDMIISGGENISSTEIEGV 442
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +PAI EVA++A D+ WG+ P A + L TE+ I+++ R + + KSV
Sbjct: 443 LYKHPAIAEVAVIAVPDEKWGEVPKAIIVL--HKGANVTEQEILDYTRENMSRFKVPKSV 500
Query: 413 IIEDELPKTATGKIQKFVLREI 434
+ LPKTATGK+QKF LRE+
Sbjct: 501 DFVETLPKTATGKLQKFQLREM 522
>gi|148654773|ref|YP_001274978.1| AMP-dependent synthetase and ligase [Roseiflexus sp. RS-1]
gi|148566883|gb|ABQ89028.1| AMP-dependent synthetase and ligase [Roseiflexus sp. RS-1]
Length = 560
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 183/449 (40%), Positives = 263/449 (58%), Gaps = 30/449 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL------ALAALSLF------------PSN-TI 45
RL ++ +L HS ++ L VD + +PL L AL + P++ +
Sbjct: 111 RLTSDEIAYILDHSGARALIVDAELTPLIAPIRTQLNALEVIVVADVSRRHAGSPTDAST 170
Query: 46 LPKPVLIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
LP V +++ + SSP P+ V E P+++NYTSGTT PKGV++ HRG ++
Sbjct: 171 LPGSV-DYEEFLSDSSP---EPSVYPVDDEDH--PISINYTSGTTGRPKGVIYTHRGAYL 224
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ +I+ + +LWTLPMFH NGW + W + +G T++CL KV+ + S+I+
Sbjct: 225 NALGEIIEVGLRPDSTYLWTLPMFHCNGWCFPWAVTGIGATHVCLPKVEAARVLSLIEAE 284
Query: 166 GVTHICGALVVLNMLS-SSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
V+H CGA VL L+ P R + ++T+ A PP A++ R E LG + H YGLT
Sbjct: 285 QVSHFCGAPTVLITLAMECPPGFRFARRLTVVTAAAPPPPAIIQRMEELGATIIHVYGLT 344
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G C WK +W+ L+ ERARLKARQGV + ++ VV E V DG + GE
Sbjct: 345 ETYGPHTVCEWKREWDGLSLEERARLKARQGVGYLHAPELRVVDEEM-RDVPADGATLGE 403
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
+V R ++M GY +D+E + R WF++GD+GV+H DGY+E++DR KD+IISGGENI
Sbjct: 404 VVMRGNNVMKGYYRDEEATRQAFR-GGWFHSGDLGVMHPDGYIELRDRKKDIIISGGENI 462
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
S+ E+E VLY +P + E ++ D WG+ P AF+ LK + T + II FCR RL
Sbjct: 463 STIEIERVLYQHPLVLEATVIGVPDIRWGETPKAFIILK--PGAQMTADEIIAFCRERLA 520
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
H+ K V + LPKT+TGKIQKFVLRE
Sbjct: 521 HFKCPKFVEFVESLPKTSTGKIQKFVLRE 549
>gi|440704425|ref|ZP_20885276.1| AMP-binding enzyme [Streptomyces turgidiscabies Car8]
gi|440273935|gb|ELP62605.1| AMP-binding enzyme [Streptomyces turgidiscabies Car8]
Length = 527
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 179/434 (41%), Positives = 258/434 (59%), Gaps = 18/434 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL----PKPVLIHDDVSATS 60
RL V +L HSES +L D Q L A++ + ++ P ++ + A +
Sbjct: 96 RLSATEVRYILEHSESAVLLQDPQFDDLVGTAIAGMHNPPVVVRAGPGDDGAYERLLAAA 155
Query: 61 SPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP 120
PT V E ++LNYTSGTT PKGV++ HRG ++ ++ + ++
Sbjct: 156 VPTA-------VLLSDEQALLSLNYTSGTTGRPKGVMYHHRGAYLQALAMVTHTQLSASS 208
Query: 121 VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML 180
+LWTLPMFH NGWS+ W + AVGGT++CL KV+ I+ I+ +TH+CGA VL+M+
Sbjct: 209 AYLWTLPMFHCNGWSFPWAVTAVGGTHVCLPKVEASEIWRHIQGEHITHLCGAPAVLSMV 268
Query: 181 SSSP-STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQW 239
++P + + D ++ LT GA P +L E+L V+H YGLTET G V C W +W
Sbjct: 269 VNAPEAGRASDGVIRFLTGGAPPSPTLLAAAEALRIDVTHLYGLTETFGPAVLCDWHPEW 328
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKD 299
N L E++RL+ARQGV + VV E V DG + GEI R ++MLGY KD
Sbjct: 329 NGLDAAEQSRLRARQGVANVIGLTARVVDGEK--DVPADGTTIGEIRLRGNNLMLGYFKD 386
Query: 300 QEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAI 359
G++ D WF TGD+GV H DGY+E++DRSKDVIISGGENI+S EVE + +PA+
Sbjct: 387 DAGTAAAAPDG-WFRTGDLGVRHPDGYIELRDRSKDVIISGGENITSIEVEQAIASHPAV 445
Query: 360 NEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELP 419
E A+V D+ WG+ P A+V L+ + TE+ I++ ++R+ + A K V+ ELP
Sbjct: 446 LEAAVVGAPDERWGEVPVAYVVLRPDAFA--TEQDIVDHVKSRIARFKAPKRVVF-GELP 502
Query: 420 KTATGKIQKFVLRE 433
+T+TGKIQK++LRE
Sbjct: 503 RTSTGKIQKYLLRE 516
>gi|221636234|ref|YP_002524110.1| AMP-dependent synthetase and ligase [Thermomicrobium roseum DSM
5159]
gi|221157753|gb|ACM06871.1| AMP-dependent synthetase and ligase [Thermomicrobium roseum DSM
5159]
Length = 560
Score = 315 bits (806), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 186/450 (41%), Positives = 259/450 (57%), Gaps = 32/450 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI------------ 52
RL + V +L HS ++ L +D ALA+L + P LP+ L+
Sbjct: 111 RLSSEEVRYILEHSGARALILDG-----ALASL-VEPIRGALPELRLVVWADIDSRHGDA 164
Query: 53 ------HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
DV + G P+ E + +++NYTSGTT PKGV+ HRG ++
Sbjct: 165 PPARASFADVEYEALLAEGSPDPSVYPLRDEEEVLSINYTSGTTGRPKGVMVTHRGAYLN 224
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+ +I+ R+ + +LWTLPMFH NGW + + + +G T++ L KVD I+ +I+ G
Sbjct: 225 ALGEIIEARLVPESAYLWTLPMFHCNGWYFPYAVTGIGATHVVLPKVDPSRIFQLIEQEG 284
Query: 167 VTHICGALVVLNML---SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
VTH CGA VL ML SP + RP+ +LT+ A P A + E++G + H YGL
Sbjct: 285 VTHFCGAPTVLIMLLQGRPSPDYR-FPRPLTVLTAAAPPAPATIAAMEAMGARIVHVYGL 343
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TET G C W +W+ L ERARLKARQGV I ++ VV E V DG++ G
Sbjct: 344 TETYGPHTVCEWHEEWDALPLEERARLKARQGVGYIHAPELRVVD-EAMRDVPADGETLG 402
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
E+V R ++M GY +D+E ++ WF++GD+ VVH DGY+E++DR KD+IISGGEN
Sbjct: 403 EVVMRGNNVMKGYYRDEEATARAF-AGGWFHSGDLAVVHPDGYIELRDRKKDIIISGGEN 461
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL 403
IS+ EVE LY +PA+ E A++ D+ WG+ P AFV LK + P E +I FCR RL
Sbjct: 462 ISTIEVERALYQHPAVLECAVIGIPDEKWGEVPKAFVVLKPGMHATPEE--LIAFCRDRL 519
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
HY K V + + LPKT+TGKIQKFVLRE
Sbjct: 520 AHYKCPKQVELVESLPKTSTGKIQKFVLRE 549
>gi|363422715|ref|ZP_09310789.1| acyl-CoA ligase/synthetase [Rhodococcus pyridinivorans AK37]
gi|359732824|gb|EHK81833.1| acyl-CoA ligase/synthetase [Rhodococcus pyridinivorans AK37]
Length = 544
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 250/442 (56%), Gaps = 19/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ---------SSPLALAALSLFPSNTILPKPVLIHDD 55
RL + +L HSE+KLLFVD + + +A + P +T+ P P +
Sbjct: 101 RLAGPELEYILDHSETKLLFVDSELLGSVAKVRDNVPGVAEIIEVPDSTV-PAPEVPAGV 159
Query: 56 VSATSSPTVGHPNFKWVQP-----ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+A + + P + E + LNYTSGTT PKGV++ HRG ++ ++
Sbjct: 160 ATARYDEFLAQADSLDATPLPWSVDDELGVITLNYTSGTTGKPKGVMYTHRGAYLNSLGE 219
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
Q +LWTLPMFH NGW W + A GT+ICLR V I+ I + GVT++
Sbjct: 220 TFHNSFDGQSKYLWTLPMFHCNGWCTPWAVTAAAGTHICLRAVRADAIWDAIDNLGVTNL 279
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA V + ++++ PLDRP++I T+GA P V+ + E +G V H YGLTE G
Sbjct: 280 CGAPAVCSTIANAEQAHPLDRPLRITTAGAPPSPTVIAQLEQIGITVVHVYGLTEVYGPY 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C ++ W+ ERA L +RQGV + VV E V DG++ GEIV R
Sbjct: 340 TICEYQDSWDDKPADERAALLSRQGVGMLQAETARVVD-EDMNDVPADGETMGEIVLRGN 398
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++MLGY KD + + R WF+TGD+GV++ DGY+++KDR+KD+IISGGENIS+ EVE
Sbjct: 399 NVMLGYYKDPDATEEAFR-GGWFHTGDLGVMYPDGYIQLKDRAKDIIISGGENISTVEVE 457
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+ +PA+ +VA+V D+ WG+RP AFV LK + T E II++ R L Y +
Sbjct: 458 QAIVSHPAVLDVAVVGVPDEKWGERPKAFVILK--KGESVTAEEIIDYTRTLLAGYKVPR 515
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
++ ELP+T+TGKI KF LR
Sbjct: 516 DIVFPLELPRTSTGKILKFELR 537
>gi|325000683|ref|ZP_08121795.1| AMP-dependent synthetase and ligase [Pseudonocardia sp. P1]
Length = 532
Score = 314 bits (805), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 179/432 (41%), Positives = 254/432 (58%), Gaps = 12/432 (2%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS 61
V RL V+ +L H + +L D L L P+ V + DD
Sbjct: 102 VNTRLSAGEVAYILEHCRASVLVHDPVFDELVADVLGRLDDP---PRAVRVGDDYERLI- 157
Query: 62 PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPV 121
T G P V P+ E +++NYTSGTT PKGV++ HRG ++ ++ + + V
Sbjct: 158 -TWGEPTA--VTPDDERALLSINYTSGTTGRPKGVMYHHRGAYLQALAMVGHTGLTPSSV 214
Query: 122 FLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLS 181
LWTLPMFH NGW + W + A T++CL +V+ I+ +++ GVTH+ GA VL+M++
Sbjct: 215 HLWTLPMFHCNGWCFPWAVTAAAATHVCLPRVEPARIWELVRDQGVTHLNGAPTVLSMIA 274
Query: 182 SSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNT 241
+P P+ V++ T GA P A+L R LGF V+H YGLTET G + C W+ +WN
Sbjct: 275 HAPEAGPVATTVRVATGGAPPSPAILRRMAELGFEVTHLYGLTETFGPAMICDWRPEWNA 334
Query: 242 LADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQE 301
L +AR+KARQGV + + V+ + G DG + G+I R ++MLGYL D++
Sbjct: 335 LDGEAQARMKARQGVGNMIACAVRVI-TDDGGDAPADGTTTGQIALRGNNVMLGYLDDEQ 393
Query: 302 GSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
+ D WF TGDIGV+H DGY+E++DRSKDVI+SGGENI+S EVE + +P + E
Sbjct: 394 ATREAAPDG-WFRTGDIGVMHPDGYVELRDRSKDVIVSGGENIASVEVEQAIADHPDVLE 452
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKT 421
VA++A D+ WG+ P A+V+L+ TEE I+E R RL + A K V+ ELPKT
Sbjct: 453 VAVIAVPDERWGEVPAAYVTLR--DGATVTEEEIVEHVRTRLARFKAPKRVVFT-ELPKT 509
Query: 422 ATGKIQKFVLRE 433
+TGKIQKFVLR+
Sbjct: 510 STGKIQKFVLRD 521
>gi|254438630|ref|ZP_05052124.1| AMP-binding enzyme, putative [Octadecabacter antarcticus 307]
gi|198254076|gb|EDY78390.1| AMP-binding enzyme, putative [Octadecabacter antarcticus 307]
Length = 541
Score = 314 bits (804), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 180/439 (41%), Positives = 261/439 (59%), Gaps = 15/439 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL----PKPVL----IHDDV 56
RLD ++ + H E+K++ VD Q P+ + A+ L P + I + +
Sbjct: 105 RLDVDTIAYIFDHGEAKVVLVDSQFLPVCMKAVEAMEGEAPLVVEVPDAIAGVPEIGEQI 164
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ G PNF W+ P+ EW+ +ALNYTSGTT PKGVV HRG +++T+ + + WR+
Sbjct: 165 DYETFLAAGDPNFAWIMPDDEWESLALNYTSGTTGRPKGVVCHHRGAYLMTMGTPVTWRM 224
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P+FL +P+FH NGW+++W + +GGT +C R + IY+ I GVTH GA +V
Sbjct: 225 TLHPIFLTIVPLFHCNGWNHTWMIPMLGGTVVCCRDISAAAIYAAIADEGVTHFGGAPIV 284
Query: 177 LNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
LN+L ++ + D V++ T+GA P A L LGF V YGLTET G V C
Sbjct: 285 LNLLVNAKPEDRRDFDHTVEVFTAGAPPAPATLAAIGDLGFNVQQVYGLTETYGHVTECL 344
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
W + W++L +++ +KARQGV + D+ V+ +T V DG+SQGEIV R S+M
Sbjct: 345 WNNDWDSLPQDKQSAIKARQGVAFPQMEDITVMS-DTMEQVTMDGKSQGEIVIRGNSVMK 403
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GYLK+ ++ + +F++ D+ V + DG ++I DR+KD+IISGGENISS EVESVL
Sbjct: 404 GYLKNPGATAKAFK-GGYFHSEDLAVQYPDGSMQIADRAKDIIISGGENISSVEVESVLM 462
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + A+VA D WG+ PCAFV LK + +A+I F + RL + K V+
Sbjct: 463 GHPDVMLCAVVAMPDDKWGEVPCAFVELK--VGHVGDADALIAFTKQRLAGFKCPKKVVF 520
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKT+TGKIQKF LR+
Sbjct: 521 -GELPKTSTGKIQKFELRK 538
>gi|298245485|ref|ZP_06969291.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
gi|297552966|gb|EFH86831.1| AMP-dependent synthetase and ligase [Ktedonobacter racemifer DSM
44963]
Length = 525
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/433 (39%), Positives = 256/433 (59%), Gaps = 15/433 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD----VSATS 60
RL ++ +L HS + LFVD + L + L+L I DD A
Sbjct: 93 RLSSNEINFILQHSGASFLFVDNELYHL-VEQLNLDALQVIRIADDGTDDDPYEQFLAQG 151
Query: 61 SPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP 120
+P HP W+ E E +++NYTSGTT +PKGV++ +RG ++ + +I+ + ++
Sbjct: 152 NP---HPLHSWLVDEEE--TISINYTSGTTGNPKGVMYTYRGAYLNALGEVIETGLNSES 206
Query: 121 VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML 180
++LWTLPMFH NGW ++W + AVG T++CLRKV+ ++ ++++ +TH GA V L
Sbjct: 207 IYLWTLPMFHCNGWCFTWAVTAVGATHVCLRKVEPEQVWELLENQSITHYNGAPTVQIFL 266
Query: 181 SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWN 240
++ P PL RPV +GA P +L + +SL H YGLTET G C W +WN
Sbjct: 267 ANHPKAHPLSRPVTATIAGAPPSPTLLGQLKSLNIRPLHVYGLTETYGPYTVCEWHEEWN 326
Query: 241 TLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQ 300
++ E+A L ARQG + +V+P+ G + DG + GE+V R ++ GY ++
Sbjct: 327 MRSEEEQAALLARQGQGYVTAEQARIVNPDLG-DLPKDGSTMGEVVMRGNNVAKGYYGNE 385
Query: 301 EGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAIN 360
+ WF++GDIGV H D Y+E++DR+KDVIISGGENIS+ EVE ++ +PA+
Sbjct: 386 LATEKAFA-GGWFHSGDIGVWHEDNYIELRDRAKDVIISGGENISTIEVEQLIARHPAVL 444
Query: 361 EVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPK 420
E A+VA D WG+RP AF++LK E ++ TEE II FC RL H+ +V LPK
Sbjct: 445 ECAVVAIPDATWGERPKAFITLKPE--REATEEEIIAFCWERLAHFKCPTAVEF-GLLPK 501
Query: 421 TATGKIQKFVLRE 433
T+TGK+QK+VLRE
Sbjct: 502 TSTGKVQKYVLRE 514
>gi|331694437|ref|YP_004330676.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
gi|326949126|gb|AEA22823.1| o-succinylbenzoate--CoA ligase [Pseudonocardia dioxanivorans
CB1190]
Length = 534
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 177/438 (40%), Positives = 249/438 (56%), Gaps = 15/438 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLA---LAALSLFPSNTILPKPVLIHDDVSATSS 61
RL + V +L HS SK+L VD P+ + L+ + P D + S
Sbjct: 91 RLSTEEVRYILDHSGSKVLVVDAALYPVVAPLVGELATVEEIITVVDPASPGDGIG--SG 148
Query: 62 PTVGHPNFKWVQPESEWD------PMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
T G + W+ +++NYTSGTT PKGV + HRG ++ + ++
Sbjct: 149 TTYGDLLARGSDDPLPWEVDDENRAISINYTSGTTGRPKGVQYTHRGAYLNSFGEVVHSA 208
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
V+LWTLPMFH NGW W + +GGT++CLR+V +I+ +I HGVTH+ GA
Sbjct: 209 HTPDTVYLWTLPMFHCNGWCTPWAVTGIGGTHVCLREVRGDVIWKLISEHGVTHLNGAPT 268
Query: 176 VLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAW 235
V+ + ++ LD + I T+GA P +L+ E +GF + H YGLTET G +
Sbjct: 269 VVTTIMNAAEAVKLDYQLVITTAGAPPSPTTILQMERMGFRIVHVYGLTETYGPYSVNQY 328
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ W+ L ERA L+ARQGV I + VV E + V DG + GEIV R ++M G
Sbjct: 329 QRAWDELDAEERAALQARQGVGMIQTDALRVVD-EHMVDVPRDGATMGEIVMRGNNVMAG 387
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y D EG+ WF++GD+GVVH DGY+E++DR+KDV+ISGGENIS+ EVE +
Sbjct: 388 YYDDPEGTEKAFA-GGWFHSGDLGVVHPDGYVELRDRAKDVVISGGENISTVEVEQAVVS 446
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ E A+V D+ WG+RP AFV LK P E +IE ++++ Y A + V I
Sbjct: 447 HPAVLEAAVVGVPDEQWGERPKAFVVLKGGQQTTPDE--VIEHVKSKIARYKAPRDVEIV 504
Query: 416 DELPKTATGKIQKFVLRE 433
DELPKT+TGK+QKF LRE
Sbjct: 505 DELPKTSTGKVQKFELRE 522
>gi|375106872|ref|ZP_09753133.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
gi|374667603|gb|EHR72388.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Burkholderiales bacterium JOSHI_001]
Length = 552
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 259/447 (57%), Gaps = 22/447 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVL-IHDDVSATSSPT 63
RLD ++ ++H E+++L D + +PL +AL L S V+ + D
Sbjct: 101 RLDAALLAWQMNHCEAQVLITDREFAPLMKSALQLLKSEHGRELVVIDVCDSEYTGPGDR 160
Query: 64 VGHPNFKWV----QP-------ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+G ++ + +P EWD +A++YTSGTT PKGVV HRG ++ V +
Sbjct: 161 LGAHEYEALLAAHEPLARLDGAADEWDAIAVSYTSGTTGDPKGVVTHHRGAYLNAVCNAA 220
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
W +P+ PV+LWTLPMFH NGW + W +A +GGT++CLR+V+ I ++ H V H C
Sbjct: 221 TWTMPHFPVYLWTLPMFHCNGWCFPWTVAMLGGTHVCLRRVEAAAILGAMREHKVDHYCA 280
Query: 173 ALVVLNMLSSSPS------TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
A +V +++ ++P + + V+ + +GA+PPA+++ +GF ++H YGLTE
Sbjct: 281 APIVHSLIFNAPDEMRAGLSGEGRQQVRGMVAGAAPPASMIEGMARIGFDITHVYGLTEV 340
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
G W+ + +E+ RL RQGVR + M V+ PET + DGQ+ GEI+
Sbjct: 341 YGPASVAVKHPHWSEQSLSEQTRLNGRQGVRYVLQEGMTVLDPETLADIPADGQTMGEIM 400
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
FR +M GYLK+ + + WF+TGD+ V+ +D Y++IKDRSKDVIISGGENISS
Sbjct: 401 FRGNIVMKGYLKNPNATHKAF-EGGWFHTGDLAVMEADRYVKIKDRSKDVIISGGENISS 459
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
EVE LY +PA+ A+VA+ D WG+ P A+V +K + T ++ C+ L Y
Sbjct: 460 IEVEDALYRHPAVLACAVVAKPDAKWGETPVAYVEIK--AGAQVTAADLVAHCKTLLAGY 517
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + E E+PKT+TGKIQKF LRE
Sbjct: 518 KVPREIRFE-EIPKTSTGKIQKFQLRE 543
>gi|295696172|ref|YP_003589410.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
gi|295411774|gb|ADG06266.1| AMP-dependent synthetase and ligase [Kyrpidia tusciae DSM 2912]
Length = 547
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 178/443 (40%), Positives = 262/443 (59%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL+ + +L+HS++KLL +D + + + P + + VL+ ++++ P +
Sbjct: 102 RLNPDDFAYILNHSDAKLLILDAEYAAVIEQIRDRLPG---IRQFVLVSRGAASSTLPHI 158
Query: 65 GHPNFKWVQPESEWDP----------MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
+ +W+ S DP + +NYTSGTTS PKGV+ HR ++ + L
Sbjct: 159 EYE--QWLSSASPDDPPAVDIDENQTLTINYTSGTTSRPKGVMLTHRNNYLNAANFLYHL 216
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
++ + ++L TLP+FH NGW W G T++CLRKVD I S+ +T +CGA
Sbjct: 217 QVIHDDMYLHTLPLFHVNGWGGVWATTGAGATHVCLRKVDPARIISLFNTEKITLLCGAP 276
Query: 175 VVLNMLSSSPSTKPLDR--PVKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTETAGFVV 231
VLNM+ ++ +DR P ++ +G+ PPAAVL R E L V H YG+TET+ F+
Sbjct: 277 TVLNMMVNAKEASEVDRSIPRRMAVAGSPPPAAVLKRAHELLALNVIHVYGMTETSPFIT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGM-SVKHDGQSQGEIVFRSG 290
C W +++L D ++A ++ARQG+ + ++ VV E V+ DGQ GEIV R
Sbjct: 337 YCEWNHHFDSLDDEQKATVRARQGIEQMFSGEVRVVSQEDPTWDVRWDGQEIGEIVTRGN 396
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GY K E ++ + D W +TGD+ VVH DGY+EI DR KD+IISGGENISS EVE
Sbjct: 397 AVMAGYYKQPEETAKTIIDG-WLHTGDLAVVHPDGYIEILDRQKDIIISGGENISSTEVE 455
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
V+Y +PAI E A++A D+ WG+ P A V +K S TE +I++CR RL H+ A K
Sbjct: 456 GVIYQHPAILEAAVIAVPDEKWGEVPKALVVVKPGFSL--TELELIKYCRERLAHFKAPK 513
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
SV + LP+TATGK+QKF LRE
Sbjct: 514 SVEFVESLPRTATGKLQKFKLRE 536
>gi|148653908|ref|YP_001281001.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PRwf-1]
gi|148572992|gb|ABQ95051.1| AMP-dependent synthetase and ligase [Psychrobacter sp. PRwf-1]
Length = 560
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/456 (37%), Positives = 254/456 (55%), Gaps = 32/456 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH-DDVSATSSPT 63
RLD ++ L HSE+K+L +D + + FP+ +LIH D++ P
Sbjct: 106 RLDINALTFCLQHSEAKVLIIDSEYAHHVELIEETFPN------LILIHATDMTLPDVPA 159
Query: 64 VGHPNFKW-------------------VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
G +++ + P EWD +ALNYTSGTT PKGVV+ HRG
Sbjct: 160 FGKMSYEALLQSGEFDSDEAIRAFDGTIYPTDEWDAIALNYTSGTTGKPKGVVYHHRGAT 219
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ +S+++DW +P +LWTLP+FH NGW + W +A G N+CLR++D +I +I
Sbjct: 220 LNALSNILDWDMPKHTTYLWTLPLFHCNGWCFPWTVAERAGINVCLRQIDANLILKLIAK 279
Query: 165 HGVTHICGALVVLNMLSSSPS--TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
+ +TH C A +V NM+++ S + ++ VK +GA P A+L + E++ F V+H YG
Sbjct: 280 YQITHYCAAPIVHNMIAAGDSQLQQAINHNVKGFVAGAPPSEAMLEKMEAMNFNVTHVYG 339
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQ 282
LTE G V CA +W L+ +ERA K+RQGV + ++ +V T V D
Sbjct: 340 LTEVYGPVTICAEHDEWQQLSVSERAAKKSRQGVVSHLMSGFEVFKQGTTEPVAADATEM 399
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE+ + +M GYLK+ + + WF TGD+GV + DGY++I DR KD+IISGGE
Sbjct: 400 GELALKGNMVMKGYLKNPKATKEAFA-GGWFRTGDLGVKYPDGYIKIMDRLKDIIISGGE 458
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
NISS E+E+ LY P ++ +VA + WG+ P AF+ + + T + +IE CR
Sbjct: 459 NISSIEIENTLYKMPEVSSCGVVAASNDKWGEVPVAFIEIAEGATL--TRDQVIEHCRQH 516
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
L + K VI E+PKT+TGKIQKF LR ++
Sbjct: 517 LAKFKVPKHVIF-CEIPKTSTGKIQKFELRNAAQSM 551
>gi|441209582|ref|ZP_20974267.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis MKD8]
gi|440627073|gb|ELQ88893.1| AMP-dependent synthetase and ligase [Mycobacterium smegmatis MKD8]
Length = 575
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 179/430 (41%), Positives = 253/430 (58%), Gaps = 9/430 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL ++ +L HSE+ +L D + L ++ +L V DD + +
Sbjct: 143 RLSAPEIAYMLGHSEASVLIYDPIFTDLVEQVRGQMSASPVL---VQAGDDPQSEYEQML 199
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
+ P E +++NYTSGTT PKGV++ HRG ++ ++ + + V+LW
Sbjct: 200 SAASPLRRTPSDELALLSVNYTSGTTGKPKGVMYSHRGAYLQALAMVGHTGLSPSAVYLW 259
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSP 184
TLPMFH NGW + W + A T++CLRKVD I+ +I+ GVTH+ GA VL+M++ +P
Sbjct: 260 TLPMFHCNGWCFPWAVTAAAATHVCLRKVDPSEIWRLIRQQGVTHLNGAPTVLSMIAHAP 319
Query: 185 STKPLD-RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLA 243
++ PV+I T GA P A+L R +LGF V+H YGLTET G C W+ +WN L
Sbjct: 320 EADTIEGTPVRIATGGAPPSPAILRRMSALGFDVTHLYGLTETYGPAAICDWRPEWNELD 379
Query: 244 DTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
RA++KARQGV + ++ VV E G + DG S GEI R ++M+GYL D +
Sbjct: 380 LEARAKIKARQGVGNMISCEIRVVA-EDGTDMPSDGASIGEIALRGNNVMVGYLHDPTAT 438
Query: 304 SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVA 363
D WF TGD+GV H DGY+E++DRSKDVIISGGENI+S EVE + +PA+ EVA
Sbjct: 439 EAAAPDG-WFRTGDLGVRHPDGYIELRDRSKDVIISGGENIASVEVEQAIMEHPAVLEVA 497
Query: 364 LVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTAT 423
++A D WG+ P A V+LK + T + II+ RA + + A K V ELPKT+T
Sbjct: 498 VIAVPDPQWGEVPAAHVALK--PGCEATADEIIDHVRATIARFKAPKHVFF-GELPKTST 554
Query: 424 GKIQKFVLRE 433
GK QK++LRE
Sbjct: 555 GKTQKYLLRE 564
>gi|108804872|ref|YP_644809.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
gi|108766115|gb|ABG04997.1| AMP-dependent synthetase and ligase [Rubrobacter xylanophilus DSM
9941]
Length = 523
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 176/437 (40%), Positives = 253/437 (57%), Gaps = 25/437 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + V +L HS ++ +F D LA A + + V I DD A P
Sbjct: 93 RLSPEEVGYILEHSGARFVFADAGLEHLASGAEA---------QRVRI-DDTGAEGDP-- 140
Query: 65 GHPNF--------KWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ +F + E + ++LNYTSGTT PKGV++ HRG ++ + ++I+ +
Sbjct: 141 -YEDFLAAAPPEPPESPLKDEEETISLNYTSGTTGRPKGVMYSHRGAYLCALGNVIEAGM 199
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+ +LWTLPMFH NGW+Y W + AV GT++CLR+V+ I+ + K G+TH C A V
Sbjct: 200 GYETRYLWTLPMFHCNGWTYPWAVTAVAGTHVCLRRVEPGRIWRLFKEEGITHYCAAPTV 259
Query: 177 LNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
+ + + L RPV+ + +GA P ++ L H YGLTET G + + A +
Sbjct: 260 QVGIINDEAAHRLPRPVRAMIAGAPPSPTLIAGLGDLNIDPVHIYGLTETYGPITTSAPR 319
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
+W L ERARL ARQG + AD+ V E V DG++ GEIV R +M GY
Sbjct: 320 KEWEELPAEERARLLARQGNAYV-TADIVRVVDENLQDVPRDGETMGEIVMRGNMVMKGY 378
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
+++E + + WF++GD+ V H DGY+EI+DR KD+IISGGENIS+ EVE + +
Sbjct: 379 FENEEATREAF-EGGWFHSGDVAVWHPDGYVEIRDRRKDIIISGGENISTIEVEQAVVSH 437
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
PA+ E A+VA D+ WG+RP AFV+LK TEE IIE C+A++ + A +V +
Sbjct: 438 PAVLECAVVAIPDEKWGERPKAFVTLK--KGHNATEEEIIEHCKAKIARFKAPSAVEFVE 495
Query: 417 ELPKTATGKIQKFVLRE 433
ELPKT+TGK+QKFVLRE
Sbjct: 496 ELPKTSTGKVQKFVLRE 512
>gi|222641946|gb|EEE70078.1| hypothetical protein OsJ_30069 [Oryza sativa Japonica Group]
Length = 492
Score = 311 bits (798), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 186/446 (41%), Positives = 246/446 (55%), Gaps = 71/446 (15%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHDDVSATSSPT 63
R D VSVLL HSE+K+ V+ Q +A AL L + P + I D ++SS
Sbjct: 97 RHDAAMVSVLLRHSEAKVFLVESQFLAVAHDALRLLADAKAKFPLVIAISDTGDSSSSDG 156
Query: 64 V----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
F+ P E DP++LNYTSGTTS PKGV++ HRG ++ ++++L+
Sbjct: 157 GGLEYEALLRDAPRGFEIRWPADERDPISLNYTSGTTSRPKGVIYSHRGAYLNSLAALLC 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + PV+LWT+PMFH NGW +W AA GGTN IC
Sbjct: 217 NDMTSMPVYLWTVPMFHCNGWCMAWATAAQGGTN----------------------IC-- 252
Query: 174 LVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
VL + E LGF V H YGLTET G C
Sbjct: 253 --------------------------------VLAKMEELGFNVQHGYGLTETYGPATRC 280
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
W+ +W+ L ERAR+KA QGV+ L D+D+ P T SV DG++ GE++ R ++M
Sbjct: 281 VWRPEWDALPLAERARIKALQGVQHQMLQDVDIKDPVTMASVPSDGRAVGEVMLRGNTVM 340
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY KD + MR W TGD+GV H DGY+++KDR+KD+IISGGENISS EVESVL
Sbjct: 341 SGYYKDAAATEEAMRGG-WLRTGDLGVRHPDGYIQLKDRAKDIIISGGENISSIEVESVL 399
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
+ + A+ + A+VA+ D WG+ CAFV+LK S T II FCRARLP YMA ++V+
Sbjct: 400 FGHHAVLDAAVVARPDDHWGETACAFVTLKDGASA--TAHEIIAFCRARLPRYMAPRTVV 457
Query: 414 IEDELPKTATGKIQKFVLREIVNAVN 439
D LPKT+TGK QKF+LRE A+
Sbjct: 458 FGD-LPKTSTGKTQKFLLREKARAMG 482
>gi|94442938|emb|CAJ91151.1| AMP-binding protein [Platanus x acerifolia]
Length = 208
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 145/209 (69%), Positives = 166/209 (79%), Gaps = 1/209 (0%)
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
P QPV+LWTLPMFH NGWS+ WGMAAVGGTNICLRK D IY I+ HGVTH+CGA VV
Sbjct: 1 PKQPVYLWTLPMFHANGWSFPWGMAAVGGTNICLRKFDAATIYGAIRKHGVTHMCGAPVV 60
Query: 177 LNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
LNML+++P L PV+ILT+GA PPAAVL RTE+LGFVVSH YGLTETAG VVSCAWK
Sbjct: 61 LNMLANAPDGASLSHPVQILTAGAPPPAAVLFRTEALGFVVSHGYGLTETAGLVVSCAWK 120
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
QWN TERA+LKARQGVR G+A++DVV P++G+SVK DG S GEIV R G IMLGY
Sbjct: 121 PQWNRFPATERAKLKARQGVRLAGMAEVDVVDPDSGVSVKRDGSSLGEIVLRGGCIMLGY 180
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDG 325
LKD +S M+ N WFYTGD+GV+H DG
Sbjct: 181 LKDPAATSKSMK-NGWFYTGDVGVIHPDG 208
>gi|375093692|ref|ZP_09739957.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
gi|374654425|gb|EHR49258.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Saccharomonospora marina XMU15]
Length = 539
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/444 (38%), Positives = 258/444 (58%), Gaps = 26/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS-PT 63
RL + +L HS +KLL VD A P++ + + V + D S ++
Sbjct: 95 RLAPAEIDYILRHSGAKLLVVDS-------ALHKSVPADPSVREIVTVTDPASGVAADAA 147
Query: 64 VGHPNFK------WVQP--------ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
VG ++ +P + E D +++NYTSGTT PKGV++ HRG ++ +++
Sbjct: 148 VGGISYADLLARGSAEPDEALPWAVDDERDTISINYTSGTTGRPKGVMYHHRGAYLNSLA 207
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
++ R ++ +LWTLPMFH NGW +W + A+GGT++CLR VD I+ ++ G+TH
Sbjct: 208 EIVHSRHTSESRYLWTLPMFHCNGWCTTWAITAIGGTHVCLRAVDAAEIWRLLDTEGITH 267
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+ GA VLN +++ P PL + V + T+GA P V+ R +LG + H YGLTET G
Sbjct: 268 LNGAPTVLNTIANYPQAHPLAQEVVVTTAGAPPSPTVISRMTALGAKLVHVYGLTETYGP 327
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C W+ W L R+RL ARQGV + + VV + V DG + GE+V R
Sbjct: 328 YTVCEWQDGWAKLDVESRSRLLARQGVGMVVTDGVRVVDDDMN-DVPRDGATMGEVVMRG 386
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GY DQE + R WF++GD+GV H DGY+E++DR+KD+I+SGGENIS+ EV
Sbjct: 387 NNVMSGYFADQEATEKAFR-GGWFHSGDLGVWHPDGYIELRDRAKDIIVSGGENISTIEV 445
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E+ + +PA+ EVA+V WG+RP A+V + + TE+ +++ R+++ Y
Sbjct: 446 EAAIDSHPAVLEVAVVGVPHDKWGERPKAYVVTR--SGESVTEQELLDHVRSQIARYKVP 503
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
+SV ELPKT+TGKIQKF LRE
Sbjct: 504 ESVEFVAELPKTSTGKIQKFQLRE 527
>gi|363419680|ref|ZP_09307778.1| o-succinylbenzoate--CoA ligase [Rhodococcus pyridinivorans AK37]
gi|359736787|gb|EHK85726.1| o-succinylbenzoate--CoA ligase [Rhodococcus pyridinivorans AK37]
Length = 508
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 173/429 (40%), Positives = 256/429 (59%), Gaps = 15/429 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L HS S++L V+ + LA A + PS T+ + DD +
Sbjct: 93 RLTAPELRFILEHSGSRVLLVEESLADLAREATADLPSITV------VGDDYE----DKL 142
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
+ V E +ALNYTSGTT PKGV++ RG ++ ++ + + + + +LW
Sbjct: 143 AAARHRCVPLADERTMIALNYTSGTTGDPKGVMYHARGAYLQALAMVAHFGLDSGSTYLW 202
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSP 184
TLPMFH NGW+++W + A GGT++CL KVD I+ +++ VTH+CGA VL L +P
Sbjct: 203 TLPMFHCNGWTFTWAVTAAGGTHVCLPKVDPERIWDLVRTENVTHLCGAPTVLASLVDAP 262
Query: 185 STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLAD 244
+ +D V GA P A++ R +LG ++H YGLTET G C W+S+W+ L +
Sbjct: 263 NAGGIDHRVVAAIGGAPPAPALIERCTALGLDITHLYGLTETYGPAAICEWRSEWDVLPE 322
Query: 245 TERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
E+ARL++RQGV + ++ +V P G V DG++ GEI R ++MLGY + + ++
Sbjct: 323 DEKARLRSRQGVGNVVAGELRIVDP-MGSDVPADGETTGEIALRGNNVMLGYYNNPDATA 381
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
+ D WF TGDIGV+H DGY+EI+DR+KDVIISGGENISS EVE+ L +PA+ E A+
Sbjct: 382 RAVPDG-WFRTGDIGVMHPDGYIEIRDRAKDVIISGGENISSVEVEAALISHPAVLEAAV 440
Query: 365 VAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATG 424
VA + WG+RP A+V+L+ S E + R++L + S++ LPKTA+G
Sbjct: 441 VAAPSEKWGERPVAYVALRSGASADEAE--LRAHVRSQLAGFKVPDSIVF-GALPKTASG 497
Query: 425 KIQKFVLRE 433
KI+K LRE
Sbjct: 498 KIRKVELRE 506
>gi|410453135|ref|ZP_11307096.1| AMP-binding enzyme [Bacillus bataviensis LMG 21833]
gi|409933642|gb|EKN70564.1| AMP-binding enzyme [Bacillus bataviensis LMG 21833]
Length = 530
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/446 (40%), Positives = 256/446 (57%), Gaps = 28/446 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL K + ++ HS++K+L VD + S A + L + +H TS V
Sbjct: 88 RLAAKDLEYIIRHSDAKMLIVDEEFS----APIEKIIEKLSLELIINVHVAGYETSLKGV 143
Query: 65 GHPNFKWVQPESEWDP---------MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
+ F P++ P + LNYTSGTTS PKGV+ HRG ++ + L
Sbjct: 144 DYEEFLRHAPQNAELPEVEIDENQLLTLNYTSGTTSKPKGVMLTHRGNYLNAANFLYHLN 203
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+ V+L TLPMFH NGW W + A GGT++CLRKVD P+I + + ++ +CGA
Sbjct: 204 VKPDDVYLHTLPMFHANGWGGVWAITAAGGTHVCLRKVDPPLILELFEQKNISLLCGAPT 263
Query: 176 VLNMLSSSPSTKPLDRPVKILTS-------GASPPAAVLLRTESLGFVVSHSYGLTETAG 228
V+NML + P K VKI TS A + E LG + H YGLTET+
Sbjct: 264 VVNMLVNDPKAK----EVKIKTSPRMATAGAPPAAALIHKAQEILGLNMVHVYGLTETSP 319
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
F++ C WK +++ + E+A +KARQG+ + VVH + G V +G+ GEI+ R
Sbjct: 320 FILYCEWKKEFDLKSADEQATIKARQGIELAFNGETKVVH-QDGAEVAWNGRELGEIITR 378
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M GY KD + ++ +RD WF+TGD+ V + DG++EI+DR+KD+IISGGENISS E
Sbjct: 379 GNVVMAGYYKDPQTTAAAIRDG-WFHTGDLAVTYPDGFIEIQDRAKDLIISGGENISSTE 437
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +PA+ E A++A D+ WG+ P A + L+ + TE II+FCR + H+ A
Sbjct: 438 VEGVLYKHPAVLETAVIAIPDEKWGEVPKAIIVLQQ--NAIVTEVEIIQFCRENMAHFKA 495
Query: 409 HKSVIIEDELPKTATGKIQKFVLREI 434
K+V D LPKTATGK+QK+ LRE+
Sbjct: 496 PKAVEFVDALPKTATGKLQKYRLREM 521
>gi|452961403|gb|EME66705.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus ruber BKS
20-38]
Length = 551
Score = 307 bits (786), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 251/443 (56%), Gaps = 21/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ---------SSPLALAALSLFPSNTI----LPKPVL 51
RL + +L H+E+ LLFVD + S +L + P +T+ +P ++
Sbjct: 108 RLAGPELEYILGHAEASLLFVDSEFVGSVAGVADSVPSLTEVVEVPDSTVPYPDVPAGIV 167
Query: 52 I--HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
+D+ A + G P V E + + LNYTSGTT PKGV++ HRG ++ +
Sbjct: 168 TARYDEFLAAADGLDGTPLHWGVDDEEQV--ITLNYTSGTTGKPKGVMYTHRGAYLNSFG 225
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+ +LWTLPMFH NGW W + A GGT+ICLR V I+ + + GVT+
Sbjct: 226 ETFHNGFDGKTQYLWTLPMFHCNGWCTPWAVTAAGGTHICLRAVRADAIWDAVDNLGVTN 285
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+CGA V + ++ +P LDRP++I T+GA P V+ + E +G V H YGLTE G
Sbjct: 286 LCGAPAVCSTIAEAPQAHRLDRPLRITTAGAPPSPTVIAQLEKIGVTVVHVYGLTEVYGP 345
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C ++ W+ ERA L +RQGV + + VV V DGQ+ GEIV R
Sbjct: 346 YTICEYQDSWDDKPAEERAALLSRQGVGMLQAENARVVDANMN-DVPADGQTMGEIVLRG 404
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GY KD E ++ + WF+TGD+GV++ DGY+++KDR+KD+IISGGENIS+ EV
Sbjct: 405 NNVMAGYFKDPEATAKAF-EGGWFHTGDLGVMYPDGYIQLKDRAKDIIISGGENISTVEV 463
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E + +PA+ +VA+V D+ WG+RP AFV LK + + T E +I + R L Y
Sbjct: 464 EQAIVSHPAVLDVAVVGVPDEKWGERPKAFVILKKD--ETVTAEELISYTRTLLAGYKVP 521
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
+ ++ +LP+T TGKI KF LR
Sbjct: 522 REIVFPLDLPRTPTGKILKFELR 544
>gi|184201740|ref|YP_001855947.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
gi|183581970|dbj|BAG30441.1| putative fatty-acid--CoA ligase [Kocuria rhizophila DC2201]
Length = 571
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 215/354 (60%), Gaps = 4/354 (1%)
Query: 80 PMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWG 139
P+ LNYTSGTT PKGV++ HRG ++ ++ + +LWTLPMFH NGW +W
Sbjct: 222 PITLNYTSGTTGRPKGVLYSHRGAYLNSLGEVFHNGFTGDTRYLWTLPMFHCNGWCTTWA 281
Query: 140 MAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSG 199
+ A GGT++CLR V ++S H +TH+CGA V + + + PLDR ++I T+G
Sbjct: 282 VTAAGGTHVCLRAVRAQDVWSAFDEHAITHLCGAPAVCSTIVDAQEAHPLDRRIRITTAG 341
Query: 200 ASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTI 259
A P +++ R E GF + H YGLTE G + C + QW L +ERAR +RQGV I
Sbjct: 342 APPAPSIIERLEQAGFDIVHVYGLTEVFGPITICEPQEQWAELPASERARQMSRQGVAMI 401
Query: 260 GLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIG 319
VV PE V DG+S GE+V R ++M+GY +D + D WF+TGD+G
Sbjct: 402 QAESARVVDPEM-QDVPADGESLGEVVLRGNNVMIGYYRDVTATRKAF-DGGWFHTGDLG 459
Query: 320 VVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAF 379
V+H +GY+++ DR+KDVIISGGENISS EVE LY +P + +VA+V + WG+RP A
Sbjct: 460 VMHPNGYIQLTDRAKDVIISGGENISSIEVEQALYSHPDVLDVAVVGVPHEKWGERPVAH 519
Query: 380 VSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
V TEE + E R++L + SV DELP+TATGK++K +LR+
Sbjct: 520 VVRAG--GSTVTEEQLREHVRSQLSGFKVPDSVTFTDELPRTATGKVRKNLLRD 571
>gi|441206043|ref|ZP_20972834.1| acsA3 [Mycobacterium smegmatis MKD8]
gi|440628591|gb|ELQ90387.1| acsA3 [Mycobacterium smegmatis MKD8]
Length = 515
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/357 (45%), Positives = 221/357 (61%), Gaps = 5/357 (1%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWS 135
E D +A+NYTSGTT PKGV++ HRG ++ V+ R+ +LWTLPMFH NGW
Sbjct: 155 GERDLLAINYTSGTTGRPKGVMYHHRGAYLQAVAMAYHTRLDPSTGYLWTLPMFHCNGWC 214
Query: 136 YSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKI 195
++W + A GGT+ICLRK+D I+ +++ G+TH A VL M++ PS +PL V +
Sbjct: 215 FTWAVGAAGGTHICLRKIDSAEIWRLLRGGGITHFSAAPTVLTMIAEDPSAQPLPARVHV 274
Query: 196 LTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQG 255
T GA P A+L R LGF V+H YGLTET G V W+ +W+ L D E+ARL+ARQG
Sbjct: 275 DTGGAPPSPALLARLTPLGFDVTHLYGLTETYGPVAVNVWQPEWDELPDDEQARLRARQG 334
Query: 256 VRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYT 315
V I + VV G V DG + GEI R +MLGY D +S RD +F T
Sbjct: 335 VGNIIANPLRVVD-LGGDDVPRDGTTIGEIAARGNDVMLGYYNDDAATSAATRDG-YFLT 392
Query: 316 GDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKR 375
GD+ V+H DGY+EI+DR+KDVIISGGENI+S E+E V+ +P + E A+V D+ WG+
Sbjct: 393 GDLAVMHPDGYVEIRDRAKDVIISGGENIASIEIEKVIDSHPEVVESAVVGVADEKWGEV 452
Query: 376 PCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
P AF++ + T + + F R L + ++++ D LPKT+TGKIQK VLR
Sbjct: 453 PVAFITRR--DGSDVTFDELSTFLRGHLAGFKVPRTMVF-DHLPKTSTGKIQKNVLR 506
>gi|403509265|ref|YP_006640903.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
gi|402799341|gb|AFR06751.1| AMP-binding enzyme family protein [Nocardiopsis alba ATCC BAA-2165]
Length = 523
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 172/377 (45%), Positives = 232/377 (61%), Gaps = 10/377 (2%)
Query: 67 PNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWT 125
P F+ +PE +E D + +NYTSGTT+ PKGV+ HR ++ +V +L+ RI +LWT
Sbjct: 151 PGFE--RPEIAETDLLTINYTSGTTARPKGVMITHRNAYMNSVGTLLHLRIELGQRYLWT 208
Query: 126 LPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPS 185
LPMFH NGW+Y+W + A GGT++CL +D ++ +I+ V+ +C A VL ML+++P
Sbjct: 209 LPMFHANGWTYTWTVTAAGGTHVCLPAMDPARVFELIREEEVSWLCAAPTVLIMLANTPE 268
Query: 186 TKPLDRP--VKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTL 242
D P V ++T+GASP A + R E G+ V+H YGLTET F+ C + + L
Sbjct: 269 GVRGDVPSGVHVVTAGASPAAETIERLEGDFGWTVTHVYGLTETTPFITVCERRPEHEGL 328
Query: 243 ADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEG 302
+ ER LKARQGV I ++ VV E G V DG++ G+I R +M GY D E
Sbjct: 329 STRERGALKARQGVELITSGELRVVDDE-GAEVPWDGRTVGQITVRGNVVMSGYYNDPEA 387
Query: 303 SSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEV 362
+ M D WF+TGD V H DGY+EI+DR KDVIISGGENISS EVE VL +PA+ EV
Sbjct: 388 TEKAMGDG-WFHTGDAAVTHPDGYVEIQDRIKDVIISGGENISSVEVEGVLLRHPAVLEV 446
Query: 363 ALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTA 422
A+V + WG+ P A V L+ + TE+ II F R L H+ A V + LPKTA
Sbjct: 447 AIVGVPHERWGETPRASVVLR--EGETATEKEIIAFARDNLAHFKAPTQVEFVESLPKTA 504
Query: 423 TGKIQKFVLREIVNAVN 439
TGKIQK+VLR +AV
Sbjct: 505 TGKIQKYVLRGGASAVT 521
>gi|407276714|ref|ZP_11105184.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus sp. P14]
Length = 547
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 250/443 (56%), Gaps = 21/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ---------SSPLALAALSLFPSNTI----LPKPVL 51
RL + +L H+E+ LLFVD + S +L + P +T+ +P ++
Sbjct: 104 RLAGPELEYILGHAEASLLFVDSEFVGSVAGVADSVPSLTEVVEVPDSTVPYPDVPAGIV 163
Query: 52 I--HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
+D+ A + P V E + + LNYTSGTT PKGV++ HRG ++ +
Sbjct: 164 TARYDEFLAAADGLDDTPLHWGVDDEEQV--ITLNYTSGTTGKPKGVMYTHRGAYLNSFG 221
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+ +LWTLPMFH NGW W + A GGT+ICLR V I+ I + GVT+
Sbjct: 222 ETFHNAFDGKTQYLWTLPMFHCNGWCTPWAVTAAGGTHICLRAVRADAIWDAIDNLGVTN 281
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+CGA V + ++ +P LDRP++I T+GA P V+ + E +G V H YGLTE G
Sbjct: 282 LCGAPAVCSTIAEAPQAHRLDRPLRITTAGAPPSPTVIAQLEKIGVTVVHVYGLTEVYGP 341
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C ++ W+ ERA L +RQGV + + VV V DGQ+ GEIV R
Sbjct: 342 YTICEYQDSWDDKPAEERAALLSRQGVGMLQAENARVVDANMN-DVPADGQTMGEIVLRG 400
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GY KD E ++ + WF+TGD+GV++ DGY+++KDR+KD+IISGGENIS+ EV
Sbjct: 401 NNVMAGYFKDPEATAKAF-EGGWFHTGDLGVMYPDGYIQLKDRAKDIIISGGENISTVEV 459
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E + +PA+ +VA+V D+ WG+RP AFV LK + + T E +I + R L Y
Sbjct: 460 EQAIVSHPAVLDVAVVGVPDEKWGERPKAFVILKKD--ETVTAEELISYTRTLLAGYKVP 517
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
+ ++ +LP+T TGKI KF LR
Sbjct: 518 REIVFPLDLPRTPTGKILKFELR 540
>gi|146279762|ref|YP_001169920.1| hypothetical protein Rsph17025_3751 [Rhodobacter sphaeroides ATCC
17025]
gi|145558003|gb|ABP72615.1| hypothetical protein Rsph17025_3751 [Rhodobacter sphaeroides ATCC
17025]
Length = 549
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/367 (46%), Positives = 231/367 (62%), Gaps = 8/367 (2%)
Query: 71 WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFH 130
W P+SEWDP+A+NYTSGTT +PKGVV HRG + ++++ + + +LWTLP FH
Sbjct: 175 WRLPDSEWDPIAVNYTSGTTGNPKGVVLHHRGAHLAALANMAVLGLRSDSRYLWTLPAFH 234
Query: 131 ENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML----SSSPST 186
NGWS W AA G T +CL +VD I + I+ +TH+C A VVL M+ P
Sbjct: 235 CNGWSGIWAAAAAGTTQVCLPRVDPVAILNRIEEAAITHLCAAPVVLTMILNVRDGVPER 294
Query: 187 KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTE 246
P RPV I T GA+P +AVL + GF V H YG+TE+ G CA ++ W LA +
Sbjct: 295 GPGSRPVIIGTGGAAPTSAVLAAAAARGFDVIHMYGMTESYGPTTVCAPQAAWADLAPAD 354
Query: 247 RARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLC 306
A ++ARQGV + + D+ V+ PE G DG++ GEI FR ++MLGYLK+ ++
Sbjct: 355 LAAVRARQGVPLVAVEDVTVIDPE-GRPAPADGRTLGEIAFRGNTVMLGYLKNPAATAET 413
Query: 307 MRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVA 366
+ W TGD+GV+H DGYLE+KDR+KD+IISGGENISS EVE VL + A+ E A+VA
Sbjct: 414 LA-GGWLRTGDLGVLHPDGYLEVKDRAKDIIISGGENISSLEVEEVLSRHAAVLEAAVVA 472
Query: 367 QRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKI 426
+ FWG+ P AFV+L+ + PT +I + R L H+ + V+ D LPKTATGKI
Sbjct: 473 EPHPFWGESPAAFVTLRAD-GPAPTGADLIAWVRDHLAHFKVPRRVVFRD-LPKTATGKI 530
Query: 427 QKFVLRE 433
QK VLRE
Sbjct: 531 QKSVLRE 537
>gi|297842385|ref|XP_002889074.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334915|gb|EFH65333.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 549
Score = 305 bits (781), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 172/441 (39%), Positives = 266/441 (60%), Gaps = 17/441 (3%)
Query: 6 LDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP--- 62
+ + +++ L ++ K+ FVD + +A +LSL + P + I ++ + S
Sbjct: 98 FNSQMLAMALEKTKPKVFFVDSEFLSVAEESLSLLSNIEEQPLIITITENQTEKSKYEEY 157
Query: 63 ----TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
+ G+PNF ++P E DP+ALN+TSGTTS+PK VV+ HRG ++ ++ + +
Sbjct: 158 EDFLSSGNPNFIPLRPVDECDPIALNFTSGTTSTPKCVVYSHRGAYLNATATGVMNEMKP 217
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
PV+LWT+PM+H +GWS W +AA GG N+CLR+V+ +I+ I H VT+ G+ VLN
Sbjct: 218 MPVYLWTVPMYHCSGWSSVWTVAAFGGVNVCLREVNDRVIFDSIVKHKVTNFGGSPPVLN 277
Query: 179 MLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWK 236
M++++P + P V++++ G+SPP V+LR + LGF V +YG TE G +C W
Sbjct: 278 MIANAPDSVKKSFPWTVQVMSGGSSPP-EVMLRLKKLGFKVMMAYGCTEVYGLGTACLWM 336
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
+W L + E +RLKAR G+ +DV+ P T SV HDG++ G I+ R ++M GY
Sbjct: 337 PEWENLPEEESSRLKARDGLNHFAKEAVDVLDPTTMKSVPHDGKTIGVIILRGNTVMSGY 396
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
KD+E + R WF++ D+GV+ DGY++ KDRS+DVI GGE + S E+E +LY +
Sbjct: 397 FKDKEATEAAFR-GGWFWSRDMGVIDPDGYIQYKDRSQDVITCGGEIMGSKEIEGILYSH 455
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL---PHYMAHKSVI 413
PA+ + A+V + D+ G+ CAFV L + EE IIEFC ++ M K+V+
Sbjct: 456 PAVYDAAVVGRPDEALGESMCAFVKLIE--GAEAKEEEIIEFCERKIGIKNMKMVPKTVV 513
Query: 414 IEDELPKTATGKIQKFVLREI 434
D +PK TGKI+K VLRE+
Sbjct: 514 FSD-VPKIHTGKIRKNVLREM 533
>gi|378549489|ref|ZP_09824705.1| hypothetical protein CCH26_05360 [Citricoccus sp. CH26A]
Length = 557
Score = 304 bits (779), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 168/446 (37%), Positives = 244/446 (54%), Gaps = 24/446 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ----------SSPLALAALSLFPSNTILPKPV---- 50
RL + ++ +L HSE++++F D + P A + + PV
Sbjct: 110 RLTARELAYILEHSEARVVFADGDVVATVRDVVGNLPQAPLVVEIVDPEAGHAGPVDADA 169
Query: 51 --LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
L ++D A P+ W + E P+ LNYTSGTT PKG ++ HRG ++
Sbjct: 170 GSLTYEDFLAQGP---AGPDLPW-RVADEHAPITLNYTSGTTGPPKGALYTHRGAYLAAE 225
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
++ +LWTLPMFH NGW W + + GT++CLR V I+ H G+T
Sbjct: 226 GAVFHNGYTGATRYLWTLPMFHCNGWCTPWAVTSAAGTHVCLRAVRQDAIWDAFDHEGIT 285
Query: 169 HICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
H+CGA +V M+ S +PLDR +++ T+GA+PP +V+ ESL H YGLTE G
Sbjct: 286 HLCGAPIVCAMIHESERARPLDRELRMTTAGAAPPPSVIEALESLNITPVHVYGLTEVYG 345
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C + W L ERARL ARQGV + ++ V+ + V DG++ GE+V R
Sbjct: 346 PFTICEPQPAWARLPAAERARLMARQGVPMVHAGEVAVMDADLN-RVPADGETLGEVVLR 404
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M Y K+ E ++ R W++TGD+GV+H DGY+++ DR+KD+IISGGENISS E
Sbjct: 405 GNGVMKEYFKNPEATAEAFR-GGWYHTGDLGVMHPDGYIQLMDRAKDIIISGGENISSIE 463
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VL+ +P +++VA+V +D WG+RP AFV E + T E + CR L +
Sbjct: 464 VEGVLHAHPKVSDVAVVGVQDDRWGERPVAFVVT--EAGAQVTAEELRAHCRQGLAGFKV 521
Query: 409 HKSVIIEDELPKTATGKIQKFVLREI 434
V ELP+TATGKI+K LR +
Sbjct: 522 PDRVEFVQELPRTATGKIRKNTLRAL 547
>gi|146276839|ref|YP_001166998.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17025]
gi|145555080|gb|ABP69693.1| AMP-dependent synthetase and ligase [Rhodobacter sphaeroides ATCC
17025]
Length = 549
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/367 (46%), Positives = 234/367 (63%), Gaps = 8/367 (2%)
Query: 71 WVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFH 130
W P+SEWDP+A+NYTSGTT +PKGVV HRG + ++++ + + +LWTLP FH
Sbjct: 175 WRLPDSEWDPIAVNYTSGTTGNPKGVVLHHRGAHLAALANMAVLGLRSDSRYLWTLPAFH 234
Query: 131 ENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML----SSSPST 186
NGWS W AA G T +CL +VD I + I+ +TH+C A VVL M+ P
Sbjct: 235 CNGWSGIWAAAAAGTTQVCLPRVDPVAILNRIEEAAITHLCAAPVVLTMILNIRDGVPER 294
Query: 187 KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTE 246
P RPV I T GA+P +AVL + GF V H YG+TE+ G CA ++ W LA +
Sbjct: 295 GPGSRPVIIGTGGAAPTSAVLAAAAARGFDVIHMYGMTESYGPTTVCAPQAAWADLAPAD 354
Query: 247 RARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLC 306
A ++ARQGV + + D+ V+ P+ G + DG++ GEI FR ++MLGYLK+ ++
Sbjct: 355 LAAVRARQGVPLVAVEDVTVLDPD-GRPIPADGRTLGEIAFRGNTVMLGYLKNPAATAET 413
Query: 307 MRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVA 366
+ W TGD+GV+H DGY+E+KDR+KD+IISGGENISS EVE +L + A+ E A+VA
Sbjct: 414 LA-GGWLRTGDLGVLHPDGYVEVKDRAKDIIISGGENISSLEVEEILSRHAAVVEAAVVA 472
Query: 367 QRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKI 426
+ FWG+ P AFV+L+ ++ PT +I + R L H+ A + V+ +D LPKTATGKI
Sbjct: 473 EPHPFWGESPAAFVTLRADV-PAPTGADLIAWVRDHLAHFKAPRRVVFQD-LPKTATGKI 530
Query: 427 QKFVLRE 433
QK LRE
Sbjct: 531 QKATLRE 537
>gi|118470199|ref|YP_886346.1| acyl-CoA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|118171486|gb|ABK72382.1| acyl-CoA synthase [Mycobacterium smegmatis str. MC2 155]
Length = 515
Score = 304 bits (778), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 219/357 (61%), Gaps = 5/357 (1%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWS 135
E D +A+NYTSGTT PKGV++ HRG ++ V+ R+ +LWTLPMFH NGW
Sbjct: 155 GERDLLAINYTSGTTGRPKGVMYHHRGAYLQAVAMAYHTRLDPSTGYLWTLPMFHCNGWC 214
Query: 136 YSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKI 195
++W + A GGT+ICLRK+D I+ ++ G+TH A VL M++ PS +PL V +
Sbjct: 215 FTWAVGAAGGTHICLRKIDSAEIWRWLRGGGITHFSAAPTVLTMIAEDPSAQPLPARVHV 274
Query: 196 LTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQG 255
T GA P A+L R LGF V+H YGLTET G V W+ +W+ L D E+ARL+ARQG
Sbjct: 275 DTGGAPPSPALLARLTPLGFDVTHLYGLTETYGPVAVNVWQPEWDELPDDEQARLRARQG 334
Query: 256 VRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYT 315
V I + VV G V DG + GEI R +MLGY D +S RD +F T
Sbjct: 335 VGNIIANPLRVVD-LGGDDVPRDGTTIGEIAARGNDVMLGYYNDDAATSAATRDG-YFLT 392
Query: 316 GDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKR 375
GD+ +H DGY+EI+DR+KDVIISGGENI+S E+E V+ +P + E A+V D+ WG+
Sbjct: 393 GDLAAMHPDGYVEIRDRAKDVIISGGENIASIEIEKVIDSHPEVVESAVVGVADEKWGEV 452
Query: 376 PCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
P AF++ + T + + F R L + ++++ D LPKT+TGKIQK VLR
Sbjct: 453 PVAFITRR--DGSDVTFDQLTTFLREHLAGFKVPRTMVF-DHLPKTSTGKIQKNVLR 506
>gi|399986355|ref|YP_006566704.1| acyl CoA synthetase, AMP-binding protein [Mycobacterium smegmatis
str. MC2 155]
gi|399230916|gb|AFP38409.1| Acyl CoA synthetase, AMP-binding protein [Mycobacterium smegmatis
str. MC2 155]
Length = 534
Score = 303 bits (777), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 219/357 (61%), Gaps = 5/357 (1%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWS 135
E D +A+NYTSGTT PKGV++ HRG ++ V+ R+ +LWTLPMFH NGW
Sbjct: 174 GERDLLAINYTSGTTGRPKGVMYHHRGAYLQAVAMAYHTRLDPSTGYLWTLPMFHCNGWC 233
Query: 136 YSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKI 195
++W + A GGT+ICLRK+D I+ ++ G+TH A VL M++ PS +PL V +
Sbjct: 234 FTWAVGAAGGTHICLRKIDSAEIWRWLRGGGITHFSAAPTVLTMIAEDPSAQPLPARVHV 293
Query: 196 LTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQG 255
T GA P A+L R LGF V+H YGLTET G V W+ +W+ L D E+ARL+ARQG
Sbjct: 294 DTGGAPPSPALLARLTPLGFDVTHLYGLTETYGPVAVNVWQPEWDELPDDEQARLRARQG 353
Query: 256 VRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYT 315
V I + VV G V DG + GEI R +MLGY D +S RD +F T
Sbjct: 354 VGNIIANPLRVVD-LGGDDVPRDGTTIGEIAARGNDVMLGYYNDDAATSAATRDG-YFLT 411
Query: 316 GDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKR 375
GD+ +H DGY+EI+DR+KDVIISGGENI+S E+E V+ +P + E A+V D+ WG+
Sbjct: 412 GDLAAMHPDGYVEIRDRAKDVIISGGENIASIEIEKVIDSHPEVVESAVVGVADEKWGEV 471
Query: 376 PCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
P AF++ + T + + F R L + ++++ D LPKT+TGKIQK VLR
Sbjct: 472 PVAFITRR--DGSDVTFDQLTTFLREHLAGFKVPRTMVF-DHLPKTSTGKIQKNVLR 525
>gi|258650301|ref|YP_003199457.1| AMP-dependent synthetase and ligase [Nakamurella multipartita DSM
44233]
gi|258553526|gb|ACV76468.1| AMP-dependent synthetase and ligase [Nakamurella multipartita DSM
44233]
Length = 541
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/445 (38%), Positives = 251/445 (56%), Gaps = 26/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVS--ATSSP 62
RL + +L+HSE+KLLFVD + +L+ P+ T + + I D A S
Sbjct: 93 RLAKAEIDYILNHSEAKLLFVDAELVATVGNSLAAAPALTGV---IEIADAEFGLAASGL 149
Query: 63 TVGHPNFKWVQPESEWDPMA---------------LNYTSGTTSSPKGVVHCHRGLFIIT 107
VG ++ E+ DP A +NYTSGTT PKGV++ HRG ++ +
Sbjct: 150 DVGQQSYASFLAEA--DPAAAPLPWTVADERTVISINYTSGTTGKPKGVMYTHRGAYLNS 207
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
++ + V+LWTLPMFH NGW W + G T++CLR V ++S + GV
Sbjct: 208 FGEIVHNQFTGDSVYLWTLPMFHCNGWCTPWAVTGAGATHVCLRAVRADAVWSALDGLGV 267
Query: 168 THICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
TH+CGA V ++++ + PLDRP++I T+GA P V+ + + LG V H YGLTE
Sbjct: 268 THLCGAPTVCSIIADAGQAHPLDRPMRITTAGAPPSPTVIEKLDRLGVTVVHVYGLTEVY 327
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G C ++ +W+ L +RAR +RQGV + VV E + V DG + GEIV
Sbjct: 328 GPFTICEYQREWDDLPPADRARRLSRQGVGMLQAESARVVD-EQLVDVPADGITIGEIVL 386
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R ++M GY KD + R WF++GD+GV+H DGY+E+KDR+KD+IISGGENIS+
Sbjct: 387 RGNNVMAGYFKDDAATEQAFR-GGWFHSGDLGVMHPDGYIELKDRAKDIIISGGENISTI 445
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE+ + +PA+ E A++ WG+RP AFV ++ + + + AI++ + + +
Sbjct: 446 EVENAVLSHPAVAEAAVIGMPSVKWGERPRAFVVVRPGV--EVSSAAILDHVKGLIAKFK 503
Query: 408 AHKSVIIEDELPKTATGKIQKFVLR 432
VI D LP+TATGKI+K LR
Sbjct: 504 VPDEVIFVDVLPRTATGKIRKNELR 528
>gi|392416776|ref|YP_006453381.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|390616552|gb|AFM17702.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 535
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 223/357 (62%), Gaps = 5/357 (1%)
Query: 77 EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSY 136
E D +A+NYTSGTT PKGV++ HRG ++ V+ + +LWTLPMFH NGW +
Sbjct: 159 ERDLLAINYTSGTTGRPKGVMYHHRGAYLQAVAMAFHADLGPASNYLWTLPMFHCNGWCF 218
Query: 137 SWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKIL 196
+W + A GGT++CLR++D +I+ ++ VTH+ A VL M++ P+ L R V +
Sbjct: 219 TWAVTAAGGTHVCLRRIDPSVIWRQLREADVTHLSAAPTVLAMIAEDPAAGQLPRRVHVD 278
Query: 197 TSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGV 256
T GA P A+L R + LGF V+H YGLTET G V W+ +W+ L TE ARL+ARQG+
Sbjct: 279 TGGAPPSPALLERLDPLGFDVTHLYGLTETYGPVAVNVWQPEWDRLDPTEAARLRARQGI 338
Query: 257 RTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTG 316
I + V+ +G+ V DGQ+ GEI ++MLGY +D+ ++ R F TG
Sbjct: 339 GNIIARPLRVLD-TSGVDVAPDGQTIGEIAVSGNNVMLGYYRDERATAAVTRSG-CFLTG 396
Query: 317 DIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRP 376
D+GV+HSDGY+EI+DR+KDVIISGGENI+S E+E L +P + E A+V WG+ P
Sbjct: 397 DLGVMHSDGYVEIRDRAKDVIISGGENIASVELERALDTHPEVLESAVVGVPHPHWGEVP 456
Query: 377 CAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
AFV+ + S TE + + R R+ + K++ D LPKT+TGKIQK VLRE
Sbjct: 457 VAFVTRR--TSATVTEVELTTYLRERVAAFKVPKAIAFAD-LPKTSTGKIQKNVLRE 510
>gi|325001401|ref|ZP_08122513.1| long-chain-fatty-acid--CoA ligase [Pseudonocardia sp. P1]
Length = 540
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/436 (39%), Positives = 248/436 (56%), Gaps = 11/436 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVD---YQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS 61
RL + V +L HS +K+L VD Y++ L + P D V + S
Sbjct: 96 RLSTEEVRYILDHSGAKVLVVDAVLYETVRPVAGELETVREIVTVTDPAAPGDGVGSGLS 155
Query: 62 PT----VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G + + E +++NYTSGTT PKGV + HRG ++ + ++
Sbjct: 156 YADLLARGSDTPRPWAVDDERGTISINYTSGTTGHPKGVEYHHRGAYLNSFGEIVHSTHT 215
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
V+LWTLPMFH NGW W + A+GGT++CLR+V +I+ +I HGVTH+ GA V+
Sbjct: 216 PDSVYLWTLPMFHCNGWCTPWAVTAIGGTHVCLREVRGDVIWGLISEHGVTHLNGAPTVV 275
Query: 178 NMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKS 237
+ ++P LD P+ I T+GA P +L+ E +GF + H YGLTET G ++
Sbjct: 276 TTIMNAPEAVTLDYPLVITTAGAPPSPTTILQMERMGFRIVHVYGLTETYGPYSVNQYQR 335
Query: 238 QWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYL 297
W+ L ERARL+ARQGV + AD V E V DG + GEIV R ++M GY
Sbjct: 336 AWDGLDGEERARLQARQGVGMV-CADRLRVVDEQMADVPADGATMGEIVMRGNNVMKGYH 394
Query: 298 KDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
D E ++ WF++GD+GVVH DGY+E++DR+KDV+ISGGENIS+ EVE + +
Sbjct: 395 LDDEKTAEAFA-GGWFHSGDLGVVHPDGYVELRDRAKDVVISGGENISTVEVEQAIVSHE 453
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDE 417
A+ E A+V D+ WG+ AF L+ + +P E +I+ + R+ Y A K V + +E
Sbjct: 454 AVLEAAVVGVPDERWGEVCKAFAVLRPGRAAEPQE--LIDHVKTRIARYKAPKYVEVVEE 511
Query: 418 LPKTATGKIQKFVLRE 433
LPKT+TGK+QKF LRE
Sbjct: 512 LPKTSTGKVQKFELRE 527
>gi|125570262|gb|EAZ11777.1| hypothetical protein OsJ_01648 [Oryza sativa Japonica Group]
Length = 620
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/394 (41%), Positives = 231/394 (58%), Gaps = 30/394 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFP-SNTILPKPVLIHD--DVSATSS 61
RLD +VLL HSE+K++FVD +A AL L + P VLI + D + S
Sbjct: 131 RLDAAMAAVLLRHSEAKVVFVDRALLGVAQKALVLVAEAGARRPVLVLISELLDENERSP 190
Query: 62 PTV---------------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCH 100
P P+F P E +P+ALNYTSGTTS PKGV++ H
Sbjct: 191 PDAKIKVTRVDYEYEHLLSAAAAGSSPDFAIRWPADENEPIALNYTSGTTSRPKGVIYSH 250
Query: 101 RGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYS 160
RG ++ +++++I + PV+LWT+PMFH NGW WG+AA GGTN+C+R+V I+
Sbjct: 251 RGAYLSSLAAVIVNAMAETPVYLWTVPMFHCNGWCQVWGVAAQGGTNVCVRRVTAAAIFD 310
Query: 161 VIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHS 220
+ HGVTH+ GA VL+M+ ++ + + + G VL R E GF+V HS
Sbjct: 311 SVARHGVTHMGGAPTVLSMIVNATADE-----RRRQPGGRRRRVTVLFRMEEQGFLVIHS 365
Query: 221 YGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQ 280
YGLTET G C WK +W+ L ERAR+K+RQG+ +GL DV P T SV DG+
Sbjct: 366 YGLTETYGPATVCTWKPEWDALTAEERARIKSRQGLHHVGLEAADVKDPATMRSVPADGR 425
Query: 281 SQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISG 340
+ GE++ R ++M GY KD G++ W +GD+ V DGY++I DRSKD+IISG
Sbjct: 426 TVGEVMLRGNTVMSGYYKDG-GATAEALAGGWLRSGDLAVREEDGYIKILDRSKDIIISG 484
Query: 341 GENISSAEVESVLYMNPAINEVALVAQRDKFWGK 374
GENIS+ EVE+ L+ +PA+ E A+V + D++WG+
Sbjct: 485 GENISTVEVEAALFGHPAVEEAAVVGRPDEYWGR 518
>gi|297564269|ref|YP_003683242.1| AMP-dependent synthetase and ligase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296848718|gb|ADH70736.1| AMP-dependent synthetase and ligase [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
Length = 523
Score = 301 bits (770), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 170/380 (44%), Positives = 230/380 (60%), Gaps = 8/380 (2%)
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
V + +PE E D + +NYTSGTT+ PKGV+ HR ++ +V +L+ RI +
Sbjct: 146 VAQSTADYTRPEIDETDLLTINYTSGTTARPKGVMITHRNAYMNSVGTLLHLRIGIDDRY 205
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSS 182
LWTLPMFH NGW+Y+W + A ++CL +D +Y +I+ GVT +C A VL MLS+
Sbjct: 206 LWTLPMFHANGWTYTWTVTAAAAAHVCLPAMDPATVYELIRSEGVTWLCAAPTVLIMLSN 265
Query: 183 SPSTKPLDRP--VKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCAWKSQW 239
+P + P V ++T+GASP A + R E G+ V+H YGLTET F+ C +++
Sbjct: 266 APEEVRGEVPSGVHVVTAGASPAADTIERLEDGFGWTVTHVYGLTETTPFITVCEPRAEH 325
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKD 299
L+ +RA +KARQGV I ++ VV + G+ V DG + GEI R +M GY D
Sbjct: 326 GGLSPRDRAAVKARQGVELITSGELRVVDAD-GVEVPWDGTTVGEITVRGNVVMKGYYND 384
Query: 300 QEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAI 359
E + M D WF+TGD V H DGY+EI+DR KDVIISGGENISS EVE VL +PA+
Sbjct: 385 PEATRKAMGDG-WFHTGDAAVTHPDGYVEIQDRIKDVIISGGENISSVEVEGVLLRHPAV 443
Query: 360 NEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELP 419
E A+V + WG+ P A V L+ TEE +I F R L H+ A V ++LP
Sbjct: 444 LEAAVVGVPHERWGESPKASVVLR--EGAAATEEELIAFARDNLAHFKAPTQVEFVEQLP 501
Query: 420 KTATGKIQKFVLREIVNAVN 439
KTATGKIQKFVLR +AV+
Sbjct: 502 KTATGKIQKFVLRGGASAVS 521
>gi|389817164|ref|ZP_10207946.1| AMP-binding protein [Planococcus antarcticus DSM 14505]
gi|388464740|gb|EIM07068.1| AMP-binding protein [Planococcus antarcticus DSM 14505]
Length = 470
Score = 300 bits (769), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 171/441 (38%), Positives = 251/441 (56%), Gaps = 18/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL K + +++HS +K L VD + L + ++ K +++ D + V
Sbjct: 28 RLTAKDLEYIINHSGAKTLIVDAEFGKL----IEEIQDKLLIEKYIMVEMDGHDSKLNGV 83
Query: 65 GHPNF-----KWVQPESEWDP---MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ +F K+V PE D + LNYTSGTTS+PKGV+ HR ++ + L ++
Sbjct: 84 SYEDFIQQDSKFVLPEVRIDENQMLTLNYTSGTTSNPKGVMLTHRSNYLNAANFLYHLKV 143
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+ V+L TLPMFH NGW W + A GGT++CLRKVD +I + + H ++ +CGA V
Sbjct: 144 VHDDVYLHTLPMFHANGWGGVWAITAAGGTHVCLRKVDPSLILDLFETHKISILCGAPTV 203
Query: 177 LNMLSSSPSTKPL---DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
+NML + P K + P A + E LG + H YGLTET+ F++
Sbjct: 204 VNMLVNEPKAKTIHITTNPRMGTAGAPPAAALIGKAQELLGLNMMHVYGLTETSPFILYN 263
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
WK +++ E+A +KARQG+ + VV+ E G V +GQ GEI+ R +M
Sbjct: 264 EWKKEFDDKTPDEQATIKARQGIELAFNGETKVVNQEDGKEVAWNGQELGEIITRGNVVM 323
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY KD E ++ ++D WFYTGD+ V + DGY+EI+DR KD+IISGGENISS E+E +L
Sbjct: 324 SGYYKDPEKTAEAIKDG-WFYTGDLAVTYPDGYIEIQDRIKDMIISGGENISSTEIEGIL 382
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +P + EVA++A D+ WG+ P A + L + TE II + + H+ A KS+
Sbjct: 383 YKHPDVMEVAVIAVPDEKWGEVPKAIIVL--QPGATVTELEIISYTCDNMAHFKAPKSIE 440
Query: 414 IEDELPKTATGKIQKFVLREI 434
+ LPKTATGK+QKF LRE+
Sbjct: 441 FVEALPKTATGKLQKFRLREM 461
>gi|385675727|ref|ZP_10049655.1| o-succinylbenzoate--CoA ligase [Amycolatopsis sp. ATCC 39116]
Length = 537
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/361 (42%), Positives = 219/361 (60%), Gaps = 8/361 (2%)
Query: 75 ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGW 134
+ E P+++NYTSGTT PKGVV+ HRG ++ + + V+LWTLPMFH NGW
Sbjct: 171 DDERSPISINYTSGTTGRPKGVVYTHRGAYLNSFGEIFHSGHDADSVYLWTLPMFHCNGW 230
Query: 135 SYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVK 194
+W + A GGT ICLR+V ++ +I H VTH+ GA V+ + + LD +
Sbjct: 231 CTTWALVAAGGTQICLREVRGDRVWELIDRHRVTHLNGAPTVVTTIMRAEPAHQLDHRLV 290
Query: 195 ILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQ 254
+ T+GA P +L+ E +GF + H YGLTET G ++ W+ LA ERA+L+ARQ
Sbjct: 291 VTTAGAPPSPTTILQMERMGFRIVHVYGLTETYGPYAVNEYQRAWDDLAPEERAKLRARQ 350
Query: 255 GVRTIGLADMDVVHPETG--MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDW 312
GV G+ D V G V DG++ GEIV R ++M GY D EG+ W
Sbjct: 351 GV---GMLQADEVRVVDGNLRDVPRDGRTMGEIVMRGNNVMQGYFNDPEGTERAF-AGGW 406
Query: 313 FYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFW 372
F++GD+GV+H DGY+E++DR+KDVIISGGENIS+ EVE + +P + EVA++ D W
Sbjct: 407 FHSGDLGVMHPDGYVELRDRAKDVIISGGENISTIEVEHAIAAHPDVLEVAVIGVPDPRW 466
Query: 373 GKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
G+RP AFV + + P+E +I R+ + Y A + V I ELPKT+TGK++K+ LR
Sbjct: 467 GERPKAFVVPR--PGRNPSESELIAHVRSLIARYKAPREVEIVAELPKTSTGKVRKYELR 524
Query: 433 E 433
E
Sbjct: 525 E 525
>gi|424855523|ref|ZP_18279824.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356663275|gb|EHI43401.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 543
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 151/363 (41%), Positives = 219/363 (60%), Gaps = 7/363 (1%)
Query: 75 ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGW 134
+ E P+++NYTSGTT PKGVV+ HRG ++ + + V+LWTLPMFH NGW
Sbjct: 172 DDERSPISINYTSGTTGRPKGVVYTHRGAYLNSFGEIFHSAHNAASVYLWTLPMFHCNGW 231
Query: 135 SYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVK 194
+W + A GGT +CLR+V ++ +I H VTH+ GA V+ + ++P LD +
Sbjct: 232 CTTWALVAAGGTQVCLREVRGDRVWELIDRHRVTHLNGAPTVVTTILNAPEAHTLDESLV 291
Query: 195 ILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQ 254
+ +GA P L ES+GF + H YGLTET G +C W+ W L ERAR+++RQ
Sbjct: 292 VTVAGAPPSPTTLSEAESMGFTIVHVYGLTETYGPYTACVWQDGWRDLRADERARMQSRQ 351
Query: 255 GVRTIGLADMDVVHPE----TGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDN 310
GV + + VV E + V DG + GEIV R ++M Y +D E + +
Sbjct: 352 GVAMVQADPVRVVEAELLDGQLVDVPADGLTMGEIVMRGNNVMREYYRDPEATDAALA-G 410
Query: 311 DWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDK 370
WF++GD+GV+H DGY+E+ DR+KDVI+SGGENIS+ EVE + +P + EVA++ D
Sbjct: 411 GWFHSGDLGVMHPDGYVELLDRAKDVIVSGGENISTVEVEHAVASHPDVLEVAVIGVPDA 470
Query: 371 FWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFV 430
WG+RP AFV + + + ++E R+R+ Y A ++V + ELPKT+TGK+QKF
Sbjct: 471 KWGERPKAFVVARHGRNLDAAD--VLEHVRSRIARYKAPRAVEVVPELPKTSTGKVQKFE 528
Query: 431 LRE 433
LRE
Sbjct: 529 LRE 531
>gi|116626397|ref|YP_828553.1| AMP-dependent synthetase/ligase [Candidatus Solibacter usitatus
Ellin6076]
gi|116229559|gb|ABJ88268.1| AMP-dependent synthetase and ligase [Candidatus Solibacter usitatus
Ellin6076]
Length = 507
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/436 (40%), Positives = 261/436 (59%), Gaps = 21/436 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL ++ +L+H +K+L VD Q +PL A P +I D + S+
Sbjct: 88 RLAAGELAWILNHCGAKVLLVDPQLAPLVADAAV----------PHIIQDYEAFLSA--- 134
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
P++ V E +A+NYTSGTT PKGV++ HRG ++ + + + + + V+LW
Sbjct: 135 APPHYTPVPVTDENACIAINYTSGTTGFPKGVMYTHRGAWVNALGEITEHGLTQRSVYLW 194
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSS-- 182
TLPMFH NGW + W + A GG +IC+R+ D + ++I+ GVTH+CGA VV++ L+
Sbjct: 195 TLPMFHCNGWCFPWAVTAAGGRHICIRQPDPCEMVALIQAQGVTHLCGAPVVVSSLAQYC 254
Query: 183 SPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTL 242
+ + +RP++I+T+GA PP AV+ E G + H+YGLTET G C+W +W+
Sbjct: 255 AANQVKFERPLRIVTAGAPPPPAVIRAAEETGAEICHAYGLTETYGPHTICSWNPEWDER 314
Query: 243 ADTERARLKARQGVR-TIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQE 301
ERA LKARQGV T+ D+ VV + V DG++ GE++ R ++MLGY + +
Sbjct: 315 PAPERALLKARQGVAYTVAGTDLRVVDFQM-HDVPPDGETMGEVLMRGNNVMLGYYANPK 373
Query: 302 GSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
+ + WF++GD+ VVH DGY+E++DR KD++ISGGENISS EVE L +PA+ E
Sbjct: 374 ATEDAFQ-GGWFHSGDLAVVHPDGYIELRDRMKDIVISGGENISSIEVEKTLADHPAVAE 432
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKT 421
VA+VA D+ WG+ P A+V LK S T E +I +CR R+ H+ A K V LP+T
Sbjct: 433 VAIVAVPDEKWGEVPKAYVGLKPGCSA--TAEELIAWCRDRMAHFKAPKLVEF-GPLPRT 489
Query: 422 ATGKIQKFVLREIVNA 437
ATGKI+K LR A
Sbjct: 490 ATGKIRKNQLRAQAKA 505
>gi|54023241|ref|YP_117483.1| acyl-CoA synthetase [Nocardia farcinica IFM 10152]
gi|54014749|dbj|BAD56119.1| putative acyl-CoA synthetase [Nocardia farcinica IFM 10152]
Length = 515
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/432 (40%), Positives = 240/432 (55%), Gaps = 18/432 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL ++ +L HS +++L + LAL A++L P + ++ + A+ +P
Sbjct: 91 RLSATEIAFILDHSGARVLIATDPLTSLALEAVALTPGPMTVIAGAEEYEAIVASGAPVD 150
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
+ E P+A+NYTSGTT PKGVV+ HRG ++ +V+ + V+LW
Sbjct: 151 -------ISSHDELAPIAINYTSGTTGKPKGVVYTHRGAYLQSVAMAFHSGMDLNSVYLW 203
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSP 184
TLPMFH NGW ++W + A G T++CL KV+ I++ I GVTH+C A V++ ++S
Sbjct: 204 TLPMFHCNGWCFTWAVTAAGATHVCLPKVEADAIWAAIGDAGVTHLCAAPTVISTITSDA 263
Query: 185 STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLAD 244
T R V + T GA P A+L R G V+H YG+TET G V W W+ +
Sbjct: 264 PTTTSPRRVWVATGGAPPAPALLARARRCGLDVTHLYGMTETYGPAVINEWDRAWDAAPE 323
Query: 245 TERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
ER RL ARQGV I + VV E G V D + GEIV R ++ Y +D ++
Sbjct: 324 AERDRLNARQGVGNIITGGVRVVD-EAGGDVPADATTIGEIVLRGNNVTAEYYRDPAATA 382
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
+ D WF TGD+ V HSDGY+EI+DR+KD+IISGGENISS E+E + +PA+ E A+
Sbjct: 383 AAVSDG-WFRTGDLAVRHSDGYIEIRDRAKDLIISGGENISSIEIERAILEHPAVLEAAV 441
Query: 365 VAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDE---LPKT 421
V + WG+RP AFVSL +P E RA L +A V E LPKT
Sbjct: 442 VRVPHEHWGERPAAFVSL------RPGAELSSGELRAHLLDRLAKFKVPDRIEFATLPKT 495
Query: 422 ATGKIQKFVLRE 433
ATGKIQKF L +
Sbjct: 496 ATGKIQKFQLEQ 507
>gi|15223009|ref|NP_177756.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
gi|75313415|sp|Q9SFW5.1|AEE21_ARATH RecName: Full=Probable acyl-activating enzyme 21
gi|6554489|gb|AAF16671.1|AC012394_20 putative AMP-binding protein; 80053-82018 [Arabidopsis thaliana]
gi|332197700|gb|AEE35821.1| AMP-dependent synthetase and ligase family protein [Arabidopsis
thaliana]
Length = 546
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/447 (38%), Positives = 266/447 (59%), Gaps = 29/447 (6%)
Query: 6 LDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT-- 63
D + +++ L ++ K+ FVD + +A +LSL + I KP++I + T +PT
Sbjct: 98 FDSQMLAMALEKTKPKVFFVDSEFLSVAEESLSLL--SNIEEKPLII----TITENPTEQ 151
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G+PNFK ++P E DP+ALN+TSGTTS+PK VV+ HRG ++ + +
Sbjct: 152 SKYEQYEDFLSTGNPNFKPIRPVDECDPIALNFTSGTTSTPKCVVYSHRGAYLNATAVGV 211
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+L T+PM+H +GW Y W + A GG +CLR+V+ +I+ I H VT+ G
Sbjct: 212 MNEMKPMPVYLCTVPMYHCSGWCYIWTVTAFGGVIVCLREVNDEVIFDSIVKHKVTNFGG 271
Query: 173 ALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
+ VLNM++++ + P V++++ G+SPP V+L+ + LGF V +YG +E G
Sbjct: 272 SPPVLNMIANARDSVKKSFPWTVQVMSGGSSPP-EVMLKLKKLGFKVMMAYGCSEVYGLG 330
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+C W +W TL + E RLKAR G+ +DV+ P T SV HDG++ I R
Sbjct: 331 TACLWMPEWETLPEEESLRLKARDGLNHFAKEAVDVLDPTTMKSVPHDGKTIRVIALRGN 390
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GY KD+E + R W+++ D+GV+ DGY++ KDRS+DVI GGE + S E+E
Sbjct: 391 TVMSGYFKDKEATEAAFR-GGWYWSRDMGVIDPDGYIQFKDRSQDVITCGGEIVGSKEIE 449
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPH---YM 407
+LY +PA+ + +V + D+ G+ CAFV LK + EE IIEFC+ +L + M
Sbjct: 450 GILYSHPAVYDAGVVGRPDETLGESMCAFVKLKE--GAEAREEEIIEFCKRKLGNKNMKM 507
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREI 434
K+V+ D +PKT TGKI+K VLR++
Sbjct: 508 IPKTVVFSD-VPKTPTGKIRKNVLRKM 533
>gi|397729293|ref|ZP_10496080.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396934900|gb|EJJ02023.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 534
Score = 298 bits (763), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 244/443 (55%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS--------NTILPKPVL----- 51
RL + + +L HS + LLFVD + A PS ++ + +PV+
Sbjct: 96 RLAGRELEYILEHSGTSLLFVDSELVGSVATAREAVPSLREVIEIPDSTIARPVVPEGIV 155
Query: 52 --IHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
++ D A + G P W + E +A+NYTSGTT PKGV++ HRG ++ ++
Sbjct: 156 TGMYADFLAAADDVDGTP-LHW-GVDDEQQVIAINYTSGTTGKPKGVMYTHRGAYLNSLG 213
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+LWTLPMFH NGW W + GT+ICLR V I+ I GVTH
Sbjct: 214 ETFHNGFTGSTKYLWTLPMFHCNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTH 273
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+CGA V + ++ +P P+D ++I T+GA P V+ + E++G V H YGLTE G
Sbjct: 274 LCGAPAVCSTIAEAPQAHPVD-ALRITTAGAPPSPTVIAQLEAIGVTVVHVYGLTEAYGP 332
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C ++ W+ ERA L +RQGV + + VV V DG++ GEIV R
Sbjct: 333 YTICEYQDSWSDRTAEERASLLSRQGVGMVQAENARVVDAHMN-DVPADGETMGEIVLRG 391
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++MLGY +D E ++ WF+TGD+GV+H+DGY+++KDR+KD++ISGGENIS+ EV
Sbjct: 392 NNVMLGYYRDPEATAEAFA-GGWFHTGDLGVMHADGYIQLKDRAKDIVISGGENISTVEV 450
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E + +PA+ +VA+V WG+RP AFV +K T E ++E R R+ +
Sbjct: 451 EQAMMTHPAVLDVAVVGVPHPKWGERPKAFVIVK--KGATVTAEELVEHTRGRIAKFKVP 508
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
++ ELP+T TGK+ KF LR
Sbjct: 509 DEIVFPLELPRTPTGKVLKFELR 531
>gi|377568750|ref|ZP_09797927.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
gi|377534127|dbj|GAB43092.1| putative fatty-acid--CoA ligase [Gordonia terrae NBRC 100016]
Length = 536
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 157/352 (44%), Positives = 218/352 (61%), Gaps = 5/352 (1%)
Query: 81 MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGM 140
+A+NYTSGTT PKGV++ HRG ++ +V+ + +LWTLPMFH +GW ++W +
Sbjct: 184 LAINYTSGTTGRPKGVMYHHRGAYLQSVAMAYHSGLGPGSKYLWTLPMFHCDGWCFTWAV 243
Query: 141 AAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGA 200
A GGT++CLR +D I+ + GVTH A VL M++ P+ L V+ T GA
Sbjct: 244 IAAGGTSVCLRGIDTAQIWHHLVADGVTHFSAAPTVLTMIAEDPAATRLSTTVQAGTGGA 303
Query: 201 SPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIG 260
P A+L R LG V+H YG+TET G +V W+ +W+ D ERA KARQG+ I
Sbjct: 304 PPSPALLARMARLGIEVTHLYGMTETFGPIVVNEWQPEWDDATDAERAERKARQGIGNIA 363
Query: 261 LADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGV 320
+ VV + G+ V D + GE+V R ++MLGY +D + ++ D W TGD+ V
Sbjct: 364 AGRVRVVTAD-GVDVPPDSATIGELVVRGNNVMLGYYRDPDATAAATLDG-WLRTGDLAV 421
Query: 321 VHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFV 380
+H DGY+EI+DRSKDVIISGGENI+S EVE VL +P + E A+V + D+ WG+ P A+V
Sbjct: 422 MHPDGYVEIRDRSKDVIISGGENIASVEVERVLDSHPDVVESAVVGRPDERWGEVPIAYV 481
Query: 381 SLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
S++ S T E ++EF R L + K V+ ELPKT+TGKIQK VLR
Sbjct: 482 SVRAGASL--TAEGLVEFARKTLARFKVPKEVVFA-ELPKTSTGKIQKNVLR 530
>gi|111017211|ref|YP_700183.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus jostii RHA1]
gi|110816741|gb|ABG92025.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus jostii RHA1]
Length = 534
Score = 298 bits (762), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/443 (37%), Positives = 245/443 (55%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS--------NTILPKPVL----- 51
RL + + +L HS + LLFVD + A PS ++ + +P++
Sbjct: 96 RLAGRELEYILEHSGTSLLFVDSELVGSVATAREAVPSLREVIEIPDSTIARPMVPEGIV 155
Query: 52 --IHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
++ D A + G P W + E +A+NYTSGTT PKGV++ HRG ++ ++
Sbjct: 156 TGMYADFLAAADDVDGTP-LHW-GVDDEQQVIAINYTSGTTGKPKGVMYTHRGAYLNSLG 213
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+LWTLPMFH NGW W + GT+ICLR V I+ I GVTH
Sbjct: 214 ETFHNGFAGSTKYLWTLPMFHCNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTH 273
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+CGA V + ++ +P P+D ++I T+GA P V+ + E++G V H YGLTE G
Sbjct: 274 LCGAPAVCSTIAEAPQAHPVD-ALRITTAGAPPSPTVIAQLEAIGVTVVHVYGLTEVYGP 332
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C ++ W+ ERA L +RQGV + + VV + V DG++ GEIV R
Sbjct: 333 YTICEYQDSWSDRTAEERASLLSRQGVGMVQAENARVVDAQMN-DVPADGETMGEIVLRG 391
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++MLGY +D E ++ WF+TGD+GV+H+DGY+++KDR+KD++ISGGENIS+ EV
Sbjct: 392 NNVMLGYYRDPEATAEAFA-GGWFHTGDLGVMHADGYIQLKDRAKDIVISGGENISTVEV 450
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E + +PA+ +VA+V WG+RP AFV +K T E ++E R R+ +
Sbjct: 451 EQAMMTHPAVLDVAVVGVPHPKWGERPKAFVIVK--KGATVTAEELVEHTRGRIAKFKVP 508
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
++ ELP+T TGK+ KF LR
Sbjct: 509 DEIVFPLELPRTPTGKVLKFELR 531
>gi|397738012|ref|ZP_10504647.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
gi|396926079|gb|EJI93353.1| AMP-binding enzyme family protein [Rhodococcus sp. JVH1]
Length = 531
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 170/443 (38%), Positives = 243/443 (54%), Gaps = 29/443 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ--------------SSPLALAALSLFPSNTILPKPV 50
RL ++ +L H ++K+L V S+ + + A + + + + +
Sbjct: 92 RLASAEIAYILAHCDAKILVVHESLLDSIRPIAGELRLSTVVVIGAGDIAGVDALEYRKI 151
Query: 51 LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
L H+ H W E +++NYTSGTT PKGV++ HRG ++ +
Sbjct: 152 LDHN----------AHEPIDWTV-RDELATISINYTSGTTGRPKGVMYTHRGAYLNAMGE 200
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
LI R + V+LWTLPMFH NGW W + A+GGT+ICL +D I+++ + GV+H
Sbjct: 201 LIHSRHTSDSVYLWTLPMFHCNGWCTPWAITAIGGTHICLEAIDSEKIWALFRTEGVSHF 260
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
A VL ML +SPS L + V + T+GA P ++ + +LGF + H YGLTET G
Sbjct: 261 NAAPTVLVMLVNSPSAAALPQAVTVTTAGAPPSPTIIEQARALGFEIIHVYGLTETYGPY 320
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C +S W L TE+ARL ARQGV I + VV + V DG + GEIV R
Sbjct: 321 SVCETQSDWAELPATEQARLAARQGVGMIHTDGVRVVD-KNMTDVPADGSTIGEIVMRGN 379
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GYL D + + WF++GD+GV+H DGY+E++DRSKD++ISGGENISS EVE
Sbjct: 380 GVMKGYLNDPAATEKAF-EGGWFHSGDLGVMHPDGYVELRDRSKDIVISGGENISSVEVE 438
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VL +PA+ E A++ + WG+RP AFV K P E + R+ +
Sbjct: 439 QVLVSHPAVLEAAVIGVPSEKWGERPKAFVVTKPNAQVTPDE--LRSHAATRMAKFKVPD 496
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
+ + D LPKT+TGKIQKF LR+
Sbjct: 497 VIDVIDALPKTSTGKIQKFQLRD 519
>gi|307150105|ref|YP_003885489.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
gi|306980333|gb|ADN12214.1| AMP-dependent synthetase and ligase [Cyanothece sp. PCC 7822]
Length = 538
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 160/442 (36%), Positives = 260/442 (58%), Gaps = 25/442 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + + +L+HS +K LFVD + + S + +IH +P
Sbjct: 96 RLSPQEILYILNHSGAKFLFVDTEWTNNIKQIQSQLETVE-----KIIHISDQENLAPLE 150
Query: 65 GHPNFKWVQPES----------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G ++ + E + +++NYTSGTT PKGV++ HRG ++ ++ +++
Sbjct: 151 GEEYQGFLDKANSKSVPWLISDEMETISINYTSGTTGKPKGVMYSHRGAYLNSLGEILET 210
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA- 173
R+ + V+LWTLPMFH NGW + W + A+G T++CLRK + +I+ +I V+H+C A
Sbjct: 211 RLTPESVYLWTLPMFHCNGWCFPWAVTAIGATHLCLRKFNAALIWQLIHEQKVSHLCAAP 270
Query: 174 LVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
+V++++L+ + + L+ P++I T+GA P ++ + ++G ++H YGLTE G C
Sbjct: 271 IVLISLLNDANCPQKLEVPLRITTAGAPPSPTLIEKITAIGAKITHVYGLTEVYGPYSVC 330
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
+ QW L ERA+ ARQGV IG + VV E V DG++ GE++ R +M
Sbjct: 331 EEQPQWQELNLPERAKRLARQGVPYIGAEGLRVVD-EQMQDVPADGETIGEVIMRGNMVM 389
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY D + + WF++GDIGV++ DGY+E++DR KD+II+GGE +SS EVE L
Sbjct: 390 KGYYNDPQATENAF-SGGWFHSGDIGVMYPDGYMELRDRIKDIIITGGETVSSIEVEQCL 448
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV- 412
Y + + E A++ + WG+ P AFV+LK + + TE+ +IEFCR+++ HY ++
Sbjct: 449 YAHEGVLECAVIGVPHEKWGETPKAFVTLKEDFTV--TEQDLIEFCRSKIAHYKCPTAIE 506
Query: 413 -IIEDELPKTATGKIQKFVLRE 433
I+ LPKT+TGKIQK++LR+
Sbjct: 507 FIV---LPKTSTGKIQKYLLRQ 525
>gi|308179143|ref|YP_003918549.1| fatty acid--Co-A ligase [Arthrobacter arilaitensis Re117]
gi|307746606|emb|CBT77578.1| putative fatty acid--Co-A ligase [Arthrobacter arilaitensis Re117]
Length = 535
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 164/440 (37%), Positives = 248/440 (56%), Gaps = 19/440 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + ++ HSE+KL+ D + L A +L N L + I DD + P V
Sbjct: 93 RLSAHELQYIVDHSEAKLMLADTE---LLENAETLRRENPTLDALIEITDDQYDGARPNV 149
Query: 65 G-HPNFKWVQPES-----------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ E+ E P+ LNYTSGTT PKGV++ HRG ++ ++
Sbjct: 150 QVDATLDELLAEASDEKLPYAIADERAPITLNYTSGTTGKPKGVLYSHRGSYLNSLGEAH 209
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
Q +LWTLPMFH NGW W + A GGT++ LR V ++ I++ G TH+CG
Sbjct: 210 HQGFTAQTRYLWTLPMFHCNGWCTPWAVTAAGGTHLSLRGVREDAVWDAIENLGTTHLCG 269
Query: 173 ALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
A V ++++ S LD P++I T+GA P A++ + + LG V H YGLTE G
Sbjct: 270 APTVCSIIADSTRAHQLDSPLRITTAGAPPSPAIISKLQKLGIEVVHVYGLTEVYGPYTV 329
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C ++ +W+ L RA ARQGV I +V E +V DGQ+ GEIV R ++
Sbjct: 330 CEYQDEWDELDGPGRAAKLARQGVGMITAESARIVD-ENMNNVPADGQTMGEIVLRGNNV 388
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M+GY +D+ ++ WF+TGD+GV+H DGY++++DR+KD+IISGGENIS+ EVE
Sbjct: 389 MIGYYRDEAATAQAFH-GGWFHTGDLGVMHPDGYIQVRDRAKDIIISGGENISTIEVEQA 447
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L +P + ++A++ D+ WG+RP A+V ++ S E +I F R +L + +++
Sbjct: 448 LASHPEVLDLAVIGVADEKWGERPVAYV-IRASGSTLDA-ETLIGFAREKLAGFKVPRTI 505
Query: 413 IIEDELPKTATGKIQKFVLR 432
+ +LP+T+TGK+QK VLR
Sbjct: 506 VFPQDLPRTSTGKVQKNVLR 525
>gi|111026466|ref|YP_708749.1| long-chain-fatty-acid--CoA ligase [Rhodococcus jostii RHA1]
gi|110825309|gb|ABH00591.1| probable long-chain-fatty-acid--CoA ligase [Rhodococcus jostii
RHA1]
Length = 542
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 177/449 (39%), Positives = 252/449 (56%), Gaps = 28/449 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ-SSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT 63
RL + + ++ HS+S L +D SS + A TI V + DD ++ ++
Sbjct: 91 RLSGEEIRYIVDHSQSTFLVIDTALSSSIVDVAEKFETVETI----VTVTDDAASGTAAL 146
Query: 64 ---------------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
V P +W + E +++NYTSGTT PKGV++ HRG ++ +
Sbjct: 147 AECRDFSDLLAMVHGVNLPAIEWAV-DDERSLLSINYTSGTTGKPKGVMYSHRGAYLNAI 205
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
LI + V+LWTLPMFH NGWS W +AA GGT +CLR+V +I+++I HGVT
Sbjct: 206 GELIHSKHDVDSVYLWTLPMFHCNGWSTGWAVAAAGGTQVCLREVRSELIWNLIDRHGVT 265
Query: 169 HICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
H+ GA V+ + +S LDRP+ + T+GA P + R +GF V H YGLTET G
Sbjct: 266 HLNGAPTVIITIMNSGRAHKLDRPIIVTTAGAPPSPTTIERMADIGFEVVHVYGLTETYG 325
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKHDGQSQGE 284
C +S W +L RAR ARQGV I M VV E+ + V DG + GE
Sbjct: 326 PYSICEPQSSWKSLDAATRARRMARQGVGMIQADRMRVVSTESPEGLLVDVPADGVTIGE 385
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
IV R ++M GY ++ E + WF++GD+GV+H DGY+E++DR+KD+IISGGENI
Sbjct: 386 IVMRGNNVMSGYYRNPEATRSAF-GGGWFHSGDLGVMHPDGYVELRDRAKDIIISGGENI 444
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
S+ EVE L +PA+ E A+V D WG+RP AFV + T ++E + R+
Sbjct: 445 STVEVEQALMTHPAVIEAAVVGVPDPQWGERPKAFVVVIE--PGDVTAADLLEHVQTRIA 502
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y A + +++ LPKT+TGKI+KF LRE
Sbjct: 503 RYKAPREIVVVPNLPKTSTGKIRKFELRE 531
>gi|296083814|emb|CBI24031.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 169/201 (84%)
Query: 238 QWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYL 297
+WN L TERARLK+RQGVRT+G+ ++DV+ P +G+SVK DG S GEIV R G IMLGYL
Sbjct: 280 KWNRLPATERARLKSRQGVRTVGMTEVDVLDPGSGLSVKRDGSSLGEIVLRGGCIMLGYL 339
Query: 298 KDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
KD +G+S + D+ WF+TGD+GV+HSDGYLEIKDRSKDVIISGGEN+SS EVESVLY +P
Sbjct: 340 KDPKGTSKSLTDDGWFFTGDVGVMHSDGYLEIKDRSKDVIISGGENLSSVEVESVLYTHP 399
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDE 417
A+NE A+VA+ D FWG+ PCAFVSLK E +++PTE+ I+E+CRAR+PHYM K+V+ E+E
Sbjct: 400 AVNEAAVVARPDDFWGETPCAFVSLKPERTEQPTEKEIMEYCRARMPHYMVPKTVVFEEE 459
Query: 418 LPKTATGKIQKFVLREIVNAV 438
LPKT+TGKIQKFVLRE A+
Sbjct: 460 LPKTSTGKIQKFVLRETAKAM 480
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/171 (61%), Positives = 121/171 (70%), Gaps = 28/171 (16%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD K VSVLL HSESKL+FVDYQS PL L +LSLFP ++ +P+L
Sbjct: 136 RLDAKTVSVLLRHSESKLIFVDYQSRPLILESLSLFPPSS--QRPLL------------- 180
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
W+PM LNYTSGTTSSPKGVVHCHRG+FI+TV SLIDW +P QPV+LW
Sbjct: 181 -------------WNPMILNYTSGTTSSPKGVVHCHRGIFIVTVDSLIDWCVPKQPVYLW 227
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
TLPMFH NGWS+ WGMAAVGGTN+CLRK D +IY I+ H VTH+CGA V
Sbjct: 228 TLPMFHANGWSFPWGMAAVGGTNVCLRKFDASVIYEAIRVHRVTHMCGAPV 278
>gi|403723397|ref|ZP_10945608.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
gi|403206058|dbj|GAB89939.1| putative fatty-acid--CoA ligase [Gordonia rhizosphera NBRC 16068]
Length = 545
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 171/454 (37%), Positives = 246/454 (54%), Gaps = 29/454 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD--------V 56
RL + +L HSE+ LF D + P L V I DD V
Sbjct: 99 RLAGPELVYILEHSEATTLFFDSEFRHTVATIADQLPD---LETFVEITDDEFGHPLGDV 155
Query: 57 SATS-SPTVGHPNF------------KWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGL 103
+A+ V +P++ WV + E +ALNYTSGTT PKGV++ HRG
Sbjct: 156 AASGIGGLVSYPDYLSRADDLDPTPLPWVV-DDEDRVIALNYTSGTTGKPKGVMYTHRGA 214
Query: 104 FIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
++ + + +LWTLPMFH NGW W + GGT++CLR V ++ I
Sbjct: 215 YLNSFGETFHNQFTGSSRYLWTLPMFHCNGWCTPWAVTHAGGTHVCLRAVRAEAVWDGID 274
Query: 164 HHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
GVTH+CGA V ++ SP LDRP++I T+GA P V+ + E+LG V H YGL
Sbjct: 275 DLGVTHMCGAPTVCTTIAGSPRAHRLDRPLRITTAGAPPSPTVIGQLEALGVTVVHVYGL 334
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TE G C ++ W+ L ERA +RQGV + VV E + V DG++ G
Sbjct: 335 TEVYGPYTICEYQEAWDDLTPPERAAKLSRQGVGMVQAERARVVD-ENMVDVPADGETMG 393
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R ++M GY KD + ++ WF++GD+GV+H DGY+++KDR+KD+IISGGEN
Sbjct: 394 EIVLRGNNVMAGYYKDPDATAEAFA-GGWFHSGDLGVMHPDGYIQLKDRAKDIIISGGEN 452
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL 403
IS+ EVE L + ++ +VA+V D+ WG+RP A+V LK + T + +I + R L
Sbjct: 453 ISTVEVEQALVSHDSVLDVAVVGVPDEKWGERPRAYVLLK--PGETLTADELIAYARKLL 510
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
Y + ++ ++LP+T TGK+ KF LR+ A
Sbjct: 511 AGYKVPRDIVFAEDLPRTPTGKVLKFELRQKAAA 544
>gi|453382763|dbj|GAC82842.1| putative fatty-acid--CoA ligase [Gordonia paraffinivorans NBRC
108238]
Length = 559
Score = 294 bits (752), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 214/359 (59%), Gaps = 5/359 (1%)
Query: 81 MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGM 140
+A+NYTSGTT PKGV++ HRG ++ + + Q +LWTLPMFH NGW W +
Sbjct: 203 IAINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGQTKYLWTLPMFHCNGWCTPWAV 262
Query: 141 AAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGA 200
GGT+ICLR V I+ I + GVTH+CGA V + SP LDRP++I T+GA
Sbjct: 263 THAGGTHICLRAVRAEAIWDAIDNLGVTHMCGAPTVCTTIVGSPRAHRLDRPLRITTAGA 322
Query: 201 SPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIG 260
P V+ E++G V H YGLTE G C ++ W+ LA ERA +RQGV +
Sbjct: 323 PPSPTVIGSLEAIGVTVVHVYGLTEVYGPYTICEYQDSWSDLAPDERAAKLSRQGVGMVQ 382
Query: 261 LADMDVVHPET--GMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDI 318
+ VV P++ + V DG++ GEIV R ++M GY +D+E + WF+TGD+
Sbjct: 383 AENARVVVPDSLPLVDVPADGETMGEIVLRGNNVMAGYFRDEEETRKAFA-GGWFHTGDL 441
Query: 319 GVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCA 378
GV+H DGY++++DR+KD+IISGGENIS+ EVE L + A+ +VA++ D+ WG+RP A
Sbjct: 442 GVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDAVLDVAVIGVADEKWGERPRA 501
Query: 379 FVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
+V L T E +IE R L Y + ++ +LP+T TGK+ K LRE A
Sbjct: 502 YVLLN--PGATLTAEELIEHGRRLLAGYKVPRDIVFAGDLPRTPTGKVLKGELRERARA 558
>gi|453078818|ref|ZP_21981544.1| fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
gi|452755971|gb|EME14389.1| fatty-acid--CoA ligase [Rhodococcus triatomae BKS 15-14]
Length = 541
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 169/444 (38%), Positives = 242/444 (54%), Gaps = 25/444 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L HS + +LFVD + A P+ + + V I D + P V
Sbjct: 98 RLAGPELEYILEHSGASVLFVDSEFLGSAATIRGAVPT---VREIVEIPDSTITVAEPVV 154
Query: 65 G-----HPNFKWVQPES---------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G +P+ ++ E P+A+NYTSGTT PKGV++ HRG ++ ++
Sbjct: 155 GVATITYPDLLATAVDAAPLPWTVADEQTPIAINYTSGTTGKPKGVMYSHRGAYLNSLGE 214
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+LWTLPMFH NGW W + A GGT++CLR V I+ I G+T++
Sbjct: 215 TFHNGFTGDTKYLWTLPMFHCNGWCTPWAVTAAGGTHVCLRAVRAEPIWEAIDTLGITNL 274
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA V + ++ + L P++I T+GA P ++ + E+LG V H YGLTE G
Sbjct: 275 CGAPTVCSTIADAAEAHALTTPLRITTAGAPPSPTIIGKLEALGVTVVHVYGLTEVYGPY 334
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C + W L ERA L +RQGV + VV P+ V DG S GEIV R
Sbjct: 335 TICEPQESWAELDPAERAVLISRQGVGMLQAETARVVDPQMN-DVPADGVSLGEIVLRGN 393
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++MLGY +D+E ++ WF+TGD+GV+H DGY+++KDR+KD+IISGGENIS+ EVE
Sbjct: 394 NVMLGYYRDEEATAQAFA-GGWFHTGDLGVMHPDGYIQLKDRAKDIIISGGENISTVEVE 452
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK--WELSKKPTEEAIIEFCRARLPHYMA 408
+ +PA+ +VA++ D WG+RP AFV L+ ELS E +I R L Y
Sbjct: 453 QAIVSHPAVADVAVIGVPDDRWGERPKAFVLLRPGAELSA----EELITHTRRLLAGYKV 508
Query: 409 HKSVIIEDELPKTATGKIQKFVLR 432
+ + +LP+T TGKI+K LR
Sbjct: 509 PRDIAFASDLPRTPTGKIRKNELR 532
>gi|15221339|ref|NP_176994.1| AMP-dependent synthetase and ligase-like protein [Arabidopsis
thaliana]
gi|75308920|sp|Q9C9G2.1|AEE22_ARATH RecName: Full=Probable acyl-activating enzyme 22
gi|12325315|gb|AAG52596.1|AC016447_5 putative amp-binding protein; 53611-55674 [Arabidopsis thaliana]
gi|332196654|gb|AEE34775.1| AMP-dependent synthetase and ligase-like protein [Arabidopsis
thaliana]
Length = 535
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 257/463 (55%), Gaps = 63/463 (13%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH----------- 53
RLD ++ +L H++ K+LF+ PLA L L + + ++I
Sbjct: 97 RLDATSITTILRHAQPKILFIHRNFEPLAREILHLLSCDDLQLNLLVIFIDEYNSAKRVS 156
Query: 54 -DDVSATSSPTVGHPNFKWVQP----ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
+++ S +G P V+ ++E DP++LNYTSGTT+ PKGVV HRG ++ ++
Sbjct: 157 SEELDYESLIQMGEPTSPLVENMFRIQNEQDPISLNYTSGTTADPKGVVISHRGAYLTSL 216
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
+I W + PV+LW ++Y + L+ +DV + S + H
Sbjct: 217 GVIIGWEMSTCPVYLWI--------FAY-----------VSLQWMDVYMGNSSARGHQCV 257
Query: 169 HICGALVVLNMLSSSPSTKPLDR-----PVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
+ PLD PV ++T G+ PAA++ + + LGF V H YGL
Sbjct: 258 Y--------------EPRNPLDMSHRSGPVHLMTGGSPLPAALVKKVQRLGFQVLHVYGL 303
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TE G + C W+ +WN L + ++ LKARQG+ + +A++DV + ET SV HDG++ G
Sbjct: 304 TEATGPALFCEWQDEWNRLTENQQMELKARQGLGILSVAEVDVKYNETQESVPHDGKTMG 363
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV + +IM GYLK+ + + + + W TGD+GV+H DG++EIKDRSKD+IISGGEN
Sbjct: 364 EIVMKGNNIMKGYLKNSKATFEAFK-HGWLNTGDVGVIHPDGHIEIKDRSKDIIISGGEN 422
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL-KWELSKK-------PTEEAI 395
ISS EVE++LY +P + EVA+VA + WG+ PCAF+ L K E +K+ E+ +
Sbjct: 423 ISSVEVENILYKHPRVFEVAVVAMPHRVWGETPCAFIVLQKGETNKEDDEYKFVAREKEL 482
Query: 396 IEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
I++CR LPH+M + V+ +ELPK GKI K LR I +
Sbjct: 483 IDYCRENLPHFMCPRKVVFLEELPKNGNGKILKPNLRAITKGL 525
>gi|68535535|ref|YP_250240.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
gi|68263134|emb|CAI36622.1| acyl-CoA synthetase [Corynebacterium jeikeium K411]
Length = 557
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 149/365 (40%), Positives = 222/365 (60%), Gaps = 10/365 (2%)
Query: 77 EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSY 136
E + +A+NYTSGTT PKGV++ HRG ++ + + V+LWTLPMFH +GW
Sbjct: 184 ENETIAINYTSGTTGKPKGVIYTHRGAYLNALGQAHTQHFSHDTVYLWTLPMFHCSGWCT 243
Query: 137 SWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKIL 196
W AV T + LR V P ++ +I+ GVT +CGA VLN L + + + +++
Sbjct: 244 GWAAMAVSATQVALRAVRGPEMWELIRTEGVTAMCGAPAVLNTLVDDENKRRVTN-LRVT 302
Query: 197 TSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGV 256
T+GA P + R E++G V+H YGLTE+ G C + +W + RA LKARQGV
Sbjct: 303 TAGAPPSPTTITRCENIGVEVTHVYGLTESYGPFTVCEAQPEWADMTVRRRAVLKARQGV 362
Query: 257 RTIGLADMDVVHP-----ETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDND 311
+I D+ V+ P E + V DG + GEI+ IM GY KD+E ++ R
Sbjct: 363 ASITNEDVRVIEPTEHLDEALVDVPADGATLGEIILTGNGIMAGYFKDEEATAHAFR-GG 421
Query: 312 WFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKF 371
WF+TGD+GV+H +GY+++ DR+KDV++SGGENIS+ EVE + +P +++ A++ D+
Sbjct: 422 WFHTGDLGVMHPNGYIQLMDRAKDVVVSGGENISTIEVEQAVISHPDVSDCAVIGVPDEK 481
Query: 372 WGKRPCAFVSLKWEL---SKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQK 428
WG+RP A+V+L+ E + EEA+I +CRA + Y + V I DELP+T+TGK++K
Sbjct: 482 WGERPRAYVTLRPEARGGDESALEEAVIAYCRAHIAGYKVPRDVRILDELPRTSTGKVRK 541
Query: 429 FVLRE 433
LRE
Sbjct: 542 NELRE 546
>gi|421501879|ref|ZP_15948835.1| acyl-CoA synthetase, partial [Pseudomonas mendocina DLHK]
gi|400347163|gb|EJO95517.1| acyl-CoA synthetase, partial [Pseudomonas mendocina DLHK]
Length = 446
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 211/351 (60%), Gaps = 18/351 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + ++ +L H E+K++ D + + AA+ + P V+ DD V
Sbjct: 101 RLDAEAIAFMLQHGEAKVVIADREFHDVIHAAIGMLDH----PPLVIDVDDPEYGEGQAV 156
Query: 65 -----------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G P F W P EW ++LNYTSGTT +PKGVV+ HRG F+ + + +
Sbjct: 157 SELDYEAFLAEGDPEFAWQWPTDEWQAISLNYTSGTTGNPKGVVYHHRGAFLNAMGNQMT 216
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
W + N PV+LWTLPMFH NGW Y W + A+ G ++ LR+VD I ++I+ VTH+CGA
Sbjct: 217 WAMGNHPVYLWTLPMFHCNGWCYPWTVTALAGVHVFLRRVDPAKILTLIRDEQVTHLCGA 276
Query: 174 LVVLNMLSSSP--STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
+VLN L + P + +D PVK + +GA+PPA V+ E +G V+H YGLTE G V
Sbjct: 277 PIVLNALVNMPAEAKAAIDHPVKAMVAGAAPPAKVIGAVEEMGIHVTHVYGLTEVYGPVT 336
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
CAW ++W+ L ERA +KARQGVR L + V P+T V DGQ+ GEI R +
Sbjct: 337 LCAWHAEWDELPLEERATIKARQGVRYPTLEGVIVADPKTLEPVPRDGQTIGEIFMRGNT 396
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
+M GYLK+ ++ + WF+TGD+GV H+DGY+EI+DR KD+IISGGE
Sbjct: 397 VMKGYLKNPSATAEAF-EGGWFHTGDLGVCHADGYVEIRDRLKDIIISGGE 446
>gi|444431474|ref|ZP_21226639.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
gi|443887580|dbj|GAC68360.1| putative fatty-acid--CoA ligase [Gordonia soli NBRC 108243]
Length = 529
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/432 (37%), Positives = 247/432 (57%), Gaps = 17/432 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD----VSATS 60
RL + ++ +L HS + +L + + A A ++ V D+ ++
Sbjct: 103 RLSERELTYILSHSGAAVLIATVEFADRARAVGEAVGVRVLVAGEVDGRDEYEELLARAD 162
Query: 61 SPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP 120
P P + + +A+NYTSGTT PKGV++ HRG ++ +++ +
Sbjct: 163 EPVRREPEERGL--------LAINYTSGTTGRPKGVMYHHRGAYLQSLAMAHHAGLGPAT 214
Query: 121 VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML 180
+LWTLPMFH +GW ++W + A GGT++CLR +D I+ + G+TH A VL M+
Sbjct: 215 NYLWTLPMFHCDGWCFTWAVTAAGGTHVCLRAIDPGQIWRHLTEDGITHFSAAPTVLTMI 274
Query: 181 SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWN 240
+ P+ + LDR V T GA P A+L R LG V+H YG+TET G +V W+ +W+
Sbjct: 275 AEDPTARRLDRTVAAGTGGAPPSPALLSRMTRLGIDVTHLYGMTETFGPIVVNQWQPEWD 334
Query: 241 TLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQ 300
D +RA ARQG+ I + VV + G V DG++ GE++ R +MLGY +D
Sbjct: 335 GGTDDDRAVRSARQGIGNIASGRVRVVAGD-GTDVAADGETTGELLVRGNIVMLGYYRDP 393
Query: 301 EGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAIN 360
+ ++ +D+ W TGDI V+H DGY+EI+DRSKDVIISGGENI+S E+E VL +P +
Sbjct: 394 DATAAASQDS-WLRTGDIAVMHPDGYVEIQDRSKDVIISGGENIASVEIERVLDAHPDVV 452
Query: 361 EVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPK 420
E A+V + D+ WG+ P A+V+++ + + + +++ R L + K ++ D LPK
Sbjct: 453 ESAVVGRADERWGEVPVAYVTVR--AGARVSTDDLLDHVRRELARFKVPKEIVFAD-LPK 509
Query: 421 TATGKIQKFVLR 432
T+TGKIQK VLR
Sbjct: 510 TSTGKIQKNVLR 521
>gi|359426255|ref|ZP_09217340.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
gi|358238296|dbj|GAB06922.1| putative fatty-acid--CoA ligase [Gordonia amarae NBRC 15530]
Length = 540
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/447 (36%), Positives = 242/447 (54%), Gaps = 25/447 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL ++ +L+HSE+ +L D + A + PS L V + D T +
Sbjct: 96 RLAGAELAYILNHSEATILVADSEFHSTVAAIADVIPS---LHTVVEVEDPEFGTPAGVE 152
Query: 64 -----VGHPNF----------KWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITV 108
V + F W + E + +NYTSGTT PKGV++ HRG ++ +
Sbjct: 153 EIEGLVSYAEFLSGAGDLPARPWTV-DDENTVITINYTSGTTGKPKGVMYTHRGAYLNSF 211
Query: 109 SSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVT 168
+ +LWTLPMFH NGW W + A GT+ICLR V I+S I G T
Sbjct: 212 GETFHNQFTGHTRYLWTLPMFHCNGWCTPWAVTAASGTHICLRAVRADAIWSAIDDLGAT 271
Query: 169 HICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
H+CGA V + + LDRP++I T+GA P V+ + ++G V H YGLTE G
Sbjct: 272 HMCGAPTVCTTIVGAEQAHELDRPLRITTAGAPPSPTVIGQLSAIGITVVHVYGLTEVYG 331
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG--MSVKHDGQSQGEIV 286
C ++ W+ L+ ERA+ +RQGV + D+ V+ E + V DG++ GEI+
Sbjct: 332 PFTICEYQDAWDDLSADERAKKLSRQGVSMVQAEDVRVIDREQQGLVDVPADGETMGEIL 391
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
R ++M GY KD ++ WF+TGD+GV+H DGY++++DR+KD+IISGGENIS+
Sbjct: 392 LRGNNVMAGYFKDPAATAEAFA-GGWFHTGDLGVMHPDGYVQLRDRAKDIIISGGENIST 450
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
EVE L + A+ +VA+V D+ WG+RP A+V L T E +I + R L Y
Sbjct: 451 VEVEQALVSHDAVLDVAVVGVPDEKWGERPRAYVLLN--PGATLTAEELIAYGRKMLAGY 508
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLRE 433
+ ++ D+LP+T+TGK+ KF LR+
Sbjct: 509 KIPRDIVFPDDLPRTSTGKVMKFELRK 535
>gi|260579717|ref|ZP_05847576.1| AMP-binding enzyme family protein [Corynebacterium jeikeium ATCC
43734]
gi|258602147|gb|EEW15465.1| AMP-binding enzyme family protein [Corynebacterium jeikeium ATCC
43734]
Length = 557
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 222/365 (60%), Gaps = 10/365 (2%)
Query: 77 EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSY 136
E + +A+NYTSGTT PKGV++ HRG ++ + + V+LWTLPMFH +GW
Sbjct: 184 ENETIAINYTSGTTGKPKGVIYTHRGAYLNALGQAHTQHFSHDTVYLWTLPMFHCSGWCT 243
Query: 137 SWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKIL 196
W AV T + LR V P ++ +I+ GVT +CGA VLN L + + + +++
Sbjct: 244 GWAAMAVSATQVALRAVRGPEMWELIRTEGVTAMCGAPAVLNTLVDDENKRRVTN-LRVT 302
Query: 197 TSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGV 256
T+GA P + R E++G V+H YGLTE+ G C + +W + RA LKARQGV
Sbjct: 303 TAGAPPSPTTITRCENIGVEVTHVYGLTESYGPFTVCEAQPEWADMTVRRRAVLKARQGV 362
Query: 257 RTIGLADMDVVHP-----ETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDND 311
++ D+ V+ P E + V DG + GEI+ IM GY KD+E ++ R
Sbjct: 363 ASVTNEDVRVIEPTEHLDEALVDVPADGATLGEIILTGNGIMAGYFKDEEATAHAFR-GG 421
Query: 312 WFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKF 371
WF+TGD+GV+H +GY+++ DR+KDV++SGGENIS+ EVE + +P I++ A++ D+
Sbjct: 422 WFHTGDLGVMHPNGYIQLMDRAKDVVVSGGENISTIEVEQAVISHPDISDCAVIGVPDEK 481
Query: 372 WGKRPCAFVSLKWEL---SKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQK 428
WG+RP A+V+L+ E + EEA+I +CRA + Y + V I +ELP+T+TGK++K
Sbjct: 482 WGERPRAYVTLRPEARGGDESALEEAVIAYCRAHIAGYKVPRDVRILEELPRTSTGKVRK 541
Query: 429 FVLRE 433
LRE
Sbjct: 542 NELRE 546
>gi|284990824|ref|YP_003409378.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
gi|284064069|gb|ADB75007.1| AMP-dependent synthetase and ligase [Geodermatophilus obscurus DSM
43160]
Length = 521
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 167/435 (38%), Positives = 243/435 (55%), Gaps = 17/435 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L HS + +L D +P A + ++ + ++ +
Sbjct: 92 RLKGNELEYILQHSGAAVLVADAAFAPTATEVAAAVGIPVVVAGGEADEYEQLLDAAEPL 151
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
P + EW +ALNYTSGTT PKGV++ HRG ++ ++ + + +LW
Sbjct: 152 ARPC------DDEWGLLALNYTSGTTGRPKGVMYSHRGAYLQALAMALHTGLGPTSQYLW 205
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSP 184
TLPMFH +GW + W ++A G T++CL +V+ I+ +++ G+TH A VL M++S+
Sbjct: 206 TLPMFHCDGWCFPWAVSAGGSTHVCLPRVEPARIWQLLRTEGITHFSAAPTVLTMIASAE 265
Query: 185 STK--PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTL 242
+ P+ V + T GA P +L R +L V+H YGLTET G V W +W+ L
Sbjct: 266 EAEAGPVSPRVAVQTGGAPPTPTLLARMSALNMDVTHLYGLTETYGPVAVNQWHPEWDDL 325
Query: 243 ADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEG 302
D +A LKARQGV + + VV E G V DG++ GEIV R +MLGY +D+E
Sbjct: 326 PDERQAELKARQGVANVVAQPLRVVG-EDGADVPCDGETIGEIVARGNDVMLGYYQDEEA 384
Query: 303 SSLCMRDN-----DWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
++ WF TGD+ VVH DGYLEI+DRSKD+IISGGENISS EVE L +P
Sbjct: 385 TAKATLPGPDGGPGWFRTGDLAVVHPDGYLEIRDRSKDIIISGGENISSVEVERALDAHP 444
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDE 417
A+ E A+VA+ + WG+ P A V+L+ + T+E + F R+RL + K + E
Sbjct: 445 AVLESAVVAEPHEKWGEVPVAHVTLR--PGSEVTDEELAAFVRSRLAGFKVPKRFVY-GE 501
Query: 418 LPKTATGKIQKFVLR 432
LPKT+TGK+QK LR
Sbjct: 502 LPKTSTGKVQKNELR 516
>gi|419962482|ref|ZP_14478473.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus opacus M213]
gi|414572120|gb|EKT82822.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus opacus M213]
Length = 534
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 243/443 (54%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS--------NTILPKPVL----- 51
RL + + +L HS + LLFVD + A PS ++ + +PV+
Sbjct: 96 RLAGRELEYILEHSGTSLLFVDSELVGSVATARDAVPSLREVIEIPDSTIARPVVPEGIA 155
Query: 52 --IHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
++ D A + +P W + E +A+NYTSGTT PKGV++ HRG ++ ++
Sbjct: 156 TGMYADFLAAADDVDDNP-LHW-GVDDEQQVIAINYTSGTTGKPKGVMYTHRGAYLNSLG 213
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+LWTLPMFH NGW W + GT+ICLR V I+ I GVTH
Sbjct: 214 ETFHNGFTGSTKYLWTLPMFHCNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTH 273
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+CGA V + ++ +P P+D ++I T+ A P V+ + E++G V H YGLTE G
Sbjct: 274 LCGAPAVCSTIAEAPQAHPVDA-LRITTAAAPPSPTVIAQLEAIGVTVVHVYGLTEVYGP 332
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C ++ W+ ERA L +RQGV + + VV + V DG++ GEIV R
Sbjct: 333 YTICEYQESWSERTAEERASLLSRQGVGMVQAENARVVDAQM-TDVPADGETMGEIVLRG 391
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++MLGY ++ E ++ WF+TGD+GV+H DGY+++KDR+KD++ISGGENIS+ EV
Sbjct: 392 NNVMLGYYRNPEATAEAFA-GGWFHTGDLGVMHPDGYIQLKDRAKDIVISGGENISTIEV 450
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L +PA+ +VA++ WG+RP AFV ++ T E ++E R R+ +
Sbjct: 451 EQALITHPAVLDVAVIGVPHPKWGERPKAFVIVR--KGATVTAEELVEHTRGRIAKFKVP 508
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
++ ELP+T TGK+ KF LR
Sbjct: 509 DEIVFPLELPRTPTGKVLKFELR 531
>gi|424856778|ref|ZP_18280986.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356662913|gb|EHI43092.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 534
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 163/443 (36%), Positives = 242/443 (54%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS--------NTILPKPVL----- 51
RL + + +L HS + LLFVD + A + PS ++ + +PV+
Sbjct: 96 RLAGRELEYILEHSGTSLLFVDSELVGSVATARAAVPSLREVIEIPDSTIARPVVPEGIT 155
Query: 52 --IHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
++ D A + G W + E +A+NYTSGTT PKGV++ HRG ++ ++
Sbjct: 156 TGLYADFLAAADDVDGT-LLHW-GVDDEQQVIAINYTSGTTGKPKGVMYTHRGAYLNSLG 213
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+LWTLPMFH NGW W + GT+ICLR V I+ I GVTH
Sbjct: 214 ETFHNGFTGSTKYLWTLPMFHCNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTH 273
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+CGA V + ++ +P P+D ++I T+ A P V+ + E++G V H YGLTE G
Sbjct: 274 LCGAPAVCSTIAEAPQAHPVD-ALRITTAAAPPSPTVIAQLEAIGVTVVHVYGLTEVYGP 332
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C ++ W+ ERA L +RQGV + + VV + V DG++ GEIV R
Sbjct: 333 YTICEYQESWSERTPEERASLLSRQGVGMVQAENARVVDAQMN-DVPADGETMGEIVLRG 391
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++MLGY ++ E + WF+TGD+GV+H DGY+++KDR+KD++ISGGENIS+ EV
Sbjct: 392 NNVMLGYYRNPEATEEAFA-GGWFHTGDLGVLHPDGYIQLKDRAKDIVISGGENISTIEV 450
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L +PA+ +VA++ WG+RP AFV ++ T E ++E R RL +
Sbjct: 451 EQALRTHPAVLDVAVIGVPHPKWGERPKAFVIVR--KGATVTAEELVEHTRGRLAKFKVP 508
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
++ ELP+T TGK+ KF LR
Sbjct: 509 DEIVFPHELPRTPTGKVLKFELR 531
>gi|226187606|dbj|BAH35710.1| putative fatty-acid--CoA ligase [Rhodococcus erythropolis PR4]
Length = 534
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/442 (36%), Positives = 245/442 (55%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ---------SSPLALAALSLFPSNTILPKPVLIHDD 55
RL + +L HS + +LFVD + ++ +L + P T+ P P +
Sbjct: 96 RLAGPELEYILDHSGTTILFVDSEFVGSVTSSKANVTSLREIIEIPDFTV-PSPEVPTGI 154
Query: 56 VSATSSPTVGHPNFKWVQP-----ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
V+ + + QP + E +A+NYTSGTT PKGV++ HRG ++ ++
Sbjct: 155 VTGQYADLIAEGQALTDQPLHWGVDDEQQCIAINYTSGTTGKPKGVMYSHRGAYLNSLGE 214
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+LWTLPMFH NGW W + GT+ICLR V I+ I + GVTH+
Sbjct: 215 TFHNGFDGSTKYLWTLPMFHCNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDNLGVTHL 274
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA V + ++ + ++ ++I T+GA P ++ + E +G V H YGLTE G
Sbjct: 275 CGAPTVCSTIADADQAHKVE-ALRITTAGAPPSPTIIGKLEDIGVTVVHVYGLTEVYGPY 333
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C ++ W+ +ERA L +RQGV + + VV E V DGQ+ GEIV R
Sbjct: 334 TICEYQEAWDDKPQSERAALLSRQGVGMVQAENARVVDAEMN-DVPADGQTMGEIVLRGN 392
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++MLGY +D+ ++ WF++GD+GV+H DGY+++KDR+KD+IISGGENIS+ EVE
Sbjct: 393 NVMLGYYRDEAATAEAFA-GGWFHSGDLGVMHPDGYIQLKDRAKDIIISGGENISTVEVE 451
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+ +PA+ +VA+V D+ WG+RP AFV L L + + E I+E RA L Y +
Sbjct: 452 QAIMSHPAVIDVAVVGVPDEKWGERPKAFVVLGKGL--QASAEDIVEHTRALLAGYKVPR 509
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
++ +LP+T TGK+ KF LR
Sbjct: 510 DIVFPLDLPRTPTGKVLKFQLR 531
>gi|229488762|ref|ZP_04382628.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus erythropolis
SK121]
gi|229324266|gb|EEN90021.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus erythropolis
SK121]
Length = 534
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/442 (36%), Positives = 245/442 (55%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ---------SSPLALAALSLFPSNTILPKPVLIHDD 55
RL + +L HS + +LFVD + ++ +L + P +T+ P P +
Sbjct: 96 RLAGPELEYILDHSGTTILFVDSEFVGSVTSSKANVESLREIVEIPDSTV-PYPDVPTGI 154
Query: 56 VSATSSPTVGHPNFKWVQP-----ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
V+ + + QP + E +A+NYTSGTT PKGV++ HRG ++ ++
Sbjct: 155 VTGQYADLIAEGEALSDQPLHWGVDDEQQCIAINYTSGTTGKPKGVMYSHRGAYLNSLGE 214
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+LWTLPMFH NGW W + GT+ICLR V I+ I + GVTH+
Sbjct: 215 TFHNGFDGATKYLWTLPMFHCNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDNLGVTHL 274
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA V + ++ + +D ++I T+GA P ++ + E +G V H YGLTE G
Sbjct: 275 CGAPTVCSTIADADQAHKVDA-LRITTAGAPPSPTIIGKLEDIGVTVVHVYGLTEVYGPY 333
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C ++ W+ +ERA L +RQGV + + VV E V DGQ+ GEIV R
Sbjct: 334 TICEYQEAWDDKPQSERAALLSRQGVGMVQAENARVVDAEMN-DVPADGQTMGEIVLRGN 392
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++MLGY +D+ ++ WF++GD+GV+H DGY+++KDR+KD+IISGGENIS+ EVE
Sbjct: 393 NVMLGYYRDEAATAEAFA-GGWFHSGDLGVMHPDGYIQLKDRAKDIIISGGENISTVEVE 451
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+ +PA+ +VA+V D+ WG+RP AFV L L + + E I+E R L Y +
Sbjct: 452 QAIMSHPAVIDVAVVGVPDEKWGERPKAFVVLGKGL--QASAEDIVEHTRTLLAGYKVPR 509
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
++ +LP+T TGK+ KF LR
Sbjct: 510 DIVFPLDLPRTPTGKVLKFQLR 531
>gi|297172468|gb|ADI23441.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [uncultured
gamma proteobacterium HF0770_33G18]
Length = 313
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/313 (48%), Positives = 208/313 (66%), Gaps = 5/313 (1%)
Query: 128 MFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML--SSSPS 185
MFH NGW + W + AV GT++CLRKVD IYS I +GVTH C A V+LN++ +++
Sbjct: 1 MFHCNGWCFPWSLGAVAGTSVCLRKVDAVNIYSAIVDYGVTHFCAAPVILNLVVNAAAEE 60
Query: 186 TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADT 245
+ L V ++T+ A PPAAVL E GF ++H YGLTET G V CAW +WN L
Sbjct: 61 KRALPHTVHVMTAAAPPPAAVLAAMEEAGFSMTHVYGLTETYGPAVICAWHREWNQLPLE 120
Query: 246 ERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSL 305
E+A++K+RQGV L ++ +++P+T V DG S GE +FR +M GYLK+ +
Sbjct: 121 EQAKIKSRQGVPYHALEELQILNPDTLQPVPADGSSMGEAMFRGNVVMKGYLKNSTATKE 180
Query: 306 CMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALV 365
WF++GD+GV H+D Y+++KDRSKD+IISGGEN+SS E+E VLY +PA+ E A+V
Sbjct: 181 AF-SGGWFHSGDLGVTHADRYIQLKDRSKDIIISGGENVSSIEIEDVLYKHPAVLEAAVV 239
Query: 366 AQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGK 425
A+ D WG+ PCAFV+LK + E +IEFCR + HY + K++I LPKT+TGK
Sbjct: 240 ARPDNKWGETPCAFVTLKLS-ADHVDERTLIEFCRNNMAHYKSPKTIIF-GSLPKTSTGK 297
Query: 426 IQKFVLREIVNAV 438
+QKF LRE NA+
Sbjct: 298 VQKFKLREQTNAL 310
>gi|453070047|ref|ZP_21973299.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
gi|452761693|gb|EME19992.1| fatty-acid--CoA ligase [Rhodococcus qingshengii BKS 20-40]
Length = 534
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/442 (36%), Positives = 245/442 (55%), Gaps = 20/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ---------SSPLALAALSLFPSNTILPKPVLIHDD 55
RL + +L HS + +LFVD + ++ +L + P +T+ P P +
Sbjct: 96 RLAGPELEYILDHSGTTILFVDSEFVGSVTSSKANVGSLREIVEIPDSTV-PYPDVPTGI 154
Query: 56 VSATSSPTVGHPNFKWVQP-----ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
V+ + + QP + E +A+NYTSGTT PKGV++ HRG ++ ++
Sbjct: 155 VTGQYADLIAEGEALSDQPLHWGVDDEQQCIAINYTSGTTGKPKGVMYSHRGAYLNSLGE 214
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+LWTLPMFH NGW W + GT+ICLR V I+ I + GVTH+
Sbjct: 215 TFHNGFDGATKYLWTLPMFHCNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDNLGVTHL 274
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA V + ++ + +D ++I T+GA P ++ + E +G V H YGLTE G
Sbjct: 275 CGAPTVCSTIADADQAHKVDA-LRITTAGAPPSPTIIGKLEDIGVTVVHVYGLTEVYGPY 333
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C ++ W+ +ERA L +RQGV + + VV E + DGQ+ GEIV R
Sbjct: 334 TICEYQEAWDDKPQSERAALLSRQGVGMVQAENARVVDAEMN-DIPADGQTMGEIVLRGN 392
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++MLGY +D+ ++ WF++GD+GV+H DGY+++KDR+KD+IISGGENIS+ EVE
Sbjct: 393 NVMLGYYRDEAATAEAFA-GGWFHSGDLGVMHPDGYIQLKDRAKDIIISGGENISTVEVE 451
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+ +PA+ +VA+V D+ WG+RP AFV L L + + E I+E R L Y +
Sbjct: 452 QAIMSHPAVIDVAVVGVPDEKWGERPKAFVVLGKGL--QASAEDIVEHTRTLLAGYKVPR 509
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
++ +LP+T TGK+ KF LR
Sbjct: 510 DIVFPLDLPRTPTGKVLKFQLR 531
>gi|114705184|ref|ZP_01438092.1| acyl-CoA synthase [Fulvimarina pelagi HTCC2506]
gi|114539969|gb|EAU43089.1| acyl-CoA synthase [Fulvimarina pelagi HTCC2506]
Length = 536
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 175/439 (39%), Positives = 250/439 (56%), Gaps = 15/439 (3%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
+V R++ K V+ +L H+ES+L+ D + A A T +P V D S
Sbjct: 96 SVNTRIEAKDVAFILKHAESRLILADPTCADDARKAAQ----ETGVPIEVFAEDGESGDG 151
Query: 61 SPTVGH---PNFKWV-QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ P + + EW P+ALNYTSGTT +PKGVV HRG ++ V ++ +
Sbjct: 152 LKLLSGERPPEIDLIAEITDEWQPIALNYTSGTTGNPKGVVLHHRGAWLNAVGNITALQF 211
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
++ +LWTLPMFH NGW ++W + A GGT++CL KV ++ + GVTH+ A VV
Sbjct: 212 NDKTAYLWTLPMFHCNGWCHTWSITAAGGTHVCLDKVVPEAVFEAMDRIGVTHLSCAPVV 271
Query: 177 LNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
L ML +S + + D R + + T GA+P A+++ + ++LGF H YGLTE G
Sbjct: 272 LYMLINSDAKEKRDASRRITVATGGAAPTASLIKQMDALGFDFIHLYGLTECYGPTSIRE 331
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
L ERA L ARQGVR + + VV+ E G V DG + GEIV +++
Sbjct: 332 LNEHEAGLDVEERANLLARQGVRHLSANRIRVVNDE-GAEVPADGTTVGEIVLTGNTLLA 390
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GY ++ + + F+TGD+ V H DG++EIKDR+KDVII+GGEN+SS EVE VL
Sbjct: 391 GYYRNPDETEKAFAGGG-FHTGDLAVRHPDGHIEIKDRAKDVIITGGENVSSLEVEDVLS 449
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + A+VA+ D+ WG+ P AF+ K S +P E + FCR LP + ++
Sbjct: 450 KHPDVAIAAVVAKPDEKWGEIPMAFIEAKSGTSPQP--ETLETFCREHLPGFKIPRAWAF 507
Query: 415 EDELPKTATGKIQKFVLRE 433
ELPKTATGKIQK+VLRE
Sbjct: 508 -CELPKTATGKIQKYVLRE 525
>gi|432336531|ref|ZP_19588029.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus
wratislaviensis IFP 2016]
gi|430776546|gb|ELB91971.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus
wratislaviensis IFP 2016]
Length = 534
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 242/443 (54%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS--------NTILPKPVL----- 51
RL + + +L HS + LLFVD + A PS ++ + +PV+
Sbjct: 96 RLAGRELEYILEHSGTSLLFVDSELVGSVATARHAVPSLREVIEIPDSTIARPVVPEGIA 155
Query: 52 --IHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
++ D A + P V E + +A+NYTSGTT PKGV++ HRG ++ ++
Sbjct: 156 TGMYADFLAAADDVDDIPLHWGVNDEQQV--IAINYTSGTTGKPKGVMYTHRGAYLNSLG 213
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+LWTLPMFH NGW W + GT+ICLR V I+ I GVTH
Sbjct: 214 ETFHNGFTGSTKYLWTLPMFHCNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTH 273
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+CGA V + ++ +P P+D ++I T+ A P V+ + E++G V H YGLTE G
Sbjct: 274 LCGAPAVCSTIAEAPQAHPVDA-LRITTAAAPPSPTVIAQLEAIGVTVVHVYGLTEVYGP 332
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C ++ W+ ERA L +RQGV + + VV + V DG++ GEIV R
Sbjct: 333 YTICEYQESWSERTAEERASLLSRQGVGMVQAENARVVDAQMN-DVPADGETMGEIVLRG 391
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++MLGY ++ E ++ WF+TGD+GV+H DGY+++KDR+KD++ISGGENIS+ EV
Sbjct: 392 NNVMLGYYRNPEATAEAFA-GGWFHTGDLGVMHPDGYIQLKDRAKDIVISGGENISTIEV 450
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L +PA+ +VA++ WG+RP AFV ++ T E ++E R R+ +
Sbjct: 451 EQALITHPAVLDVAVIGVPHPKWGERPKAFVIVR--KGATVTAEELVEHTRGRIAKFKVP 508
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
++ ELP+T TGK+ KF LR
Sbjct: 509 DEIVFPLELPRTPTGKVLKFELR 531
>gi|404422178|ref|ZP_11003875.1| acyl-CoA synthetase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
gi|403657833|gb|EJZ12588.1| acyl-CoA synthetase [Mycobacterium fortuitum subsp. fortuitum DSM
46621]
Length = 528
Score = 288 bits (737), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 170/434 (39%), Positives = 248/434 (57%), Gaps = 12/434 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL ++ +L HSE+ ++ +PLA A+SL + ++ A + P V
Sbjct: 96 RLSAGEIAYILQHSEADVVIATDALTPLAAEAISLAGRSVRTLAGSEEYEATIAAAEP-V 154
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
G+P E P+A+NYTSGTT PKGVV+ HRG ++ +++ + +LW
Sbjct: 155 GNP------LTDELSPLAINYTSGTTGKPKGVVYSHRGAYLQSLAMAFHSGMDLNSSYLW 208
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSP 184
TLPMFH NGW ++W + AVG T++CL KVD I+ + H +TH+C A VL+ +++
Sbjct: 209 TLPMFHCNGWCFTWAVTAVGATHVCLPKVDADAIWHAVDQHEITHMCAAPTVLSSMTADA 268
Query: 185 STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLAD 244
+ DR V + T GA P A+L R + G V+H YG+TET G V WK +W +L +
Sbjct: 269 RERSGDRSVWVATGGAPPAPALLARARACGLDVTHLYGMTETYGPAVINEWKREWTSLPN 328
Query: 245 TERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
++R RL ARQG+ I ++D+ V E G V D + GEI R ++ Y +D ++
Sbjct: 329 SDRDRLNARQGIGNI-VSDVVRVLDEQGRDVPADAATVGEIALRGNNVTPEYYRDPAATA 387
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
+ D WF +GD+ V H DGYLEI+DR+KDVIISGGENISS E+E + +PA+ E A+
Sbjct: 388 AAVPDG-WFRSGDLAVRHPDGYLEIRDRAKDVIISGGENISSVEIERAILEHPAVLEAAV 446
Query: 365 VAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATG 424
VA WG+RP AFVSL+ + T I + R+ + + ELPKTATG
Sbjct: 447 VAMPHAHWGERPVAFVSLRSGVDV--TGNDIRDHLCDRIAKFKIPDRIEFT-ELPKTATG 503
Query: 425 KIQKFVLREIVNAV 438
KI+KF L++ + V
Sbjct: 504 KIRKFELKKQLGQV 517
>gi|339626426|ref|YP_004718069.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
gi|379005885|ref|YP_005255336.1| o-succinylbenzoate--CoA ligase [Sulfobacillus acidophilus DSM
10332]
gi|339284215|gb|AEJ38326.1| AMP-dependent synthetase and ligase [Sulfobacillus acidophilus TPY]
gi|361052147|gb|AEW03664.1| o-succinylbenzoate--CoA ligase [Sulfobacillus acidophilus DSM
10332]
Length = 520
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 181/433 (41%), Positives = 254/433 (58%), Gaps = 15/433 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL---ALAALSLFPSNTILPKPVLIHDD-VSATS 60
RL + +L HS S+ L D + PL L L + P L ++D +S S
Sbjct: 88 RLTPEEYRYILTHSGSRALIADGRLWPLIAPVAEGLPLILVDGDAPPGTLAYEDWLSRQS 147
Query: 61 SPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP 120
+ + + E + LNYTSGTTS PKGV+ HR F+ V+ L+ R+
Sbjct: 148 ADPIP------LDVPDENGLITLNYTSGTTSRPKGVMLTHRNTFMNAVNFLLHHRMAITD 201
Query: 121 VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML 180
+L TLP+FH NGW +W + AVG ++ + KV+ ++ +I GVT +CGA VLNML
Sbjct: 202 RYLHTLPLFHVNGWGDAWAVTAVGAVHVMMSKVEGQAMWDLIHQEGVTALCGAPAVLNML 261
Query: 181 SSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWN 240
+++P PLD PV+I T+GA PPAA+L G + H YGLTE + ++ + + +
Sbjct: 262 ATTPHA-PLDHPVRIATAGAPPPAALLQTLAQEGIEILHVYGLTEVSPWITVSEIRPEDH 320
Query: 241 TLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQ 300
TL+ A + QGV I ++ VVH E G V HDGQ GEIV RS +M GY +D
Sbjct: 321 TLSPEALAAKMSCQGVEQILAGEVKVVH-EDGTEVAHDGQDLGEIVNRSNVVMAGYYQDP 379
Query: 301 EGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAIN 360
E ++ +RD WF+TGD+ VVHSDG ++I+DR+KD+IISGGENISS EVE VLY +P +
Sbjct: 380 EKTAEVIRDG-WFHTGDLAVVHSDGSIQIRDRAKDIIISGGENISSVEVEDVLYRHPGVY 438
Query: 361 EVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPK 420
E A+VA D WG+ P AF+ K ++ T E + +FCR RL HY S + LP+
Sbjct: 439 EAAVVAVPDDKWGETPKAFIVPKPGMTV--TAEELRQFCRDRLAHYKVPTSFEFVEALPR 496
Query: 421 TATGKIQKFVLRE 433
TA+GK+QK+VLR+
Sbjct: 497 TASGKVQKYVLRK 509
>gi|146303179|ref|YP_001190495.1| AMP-dependent synthetase and ligase [Metallosphaera sedula DSM
5348]
gi|145701429|gb|ABP94571.1| AMP-dependent synthetase and ligase [Metallosphaera sedula DSM
5348]
Length = 549
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 169/449 (37%), Positives = 253/449 (56%), Gaps = 27/449 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL K ++ +++HS+SK + VD P + L + + I + +L+ D + ++S T
Sbjct: 105 RLSPKEMAYIINHSDSKFVVVD---EPYLNSLLEV--KDQIKAEIILLEDPDNPSASETA 159
Query: 65 --------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G + + + E+ + L YTSGTT PKGV+H HRG F+ ++
Sbjct: 160 RKEVRMTYRELVKGGSRDPLPIPAKEEYSMITLYYTSGTTGLPKGVMHHHRGAFLNAMAE 219
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++ ++ V+LWTLPMFH W +SW AVG TN+CL KVD P+IY +++ VTH+
Sbjct: 220 VLEHQMDLNSVYLWTLPMFHAASWGFSWATVAVGATNVCLDKVDYPLIYRLVEKERVTHM 279
Query: 171 CGALVVLNMLSSSPSTKPLD--RPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAG 228
C A V L+ L V +L +GA+P A L + +G + H YGLTET G
Sbjct: 280 CAAPTVYVNLADYMKRNNLKFSNRVHMLVAGAAPAPATLKAMQEIGGYMCHVYGLTETYG 339
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C W+ +W++L E+A+LKARQG+ + +MDV G V DG++ GE+V R
Sbjct: 340 PHSICEWRREWDSLPLEEQAKLKARQGIPYVSF-EMDVFDA-NGKPVPWDGKTIGEVVMR 397
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++ LGY K+ E ++ RD WF++GD VVH DGY+EI DR KD+I +GGE +SS
Sbjct: 398 GHNVALGYYKNPEKTAESFRDG-WFHSGDAAVVHPDGYIEIVDRFKDLINTGGEKVSSIL 456
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE L P + VA+ D+ WG+ A + L+ + K TEE +I+FC+ RL H+
Sbjct: 457 VEKTLMEIPGVKAVAVYGTPDEKWGEVVTARIELQEGV--KLTEEEVIKFCKERLAHFEC 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNA 437
K ++ +P TATGK+QK+VLR A
Sbjct: 515 PK-IVEFGPIPMTATGKMQKYVLRNEAKA 542
>gi|384099935|ref|ZP_10001006.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus imtechensis
RKJ300]
gi|383842605|gb|EID81868.1| acyl CoA synthetase, AMP-binding protein [Rhodococcus imtechensis
RKJ300]
Length = 534
Score = 287 bits (735), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/443 (36%), Positives = 241/443 (54%), Gaps = 22/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPS--------NTILPKPVL----- 51
RL + + +L HS + LLFVD + A PS ++ + +PV+
Sbjct: 96 RLAGRELEYILEHSGTSLLFVDSELVGSVATARHAVPSLREVIEIPDSTIARPVVPEGIA 155
Query: 52 --IHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
++ D A + P W + E +A+NYTSGTT PKG ++ HRG ++ ++
Sbjct: 156 TGMYADFLAAADDVDDIP-LHW-GVDDEQQVIAINYTSGTTGKPKGAMYTHRGAYLNSLG 213
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+LWTLPMFH NGW W + GT+ICLR V I+ I GVTH
Sbjct: 214 ETFHNGFTGSTKYLWTLPMFHCNGWCTPWAVTQAAGTHICLRAVRADAIWDAIDTLGVTH 273
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+CGA V + ++ +P P+D ++I T+ A P V+ + E++G V H YGLTE G
Sbjct: 274 LCGAPAVCSTIAEAPQAHPVDA-LRITTAAAPPSPTVIAQLEAIGVTVVHVYGLTEVYGP 332
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
C ++ W+ ERA L +RQGV + + VV + V DG++ GEIV R
Sbjct: 333 YTICEYQESWSERTAEERASLLSRQGVGMVQAENARVVDAQMN-DVPADGETMGEIVLRG 391
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++MLGY ++ E ++ WF+TGD+GV+H DGY+++KDR+KD+IISGGENIS+ EV
Sbjct: 392 NNVMLGYYRNPEATAEAFA-GGWFHTGDLGVMHPDGYIQLKDRAKDIIISGGENISTIEV 450
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L +PA+ +VA++ WG+RP AFV ++ T E ++E R R+ +
Sbjct: 451 EQALITHPAVLDVAVIGVPHPKWGERPKAFVIVR--KGATVTAEELVEHTRGRIAKFKVP 508
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
++ ELP+T TGK+ KF LR
Sbjct: 509 DEIVFPLELPRTPTGKVLKFELR 531
>gi|15805365|ref|NP_294059.1| fatty-acid--CoA ligase [Deinococcus radiodurans R1]
gi|6458013|gb|AAF09918.1|AE001894_2 fatty-acid--CoA ligase, putative [Deinococcus radiodurans R1]
Length = 524
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 213/358 (59%), Gaps = 4/358 (1%)
Query: 75 ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGW 134
+ E + LN+TSGTTS PKGV+ HR + + ++ ++ V+L TLP FH NGW
Sbjct: 159 QDENGTITLNFTSGTTSDPKGVMMTHRSTMLNAIETIYYFKADQDTVYLHTLPDFHANGW 218
Query: 135 SYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVK 194
W VG T++ L V Y I+ HGVTH+C A VL+ML+ +PL R ++
Sbjct: 219 GGVWSPFGVGATHVTLPTVRADAAYDAIEQHGVTHLCAAPTVLSMLTDPAHARPLSRQIR 278
Query: 195 ILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQ 254
+ T+G+ P A ++ +LGF V+ YGLTET+ + +Q L RA L A+Q
Sbjct: 279 VATAGSPPHARIIADMNALGFHVTQVYGLTETSPLITVAELSAQQEELPTPRRAALIAKQ 338
Query: 255 GVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFY 314
GV I +++V+ PE V DG++ GEI+ R +M GY +++E ++ + + WF+
Sbjct: 339 GVEMILAGEVEVLDPEL-RPVPGDGETLGEIMVRGNLVMKGYYRNEEATAKAL-EGGWFH 396
Query: 315 TGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGK 374
TGD+ VVH DG +EI+DR+KDVIISGGENISS EVE VLY +PA+ E +VA + WG+
Sbjct: 397 TGDVAVVHPDGRIEIRDRNKDVIISGGENISSVEVEGVLYAHPAVREAVVVAMPHEKWGE 456
Query: 375 RPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
PCAF++L ++ T E + R L + K D+LPKTA+GK QKF+LR
Sbjct: 457 VPCAFIALHQ--GQEVTPEDLTAHVREHLAGFKVPKHYEFRDDLPKTASGKFQKFILR 512
>gi|407279809|ref|ZP_11108279.1| fatty-acid--CoA ligase [Rhodococcus sp. P14]
Length = 542
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/440 (38%), Positives = 244/440 (55%), Gaps = 17/440 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT----ILPKPVLIHDDVSATS 60
RL + +L HS + +LFVD + A + PS T I + I V+ +
Sbjct: 93 RLAPAELEYILDHSGASILFVDSEFLTSAATITTAVPSVTEIVEIPDSTITIEHPVTGVA 152
Query: 61 SPT--------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
+ T + WV + E P+A+NYTSGTT PKGV++ HRG ++ +V
Sbjct: 153 TTTYADLLAADITAAPLPWVVAD-ELTPIAINYTSGTTGKPKGVMYSHRGAYLNSVGETF 211
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+LWTLPMFH NGW W + A GGT++CLR V I+ I G+T++CG
Sbjct: 212 HNGFTGDTKYLWTLPMFHCNGWCTPWAVTAAGGTHVCLRAVRAEPIWEAIDTLGITNLCG 271
Query: 173 ALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
A V + ++ + PL P++I T+GA P ++ + E+LG V H YGLTE G
Sbjct: 272 APTVCSTIADAAQAHPLTTPLRITTAGAPPSPTIIGKLEALGVAVIHVYGLTEVYGPYTI 331
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C + W L ERA L +RQGV + VV P+ V DG S GEIV R ++
Sbjct: 332 CEPQESWAGLDPAERAVLISRQGVGMLQAETARVVDPQMN-DVPADGVSLGEIVLRGNNV 390
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
MLGY +D+E ++ WF+TGD+GV+H DGY+++KDR+KD+IISGGENIS+ EVE
Sbjct: 391 MLGYYRDEEATAKAFA-GGWFHTGDLGVMHPDGYIQLKDRAKDIIISGGENISTVEVEQA 449
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
+ +PA+ +VA+V D WG+RP AFV ++ + + E +I R L Y + +
Sbjct: 450 IVAHPAVADVAVVGVPDDKWGERPKAFVLVR--PGSEVSAEELIAHTRGLLAGYKIPRDI 507
Query: 413 IIEDELPKTATGKIQKFVLR 432
+ +LP+T+TGK++K LR
Sbjct: 508 VFASDLPRTSTGKVRKNELR 527
>gi|386855457|ref|YP_006259634.1| Fatty-acid--CoA ligase [Deinococcus gobiensis I-0]
gi|379998986|gb|AFD24176.1| Fatty-acid--CoA ligase, putative [Deinococcus gobiensis I-0]
Length = 521
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 212/356 (59%), Gaps = 4/356 (1%)
Query: 77 EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSY 136
E D + +N+TSGTTSSPKGV+ HR + ++ ++ V+L TLP FH NGW
Sbjct: 158 EDDTLTINFTSGTTSSPKGVMLTHRNSLLNATETIYSFKFDQDSVYLHTLPDFHANGWGG 217
Query: 137 SWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKIL 196
W VG T++ L V Y+ I+ +GVTH+C A VL+ML+ + +PL RPV+++
Sbjct: 218 VWSGFGVGVTHVTLPAVRAAEAYAAIEQYGVTHLCAAPTVLSMLTDPATARPLSRPVRVV 277
Query: 197 TSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGV 256
T+G+ P A + +LGF V+ +YGLTET+ + + L ERA L ARQG
Sbjct: 278 TAGSPPHARTIADMNALGFHVTQAYGLTETSPLITVAELSAAQEALPTAERAPLVARQGF 337
Query: 257 RTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTG 316
+ +++V+ E V HDGQ+ GEI+ R +M GY ++ E + + WF+TG
Sbjct: 338 EMLLAGEVEVL-AEDLSPVPHDGQTLGEIMVRGNLVMKGYFRNPEATERALA-GGWFHTG 395
Query: 317 DIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRP 376
D+ V H DG +EI+DR+KDVIISGGENISS E+E VLY +PA+ E +VA D WG+ P
Sbjct: 396 DVAVTHPDGRIEIRDRNKDVIISGGENISSVEIEGVLYAHPAVREAVVVAMPDPRWGEVP 455
Query: 377 CAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
CAFV+L + P E + R RL + K D+LPKTA+GK QKFVLR
Sbjct: 456 CAFVALHGGHAASP--EDLTAHVRTRLAGFKVPKHYEFRDDLPKTASGKFQKFVLR 509
>gi|172040420|ref|YP_001800134.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7109]
gi|171851724|emb|CAQ04700.1| acyl-CoA synthetase [Corynebacterium urealyticum DSM 7109]
Length = 546
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/363 (39%), Positives = 221/363 (60%), Gaps = 10/363 (2%)
Query: 79 DPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSW 138
+P+A+NYTSGTT PKG V+ HRG ++ + + + + V+LWTLPMFH +GW W
Sbjct: 175 EPIAINYTSGTTGRPKGAVYTHRGAYLNAIGEVNAQKFASDSVYLWTLPMFHCSGWCTGW 234
Query: 139 GMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTS 198
AV T + LR V P ++ +I G+TH+CGA VL L + + + + ++I+T+
Sbjct: 235 AAMAVSATQVTLRAVRGPEMWRLIAEEGITHMCGAPAVLTTLVDDENKRRV-KNLRIVTA 293
Query: 199 GASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRT 258
GA P ++ R E+LG V+H YGLTE+ G C + +W+ + RA LKARQGV
Sbjct: 294 GAPPSPTIITRCENLGIEVTHVYGLTESYGPFTVCEPQREWSDMTVRRRAVLKARQGVAL 353
Query: 259 IGLADMDVV-----HPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWF 313
I ++ V+ + ++ + V DG + GEIV +M GY +D+E + + R +F
Sbjct: 354 ITNEEVLVIEQTDENDDSIVEVPSDGATMGEIVMTGNGVMAGYFEDEEATRIAFR-GGYF 412
Query: 314 YTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWG 373
+TGD+GV H DGY+++ DR+KDV++SGGENIS+ EVE + P +++ A++ D+ WG
Sbjct: 413 HTGDLGVKHPDGYIQLLDRAKDVVVSGGENISTIEVEQAIVSYPDVSDCAVIGVPDEKWG 472
Query: 374 KRPCAFVSLKWELSKKPTE---EAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFV 430
+RP A+V L+ E E EAII CR + Y + ++I DELP+T+TGK++K
Sbjct: 473 ERPRAYVVLRSEARGDDPEAISEAIIAHCRVNMAGYKVPRDIVILDELPRTSTGKVRKKE 532
Query: 431 LRE 433
LR+
Sbjct: 533 LRD 535
>gi|424860765|ref|ZP_18284711.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
gi|356659237|gb|EHI39601.1| O-succinylbenzoate-CoA ligase [Rhodococcus opacus PD630]
Length = 539
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 244/444 (54%), Gaps = 22/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTIL------PKPVLIHDDVSA 58
RL + ++ + HSE+++L D L L P+ + P ++ V
Sbjct: 91 RLSAEEITYICDHSEARILIGDAA----LLRGLGEHPNLATVAEIVETPSQDGTYEQVPG 146
Query: 59 TSSPT----VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
T+S T GH + + E +A+NYTSGTT PKGV++ HRG ++ + L
Sbjct: 147 TTSYTGLLTRGHGEAIAWEVDDETRTIAINYTSGTTGRPKGVMYTHRGAYLNALGELHHQ 206
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
R +LWTLPMFH NGW +W + A GT++CLR V I+++I + H+ GA
Sbjct: 207 RFALDTKYLWTLPMFHCNGWCSAWAVTAAAGTHVCLRAVRGDAIWTLIDTEHINHLAGAP 266
Query: 175 VVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCA 234
VL++L+S+P PL P+ I+T+GA P + SLG + H YGLTET G C
Sbjct: 267 TVLSLLASAPQAHPLASPLLIVTAGAPPSPTTIDEIRSLGATLVHVYGLTETYGPYSVCE 326
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG-----MSVKHDGQSQGEIVFRS 289
K +W L +++RL ARQGV + + VV + V DG GEIV R
Sbjct: 327 EKPEWADLDPGQQSRLLARQGVGFLTADHLRVVREKLADDGSLTDVDSDGVEMGEIVMRG 386
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
++M GY +D G++ WF++GD+GV+H DGY+++ DR+KDV+ISGGENIS+ EV
Sbjct: 387 NNVMKGYYRDPAGTATAF-SGGWFHSGDLGVMHPDGYVQLLDRAKDVVISGGENISTIEV 445
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E L +PA+ +VA++ D+ WG+RP AFV L + E ++ + R+ Y A
Sbjct: 446 EQALMSHPAVADVAVIGVPDEKWGERPKAFVVLN--PGTAGSTEELVAHVKTRIASYKAP 503
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
+SV ELPKT+TGK +K LR+
Sbjct: 504 RSVEFLVELPKTSTGKTRKNELRD 527
>gi|441514734|ref|ZP_20996549.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
gi|441450492|dbj|GAC54510.1| putative fatty-acid--CoA ligase [Gordonia amicalis NBRC 100051]
Length = 559
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 166/453 (36%), Positives = 237/453 (52%), Gaps = 24/453 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT-----------ILPKPV--- 50
RL + +L HS +K L+ D + A + P + P PV
Sbjct: 110 RLAGPELVYILQHSGAKALYFDAEFRDTVSAIIGQVPEVETVVEIADPEFGVTPGPVADA 169
Query: 51 ----LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
L+ D T++ + W + E +++NYTSGTT PKGV++ HRG ++
Sbjct: 170 GIDGLVSYDDHLTAADDLDPAPIAWTV-DDENAIISINYTSGTTGKPKGVMYTHRGAYLN 228
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+ + +LWTLPMFH NGW W + G T++CLR V I+ I G
Sbjct: 229 SFGETFHNQFTGSSRYLWTLPMFHCNGWCTPWAVTHAGATHVCLRAVRADAIWDAIDDLG 288
Query: 167 VTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
VTH+CGA V + SP L+RP+ I T+GA P V+ E++G V H YGLTE
Sbjct: 289 VTHMCGAPTVCTTIVGSPRAHLLNRPLHITTAGAPPSPTVIGALEAIGVTVVHVYGLTEV 348
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG--MSVKHDGQSQGE 284
G C + W+ L +RA ARQGV + VV PE + V DG++ GE
Sbjct: 349 YGPYTICEHQEAWSALEPADRAAKLARQGVGMVQAETARVVVPEQVPLVDVPADGETMGE 408
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
IV R ++M GY +D + + WF+TGD+GV+H DGY++++DR+KD+IISGGENI
Sbjct: 409 IVLRGNNVMAGYFRDADETRKAFA-GGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENI 467
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
S+ EVE L + A+ +VA++ D+ WG+RP A+V L + T E +IE R L
Sbjct: 468 STIEVEQALVSHDAVVDVAVIGVPDEKWGERPRAYVLL--QPGATLTGEELIEHGRRLLA 525
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
Y + +I DELP+T TGK+ K LR+ A
Sbjct: 526 GYKVPRDIIFADELPRTPTGKVLKGELRDRARA 558
>gi|356540860|ref|XP_003538902.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Glycine max]
Length = 541
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 256/450 (56%), Gaps = 33/450 (7%)
Query: 5 RLDHKRVSVLLHHSE-SKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-------HDDV 56
+LD +++LL E K++FVDYQ AL A + P P+++
Sbjct: 92 QLDVTTLALLLEQLEPCKIMFVDYQLIDSALKACEILSHRKCKP-PIIVLIPNYDQEQSF 150
Query: 57 SATSSP----------TVGHPNFKWVQPESEWDPMALNYTSGTTSS-PKGVVHCHRGLFI 105
A + P +G +F+ ++P +E +P+++NYTSG+T PKGVV+ HR ++
Sbjct: 151 LAKNIPPGTLNYNELIAIGKKDFEALKPNNECNPISVNYTSGSTGILPKGVVYSHRSAYL 210
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+++++ + + PVFLWT+ MF NGW + W M+A+GGTNICLR V IY I +
Sbjct: 211 NSLAAIARFEMKQLPVFLWTVDMFRCNGWCFPWAMSAIGGTNICLRNVSAKGIYDAIYLY 270
Query: 166 GVTHICGALVVLNMLS-SSPS-TKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGL 223
VT CGA +L+M++ +SPS +PL V + +G PP VL + LGF V+ YG+
Sbjct: 271 KVTQFCGAPTLLDMIANASPSDQRPLPHRVNVTVAGVLPPFHVLNKVSQLGFDVNIGYGM 330
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TET G V+ WN +D E +L GV D+DV PETG S HDG++ G
Sbjct: 331 TETLGPVIV----RPWNPNSDGEHTKL--NYGVSEF-RQDVDVKDPETGESTPHDGKTIG 383
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EI+F+ ++MLGYLK+ + + R W+ TGD+ V +G + +KDR+KDVI S GE
Sbjct: 384 EIMFKGNALMLGYLKNSQANDKAFR-GGWYRTGDLAVREPNGSITMKDRAKDVIYSKGEV 442
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL 403
+SS EVE+VL +P + + A+V + D+ + CA V LK S T E II+FC L
Sbjct: 443 VSSLEVEAVLLNHPKVLKAAVVGRCDECLVESLCAIVKLKDGCSA--TVEEIIKFCEDHL 500
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+M +V+ D LP +TGK+QKF +RE
Sbjct: 501 ATHMVPSTVVFGD-LPVNSTGKVQKFRIRE 529
>gi|312141566|ref|YP_004008902.1| acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
gi|311890905|emb|CBH50224.1| putative acyl-CoA ligase/synthetase [Rhodococcus equi 103S]
Length = 533
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 245/444 (55%), Gaps = 20/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ---------SSPLALAALSLFPSNTILPKPVLIHDD 55
RL + +L H+ K+LFVD + + ++ + P +TI P P +
Sbjct: 95 RLAGPELEYILDHAGVKILFVDSELVGSVRTVRENVGSVTEIVEIPDSTI-PYPDVPAGV 153
Query: 56 VSATSSPTVGHPNFKWVQP-----ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+A + + + P + E +A+NYTSGTT PKGV++ HRG ++ ++
Sbjct: 154 ATARYDEYLTNRDGAADAPLHWGVDDEQQVIAINYTSGTTGKPKGVMYSHRGAYLNSLGE 213
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+LWTLPMFH NGW W + A GT++CLR V ++ I G+T++
Sbjct: 214 TFHNGFDGSTKYLWTLPMFHCNGWCTPWAVTAAAGTHVCLRAVRADAVWDAIDDLGITNL 273
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA V ++ + +D ++I T+GA P V+ + E+LG V H YGLTE G
Sbjct: 274 CGAPAVCTTIAGAERAHRVD-ALRITTAGAPPSPTVIGQLEALGITVVHVYGLTEVYGPY 332
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C ++ W+ + ERA L +RQGV + + VV E V DG++ GEIV R
Sbjct: 333 TICEYQQAWDDCSPEERAALISRQGVGMVQAENARVVD-ENMADVPADGETMGEIVLRGN 391
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++MLGY +D + ++ WF+TGD+GV+H DGY+++KDR+KD++ISGGENIS+ EVE
Sbjct: 392 NVMLGYYRDPDATAEAFA-GGWFHTGDLGVMHPDGYIQLKDRAKDIVISGGENISTVEVE 450
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+ +PA+ +VA+V + WG+RP A+V LK T E IIE R+R+ + +
Sbjct: 451 QAIMAHPAVLDVAVVGVPHEKWGERPKAYVILK--KGAAATAEEIIEHTRSRIARFKVPE 508
Query: 411 SVIIEDELPKTATGKIQKFVLREI 434
++ +LP+T TGK+ KF LR +
Sbjct: 509 EIVFPLDLPRTPTGKVLKFELRAL 532
>gi|325677215|ref|ZP_08156881.1| AMP-binding enzyme family protein [Rhodococcus equi ATCC 33707]
gi|325551912|gb|EGD21608.1| AMP-binding enzyme family protein [Rhodococcus equi ATCC 33707]
Length = 533
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/444 (35%), Positives = 245/444 (55%), Gaps = 20/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ---------SSPLALAALSLFPSNTILPKPVLIHDD 55
RL + +L H+ K+LFVD + + ++ + P +T+ P P +
Sbjct: 95 RLAGPELEYILDHAGVKILFVDSELVGSVRTVRENVGSVVEIVEIPDSTV-PYPDVPAGV 153
Query: 56 VSATSSPTVGHPNFKWVQP-----ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+A + + + P + E +A+NYTSGTT PKGV++ HRG ++ ++
Sbjct: 154 ATARYDEFLTNRDGAADAPLHWGVDDEQQVIAINYTSGTTGKPKGVMYSHRGAYLNSLGE 213
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+LWTLPMFH NGW W + A GT++CLR V ++ I G+T++
Sbjct: 214 TFHNGFDGSTKYLWTLPMFHCNGWCTPWAVTAAAGTHVCLRAVRADAVWDAIDDLGITNL 273
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA V ++ S +D ++I T+GA P V+ + E+LG V H YGLTE G
Sbjct: 274 CGAPAVCTTIAGSERAHRVD-ALRITTAGAPPSPTVIGQLEALGITVVHVYGLTEVYGPY 332
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
C ++ W+ + ERA L +RQGV + + VV E V DG++ GEIV R
Sbjct: 333 TICEYQQAWDDCSPEERAALISRQGVGMVQAENARVVD-ENMADVPADGETMGEIVLRGN 391
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++MLGY +D + ++ WF+TGD+GV+H DGY+++KDR+KD++ISGGENIS+ EVE
Sbjct: 392 NVMLGYYRDPDATAEAFA-GGWFHTGDLGVMHPDGYIQLKDRAKDIVISGGENISTVEVE 450
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+ +PA+ +VA+V + WG+RP A+V LK T E IIE R+R+ + +
Sbjct: 451 QAIMAHPAVLDVAVVGVPHEKWGERPKAYVILK--KGAAATAEEIIEHTRSRIARFKVPE 508
Query: 411 SVIIEDELPKTATGKIQKFVLREI 434
++ +LP+T TGK+ KF LR +
Sbjct: 509 EIVFPLDLPRTPTGKVLKFELRAL 532
>gi|404215452|ref|YP_006669647.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
gi|403646251|gb|AFR49491.1| Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Gordonia
sp. KTR9]
Length = 538
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/363 (42%), Positives = 218/363 (60%), Gaps = 8/363 (2%)
Query: 77 EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSY 136
E P+A+NYTSGTT PKGVV+ HRG ++ +S R+ + V LW LPMFH NGWS+
Sbjct: 171 ERGPIAINYTSGTTGKPKGVVYHHRGAYLQALSMAYHARLVPETVHLWVLPMFHCNGWSF 230
Query: 137 SWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKIL 196
W + A GGT++C+RKVD I+ I GVT + A VL L++ +D P+ +
Sbjct: 231 PWAVTAAGGTHVCVRKVDTGTIWEKILDEGVTSMNAAPTVLIDLAAHERAIRVDHPMAVG 290
Query: 197 TSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGV 256
T GA P ++L L V+H YGLTET G V W+ +W+ L TE+A LK+RQG
Sbjct: 291 TGGAPPSPSLLKALADLNISVTHLYGLTETFGPSVLREWQPEWDALPLTEQAVLKSRQGN 350
Query: 257 RTIGLADMDVVHPE---TGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWF 313
++ +A + V P+ + V DGQ+ GE++ R ++ GY D +G+ WF
Sbjct: 351 ASV-VAQLLRVVPDGDPARVDVPPDGQTVGEVLIRGNTVAAGYHDDPDGTRDAF-GGGWF 408
Query: 314 YTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWG 373
TGD+ VVH G +E++DR KDVIISGGENI+S EVE + +PA++EVA+V + WG
Sbjct: 409 RTGDLAVVHPAGEIELRDRRKDVIISGGENIASIEVEQAMSRHPAVSEVAVVGAPHERWG 468
Query: 374 KRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ P AFV+L+ ++ T + +IEF R L Y + ++ D LPKT TGKIQKF LR
Sbjct: 469 EVPVAFVTLR--SGQEVTADELIEFSRTHLAGYKVPRRIVFTD-LPKTGTGKIQKFALRR 525
Query: 434 IVN 436
V
Sbjct: 526 HVQ 528
>gi|111026986|ref|YP_708964.1| AMP-binding acyl-CoA synthetase [Rhodococcus jostii RHA1]
gi|110825525|gb|ABH00806.1| probable AMP-binding acyl-CoA synthetase [Rhodococcus jostii RHA1]
Length = 518
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 166/430 (38%), Positives = 240/430 (55%), Gaps = 14/430 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L HS + LL ++ A A SL I P+L D + +
Sbjct: 92 RLSEPELDYILEHSGATLLVATHE---FADIAGSLAARRNI---PLLQADGSDSAYETEL 145
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
V+ + + +A+NYTSGTT PKGV++ HRG ++ ++ + +LW
Sbjct: 146 VSAEPARVESDDDRTLLAINYTSGTTGRPKGVMYHHRGAYLQALAMTYHMGLGPGSRYLW 205
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLS--S 182
TLPMFH NGW + W + A GGT++CLR VD I+ I+ G TH A VL+M++ +
Sbjct: 206 TLPMFHCNGWCFPWAVTAAGGTHVCLRAVDPSEIWRHIRE-GATHFSAAPTVLSMIAEHA 264
Query: 183 SPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTL 242
+ + P PVK+ T GA P +L R L ++H YG+TET G + W+ +W++L
Sbjct: 265 AAADGPTANPVKVSTGGAPPSPTLLRRMVKLNMQITHLYGMTETFGPAIINLWQPEWDSL 324
Query: 243 ADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEG 302
D A +ARQGV + VV G V+ DGQ+ GE++ +IMLGY +D
Sbjct: 325 GDQAAAEKQARQGVPNVITGGARVVD-SAGKDVEPDGQAIGELIIEGNNIMLGYYRDDAA 383
Query: 303 SSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEV 362
++ D W TGD+ V+H+DGY+EI+DR KDVIISGGENI+S EVE VL +PA+ E
Sbjct: 384 TAAANVDG-WLRTGDLAVMHADGYVEIRDRLKDVIISGGENIASVEVERVLDSHPAVVES 442
Query: 363 ALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTA 422
A+V WG+ P AFV+++ + EE ++EF R L + K +I + LP+T+
Sbjct: 443 AVVGIPHDRWGEVPIAFVTVR--PGTEVHEEELVEFARQHLARFKVPKKIIFAN-LPRTS 499
Query: 423 TGKIQKFVLR 432
TGKIQK VLR
Sbjct: 500 TGKIQKNVLR 509
>gi|374632537|ref|ZP_09704911.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Metallosphaera yellowstonensis MK1]
gi|373526367|gb|EHP71147.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Metallosphaera yellowstonensis MK1]
Length = 554
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 168/448 (37%), Positives = 246/448 (54%), Gaps = 35/448 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDY----QSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
RL K +S +++HSES+ + VD Q P+ + + K VL+ D+ S +
Sbjct: 105 RLSPKEISYIINHSESEFVVVDEPFLDQLRPV---------KDEVKAKIVLLEDESSPSK 155
Query: 61 SP--------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
G P + E E+ + L YTSGTT PKGV+H HRG F+
Sbjct: 156 EEIRKELVWKTYAEFLKEGSPTPLPIPVEDEYSMITLYYTSGTTGLPKGVMHHHRGAFLN 215
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+ ++ ++ V+LWTLPMFH GW + W AVG TN+CL KVD +++ +I+ G
Sbjct: 216 AMGEALEHQMDLNSVYLWTLPMFHAAGWGFPWATVAVGATNVCLDKVDPTVVHKLIEEEG 275
Query: 167 VTHICGA-LVVLNMLSSSPSTK-PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
VTH+ GA V +N++ R V +L +GA+P A L + LG + H YGLT
Sbjct: 276 VTHMSGAPTVYVNLVDYMKRNNLKFSRRVHMLIAGAAPAPATLRAVQELGGYMCHVYGLT 335
Query: 225 ETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGE 284
ET G C W+ +W+ L+ E+A+LKARQGV +G +MDV E V DG++ GE
Sbjct: 336 ETYGPHSICEWRKEWDLLSLEEQAKLKARQGVPYVGF-EMDVFDSED-RPVPWDGKTIGE 393
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
+V R ++ LGY K+ E ++ R N WF +GD VVH DGY+E+ DR KD+I +GGE +
Sbjct: 394 VVMRGHNVALGYYKNPEKTAESFR-NGWFRSGDAAVVHPDGYVEVVDRFKDLINTGGEKV 452
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
SS VE L P + VA+ D+ WG+ A + L + T E +I+FC+ +L
Sbjct: 453 SSIMVEKTLMELPGVKAVAVYGTPDEKWGEVVTARIELM--EGAELTAEEVIKFCKEKLA 510
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLR 432
H+ K ++ +P TATGK+QK++LR
Sbjct: 511 HFECPK-IVEFGPIPTTATGKMQKYILR 537
>gi|213965187|ref|ZP_03393385.1| acyl-CoA synthetase [Corynebacterium amycolatum SK46]
gi|213952301|gb|EEB63685.1| acyl-CoA synthetase [Corynebacterium amycolatum SK46]
Length = 600
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/424 (36%), Positives = 229/424 (54%), Gaps = 32/424 (7%)
Query: 27 YQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYT 86
YQ+ A A S + L DDV PN + + E DP+A+NYT
Sbjct: 182 YQAENTAAATFSQY----------LAGDDVVKRGK---NRPNLPY-SVDDEHDPIAINYT 227
Query: 87 SGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGT 146
SGTT PKGVV+ HRG ++ + + + V+LWTLPMFH +GW W +
Sbjct: 228 SGTTGKPKGVVYTHRGAYLNALGQVQTMHFNHYTVYLWTLPMFHCSGWCTGWAAMSTSAR 287
Query: 147 NICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAV 206
+ +R V P ++ +I GVT +CGA VL L + + + ++I+T+GA P +
Sbjct: 288 QVAIRAVRGPEMWRLIVEEGVTSMCGAPAVLTTLVDDDNKRRVTN-LRIMTAGAPPSPTI 346
Query: 207 LLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDV 266
+ R E++G ++H YGLTE+ G C + W + RA LKARQGV T+ D+ +
Sbjct: 347 ITRCENIGVEITHVYGLTESYGPFTVCESQPDWKDMTVRRRAVLKARQGVATVTNQDVRI 406
Query: 267 VHPETGM-----SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVV 321
V + V +DG + GEI+ +M GY KD E + R WF+TGD+GV+
Sbjct: 407 VEQSDALDAPLIDVPNDGATIGEIIMTGNGVMNGYFKDPEATEHAFR-GGWFHTGDLGVM 465
Query: 322 HSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVS 381
H DGY+++ DR+KDVI+SGGENIS+ EVE + P +++ A++ D WG+RP A+V
Sbjct: 466 HPDGYIQLLDRAKDVIVSGGENISTIEVEQAVVSYPDVSDCAVIGVPDDKWGERPRAYVV 525
Query: 382 LKWELS-----------KKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFV 430
L+ E K E +I CRA + Y + V++ DELP+T+TGK++K
Sbjct: 526 LRPEARCQGTAEEVAEHNKNVAEVVIAHCRAHIAGYKIPRDVVVIDELPRTSTGKVRKNE 585
Query: 431 LREI 434
LR++
Sbjct: 586 LRDL 589
>gi|296083811|emb|CBI24028.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 132/219 (60%), Positives = 165/219 (75%), Gaps = 5/219 (2%)
Query: 221 YGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQ 280
YG+T V QW+ +ERAR+KARQGVRT+ + ++DVV P++G+SVK DG
Sbjct: 229 YGITHMCAAPVP-----QWDRFPASERARVKARQGVRTVVMTEVDVVDPKSGVSVKRDGS 283
Query: 281 SQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISG 340
S GEIV R IMLGYLKD EG+S CM W YTGD+ V+H DGY+EIKDRSKDVIISG
Sbjct: 284 SLGEIVLRGACIMLGYLKDPEGTSKCMSKEGWLYTGDVAVMHPDGYIEIKDRSKDVIISG 343
Query: 341 GENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR 400
GEN+SS EVESVLY +PA+NE A+VA+ D FWG+ PCAFVSLK E KPT + ++E+CR
Sbjct: 344 GENLSSVEVESVLYTHPAVNEAAVVARPDDFWGETPCAFVSLKPESPDKPTAKEMMEYCR 403
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
AR+PHYM K+V+ ++ELPKT+TGKIQKF LR+I A+
Sbjct: 404 ARMPHYMVPKTVVFKEELPKTSTGKIQKFKLRDIAKAMG 442
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 117/171 (68%), Gaps = 28/171 (16%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RLD + VSVLL HSESKL+FVD S L L ALSLFP NT P L+
Sbjct: 97 RLDARTVSVLLRHSESKLVFVDCLSRALILEALSLFPPNTQWP---LL------------ 141
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
WDP+ LNYTSGTTSSPKGVVHCHRG+FI+T+ SL++W +P QPV+LW
Sbjct: 142 -------------WDPIILNYTSGTTSSPKGVVHCHRGIFIVTIDSLVEWSVPKQPVYLW 188
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
TLPMFH NGW+++WGMAA+GGTN+CLRK D IIY I +G+TH+C A V
Sbjct: 189 TLPMFHGNGWTFTWGMAAIGGTNVCLRKFDARIIYDAIPKYGITHMCAAPV 239
>gi|312112088|ref|YP_003990404.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
gi|423720974|ref|ZP_17695156.1| long-chain-fatty-acid--CoA ligase, AMP-dependent [Geobacillus
thermoglucosidans TNO-09.020]
gi|311217189|gb|ADP75793.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y4.1MC1]
gi|383366327|gb|EID43618.1| long-chain-fatty-acid--CoA ligase, AMP-dependent [Geobacillus
thermoglucosidans TNO-09.020]
Length = 530
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/438 (40%), Positives = 251/438 (57%), Gaps = 18/438 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL +L+HSESK+LFVD L + TI K +++H T+
Sbjct: 88 RLKPDDYLFILNHSESKVLFVDQDLYHLIVPIKEKL--QTI--KTIIVHQKDEETNEIAY 143
Query: 64 ----VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
HPN + +P+ E D +L YTSGTT +PKGV+ HR ++ + S+ R+ +
Sbjct: 144 DEWLAQHPNTPFDRPDIDENDVCSLLYTSGTTGNPKGVMLTHRNNYLHALISMHHLRVSD 203
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
+ +L LPMFH NGW + A G T I LRKVD +I+ I+ + V+ + A VLN
Sbjct: 204 EDTYLHILPMFHVNGWGSPFYYTANGATQIGLRKVDAKVIFDYIQTYKVSVMHMAPTVLN 263
Query: 179 ML-SSSPSTKP-LDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
ML KP +D PV+++ +G++PP + + R E LG+ YG+TE++ +
Sbjct: 264 MLLQYYDKHKPVIDHPVRVVIAGSAPPPSFVTRVEQDLGWEFIQVYGMTESSPLNLVSQI 323
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+S L ++ RLKA+ G IG D+ VV E G V HDG++ GE+V RS ++M G
Sbjct: 324 RSHLRDLPQEKQYRLKAKAGYPMIG-CDVRVV-DEHGDEVPHDGKTIGELVIRSNNVMKG 381
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y K+ E + +R N W YTGD+G V GY++I DR KD+IISGGENISS EVE VLY
Sbjct: 382 YWKNPEATMETIR-NGWLYTGDMGTVDEYGYIDIVDRKKDIIISGGENISSIEVEGVLYE 440
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ E A++A + WG+ P AFV ++ + TEE +I F R +L H+ A V
Sbjct: 441 HPAVLEAAVIAAPHEKWGETPHAFVVVR--TGHEVTEEELIAFSREKLAHFKAITGVTFV 498
Query: 416 DELPKTATGKIQKFVLRE 433
DELPKTA+GKIQK LR+
Sbjct: 499 DELPKTASGKIQKVHLRK 516
>gi|288555310|ref|YP_003427245.1| fatty acyl CoA synthase [Bacillus pseudofirmus OF4]
gi|288546470|gb|ADC50353.1| fatty acyl CoA synthase [Bacillus pseudofirmus OF4]
Length = 528
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/443 (40%), Positives = 254/443 (57%), Gaps = 27/443 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH---DDVSATSS 61
RL + +L+HSES++LFVD + PL + + K ++IH +D A S
Sbjct: 88 RLKPEDYLFILNHSESQVLFVDQELYPLVEPVIDKLET----VKHIIIHGAKEDQQAGVS 143
Query: 62 --------PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
PT FK V P E D + YTSGTT +PKGV+ HR ++ +S+
Sbjct: 144 YERWLSQFPT---DEFKRV-PLEENDLANILYTSGTTGNPKGVMLTHRSNYLHALSTQHH 199
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
R+ +Q L LPMFH NGW + A G T + LRK+D I+ I+ +GVT A
Sbjct: 200 LRVSDQDTLLHVLPMFHVNGWGSPFYYTANGATQVMLRKIDPKTIFEKIEKNGVTVAHMA 259
Query: 174 LVVLNMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFV 230
VLNML T+ P ++++ +G++PP A + R E LG+ YG+TE++ V
Sbjct: 260 PTVLNMLLEYAKTENVPKRDNMRVVIAGSAPPPAFVTRVEEELGWEFIQVYGMTESSPLV 319
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+ +S+ + D +ARLKA+ G IG + + VV+ E G V DG+S GEIV RS
Sbjct: 320 TTSQIRSEQLSFDDAAKARLKAKTGYSMIG-SKLKVVN-EYGEKVAADGKSIGEIVVRSN 377
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GY K+ + +S +RD W +TGD+ V GY+EI DR KDVIISGGENISS EVE
Sbjct: 378 GVMEGYWKNPDATSETIRDG-WLHTGDMATVDEHGYMEIVDRKKDVIISGGENISSIEVE 436
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +PA+ E A++A + WG+ P A V L+ + TEE +I+F R+++ H+ A K
Sbjct: 437 GVLYEHPAVLEAAVIAVPHEKWGEVPHAVVVLRE--GHQLTEEEVIQFARSKMAHFKAPK 494
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
SV+ + LPKTA+GKIQK +R+
Sbjct: 495 SVVFAEALPKTASGKIQKVQIRK 517
>gi|378716598|ref|YP_005281487.1| putative acyl-CoA ligase [Gordonia polyisoprenivorans VH2]
gi|375751301|gb|AFA72121.1| putative acyl-CoA ligase [Gordonia polyisoprenivorans VH2]
Length = 566
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/373 (38%), Positives = 210/373 (56%), Gaps = 16/373 (4%)
Query: 74 PESEWDPM-----------ALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
P+ E DP+ +NYTSGTT PKGV++ HRG ++ + + +
Sbjct: 192 PDVEQDPIPWTVDDEDTVITINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGHSRY 251
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSS 182
LWTLPMFH NGW W + T++CLR V ++ I G+TH+CGA V ++
Sbjct: 252 LWTLPMFHCNGWCTPWAVTQASATHVCLRAVRADAVWDAIDDLGITHLCGAPTVCTTIAG 311
Query: 183 SPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTL 242
SP LDRP+ I T+GA P V+ + E+LG V H YGLTE G C ++ W L
Sbjct: 312 SPRAHRLDRPLHITTAGAPPSPTVIGQLEALGITVVHVYGLTEVYGPYTICEFQDAWAEL 371
Query: 243 ADTERARLKARQGVRTIGLADMDVVHPET--GMSVKHDGQSQGEIVFRSGSIMLGYLKDQ 300
RA +RQGV + VV + + V DG++ GEIV R ++M GY +D
Sbjct: 372 PADARAAKLSRQGVGMVQAEAARVVKRDVLPLVDVPADGETMGEIVLRGNNVMAGYFRDP 431
Query: 301 EGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAIN 360
+ WF+TGD+GV+H DGY++++DR+KD+IISGGENIS+ EVE L + ++
Sbjct: 432 AATREAFA-GGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDSVL 490
Query: 361 EVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPK 420
+VA++ D+ WG+RP A+V L + + E +IE R L Y + ++ DELP+
Sbjct: 491 DVAVIGVPDEKWGERPRAYVLLT--PGAQLSAEELIEHARTLLAGYKVPRDIVFADELPR 548
Query: 421 TATGKIQKFVLRE 433
T+TGK+ KF LR+
Sbjct: 549 TSTGKVLKFELRQ 561
>gi|359769363|ref|ZP_09273125.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
gi|359313269|dbj|GAB25958.1| putative fatty-acid--CoA ligase [Gordonia polyisoprenivorans NBRC
16320]
Length = 566
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/373 (38%), Positives = 210/373 (56%), Gaps = 16/373 (4%)
Query: 74 PESEWDPM-----------ALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
P+ E DP+ +NYTSGTT PKGV++ HRG ++ + + +
Sbjct: 192 PDVEQDPIPWTVDDEDTVITINYTSGTTGKPKGVMYTHRGAYLNSFGETFHNQFTGHSRY 251
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSS 182
LWTLPMFH NGW W + T++CLR V ++ I G+TH+CGA V ++
Sbjct: 252 LWTLPMFHCNGWCTPWAVTQASATHVCLRAVRADAVWDAIDDLGITHLCGAPTVCTTIAG 311
Query: 183 SPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTL 242
SP LDRP+ I T+GA P V+ + E+LG V H YGLTE G C ++ W L
Sbjct: 312 SPRAHRLDRPLHITTAGAPPSPTVIGQLEALGITVVHVYGLTEVYGPYTICEFQDAWAEL 371
Query: 243 ADTERARLKARQGVRTIGLADMDVVHPET--GMSVKHDGQSQGEIVFRSGSIMLGYLKDQ 300
RA +RQGV + VV + + V DG++ GEIV R ++M GY +D
Sbjct: 372 PADGRAAKLSRQGVGMVQAEAARVVKRDVLPLVDVPADGETMGEIVLRGNNVMAGYFRDP 431
Query: 301 EGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAIN 360
+ WF+TGD+GV+H DGY++++DR+KD+IISGGENIS+ EVE L + ++
Sbjct: 432 AATREAFA-GGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDSVL 490
Query: 361 EVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPK 420
+VA++ D+ WG+RP A+V L + + E +IE R L Y + ++ DELP+
Sbjct: 491 DVAVIGVPDEKWGERPRAYVLLT--PGAQLSAEELIEHARTLLAGYKVPRDIVFADELPR 548
Query: 421 TATGKIQKFVLRE 433
T+TGK+ KF LR+
Sbjct: 549 TSTGKVLKFELRQ 561
>gi|385679109|ref|ZP_10053037.1| o-succinylbenzoate--CoA ligase [Amycolatopsis sp. ATCC 39116]
Length = 529
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 168/435 (38%), Positives = 243/435 (55%), Gaps = 15/435 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVD---YQSSPLALAALSLFPSNTILPKPV---LIHDDVSA 58
RL + +L HS +K+L VD + S P + + P P + +D++ A
Sbjct: 92 RLAPAEIRYILEHSGAKVLVVDAALHASVPPGTGVDVVTVVDGAEPDPAVGGITYDELLA 151
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
S W + E +++NYTSGTT PKGV + HRG ++ +++ +I
Sbjct: 152 RGS----DEPLPWSVAD-ERSTISINYTSGTTGRPKGVQYHHRGAYLNSLAEIIHSGHTP 206
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
+ +LWTLPMFH NGW +W + A+GGT++CLR VD I+ ++ G+TH+ GA VLN
Sbjct: 207 ESKYLWTLPMFHCNGWCTTWAVTAIGGTHVCLRAVDAAEIWRLLDGEGITHLNGAPTVLN 266
Query: 179 MLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQ 238
+++ PL R V + T+GA P V+ R LG + H YGLTET G C +
Sbjct: 267 TIAAYSGAHPLPREVVVTTAGAPPSPTVIRRMTDLGARLVHVYGLTETYGPYTVCEAQEG 326
Query: 239 WNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLK 298
W L ER+RL ARQGV + + VV E V DG + GE+V R ++M GY
Sbjct: 327 WVKLDIAERSRLMARQGVGMLVTDGIRVVD-EQMRDVPRDGVTMGEVVMRGNNVMSGYFA 385
Query: 299 DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPA 358
D E + R WF++GD+GV H DGY++++DR+KD+I+SGGENIS+ EVE+ L + A
Sbjct: 386 DPEATEKAFR-GGWFHSGDLGVWHPDGYIQLRDRAKDIIVSGGENISTIEVEAALDSHEA 444
Query: 359 INEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDEL 418
+ EVA+V D+ WG+RP A+V L+ T + + R ++ + V D L
Sbjct: 445 VAEVAVVGVPDEKWGERPKAYVVLR--PGATATADDLRAHVREQIARFKVPDQVEFVDAL 502
Query: 419 PKTATGKIQKFVLRE 433
PKT+TGKIQKF LRE
Sbjct: 503 PKTSTGKIQKFQLRE 517
>gi|357020795|ref|ZP_09083026.1| AMP-dependent synthetase and ligase [Mycobacterium
thermoresistibile ATCC 19527]
gi|356478543|gb|EHI11680.1| AMP-dependent synthetase and ligase [Mycobacterium
thermoresistibile ATCC 19527]
Length = 520
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 215/361 (59%), Gaps = 5/361 (1%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHEN 132
Q + E ++LNYTSGTT P+GV++ HRG ++ +++ + Q V LWTLPMFH +
Sbjct: 154 QVDDELALLSLNYTSGTTGRPRGVMYHHRGAYLQALATAYHSGLSPQTVHLWTLPMFHCH 213
Query: 133 GWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRP 192
GWS++W + A GGT++CL KV+ I+ + GV + A VL L+S + +
Sbjct: 214 GWSFTWSVTAAGGTHVCLPKVEPSAIWRHLHDDGVNSLNAAPTVLIDLASHHDARRVAHG 273
Query: 193 VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKA 252
V++ T GA P +L R LGF ++H YGLTET G V C + ++ E+AR KA
Sbjct: 274 VRVGTGGAPPSPTLLQRLSELGFDITHYYGLTETYGPAVICEFPAERADSPMIEQARFKA 333
Query: 253 RQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDW 312
RQG I + VV + G V D + GEIV R ++ GY +D+E + + W
Sbjct: 334 RQGNCNIVGQPLRVVD-DRGDDVPADATTMGEIVIRGNTVATGYYRDEEATREAF-GSGW 391
Query: 313 FYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFW 372
F TGD+GV+H D Y+E++DR+KDVIISGGENISS EVE VL +PA+ E A+VA W
Sbjct: 392 FRTGDLGVMHPDNYVELRDRAKDVIISGGENISSVEVEQVLDTHPAVRECAVVAGPHPRW 451
Query: 373 GKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
G+ P AFV L E T E +I + R RLP + K+V I LPKT TGKIQKF LR
Sbjct: 452 GEVPVAFVDL--EPGANATVEDLIAYARTRLPGFKTPKTVYI-GPLPKTGTGKIQKFRLR 508
Query: 433 E 433
+
Sbjct: 509 D 509
>gi|404257276|ref|ZP_10960603.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
gi|403404270|dbj|GAB99012.1| putative fatty-acid--CoA ligase [Gordonia namibiensis NBRC 108229]
Length = 559
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 161/453 (35%), Positives = 235/453 (51%), Gaps = 24/453 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT-----------ILPKPV--- 50
RL + +L HS +K L+ D + A + P + P PV
Sbjct: 110 RLAGPELVYILDHSGAKALYFDAEFRETVSAIIGQVPEVETVVEIADPEFGVTPGPVADA 169
Query: 51 ----LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
L+ D ++ + W + E +++NYTSGTT PKGV++ HRG ++
Sbjct: 170 GIDGLVSYDDHMAAAEDLDPTPIPWTV-DDENTIISINYTSGTTGKPKGVMYTHRGAYLN 228
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+ + +LWTLPMFH NGW W + G T++CLR V I+ I G
Sbjct: 229 SFGETFHNQFTGSSRYLWTLPMFHCNGWCTPWAVTHAGATHVCLRAVRADAIWDAIDDLG 288
Query: 167 VTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
VTH+CGA V + SP LDRP+ I T+GA P V+ E++G V H YGLTE
Sbjct: 289 VTHMCGAPTVCTTIVGSPRAHRLDRPLHITTAGAPPSPTVIGSLEAIGVTVVHVYGLTEV 348
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG--MSVKHDGQSQGE 284
G C ++ W L +RA +RQGV + VV + + V DG++ GE
Sbjct: 349 YGPYTICEYQDAWGALEPNDRAAKLSRQGVGMVQAETARVVVADQVPLVDVPADGETMGE 408
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
IV R ++M GY +D+E + WF+TGD+GV+H DGY++++DR+KD+IISGGENI
Sbjct: 409 IVLRGNNVMAGYFRDEEETRKAFA-GGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENI 467
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
S+ EVE L + A+ +VA++ D+ WG+RP A+V L + T E ++E R L
Sbjct: 468 STIEVEQALVSHDAVLDVAVIGVADEKWGERPRAYVLL--QPGATLTAEELVEHGRRLLA 525
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
Y + ++ +LP+T TGK+ K LRE A
Sbjct: 526 GYKVPRDIVFAHDLPRTPTGKVLKGELREQARA 558
>gi|386713314|ref|YP_006179637.1| AMP-binding protein [Halobacillus halophilus DSM 2266]
gi|384072870|emb|CCG44361.1| AMP-binding enzyme [Halobacillus halophilus DSM 2266]
Length = 526
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 175/438 (39%), Positives = 250/438 (57%), Gaps = 19/438 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH--DDVSATSS- 61
RL +L HSESK+LFVD L L P + V++H ++ ATS
Sbjct: 88 RLKPADYQFILEHSESKVLFVDADLYHLVETVLPKLPQ----LEHVIVHGGEEEGATSYE 143
Query: 62 ---PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
+ F + E E D +L YTSGTT +PKGV+ HR ++ +S++ R+ +
Sbjct: 144 PWLASFSDELFDRAKLE-ETDIASLLYTSGTTGNPKGVLLSHRANYLHAMSTMHHLRVSD 202
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
Q L LPMFH NGW + A G T + LRK D ++ IK HGV+ + A VLN
Sbjct: 203 QDTLLHVLPMFHVNGWGSPFYYTANGATQVMLRKTDPKLMLEKIKKHGVSVLHMAPTVLN 262
Query: 179 MLSSS-PSTKP-LDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
ML +P +++ V+++ +G++PP A + + E LG+ YG+TE + + +
Sbjct: 263 MLMEEYDEVQPQIEQDVRVVIAGSAPPPAFVRKVEEDLGWKFIQVYGMTEISPLITTSEL 322
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+S L E+ RLKA+ G IG + + VV E G V HDG+S GEI+ R+ IM G
Sbjct: 323 RSMDLDLPAEEKYRLKAKAGYEMIG-SKVRVVD-EFGEEVAHDGKSIGEIITRTNGIMEG 380
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y K++E ++ +RD W YTGD+ VV +EI DR KDVIISGGENISS EVE++LY
Sbjct: 381 YFKNEEATNATIRDG-WLYTGDMAVVDEKHTIEIVDRKKDVIISGGENISSIEVEAILYE 439
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+P++ E A+VA WG+ P A V L+ + +EE +I FCR +L H+ A KS+
Sbjct: 440 HPSVLEAAVVATPHDKWGEVPKAVVVLRE--GETVSEEELIMFCREKLAHFKAPKSITFI 497
Query: 416 DELPKTATGKIQKFVLRE 433
DELPKTA+GKIQK ++R+
Sbjct: 498 DELPKTASGKIQKVIIRK 515
>gi|377558374|ref|ZP_09787975.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
gi|377524449|dbj|GAB33140.1| putative fatty-acid--CoA ligase [Gordonia otitidis NBRC 100426]
Length = 562
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 211/355 (59%), Gaps = 5/355 (1%)
Query: 81 MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGM 140
+++NYTSGTT PKGV++ HRG ++ + + +LWTLPMFH NGW W +
Sbjct: 207 ISINYTSGTTGKPKGVMYTHRGAYLNALGEMHHNHFTGTTRYLWTLPMFHCNGWCTPWAV 266
Query: 141 AAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGA 200
A ++CLR V ++ I GVT++CGA VL ++ SP LD P++I T+GA
Sbjct: 267 TAASAMHVCLRLVRGDAVWDAIDDLGVTNLCGAPTVLITIAGSPRAHRLDAPLRITTAGA 326
Query: 201 SPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIG 260
P V+ +L V H YGLTE+ G C ++ WN L +RA + QGV +
Sbjct: 327 PPSPTVIGALAALDIAVVHVYGLTESYGPYTICEYQEAWNDLDAADRATKLSLQGVGMVQ 386
Query: 261 LADMDVVHPETG--MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDI 318
+ VV T + V DG++ GEIV R +IM GY KD E + + WF+TGD+
Sbjct: 387 AEPVRVVEQGTVPLVDVPADGETIGEIVMRGNNIMAGYFKDPESTRKAF-EGGWFHTGDL 445
Query: 319 GVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCA 378
GV+H DGY++++DR+KD+IISGGENIS+ EVE L + ++ +VA+V D+ WG+RP A
Sbjct: 446 GVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDSVLDVAVVGVPDEKWGERPRA 505
Query: 379 FVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+V LK + T E +I++ R L Y + ++ DELP+T+TGK+ KF LR+
Sbjct: 506 YVLLKE--GQSLTAEELIDYARTLLAGYKIPRDIVFADELPRTSTGKVLKFELRK 558
>gi|336236473|ref|YP_004589089.1| o-succinylbenzoate--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
gi|335363328|gb|AEH49008.1| o-succinylbenzoate--CoA ligase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 530
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/438 (40%), Positives = 251/438 (57%), Gaps = 18/438 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL +L+HSESK+LFVD L + TI K +++H T+
Sbjct: 88 RLKPDDYLFILNHSESKVLFVDQDLYHLIVPIKEKL--QTI--KTIIVHQKDEETNEIAY 143
Query: 64 ----VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
HPN + +P+ E D +L YTSGTT +PKGV+ HR ++ + S+ R+ +
Sbjct: 144 DEWLAQHPNTPFDRPDIDENDVCSLLYTSGTTGNPKGVMLTHRNNYLHALISMHHLRVSD 203
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
+ +L LPMFH NGW + A G T I LRKVD +I+ I+ + V+ + A VLN
Sbjct: 204 EDTYLHILPMFHVNGWGSPFYYTANGATQIGLRKVDAKVIFDYIQTYKVSVMHMAPTVLN 263
Query: 179 ML-SSSPSTKP-LDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
ML KP +D PV+++ +G++PP + + R E LG+ YG+TE++ +
Sbjct: 264 MLLQYYDKHKPVIDHPVRVVIAGSAPPPSFVTRVEQDLGWEFIQVYGMTESSPLNLVSQI 323
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+S L ++ RLKA+ G IG D+ VV E G V HDG++ GE+V RS ++M G
Sbjct: 324 RSHLRDLPREKQYRLKAKAGYPMIG-CDVRVV-DEHGDEVPHDGKTIGELVIRSNNVMKG 381
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y K+ E + +R N W YTGD+G V GY++I DR KD+IISGGENISS EVE VLY
Sbjct: 382 YWKNPEATMETIR-NGWLYTGDMGTVDEYGYIDIVDRKKDIIISGGENISSIEVEGVLYE 440
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ E A++A + WG+ P AFV ++ + TEE +I F R +L H+ A V
Sbjct: 441 HPAVLEAAVIAAPHEKWGETPHAFVVVR--PGHEVTEEELIAFSREKLAHFKAITGVTFV 498
Query: 416 DELPKTATGKIQKFVLRE 433
DELPKTA+GKIQK LR+
Sbjct: 499 DELPKTASGKIQKVHLRK 516
>gi|226357306|ref|YP_002787046.1| o-succinylbenzoate--CoA ligase [Deinococcus deserti VCD115]
gi|226319296|gb|ACO47292.1| putative o-succinylbenzoate--CoA ligase; putative [Deinococcus
deserti VCD115]
Length = 522
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 209/358 (58%), Gaps = 4/358 (1%)
Query: 75 ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGW 134
+ E D + +N+TSGTTSSPKGV+ HR + +L +++ + V+L TLP FH NGW
Sbjct: 157 QDEDDTITINFTSGTTSSPKGVMLTHRNTLLNAAETLYYFKLDSDSVYLHTLPDFHANGW 216
Query: 135 SYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVK 194
W VG T++ L V Y I +GVTH+C A VL+ML+ + + R V+
Sbjct: 217 GGVWSPFGVGATHVTLPAVRAEAAYDAIDRYGVTHLCAAPTVLSMLTDPAQARRVSRSVR 276
Query: 195 ILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQ 254
+ T+G+ P A + LGF V+ YGLTE + + + L +RA L ARQ
Sbjct: 277 VATAGSPPHARTIADMNDLGFHVTQVYGLTEVSPLITVAELSAAQEALPTAQRAPLIARQ 336
Query: 255 GVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFY 314
G + ++DV+ E V HDG + GEI+ R +M GY ++ E ++ ++ WF+
Sbjct: 337 GYEMLLAGEVDVLD-EHLQPVPHDGVALGEIMVRGNLVMKGYYRNPEATAEALK-GGWFH 394
Query: 315 TGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGK 374
TGD+ V + DG +EI+DR+KDVIISGGENISS EVE VLY +PA+ E +VA + WG+
Sbjct: 395 TGDVAVTYPDGRMEIRDRNKDVIISGGENISSVEVEGVLYAHPAVREAVVVAMPHEQWGE 454
Query: 375 RPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
PCAFV+L ++ T E + RA L + A K DELPKTA+GK QKF+LR
Sbjct: 455 VPCAFVALHQ--GQQVTPEDLNAHVRAHLAGFKAPKHYEFRDELPKTASGKFQKFILR 510
>gi|409388305|ref|ZP_11240282.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
gi|403201379|dbj|GAB83516.1| putative fatty-acid--CoA ligase [Gordonia rubripertincta NBRC
101908]
Length = 566
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 163/454 (35%), Positives = 238/454 (52%), Gaps = 26/454 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT-----------ILPKPV--- 50
RL + +L HS +K+L+ D + A + P + P PV
Sbjct: 117 RLAGPELVYILEHSGAKVLYFDAEFRDTVAAIIGQVPEVETVVEIADPEFGVTPGPVSDA 176
Query: 51 -----LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
+ +DD AT+ P W + E +++NYTSGTT PKGV++ HRG ++
Sbjct: 177 GIDGLVSYDDHLATADGLDPAP-IPWTVGD-ENAIISINYTSGTTGKPKGVMYTHRGAYL 234
Query: 106 ITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHH 165
+ + +LWTLPMFH NGW W + G T++CLR V I+ I
Sbjct: 235 NSFGETFHNQFTGSSRYLWTLPMFHCNGWCTPWAVTHAGATHVCLRAVRADAIWDAIDDL 294
Query: 166 GVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
GVTH+CGA V + SP LDRP+ I T+GA P V+ E++G V H YGLTE
Sbjct: 295 GVTHMCGAPTVCTTIVGSPRAHRLDRPLHITTAGAPPSPTVIGALEAIGVTVVHVYGLTE 354
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG--MSVKHDGQSQG 283
G C ++ W+ L +RA +RQGV + VV + + V DG++ G
Sbjct: 355 VYGPYTICEYQDAWSALEPGDRAAKLSRQGVGMVQAETARVVVADQVPLVDVPADGETMG 414
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R ++M GY +D++ + WF+TGD+GV+H DGY++++DR+KD+IISGGEN
Sbjct: 415 EIVLRGNNVMAGYFRDEDETRKAFA-GGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGEN 473
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL 403
IS+ EVE L + A+ +VA++ D+ WG+RP A+V L + T E +IE R L
Sbjct: 474 ISTIEVEQALVSHDAVVDVAVIGVEDEKWGERPRAYVLL--QPGATLTGEELIEHGRRLL 531
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
Y + ++ +LP+T TGK+ K LR A
Sbjct: 532 AGYKVPRDIVFAHDLPRTPTGKVLKGELRAQARA 565
>gi|392953268|ref|ZP_10318822.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
gi|391858783|gb|EIT69312.1| AMP-dependent synthetase and ligase [Hydrocarboniphaga effusa
AP103]
Length = 523
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 163/378 (43%), Positives = 236/378 (62%), Gaps = 16/378 (4%)
Query: 60 SSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQ 119
SSP +F+ V+ + E D +++NYTSGTT+ PKGV+ HR ++ ++++++ +P
Sbjct: 148 SSPA----DFERVEIQ-ETDLLSINYTSGTTARPKGVMITHRNAWMNSIATMV--HVPMT 200
Query: 120 PV--FLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
P +LWTLPMFH NGW+++W + A GG ++CLRKVD IY + + ++ +C A VL
Sbjct: 201 PAERYLWTLPMFHANGWTFTWTVTAAGGAHVCLRKVDALQIYRLCEVERISMLCAAPTVL 260
Query: 178 NMLSSSPSTK--PLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCA 234
+++ P+ + + + V++LT+GA P AA + E LG+ ++ YGLTET F+ C
Sbjct: 261 ISIANGPAEERARVKKGVRVLTAGAPPAAATIETMEQELGWTITQVYGLTETTPFIAICE 320
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+ L ERA +KARQGV IG A++ VV E V HDG++ GEIV R +M
Sbjct: 321 AVPEHVGLGVRERAVIKARQGVELIGAAELRVVD-EAMNDVPHDGETMGEIVARGNVVMK 379
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GY +++E + WF+TGD V+H DGY+EI+DR KDVIISGGENISS EVESVL
Sbjct: 380 GYYQNEEATEKAF-AGGWFHTGDAAVIHPDGYVEIRDRFKDVIISGGENISSIEVESVLL 438
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ EVA+V WG+ P AFV L+ + TE+ ++ + R + + A +
Sbjct: 439 RHPAVLEVAVVGMPHPKWGESPNAFVVLR--AGAQATEDELMAYARDNMARFKAPSKFHL 496
Query: 415 EDELPKTATGKIQKFVLR 432
ELPKTATGKIQKF LR
Sbjct: 497 IAELPKTATGKIQKFQLR 514
>gi|343925971|ref|ZP_08765486.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
gi|343764322|dbj|GAA12412.1| putative fatty-acid--CoA ligase [Gordonia alkanivorans NBRC 16433]
Length = 559
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 162/453 (35%), Positives = 234/453 (51%), Gaps = 24/453 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNT-----------ILPKPV--- 50
RL + +L HS +K L+ D + A + P + P PV
Sbjct: 110 RLAGPELVYILEHSGAKALYFDAEFRDTVAAIIGQVPEVETVVEIADPEFGVTPGPVSDA 169
Query: 51 ----LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
L+ D S+ + W + E +++NYTSGTT PKGV++ HRG ++
Sbjct: 170 GIDGLVSYDDHLASADDLDATPIPWTV-DDENAIISINYTSGTTGKPKGVMYTHRGAYLN 228
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+ + +LWTLPMFH NGW W + G T++CLR V I+ I G
Sbjct: 229 SFGETFHNQFTGSSRYLWTLPMFHCNGWCTPWAVTHAGATHVCLRAVRADAIWDAIDDLG 288
Query: 167 VTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
VTH+CGA V + SP LDRP+ I T+GA P V+ E++G V H YGLTE
Sbjct: 289 VTHMCGAPTVCTTIVGSPRAHRLDRPLHITTAGAPPSPTVIGSLEAIGVTVVHVYGLTEV 348
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG--MSVKHDGQSQGE 284
G C ++ W+ L +RA +RQGV + VV + + V DG++ GE
Sbjct: 349 YGPYTICEYQDAWSALEPGDRAAKLSRQGVGMVQAETARVVVADQVPLVDVPADGETMGE 408
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
IV R ++M GY +D++ + WF+TGD+GV+H DGY++++DR+KD+IISGGENI
Sbjct: 409 IVLRGNNVMAGYFRDEDETRKAFA-GGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENI 467
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
S+ EVE L + A+ +VA++ D+ WG+RP A+V L T E +IE R L
Sbjct: 468 STIEVEQALVSHDAVVDVAVIGVEDEKWGERPRAYVLL--HPGATLTGEELIEHGRRLLA 525
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
Y + ++ ELP+T TGK+ K LR A
Sbjct: 526 GYKVPRDIVFAHELPRTPTGKVLKGELRAQARA 558
>gi|326383602|ref|ZP_08205288.1| AMP-binding enzyme family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326197686|gb|EGD54874.1| AMP-binding enzyme family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 531
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 215/363 (59%), Gaps = 7/363 (1%)
Query: 74 PESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENG 133
P+ E P+A+N+TSGTT+ PKG V+ HRG ++ +S ++ + +LWTLPMFH +G
Sbjct: 168 PDDERAPLAINFTSGTTAGPKGAVYTHRGCYLNAMSQVVAMNLRADSTYLWTLPMFHCSG 227
Query: 134 WSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML--SSSPSTKPLDR 191
W ++W + AVG ++ LRKVD + +I + VTH+CGA VVLN L +S T L
Sbjct: 228 WCFTWAVTAVGARHVALRKVDPDRVLDLIGRYDVTHLCGAPVVLNGLVEASRRRTAELGA 287
Query: 192 PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLK 251
V GA P A + +G + H YG+TET G + C + +W L + AR
Sbjct: 288 EVTFAVGGAPPTPAAIAEMREIGVEIVHLYGMTETYGPSLVCELRPEWAELDASALARKV 347
Query: 252 ARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDND 311
+RQGVRT+ + VV + V DG++ GE+ RS +++ YL D E ++
Sbjct: 348 SRQGVRTLSVESARVVTGDL-RDVPADGETPGELAIRSNTVISHYLDDLEATARAFA-GG 405
Query: 312 WFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKF 371
W +TGD V H DGY+EI+DR KDVIISGGENISS EVE+ L +PA+ E A+VA+
Sbjct: 406 WLHTGDAAVRHPDGYIEIRDRIKDVIISGGENISSIEVENALADHPAVRESAVVARAHPK 465
Query: 372 WGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVL 431
WG+ P A V+L+ ++ +I++ R R+ H+ +++ ELPKTATGKIQK L
Sbjct: 466 WGEVPVAHVALR--DGAVVSDHELIDWLRDRIAHFKVPAAIVF-GELPKTATGKIQKSEL 522
Query: 432 REI 434
R I
Sbjct: 523 RAI 525
>gi|441507103|ref|ZP_20989029.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
gi|441448179|dbj|GAC46990.1| putative fatty-acid--CoA ligase [Gordonia aichiensis NBRC 108223]
Length = 562
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 212/357 (59%), Gaps = 9/357 (2%)
Query: 81 MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGM 140
++LNYTSGTT PKGV++ HRG ++ + + + +LWTLPMFH NGW W +
Sbjct: 207 ISLNYTSGTTGKPKGVMYTHRGAYLNALGEMHHNQFTGSTRYLWTLPMFHCNGWCTPWAV 266
Query: 141 AAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGA 200
A ++CLR+V ++ I GVT++CGA VL ++ SP LD P++I T+GA
Sbjct: 267 TAASAMHVCLRQVRADAVWDAIDDLGVTNLCGAPTVLITIAGSPRAHRLDTPLRITTAGA 326
Query: 201 SPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIG 260
P V+ +L V H YGLTE+ G C ++ W+ L +RA + QGV +
Sbjct: 327 PPSPTVIAALGALDIAVVHVYGLTESYGPYTICEYQEAWDDLDPADRAAKLSLQGVGMVQ 386
Query: 261 LADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTG 316
VV E G + V DG + GEIV R +IM GY KD + + + WF+TG
Sbjct: 387 AEPARVV--ERGVVPLVDVPADGTTIGEIVLRGNNIMAGYFKDPDATREAF-EGGWFHTG 443
Query: 317 DIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRP 376
D+GV+HSDGY++++DR+KD+IISGGENIS+ EVE L + A+ +VA+V D+ WG+R
Sbjct: 444 DLGVMHSDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDAVLDVAVVGVPDEKWGERA 503
Query: 377 CAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
A+V LK + + + +I++ R L Y + ++ DELP+T+TGK+ KF LR+
Sbjct: 504 RAYVLLK--DGRSLSSDELIDYARTLLAGYKIPRDIVFADELPRTSTGKVLKFELRK 558
>gi|443672304|ref|ZP_21137393.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
gi|443415167|emb|CCQ15731.1| Tyrocidine synthase 3 [Rhodococcus sp. AW25M09]
Length = 531
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 218/364 (59%), Gaps = 9/364 (2%)
Query: 75 ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGW 134
+ E + +NYTSGTT PKGV++ HRG ++ ++ L +LWTLPMFH NGW
Sbjct: 160 DDETSTITINYTSGTTGRPKGVMYTHRGAYLNSLGELHHQGFGIDTRYLWTLPMFHCNGW 219
Query: 135 SYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVK 194
+W + A GT++CLR V I++ I + GV H+ GA VL L+++ LDRP+
Sbjct: 220 CTTWAVTAASGTHVCLRGVRGDAIWTAIDN-GVDHLAGAPTVLTTLATAAEAHSLDRPLT 278
Query: 195 ILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQ 254
I+T+GA P ++ + +LG + H YGLTET G C K +W L E+AR ARQ
Sbjct: 279 IVTAGAPPSPTIITKIRALGATLVHVYGLTETYGPYSVCEAKQEWLELDADEQARRLARQ 338
Query: 255 GVRTIGLADMDVVH--PETG---MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRD 309
GV + + VV P+TG + V+ DG GEIV R ++M GY D G++
Sbjct: 339 GVGMLTADRLRVVRDKPDTGGALIDVEPDGVEMGEIVMRGNNVMKGYYNDASGTTKAFAG 398
Query: 310 NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRD 369
WF++GD+GV+H DGY+++ DR+KDV+ISGGENIS+ EVE L +PA+ +VA++ D
Sbjct: 399 G-WFHSGDLGVMHPDGYVQLLDRAKDVVISGGENISTIEVEQALASHPAVADVAVIGVPD 457
Query: 370 KFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKF 429
WG+RP A+V L + +E ++ ++ + Y A ++V ELPKT+TGKI+K
Sbjct: 458 DKWGERPKAYVVLV--PGAQASEADLLAHVKSAIASYKAPRAVEFIVELPKTSTGKIRKK 515
Query: 430 VLRE 433
LR+
Sbjct: 516 ELRD 519
>gi|357484059|ref|XP_003612316.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
gi|355513651|gb|AES95274.1| 2-succinylbenzoate-CoA ligase [Medicago truncatula]
Length = 550
Score = 275 bits (703), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 251/450 (55%), Gaps = 22/450 (4%)
Query: 5 RLDHKRVSVLLHHSES-KLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD----VSAT 59
+LD ++++L ES K++FVDY+ L A + P +++ D V
Sbjct: 100 KLDATTLALILEQLESCKIIFVDYEFIDSVLKASKIISQRNFKPPLIVLIQDHGQLVKDI 159
Query: 60 SSPTV--------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
T+ G +FK P +E DP+++NYTSG+T PKG V+ HR +++ +++++
Sbjct: 160 PQDTLIYHELLEKGQKDFKISMPINECDPISVNYTSGSTGIPKGAVYSHRSVYLNSLATI 219
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLR-KVDVPIIYSVIKHHGVTHI 170
+ + PVFLWT+ MF NGW + W M A+GGTNICLR I I H VTH+
Sbjct: 220 TRFDVNPMPVFLWTVDMFRCNGWCFIWLMPALGGTNICLRNNFSAKDIIDAIHVHKVTHL 279
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA +L ++++ +P V + +G P +L + LGF V+ YG+TET G V
Sbjct: 280 CGAPTLLEIIANCEIIRPFSHKVSVTVAGILPSFKILNKVAELGFDVNIGYGMTETLGPV 339
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+ WK ++ D + ++GV + ++DV P T SV +DG++ GEI+F+
Sbjct: 340 IVRKWKQNFDD--DITKLNYVDKKGVIDFMMVEVDVKDPNTMKSVPYDGKTIGEIMFKGN 397
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+ M GYLK + S RD W+ T D+GV +G +KDR+KD+I S GE +SS EVE
Sbjct: 398 TSMSGYLKSSQVSHEAFRDG-WYRTRDLGVRLPNGSFNLKDRAKDIIYSKGEFVSSLEVE 456
Query: 351 SVLYMNPAINEVALVAQ--RDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
+VL +P + +VA+V + D+ + PCA V LK + E II+FC +L +M
Sbjct: 457 AVLLNHPMVLKVAVVGRYDDDECLVESPCAIVKLKDGCNANI--EDIIKFCEDQLDAHMV 514
Query: 409 HKSVIIEDELPKTATGKIQKFVLREIVNAV 438
KSV+ D LP +TGK+QKFV+RE + ++
Sbjct: 515 PKSVVFVD-LPLNSTGKVQKFVIRENIKSI 543
>gi|357590802|ref|ZP_09129468.1| acyl-CoA synthetase [Corynebacterium nuruki S6-4]
Length = 586
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 170/466 (36%), Positives = 241/466 (51%), Gaps = 42/466 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL V + H+ ++LF + L LA S ++ VLIHD + P
Sbjct: 111 RLAPAEVRYICDHAGIRILFGEQD---LILACRRTLASAGLVETFVLIHDGDGSQPQPRH 167
Query: 63 -------TV-----------GHPNFKWVQP---ESEWDPMALNYTSGTTSSPKGVVHCHR 101
TV G P+ P + E P+A+NYTSGTT PKGVV+ HR
Sbjct: 168 PDGGVVTTVDDFLAEGVHHEGEPDDDTTFPFAVDDETSPIAINYTSGTTGRPKGVVYTHR 227
Query: 102 GLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSV 161
G ++ + + V+LWTLPMFH +GW W AV T I LR V P ++ +
Sbjct: 228 GAYLNALGEVTTQNFSRDTVYLWTLPMFHCSGWCTGWASMAVAATQIALRAVRGPEMWKL 287
Query: 162 IKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSY 221
I GVT +CGA VL L + + + ++T+GA P ++ + E LG VV+H Y
Sbjct: 288 IDDEGVTSLCGAPAVLTTLVGDDAAHRAEG-LSVVTAGAPPSPTIIEQCEELGIVVTHVY 346
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP--------ETGM 273
GLTE+ G C + +W L RA+LKARQGV I AD VV T +
Sbjct: 347 GLTESYGPYTLCEPQPEWAGLPVAARAKLKARQGVPMITSADARVVEAVPVGAPADTTLV 406
Query: 274 SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRS 333
V DG++ GEIV +M Y + + ++ WF+TGD+ V H+DGY++I DRS
Sbjct: 407 DVPSDGETMGEIVLGGNGVMKEYFHNPDATAEAFV-GGWFHTGDLAVKHADGYIQILDRS 465
Query: 334 KDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT-- 391
KDV+ISGGENIS+ EVE + +PAI +VA+V D WG+R A+V L +
Sbjct: 466 KDVVISGGENISTIEVEQAVISHPAIADVAVVGAPDDRWGERLRAYVVLDPSVDATAAVP 525
Query: 392 ----EEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
E+++I+ CR + Y + + DELP+T+TGK++K VLR+
Sbjct: 526 GGEVEQSVIDHCRGLIAGYKVPRDYRVIDELPRTSTGKVRKNVLRD 571
>gi|392567139|gb|EIW60314.1| acetyl-CoA synthetase-like protein [Trametes versicolor FP-101664
SS1]
Length = 586
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/461 (36%), Positives = 243/461 (52%), Gaps = 43/461 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL V +L HS S+L+ VD++ +PL A PV++ +D P
Sbjct: 136 RLTPGEVDYILEHSGSRLILVDHEYTPLVKGAKV----------PVVVINDTGREDDPYE 185
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P +W + E AL YTSGTT PKGV+ RG ++ +++
Sbjct: 186 QFLSAGRKFSGERGWPGLEWERDED--SACALCYTSGTTGRPKGVITTLRGSYLAAMANA 243
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ + ++ +LW LPMFH +GW++ W + I LR V P+I++ + GVTH C
Sbjct: 244 YETGMTHESTYLWILPMFHASGWTFPWTITFAAAAQITLRSVSYPLIWNHLLKSGVTHYC 303
Query: 172 GALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE---TAG 228
GA V L ++P + LD+PV + +G++P A ++ E + H YGLTE T G
Sbjct: 304 GAPTVQIGLINAPQARRLDKPVYAVIAGSAPTAHLIGELEKINIKPVHVYGLTEVSNTYG 363
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP-ETGMS-------VKHDGQ 280
C ++ W +L+ ERA+L ARQG D VV E G S V DG+
Sbjct: 364 PSTKCYYQPHWTSLSLEERAKLLARQGHSFATAMDARVVFQLEDGESADAPLRDVPKDGK 423
Query: 281 SQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISG 340
+ GE+VFR +M Y D E + R +F TGD+ V H DGY+ ++DRSKD+IISG
Sbjct: 424 TMGEVVFRGNIVMKEYFNDPEATRKAFR-GGYFNTGDLAVWHPDGYIAVQDRSKDIIISG 482
Query: 341 GENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL------KWELSKKPTEEA 394
GEN SS +E L +P + EV++VA+ WG+RP AFV L KW+ E+
Sbjct: 483 GENASSLAIEQELASHPDVLEVSVVARAHPKWGERPMAFVILHPQKAAKWKGRHAEFEQD 542
Query: 395 IIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIV 435
+ + R+RLP + + V + DELPKT+TGKIQK LR++V
Sbjct: 543 LKKHARSRLPGFACPEWVSVVDELPKTSTGKIQKVQLRKLV 583
>gi|441522619|ref|ZP_21004263.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
gi|441457802|dbj|GAC62224.1| putative fatty-acid--CoA ligase [Gordonia sihwensis NBRC 108236]
Length = 542
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 249/449 (55%), Gaps = 28/449 (6%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPL--ALAALSLFPSNTILPKPV--------- 50
V RL V + +HS ++LL D +P ALA + ++ P
Sbjct: 93 VNTRLAPAEVRYICNHSGARLLVGD---APFLEALAGVEFETVREVVETPSVDGEYTGAG 149
Query: 51 -LIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
L +D+++A S W + + E +++NYTSGTT PKGV++ HRG ++ ++
Sbjct: 150 DLRYDELTARGSDN----PIPW-EVDDENSLISINYTSGTTGEPKGVMYTHRGAYLASLG 204
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+++ +LWTLPMFH NGW W + AV GT++CLR V ++ +I VT
Sbjct: 205 NVLTQGFGIDTRYLWTLPMFHCNGWCGPWSVTAVAGTHVCLRAVRGDDMWRLIDTELVTQ 264
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
+ GA VL L+++ +DRP+ I T+GA P ++ +LG + H YGLTET G
Sbjct: 265 MSGAPTVLTTLATAGEAHRMDRPLTIATAGAPPSPTIIRAIRNLGIELVHVYGLTETYGP 324
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE-----TGMSVKHDGQSQGE 284
C + W++L+ E A ARQGV I + VV PE T + V+ DG GE
Sbjct: 325 YSVCEPSASWSSLSGEELAVRMARQGVGMITADRLRVVLPEPAEDGTLVDVEPDGVMMGE 384
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
IV R +M GY +D E ++ WF++GD+GV+H DGY+++ DR+KDVIISGGENI
Sbjct: 385 IVMRGNVVMKGYFEDPERTAEAFA-GGWFHSGDLGVMHPDGYVQLLDRAKDVIISGGENI 443
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
S+ EVE + +PAI +VA+V D WG+RP A+ K ++ TE +I ++R+
Sbjct: 444 STIEVEQAVVSHPAIVDVAVVGVPDDKWGERPKAYAVRK--PGEQLTEAEVIAHVKSRIA 501
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y A + V D+LPKT+TGKI+K LR+
Sbjct: 502 GYKAPREVEFVDDLPKTSTGKIRKNELRD 530
>gi|377564146|ref|ZP_09793471.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
gi|377528635|dbj|GAB38636.1| putative fatty-acid--CoA ligase [Gordonia sputi NBRC 100414]
Length = 561
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 210/357 (58%), Gaps = 9/357 (2%)
Query: 81 MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGM 140
+++NYTSGTT PKGV++ HRG ++ + + + +LWTLPMFH NGW W +
Sbjct: 206 ISINYTSGTTGKPKGVMYTHRGAYLNALGEMHHNQFTGSTRYLWTLPMFHCNGWCTPWAV 265
Query: 141 AAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGA 200
A ++CLR V ++ I GVT++CGA VL ++ SP LD P++I T+GA
Sbjct: 266 TAASAMHVCLRLVRADAVWDAIDDLGVTNLCGAPTVLITIAGSPRAHRLDAPLRITTAGA 325
Query: 201 SPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIG 260
P V+ +L V H YGLTE+ G C ++ W+ L +RA + QGV +
Sbjct: 326 PPSPTVIAALAALDISVVHVYGLTESYGPYTICEYQESWDDLDPADRAAKLSLQGVGMVQ 385
Query: 261 LADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTG 316
VV E G + V DG + GEIV R +IM GY KD + + + WF+TG
Sbjct: 386 AEPARVV--ERGVVPLVDVPADGSTIGEIVLRGNNIMAGYFKDPDATRQAF-EGGWFHTG 442
Query: 317 DIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRP 376
D+GV+H DGY++++DR+KD+IISGGENIS+ EVE L + A+ +VA+V D+ WG+R
Sbjct: 443 DLGVMHPDGYIQLRDRAKDIIISGGENISTIEVEQALVSHDAVLDVAVVGVPDEKWGERA 502
Query: 377 CAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
A+V LK + + + +IE+ R L Y + ++ DELP+T+TGK+ KF LR+
Sbjct: 503 RAYVLLKE--GRSLSSDELIEYARTLLAGYKIPRDIVFADELPRTSTGKVLKFELRK 557
>gi|409358188|ref|ZP_11236551.1| acyl-CoA synthetase [Dietzia alimentaria 72]
Length = 543
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/359 (38%), Positives = 213/359 (59%), Gaps = 11/359 (3%)
Query: 81 MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGM 140
+A+NYTSGTT PKGV++ HRG ++ + +I + +LWTLPMFH NGW +W M
Sbjct: 179 IAVNYTSGTTGRPKGVMYTHRGAYLNALGEIITQNLDADSNYLWTLPMFHCNGWCTTWAM 238
Query: 141 AAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGA 200
GT++CLR V I+ + GV + GA VL+ ++ P+ +P+ + + ++T+GA
Sbjct: 239 TGARGTHVCLRAVRGDEIWRLFDAEGVNRLAGAPAVLSTIADDPAARPV-KGISMVTAGA 297
Query: 201 SPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIG 260
P +L R E LG V+ YGLTET G C + +W+ L ERA LK+RQGV I
Sbjct: 298 PPSPTILRRFEDLGIEVTQVYGLTETYGPFTVCTPQPRWHELDPDERAALKSRQGVAMIH 357
Query: 261 LADMDVVHPETGMSVKH------DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFY 314
+ VV T KH DG + GE+V +M GY +D E + + WF+
Sbjct: 358 ADTVRVVE-RTSPGEKHLVDVPADGVTMGEVVMTGNGVMKGYFEDAEATKVAFA-GGWFH 415
Query: 315 TGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGK 374
+GD+GV+H DGY+++ DR+KDV++SGGENIS+ EVE + +P + + A+V+ D+ WG+
Sbjct: 416 SGDLGVMHPDGYIQLLDRAKDVVVSGGENISTIEVEQAIASHPDVVDCAVVSMPDEKWGE 475
Query: 375 RPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
RP A+V ++ E +IE CR ++ Y +V + + LP+T+TGK++K LR+
Sbjct: 476 RPKAYVVVR--PGSDLDETGVIEHCRTKIARYKVPGAVELTEALPRTSTGKVRKNELRD 532
>gi|259418997|ref|ZP_05742914.1| AMP-dependent synthetase and ligase [Silicibacter sp. TrichCH4B]
gi|259345219|gb|EEW57073.1| AMP-dependent synthetase and ligase [Silicibacter sp. TrichCH4B]
Length = 525
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 173/450 (38%), Positives = 242/450 (53%), Gaps = 46/450 (10%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQS----------------SPLALAALSLFPSNT 44
V RL V+ + HS +LL D Q+ +P A L LF +T
Sbjct: 96 TVNTRLTADEVAYIADHSGCRLLIGDAQTLTTLDRVTVPMTQLCTAPGAGDGLDLF--DT 153
Query: 45 ILPKPVLIHDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
LP+ LI P +E D +ALNYTSGTT PKGV++ HRG +
Sbjct: 154 SLPEVTLI-------------------TSPLAETDAIALNYTSGTTGQPKGVIYTHRGAY 194
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
+ + ++ I + +LWTLPMFH GW+++W + A GG ++CL +++ ++ +I
Sbjct: 195 LNALGNVASLGISDGTRYLWTLPMFHCYGWTHTWAVTAAGGLHVCLDRIEPRVMIDLIAR 254
Query: 165 HGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLT 224
H VTH+C VVL ML +P PVK+ T GA+P A+L R LGF + H YGLT
Sbjct: 255 HEVTHLCCPPVVLYMLLEK-MKEPAPCPVKVGTGGAAPTPALLSRMAELGFDIVHLYGLT 313
Query: 225 ETAGFV-VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
E+ G V ++ S +AD RAR AR G+R + V+ PE G V DG++ G
Sbjct: 314 ESYGPVTLNDPDFSAGTPIAD--RARRMARHGLRHHTTGSVQVLDPE-GQPVPQDGETTG 370
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EI ++M GY +D + + + F TGD+ V H DG +EI+DR+KD+IISGGEN
Sbjct: 371 EIALSGNTVMAGYYRDPKATEAAL-GGGVFRTGDLAVWHPDGEIEIQDRAKDIIISGGEN 429
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL 403
SS EVE++L+ +P I A+VA WG+ AFV LK + P E + +FCR L
Sbjct: 430 FSSLEVEAILHQHPDILLAAVVAAPHPKWGETAWAFVELKSGCT--PCTETLDDFCREHL 487
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + I+ LPKTATGK+QKF LRE
Sbjct: 488 AGFKRPRRFIL-GPLPKTATGKVQKFTLRE 516
>gi|359772624|ref|ZP_09276047.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
gi|359310253|dbj|GAB18825.1| putative fatty-acid--CoA ligase [Gordonia effusa NBRC 100432]
Length = 555
Score = 271 bits (694), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 238/449 (53%), Gaps = 27/449 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDV--SATSSP 62
RL ++ +L+H+E L D + + PS L V I DD S ++P
Sbjct: 109 RLAGPELAYILNHAEVTTLLFDAEFGDTVAQIVDHVPS---LATTVEIIDDQFGSDRTAP 165
Query: 63 TV----GHPNF------------KWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
TV G+ F W + E +A+NYTSGTT PKGV++ HRG ++
Sbjct: 166 TVPGVVGYDEFLTRADDLDSTRLPWTV-DDENQIIAINYTSGTTGKPKGVMYTHRGAYLN 224
Query: 107 TVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHG 166
+ + +LWTLPMFH NGW W + GT++CLR V ++ I H G
Sbjct: 225 SFGETFHNQFTGSTRYLWTLPMFHCNGWCTPWAVTHAAGTHVCLRAVRADAVWDAIDHLG 284
Query: 167 VTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTET 226
VTH+CGA V + + LDRP+ I T+GA P V+ + E++G V H YGLTE
Sbjct: 285 VTHLCGAPTVCTTIVGADQAHALDRPLHITTAGAPPSPTVIGKLEAIGVTVVHVYGLTEV 344
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPET--GMSVKHDGQSQGE 284
G C ++S W+ L +RA +RQGV + VV + + V DG + GE
Sbjct: 345 YGPYTICEYQSAWDELPPDDRAARLSRQGVGMVQAESARVVERDRIPLVDVAADGTAMGE 404
Query: 285 IVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
IV R ++M GY K+ + ++ WF+TGD+GV+H DGY++++DR+KD+IISGGENI
Sbjct: 405 IVLRGNNVMAGYFKNPDATAEAFA-GGWFHTGDLGVMHPDGYIQLRDRAKDIIISGGENI 463
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLP 404
S+ EVE L + + +VA+V D WG+RP A+V L S + +I R L
Sbjct: 464 STVEVEQALVSHDQVVDVAVVGVPDDKWGERPRAYVQLGAGASLAADD--LIAHARKLLA 521
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y + ++ ELP+T+TGK+ KF LR+
Sbjct: 522 GYKVPRDIVFVGELPRTSTGKVLKFELRQ 550
>gi|395333883|gb|EJF66260.1| AMP-dependent synthetase and ligase [Dichomitus squalens LYAD-421
SS1]
Length = 577
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 171/458 (37%), Positives = 239/458 (52%), Gaps = 46/458 (10%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL H V+ +L HS +KL+FVD++S+ L A + PV++ +D P
Sbjct: 136 RLTHGEVAYILEHSGAKLIFVDHESAHLVKGAKA----------PVIVVNDTGKEDDPYE 185
Query: 63 -----------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G +W + E ALNYTSGTT PKGV+ G ++ V++
Sbjct: 186 QFLTSGRKFSNERGWAGLEWERNEDAG--CALNYTSGTTGRPKGVLTTLIGSYLAAVANA 243
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
D + +LW LPMFH +GW++ W + ICLR V P I++ + + GVTH C
Sbjct: 244 YDTGMNRDSTYLWILPMFHASGWTFPWAVTFASAAQICLRSVSYPHIWNHLINSGVTHYC 303
Query: 172 GALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
GA V L ++P + L++PV + +G++P A ++ E H+YG +
Sbjct: 304 GAPTVQIGLINAPMARRLEKPVFAIIAGSAPTAHLIGELEKRNIKPVHTYGPSTV----- 358
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP-ETGMS-------VKHDGQSQG 283
C ++ W + A ERARL ARQG ++ VV P + G S V DGQ+ G
Sbjct: 359 -CYYQPDWTSRALDERARLLARQGHAFATAEEVRVVFPLKEGESLDAPLVDVPKDGQTMG 417
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIVFR +M Y KD E + R +F +GD+ V H DGY+ I DRSKD+IISGGEN
Sbjct: 418 EIVFRGNIVMKEYFKDPEATRKAFR-GGYFNSGDLAVWHPDGYIAIMDRSKDIIISGGEN 476
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL------KWELSKKPTEEAIIE 397
SS +E L +P + EV++VA+ WG+RP AFV L KW E+ + E
Sbjct: 477 ASSLAIEQELSTHPDVLEVSVVARSHPKWGERPMAFVILHPQKAEKWAGRHSEFEKDLKE 536
Query: 398 FCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIV 435
R RLP + + V I ELPKT+TGKIQK LR+IV
Sbjct: 537 HARKRLPGFACPEWVSIVPELPKTSTGKIQKVELRKIV 574
>gi|239826217|ref|YP_002948841.1| AMP-dependent synthetase and ligase [Geobacillus sp. WCH70]
gi|239806510|gb|ACS23575.1| AMP-dependent synthetase and ligase [Geobacillus sp. WCH70]
Length = 530
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 173/438 (39%), Positives = 250/438 (57%), Gaps = 18/438 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL + +L+HSESK+LFVD Q +A + K +++H T
Sbjct: 88 RLRPEDYLFILNHSESKVLFVD-QDLYHFIAPIK---DKLQTVKTIIVHQKNEETDEIDY 143
Query: 64 ----VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
HP+ + +P+ E D +L YTSGTT +PKGV+ HR ++ + S+ R+ +
Sbjct: 144 EEWLAQHPSTSFDRPDIDENDVCSLLYTSGTTGNPKGVMLTHRNNYLHALISMHHLRVSD 203
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
Q +L LPMFH NGW + A G T I LRKVD +I+ I+ + V+ + A VLN
Sbjct: 204 QDTYLHILPMFHVNGWGAPFYYTANGATQIGLRKVDPKVIFDYIQTYKVSVMHMAPTVLN 263
Query: 179 ML-SSSPSTKP-LDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
ML KP +D PV+++ +G++PP + + R E LG+ YG+TE++
Sbjct: 264 MLLQYYDEHKPVIDHPVRVVIAGSAPPPSFVTRVEQDLGWEFIQVYGMTESSPLNTISTI 323
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+S L ++ RLKA+ G IG ++ VV+ E G V HDG++ GE++ RS ++M G
Sbjct: 324 RSHLRDLPLEKQYRLKAKAGYPMIG-CEVKVVN-EYGDEVPHDGKTIGEVIIRSNNVMKG 381
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y K+ E + +R N W YTGD+G V GY++I DR KD+IISGGENISS EVE VLY
Sbjct: 382 YWKNPEATMEAIR-NGWLYTGDMGTVDEYGYIDIVDRKKDIIISGGENISSIEVEGVLYE 440
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ E A++A + WG+ P AFV ++ + TEE +I F R +L H+ A V
Sbjct: 441 HPAVLEAAVIAAPHEKWGETPHAFVVVR--PGHEVTEEELIAFSREKLAHFKAITGVTFV 498
Query: 416 DELPKTATGKIQKFVLRE 433
D LPKTA+GKIQK LR+
Sbjct: 499 DALPKTASGKIQKVHLRK 516
>gi|451997947|gb|EMD90412.1| hypothetical protein COCHEDRAFT_1105220 [Cochliobolus
heterostrophus C5]
Length = 587
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 168/458 (36%), Positives = 246/458 (53%), Gaps = 36/458 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL +S + HS+ ++ D + L P PVL+ D+ AT
Sbjct: 129 RLKPDDISYIFQHSDVDMIIADAEFVSLLDDYKKAKPD-----VPVLVDTDMDATEGELS 183
Query: 65 G---------------HPNFKWVQPES----EWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G W ES E D +AL YTSGTT+ PKGV + HRG+++
Sbjct: 184 GPFDDAVLEGLKYDIEQGGKGWESLESHAKNEEDVIALAYTSGTTARPKGVEYTHRGVYL 243
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
+ ++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+ ++
Sbjct: 244 AAMGNIIESGLNYHSGRAKYLWTLPMFHATGWTFPWSVTAVRGTHYCLRKIDYPEIWRLL 303
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSY 221
K G+TH A V +L ++ + L +PV++ T ASPP+A L S L H Y
Sbjct: 304 KEEGITHFNAAPTVNTLLCAAKEAERLPKPVRV-TVAASPPSAWLFEQMSNLNLSPVHVY 362
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKH 277
GLTET G + +W+TL D E+ ARQG I + V+ PE +V+
Sbjct: 363 GLTETYGPITKGYHVPEWDTLPDKEKYNRMARQGHGFIVAKALRVIKPEQPAGVLTNVEQ 422
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
+GQ GEI+F+ GY KD E ++ + + W +TGD+ V H DG ++I DR+KD+I
Sbjct: 423 NGQEIGEIIFQGNICAKGYYKDAE-ATRKLWEGGWLHTGDLAVWHPDGAIQILDRAKDII 481
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +E++L +PAI EV + A D WG+RP AFV+ K + +I+
Sbjct: 482 ISGGENISSVALEAMLSTHPAILEVGVCAVPDSHWGERPKAFVTTKDGSNSATLGAEVIQ 541
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + + +M + V++ ELPKT+TGKIQK VLRE
Sbjct: 542 WAKENSHISRFMVPREVVVVSELPKTSTGKIQKNVLRE 579
>gi|319949300|ref|ZP_08023378.1| acyl-CoA synthetase [Dietzia cinnamea P4]
gi|319437038|gb|EFV92080.1| acyl-CoA synthetase [Dietzia cinnamea P4]
Length = 543
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 137/358 (38%), Positives = 213/358 (59%), Gaps = 9/358 (2%)
Query: 81 MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGM 140
+A+NYTSGTT PKGV++ HRG ++ + +I + +LWTLPMFH NGW +W +
Sbjct: 179 IAVNYTSGTTGRPKGVMYTHRGAYLNALGEIITQDLDADSRYLWTLPMFHCNGWCTTWAL 238
Query: 141 AAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGA 200
GT++CLR V I+ + G+ + GA VL+ ++ P+ +P++ ++++T+GA
Sbjct: 239 TGARGTHVCLRAVRGEDIWRLFDDEGINRLAGAPAVLSTIADDPAARPIEG-IRMITAGA 297
Query: 201 SPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIG 260
P +L R E LG V+ YGLTET G C + W L ERA LK+RQGV I
Sbjct: 298 PPSPTILRRFEELGIDVTQVYGLTETYGPFTVCTPQPGWADLDPDERAGLKSRQGVAMIH 357
Query: 261 LADMDVVH----PETGM-SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYT 315
+ VV ET + V DG + GE+V +M GY D E ++ WF++
Sbjct: 358 ADTVRVVERTSPGETRLIDVPADGVTMGEVVMTGNGVMKGYFNDPEATAAAFA-GGWFHS 416
Query: 316 GDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKR 375
GD+GV+H DGY+++ DR+KDV++SGGENIS+ EVE + +P + + A+V+ D+ WG+R
Sbjct: 417 GDLGVMHPDGYVQLLDRAKDVVVSGGENISTIEVEQAIVSHPDVVDCAVVSMPDEKWGER 476
Query: 376 PCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
P A+V ++ + E ++E CR ++ Y +V + + LP+T+TGK++K LR+
Sbjct: 477 PKAYVVVR--PGSQLDEAGVVEHCRTKIARYKVPGAVELTEALPRTSTGKVRKNELRD 532
>gi|302526619|ref|ZP_07278961.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
gi|302435514|gb|EFL07330.1| O-succinylbenzoate-CoA ligase [Streptomyces sp. AA4]
Length = 509
Score = 268 bits (685), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 149/361 (41%), Positives = 218/361 (60%), Gaps = 5/361 (1%)
Query: 74 PESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENG 133
P E P+A+N+TSGTT+ PKGVV+ HRG ++ + ++ + +LWTLPMFH NG
Sbjct: 153 PGDERQPLAVNFTSGTTAGPKGVVYTHRGAYLNALGQVVSTGLQASSRYLWTLPMFHCNG 212
Query: 134 WSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPV 193
W Y+W + A G ++ LRK+D + +I+ VTH+ GA VVL++L + + V
Sbjct: 213 WCYTWAVTAAGARHVTLRKMDAVRAFELIEQEAVTHLSGAPVVLDLLVQASGGARFTQRV 272
Query: 194 KILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKAR 253
+ GA P A + +G V+H YG+TET G + C + +W L RA++ AR
Sbjct: 273 QFAVGGAPPSPAAIAAMSGIGIEVTHLYGMTETYGPSLMCVPRPEWQELDPAGRAKMMAR 332
Query: 254 QGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWF 313
QGVRT+ + VV PE V DG++ GE++ RS ++M GYL + E + W
Sbjct: 333 QGVRTVNVESARVVTPEF-EDVPADGETLGELMIRSNTVMAGYLDNPEATEAAF-AGGWL 390
Query: 314 YTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWG 373
+TGD+ V H DGY+E++DR KDVIISGGENI+S EVE+ L + A+ E A+VA+ D WG
Sbjct: 391 HTGDVAVRHPDGYVEVRDRLKDVIISGGENIASIEVENALLGHEAVAEAAVVAKADPRWG 450
Query: 374 KRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ P AFV L+ + +E +IE+ R RL H+ + + ELPKT+TGKI+K LR+
Sbjct: 451 EVPVAFVRLR--DGAEVSEADLIEWLRERLAHFKVPRDLRFA-ELPKTSTGKIRKAELRK 507
Query: 434 I 434
+
Sbjct: 508 L 508
>gi|111025247|ref|YP_707667.1| AMP-binding enzyme [Rhodococcus jostii RHA1]
gi|110824226|gb|ABG99509.1| AMP-binding enzyme [Rhodococcus jostii RHA1]
Length = 532
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 211/364 (57%), Gaps = 8/364 (2%)
Query: 75 ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGW 134
+ E +++NYTSGTT PKGV++ HRG ++ ++S + +LWTLPMFH NGW
Sbjct: 160 DDETRTISINYTSGTTGRPKGVMYTHRGAYLNSLSQIHHQHFDIDTKYLWTLPMFHCNGW 219
Query: 135 SYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVK 194
W + A GT++C+R V ++S+I + H+ GA VL L+++ PLDR +
Sbjct: 220 CGPWAVTAASGTHVCIRVVRGDAMWSLIDSEKIDHMSGAPTVLTTLATADGAHPLDRSMT 279
Query: 195 ILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQ 254
I T+GA P + +LG + H YGLTET G C ++ W L + ARL ARQ
Sbjct: 280 ITTAGAPPSPTTIRAVRALGAEIVHVYGLTETYGPCAVCEPQADWAALDEDTLARLLARQ 339
Query: 255 GVRTIGLADMDVVHPETG-----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRD 309
GV + + VV + G + V +G GEIV R +M GY D ++
Sbjct: 340 GVGMLASGPVRVVRTQRGPHGELVDVASNGTEIGEIVMRGNIVMKGYFGDDSATAEAF-S 398
Query: 310 NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRD 369
WF++GD+GV+H DGY+++ DR+KD++ISGGENIS+ EVE VL +P++ +VA++ D
Sbjct: 399 GGWFHSGDLGVMHPDGYIQLMDRAKDIVISGGENISTIEVEQVLMSHPSVLDVAVIGVPD 458
Query: 370 KFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKF 429
WG+RP AFV LK + ++ + +F R + + A + ++ ELPKT+TGK +K
Sbjct: 459 TKWGERPKAFVVLK--TNSTVSDCDLTQFAREHIAAFKAPREIVFLPELPKTSTGKTRKN 516
Query: 430 VLRE 433
LR+
Sbjct: 517 ELRD 520
>gi|330912859|ref|XP_003296095.1| hypothetical protein PTT_04844 [Pyrenophora teres f. teres 0-1]
gi|311332023|gb|EFQ95805.1| hypothetical protein PTT_04844 [Pyrenophora teres f. teres 0-1]
Length = 587
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 247/458 (53%), Gaps = 36/458 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL H +S + HS+ ++ D + L P+ P+L+ D AT
Sbjct: 129 RLKHDDISYIFQHSDVDMIIADAEFVHLLDDYRKERPT-----VPILVDTDTDATEGELS 183
Query: 65 G---------------HPNFKWV----QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G W Q ++E D +AL YTSGTT+ PKGV + HRG+++
Sbjct: 184 GPFDDAVLEGLKHDIEQGGKGWADLESQAKNEEDVIALAYTSGTTARPKGVEYTHRGVYL 243
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
+ ++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+ ++
Sbjct: 244 AALGNVIESGLNYHTGRAKYLWTLPMFHATGWTFPWSVTAVRGTHYCLRKIDYPEIWRLL 303
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSY 221
K G+TH A V +L ++ + L +PV++ T ASPP+A L S L H Y
Sbjct: 304 KEEGITHFNAAPTVNTLLCAAKEAERLPQPVRV-TVAASPPSAWLFEQMSNLNLHPVHVY 362
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKH 277
GLTET G + +W+TL ER ARQG I V+ E ++V+
Sbjct: 363 GLTETYGPITKGYHMPEWDTLPIKERYDRMARQGHGFITGKATRVIKTEQAPGVLINVEK 422
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
+GQ GEI+F GY KD E ++ + + W +TGD+ V H DG ++I DR+KD+I
Sbjct: 423 NGQEIGEIIFEGNICAKGYYKDAE-ATRKLWEGGWLHTGDLAVWHPDGAIKILDRAKDII 481
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +E++L +P+I EV + A D WG+RP AFV+ K + + + +I+
Sbjct: 482 ISGGENISSVALEAMLSTHPSILEVGVCAVPDSHWGERPKAFVTTKDGTNSETLGQEVIQ 541
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + + +M + V++ ELPKT+TGKIQK VLRE
Sbjct: 542 WAKENSAISRFMVPREVVVVKELPKTSTGKIQKNVLRE 579
>gi|326381600|ref|ZP_08203294.1| AMP-binding enzyme [Gordonia neofelifaecis NRRL B-59395]
gi|326199847|gb|EGD57027.1| AMP-binding enzyme [Gordonia neofelifaecis NRRL B-59395]
Length = 542
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 212/358 (59%), Gaps = 8/358 (2%)
Query: 81 MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGM 140
+++NYTSGTT PKGV++ HRG ++ ++ + + +LWTLPMFH NGW W +
Sbjct: 176 ISINYTSGTTGKPKGVMYTHRGAYLASLGNAMTQGFGIDTRYLWTLPMFHCNGWCGPWAV 235
Query: 141 AAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGA 200
AV GT++CLR V ++ +I V + GA VL L+++ +DRP+ I T+GA
Sbjct: 236 TAVAGTHVCLRAVRGDDMWRLIDTEQVNQMSGAPTVLTTLATAGEAHRMDRPLTIATAGA 295
Query: 201 SPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIG 260
P ++ +LG + H YGLTET G C W+ L+ E A +RQGV +
Sbjct: 296 PPSPTIIRAIGNLGIRLVHVYGLTETYGPYSVCEPSDGWSELSGDELAVRMSRQGVGMLT 355
Query: 261 LADMDVVHPETG-----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYT 315
+ VV PE + V+ DG GEIV R +M GY +D E ++ WF++
Sbjct: 356 ADRLRVVLPEPADDGSLVDVEPDGVQMGEIVMRGNVVMKGYFEDPERTAEAFA-GGWFHS 414
Query: 316 GDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKR 375
GD+GV+H DGY+++ DR+KDVIISGGENIS+ EVE + +PA+ +VA++ D WG+R
Sbjct: 415 GDLGVMHPDGYVQLLDRAKDVIISGGENISTIEVEQAVVSHPAVLDVAVIGVPDDKWGER 474
Query: 376 PCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
P A+ L+ ++ TE A+I ++R+ Y A + V D+LPKT+TGKI+K LR+
Sbjct: 475 PKAYAVLR--PGEQVTEAAVIAHVKSRIASYKAPREVEFVDDLPKTSTGKIRKNELRD 530
>gi|384100517|ref|ZP_10001576.1| AMP-binding enzyme [Rhodococcus imtechensis RKJ300]
gi|383841952|gb|EID81227.1| AMP-binding enzyme [Rhodococcus imtechensis RKJ300]
Length = 399
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/364 (38%), Positives = 211/364 (57%), Gaps = 8/364 (2%)
Query: 75 ESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGW 134
+ E +++NYTSGTT PKGV++ HRG ++ ++S + +LWTLPMFH NGW
Sbjct: 27 DDETRTISINYTSGTTGRPKGVMYTHRGAYLNSLSQIHHQHFDIDTKYLWTLPMFHCNGW 86
Query: 135 SYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVK 194
W + A GT++C+R V ++S+I + H+ GA VL L+++ PLDR +
Sbjct: 87 CGPWAVTAASGTHVCIRVVRGDAMWSLIDSEKIDHMSGAPTVLTTLATADGAHPLDRSMT 146
Query: 195 ILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQ 254
I T+GA P + +LG + H YGLTET G C ++ W L + ARL ARQ
Sbjct: 147 ITTAGAPPSPTTIRAVRALGAEIVHVYGLTETYGPCAVCEPQADWAALDEDTLARLLARQ 206
Query: 255 GVRTIGLADMDVVHPETG-----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRD 309
GV + + VV + G + V +G GEIV R +M GY D ++
Sbjct: 207 GVGMLASGPVRVVRTQRGPHGELVDVASNGTEIGEIVMRGNIVMKGYFGDDSATAEAF-S 265
Query: 310 NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRD 369
WF++GD+GV+H DGY+++ DR+KD++ISGGENIS+ EVE VL +P++ +VA++ D
Sbjct: 266 GGWFHSGDLGVMHPDGYIQLMDRAKDIVISGGENISTIEVEQVLMSHPSVLDVAVIGVPD 325
Query: 370 KFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKF 429
WG+RP AFV LK + ++ + +F R + + A + ++ ELPKT+TGK +K
Sbjct: 326 TKWGERPKAFVVLK--TNSTVSDCDLTQFAREHIAAFKAPREIVFLPELPKTSTGKTRKN 383
Query: 430 VLRE 433
LR+
Sbjct: 384 ELRD 387
>gi|323457170|gb|EGB13036.1| hypothetical protein AURANDRAFT_58580 [Aureococcus anophagefferens]
Length = 501
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 164/446 (36%), Positives = 231/446 (51%), Gaps = 60/446 (13%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPL---ALAALSLFPSNTILPKPVLIHDDVSA 58
V RLD V+ +L HSE+++L D + + ALAAL+ P ++ P ++ A
Sbjct: 107 VNTRLDAATVAYVLEHSEARVLVADARYAGTYGPALAALANPPRLVVVGGPGATYEAFVA 166
Query: 59 TSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
+ G +V+P EWD +A+NYT
Sbjct: 167 S-----GDAGSGFVRPRDEWDALAVNYT-------------------------------- 189
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
FH NGW + W + AVGG N+CLR V I VTH+CGA VV+
Sbjct: 190 ----------FHCNGWGFPWTLPAVGGANVCLRDVSADAIADAFVAARVTHLCGAPVVVR 239
Query: 179 MLSSSPSTKPLDR------PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVS 232
+ + R P++++T GA PPAA L R E+ G V+H YGLTET G
Sbjct: 240 TAIEAAAATRAARGGERAAPLRMMTGGAPPPAATLRRAEAAGLDVTHVYGLTETYGPATL 299
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
C +++W L D A ++RQGV +DV+ +TG V DG + GEI FR +
Sbjct: 300 CQPRAKWAALTDAAAAEKRSRQGVAHAATGGVDVLDRDTGAPVPADGATMGEICFRGNIV 359
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
M GYLKD ++ R F +GD+ V H+DGY++IKDRSKD+IISGGENIS+ E+E+
Sbjct: 360 MKGYLKDAAATAAAFRLG-AFASGDLAVKHADGYVQIKDRSKDIIISGGENISTVEIEAA 418
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
L + + E A+VA+ D WG+ PCAFV + + E +++ F + RL + A KSV
Sbjct: 419 LMEHDDVEECAVVARPDAHWGETPCAFVETRAGATLD--EASLLAFAKGRLAGFKAPKSV 476
Query: 413 IIEDELPKTATGKIQKFVLREIVNAV 438
+ LPKT+TGKIQKF LR+ A+
Sbjct: 477 VF-GALPKTSTGKIQKFALRDRARAL 501
>gi|449456943|ref|XP_004146208.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
gi|449533036|ref|XP_004173483.1| PREDICTED: probable acyl-activating enzyme 1, peroxisomal-like
[Cucumis sativus]
Length = 470
Score = 264 bits (675), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 162/452 (35%), Positives = 253/452 (55%), Gaps = 43/452 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALA----------ALSLFPSN--TILPKPVLI 52
+LD +S+LL K++F+D Q P+ L AL L PS+ T LP L
Sbjct: 28 KLDSPTLSLLLQQLNPKVIFIDSQFLPILLKSLENSSIKFPALVLIPSDPDTPLPSEFLD 87
Query: 53 HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
++ V A G +F +P +E DP+++NYTSG+T KGV++ HR ++ +++++
Sbjct: 88 YNKVLAMR---FGDDDFT-PRPNAELDPISINYTSGSTGLHKGVIYSHRAAYLNSLATIF 143
Query: 113 DWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
+I + PVFLWT+ MF NGW + W MAA+GG NICLR V I++ ++ H VT
Sbjct: 144 RSKICSSTSSPVFLWTVDMFRCNGWCFIWVMAALGGCNICLRTVTADAIFTNVELHRVTL 203
Query: 170 ICGALVVLNMLSSSPST----KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTE 225
+CG +L M+ S S + L R V ++ +GA P +L + LGF +S+ YG+TE
Sbjct: 204 LCGPPTLLKMIYESSSNNCMPRRLSRRVDLIVAGALPIKEILTKVNELGFNISYGYGMTE 263
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
G + WK + E ++ + ++ ++DV P + SV DG++ GE+
Sbjct: 264 AMGPAIIRPWKPTF------EEDNVQFEDLITSL---EIDVKDPISMESVLGDGETLGEV 314
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII-SGGEN- 343
+ R ++M GY K+ + + +W+ TGD+GV H G +E+KDR+KD+++ + GE
Sbjct: 315 MLRGNTLMSGYYKNMKATHEAFIGENWYRTGDVGVRHKSGRIEMKDRAKDIVVRTDGEGA 374
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARL 403
+S+ EVE VL +P + E A+V +R + FV LK SK+ +E I+EFCR L
Sbjct: 375 VSTVEVEGVLMSHPNVAEAAVVGERTLY------GFVKLK-NRSKENGDE-IVEFCRMHL 426
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLREIV 435
P +M K ++ D LP +TGK+QKF LRE V
Sbjct: 427 PEFMIPKRIVFGD-LPMNSTGKVQKFALREKV 457
>gi|404330202|ref|ZP_10970650.1| fatty acyl CoA synthase [Sporolactobacillus vineae DSM 21990 =
SL153]
Length = 530
Score = 264 bits (674), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 165/438 (37%), Positives = 241/438 (55%), Gaps = 15/438 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPL---ALAALSLFPSNTILPKPVLIHDDVSATSS 61
RL + +L+HS + +L D +PL L +LP P + +
Sbjct: 88 RLMPTDYAYILNHSGAGILLADADLAPLIEPVKDELRRIEHFLLLPSPSVSEREGWTGYE 147
Query: 62 PTVG-HPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQ 119
P + +P K V PE E D ++ YTSGTT PKGV+H HR LF +++++ R+ +
Sbjct: 148 PLLATYPAEKPVIPEMDELDLASILYTSGTTGLPKGVMHSHRSLFFNALNTVVHLRVSDH 207
Query: 120 PVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNM 179
V L TLP+FH NGW + +G T++ LRK+D I+ ++K VT C A VL+M
Sbjct: 208 DVLLHTLPLFHVNGWGTPFTFTGMGATHVMLRKIDPAHIFKLVKEEKVTIACMAPTVLSM 267
Query: 180 LSSSPSTKPL--DRPVKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTETAGFVVSCAWK 236
L + P + V+++ +G++PP + + + E L + YG+TE A F+ K
Sbjct: 268 LVNDPQAQTFTPKHHVRVVIAGSAPPPSYVQKVEEQLKWEFVQVYGMTEAAPFLTVSHVK 327
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDV-VHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ + + R+KA+ G IG+ +M+V V E G V+ DG GEIV R S+M G
Sbjct: 328 AHLDQ-SKENLHRIKAKAG---IGMLNMEVRVVDENGQDVRPDGTQVGEIVTRGNSVMEG 383
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y + + +D W+YTGD+G + +GY+EI DR KD+IISGGENISS EVE VLY
Sbjct: 384 YWLQPDETEKVFKDG-WYYTGDMGTIDQEGYIEIVDRKKDIIISGGENISSIEVEGVLYR 442
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PAI E ++A WG+ P A +K ++ TE+ +I FCR LP + KS
Sbjct: 443 HPAILEATVIAVPHDKWGEVPHAVCVVKKDMPAA-TEQDLIAFCRTLLPSFKVPKSCSFV 501
Query: 416 DELPKTATGKIQKFVLRE 433
+ELPKTA+GKIQK LRE
Sbjct: 502 EELPKTASGKIQKVKLRE 519
>gi|448236880|ref|YP_007400938.1| putative long-chain-fatty-acid--CoA ligase [Geobacillus sp. GHH01]
gi|445205722|gb|AGE21187.1| putative long-chain-fatty-acid--CoA ligase [Geobacillus sp. GHH01]
Length = 531
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 245/443 (55%), Gaps = 29/443 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP--KPVLIHDDVSATSSP 62
RL +L+HSE+K+LFVD + L + P L + +++H A
Sbjct: 88 RLKPDDYVFILNHSETKVLFVDQELYGL------IAPVKNKLETVEEIIVHHKTEAAIDE 141
Query: 63 TVGHPNFKWVQPES----------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
T +W+ +S E D +L YTSGTT +PKGV+ HR ++ + ++
Sbjct: 142 TAYD---EWLAAQSSAPVPRPMIDENDICSLLYTSGTTGNPKGVMLTHRNNYLHALVTMH 198
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
R+ ++ +L LPMFH NGW + A G T I LRKVD +I+ ++K H VT +
Sbjct: 199 HLRVSDRDTYLHVLPMFHVNGWGAPFYYTANGATQIGLRKVDPKVIFDLVKEHQVTVMHM 258
Query: 173 ALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGF 229
A VLNML D P V+++ +G++PP A + R E LG+ YG+TE++
Sbjct: 259 APTVLNMLLQYYEQYQPDVPEGVRVVIAGSAPPPAFVARVEEKLGWEFIQVYGMTESSPL 318
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
+ Q + L ++ R+KA+ G IG ++ VV E G V H+G++ GE++ RS
Sbjct: 319 STISLIRPQLDGLPVEQKQRIKAKAGYPMIG-CEVKVVD-ENGDEVPHNGRTIGEVIVRS 376
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY K++E ++ +RD W YTGD+ V G+++I DR KD+IISGGENISS EV
Sbjct: 377 HGVMKGYWKNEEATAATIRDG-WLYTGDMATVDEYGHIDIVDRKKDIIISGGENISSIEV 435
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA+ E A++A + WG+ P AFV ++ TEE +I F R +L H+ A
Sbjct: 436 EGALYEHPAVLEAAVIAAPHEKWGETPHAFVVVR--PGHNVTEEELIAFSREKLAHFKAI 493
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
V DELPKTA+GKIQK LR
Sbjct: 494 TGVTFVDELPKTASGKIQKVHLR 516
>gi|261418937|ref|YP_003252619.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|319765755|ref|YP_004131256.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
gi|261375394|gb|ACX78137.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC61]
gi|317110621|gb|ADU93113.1| AMP-dependent synthetase and ligase [Geobacillus sp. Y412MC52]
Length = 531
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 245/443 (55%), Gaps = 29/443 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP--KPVLIHDDVSATSSP 62
RL +L+HSE+K+LFVD + L + P L + +++H A
Sbjct: 88 RLKPDDYVFILNHSETKVLFVDQELYGL------IAPVKNKLETVEEIIVHHKTEAAIDE 141
Query: 63 TVGHPNFKWVQPES----------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
T +W+ +S E D +L YTSGTT +PKGV+ HR ++ + ++
Sbjct: 142 TAYD---EWLAAQSSAPVPRPMIDENDVCSLLYTSGTTGNPKGVMLTHRNNYLHALVTMH 198
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
R+ ++ +L LPMFH NGW + A G T I LRKVD +I+ ++K H VT +
Sbjct: 199 HLRVSDRDTYLHVLPMFHVNGWGAPFYYTANGATQIGLRKVDPKVIFDLVKEHQVTVMHM 258
Query: 173 ALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGF 229
A VLNML D P V+++ +G++PP A + R E LG+ YG+TE++
Sbjct: 259 APTVLNMLLQYYEQYQPDVPEGVRVVIAGSAPPPAFVARVEEKLGWEFIQVYGMTESSPL 318
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
+ Q + L ++ R+KA+ G IG ++ VV E G V H+G++ GE++ RS
Sbjct: 319 STISLIRPQLDGLPVEQKQRIKAKAGYPMIG-CEVKVVD-ENGDEVPHNGRAIGEVIVRS 376
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY K++E ++ +RD W YTGD+ V G+++I DR KD+IISGGENISS EV
Sbjct: 377 HGVMKGYWKNEEATAATIRDG-WLYTGDMATVDEYGHIDIVDRKKDIIISGGENISSIEV 435
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA+ E A++A + WG+ P AFV ++ TEE +I F R +L H+ A
Sbjct: 436 EGALYEHPAVLEAAVIAAPHEKWGETPHAFVVVR--PGHNVTEEELIAFSREKLAHFKAI 493
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
V DELPKTA+GKIQK LR
Sbjct: 494 TGVTFVDELPKTASGKIQKVHLR 516
>gi|297531112|ref|YP_003672387.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
gi|297254364|gb|ADI27810.1| AMP-dependent synthetase and ligase [Geobacillus sp. C56-T3]
Length = 531
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/443 (37%), Positives = 246/443 (55%), Gaps = 29/443 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP--KPVLIHDDVSATSSP 62
RL +L+HSE+K+LFVD + L + P L + +++H A
Sbjct: 88 RLKPDDYVFILNHSETKVLFVDQELYGL------IAPVKNKLETVEEIIVHHKTEAAIDE 141
Query: 63 TVGHPNFKWVQPES----------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
TV +W+ +S E D +L YTSGTT +PKGV+ HR ++ + ++
Sbjct: 142 TVYD---EWLAAQSSAPVPRPMIDENDICSLLYTSGTTGNPKGVMLTHRNNYLHALVTMH 198
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
R+ ++ +L LPMFH NGW + A G T I LRKVD +I+ ++K H VT +
Sbjct: 199 HLRVSDRDTYLHVLPMFHVNGWGAPFYYTANGATQIGLRKVDPKVIFDLVKEHQVTVMHM 258
Query: 173 ALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGF 229
A VLN+L D P V+++ +G++PP A + R E LG+ YG+TE++
Sbjct: 259 APTVLNILLQYYEQYQPDVPEGVRVVIAGSAPPPAFVARVEEKLGWEFIQVYGMTESSPL 318
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
+ Q + L ++ R+KA+ G IG ++ VV E G V H+G++ GE++ RS
Sbjct: 319 STISLIRPQLDGLPVEQKQRIKAKAGYPMIG-CEVKVVD-ENGDEVPHNGRTIGEVIVRS 376
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY K++E ++ +RD W YTGD+ V G+++I DR KD+IISGGENISS EV
Sbjct: 377 HGVMKGYWKNEEATAATIRDG-WLYTGDMATVDEYGHIDIVDRKKDIIISGGENISSIEV 435
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA+ E A++A + WG+ P AFV ++ TEE +I F R +L H+ A
Sbjct: 436 EGALYEHPAVLEAAVIAAPHEKWGETPHAFVVVR--PGHNVTEEELIAFSREKLAHFKAI 493
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
V DELPKTA+GKIQK LR
Sbjct: 494 TGVTFVDELPKTASGKIQKVHLR 516
>gi|443894677|dbj|GAC72024.1| acyl-coa synthetase [Pseudozyma antarctica T-34]
Length = 602
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/404 (38%), Positives = 215/404 (53%), Gaps = 27/404 (6%)
Query: 55 DVSATSSPTVGHPNFKWV---QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
D SS P W P+ E P+AL YTSGTT PKGV+ HRG ++ V++
Sbjct: 193 DQHRQSSKPTAEPKTGWKLIDAPQDEEQPIALCYTSGTTGRPKGVLTNHRGAYLAAVANA 252
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ I V+LW LPMFH GW++ W + A T+ +RKVD +I+ + +HGVTH C
Sbjct: 253 FEANITQDSVYLWVLPMFHACGWTFPWAVTASLATHHTIRKVDNRVIWDALVNHGVTHYC 312
Query: 172 GALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
GA V L++ P + LDR V + + ++P A +L + ESL H YGLTET G
Sbjct: 313 GAPTVQIGLTNHPDARKLDRRVNVAVAASAPTANLLAKMESLNLYPVHVYGLTETYGPFT 372
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG--------MSVKHDGQSQG 283
++ +W L RAR+ ARQG + ++ VV E+ + V DG+ G
Sbjct: 373 RRYFEPEWAKLDVDARARMMARQGHSYLTSDEVRVVRTESSNDKTTSDLIDVARDGKETG 432
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R M+GY DQ + + WF+TGD+ V H G ++I DR KD+IISGGEN
Sbjct: 433 EIVVRGNMTMIGYYNDQAATDKAVMKG-WFHTGDLAVRHPGGEIQILDRGKDIIISGGEN 491
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAI-------- 395
ISS VE L + + E ++A+ + WG+R AFV L + K EA+
Sbjct: 492 ISSLMVEQELAAHADVLECCVIARPHEKWGERGQAFVVLTEQAKAKLDAEALKRKGSKEN 551
Query: 396 IEF-------CRARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
+EF C+ R+ + + I DELPKT+TGK+QK VLR
Sbjct: 552 VEFVELLKKHCKERMSGFAVPEWFDIVDELPKTSTGKVQKNVLR 595
>gi|414588649|tpg|DAA39220.1| TPA: hypothetical protein ZEAMMB73_694106 [Zea mays]
Length = 1124
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 125/193 (64%), Positives = 151/193 (78%)
Query: 195 ILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQ 254
ILT+ A PPAAVL RTES+GF VSH YGLTETA VV CAWK +WN L +ERARLKARQ
Sbjct: 915 ILTADAPPPAAVLHRTESIGFEVSHGYGLTETARLVVCCAWKGEWNKLPASERARLKARQ 974
Query: 255 GVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFY 314
GVRT G+A++D++ ETG SV DG + GEI+ R G +MLGYL + + + +RDN WFY
Sbjct: 975 GVRTPGMAEVDIIDGETGHSVPCDGSTMGEIMLRGGCVMLGYLDNDKATKAAIRDNGWFY 1034
Query: 315 TGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGK 374
TGD+GV+H DGY+EI DRSK+VII+GGENISS EVESVLY +PA+NE A+VA+ D FWG+
Sbjct: 1035 TGDVGVMHPDGYMEICDRSKNVIINGGENISSVEVESVLYSHPAMNEAAMVARPDDFWGE 1094
Query: 375 RPCAFVSLKWELS 387
C FVSLK E S
Sbjct: 1095 MSCTFVSLKEEGS 1107
>gi|373856948|ref|ZP_09599691.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
gi|372453194|gb|EHP26662.1| AMP-dependent synthetase and ligase [Bacillus sp. 1NLA3E]
Length = 532
Score = 262 bits (669), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/442 (37%), Positives = 243/442 (54%), Gaps = 26/442 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL +L+HSESK+LFVD L + + +++H +P +
Sbjct: 88 RLKPDDYLFILNHSESKILFVDEDLYSL----IKPIKDKLTTVEAIVVH--YKEKDTPEL 141
Query: 65 GHPNFKWVQPESEW----------DPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
+ W+ +SE D +L YTSGTT +PKGV+ HR +I ++S+
Sbjct: 142 DYD--AWLSNQSELPFKREVLDEDDVCSLLYTSGTTGNPKGVMLTHRNNYIHALTSMHHL 199
Query: 115 RIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGAL 174
R+ +Q V L LPMFH NGW + A G T +C RK I++ ++ H V+ + A
Sbjct: 200 RVSDQDVLLHVLPMFHVNGWGSPFYYTANGATQVCSRKTTAETIFAALQKHKVSIMHMAP 259
Query: 175 VVLNMLSS--SPSTKPLDRPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVV 231
VLN L + +D+ V+++ +G++PP A + R E LG+ YG+TE++
Sbjct: 260 TVLNSLLQFYEKNVPQIDQAVRVVIAGSAPPPAFITRVEKELGWEFIQVYGMTESSPLST 319
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
+S L ++ R+KA+ G IG ++ +V+ E G V HDG+ GE+V RS
Sbjct: 320 VSTIRSHLKDLPVKDQYRMKAKAGHSMIG-CEVKIVN-EDGEEVAHDGKEIGEVVIRSNG 377
Query: 292 IMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
+MLGY K++E + +R N + YTGD+G V G ++I DR KDVIISGGENISS EVE
Sbjct: 378 VMLGYWKNEEETMKTIR-NGYLYTGDMGNVDEYGNIDIVDRKKDVIISGGENISSIEVEG 436
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
VLY +P+I E A++A + WG+ P AFV L+ S TE+ II F R +L H+ A
Sbjct: 437 VLYEHPSIVEAAVIAVPHEKWGETPHAFVVLRENTSL--TEQEIIAFSREKLAHFKAVTG 494
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V ELPKTA+GKIQK LR+
Sbjct: 495 VTFVTELPKTASGKIQKVHLRD 516
>gi|448593682|ref|ZP_21652637.1| medium-chain acyl-CoA ligase [Haloferax elongans ATCC BAA-1513]
gi|445729463|gb|ELZ81059.1| medium-chain acyl-CoA ligase [Haloferax elongans ATCC BAA-1513]
Length = 545
Score = 261 bits (666), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 165/454 (36%), Positives = 241/454 (53%), Gaps = 35/454 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSA-TSSPT 63
RL + +++ +K + VDY+ + A P+ V I +D A PT
Sbjct: 89 RLTPSELDYVVNDCGAKAIIVDYEYAEKIEAIRDEIPTE------VFITNDRDALEDEPT 142
Query: 64 VGHPNFK-------------WVQPESEWDPMA-LNYTSGTTSSPKGVVHCHRGLFIITVS 109
V N++ + +PE E D +A +NYTSGTT +PKGVV HR I T
Sbjct: 143 VDAENWEDFDAAIAETDPDAYDRPEMEEDDVAAINYTSGTTGNPKGVVMTHRAEVIHTYL 202
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
S I ++ V+LWTLPMFH NGW + + + +G T++C R +D I+ I V++
Sbjct: 203 SAAHQEISDEDVYLWTLPMFHANGWGHIFSITGMGATHVCTRGIDTADIFETIVEEDVSY 262
Query: 170 ICGALVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGL 223
+C A V+NML P T D P++I + GA+PP A + E G+ YGL
Sbjct: 263 MCAAPTVMNMLIDHYRDHEPQTLG-DNPLRIASGGAAPPEATMRTLEDDFGWHFKQMYGL 321
Query: 224 TETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQG 283
TET +VS ++ ++ +D+ R +K + G+ +G ++ VV E G V HDGQ+ G
Sbjct: 322 TETGPLIVSSDFRRFYDEDSDS-RFAVKKKTGIGFMG-TEITVVD-EDGEEVPHDGQTVG 378
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
E+V R I+ Y E + D WF+TGD+ V G+L I+DR KD+IISGG
Sbjct: 379 EVVVRGNQILEAYWNKPEETEKAFNDRIEGWFHTGDLATVDEKGFLTIQDRKKDIIISGG 438
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFC 399
ENISS E+E VL+ +PA++EVA+V WG+ P A+V S+ P T++ + F
Sbjct: 439 ENISSLELEDVLHDHPAVSEVAIVPTPSDKWGESPKAYVLPTSGDSQNPGVTKDELESFM 498
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
R L Y K V + LP TATGK+QK+ LR+
Sbjct: 499 RESLAGYKVVKEVEFVENLPTTATGKVQKYELRQ 532
>gi|375007561|ref|YP_004981194.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|359286410|gb|AEV18094.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Geobacillus
thermoleovorans CCB_US3_UF5]
Length = 531
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 244/443 (55%), Gaps = 29/443 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP--KPVLIHDDVSATSSP 62
RL +L+HSE+K+LFVD + L + P L + +++H A
Sbjct: 88 RLKPDDYVFILNHSETKVLFVDQELYGL------IAPVKNKLETVEEIIVHHKTEAAIDE 141
Query: 63 TVGHPNFKWVQPES----------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
T +W+ +S E D +L YTSGTT +PKGV+ HR ++ + ++
Sbjct: 142 TAYE---EWLAAQSSAPVPRPMIDENDICSLLYTSGTTGNPKGVMLTHRNNYLHALVTMH 198
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
R+ ++ +L LPMFH NGW + A G T I LRKVD +I+ ++K H VT +
Sbjct: 199 HLRVSDRDTYLHVLPMFHVNGWGAPFYYTANGATQIGLRKVDPKVIFDLVKEHQVTVMHM 258
Query: 173 ALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGF 229
A VLNML D P V+++ +G++PP A + R E LG+ YG+TE++
Sbjct: 259 APTVLNMLLQYYEQYQPDVPEGVRVVIAGSAPPPAFVARVEEKLGWEFIQVYGMTESSPL 318
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
+ Q + L ++ RLKA+ G IG ++ VV E G V +G++ GE++ RS
Sbjct: 319 STISLIRPQLDGLPAEQKQRLKAKAGYPMIG-CEVKVVD-ENGEEVPKNGRAIGEVIVRS 376
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY K++E ++ +RD W YTGD+ V G+++I DR KD+IISGGENISS EV
Sbjct: 377 HGVMKGYWKNEEATAATIRDG-WLYTGDMATVDEYGHIDIVDRKKDIIISGGENISSIEV 435
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA+ E A++A + WG+ P AFV ++ +EE +I F R +L H+ A
Sbjct: 436 EGALYEHPAVLEAAVIAVPHEKWGETPHAFVVVR--PGHTVSEEELIAFSREKLAHFKAI 493
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
V DELPKTA+GKIQK LR
Sbjct: 494 TGVTFVDELPKTASGKIQKVHLR 516
>gi|56419228|ref|YP_146546.1| AMP-binding protein [Geobacillus kaustophilus HTA426]
gi|56379070|dbj|BAD74978.1| AMP-binding enzyme [Geobacillus kaustophilus HTA426]
Length = 531
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 244/443 (55%), Gaps = 29/443 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP--KPVLIHDDVSATSSP 62
RL +L+HSE+K+LFVD + L + P L + +++H A
Sbjct: 88 RLKPDDYVFILNHSETKVLFVDQELYGL------IAPVKNKLETVEEIIVHHKTEAAIDE 141
Query: 63 TVGHPNFKWVQPES----------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
T +W+ +S E D +L YTSGTT +PKGV+ HR ++ + ++
Sbjct: 142 TAYE---EWLAAQSSAPVPRPMIDENDICSLLYTSGTTGNPKGVMLTHRNNYLHALVTMH 198
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
R+ ++ +L LPMFH NGW + A G T I LRKVD +I+ ++K H VT +
Sbjct: 199 HLRVSDRDTYLHVLPMFHVNGWGAPFYYTANGATQIGLRKVDPKVIFDLVKEHQVTVMHM 258
Query: 173 ALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGF 229
A VLNML D P V+++ +G++PP A + R E LG+ YG+TE++
Sbjct: 259 APTVLNMLLQYYEQYQPDVPEGVRVVIAGSAPPPAFVARVEEKLGWEFIQVYGMTESSPL 318
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRS 289
+ Q + L ++ RLKA+ G IG ++ VV E G V +G++ GE++ RS
Sbjct: 319 STISLIRPQLDGLPVEQKQRLKAKAGYPMIG-CEVKVVD-ENGEEVPKNGRAIGEVIVRS 376
Query: 290 GSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY K++E ++ +RD W YTGD+ V G+++I DR KD+IISGGENISS EV
Sbjct: 377 HGVMKGYWKNEEATAATIRDG-WLYTGDMATVDEYGHIDIVDRKKDIIISGGENISSIEV 435
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAH 409
E LY +PA+ E A++A + WG+ P AFV ++ +EE +I F R +L H+ A
Sbjct: 436 EGALYEHPAVLEAAVIAVPHEKWGETPHAFVVVR--PGHTVSEEELIAFSREKLAHFKAI 493
Query: 410 KSVIIEDELPKTATGKIQKFVLR 432
V DELPKTA+GKIQK LR
Sbjct: 494 TGVTFVDELPKTASGKIQKVHLR 516
>gi|37527022|ref|NP_930366.1| hypothetical protein plu3135 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786455|emb|CAE15509.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 536
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/361 (39%), Positives = 212/361 (58%), Gaps = 8/361 (2%)
Query: 77 EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSY 136
E + +++N TSGT+ PK +V+ HRG+F+ ++S+++DW IP +P FLWTLPMFH NGW +
Sbjct: 179 EQEAISINVTSGTSGQPKLIVYSHRGVFLNSISNVLDWDIPKRPTFLWTLPMFHCNGWCF 238
Query: 137 SWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKI- 195
W + A GGT+IC+RK D +++ H VTH CGA +V L + + L KI
Sbjct: 239 PWAITARGGTHICMRKFDAEEAILLMQKHKVTHYCGAPIVHCALGTIARKQGLHFKEKIH 298
Query: 196 -LTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQ 254
L +GA P + +S+G V+ YG+TET G VV C KS W L+ + R + RQ
Sbjct: 299 GLVAGAPPTEMMFSLLDSIGIAVTQVYGMTETYGPVVVCEEKSDWEKLSKSVRISKRMRQ 358
Query: 255 GVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFY 314
G+ + + V+ TG+ V DG++ GE+V R G+++ Y D+ + + W +
Sbjct: 359 GIVSNLQGQVCVIEENTGLQVPFDGKTVGELVIR-GNMVASYDPDRHVT--LDAASQWLF 415
Query: 315 TGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGK 374
TGD+ VV +DGY+ I DR +D+IISGGENISS E+E++L P + A+VA+ D WG+
Sbjct: 416 TGDLAVVENDGYVRIVDRKRDIIISGGENISSLELENILSNYPGVLAAAVVAKPDSHWGE 475
Query: 375 RPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
P AF+ L E + TE + + + Y K LP+ A+GKI K LR++
Sbjct: 476 VPYAFIEL--EETSSVTEYELDNYICTVMARYKRPKGYTFL-TLPRNASGKIIKGQLRQL 532
Query: 435 V 435
+
Sbjct: 533 I 533
>gi|441517489|ref|ZP_20999225.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441455770|dbj|GAC57186.1| putative fatty-acid--CoA ligase [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 544
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 207/357 (57%), Gaps = 7/357 (1%)
Query: 81 MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGM 140
++LNYTSGTT PKGV++ HRG ++ ++ +++ +LWTLPMFH NGW W +
Sbjct: 179 ISLNYTSGTTGRPKGVMYTHRGAYLASLGNVVTQGFSIDTNYLWTLPMFHCNGWCGPWAL 238
Query: 141 AAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGA 200
AV GT++CLR V ++ +I + + GA VL L+++P P+ P+ I T+GA
Sbjct: 239 TAVAGTHVCLRAVRGDDMWRLIDGENINQMSGAPTVLTTLATAPEAHPMRTPMAIATAGA 298
Query: 201 SPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIG 260
P ++ LG + H YGLTET G C W+ L+ E + ARQGV +
Sbjct: 299 PPSPTIIKAIHHLGIEIVHVYGLTETYGPYAVCEPDPSWSELSADELSVRMARQGVGMLT 358
Query: 261 LADMDVVHPE----TGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTG 316
+ VV P+ + V DG GEIV R +M GY +D E ++ WF++G
Sbjct: 359 ADRLRVVLPDLVDGQLVDVAADGAQMGEIVMRGNVVMKGYYEDPERTAEAFA-GGWFHSG 417
Query: 317 DIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRP 376
D+GV+H DGY+++ DR+KDV+ISGGENIS+ EVE + +P + +VA++ D WG+RP
Sbjct: 418 DLGVMHPDGYVQLLDRAKDVVISGGENISTIEVEQAVVSHPEVADVAVIGVPDDKWGERP 477
Query: 377 CAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
A+V L +++ +I ++++ Y A + + ELPKT+TGKI+K LR+
Sbjct: 478 KAYVVLTE--GSTLSQDEVIAHVKSKIASYKAPREIEFVAELPKTSTGKIRKNELRD 532
>gi|189188536|ref|XP_001930607.1| long-chain-fatty-acid-CoA ligase [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187972213|gb|EDU39712.1| long-chain-fatty-acid-CoA ligase [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 588
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 163/458 (35%), Positives = 242/458 (52%), Gaps = 36/458 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL H +S + HS+ ++ D + L P P+L+ D AT
Sbjct: 129 RLKHDDISYIFQHSDVDMIIADTEFVGLLDDYRKERPH-----VPILVDTDTDATEGELS 183
Query: 65 G---------------HPNFKWVQPES----EWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G W ES E +AL YTSGTT+ PKGV + HRG+++
Sbjct: 184 GPFDDAVLEGLKYDIEQGGNGWAHLESQAKDEEHVIALAYTSGTTARPKGVEYTHRGVYL 243
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
+ ++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+ ++
Sbjct: 244 AAMGNVIESGLNYHTGRAKYLWTLPMFHATGWTFPWSVTAVRGTHYCLRKIDYPEIWRLL 303
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSY 221
K G+TH A V +L ++ + L +PV++ T ASPP+A L S L H Y
Sbjct: 304 KEEGITHFNAAPTVNTLLCAAKEAERLPQPVRV-TVAASPPSAWLFEQMSDLNLHPVHVY 362
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKH 277
GLTET G + +W+ L E+ ARQG I V+ E + V+
Sbjct: 363 GLTETYGPITKGYHMPEWDKLPIKEKYDRMARQGHGFITGKATRVIKTEQAPGVLIDVEK 422
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
+GQ GEI+F GY KD E ++ + + W +TGD+ V H DG ++I DR+KD+I
Sbjct: 423 NGQEIGEIIFEGNICAKGYYKDAE-ATRKLWEGGWLHTGDLAVWHPDGAIKILDRAKDII 481
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +E++L +P+I EV + A D WG+RP AFV+ K + + + +I+
Sbjct: 482 ISGGENISSVALEAMLSTHPSILEVGVCAVPDSHWGERPKAFVTTKDGTNSETLGQEVIQ 541
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + + +M + V++ ELPKT+TGKIQK VLRE
Sbjct: 542 WAKENSAISRFMVPREVVVVKELPKTSTGKIQKNVLRE 579
>gi|451847126|gb|EMD60434.1| hypothetical protein COCSADRAFT_98455 [Cochliobolus sativus ND90Pr]
Length = 587
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 167/458 (36%), Positives = 247/458 (53%), Gaps = 36/458 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL +S + HS+ ++ D + L P P+L+ D+ AT
Sbjct: 129 RLKPDDISYIFQHSDVDMIIADAEFVSLLDDYKKTKPD-----VPILVDTDMDATEGELS 183
Query: 65 G---------------HPNFKWVQPES----EWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G W ES E D +AL YTSGTT+ PKGV + HRG+++
Sbjct: 184 GPFDDAVLEGLKYDIEQGGKGWENLESHAKNEEDVIALAYTSGTTARPKGVEYTHRGVYL 243
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
+ ++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+ ++
Sbjct: 244 AAMGNIIESGLNYHSGRAKYLWTLPMFHATGWTFPWSVTAVRGTHYCLRKIDYPEIWRLL 303
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSY 221
K G+TH A V +L ++ + L PV++ T ASPP+A L S L H Y
Sbjct: 304 KEEGITHFNAAPTVNTLLCAAKEAERLPHPVRV-TVAASPPSAWLFEQMSNLNLNPVHVY 362
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE--TGM--SVKH 277
GLTET G + +W+TL D E+ ARQG I + V+ PE G+ +V+
Sbjct: 363 GLTETYGPITKGYHVPEWDTLPDKEKYSRMARQGHGFIVAKALRVIKPEQPAGILTNVEK 422
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
+G+ GEI+F GY KD E ++ + + W +TGD+ V H DG ++I DR+KD+I
Sbjct: 423 NGEEIGEIIFEGNICAKGYYKDAE-ATRKLWEGGWLHTGDLAVWHPDGAIQILDRAKDII 481
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +E++L +PAI EV + A D WG+RP AFV+ K + + +I+
Sbjct: 482 ISGGENISSVALEAMLSTHPAILEVGVCAVPDSHWGERPKAFVTTKDGSNSETLGAEVIQ 541
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + + +M + V++ ELPKT+TGKIQK VLRE
Sbjct: 542 WAKENSHISRFMVPREVVVVRELPKTSTGKIQKNVLRE 579
>gi|340793663|ref|YP_004759126.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
gi|340533573|gb|AEK36053.1| acyl-CoA synthetase [Corynebacterium variabile DSM 44702]
Length = 566
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 241/467 (51%), Gaps = 45/467 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL V + HS+ +LF + L L + S ++ VLIH+ + S P
Sbjct: 92 RLAPAEVRYICDHSDIHILFGEQD---LILNSRRTLGSAGLVDTFVLIHN--ADGSQPQP 146
Query: 65 GHPNF-----------KWVQPESEWD--------------PMALNYTSGTTSSPKGVVHC 99
HP+ + V E + D +A+NYTSGTT PKGVV+
Sbjct: 147 KHPDAGTVTTWDEFLDEGVHHEEDADDDTTFPFTVDDEDAAIAINYTSGTTGRPKGVVYT 206
Query: 100 HRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIY 159
HRG ++ + + V+LWTLPMFH +GW W AV T + LR V P ++
Sbjct: 207 HRGAYLNALGEVTTQDFTRDTVYLWTLPMFHCSGWCTGWAAMAVSATQVALRAVRGPEMW 266
Query: 160 SVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSH 219
+I GV+ +CGA VL+ L + + + + ++T+GA P V+ E+LG VV+H
Sbjct: 267 DLIDTEGVSAMCGAPAVLSTLVGADAAHQAEG-LSVVTAGAPPSPTVIEACENLGIVVTH 325
Query: 220 SYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG------- 272
YGLTE+ G C + W L RA+LKARQGV I AD VV
Sbjct: 326 VYGLTESYGPYTVCEPQPDWTDLPVAGRAKLKARQGVPMITNADARVVEAVPAGAPADTI 385
Query: 273 -MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKD 331
+ V DG + GEIV +M Y + + ++ WF++GD+ V H DGY++I D
Sbjct: 386 LIDVPADGVTMGEIVLGGNGVMKEYFHNPDATAEAFV-GGWFHSGDLAVKHPDGYIQILD 444
Query: 332 RSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWEL----- 386
R+KDV+ISGGENIS+ EVE + +PA+++VA++ D+ WG+R A+V L
Sbjct: 445 RAKDVVISGGENISTIEVEQAVISHPAVDDVAVIGVPDEKWGERLRAYVVLTPGTDISGD 504
Query: 387 SKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ E+++I+ CR ++ Y + + DELP+T+TGK++K LR+
Sbjct: 505 AAAKVEQSVIDHCRGQIAGYKVPRDYRVIDELPRTSTGKVRKNALRD 551
>gi|343429233|emb|CBQ72807.1| related to AMP-binding protein [Sporisorium reilianum SRZ2]
Length = 603
Score = 257 bits (656), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 151/382 (39%), Positives = 211/382 (55%), Gaps = 24/382 (6%)
Query: 74 PESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENG 133
P+ E P+AL YTSGTT PKGV+ HRG ++ V++ + I V+LW LPMFH G
Sbjct: 216 PQDEEQPIALCYTSGTTGRPKGVLTNHRGAYLAAVANAFEANITQDSVYLWVLPMFHACG 275
Query: 134 WSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPV 193
W++ W + A GT+ +RKVD +I+ + HHGVTH CGA V L++ P + L+R V
Sbjct: 276 WTFPWAVTASLGTHHTIRKVDNAVIWDALLHHGVTHYCGAPTVQIGLTNHPDARKLERRV 335
Query: 194 KILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKAR 253
+ + ++P A +L + ESL H YGLTET G ++ +W L RAR+ AR
Sbjct: 336 NVAVAASAPTANLLAKMESLNLHPVHVYGLTETYGPFTRRYFEPEWAQLDVDARARMMAR 395
Query: 254 QGVRTIGLADMDVVHPETG--------MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSL 305
QG ++ VV E+ + V+ +G GEIV R MLGY D +S
Sbjct: 396 QGHAYPTSDEVRVVRTESSTDKATDDLVDVERNGTETGEIVIRGNMAMLGYYNDPAATSK 455
Query: 306 CMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALV 365
+ WF+TGD+ V H G ++I DR KD+IISGGENISS VE L + + E ++
Sbjct: 456 AVMKG-WFHTGDLAVRHPGGEIQILDRGKDIIISGGENISSLMVEQELAAHADVLECCVI 514
Query: 366 AQRDKFWGKRPCAFVSL------KWELS--KKPTEEAIIEF-------CRARLPHYMAHK 410
A+ + WG+R AFV L K +L KK +A +E C+ R+ + +
Sbjct: 515 ARPHEKWGERGQAFVVLTEQAKAKLDLQEVKKNGSKANVELIATLKQHCKQRMSGFAVPE 574
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
I DELPKT+TGK+QK VLR
Sbjct: 575 WFDIVDELPKTSTGKVQKNVLR 596
>gi|347751425|ref|YP_004858990.1| AMP-dependent synthetase/ligase [Bacillus coagulans 36D1]
gi|347583943|gb|AEP00210.1| AMP-dependent synthetase and ligase [Bacillus coagulans 36D1]
Length = 530
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 243/444 (54%), Gaps = 32/444 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH---DDVSATSS 61
RL + +L+HS SK+LFVD + L + + ++IH DD +
Sbjct: 88 RLTPEDYRFILNHSGSKVLFVDQEMYHL----IEPVKDELETVEQIIIHYKEDDCAEIDY 143
Query: 62 PTVGHPNFKWVQ---PE-------SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
+W+ P+ E D +L YTSGTT +PKGV+ HR ++ +S++
Sbjct: 144 D-------RWLDRFPPDPFPRAGLDENDVCSLLYTSGTTGNPKGVMLTHRNNYLHALSAM 196
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
R+ ++ V+L LPMFH NGW + A G T++CLRK I++ I H VT +
Sbjct: 197 HHLRVTDRDVYLHVLPMFHVNGWGSPFYYTANGATHVCLRKPSAEAIFTEIIRHNVTVVH 256
Query: 172 GALVVLN-MLSSSPSTKP-LDRPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAG 228
A VLN +L + P +++ V+++ +GA+PP A + R E LG+ YG+TE+
Sbjct: 257 MAPTVLNSLLQYNAEHHPAIEQDVRVVIAGAAPPPAFVERVEKELGWEFIQVYGMTESTP 316
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ +SQ L + RL+A+ G IG +D+ V+ E V HDG+ GE+ R
Sbjct: 317 LTLVSVIRSQLGGLDRDTQLRLRAKAGFPMIG-SDVRVLR-ENDEEVAHDGREIGEVTVR 374
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+MLGY K+ E + +R N YTGD+ V GY++I DR KD+IISGGENISS E
Sbjct: 375 GHGVMLGYWKNPEETMKTIR-NGRLYTGDMATVDEYGYIDIVDRKKDIIISGGENISSIE 433
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE VLY +PA+ E A++A + WG+ P AFV K + + TEE II F R RL H+ A
Sbjct: 434 VEGVLYEHPAVLEAAVIAVPHEKWGETPHAFVVRKADAAA--TEEDIIRFSRERLAHFKA 491
Query: 409 HKSVIIEDELPKTATGKIQKFVLR 432
V DELPKTA+GKIQK LR
Sbjct: 492 VTGVTFVDELPKTASGKIQKVRLR 515
>gi|408399635|gb|EKJ78733.1| hypothetical protein FPSE_01101 [Fusarium pseudograminearum CS3096]
Length = 588
Score = 256 bits (653), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/369 (39%), Positives = 218/369 (59%), Gaps = 12/369 (3%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP-NQPVFLWTLPMFHE 131
Q SE D +A+ +TSGTTS PKGVV+ HRG ++ T++++++ + + +LWTLPMFH
Sbjct: 217 QARSEDDMLAIPFTSGTTSKPKGVVYTHRGSYLATMANIVESGLNIGRCKYLWTLPMFHA 276
Query: 132 NGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDR 191
GW++ W + AV GTN+CLRK+D P+I+ ++K G+TH A V +L ++ + L
Sbjct: 277 VGWTFPWAVVAVRGTNVCLRKIDYPLIWKLLKEEGITHFNAAPTVNTLLVAAKEAEKLPH 336
Query: 192 PVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARL 250
VK+ T ASPP L + L + H YG+TET G + C +W+ L TE+
Sbjct: 337 EVKV-TVAASPPTGYLFEQMTKLNLIPVHVYGMTETYGPITKCYTLPEWDNLPPTEKYAK 395
Query: 251 KARQGVRTIGLADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLC 306
+RQG I + ++ P+ + V DG+ GEIVF Y KD ++
Sbjct: 396 MSRQGHGFITSLPIRIIKPDQPQGVLIDVAKDGKEIGEIVFMGNICAKEYYKD-PAATRE 454
Query: 307 MRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVA 366
+ ++GD+ V H DG +I+DR+KD+IISGGENISS +ES+L +P I EV VA
Sbjct: 455 LFAGGVLHSGDLAVWHPDGSAQIQDRAKDIIISGGENISSVALESMLAQHPDILEVGAVA 514
Query: 367 QRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATG 424
D WG+RP +V++K K T + II++ + + + +M + V I DELPKT+TG
Sbjct: 515 VPDSHWGERPKVYVTVK--DGKSVTGDEIIQWAKHQSDISRFMVPREVEIVDELPKTSTG 572
Query: 425 KIQKFVLRE 433
KI+K VLRE
Sbjct: 573 KIKKNVLRE 581
>gi|259481194|tpe|CBF74495.1| TPA: AMP-binding enzyme, putative (AFU_orthologue; AFUA_5G04270)
[Aspergillus nidulans FGSC A4]
Length = 592
Score = 254 bits (649), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 167/462 (36%), Positives = 244/462 (52%), Gaps = 38/462 (8%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
+V RL ++ + HS+++++ D + PL A + P V++ D AT
Sbjct: 132 SVNYRLKEDDIAYIFTHSDAEIIIADKEYLPLLSAYRAAKPHVR-----VILDTDTDATE 186
Query: 61 SPTVG--------HPNFK-------WV----QPESEWDPMALNYTSGTTSSPKGVVHCHR 101
G N+ W Q SE D +AL YTSGTT+ PKGV + HR
Sbjct: 187 GQLAGPFDEAILEGLNYDRDTGRKGWSALESQAASEDDVIALAYTSGTTARPKGVEYTHR 246
Query: 102 GLFIITVSSLIDWRIPNQP---VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPII 158
G ++ + ++I+ + Q +LWTLPMFH GW++ W + AV GT+ CLRK+D P I
Sbjct: 247 GCYLAAMGNIIESGLNFQGRRCKYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPQI 306
Query: 159 YSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVV 217
+ ++K GVTH A V +L SSP +PL PV + T ASPP L + L
Sbjct: 307 WKLLKQEGVTHFNAAPTVNTLLCSSPEAEPLPEPVHV-TVAASPPTPHLFEQMTGLNLHP 365
Query: 218 SHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGM 273
H YG+TET G + + + W L E+ ARQG + + V+ E T +
Sbjct: 366 VHVYGMTETYGPITKGYYMTAWENLPRKEKFARMARQGHGFLTSLPVRVIQTEVPEGTII 425
Query: 274 SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRS 333
VK DG+ GEIVF GY KD E + ++GD+ V H DG ++I DR+
Sbjct: 426 DVKQDGKEIGEIVFVGNICARGYYKDPEATRKLFA-GGVLHSGDLAVWHPDGAIQILDRA 484
Query: 334 KDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEE 393
KD+IISGGENISS +ES+L +P I E +VA D WG+RP AFV++K ++ +
Sbjct: 485 KDIIISGGENISSVALESMLVTHPDILEAGVVAVPDSHWGERPKAFVTVK--PGRQLKGK 542
Query: 394 AIIEFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
++++ R + + +M + V + ELPKT+TGK++K VLRE
Sbjct: 543 DVVDWARNTSGISKFMVPREVEVVAELPKTSTGKLRKNVLRE 584
>gi|336112927|ref|YP_004567694.1| AMP-dependent synthetase and ligase [Bacillus coagulans 2-6]
gi|335366357|gb|AEH52308.1| AMP-dependent synthetase and ligase [Bacillus coagulans 2-6]
Length = 530
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 171/446 (38%), Positives = 244/446 (54%), Gaps = 36/446 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP--KPVLIH---DDVSAT 59
RL + +L+HS SK+LFVD + L + P L + ++IH DD +
Sbjct: 88 RLTPEDYRFILNHSGSKVLFVDQEMYHL------IEPVKDELETVEQIIIHYKEDDCAEI 141
Query: 60 SSPTVGHPNFKWVQ---PE-------SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVS 109
+W+ P+ E D +L YTSGTT +PKGV+ HR ++ +S
Sbjct: 142 DYD-------RWLDRFPPDPFPRAGLDENDVCSLLYTSGTTGNPKGVMLTHRNNYLHALS 194
Query: 110 SLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTH 169
++ R+ ++ V+L LPMFH NGW + A G T++CLRK I++ I H VT
Sbjct: 195 AMHHLRVTDRDVYLHVLPMFHVNGWGSPFYYTANGATHVCLRKPSAEAIFTEIIRHNVTV 254
Query: 170 ICGALVVLN-MLSSSPSTKP-LDRPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTET 226
+ A VLN +L + P +++ V+++ +GA+PP + + R E LG+ YG+TE+
Sbjct: 255 VHMAPTVLNSLLQYNAEHHPTIEQDVRVVIAGAAPPPSFVERVEKELGWEFIQVYGMTES 314
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
+ +SQ L ++ RL+A+ G IG +D+ V+ E V HDG+ GE+
Sbjct: 315 TPLTLVSVIRSQLGGLDHDKQLRLRAKAGFPMIG-SDVRVLR-ENDEEVAHDGKEIGEVT 372
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
R +MLGY K+ E + +R N YTGD+ V GY++I DR KD+IISGGENISS
Sbjct: 373 VRGHGVMLGYWKNPEETMKTIR-NGRLYTGDMATVDEYGYIDIVDRKKDIIISGGENISS 431
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHY 406
EVE VLY +P I E A++A + WG+ P AFV LK TEE II F R RL H+
Sbjct: 432 IEVEGVLYEHPDILEAAVIAVPHEKWGETPHAFVVLK--AGAAATEEDIIRFSRERLAHF 489
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLR 432
A V +ELPKTA+GKIQK LR
Sbjct: 490 KAVTGVTFVEELPKTASGKIQKVRLR 515
>gi|365157193|ref|ZP_09353474.1| hypothetical protein HMPREF1015_00884 [Bacillus smithii 7_3_47FAA]
gi|363625927|gb|EHL76938.1| hypothetical protein HMPREF1015_00884 [Bacillus smithii 7_3_47FAA]
Length = 530
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 249/442 (56%), Gaps = 26/442 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L+HSESK+LFVD L + + +++H S
Sbjct: 88 RLKPEDYLFMLNHSESKVLFVDQDLYHLIQPVKDRLAT----VEHIIVHYKDSDNEEFDY 143
Query: 65 GH-----PNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
P + +PE E D +L YTSGTT +PKGV+ HR ++ + S+ R+ +
Sbjct: 144 DRWLSMFPTNEIERPEIHEEDVCSLLYTSGTTGNPKGVMLTHRNNYLHALWSMHHLRVSD 203
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
+ L LPMFH NGW + A G T + LRKVD I+ +++ H VT + A VLN
Sbjct: 204 RDTLLHVLPMFHVNGWGSPFYFTANGATQVALRKVDAKTIFDLVQKHRVTIMEMAPTVLN 263
Query: 179 -MLSSSPSTKPL-DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
+L + P+ ++ V+++ +G++PP + + R E+ LG+ YG+TE+ +
Sbjct: 264 SLLQYNEKHHPIIEQDVRVVIAGSAPPPSFVKRVENELGWEFIQVYGMTESTPLHLVSTV 323
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+S + L E+ R++A+ G IG + VV+ E G V +G+ GE+V RS ++M G
Sbjct: 324 RSHLSHLPLEEQWRVRAKAGYPMIG-CRVKVVN-EHGEEVARNGKEIGELVIRSNAVMKG 381
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y K++E + +R N W +TGD+G + GY++I DR KD+IISGGENISS EVE VLY
Sbjct: 382 YWKNEEATMETIR-NGWLHTGDMGTIDEYGYIDIVDRKKDIIISGGENISSIEVEGVLYE 440
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP----TEEAIIEFCRARLPHYMAHKS 411
+PA+ E A++A + WG+ P AFV KKP TE+ +IEF R++L H+ A
Sbjct: 441 HPAVLEAAVIAVPHEKWGETPHAFV------VKKPNETVTEQELIEFSRSKLAHFKAITG 494
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V +ELPKTA+GKIQK +LR+
Sbjct: 495 VTFVEELPKTASGKIQKVLLRK 516
>gi|449547132|gb|EMD38100.1| hypothetical protein CERSUDRAFT_93621 [Ceriporiopsis subvermispora
B]
Length = 552
Score = 254 bits (648), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 165/458 (36%), Positives = 232/458 (50%), Gaps = 55/458 (12%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + V+ +L HS SKL+ VD++ L A + V+I +D + P
Sbjct: 120 RLTPQEVAYILDHSGSKLIIVDHEFKHLVQGAKAQ----------VIISNDTGRSGDPYE 169
Query: 65 GH-------------PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
G P +W + E P L YTSGTT PKGV+ RG ++ V++
Sbjct: 170 GFLSAGRKFSGEKGWPGLEWERDEEA--PSTLCYTSGTTGRPKGVITTLRGSYLAAVANA 227
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
+ I LPMFH +GW+Y W + I LR V P I++ + GVTH C
Sbjct: 228 YETGI---------LPMFHASGWTYPWAITLASALQITLRSVSYPHIWNHLLSSGVTHYC 278
Query: 172 GALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV 231
A V L ++P + L RPV + +G++P A ++ E +G H+YG
Sbjct: 279 AAPTVQIGLINAPQARRLPRPVTAIIAGSAPTAHLISELEKIGINPVHTYGP------CT 332
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP--ETGM------SVKHDGQSQG 283
C + W +L+ RA+ ARQGV + + VV+P E G+ V DG + G
Sbjct: 333 KCYGQPSWASLSLENRAKHIARQGVSFLTADETRVVYPPKEGGLLDSELVDVPKDGNTMG 392
Query: 284 EIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
EIV R +M Y +D E + R ++ +GD+ V+H DGY+EI+DRSKD+IISGGEN
Sbjct: 393 EIVMRGNIVMKEYFRDPEATRKAFRGG-YYNSGDLAVMHPDGYIEIQDRSKDIIISGGEN 451
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL------KWELSKKPTEEAIIE 397
SS +E L +P I EV++VA+ WG+RP AFV L KW E + +
Sbjct: 452 ASSLAIEQELSSHPDILEVSVVARPHPKWGERPMAFVILHPQKLDKWTGKYDEFENDLKK 511
Query: 398 FCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIV 435
R RLP + + V + DELPKTATGKIQK VLR+ V
Sbjct: 512 HARVRLPGFACPEWVKVVDELPKTATGKIQKIVLRKAV 549
>gi|342885826|gb|EGU85778.1| hypothetical protein FOXB_03626 [Fusarium oxysporum Fo5176]
Length = 588
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 215/369 (58%), Gaps = 12/369 (3%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP-NQPVFLWTLPMFHE 131
Q SE D +A+ +TSGTTS PKGVV+ HRG ++ ++++I+ + + +LWTLPMFH
Sbjct: 217 QARSEDDMLAIPFTSGTTSRPKGVVYTHRGAYLAAMANIIESGLNIGRCKYLWTLPMFHA 276
Query: 132 NGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDR 191
GW++ W + AV GTN+CLRK+D P+I+ ++K G+TH A V +L ++ + L +
Sbjct: 277 IGWTFPWSVVAVRGTNVCLRKIDYPLIWKLLKEEGITHFNAAPTVNTLLVAAREAERLPQ 336
Query: 192 PVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARL 250
VK+ T ASPP L + L + H YG+TET G + C +W+ L E+
Sbjct: 337 EVKV-TVAASPPTGYLFEQMTKLNLMPVHVYGMTETYGPITKCYILPEWDDLPPQEKFAK 395
Query: 251 KARQGVRTIGLADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLC 306
+RQG I + V+ P+ + V DG+ GEIVF GY KD E +
Sbjct: 396 MSRQGHGFITSQPIRVIKPDQPQGVLIDVAKDGKEVGEIVFIGNICAKGYYKDPEATRQL 455
Query: 307 MRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVA 366
++GD+ V H DG +I+DR+KD+IISGGENISS +ES+L +P I E VA
Sbjct: 456 FA-GGVLHSGDLAVWHPDGSAQIQDRAKDIIISGGENISSVALESMLAQHPDILEAGAVA 514
Query: 367 QRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATG 424
D WG+RP ++++K K T E +I + + + + +M + V + DELPKT+TG
Sbjct: 515 VPDSHWGERPKVYITVK--DGKSVTGEEVISWAKHQSDISKFMVPREVEVVDELPKTSTG 572
Query: 425 KIQKFVLRE 433
KI+K VLRE
Sbjct: 573 KIKKNVLRE 581
>gi|440640147|gb|ELR10066.1| hypothetical protein GMDG_04467 [Geomyces destructans 20631-21]
Length = 576
Score = 253 bits (647), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 246/459 (53%), Gaps = 43/459 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT---SS 61
RL + ++ + +H+E +++ VD + L L+P P +I D A S
Sbjct: 118 RLKSEDIAYIFNHAEVEVIIVDAEYLHLLDRFKELYPQ-----IPFIIDTDTDAVEEISG 172
Query: 62 P--------------TVGHPNFKWV----QPESEWDPMALNYTSGTTSSPKGVVHCHRGL 103
P T G+ W Q + E +AL YTSGTT+ PKGVV+ HRG
Sbjct: 173 PFDAAVLEGLSYDKETGGN---GWAGLKSQCDDEQATIALAYTSGTTAKPKGVVYNHRGA 229
Query: 104 FIITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYS 160
++ ++++++ + + +LWTLPMFH GW++ W + AV GT+ C+RK+D P I+
Sbjct: 230 YLAALANVVESGLNYHTGRCGYLWTLPMFHAMGWTFPWAVTAVRGTHYCMRKIDYPAIWH 289
Query: 161 VIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRT-ESLGFVVSH 219
++K VTH A V +L +SP + L++PV++ T ASPP A L +T ESL + H
Sbjct: 290 LLKTENVTHFNAAPTVNTLLCASPEAERLEKPVRV-TVAASPPTAHLFKTMESLNLMPVH 348
Query: 220 SYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSV 275
YGLTET G + W L + E+ ARQG I V+ E + V
Sbjct: 349 VYGLTETYGPITKGYRMPAWENLPENEKYDKMARQGHGAITTLPCRVIKTEQAPGIIVDV 408
Query: 276 KHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKD 335
K DG+ GEIVF Y KD E + D ++GD+ V H+DG ++I DR+KD
Sbjct: 409 KKDGKEIGEIVFLGNICAKEYYKDPEATRKIF-DGGVLHSGDLAVWHADGAIQILDRAKD 467
Query: 336 VIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAI 395
+IISGGENISS +E +L +P + E +VA D WG+RP AFV++ + K + +
Sbjct: 468 IIISGGENISSVSLEGMLVQHPDVLEAGVVAVPDSHWGERPKAFVTV--QQGKTLKGDDV 525
Query: 396 IEFCRAR--LPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
I++ + + + +M + V I ELPKT+TGK++K VLR
Sbjct: 526 IQWAKHKSDISKFMVPREVEIVAELPKTSTGKVKKNVLR 564
>gi|353235870|emb|CCA67876.1| related to AMP-binding protein [Piriformospora indica DSM 11827]
Length = 561
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/454 (35%), Positives = 235/454 (51%), Gaps = 39/454 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L HS +KL+ VD++ + L P PV++ D P
Sbjct: 117 RLVKSDIEYILSHSGAKLVLVDHEYAGLV----------KDCPVPVIVSRDTGRAGDP-- 164
Query: 65 GHPNF-----------KWVQPESEWDPMA---LNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ F W + E + A LNYTSGTT PKGV+ RG ++ +S+
Sbjct: 165 -YETFLSEGRRFSRERGWAGLQLEEEETANATLNYTSGTTGRPKGVMATLRGSYLAAISN 223
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+ ++ V+LW LPMFH +GW+Y W + + +R VD I+ + GVTH
Sbjct: 224 AYESKLNINSVYLWVLPMFHASGWTYPWALTFAMAKQVTIRTVDYKAIWGHFLYSGVTHY 283
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA V + +SP K L P+ + +GA+P AA+L E+L F V+H YGLTET G
Sbjct: 284 CGAPTVQISIVNSPEAKRLKTPITAVIAGAAPTAALLEALENLNFQVNHVYGLTETYGPF 343
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVH-PETGMS----VKHDGQSQGEI 285
+ ++ +L ERAR+ +RQG ++ VV E G + D GEI
Sbjct: 344 TRNYDRPEYKSLGLEERARILSRQGHAFAQADEVRVVQIDEEGKRKPGLIDCDFMQPGEI 403
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
V R +M Y +D + + R +F TGD+ V DG + I+DRSKD+IISGGEN S
Sbjct: 404 VTRGNIVMKEYYRDPKATEEAFR-GGYFATGDVAVKFPDGSISIRDRSKDLIISGGENAS 462
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL------KWELSKKPTEEAIIEFC 399
S +E L ++P + EV++VA++ + WG+R AFV L KW+ + ++ +I F
Sbjct: 463 SLAIEQELSLHPDVLEVSVVARKHEKWGERAMAFVILHQEAVQKWKGREDEFQKDLINFV 522
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ +LP + V ELPKT+TGKIQK VLR+
Sbjct: 523 KGKLPGFAQPAWVECVSELPKTSTGKIQKTVLRQ 556
>gi|389751492|gb|EIM92565.1| acetyl-CoA synthetase-like protein [Stereum hirsutum FP-91666 SS1]
Length = 986
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 238/468 (50%), Gaps = 53/468 (11%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL V+ +L HS S+++FVD++ + L A + ++I D P
Sbjct: 525 RLTKPEVAYILEHSGSRIIFVDHEYAHLVQGAKAR----------IIICKDTGRAGCP-- 572
Query: 65 GHPNF-----------KWVQPESEWD---PMALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ +F W E + D P++LNYTSGTT PKGV+ RG ++ +++
Sbjct: 573 -YEDFLSSGRRFSKERGWAGLEMDADENKPLSLNYTSGTTGRPKGVLTTLRGSYLAAMAN 631
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+++ ++ +LW LPMFH GW++ W + T I LR VD +I+ H VTH
Sbjct: 632 VMESQMNIDSTYLWILPMFHAAGWTFPWAITCAFATQITLRTVDYSLIWKHFLHSKVTHY 691
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA V + + P + L + V + +GA+P A +L E G H YGLT+T G
Sbjct: 692 CGAPTVQIGIVNHPDARRLPQTVTAVIAGAAPTAHLLGELEQKGIQPVHVYGLTQTYGPF 751
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGM----------------- 273
+ W +L +ERA+L ARQG + VV+ + +
Sbjct: 752 TRNYPQPHWPSLPLSERAKLAARQGHTFTTSHPLRVVYLSSDLPSDTEPHKHPHQHPHGA 811
Query: 274 --SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKD 331
V DG++ GEIV R M GY D+E + + WF+TGD+ V H DG + I+D
Sbjct: 812 LVDVPKDGKTIGEIVMRGNIAMHGYFMDEEATKRAFK-GGWFHTGDLAVWHEDGSIAIQD 870
Query: 332 RSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT 391
RSKD+IISGGEN SS +E L +P + EV++V + WG+RP AFV L E +K+ +
Sbjct: 871 RSKDIIISGGENASSLAIEQELASHPDVLEVSVVGREHPKWGERPMAFVLLHAEPAKQWS 930
Query: 392 ------EEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
E + + R RLP + + V++ DELPKT+TGKI K LR+
Sbjct: 931 GRHHHFAEELKKHARERLPGFATPEWVVVVDELPKTSTGKILKTTLRK 978
>gi|380495598|emb|CCF32273.1| AMP-binding enzyme [Colletotrichum higginsianum]
Length = 574
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 217/371 (58%), Gaps = 14/371 (3%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI---PNQPVFLWTLPMF 129
Q ++E D +A+ +TSGTTS PKGVV+ HRG ++ V ++I+ + + +LWTLPMF
Sbjct: 201 QCDNEDDMLAIPFTSGTTSRPKGVVYTHRGAYLAAVGNVIESGLNYHTGRCKYLWTLPMF 260
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPL 189
H GW++ W + AV GT++CLRK+D P+I+ ++K GVTH A V +L S+ + L
Sbjct: 261 HAVGWTFPWAVTAVRGTHVCLRKIDYPLIWKLLKEEGVTHFNAAPTVNTLLCSAKEAEKL 320
Query: 190 DRPVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERA 248
V++ T ASPP+A L + +L H YGLTET G + W TL +E+
Sbjct: 321 PHEVRV-TVAASPPSAHLFEQMTNLNLFPVHVYGLTETYGPITKGYHMPSWETLPASEKY 379
Query: 249 RLKARQG---VRTIGLADMDVVHPETGM-SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
ARQG V ++ + + PE + V DG+ GEIVF GY KD E +
Sbjct: 380 AKMARQGHGFVTSLPIRIVKTDQPEGVLVDVAKDGKEIGEIVFLGNICAKGYYKDAEATK 439
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
D ++GD+ V H DG +I DR+KD+IISGGENISS +E +L +P + E A+
Sbjct: 440 KLF-DRGALHSGDLAVHHPDGSAQILDRAKDIIISGGENISSVALEGMLIQHPDLMEAAV 498
Query: 365 VAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTA 422
VA D WG+RP A+V++K K E +I + R + + +M + V + DELPKT+
Sbjct: 499 VAVPDSHWGERPKAYVTIKE--GKSLEGEDLIAWARNQSNISKFMVPREVEVVDELPKTS 556
Query: 423 TGKIQKFVLRE 433
TGK++K VLRE
Sbjct: 557 TGKLKKNVLRE 567
>gi|448630449|ref|ZP_21673104.1| medium-chain acyl-CoA ligase [Haloarcula vallismortis ATCC 29715]
gi|445756372|gb|EMA07747.1| medium-chain acyl-CoA ligase [Haloarcula vallismortis ATCC 29715]
Length = 533
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/441 (36%), Positives = 227/441 (51%), Gaps = 21/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP-KPVLIHDDVSATSSPT 63
RLD ++ +L+ E+ + DY + P+ T + KP I + A S
Sbjct: 89 RLDPAKIEYILNDCEASTVIADYDFAEKVQPVRDDIPAETFIGYKPDRIDGEWDAYSDIL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
G P + +P+ +E D ++NYTSGTT PKGVV HR + I + +
Sbjct: 149 DGQPTAEPDRPQVAEGDDASINYTSGTTGDPKGVVRTHRTESWHALVLNQHMEIRDDDTY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW +++ + GGT++C R D + ++ + V+ +CGA VLN L
Sbjct: 209 LWTLPMFHCNGWGHTYAITGTGGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQ 268
Query: 181 ----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
+ DR V+I T+G++P A + R E G+ + H YGLTETA + +
Sbjct: 269 HYRANDGDIVTQGDRDVRIATAGSAPATATIERVEDEFGWRIIHIYGLTETAPIITTSNS 328
Query: 236 KSQWNTLADTERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+ ER R LK +QG T+ D+ VV E G V HDG + GEIV + +M
Sbjct: 329 PRRI-----AERGRELKVKQGSETL-CTDIRVVD-EDGNDVPHDGSAIGEIVVQGNQVMD 381
Query: 295 GYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
YL E + D +F+TGD+ DG ++I DR KD+IISGGENISS E+E
Sbjct: 382 RYLNKPEITEEAFNDRVEGYFHTGDLATWDEDGMVQIMDRRKDIIISGGENISSIELEDE 441
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P + + A++ + WG+ P A V TE+ I+EF R RL Y V
Sbjct: 442 LYDHPDVLKAAVIPAPSEDWGETPMAIVVPT--ADSDATEQEILEFLRERLASYKVPTGV 499
Query: 413 IIEDELPKTATGKIQKFVLRE 433
D LP+TATGKIQK+ LRE
Sbjct: 500 DFRDSLPETATGKIQKYELRE 520
>gi|448403242|ref|ZP_21572222.1| long-chain-fatty-acid--CoA ligase [Haloterrigena limicola JCM
13563]
gi|445664710|gb|ELZ17415.1| long-chain-fatty-acid--CoA ligase [Haloterrigena limicola JCM
13563]
Length = 536
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 150/392 (38%), Positives = 214/392 (54%), Gaps = 25/392 (6%)
Query: 54 DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
D+V A + PT P E D + +NYTSGTT PKGV+ HRG I S +
Sbjct: 145 DEVLADTEPTYDRPEM------DEEDIITINYTSGTTGDPKGVMRNHRGETIHAYCSSVH 198
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
I + V+LWTLPMFH NGW + + + +GGT++C R VD ++ I+ V++ C A
Sbjct: 199 RDISDDDVYLWTLPMFHVNGWGHVFSITGIGGTHVCTRGVDAGDVFETIQEEDVSYFCAA 258
Query: 174 LVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETA 227
VLNML + P T D V++ T+G++PP A + E G+ ++H YG TET
Sbjct: 259 PTVLNMLLDYYDENEPVTTG-DNDVRVATAGSAPPEATIRTVEDEFGWELAHVYGATETG 317
Query: 228 GFVVSCAWKSQWNTLADTERAR--LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
+ + S+ N + ++AR +K RQG+ +G ++ VV + G V D + GEI
Sbjct: 318 PLIAT----SEVNRFLEDDQARYDIKKRQGIPMLG-TEIRVVD-DDGNEVPWDDATIGEI 371
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
V R IM GY ++ E + D WF+ GD+ V +G + I+DR KD+IISGGEN
Sbjct: 372 VVRGNQIMEGYWENPEETERAFNDRLEGWFHMGDLATVDENGMIAIQDRKKDIIISGGEN 431
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRA 401
ISS E+E LY +P + EVA++ WG+ P AF+ P T E II+F R
Sbjct: 432 ISSIELEDTLYEHPEVAEVAVIPSPSDQWGETPKAFIVPANGDPTDPGVTAEEIIDFTRE 491
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
L Y + V +LP TATGK++K+ LRE
Sbjct: 492 NLASYKVVRRVEFVKQLPTTATGKVEKYELRE 523
>gi|255561363|ref|XP_002521692.1| AMP dependent ligase, putative [Ricinus communis]
gi|223539083|gb|EEF40679.1| AMP dependent ligase, putative [Ricinus communis]
Length = 428
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/451 (33%), Positives = 238/451 (52%), Gaps = 64/451 (14%)
Query: 6 LDHKRVSVLLHHSESKLLFVDYQSSPLALAALS-LFPSNTILPKPVLIHDDVSATSSP-- 62
L HK+V+ L + + L+ + S P+A A LS L P+ +LI+D +S
Sbjct: 10 LLHKQVATLAPNVPA--LYELHFSVPMAGAVLSTLNTRKGNPPQLILINDKCEQETSSMT 67
Query: 63 ---------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIIT 107
T+G +F+ ++P +E DP+++NYTSG+T +PKGVV+ HR ++ +
Sbjct: 68 NNYKSPCHLDYDSLLTMGKADFEVIKPNNECDPISVNYTSGSTGNPKGVVYSHRAAYLNS 127
Query: 108 VSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGV 167
++ + + PVFLWT+ MF NGW +W MAA+GGTN+C+R V +I I H
Sbjct: 128 LAEIFRCDMRRMPVFLWTVDMFRCNGWCLTWAMAAIGGTNVCIRNVSAKVISDAILLHKP 187
Query: 168 THICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETA 227
+ + PS K V ++ +GA + +L + E LGF V+ YG+TE
Sbjct: 188 S---------DEHRQIPSKK-----VNVIVAGALLNSQILKKVEELGFNVADGYGMTEVL 233
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
G + WK L E+ ++K+ +G+ I + +DV P T SV HDG++ GE++F
Sbjct: 234 GPAIVRPWK-----LESDEQEKIKSSEGLHNILIEGVDVKDPNTMKSVPHDGKTVGEVMF 288
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
RS +M GY + E + W++T D+G+ H DG +++KDR+KD+I++ GE IS+
Sbjct: 289 RSNILMSGYFNNVEATQEAF-SGGWYHTKDLGIRHPDGSIQMKDRAKDIIVTEGETISTL 347
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
EVE+ L +P + E A+V + D EF A+LP YM
Sbjct: 348 EVEAALLSHPKVLEAAVVGKSDVVLN-----------------------EFIGAQLPDYM 384
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREIVNAV 438
K+++ D LP GK+QKFVLRE NA+
Sbjct: 385 VPKTIVFGD-LPVNFNGKVQKFVLREKANAI 414
>gi|212640043|ref|YP_002316563.1| acyl-CoA synthetase [Anoxybacillus flavithermus WK1]
gi|212561523|gb|ACJ34578.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Anoxybacillus
flavithermus WK1]
Length = 542
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/437 (36%), Positives = 246/437 (56%), Gaps = 18/437 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH---DDVSATSS 61
RL +L+HSESK+LFVDY+ L ++ + +++H DD+ +
Sbjct: 100 RLKPDDYVFILNHSESKVLFVDYELYHL----IAPIKDELQTIEYIIVHGKTDDIHEIAY 155
Query: 62 PT--VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
T + + +P+ E D +L YTSGTT +PKGV+ HR ++ +S++ R+ +
Sbjct: 156 DTWLAQYTKEPFERPDIDENDVCSLLYTSGTTGNPKGVMLTHRNNYLHALSTMHHLRVSD 215
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
+ V+L LPMFH NGW + A G T++CLRK I+ + + VT + A VLN
Sbjct: 216 RDVYLHILPMFHVNGWGAPFYYTANGATHVCLRKAIPETIFEYVNQYKVTVMHMAPTVLN 275
Query: 179 MLSS--SPSTKPLDRPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCAW 235
L ++ V+++ +G++PP A + R E LG+ YG+TE++
Sbjct: 276 TLLQYYEQHVPTIEHDVRVVIAGSAPPPAFVTRVEKELGWEFIQVYGMTESSPLSTVSTI 335
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ + L +++ R+KA+ G IG ++ VV E G V DG++ GE++ RS +M G
Sbjct: 336 RAHLDHLPLSDQYRMKAKAGYAMIG-CEVKVV-DEHGEQVPRDGKTIGEVIVRSNGVMAG 393
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y K+ E + +R N W +TGD+ + + G ++I DR KD+IISGGENISS EVE VLY
Sbjct: 394 YWKNPEATMETIR-NGWLHTGDMATIDAYGNIDIVDRKKDIIISGGENISSIEVEGVLYE 452
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PA+ E A++A + WG+ P AFV ++ K+ TE+ +I F R +L H+ A V
Sbjct: 453 HPAVLEAAVIAVPHEKWGETPHAFVVVR--PGKEVTEQELIAFSREKLAHFKAITGVTFV 510
Query: 416 DELPKTATGKIQKFVLR 432
ELPKTA+GKIQK LR
Sbjct: 511 QELPKTASGKIQKVHLR 527
>gi|170084069|ref|XP_001873258.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650810|gb|EDR15050.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 546
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 165/454 (36%), Positives = 232/454 (51%), Gaps = 34/454 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL + V+ +L HS S+L+ VDY+ + LA SN I PV+I +D P
Sbjct: 101 RLKPQEVTYILEHSGSRLILVDYEYAHLAQ-------SNKI---PVIISNDTGRDGDPYE 150
Query: 63 ---TVGH---PNFKWVQPESEWDPMA---LNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
T G W ++E D A L YTSGTT PKGVV RG ++ +++ +
Sbjct: 151 SFLTDGRRFSEEKGWAGLDAEPDENAAAVLCYTSGTTGRPKGVVTTLRGSYLAAIANAFE 210
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
++ +LW LPMFH GW++ W T + LR VD I++ + H VTH CGA
Sbjct: 211 AQMNQDSTYLWILPMFHAAGWTFPWANVFAFATQVTLRTVDYSYIWNHLLHSAVTHYCGA 270
Query: 174 LVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
V + + P + L +PV + +GA+P ++ E G H YGLTET G
Sbjct: 271 PTVQIGIYNHPLARRLPKPVTAIIAGAAPTPHLISELEKKGIKPVHVYGLTETYGPFTRN 330
Query: 234 AWKSQWNTLADTERARLKARQG--VRTIGLADMDVVHPETG----MSVKHDGQSQGEIVF 287
++ W ++ +RARL ARQG T G + VH E V DG++ GEIV
Sbjct: 331 YEQASWAAMSLEDRARLMARQGHAFATAGEVRVVYVHGENEDRPLKDVPRDGKTLGEIVT 390
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R +M Y +D E + R F +GD+ V+H DG + I DRSKD+IISGGEN SS
Sbjct: 391 RGNIVMKEYFRDPEATKKAFRGGS-FRSGDLAVMHPDGSVAIMDRSKDIIISGGENASSL 449
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL------KWELSKKPTEEAIIEFCRA 401
+E L +P + EV++VA+ WG+RP AFV L W E + + +
Sbjct: 450 AIEQELASHPHVLEVSVVAREHPKWGERPMAFVILHPQHASHWHGRHHEFERDLKQHAKP 509
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLREIV 435
RLP + + V + ELPKT+TGKI K LR++V
Sbjct: 510 RLPGFACPEWVEVVPELPKTSTGKILKTELRKVV 543
>gi|226288712|gb|EEH44224.1| 2-succinylbenzoate-CoA ligase [Paracoccidioides brasiliensis Pb18]
Length = 582
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 247/457 (54%), Gaps = 38/457 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + ++ + +HSE++ + VD + PL + +P P++I D A
Sbjct: 124 RLKPEDIAYIFNHSEAEAIIVDQEFLPLLVEFRKTYPH-----IPLIIDTDTDAIEGELS 178
Query: 65 GH--------PNFKWVQPESEWDPM-----------ALNYTSGTTSSPKGVVHCHRGLFI 105
G NF W+ + AL+YTSGTTS PKGV + HR ++
Sbjct: 179 GQFDQAVLEGLNFDTASGSHGWEGLNAQTADEDALIALSYTSGTTSRPKGVEYIHRSCYL 238
Query: 106 ITVSSLIDWRIP---NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
T++++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P+I+ ++
Sbjct: 239 ATLANIIESGLNYNRGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPLIWKLL 298
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSY 221
K G+TH C A V +L SS + L PV++ T ASPP L + +L H Y
Sbjct: 299 KEEGITHYCAAPTVNTILCSSKEAEMLPSPVRV-TVAASPPTPHLFEQMTNLNLHPVHVY 357
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVKH 277
GLTET G + + +W+T+ + ++ ARQG + + V+ E T + V+
Sbjct: 358 GLTETYGPITKGYYLPEWDTIPEQDKYERMARQGYGFLTSLPVRVIKTEVPEGTIIDVEK 417
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
+G+ GEIVF GY K+ E + ++GD+ V H DG ++I DR+KD+I
Sbjct: 418 NGKEIGEIVFVGNICAKGYYKNVEETKKLF-SGGVLHSGDLAVWHPDGSIKILDRAKDII 476
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +ES+L +P I E +VA D WG+RP AF+++K K+ + +IE
Sbjct: 477 ISGGENISSIALESMLVTHPDILEAGVVAVPDSHWGERPKAFITVK--SGKQLGGKDVIE 534
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
+ + + + +M + V + ELPKT+TGK++K VLR
Sbjct: 535 WAKHVSGISRFMVPREVEVVPELPKTSTGKVKKNVLR 571
>gi|225681569|gb|EEH19853.1| 2-succinylbenzoate-CoA ligase [Paracoccidioides brasiliensis Pb03]
Length = 587
Score = 252 bits (643), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 154/456 (33%), Positives = 245/456 (53%), Gaps = 36/456 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + ++ + +HSE++ + VD + PL + +P P++I D A
Sbjct: 124 RLKPEDIAYIFNHSEAEAIIVDQEFLPLLVEFRKTYPH-----IPLIIDTDTDAIEGELS 178
Query: 65 GH--------PNFKWVQPESEWDPM-----------ALNYTSGTTSSPKGVVHCHRGLFI 105
G NF W+ + AL+YTSGTTS PKGV + HR ++
Sbjct: 179 GQFDQAVLEGLNFDTASGNHGWEGLNAQTADEDALIALSYTSGTTSRPKGVEYIHRSCYL 238
Query: 106 ITVSSLIDWRIP---NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
T++++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P+I+ ++
Sbjct: 239 ATLANIIESGLNYNRGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPLIWKLL 298
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
K G+TH C A V +L SS + L PV++ + + P + + +L H YG
Sbjct: 299 KEEGITHYCAAPTVNTILCSSKEAEMLPSPVRVTVAASPPTPHLFEQMTNLNLHPVHVYG 358
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVKHD 278
LTET G + + +W+T+ + ++ ARQG + + V+ E T + V+ +
Sbjct: 359 LTETYGPITKGYYLPEWDTIPEQDKYERMARQGYGFLTSLPVRVIKTEVPEGTIIDVEKN 418
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
G+ GEIVF GY K+ E + ++GD+ V H DG ++I DR+KD+II
Sbjct: 419 GKEIGEIVFVGNICAKGYYKNVEETKKLF-SGGVLHSGDLAVWHPDGSIKILDRAKDIII 477
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ES+L +P I E +VA D WG+RP AF+++K K+ + +IE+
Sbjct: 478 SGGENISSIALESMLVTHPDILEAGVVAVPDSHWGERPKAFITVK--SGKQLGGKDVIEW 535
Query: 399 CR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
+ + + +M + V + ELPKT+TGK++K VLR
Sbjct: 536 AKHVSGISRFMVPREVEVVPELPKTSTGKVKKNVLR 571
>gi|367026838|ref|XP_003662703.1| hypothetical protein MYCTH_2303657 [Myceliophthora thermophila ATCC
42464]
gi|347009972|gb|AEO57458.1| hypothetical protein MYCTH_2303657 [Myceliophthora thermophila ATCC
42464]
Length = 586
Score = 251 bits (642), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 219/368 (59%), Gaps = 12/368 (3%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID--WRIPN-QPVFLWTLPMFHEN 132
+E D +A+ +TSGTTS PKGV++ HRG ++ ++++++ +P+ + +LWTLPMFH
Sbjct: 208 NEDDMLAIPFTSGTTSKPKGVIYTHRGAYLAAMANIVESGLNVPDGRCKYLWTLPMFHAV 267
Query: 133 GWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRP 192
GW++ W + AV GT++CLRKVD +I+ ++K GVTH A V +L + + L RP
Sbjct: 268 GWTFPWSVCAVRGTHVCLRKVDYALIWRLLKEEGVTHFNAAPTVNTLLCAHKDAEVLPRP 327
Query: 193 VKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLK 251
V++ T ASPP A L + +L + H YGLTET G + +W++L E+
Sbjct: 328 VRV-TVAASPPTAHLFEQMTNLNLLPVHVYGLTETYGPITRGYLLPEWDSLPRHEKFANM 386
Query: 252 ARQGVRTIGLADMDVV---HPETGM-SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCM 307
ARQG + V+ PE + V DG+ GEIVF GY KD E +
Sbjct: 387 ARQGHGFLTALPARVIKADQPEGVLIDVARDGKEMGEIVFSGNICCKGYYKDPEATRKLF 446
Query: 308 RDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQ 367
++GD+ V H DG ++I+DR+KD+IISGGENISS +ES+L +PAI E +VA
Sbjct: 447 -AGGVLHSGDLAVWHPDGSIQIQDRAKDIIISGGENISSVALESMLVEHPAILEAGVVAV 505
Query: 368 RDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR--LPHYMAHKSVIIEDELPKTATGK 425
D WG+RP A+V++K S + +IE+ R + + +M + V I ELPKT+TGK
Sbjct: 506 PDSHWGERPKAYVTVKEGSSTTLRGQEVIEWARNQSAISKFMVPREVEIVRELPKTSTGK 565
Query: 426 IQKFVLRE 433
I+K VLRE
Sbjct: 566 IKKNVLRE 573
>gi|85078537|ref|XP_956182.1| hypothetical protein NCU00129 [Neurospora crassa OR74A]
gi|28917234|gb|EAA26946.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 573
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 211/366 (57%), Gaps = 10/366 (2%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI---PNQPVFLWTLPMFHEN 132
+E D +A+ +TSGTTS PKG V+ HRG ++ T++++I+ + + +LWTLPMFH
Sbjct: 199 NEDDMIAIPFTSGTTSKPKGCVYTHRGAYLATLANVIESGLNVADGRSKYLWTLPMFHAM 258
Query: 133 GWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRP 192
GW++ W + AV GT++CLRK+D P+I+ ++K GVTH C A V +L ++ + L +P
Sbjct: 259 GWTFPWAVCAVRGTHVCLRKIDYPLIWKLLKEEGVTHFCAAPTVNTLLCAAKEAEALPKP 318
Query: 193 VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKA 252
V++ + + P + + SL H YGLTET G + W+ L ++ A
Sbjct: 319 VRVTVAASPPTPHLFEQMTSLNLFPVHVYGLTETYGPITRGYILPSWDNLPPHDKYAKMA 378
Query: 253 RQGVRTIGLADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMR 308
RQG I ++ P+ + V+ +GQ GEI+F GY KD E +
Sbjct: 379 RQGHGFITSLPARIIKPDQPEGVLIDVEKNGQEVGEIIFTGNICCKGYYKDPEATRKLFA 438
Query: 309 DNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQR 368
+TGD+ V H DG + I+DR+KD+IISGGENISS +ES+L +P I E +VA
Sbjct: 439 -GGMLHTGDLAVWHPDGSIHIQDRAKDIIISGGENISSVALESMLAEHPDILEAGVVAVP 497
Query: 369 DKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATGKI 426
D WG+RP A+++LK T + +I++ + + + +M + V I ELPKT+TGKI
Sbjct: 498 DSHWGERPKAYITLKEGRETSLTGQDVIDWAKHNSSISKFMVPREVEIVKELPKTSTGKI 557
Query: 427 QKFVLR 432
+K LR
Sbjct: 558 KKNELR 563
>gi|169622966|ref|XP_001804891.1| hypothetical protein SNOG_14709 [Phaeosphaeria nodorum SN15]
gi|160704884|gb|EAT77901.2| hypothetical protein SNOG_14709 [Phaeosphaeria nodorum SN15]
Length = 585
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 247/458 (53%), Gaps = 36/458 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT----S 60
RL H +S + H++ ++ D++ L P P+L+ +D AT S
Sbjct: 126 RLKHDDISYIFQHADVDMIIADFEFVGLLDEYRKERPG-----VPILVDNDTDATEGELS 180
Query: 61 SP-------------TVGHPNFKWVQPES--EWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
P +G +K ++ ++ E D +AL YTSGTT+ PKGV + HRG ++
Sbjct: 181 GPFDEAVLEGLKFDVEMGGKGWKDLEAQAGNEEDIIALAYTSGTTARPKGVEYTHRGAYL 240
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
+ ++I+ + + +LWTLPMFH GW + W + AV GT+ CLRK+D P I+ ++
Sbjct: 241 AAMGNIIESGLNYHTGRAKYLWTLPMFHAMGWMFPWSVTAVRGTHYCLRKIDYPEIWRLL 300
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSY 221
K G+TH A V +L ++ + L + V++ T ASPP+A L + +L H+Y
Sbjct: 301 KDEGITHFNAAPTVNTLLCAAKEAEKLPQEVRV-TVAASPPSAWLFEQMTNLNLHPVHTY 359
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKH 277
GLTET G + +W T+ + E+ ARQG I + V+ E + V
Sbjct: 360 GLTETYGPITKGYHMPEWETIPEKEKYAKMARQGHGFIMALPVRVIKTEQADGVLIDVTR 419
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
DGQ GEIVF GY KD E ++ + ++GD+ V H DG ++I DR+KD+I
Sbjct: 420 DGQEIGEIVFEGNICAKGYYKDAE-ATRKLWAGGVLHSGDLAVWHPDGAIQILDRAKDII 478
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +E++L +P+I EV + A D WG+RP AFV+ K + + +I+
Sbjct: 479 ISGGENISSVALEAMLSTHPSILEVGVCAVADSHWGERPKAFVTTKDGSNSETLGAEVIQ 538
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + + +M + V + ELPKT+TGKI+K VLRE
Sbjct: 539 WAKDNSNISRFMVPREVEVVAELPKTSTGKIKKNVLRE 576
>gi|336469667|gb|EGO57829.1| hypothetical protein NEUTE1DRAFT_42686 [Neurospora tetrasperma FGSC
2508]
gi|350290676|gb|EGZ71890.1| acetyl-CoA synthetase-like protein [Neurospora tetrasperma FGSC
2509]
Length = 581
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 213/367 (58%), Gaps = 12/367 (3%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI---PNQPVFLWTLPMFHEN 132
+E D +A+ +TSGTTS PKG V+ HRG ++ T++++I+ + + +LWTLPMFH
Sbjct: 207 NEDDMIAIPFTSGTTSKPKGCVYTHRGAYLATLANVIESGLNVADGRSKYLWTLPMFHAM 266
Query: 133 GWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRP 192
GW++ W + AV GT++CLRK+D P+I+ ++K GVTH C A V +L ++ + L +P
Sbjct: 267 GWTFPWAVCAVRGTHVCLRKIDYPLIWKLLKEEGVTHFCAAPTVNTLLCAAKEAEALPKP 326
Query: 193 VKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLK 251
V++ T ASPP L + SL H YGLTET G + W+ L ++
Sbjct: 327 VRV-TVAASPPTPHLFEQMTSLNLFPVHVYGLTETYGPITRGYILPSWDNLPPHDKYAKM 385
Query: 252 ARQGVRTIGLADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCM 307
ARQG I ++ P+ + V+ +GQ GEI+F GY KD E +
Sbjct: 386 ARQGHGFITSLPARIIKPDQPEGVLIDVEKNGQEVGEIIFTGNICCKGYYKDPEATRKLF 445
Query: 308 RDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQ 367
+TGD+ V H DG + I+DR+KD+IISGGENISS +ES+L +P I E +VA
Sbjct: 446 A-GGMLHTGDLAVWHPDGSIHIQDRAKDIIISGGENISSVALESMLAEHPDILEAGVVAV 504
Query: 368 RDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATGK 425
D WG+RP A+++LK T + +I++ + + + +M + V I ELPKT+TGK
Sbjct: 505 PDSHWGERPKAYITLKEGRETSLTGQDVIDWAKHNSSISKFMVPREVEIVKELPKTSTGK 564
Query: 426 IQKFVLR 432
I+K LR
Sbjct: 565 IKKNELR 571
>gi|392597255|gb|EIW86577.1| acetyl-CoA synthetase-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 568
Score = 251 bits (640), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 156/454 (34%), Positives = 232/454 (51%), Gaps = 34/454 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL V+ +L HS +KL+ VD + + L TI P ++ +D P
Sbjct: 123 RLTPPEVAYILEHSGAKLILVDQECT-------HLIRGTTI---PTIVSNDTGRDDDPYE 172
Query: 65 GH--------PNFKWVQPESEWDPMA---LNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
W+ + E D A LNYTSGTT PKGV+ RG ++ V ++++
Sbjct: 173 AFLASGRRFSRERGWMGLDVERDEDAGAVLNYTSGTTGKPKGVLTTLRGSYLAAVGNVVE 232
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
++ + +LW LPMFH GW+Y W + +R VD I+ H VTH C A
Sbjct: 233 GQMNKESTYLWILPMFHAAGWTYPWANVFACAKQVTIRSVDYNAIWRHFLHSRVTHYCAA 292
Query: 174 LVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
V + + P +PL +PV + +GA+P A ++ + E G H YGLT+T G C
Sbjct: 293 PTVQIGIVNHPDARPLPQPVTAIIAGAAPTAQLIGQLEQQGIKPVHVYGLTQTYGPFTRC 352
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP------ETGMSVKHDGQSQGEIVF 287
+ W++L+ +RA+L ARQG ++ VV+P + + V DG + GEIV
Sbjct: 353 YDQDSWSSLSLEDRAKLMARQGQSFATAQEVRVVYPPRHDNDQELIDVPRDGNTVGEIVT 412
Query: 288 RSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSA 347
R +M Y +D + + R +F +GD+ V++ DG + I DRSKD+IISGGEN SS
Sbjct: 413 RGNIVMKEYFRDPDATKKAFR-GGYFNSGDLAVMYPDGVVAIMDRSKDLIISGGENASSL 471
Query: 348 EVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL------KWELSKKPTEEAIIEFCRA 401
+E L +P + EV++VA+ + WG+RP AF L KWE + + + R
Sbjct: 472 AIEQELAAHPDVLEVSVVARAHEKWGERPMAFAILHPERSSKWEGNHDAFVADLKKHART 531
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLREIV 435
RLP + + V + ELPKT+TGKI K LR+ V
Sbjct: 532 RLPGFATPEWVEVVQELPKTSTGKILKTALRKRV 565
>gi|295670796|ref|XP_002795945.1| 2-succinylbenzoate-CoA ligase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284078|gb|EEH39644.1| 2-succinylbenzoate-CoA ligase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 582
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 159/457 (34%), Positives = 247/457 (54%), Gaps = 38/457 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + ++ + +HSE++++ VD + PL + +P P++I D A
Sbjct: 124 RLKPEDIAYIFNHSEAEVIIVDQEFLPLLVEFRKTYPH-----IPLIIDTDTDAIEGELS 178
Query: 65 GH--------PNFKWVQPESEWDPM-----------ALNYTSGTTSSPKGVVHCHRGLFI 105
G NF W+ + AL+YTSGTTS PKGV + HR ++
Sbjct: 179 GQFDQAVLEGLNFDTASGSHGWEGLKAQTADEDALIALSYTSGTTSRPKGVEYIHRSCYL 238
Query: 106 ITVSSLIDWRIP---NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
T++++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P+I+ ++
Sbjct: 239 ATLANIIESGLNYNRGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPLIWKLL 298
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSY 221
K G+TH C A V +L SS + L PV++ T ASPP L + +L H Y
Sbjct: 299 KEEGITHYCAAPTVNTILCSSKEAEKLPSPVRV-TVAASPPTPHLFEQMTNLNLHPVHVY 357
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVKH 277
GLTET G + + +W+T+ ++ ARQG + + V+ E T + V+
Sbjct: 358 GLTETYGPITKGYYLPEWDTIPAQDKYEKMARQGHGFLTSLPVRVIKTEVPEGTIIDVEK 417
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
+G+ GEIVF GY K+ E + ++GD+ V H DG ++I DR+KD+I
Sbjct: 418 NGKEIGEIVFVGNICAKGYYKNVEETKKLF-SGGVLHSGDLAVWHPDGSIKILDRAKDII 476
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +ES+L +P I E +VA D WG+RP AF+++K K+ + +IE
Sbjct: 477 ISGGENISSIALESMLVTHPDILEAGVVAVPDSHWGERPKAFITVK--SGKQLGGKDVIE 534
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
+ + + + +M + V + ELPKT+TGK++K VLR
Sbjct: 535 WAKHVSGISRFMVPREVEVVPELPKTSTGKVKKNVLR 571
>gi|302916055|ref|XP_003051838.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732777|gb|EEU46125.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 572
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 146/369 (39%), Positives = 217/369 (58%), Gaps = 12/369 (3%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP-NQPVFLWTLPMFHE 131
Q SE D +A+ +TSGTTS PKGVV+ HRG ++ T++++I+ + + +LWTLPMFH
Sbjct: 195 QARSEDDMLAIPFTSGTTSRPKGVVYTHRGAYLATLANIIESGLNIGRCKYLWTLPMFHA 254
Query: 132 NGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDR 191
GW++ W AV GTN+CLRKVD P+++ ++K G+TH A V +L ++ + L R
Sbjct: 255 IGWTFPWSTVAVRGTNVCLRKVDYPLLWKLLKEEGITHFNAAPTVNTLLVAAKEAERLPR 314
Query: 192 PVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARL 250
VK+ T ASPP+ L + +L + H YG+TET G + C +W+ L E+
Sbjct: 315 EVKV-TVAASPPSGHLFEQMTNLNLIPVHVYGMTETYGPITKCYTLPEWDDLPPHEKYAK 373
Query: 251 KARQGVRTIGLADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLC 306
ARQG I + ++ P+ + V DG+ GEIVF Y KD E +
Sbjct: 374 MARQGHGFITSLPIRIIKPDQPQGVLIDVAKDGKEIGEIVFLGNICAKEYYKDPEATRQL 433
Query: 307 MRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVA 366
++GD+ V H DG +I DR+KD+IISGGENISS +ES+L +P + E +V+
Sbjct: 434 FA-GGVLHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESMLVEHPDVLEAGVVS 492
Query: 367 QRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATG 424
D WG+RP A+V++K K T + II + + + + +M + V + +ELPKT+TG
Sbjct: 493 VPDSHWGERPKAYVTVKE--GKAVTGDEIISWAKHQSDISRFMVPREVEVVNELPKTSTG 550
Query: 425 KIQKFVLRE 433
KI+K VLRE
Sbjct: 551 KIKKNVLRE 559
>gi|340905328|gb|EGS17696.1| hypothetical protein CTHT_0070380 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 582
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 219/367 (59%), Gaps = 10/367 (2%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID--WRIPNQPV-FLWTLPMFHEN 132
+E D +A+ +TSGTTS PKGV++ HRG ++ ++++++ +P++ +LWTLPMFH
Sbjct: 204 NEDDLLAIPFTSGTTSKPKGVMYTHRGAYLAALANIVESGLNLPDRRCRYLWTLPMFHAV 263
Query: 133 GWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRP 192
GW++ W + AV GT++CLRK+D P+I+ ++K G+TH A V +L + +PL P
Sbjct: 264 GWTFPWSVCAVRGTHVCLRKIDYPLIWRLLKQEGITHFNAAPTVNTLLCNHKDAEPLPHP 323
Query: 193 VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKA 252
V++ + + P A+ + L + H YG+TET G + +W L ER A
Sbjct: 324 VRVTVAASPPTPALFEQMTKLNLLPVHVYGMTETYGPITRGYILPEWERLPGHERFANMA 383
Query: 253 RQG---VRTIGLADMDVVHPE-TGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMR 308
RQG + ++ + + PE + V+ +G+ GEIVF+ GY KD E +
Sbjct: 384 RQGWGFLTSLPVRVIKTDQPEGVVVDVERNGKEIGEIVFQGNICCKGYYKDPEATRKLF- 442
Query: 309 DNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQR 368
+ ++GD+ V H DG ++I+DR+KD+IISGGENISS +ES+L +P I E +VA
Sbjct: 443 EGGVLHSGDLAVWHPDGSIQIQDRAKDIIISGGENISSVALESMLAEHPDILEAGVVAVP 502
Query: 369 DKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATGKI 426
D WG+RP A+V++K +K + II++ + + + +M + V ELPKT+TGKI
Sbjct: 503 DSHWGERPKAYVTIKEGHAKNLRPKDIIDWAKNQSNISKFMVPREVEFVRELPKTSTGKI 562
Query: 427 QKFVLRE 433
+K VLRE
Sbjct: 563 KKNVLRE 569
>gi|115389402|ref|XP_001212206.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114194602|gb|EAU36302.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 580
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 169/458 (36%), Positives = 247/458 (53%), Gaps = 38/458 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT----S 60
RL +S + HS+ +++ VD + PL A + P+ P++I D AT S
Sbjct: 124 RLKEDDISYIFQHSDVEVIIVDKEFEPLIQAYRASKPN-----IPIIIDTDTDATEGELS 178
Query: 61 SP-------------TVGHPNFKWV--QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
P G ++ + Q SE D +AL YTSGTT+ PKGV + HRG ++
Sbjct: 179 GPFDGAVLEGLRHDLETGAKGWEGLESQAASEDDILALAYTSGTTARPKGVEYTHRGCYL 238
Query: 106 ITVSSLIDWRIP---NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
+ ++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+ ++
Sbjct: 239 AAMGNVIESGLNPLRGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPEIWRLL 298
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSY 221
K VTH A V +L ++ + L PV++ T ASPP L + +L H+Y
Sbjct: 299 KQEHVTHFNAAPTVNTLLCNADEAERLPNPVQV-TVAASPPTPHLFEQMTNLNLHPVHTY 357
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVH---PE-TGMSVKH 277
G+TET G + W+ L E+ + ARQG + + VV PE T + V
Sbjct: 358 GMTETYGPITKGYIMPSWDQLPLKEKYQKMARQGHGFVTSLPVRVVKTDVPEGTVVDVSR 417
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
DGQ GEIVF GY KD E + ++GD+ V HSDG ++I DR+KD+I
Sbjct: 418 DGQEIGEIVFVGNICARGYYKDPEATRKLFA-GGVLHSGDLAVWHSDGAIQILDRAKDII 476
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +ES+L +P I E +VA D WG+RP A+V++K K +A+IE
Sbjct: 477 ISGGENISSVALESMLVTHPDILEAGVVAVPDSHWGERPKAYVTVKG--GKTLEGKAVIE 534
Query: 398 FCRAR--LPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ R+ + +M + V + ELPKT+TGK++K VLRE
Sbjct: 535 WARSTSGISKFMVPREVEVVPELPKTSTGKVRKNVLRE 572
>gi|46125799|ref|XP_387453.1| hypothetical protein FG07277.1 [Gibberella zeae PH-1]
Length = 588
Score = 250 bits (639), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 145/369 (39%), Positives = 216/369 (58%), Gaps = 12/369 (3%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP-NQPVFLWTLPMFHE 131
Q SE D +A+ +TSGTTS PKGVV+ HRG ++ ++++++ + + +LWTLPMFH
Sbjct: 217 QARSEDDMLAIPFTSGTTSKPKGVVYTHRGSYLAAMANIVESGLNIGRCKYLWTLPMFHA 276
Query: 132 NGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDR 191
GW++ W + AV GTN+CLRK+D P+I+ ++K G+TH A V +L ++ + L
Sbjct: 277 VGWTFPWAVVAVRGTNVCLRKIDYPLIWKLLKEEGITHFNAAPTVNTLLVAAKEAEKLPH 336
Query: 192 PVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARL 250
VK+ T ASPP L + L + H YG+TET G C +W++L TE+
Sbjct: 337 EVKV-TVAASPPTGYLFEQMTKLNLIPVHVYGMTETYGPSTKCYTLPEWDSLPPTEKYAK 395
Query: 251 KARQGVRTIGLADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLC 306
+RQG I + ++ P+ + V DG+ GEIVF Y KD ++
Sbjct: 396 MSRQGHGFITSLPIRIIKPDQPQGVLIDVAKDGKEIGEIVFMGNICAKEYYKDP-AATRE 454
Query: 307 MRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVA 366
+ ++GD+ V H DG +I+DR+KD+IISGGENISS +ES+L +P I E VA
Sbjct: 455 LFAGGVLHSGDLAVWHPDGSAQIQDRAKDIIISGGENISSVALESMLAQHPDILEAGAVA 514
Query: 367 QRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATG 424
D WG+RP +V++K K T + II++ + + + +M + V I DELPKT+TG
Sbjct: 515 VPDSHWGERPKVYVTVK--DGKSVTGDEIIQWAKHQSDISRFMVPREVEIVDELPKTSTG 572
Query: 425 KIQKFVLRE 433
KI+K VLRE
Sbjct: 573 KIKKNVLRE 581
>gi|67527910|ref|XP_661805.1| hypothetical protein AN4201.2 [Aspergillus nidulans FGSC A4]
gi|40740110|gb|EAA59300.1| hypothetical protein AN4201.2 [Aspergillus nidulans FGSC A4]
Length = 524
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/460 (35%), Positives = 242/460 (52%), Gaps = 38/460 (8%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
+V RL ++ + HS+++++ D + PL A + P V++ D AT
Sbjct: 69 SVNYRLKEDDIAYIFTHSDAEIIIADKEYLPLLSAYRAAKPHVR-----VILDTDTDATE 123
Query: 61 SPTVG--------HPNFK-------WV----QPESEWDPMALNYTSGTTSSPKGVVHCHR 101
G N+ W Q SE D +AL YTSGTT+ PKGV + HR
Sbjct: 124 GQLAGPFDEAILEGLNYDRDTGRKGWSALESQAASEDDVIALAYTSGTTARPKGVEYTHR 183
Query: 102 GLFIITVSSLIDWRIPNQP---VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPII 158
G ++ + ++I+ + Q +LWTLPMFH GW++ W + AV GT+ CLRK+D P I
Sbjct: 184 GCYLAAMGNIIESGLNFQGRRCKYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPQI 243
Query: 159 YSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVV 217
+ ++K GVTH A V +L SSP +PL PV + T ASPP L + L
Sbjct: 244 WKLLKQEGVTHFNAAPTVNTLLCSSPEAEPLPEPVHV-TVAASPPTPHLFEQMTGLNLHP 302
Query: 218 SHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGM 273
H YG+TET G + + + W L E+ ARQG + + V+ E T +
Sbjct: 303 VHVYGMTETYGPITKGYYMTAWENLPRKEKFARMARQGHGFLTSLPVRVIQTEVPEGTII 362
Query: 274 SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRS 333
VK DG+ GEIVF GY KD E + ++GD+ V H DG ++I DR+
Sbjct: 363 DVKQDGKEIGEIVFVGNICARGYYKDPEATRKLFA-GGVLHSGDLAVWHPDGAIQILDRA 421
Query: 334 KDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEE 393
KD+IISGGENISS +ES+L +P I E +VA D WG+RP AFV++K ++ +
Sbjct: 422 KDIIISGGENISSVALESMLVTHPDILEAGVVAVPDSHWGERPKAFVTVK--PGRQLKGK 479
Query: 394 AIIEFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVL 431
++++ R + + +M + V + ELPKT+TGK++K VL
Sbjct: 480 DVVDWARNTSGISKFMVPREVEVVAELPKTSTGKLRKNVL 519
>gi|71010373|ref|XP_758382.1| hypothetical protein UM02235.1 [Ustilago maydis 521]
gi|46098124|gb|EAK83357.1| hypothetical protein UM02235.1 [Ustilago maydis 521]
Length = 602
Score = 249 bits (636), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/382 (37%), Positives = 211/382 (55%), Gaps = 24/382 (6%)
Query: 74 PESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENG 133
P E P+AL YTSGTT PKGV+ HRG ++ V++ + I + V+LW LPMFH G
Sbjct: 215 PHDEEQPIALCYTSGTTGRPKGVLTNHRGAYLAAVANAFEANITQESVYLWVLPMFHACG 274
Query: 134 WSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPV 193
W+Y W + A T+ +RKVD +I+ + +H ++H CGA V L + P+ + L+R V
Sbjct: 275 WTYPWAVTASLATHHTIRKVDNAVIWHALVNHNISHYCGAPTVQIGLVNHPAARKLERRV 334
Query: 194 KILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKAR 253
+ + ++P A +L + ESL H YGLTET G ++ +W L RAR+ AR
Sbjct: 335 NVAVAASAPTANLLAKMESLNLHPVHVYGLTETYGPFTRRYFEPEWAKLDVDSRARMMAR 394
Query: 254 QGVRTIGLADMDVVHPETG--------MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSL 305
QG + ++ VV E+ + V+ +GQ GEIV R +M+GY D ++
Sbjct: 395 QGHSYLTSDEVRVVRTESSTDSSSDDLIDVQRNGQETGEIVIRGNMVMIGYYNDTAATNK 454
Query: 306 CMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALV 365
+ WF+TGD+ V H G ++I DR KD+IISGGENISS VE L + + E ++
Sbjct: 455 AI-IKGWFHTGDLAVRHPGGEIQILDRGKDIIISGGENISSLMVEQELAAHTDVLECCVI 513
Query: 366 AQRDKFWGKRPCAFVSLKW---------ELSKKPTEE------AIIEFCRARLPHYMAHK 410
A+ + WG+R AFV L E+ K + E ++ + C+ R+ + +
Sbjct: 514 ARPHEKWGERGQAFVVLTEQAKAKRNIDEIKKHGSHENRAFIQSLKKHCKDRMSGFAVPE 573
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
I DELPKT+TGK+QK VLR
Sbjct: 574 WFDIVDELPKTSTGKVQKNVLR 595
>gi|448395799|ref|ZP_21568893.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445660380|gb|ELZ13176.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 532
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/379 (39%), Positives = 212/379 (55%), Gaps = 19/379 (5%)
Query: 65 GHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFL 123
G P + +PE SE D ++NYTSGTT +PKGVV HR + I + +L
Sbjct: 150 GQPTEEPDRPEISEDDDASINYTSGTTGNPKGVVRTHRTEHWHALVLNQHMEIRDDDTYL 209
Query: 124 WTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSS 183
WTLPMFH NGW +++ + GGT++C R D ++ ++ H V+ +CGA VLN L
Sbjct: 210 WTLPMFHCNGWGHTYAITGTGGTHVCQRTFDAEGVFERVREHDVSFMCGAPTVLNNLIQY 269
Query: 184 PSTKPL-----DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKS 237
P DR V+I T+G++P A + E G+ + H YGLTETA + +
Sbjct: 270 HEEHPDLETTGDRDVRIATAGSAPATATIETVEDEFGWRIIHIYGLTETAPIITTSNSPR 329
Query: 238 QWNTLADTERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
+ ER R LK +QG +T+ D+ VV E G V DG++ GEIV R +M Y
Sbjct: 330 RL-----AERGRELKVKQGSQTL-CTDVRVVD-EDGEEVPRDGETIGEIVVRGNQVMDRY 382
Query: 297 LK--DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
L+ D + R +F+TGD+ + DG + I+DR KD+IISGGENISS EVE VLY
Sbjct: 383 LEKPDATEQAFSERLEGYFHTGDLATIDEDGMVAIQDRKKDIIISGGENISSIEVEDVLY 442
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+P + + A++ + WG+ P A V + + +PTE+ I+EF L Y SV
Sbjct: 443 DHPDVGKAAVIPVPSEEWGETPKALVVPRSD--AEPTEDEILEFVGEHLAGYKKPSSVDF 500
Query: 415 EDELPKTATGKIQKFVLRE 433
++LP+TATGK+QK+ LRE
Sbjct: 501 VEDLPETATGKVQKYELRE 519
>gi|310793169|gb|EFQ28630.1| AMP-binding enzyme [Glomerella graminicola M1.001]
Length = 574
Score = 248 bits (634), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 148/369 (40%), Positives = 215/369 (58%), Gaps = 10/369 (2%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP---NQPVFLWTLPMF 129
Q +E D +A+ +TSGTTS PKGVV+ HRG ++ T+ ++I+ + + FLWTLPMF
Sbjct: 201 QCGNEDDMLAIPFTSGTTSRPKGVVYTHRGAYLATMGNVIESGLNYHNGRCKFLWTLPMF 260
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPL 189
H GW++ W + AV GT+ICLRK+D P+I+ ++K GVTH A V +L SS + L
Sbjct: 261 HAVGWTFPWAVTAVRGTHICLRKIDYPLIWKLLKEEGVTHFNAAPTVNTLLCSSKEAEKL 320
Query: 190 DRPVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERA 248
R V++ T ASPP+A L + +L H YG+TET G + W TL +E+
Sbjct: 321 PREVRV-TVAASPPSAHLFEQMMNLNLFPVHVYGMTETYGPITKGYPMPSWETLPSSEKY 379
Query: 249 RLKARQG---VRTIGLADMDVVHPETGM-SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
ARQG V ++ + + PE + V DG+ GEIVF Y KD E +
Sbjct: 380 AKMARQGHGFVTSLPIRIVKTDQPEGVLVDVAKDGKETGEIVFFGNICAKEYYKDPEATR 439
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
D ++GD+ V H DG +I DR+KD+IISGGENISS +E +L +P + E A+
Sbjct: 440 KLF-DGGALHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALEGMLVQHPDLLEAAV 498
Query: 365 VAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATG 424
+A D WG+RP A+V++K + K + I ++ + +M + V + ELPKT+TG
Sbjct: 499 IAVPDSHWGERPKAYVTVKEGKTIKGEDLIIWAKHQSNISKFMVPREVEVVGELPKTSTG 558
Query: 425 KIQKFVLRE 433
K++K VLRE
Sbjct: 559 KLKKNVLRE 567
>gi|358366767|dbj|GAA83387.1| AMP-binding domain protein [Aspergillus kawachii IFO 4308]
Length = 579
Score = 248 bits (634), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 162/457 (35%), Positives = 236/457 (51%), Gaps = 36/457 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT----S 60
RL ++ + HSE++++ VD + PL P P+++ D A S
Sbjct: 124 RLKEDDIAYIFTHSEAEVIIVDKEFLPLLRVYREAKPET-----PIIVDTDTDAAEGQLS 178
Query: 61 SP-----------TVGHPNFKW----VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
P + N W Q SE D +AL YTSGTTS PKGV + +RG ++
Sbjct: 179 GPFDEAVLEGLKYDIATGNKGWEGLQAQAGSEDDVVALAYTSGTTSRPKGVEYTNRGAYL 238
Query: 106 ITVSSLIDWRIP---NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
+ ++++ + + +LW LPMFH GW++ W + A GT+ CLRKVD I+ +
Sbjct: 239 AALGNVVESGLNVFNGRCRYLWILPMFHAVGWTFPWAVTAARGTHYCLRKVDYGQIWKLF 298
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
K G+TH A V +L + P +PL PV + +G+ P + + SL H YG
Sbjct: 299 KKEGITHFNAAPTVNTLLCNHPDAEPLSTPVIVQVAGSPPTPHLFEQMTSLNLRPVHVYG 358
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVH---PE-TGMSVKHD 278
+TET G C W+ L E+ R ARQG + V+ PE T + VK D
Sbjct: 359 MTETYGPTTRCYMLPAWDQLPRDEKFRRMARQGHGFLTSLPTRVIKTDVPEGTIIDVKQD 418
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
G+ GEI F GY KD E + ++GD+ V H DG ++I DR+KD+II
Sbjct: 419 GKEIGEIAFVGNICAKGYYKDAEATRKLFA-GGVLHSGDLAVWHPDGAIQILDRAKDIII 477
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ES+L +P I EV +VA D WG+RP AFV+ K + E +I++
Sbjct: 478 SGGENISSVALESMLVTHPDILEVGVVAVPDTHWGERPKAFVTTKQGRHLEGKE--VIDW 535
Query: 399 CR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
R +++ +M + V + ELPKT+TGKI+K VLR+
Sbjct: 536 ARNQSQISKFMLPREVEVVAELPKTSTGKIRKNVLRD 572
>gi|70990998|ref|XP_750348.1| AMP-binding domain protein [Aspergillus fumigatus Af293]
gi|66847980|gb|EAL88310.1| AMP-binding domain protein, putative [Aspergillus fumigatus Af293]
gi|159130822|gb|EDP55935.1| AMP-binding domain protein, putative [Aspergillus fumigatus A1163]
Length = 575
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 163/459 (35%), Positives = 246/459 (53%), Gaps = 40/459 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL ++ + HS++ ++ VD + PL A + P PV++ D +T
Sbjct: 119 RLKEDDIAYIFTHSDADVIIVDKEYLPLLQAYRAAKPE-----IPVIVDTDTDSTEGQLS 173
Query: 65 GHPNFKWV--------------------QPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
G P + V Q SE D +AL YTSGTT+ PKGV HRG +
Sbjct: 174 G-PFDEAVLLGLKYDADTGAKGWDGLESQAASEDDVIALAYTSGTTARPKGVEFTHRGCY 232
Query: 105 IITVSSLIDWRIPNQP---VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSV 161
+ ++++I+ + +Q +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+ +
Sbjct: 233 LAALANVIESGLNSQQGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPEIWRL 292
Query: 162 IKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHS 220
+K +TH A V +L ++ + L RPV++ T ASPP L + +L H
Sbjct: 293 LKQEHITHFNAAPTVNTLLCAANEAERLPRPVQV-TVAASPPTPHLFEQMTNLNLHPVHV 351
Query: 221 YGLTETAGFVVSCAWKSQWNTLADTERARLKARQG---VRTIGLADMDVVHPE-TGMSVK 276
YG+TET G + + QW+ L E+ + ARQG V ++ + + PE T + V+
Sbjct: 352 YGMTETYGPITKGYYMPQWDQLPAEEKYKKMARQGHGFVTSLPVRVIKTDVPEGTIIDVQ 411
Query: 277 HDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDV 336
DG+ GEI F GY KD E + ++GD+ V H DG ++I DR+KD+
Sbjct: 412 RDGKEIGEIAFVGNICSRGYYKDPEATRKLFA-GGVLHSGDLAVWHPDGAVQILDRAKDI 470
Query: 337 IISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAII 396
IISGGENISS +ES+L +P I E +VA D WG+RP AFV++K K+ + +I
Sbjct: 471 IISGGENISSVALESMLVTHPDILEAGVVAVPDAHWGERPKAFVTVKQ--GKQIDGQEVI 528
Query: 397 EFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + + +M + V + ELPKT+TGK++K VLRE
Sbjct: 529 AWAKNNSAISKFMVPREVEVVAELPKTSTGKVRKNVLRE 567
>gi|414866442|tpg|DAA44999.1| TPA: putative AMP-dependent synthetase and ligase superfamily
protein [Zea mays]
Length = 252
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/242 (51%), Positives = 169/242 (69%), Gaps = 9/242 (3%)
Query: 196 LTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQG 255
+T+GA+PP +VL LGF ++H+YGL+ET G CAWK +W+ L ERARL ARQG
Sbjct: 1 MTAGAAPPPSVLAAMSKLGFRITHTYGLSETYGPSTVCAWKPEWDRLPADERARLHARQG 60
Query: 256 VRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYT 315
VR +GL +DVV P+T V DG + GEIV R +M GYLK+ E ++ +N WF++
Sbjct: 61 VRYVGLEGLDVVDPKTMTPVPADGTTMGEIVMRGNGVMKGYLKNPEANAEAF-ENGWFHS 119
Query: 316 GDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKR 375
GD+GV H DGY+E++DR+KD+IISGGENISS EVE +Y++PA+ E ++VA+ D+ WG+
Sbjct: 120 GDLGVRHGDGYVEVRDRAKDIIISGGENISSLEVEKAVYLHPAVLEASVVARADERWGES 179
Query: 376 PCAFVSLKWELSKKPTEEA-----IIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFV 430
PCAFV+LK + + ++EA I+ FCR +LP Y KSV+ LPKTATGKI+K
Sbjct: 180 PCAFVTLKDAVDR--SDEAALARDIMRFCREKLPGYWVPKSVVF-GPLPKTATGKIKKHE 236
Query: 431 LR 432
LR
Sbjct: 237 LR 238
>gi|6573716|gb|AAF17636.1|AC009978_12 T23E18.22 [Arabidopsis thaliana]
Length = 516
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 156/447 (34%), Positives = 244/447 (54%), Gaps = 59/447 (13%)
Query: 6 LDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT-- 63
D + +++ L ++ K+ FVD + +A +LSL + I KP++I + T +PT
Sbjct: 98 FDSQMLAMALEKTKPKVFFVDSEFLSVAEESLSLL--SNIEEKPLII----TITENPTEQ 151
Query: 64 -----------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLI 112
G+PNFK ++P E DP+ALN+TSGTTS+PK VV+ HRG ++ + +
Sbjct: 152 SKYEQYEDFLSTGNPNFKPIRPVDECDPIALNFTSGTTSTPKCVVYSHRGAYLNATAVGV 211
Query: 113 DWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICG 172
+ PV+L T+PM+H +GW Y W + A GG +CLR+V+ +I+ I H VT+ G
Sbjct: 212 MNEMKPMPVYLCTVPMYHCSGWCYIWTVTAFGGVIVCLREVNDEVIFDSIVKHKVTNFGG 271
Query: 173 ALVVLNMLSSSPSTKPLDRP--VKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
+ VLNM++++ + P V++++ G+SPP V+L+ + LGF V +YG +E G
Sbjct: 272 SPPVLNMIANARDSVKKSFPWTVQVMSGGSSPP-EVMLKLKKLGFKVMMAYGCSEVYGLG 330
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+C W +W TL + E RLKAR G+ +DV+ P T SV HDG++ I R
Sbjct: 331 TACLWMPEWETLPEEESLRLKARDGLNHFAKEAVDVLDPTTMKSVPHDGKTIRVIALRGN 390
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GY KD+E + R W+++ D+GV+ DG+
Sbjct: 391 TVMSGYFKDKEATEAAFR-GGWYWSRDMGVIDPDGH------------------------ 425
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPH---YM 407
PA+ + +V + D+ G+ CAFV LK + EE IIEFC+ +L + M
Sbjct: 426 ------PAVYDAGVVGRPDETLGESMCAFVKLKE--GAEAREEEIIEFCKRKLGNKNMKM 477
Query: 408 AHKSVIIEDELPKTATGKIQKFVLREI 434
K+V+ D +PKT TGKI+K VLR++
Sbjct: 478 IPKTVVFSD-VPKTPTGKIRKNVLRKM 503
>gi|319650037|ref|ZP_08004186.1| AMP-dependent synthetase and ligase [Bacillus sp. 2_A_57_CT2]
gi|317398218|gb|EFV78907.1| AMP-dependent synthetase and ligase [Bacillus sp. 2_A_57_CT2]
Length = 530
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 160/439 (36%), Positives = 238/439 (54%), Gaps = 22/439 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIH--------DDV 56
RL + +L+HSESK+LFVD L L + K + +H D
Sbjct: 88 RLKPEDYLYILNHSESKILFVDQDLYHLILPVKDQLKT----VKKIFVHYKEEETEESDY 143
Query: 57 SATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
+ S P + V E+ D +L YTSGTT +PKGV+ HR ++ +S++ R+
Sbjct: 144 DSWLSSQDSSPYQREVLDEN--DVCSLLYTSGTTGNPKGVMLTHRNNYLHALSTMHHLRV 201
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+Q V L LPMFH NGW + A G + +C+RK I+ ++ H V+ + A V
Sbjct: 202 SDQDVLLHVLPMFHVNGWGSPFYYTANGASQVCIRKATPERIFDEVQKHKVSVMHMAPTV 261
Query: 177 LN--MLSSSPSTKPLDRPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSC 233
LN M +++ V+++ +G++PP A + R E LG+ YG+TE++
Sbjct: 262 LNSLMQHYEQFVPAVEQDVRVVIAGSAPPPAFVTRVEKELGWEFIQVYGMTESSPLSTVS 321
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
+S L ++ R+KA+ G + IG ++ V++ E G V H+G GE+V RS +M
Sbjct: 322 TIRSHLKELPLAQQYRMKAKAGHQMIG-CEVRVIN-EQGEEVAHNGLEIGEVVVRSNGVM 379
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY K++E + +R W +TGD+ V G ++I DR KD+IISGGENISS E+E L
Sbjct: 380 KGYWKNEEATMEAIRGG-WLHTGDMANVDEYGNIDIVDRKKDIIISGGENISSIEIEGAL 438
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +PAI E A++A + WG+ P AF+ L+ K TE+ II F R +L H+ A V
Sbjct: 439 YEHPAILEAAVIAVPHEKWGETPHAFIVLRN--GKTLTEQEIISFTREKLAHFKAVTGVT 496
Query: 414 IEDELPKTATGKIQKFVLR 432
+ELPKTA+GKIQK LR
Sbjct: 497 FVEELPKTASGKIQKIHLR 515
>gi|55377030|ref|YP_134880.1| medium-chain acyl-CoA ligase [Haloarcula marismortui ATCC 43049]
gi|55229755|gb|AAV45174.1| medium-chain acyl-CoA ligase [Haloarcula marismortui ATCC 43049]
Length = 533
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 227/441 (51%), Gaps = 21/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP-KPVLIHDDVSATSSPT 63
RLD ++ +L+ E+ + DY + P+ T + +P I + A S
Sbjct: 89 RLDPAKIEYILNDCEAATVIADYDFAEKVQPVRDDIPAETFIGYEPDRIDGEWEAYSGIL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
G P + +PE +E D ++NYTSGTT PKGVV HR ++ I + +
Sbjct: 149 DGQPTAEPDRPEMAEDDDASINYTSGTTGDPKGVVRTHRTESWHSLVLNQHMEIRDDDTY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW +++ + GGT++C R D + ++ + V+ +CGA VLN L
Sbjct: 209 LWTLPMFHCNGWGHTYAITGTGGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQ 268
Query: 181 ----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
+ DR V+I T+G++P A + R E G+ + H YGLTETA + +
Sbjct: 269 HYRANDGDVVTQGDRDVRIATAGSAPATATIERVEDEFGWRIIHIYGLTETAPIITTSNS 328
Query: 236 KSQWNTLADTERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+ ER R LK +QG T+ D+ +V E G V DG + GE+V + +M
Sbjct: 329 PRRI-----AERGRELKVKQGSETL-CTDIRIVD-EDGTDVPRDGATIGEVVVQGNQVMD 381
Query: 295 GYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
YL E + D +F+TGD+ DG ++I DR KD+IISGGENISS E+E
Sbjct: 382 RYLNKPEITEEAFNDRAEGYFHTGDLAAWDEDGMIQIMDRRKDIIISGGENISSIELEDE 441
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P + + A++ + WG+ P A V TE+ I+EF R R+ Y +
Sbjct: 442 LYDHPGVLKAAVIPTPSEDWGETPMAIVVPT--ADSDATEQDILEFLRERVASYKVPAGI 499
Query: 413 IIEDELPKTATGKIQKFVLRE 433
D LP+TATGKIQK+ LRE
Sbjct: 500 DFRDSLPETATGKIQKYELRE 520
>gi|390604099|gb|EIN13490.1| acetyl-CoA synthetase-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 550
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 230/453 (50%), Gaps = 31/453 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL VS +L HS ++L+ +D + L P L V++ D P
Sbjct: 99 RLTRPEVSYILQHSGARLILIDREYLHLLDG-----PEGNPLGAQVVVSHDSGRAGDPYE 153
Query: 63 --------TVGHPNFKWVQPESEWDP-MALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
G + ++ E++ D AL YTSGTT PKGV+ RG ++ +++ +
Sbjct: 154 EFLKEGRRASGERGWPGLEVETDEDAGAALCYTSGTTGRPKGVLTTLRGSYLAAIANAFE 213
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
R+ +LW LPMFH +GW+Y W T + +R V P+I+ H GVTH CGA
Sbjct: 214 TRMNIDSTYLWILPMFHASGWTYPWAATFAMATQLTIRTVSYPLIWKHFLHSGVTHYCGA 273
Query: 174 LVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
V + + P+ + L P+ + +G++P A ++ L H YG+TET G
Sbjct: 274 PTVQIGIVNDPAARRLREPISAIVAGSAPTAHLIGELTKLHINPVHVYGMTETYGPFTRN 333
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP--------ETGMSVKHDGQSQGEI 285
++ +W L+ +RA+ ARQG + ++ VV+P + + V DG++ GEI
Sbjct: 334 YFQPEWAALSLEDRAKFMARQGHQFATALEVRVVYPPAEGSSLDDALVDVPKDGKTVGEI 393
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
V R M Y +D E + R F +GD+ V+H DG + I DRSKD+IISGGEN S
Sbjct: 394 VTRGNITMKEYFRDPEATRKAFR-GGCFNSGDLAVMHPDGSIAILDRSKDIIISGGENAS 452
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK------WELSKKPTEEAIIEFC 399
S +E L +P + EVA+VA+ WG+R AFV+LK W E + +
Sbjct: 453 SLAIEQELSTHPHVLEVAVVARPHPKWGERAMAFVTLKPDHVKTWLGKHDQFEVELKKHA 512
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
R+RLP + + V + ELPKT+TGKIQK VLR
Sbjct: 513 RSRLPGFACPEWVRVVSELPKTSTGKIQKMVLR 545
>gi|448678675|ref|ZP_21689682.1| medium-chain acyl-CoA ligase [Haloarcula argentinensis DSM 12282]
gi|445772662|gb|EMA23707.1| medium-chain acyl-CoA ligase [Haloarcula argentinensis DSM 12282]
Length = 533
Score = 248 bits (632), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 156/441 (35%), Positives = 227/441 (51%), Gaps = 21/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP-KPVLIHDDVSATSSPT 63
RLD ++ +L+ E+ + DY + P+ T + KP I + A S
Sbjct: 89 RLDPAKIEYILNDCEAATVIADYDFAEKVQPVRDDIPAETFIGYKPNRIDGEWDAYSDVL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
G P + +P+ +E D ++NYTSGTT PKGVV HR ++ I + +
Sbjct: 149 DGQPTAEPDRPDMTEDDDASINYTSGTTGDPKGVVRTHRTESWHSLVLNQHMEIRDDDTY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW +++ + GGT++C R D + ++ + V+ +CGA VLN L
Sbjct: 209 LWTLPMFHCNGWGHTYAITGTGGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQ 268
Query: 181 ----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
+ DR V+I T+G++P A + R E G+ + H YGLTETA + +
Sbjct: 269 HYRANDGDVVTQGDRDVRIATAGSAPATATIERVEDEFGWRIIHIYGLTETAPIITTSNS 328
Query: 236 KSQWNTLADTERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+ ER R LK +QG + D+ VV E G V HDG + GEIV + +M
Sbjct: 329 PRRI-----AERGRELKVKQGSEAL-CTDIRVVD-EDGDDVPHDGATIGEIVVQGNQVMD 381
Query: 295 GYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
YL E + D +F+TGD+ DG ++I DR KD+IISGGENISS E+E
Sbjct: 382 RYLNKPEITEEAFNDRVEGYFHTGDLATWDDDGMIQIMDRRKDIIISGGENISSIELEDE 441
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P + + A++ + WG+ P A V TE+ I++F R R+ Y +
Sbjct: 442 LYDHPDVLKAAVIPAPSEDWGETPMAIVVPT--AGSDATEQDILDFLRERVASYKVPAGI 499
Query: 413 IIEDELPKTATGKIQKFVLRE 433
D LP+TATGKIQK+ LRE
Sbjct: 500 DFRDSLPETATGKIQKYELRE 520
>gi|238503788|ref|XP_002383126.1| AMP-binding domain protein, putative [Aspergillus flavus NRRL3357]
gi|220690597|gb|EED46946.1| AMP-binding domain protein, putative [Aspergillus flavus NRRL3357]
Length = 569
Score = 247 bits (631), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 158/464 (34%), Positives = 244/464 (52%), Gaps = 38/464 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT----S 60
RL ++ + HS+ + + VD + L + + PS P+++ D AT S
Sbjct: 113 RLKEDDIAYIFTHSDVEAIIVDQEFLSLLQSYRASRPS-----IPIIVDMDTDATEGELS 167
Query: 61 SP----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
P G P + Q SE D +AL YTSGTT+ PKGV + HRG +
Sbjct: 168 GPFDEVVLEGLTYDLDTGAKGWPGLE-AQAASEDDVIALAYTSGTTARPKGVEYTHRGCY 226
Query: 105 IITVSSLIDWRIPN---QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSV 161
+ + ++I+ + + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+ +
Sbjct: 227 LAAMGNVIESGLNSHRGRCRYLWTLPMFHACGWTFPWAVTAVRGTHYCLRKIDYPQIWKL 286
Query: 162 IKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSY 221
+K +TH A V +L +S +PL PV + + + P + + +L H Y
Sbjct: 287 LKQEHITHFNAAPTVNTLLCNSKEAEPLPEPVHVTVAASPPTPHLFEQMTNLNLHPVHVY 346
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVKH 277
G+TET G + + W+ L +ER + ARQG + + V+ + T + V
Sbjct: 347 GMTETYGPITKGYYLPAWDNLPSSERYKKMARQGHGFVTSLPVRVIKTDVAEGTVIDVAR 406
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
DG+ GEIVF GY KD + + ++GD+ V H+DG ++I+DR+KD+I
Sbjct: 407 DGKEIGEIVFVGNICARGYYKDPDATRKLFA-GGVLHSGDLAVWHADGSIQIQDRAKDII 465
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +ES+L +P I E +VA D WG+RP AFV++K K T +IE
Sbjct: 466 ISGGENISSVALESMLVTHPDILEAGVVAVPDSHWGERPKAFVTVK--PGKFLTGSEVIE 523
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
+ R + + +M + V + ELPKT+TGK++K +LR+ N
Sbjct: 524 WARNTSDISKFMIPREVEVVAELPKTSTGKVRKNILRDWAKGAN 567
>gi|169764941|ref|XP_001816942.1| AMP-binding domain protein [Aspergillus oryzae RIB40]
gi|83764796|dbj|BAE54940.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863265|gb|EIT72576.1| acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Aspergillus
oryzae 3.042]
Length = 569
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 163/465 (35%), Positives = 246/465 (52%), Gaps = 40/465 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT----S 60
RL ++ + HS+ + + VD + L + + PS P+++ D AT S
Sbjct: 113 RLKEDDIAYIFTHSDVEAIIVDQEFLSLLQSYRASRPS-----IPIIVDMDTDATEGELS 167
Query: 61 SP----------------TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
P G P + Q SE D +AL YTSGTT+ PKGV + HRG +
Sbjct: 168 GPFDEVVLEGLTYDLDTGAKGWPGLE-AQAASEDDVIALAYTSGTTARPKGVEYTHRGCY 226
Query: 105 IITVSSLIDWRIPN---QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSV 161
+ + ++I+ + + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+ +
Sbjct: 227 LAAMGNVIESGLNSHRGRCRYLWTLPMFHACGWTFPWAVTAVRGTHYCLRKIDYPQIWKL 286
Query: 162 IKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHS 220
+K +TH A V +L +S +PL PV + T ASPP L + +L H
Sbjct: 287 LKQEHITHFNAAPTVNTLLCNSKEAEPLPEPVHV-TVAASPPTPHLFEQMTNLNLHPVHV 345
Query: 221 YGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVK 276
YG+TET G + + W+ L +ER + ARQG + + V+ + T + V
Sbjct: 346 YGMTETYGPITKGYYLPAWDNLPSSERYKKMARQGHGFVTSLPVRVIKTDVAEGTVIDVA 405
Query: 277 HDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDV 336
DG+ GEIVF GY KD + + ++GD+ V H+DG ++I+DR+KD+
Sbjct: 406 RDGKEIGEIVFVGNICARGYYKDPDATRKLFA-GGVLHSGDLAVWHADGSIQIQDRAKDI 464
Query: 337 IISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAII 396
IISGGENISS +ES+L +P I E +VA D WG+RP AFV++K K T +I
Sbjct: 465 IISGGENISSVALESMLVTHPDILEAGVVAVPDSHWGERPKAFVTVK--PGKFLTGSEVI 522
Query: 397 EFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
E+ R + + +M + V + ELPKT+TGK++K +LR+ N
Sbjct: 523 EWARNASDISKFMIPREVEVVAELPKTSTGKVRKNILRDWAKGAN 567
>gi|284164684|ref|YP_003402963.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
gi|284014339|gb|ADB60290.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
Length = 532
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 157/440 (35%), Positives = 229/440 (52%), Gaps = 20/440 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP-KPVLIHDDVSATSSPT 63
RL +L + + DY + A P++T + + I + +
Sbjct: 89 RLVSGEYEYILEDCAANTIVADYDYAEKIEAIRDTIPADTFVGYRADEIEGEWADYEEFL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
G P + +PE SE D ++NYTSGTT PKGVV HR + I + +
Sbjct: 149 EGQPTEEPDRPEISEDDDASINYTSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDTY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSS 182
LWTLPMFH NGW +++ + GGT++C R D ++ ++ + V+ +CGA VLN L
Sbjct: 209 LWTLPMFHCNGWGHTYAITGTGGTHVCQRTFDAAGVFERVREYDVSFMCGAPTVLNNLIQ 268
Query: 183 SPSTKPL-----DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWK 236
P DR V+I T+G++P A + E G+ + H YGLTETA + +
Sbjct: 269 YHEEHPDLETTGDRDVRIATAGSAPATATIETVEDEFGWRIIHIYGLTETAPIITTSNSP 328
Query: 237 SQWNTLADTERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ ER R LK +QG +T+ D+ VV E G V DG++ GEIV R +M
Sbjct: 329 RRL-----AERGRELKVKQGSQTL-CTDVRVVD-EDGADVPRDGETIGEIVVRGNQVMDR 381
Query: 296 YLK--DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
YL+ D + R +F+TGD+ + DG + I+DR KD+IISGGENISS EVE VL
Sbjct: 382 YLEKPDATEEAFTARLEGYFHTGDLATIDEDGMVAIQDRKKDIIISGGENISSIEVEDVL 441
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +P + + A++ + WG+ P A V + +PTE+ I+EF L Y SV
Sbjct: 442 YDHPDVGKAAVIPVPSEKWGETPKALVVPR--SGAEPTEDEILEFVGEHLAGYKKPSSVD 499
Query: 414 IEDELPKTATGKIQKFVLRE 433
++LP+TATGK+QK+ LRE
Sbjct: 500 FVEDLPETATGKVQKYELRE 519
>gi|89098026|ref|ZP_01170912.1| AMP-binding enzyme [Bacillus sp. NRRL B-14911]
gi|89087189|gb|EAR66304.1| AMP-binding enzyme [Bacillus sp. NRRL B-14911]
Length = 526
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 246/440 (55%), Gaps = 22/440 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L+HS +K+LF D L L + + +++H T+ V
Sbjct: 84 RLKPEDYLYILNHSGAKVLFADQDLYHLILPVKEQLQT----VEKIIVHYKNDQTAE--V 137
Query: 65 GHPNFKWVQPES--------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
G+ ++ Q E E D +L YTSGTT +PKGV+ HR ++ +S++ R+
Sbjct: 138 GYDDWLKEQQEGRFPRVQLDENDVCSLLYTSGTTGNPKGVMLTHRNNYLHALSTMHHLRV 197
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
++ V + LPMFH NGW + A G + +CLRK D I+ + H T + A V
Sbjct: 198 TDKDVLVHVLPMFHVNGWGSPFYYTANGASQVCLRKADPETIFQALMKHNGTVLHMAPTV 257
Query: 177 LN-MLSSSPSTK-PLDRPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSC 233
LN +L S+K P V+++ +G++PP A + + E LG+ YG+TE++
Sbjct: 258 LNSLLQYHGSSKLPAGGDVRVVIAGSAPPPAFVAKAERELGWEFIQVYGMTESSPLSTIS 317
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
+ +S + L + E+ R+KA+ G IG ++ VV E G +V++DG+ GE++ RS +M
Sbjct: 318 SIRSHLSNLPEEEQYRMKAKAGYSMIG-CEVKVV-DENGEAVRYDGKQIGEVITRSNGVM 375
Query: 294 LGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
GY K++E + +R W +TGD+ V G ++I DR KD+IISGGENISS EVE VL
Sbjct: 376 KGYWKNEEATMEAIRGG-WLFTGDMATVDLHGNIDIVDRKKDIIISGGENISSIEVEGVL 434
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVI 413
Y +PA+ E A++A + WG+ P AF+ +K E ++ E+ I+ F R RL H+ A V
Sbjct: 435 YDHPAVLEAAVIAVPHEKWGETPHAFI-VKKEDAEIAAEDFIL-FTRERLAHFKAITGVT 492
Query: 414 IEDELPKTATGKIQKFVLRE 433
ELPKTA+GKIQK LR+
Sbjct: 493 FVKELPKTASGKIQKIRLRQ 512
>gi|119496593|ref|XP_001265070.1| AMP-binding domain protein, putative [Neosartorya fischeri NRRL
181]
gi|119413232|gb|EAW23173.1| AMP-binding domain protein, putative [Neosartorya fischeri NRRL
181]
Length = 576
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/459 (35%), Positives = 245/459 (53%), Gaps = 40/459 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL ++ + HS+++++ VD + PL A + P PV++ D AT
Sbjct: 120 RLKEDDIAYIFTHSDAEVIIVDKEYLPLLQAYRAAKPD-----IPVIVDTDTDATEGQLS 174
Query: 65 GHPNFKWV--------------------QPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
G P + V Q SE D +AL YTSGTT+ PKGV HRG +
Sbjct: 175 G-PFDEAVLLGLKYDADTGAKGWDGLESQAASEDDVIALAYTSGTTARPKGVEFTHRGCY 233
Query: 105 IITVSSLIDWRIPNQP---VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSV 161
+ ++++I+ + Q +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+ +
Sbjct: 234 LAALANVIESGLNFQQGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPEIWRL 293
Query: 162 IKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHS 220
+K +TH A V +L ++ L RPV++ T ASPP L + +L H
Sbjct: 294 LKQEHITHFNAAPTVNTLLCAANEAGRLPRPVQV-TVAASPPTPHLFEQMTNLNLHPVHV 352
Query: 221 YGLTETAGFVVSCAWKSQWNTLADTERARLKARQG---VRTIGLADMDVVHPE-TGMSVK 276
YG+TET G + + QW+ L E+ + ARQG V ++ + + PE T + V+
Sbjct: 353 YGMTETYGPITKGYYMPQWDQLPAEEKYKKMARQGHGFVTSLPVRVIKTDVPEGTIIDVQ 412
Query: 277 HDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDV 336
DG+ GEI F GY KD E + ++GD+ V H DG ++I DR+KD+
Sbjct: 413 RDGKEIGEIAFVGNICSRGYYKDPEATRKLFA-GGVLHSGDLAVWHPDGAVQILDRAKDI 471
Query: 337 IISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAII 396
IISGGENISS +ES+L +P I E +VA D WG+RP AFV++K K+ + +I
Sbjct: 472 IISGGENISSVALESMLVTHPDILEAGVVAVPDAHWGERPKAFVTVKQ--GKQIDGKEVI 529
Query: 397 EFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + + +M + V + ELPKT+TGK++K VLRE
Sbjct: 530 AWAKKHSAISKFMVPREVEVVAELPKTSTGKVRKNVLRE 568
>gi|322701633|gb|EFY93382.1| AMP-binding domain protein [Metarhizium acridum CQMa 102]
Length = 567
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 239/457 (52%), Gaps = 38/457 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL ++ + H+E + VD + L A P+ P+++ D AT P+
Sbjct: 113 RLKADDIAYIFEHAEVDAIIVDKEFEGLLGAFTKKHPN-----VPLIVDLDTDATEGPSC 167
Query: 65 GHPN---------------FKWVQPES----EWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G N W +S E D +A+ +TSGTTS PKGVV+ HRG ++
Sbjct: 168 GQFNEAILEGLAYDEELGGHAWAGLQSKATNEDDMLAIPFTSGTTSRPKGVVYTHRGAYL 227
Query: 106 ITVSSLIDWRIPNQPV--FLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
+ ++I+ + NQ +LWTLPMFH GW++ W + AV G N+CLRK+D P+I+ ++K
Sbjct: 228 AAMGNIIESGL-NQGRCRYLWTLPMFHAMGWTFPWSVVAVRGLNVCLRKIDYPLIWKLLK 286
Query: 164 HHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLR-TESLGFVVSHSYG 222
G+TH A V +L ++ L PV++ T ASPP+A L +L + H YG
Sbjct: 287 EEGITHFNAAPTVNTLLVAAKEAVKLPNPVQV-TVAASPPSAHLFELMTNLNLMPVHVYG 345
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKHD 278
+TET G + C +W+ L ++ ARQG + + ++ P+ + V +
Sbjct: 346 MTETYGPITKCYHLPEWDNLPPQQKYAKMARQGHGFVTSLPIRIIKPDQPEGVLIDVAKN 405
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
GQ GEIVF Y KD E S ++GD+ V H DG +I DR+KD+II
Sbjct: 406 GQEIGEIVFIGNICAKEYFKDAEASRKLFA-GGVLHSGDLAVWHPDGSAQILDRAKDIII 464
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ESVL +P I E +VA + WG+ P A+V++K K E +I +
Sbjct: 465 SGGENISSVALESVLVQHPDILEAGVVAIPNDHWGEVPKAYVTVKE--GKTIRGEDVISW 522
Query: 399 CR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + +M K V + ELPKT+TGKI+K LRE
Sbjct: 523 AKHQSNISRFMVPKEVEVVKELPKTSTGKIKKNDLRE 559
>gi|389847283|ref|YP_006349522.1| medium-chain acyl-CoA ligase [Haloferax mediterranei ATCC 33500]
gi|448617060|ref|ZP_21665715.1| medium-chain acyl-CoA ligase [Haloferax mediterranei ATCC 33500]
gi|388244589|gb|AFK19535.1| medium-chain acyl-CoA ligase [Haloferax mediterranei ATCC 33500]
gi|445748409|gb|ELZ99855.1| medium-chain acyl-CoA ligase [Haloferax mediterranei ATCC 33500]
Length = 543
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 162/450 (36%), Positives = 234/450 (52%), Gaps = 29/450 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +++ +K + DY+ + A P+ V D A +S
Sbjct: 89 RLTPNELDYIVNDCGAKAIVADYEYTEKIDAIRDEIPTEVF----VTTDADAVAGASTAG 144
Query: 65 GHPNFKWV----QPES-------EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
+F V P++ E D A+NYTSGTT +PKGVV HR I T +S+
Sbjct: 145 AWEDFDTVVADTDPDTYDRPSMDEADIAAINYTSGTTGNPKGVVMSHRAEAIHTYTSVAH 204
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
I + V+LWTLPMFH NGW + + + +G T++C R V I+ I V+++C A
Sbjct: 205 QEIRDDDVYLWTLPMFHANGWGHIFSLTGMGATHVCTRGVGPADIFETIVEADVSYLCAA 264
Query: 174 LVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETA 227
V+NML P T D P++I + GA+PP A + E G+ YGLTET
Sbjct: 265 PTVMNMLVDYYREHEPETLG-DNPLRIASGGAAPPEATIRTLEDEFGWHFKQMYGLTETG 323
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
+VS ++ ++ +D+ R +K + G+ +G ++ VV E G V DG+S GE+V
Sbjct: 324 PLIVSSDFRRFYDDDSDS-RFAIKKKTGIGFMG-CEVAVVD-EDGEMVPRDGESIGEVVV 380
Query: 288 RSGSIMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
R I+ Y + + D WF+TGD+ V G+L I+DR KD+IISGGENIS
Sbjct: 381 RGNQILEAYWDKPKETEKAFNDRIKGWFHTGDLATVDERGFLTIQDRKKDIIISGGENIS 440
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARL 403
S E+E VL+ +PA++EVA+V + WG+ P AFV ++ P TE + F R L
Sbjct: 441 SLELEDVLHDHPAVSEVAIVPTPSERWGESPKAFVLPTTGDAQNPGVTETELESFMRESL 500
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y K V + LP TATGKIQKF LR+
Sbjct: 501 AGYKVVKEVEFVESLPTTATGKIQKFELRK 530
>gi|239606818|gb|EEQ83805.1| AMP-binding domain-containing protein [Ajellomyces dermatitidis
ER-3]
gi|327351287|gb|EGE80144.1| AMP-binding domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 581
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/456 (34%), Positives = 243/456 (53%), Gaps = 36/456 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + ++ + +HSE++++ VD + PL L F T P++I D A
Sbjct: 123 RLKPEDIAYIFNHSEAEVIIVDKEFVPL----LDEF-KKTNGHVPLIIDTDTDAIEGELS 177
Query: 65 G---------------HPNFKW----VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G N W Q E +AL YTSGTTS PKGV + HR ++
Sbjct: 178 GPFDQAVLEGLSFDTTSGNHGWQGLEAQTPDEDALIALAYTSGTTSRPKGVEYIHRSCYM 237
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
T++++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P+I+ ++
Sbjct: 238 ATLANIIESGLNSSQGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPLIWKLL 297
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
K +TH C A V +L SS + L PV++ + + P + + +L H YG
Sbjct: 298 KEEDITHYCAAPTVNTILCSSKEAEVLPNPVRVTVAASPPTPHLFEQMTNLNLHPVHVYG 357
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVKHD 278
LTET G + + QW+ + E+ + ARQG + + V+ E T + V+ +
Sbjct: 358 LTETYGPITKGYYLPQWDNIPTEEKYKKMARQGHGFLTSLPVRVIKTEVPEGTVIDVEKN 417
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
G+ GEIVF GY K++E + ++GD+ V H DG ++I DR+KD+II
Sbjct: 418 GEEMGEIVFVGNICARGYYKNEEETKKLF-SGGVLHSGDLAVWHPDGAIQILDRAKDIII 476
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ES+L +P I E +VA D WG+RP AF+++ K+ + +IE+
Sbjct: 477 SGGENISSVALESMLATHPDILEAGVVAVPDSHWGERPKAFITV--HAGKQLEGKDVIEW 534
Query: 399 CR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
+ + + +M + V + ELPKT+TGK++K VLR
Sbjct: 535 AKHVSGISRFMVPREVEVVRELPKTSTGKLKKNVLR 570
>gi|448640820|ref|ZP_21677607.1| medium-chain acyl-CoA ligase [Haloarcula sinaiiensis ATCC 33800]
gi|445761345|gb|EMA12593.1| medium-chain acyl-CoA ligase [Haloarcula sinaiiensis ATCC 33800]
Length = 533
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 227/441 (51%), Gaps = 21/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP-KPVLIHDDVSATSSPT 63
RLD ++ +L+ E+ + DY + P+ T + +P I + A S
Sbjct: 89 RLDPAKIEYILNDCEAATVIADYDFAEKVQPVRDDIPAETFIGYEPDRIDGEWEAYSGIL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
G P + +P+ +E D ++NYTSGTT PKGVV HR ++ I + +
Sbjct: 149 DGQPTAEPDRPDMTEDDDASINYTSGTTGDPKGVVRTHRTESWHSLVLNQHMEIRDDDTY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW +++ + GGT++C R D + ++ + V+ +CGA VLN L
Sbjct: 209 LWTLPMFHCNGWGHTYAITGTGGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQ 268
Query: 181 ----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
+ DR V+I T+G++P A + R E G+ + H YGLTETA + +
Sbjct: 269 HYRANDGDVVTQGDRDVRIATAGSAPATATIERVEDEFGWRIIHIYGLTETAPIITTSNS 328
Query: 236 KSQWNTLADTERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+ ER R LK +QG T+ D+ +V E G V DG + GE+V + +M
Sbjct: 329 PRRI-----AERGRELKVKQGSETL-CTDIRIVD-EDGTDVPRDGATIGEVVVQGNQVMD 381
Query: 295 GYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
YL E + D +F+TGD+ DG ++I DR KD+IISGGENISS E+E
Sbjct: 382 RYLNKPEITEEAFNDRAEGYFHTGDLAAWDEDGMIQIMDRRKDIIISGGENISSIELEDE 441
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P + + A++ + WG+ P A V TE+ I+EF R R+ Y +
Sbjct: 442 LYDHPGVLKAAVIPTPSEDWGETPMAIVVPT--ADSDATEQDILEFLRERVASYKVPAGI 499
Query: 413 IIEDELPKTATGKIQKFVLRE 433
D LP+TATGKIQK+ LRE
Sbjct: 500 DFRDSLPETATGKIQKYELRE 520
>gi|121702597|ref|XP_001269563.1| AMP-binding domain protein, putative [Aspergillus clavatus NRRL 1]
gi|119397706|gb|EAW08137.1| AMP-binding domain protein, putative [Aspergillus clavatus NRRL 1]
Length = 577
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 244/457 (53%), Gaps = 36/457 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL ++ + +HS+++++ VD + PL A + P+ P++I D AT
Sbjct: 121 RLKEDDIAYIFNHSDAEVIIVDQEYVPLLQAYRAAHPNT-----PIIIDTDTDATEGQLS 175
Query: 65 GH------PNFKW-------------VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G K+ Q SE D +AL YTSGTT+ PKGV + HRG ++
Sbjct: 176 GPFDEAVLQGLKYDIETGSNGWDGLESQAGSEDDIIALAYTSGTTARPKGVEYTHRGCYL 235
Query: 106 ITVSSLIDWRIPNQ---PVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
T+ ++I+ + Q +LWTLPMFH GW++ W + AV GT+ CLRK++ P I+ ++
Sbjct: 236 ATLGNVIESGLNTQFGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKINYPEIWQLL 295
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
K +TH A V +L ++ + L PV++ + + P + + SL H YG
Sbjct: 296 KQEHITHFNAAPTVNTLLCAADEAERLPNPVQVTVAASPPTPHLFEQMTSLNLHPVHVYG 355
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVH---PE-TGMSVKHD 278
+TET G + + QW+ L ++ + ARQG + + ++ PE T + V+ +
Sbjct: 356 MTETYGPITKGYYMPQWDQLPAEQKYKNMARQGHGFLTSLPVRIIKTDVPEGTVVDVERN 415
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
G+ GEIVF GY KD E + ++GD+ V H DG ++I DR+KD+II
Sbjct: 416 GKEIGEIVFVGNICSPGYYKDPEATRKLFA-GGVLHSGDLAVWHPDGAIQILDRAKDIII 474
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ES+L +P I E +VA D WG+RP A+V++K K+ + +I +
Sbjct: 475 SGGENISSVALESMLVTHPDILEAGVVAVPDTHWGERPKAYVTVKH--GKQLEGQDVIAW 532
Query: 399 CRAR--LPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + +M + V + ELPKT+TGK++K VLRE
Sbjct: 533 AKGHRAISKFMVPREVEVVPELPKTSTGKLRKNVLRE 569
>gi|297600802|ref|NP_001049879.2| Os03g0305000 [Oryza sativa Japonica Group]
gi|255674445|dbj|BAF11793.2| Os03g0305000 [Oryza sativa Japonica Group]
Length = 252
Score = 246 bits (629), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 166/241 (68%), Gaps = 7/241 (2%)
Query: 196 LTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQG 255
+T+GA+PP +VL LGF ++H+YGL+ET G CAWK +W+ L D ERARL ARQG
Sbjct: 1 MTAGAAPPPSVLASMSKLGFRITHTYGLSETYGPSTVCAWKPEWDELPDDERARLHARQG 60
Query: 256 VRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYT 315
+R +GL +DVV P+T V DG + GEIV R +M GYLK+ ++ +N WF++
Sbjct: 61 IRYVGLEGLDVVDPKTMAPVPADGSTLGEIVMRGNGVMKGYLKNPRANAEAF-ENGWFHS 119
Query: 316 GDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKR 375
GD+GV H+DGY+E+KDR+KD+IISGGENISS EVE +Y +PA+ E ++VA+ D+ WG+
Sbjct: 120 GDLGVKHTDGYIEVKDRAKDIIISGGENISSLEVEKAVYQHPAVLEASVVARADEQWGES 179
Query: 376 PCAFVSLKWELSKKPTEEA----IIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVL 431
PCAFV+ K + + E A I+ FCR RLP Y KSV+ LPKTATGKI+K L
Sbjct: 180 PCAFVTPK-DGADSSDEAALAGDIMRFCRERLPGYWVPKSVVF-GPLPKTATGKIKKHEL 237
Query: 432 R 432
R
Sbjct: 238 R 238
>gi|110742545|dbj|BAE99188.1| AMP-binding protein [Arabidopsis thaliana]
Length = 321
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 120/216 (55%), Positives = 151/216 (69%), Gaps = 18/216 (8%)
Query: 1 NVIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS 60
N+ RLD + VSVLL H SKLLFVD S LA+ A+S+ ++ P V I D
Sbjct: 94 NINTRLDARTVSVLLRHCGSKLLFVDVFSVDLAVEAISMMTTDP--PILVFIADKEEEGG 151
Query: 61 SPTV----------------GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
V G +FKW++PESEWDP+ LNYTSGTTS+PKGVVHCHRG+F
Sbjct: 152 DADVADRTKFSYTYDDLIHRGDLDFKWIRPESEWDPVVLNYTSGTTSAPKGVVHCHRGIF 211
Query: 105 IITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKH 164
++++ SLIDW +P PV+LWTLP+FH NGWSY WG+AAVG TN+CLRK D P+IY +I+
Sbjct: 212 VMSIDSLIDWTVPKNPVYLWTLPIFHANGWSYPWGIAAVGETNVCLRKFDAPLIYRLIRD 271
Query: 165 HGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGA 200
HGVTH+CGA VVLNMLS++ +PL+RPV ILT+GA
Sbjct: 272 HGVTHMCGAPVVLNMLSATNEFQPLNRPVNILTAGA 307
>gi|344211141|ref|YP_004795461.1| medium-chain acyl-CoA ligase [Haloarcula hispanica ATCC 33960]
gi|343782496|gb|AEM56473.1| medium-chain acyl-CoA ligase [Haloarcula hispanica ATCC 33960]
Length = 533
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 226/441 (51%), Gaps = 21/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP-KPVLIHDDVSATSSPT 63
RLD ++ +L+ E+ + DY + P+ T + +P I + A S
Sbjct: 89 RLDPAKIEYILNDCEAATVIADYDFAEKVQPVRDDIPAETFIGYEPDRIDGEWEAYSGIL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
G P + +P+ +E D ++NYTSGTT PKGVV HR + I + +
Sbjct: 149 DGQPTAEPDRPDMAEDDDASINYTSGTTGDPKGVVRTHRTESWHALVLNQHMEIRDDDTY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW +++ + GGT++C R D + ++ + V+ +CGA VLN L
Sbjct: 209 LWTLPMFHCNGWGHTYAITGTGGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQ 268
Query: 181 ----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
+ DR V+I T+G++P A + R E G+ + H YGLTETA + +
Sbjct: 269 HYRANDGDVVTQGDRDVRIATAGSAPATATIERVEDEFGWRIIHIYGLTETAPIITTSNS 328
Query: 236 KSQWNTLADTERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+ ER R LK +QG + D+ VV E G V HDG + GE+V + +M
Sbjct: 329 PRRI-----AERGRELKVKQGSEAL-CTDIRVVD-EDGTDVPHDGTAIGEVVVQGNQVMD 381
Query: 295 GYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
YL E + D +F+TGD+ DG ++I DR KD+IISGGENISS E+E
Sbjct: 382 RYLNKPEITEEAFNDRVEGYFHTGDLATWDEDGMIQIMDRRKDIIISGGENISSIELEDE 441
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P + + A++ + WG+ P A V TE+ I+EF R R+ Y +
Sbjct: 442 LYDHPDVLKAAVIPAPSEDWGETPMAIVVPT--ADSDVTEQDILEFLRERVASYKVPAGI 499
Query: 413 IIEDELPKTATGKIQKFVLRE 433
D LP+TATGKIQK+ LRE
Sbjct: 500 DFRDSLPETATGKIQKYELRE 520
>gi|410460905|ref|ZP_11314558.1| AMP-dependent synthetase and ligase [Bacillus azotoformans LMG
9581]
gi|409926110|gb|EKN63306.1| AMP-dependent synthetase and ligase [Bacillus azotoformans LMG
9581]
Length = 533
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 165/442 (37%), Positives = 249/442 (56%), Gaps = 28/442 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVD----YQSSPLALAALSLFPSNTILPKPVLIH------D 54
RL + +L+HSE+K+L D +Q +P+ ++ + VLIH +
Sbjct: 89 RLTPEDYLFILNHSETKILVCDQELYHQIAPIREKLQTV--------ESVLIHYADETCE 140
Query: 55 DVSATSSPTVGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
D++ + N ++ +PE E D +L YTSGTT +PKGV+ HR + +S
Sbjct: 141 DINYDQWLSRFSSN-RFDRPEMDEQDVCSLLYTSGTTGNPKGVMLTHRNNYFHALSVQHH 199
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
R+ ++ L LPMFH NGW + A G T + LRK+ I +++ H V+ + A
Sbjct: 200 LRVSDKDTLLHILPMFHVNGWGSPFYYTANGATQVMLRKIVPETIMDLVQKHKVSVMHMA 259
Query: 174 LVVLN-MLSSSPSTKP-LDRPVKILTSGASP-PAAVLLRTESLGFVVSHSYGLTETAGFV 230
VLN +L KP D V+I+ +G++P PA V E +G+ YG+TE++
Sbjct: 260 PTVLNGLLQYYDQKKPTFDHDVRIVIAGSAPAPAFVTKVEEEIGWEFIQVYGMTESSPLS 319
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+ + L ++ RLKA+ G++ IG ++ VV+ + G V +GQ GE++ RS
Sbjct: 320 LFSPIRPHLEDLTKEQKYRLKAKAGIQMIG-CEVKVVN-DLGDEVAWNGQEIGEVITRSN 377
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
S+M GY K+++ + ++D W +TGD+G V G +EI DR KD+IISGGENISS EVE
Sbjct: 378 SVMKGYWKNEQATMETIQDG-WLHTGDMGTVDEYGTIEIVDRKKDIIISGGENISSIEVE 436
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VLY +P+I E A+VA + WG+ P AFV +K ++ TEE +I+F R++L H+ A
Sbjct: 437 GVLYEHPSILEAAVVALPHEKWGETPHAFVVVKEGVA--LTEEEVIQFSRSKLAHFKAVT 494
Query: 411 SVIIEDELPKTATGKIQKFVLR 432
V DELPKTA+GKIQK LR
Sbjct: 495 GVTFVDELPKTASGKIQKIHLR 516
>gi|448651270|ref|ZP_21680339.1| medium-chain acyl-CoA ligase [Haloarcula californiae ATCC 33799]
gi|445770797|gb|EMA21855.1| medium-chain acyl-CoA ligase [Haloarcula californiae ATCC 33799]
Length = 533
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/441 (34%), Positives = 225/441 (51%), Gaps = 21/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP-KPVLIHDDVSATSSPT 63
RLD ++ +L+ E+ + DY + P+ T + +P I D
Sbjct: 89 RLDPAKIEYILNDCEAATVIADYDFAEKVQPVRDDIPAETFIGYEPDRIDGDWEGYGDVL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
G P + +P+ +E D ++NYTSGTT PKGVV HR ++ I + +
Sbjct: 149 DGQPTAEPDRPDMTEDDDASINYTSGTTGDPKGVVRTHRTESWHSLVLNQHMEIRDDDTY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW +++ + GGT++C R D + ++ + V+ +CGA VLN L
Sbjct: 209 LWTLPMFHCNGWGHTYAITGTGGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQ 268
Query: 181 ----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
+ DR V+I T+G++P A + R E G+ + H YGLTETA + +
Sbjct: 269 HYRANDGDVVTQGDRDVRIATAGSAPATATIERVEDEFGWRIIHIYGLTETAPIITTSNS 328
Query: 236 KSQWNTLADTERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+ ER R LK +QG T+ D+ +V E G V DG + GE+V + +M
Sbjct: 329 PRRI-----AERGRELKVKQGSETL-CTDIRIVD-EDGTDVPRDGATIGEVVVQGNQVMD 381
Query: 295 GYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
YL E + D +F+TGD+ DG ++I DR KD+IISGGENISS E+E
Sbjct: 382 RYLNKPEITEEAFNDRAEGYFHTGDLAAWDEDGMIQIMDRRKDIIISGGENISSIELEDE 441
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P + + A++ + WG+ P A V TE+ I+EF R R+ Y +
Sbjct: 442 LYDHPGVLKAAVIPTPSEDWGETPMAIVVPT--ADSDATEQDILEFLRERVASYKVPAGI 499
Query: 413 IIEDELPKTATGKIQKFVLRE 433
D LP+TATGKIQK+ LRE
Sbjct: 500 DFRDSLPETATGKIQKYELRE 520
>gi|336271641|ref|XP_003350579.1| hypothetical protein SMAC_02292 [Sordaria macrospora k-hell]
gi|380090244|emb|CCC12071.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 574
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 212/367 (57%), Gaps = 12/367 (3%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI---PNQPVFLWTLPMFHEN 132
+E D +A+ +TSGTTS PKG V+ HRG ++ T++++I+ + + +LWTLPMFH
Sbjct: 199 NEDDMIAIPFTSGTTSKPKGCVYTHRGAYLATLANVIEAGLNVADGRSKYLWTLPMFHAV 258
Query: 133 GWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRP 192
GW++ W + AV GT++CLRK+D P+I+ ++K GVTH C A V +L ++ + L +P
Sbjct: 259 GWTFPWAVCAVRGTHVCLRKIDYPLIWKLLKEEGVTHFCAAPTVNTLLCAAKEAEVLPKP 318
Query: 193 VKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLK 251
V++ T ASPP L + SL H YGLTET G + W+ L E+
Sbjct: 319 VRV-TVAASPPTPHLFEQMTSLNLFPVHVYGLTETYGPITRGYILPSWDNLPPHEKYAKM 377
Query: 252 ARQGVRTIGLADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCM 307
ARQG I + ++ P+ + V+ +G+ GEI F GY KD E +
Sbjct: 378 ARQGHGFITSLPVRIIKPDQPEGVLIDVEKNGKEVGEICFMGNICCKGYYKDPEATRKLF 437
Query: 308 RDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQ 367
+TGD+ V DG + I+DR+KD+IISGGENISS +ES+L +P I E +VA
Sbjct: 438 AGGA-LHTGDLAVWAPDGSIHIQDRAKDIIISGGENISSVALESMLAEHPDILEAGVVAV 496
Query: 368 RDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATGK 425
D WG+RP A+++LK T + +I++ + + + +M + V I ELPKT+TGK
Sbjct: 497 PDSHWGERPKAYITLKEGRETSLTGQDVIDWAKHNSSISKFMVPREVEIVKELPKTSTGK 556
Query: 426 IQKFVLR 432
I+K LR
Sbjct: 557 IKKNELR 563
>gi|298704733|emb|CBJ28329.1| acyl-CoA synthase [Ectocarpus siliculosus]
Length = 546
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 166/445 (37%), Positives = 226/445 (50%), Gaps = 48/445 (10%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RLD + V+ L H+ESKLL VD + + +A AL + + P + D + A S T
Sbjct: 116 RLDARAVAFQLEHAESKLLIVDCELAGIAKDALEMIEDESKRPHLIQAEDPMHAEWSATD 175
Query: 64 ---------VGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDW 114
G PNF+ E E D +AL+YTSGTT +PKGV+ HRG + ++S I W
Sbjct: 176 GEELRDFMRTGDPNFELPGAEHEDDAIALSYTSGTTGNPKGVLTHHRGAALNSMSVSITW 235
Query: 115 RIPNQPV-FLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ V +LWTLPMFH NGW W + AV +
Sbjct: 236 PLVGGDVKYLWTLPMFHCNGWCLPWAITAV--------------------------VMNL 269
Query: 174 LVVLNMLSSSPSTKPLD-RPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVV 231
L+ +P T+ + R ++++T GA+PP +V+ E LG +YGLTE G
Sbjct: 270 LLGATEEEKAPVTERMPPRVIQMMTGGAAPPPSVMRELEQELGIRPLSAYGLTEVYGPCT 329
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGM-SVKHDGQSQGEIVFRSG 290
S W W+ L + ER AR + L V + G +V DG + GE++ R
Sbjct: 330 SNLWDDSWDDLEEDERG---ARLPWQAPSLVHEMYVAEKGGFDAVPADGVTLGEVLLRGN 386
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
++M GYL ++E + WF TGD+ V H G +EIKDR KD+IISGGENISS EVE
Sbjct: 387 AVMKGYLNNEEATKEAFDQGQWFRTGDMAVQHPGGRVEIKDREKDIIISGGENISSIEVE 446
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
+ L+ + + VA+VA D FWG+ P A + K K + E II R+ L + K
Sbjct: 447 TALHQHEGVLHVAVVALPDPFWGETPVAVIEAK--PGAKVSGEDIISHARSILAKFKCPK 504
Query: 411 SVI---IEDELPKTATGKIQKFVLR 432
I I ELPKTATGKIQK VLR
Sbjct: 505 CPIKDVIFRELPKTATGKIQKHVLR 529
>gi|448311497|ref|ZP_21501258.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
gi|445604828|gb|ELY58770.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
Length = 537
Score = 245 bits (625), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 159/445 (35%), Positives = 228/445 (51%), Gaps = 25/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + LL S +K + D + A + P +P + I +DV
Sbjct: 89 RLTPEDYEYLLSDSGAKAIIADSEY------ADKIEPIRDEVPTEIFITNDVDDVDGDWE 142
Query: 65 GHPNF------KWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
G + ++ +PE SE D + +NYTSGTT PKGV+ HR + I I
Sbjct: 143 GFDDLIDGLEPEYDRPEMSEDDVITINYTSGTTGDPKGVMRTHRTESLHAQLVTIHHEIR 202
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
+ V+LWTLPMFH NGW + + + +G ++C R VD I+ I V+ +C A VL
Sbjct: 203 DDDVYLWTLPMFHVNGWGHIYAITGMGAKHVCTRGVDAAEIFRQIVDEDVSFLCCAPTVL 262
Query: 178 NMLSSSPSTKPL----DRPVKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTETAGFVVS 232
+ML + D P+++ +GA+PP AV+ E G+ YG TET + +
Sbjct: 263 SMLGEYYEEHDVQTDGDNPMRVTAAGAAPPEAVIETVEEEFGWHFRQLYGATETGPLIGT 322
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
A + + +D +R LK RQG+ LA V E G V D ++ GEI+ R +
Sbjct: 323 SATRRLIDEDSD-DRFALKKRQGIAP--LATEVAVVDEDGTEVPWDDETIGEILVRGNQV 379
Query: 293 MLGYLK--DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
M GY + D + + + WF+TGD+ VV+ DG L I+DR KD+IISGGENISS E+E
Sbjct: 380 MEGYWEKPDATEEAFTEKRDGWFHTGDLAVVNEDGMLSIQDREKDIIISGGENISSIELE 439
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMA 408
L+ +PA+++VA++ WG+ P AFV E P + + + F R RL Y
Sbjct: 440 DTLFDHPAVSDVAVIPAPSDQWGETPKAFVVPSNENPDDPPVSADELTAFTRERLAGYKV 499
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
V DELP TATGKIQK+ LRE
Sbjct: 500 VHRVEFVDELPTTATGKIQKYELRE 524
>gi|261197577|ref|XP_002625191.1| AMP-binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239595821|gb|EEQ78402.1| AMP-binding domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 600
Score = 244 bits (624), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 160/457 (35%), Positives = 244/457 (53%), Gaps = 38/457 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + ++ + +HSE+ ++ VD + PL L F T P++I D A
Sbjct: 142 RLKPEDIAYIFNHSEADVIIVDKEFVPL----LDEF-KKTNGHVPLIIDTDTDAIEGELS 196
Query: 65 G---------------HPNFKW----VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G N W Q E +AL YTSGTTS PKGV + HR ++
Sbjct: 197 GPFDQAVLEGLSFDTTSGNHGWQGLEAQTPDEDALIALAYTSGTTSRPKGVEYIHRSCYL 256
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
T++++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK++ P+I+ ++
Sbjct: 257 ATLANIIESGLNSSQGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKINYPLIWKLL 316
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSY 221
K +TH C A V +L SS + L PV++ T ASPP L + +L H Y
Sbjct: 317 KEEDITHYCAAPTVNTILCSSKEAEVLPNPVRV-TVAASPPTPHLFEQMTNLNLHPVHVY 375
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVKH 277
GLTET G + + QW+ + E+ + ARQG + + V+ E T + V+
Sbjct: 376 GLTETYGPITKGYYLPQWDNIPTEEKYKKMARQGHGFLTSLPVRVIKTEVPEGTVIDVEK 435
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
+G+ GEIVF GY K++E + ++GD+ V H DG ++I DR+KD+I
Sbjct: 436 NGEEMGEIVFVGNICARGYYKNEEETKKLF-SGGVLHSGDLAVWHPDGAIQILDRAKDII 494
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +ES+L +P I E +VA D WG+RP AF+++ K+ + +IE
Sbjct: 495 ISGGENISSVALESMLATHPDILEAGVVAVPDSHWGERPKAFITV--HAGKQLEGKDVIE 552
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLR 432
+ + + + +M + V + ELPKT+TGK++K VLR
Sbjct: 553 WAKHVSGISRFMVPREVEVVRELPKTSTGKLKKNVLR 589
>gi|448397547|ref|ZP_21569580.1| AMP-dependent synthetase and ligase [Haloterrigena limicola JCM
13563]
gi|445672646|gb|ELZ25217.1| AMP-dependent synthetase and ligase [Haloterrigena limicola JCM
13563]
Length = 537
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 231/446 (51%), Gaps = 27/446 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPV-------LIHDDVS 57
RL + LL+ S++K + DY+ + A P+ + DD+
Sbjct: 89 RLTPEDYEYLLNDSDTKAIIADYEYADKIEAIRDDVPTEIFITNDADEVEGDWEDFDDLI 148
Query: 58 ATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
A P P SE D + +NYTSGTT PKGV+ HR + I I
Sbjct: 149 ADVEPDYERPEM------SEDDVITINYTSGTTGDPKGVMRTHRTESLHAQLVTIHHEIS 202
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
+ V+LWTLPMFH NGW + + + +G ++C R VD I+ I V+ +C A VL
Sbjct: 203 DDDVYLWTLPMFHVNGWGHIYAITGIGAKHVCTRGVDAEEIFQQINDEDVSFLCCAPTVL 262
Query: 178 NMLSSSPSTKPL----DRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFVV 231
+ML + D P+++ +GA+PP +V +RT E+ G+ YG TET +
Sbjct: 263 SMLDEYYEENDVSTEGDNPMRVTAAGAAPPESV-IRTVEETFGWHFRQLYGATETGPLIG 321
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
+ A + + ++ ER LK RQG+ + +++VV + G V D +S GEI+ R
Sbjct: 322 TSATRRLIDEDSE-ERFGLKKRQGIAPLA-TEIEVVD-DDGNEVPWDDESIGEILVRGNQ 378
Query: 292 IMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M GY + E + D WF+TGD+ VV+ G L I+DR KD+IISGGENISS E+
Sbjct: 379 VMEGYWEKPEETEEAFNDKREGWFHTGDLAVVNEKGMLSIQDREKDIIISGGENISSIEL 438
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYM 407
E L+ + A+ +VA++ + WG+ P AFV + + P +E+ + EF R RL Y
Sbjct: 439 EDTLFDHEAVADVAVIPSPSEKWGETPKAFVVPSNDDPQNPPVSEDELTEFTRERLAGYK 498
Query: 408 AHKSVIIEDELPKTATGKIQKFVLRE 433
V + LPKTATGKIQK+ L+E
Sbjct: 499 VVHRVEFVNSLPKTATGKIQKYELQE 524
>gi|350630651|gb|EHA19023.1| hypothetical protein ASPNIDRAFT_187366 [Aspergillus niger ATCC
1015]
Length = 589
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 161/457 (35%), Positives = 235/457 (51%), Gaps = 36/457 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT----S 60
RL ++ + HSE++++ VD + PL P P+++ D A S
Sbjct: 134 RLKEDDIAYIFTHSEAEVIIVDKEFLPLLRVYRDAKPET-----PIIVDTDTDAAEGQLS 188
Query: 61 SP-----------TVGHPNFKW----VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
P + N W Q SE D +AL YTSGTTS PKGV + +RG ++
Sbjct: 189 GPFDEAVLEGLKYDIATGNKGWEGLESQAGSEDDVIALAYTSGTTSRPKGVEYTNRGAYL 248
Query: 106 ITVSSLIDWRIP---NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
+ ++++ + + +LW LPMFH GW++ W + A GT+ CLRKVD I+ +
Sbjct: 249 AALGNVVESGLNVFNGRCRYLWILPMFHAVGWTFPWAVTAARGTHYCLRKVDYGQIWKLF 308
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
K G+TH A V +L + P + L PV + +G+ P + + SL H YG
Sbjct: 309 KTEGITHFNAAPTVNTLLCNHPDAERLSTPVIVQVAGSPPTPHLFEQMTSLNLRPVHVYG 368
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVH---PE-TGMSVKHD 278
+TET G C W+ L E+ R ARQG + V+ PE T + VK D
Sbjct: 369 MTETYGPTTRCYMLPAWDQLPRDEKFRRMARQGHGFLTSLPTRVIKTDVPEGTIIDVKRD 428
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
G+ GEI F GY KD E + ++GD+ V H DG ++I DR+KD+II
Sbjct: 429 GKEIGEIAFVGNICAQGYYKDAEATRKLFA-GGVLHSGDLAVWHPDGAIQILDRAKDIII 487
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ES+L +P I EV +VA D WG+RP AFV+ K + E +I++
Sbjct: 488 SGGENISSVALESMLVTHPDILEVGVVAVPDTHWGERPKAFVTTKQGRHLEGKE--VIDW 545
Query: 399 CR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
R +++ +M + V + ELPKT+TGKI+K VLR+
Sbjct: 546 ARNQSQISKFMLPREVEVVAELPKTSTGKIRKNVLRD 582
>gi|212527812|ref|XP_002144063.1| AMP-binding domain protein, putative [Talaromyces marneffei ATCC
18224]
gi|210073461|gb|EEA27548.1| AMP-binding domain protein, putative [Talaromyces marneffei ATCC
18224]
Length = 577
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 166/468 (35%), Positives = 249/468 (53%), Gaps = 40/468 (8%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPK-PVLIHDDVSATS 60
V RL + +S + HS+++L+ VD + L L LF S P P+L+ D AT
Sbjct: 117 VNYRLKPEDISYIFDHSDAELIIVDEEYVSL----LDLFRSEH--PDVPLLVDTDTDATE 170
Query: 61 SPTVGHPNFKWV-------------------QPESEWDPMALNYTSGTTSSPKGVVHCHR 101
G + + Q E +AL YTSGTT+ PKGV + HR
Sbjct: 171 GQLSGPFDAAILEGLEHDRNTGAKGWNGLEGQAADENSTIALAYTSGTTARPKGVEYSHR 230
Query: 102 GLFIITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPII 158
G ++ + ++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I
Sbjct: 231 GSYLAAMGNVIESGLNYHKGRCRYLWTLPMFHAMGWTFPWAITAVRGTHYCLRKIDYPYI 290
Query: 159 YSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVV 217
+ ++K+ +TH A V +L ++ + L PV++ T ASPP+A L + +L
Sbjct: 291 WHLLKNEHITHFNAAPTVNTLLCAAKEAERLPNPVRV-TVAASPPSAHLFEQMTNLNLHP 349
Query: 218 SHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQG---VRTIGLADMDVVHPE-TGM 273
H YG+TET G + W+TL D E+ + ARQG V ++ + + PE T +
Sbjct: 350 VHVYGMTETYGPITKGYHMPAWDTLPDKEKYQKMARQGHGFVTSLPVRIIKTDAPEGTIV 409
Query: 274 SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRS 333
V+ +G GEIVF GY KD +S + ++GD+ V H+DG ++I DR+
Sbjct: 410 DVQRNGCELGEIVFEGNICAKGYYKDPIATSKLF-EGGVLHSGDLAVWHADGAIQIMDRA 468
Query: 334 KDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEE 393
KD+IISGGENISS +ES+L +P I E +VA D WG+RP AFV++ + K
Sbjct: 469 KDIIISGGENISSVALESMLVTHPDILEAGVVAVPDSHWGERPKAFVTI--QPGKHIEGS 526
Query: 394 AIIEFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
II + + + + +M + V + ELPKT+TGK++K VLRE N
Sbjct: 527 EIIAWAKTASGISKFMVPREVEVVPELPKTSTGKVKKNVLREWAKGAN 574
>gi|255935213|ref|XP_002558633.1| Pc13g01890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583253|emb|CAP91258.1| Pc13g01890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 572
Score = 244 bits (622), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 161/463 (34%), Positives = 242/463 (52%), Gaps = 40/463 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + ++ + H +++++ VD + PL S P P+++ D AT
Sbjct: 116 RLKQEDIAYIFDHGDAEVIIVDEEYVPLLEHYRSQHPR-----IPIIVDTDTDATEGELT 170
Query: 65 GHPNFKWV--------------------QPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
G P + V Q E +AL YTSGTT+ PKGV HRG +
Sbjct: 171 G-PFDEAVLEGLRHDIDTGSRGWEGLESQAADEESTIALAYTSGTTARPKGVEFSHRGCY 229
Query: 105 IITVSSLIDWRIP---NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSV 161
+ T+ ++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+ +
Sbjct: 230 LATLGNVIETGLNYHRGRARYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPEIWRL 289
Query: 162 IKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHS 220
+K +TH A V +L ++ + L PV++ T ASPP +L + L H
Sbjct: 290 LKEEHITHFNAAPTVNTLLCNAKEAERLPEPVRV-TVAASPPTPLLFEQMTDLNLHPVHV 348
Query: 221 YGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVK 276
YG+TET G + +W+ L ++ + ARQG I V+ E T V+
Sbjct: 349 YGMTETYGPITKGYHLPEWDELPLKDKYQRMARQGHGFITSLPARVIKTEVPAGTITDVR 408
Query: 277 HDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDV 336
DGQ GEIVF GY KD E + ++GD+ V H DG ++I DR+KD+
Sbjct: 409 KDGQEIGEIVFVGNICARGYYKDPEATRKLFA-GGVLHSGDLAVWHPDGAIQILDRAKDI 467
Query: 337 IISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAII 396
IISGGENISS +ES+L M+P I E +VA D WG+RP AFV++K S + ++ +I
Sbjct: 468 IISGGENISSVALESMLVMHPDILEAGVVAVPDSHWGERPKAFVTVKEGKSLQGSD--LI 525
Query: 397 EFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
++ R + + +M + V + ELPKT+TGKI+K +LR+ V
Sbjct: 526 DWARNTSGISKFMIPREVEVVTELPKTSTGKIRKNILRDWVKG 568
>gi|345565058|gb|EGX48014.1| hypothetical protein AOL_s00081g341 [Arthrobotrys oligospora ATCC
24927]
Length = 581
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/372 (37%), Positives = 212/372 (56%), Gaps = 14/372 (3%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP---NQPVFLWTLPMF 129
Q + E +L YTSGTT+ PKGV + HRG+++ + ++I+ + + +LWTLP+F
Sbjct: 202 QAQDEDALFSLAYTSGTTARPKGVGYTHRGVYLAALGNVIESGLNYHRGRCKYLWTLPLF 261
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPL 189
H GW++ W + V GT+ CLRK+D +I+ +K G+TH A V +L + + L
Sbjct: 262 HATGWTFPWSVTMVRGTHYCLRKIDYGLIWKFMKEEGITHFAAAPTVNTLLCNDKAAVKL 321
Query: 190 DRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERAR 249
+ PV++ + + P A + + SL H YG+TET G + + W+ L D+ER
Sbjct: 322 ENPVRVTVAASPPTAHLFQQMTSLNLHPVHVYGMTETYGPISKGYYMPSWDDLPDSERFA 381
Query: 250 LKARQGVRTIGLADMDVVH------PETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
ARQG I + V+ T + VK DG+ GE+VF GY K+ E +
Sbjct: 382 KMARQGHGFITSLPLRVIRTGENVLEGTVIDVKKDGKEIGEVVFVGNICAKGYYKNPEET 441
Query: 304 SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVA 363
++GD+ V H DG ++I DR+KD+IISGGENISS +ES+L +P I E +
Sbjct: 442 KKLFA-GGVLHSGDLAVWHEDGAIQIMDRAKDIIISGGENISSVALESMLANHPDILEAS 500
Query: 364 LVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKT 421
+VA D WG+RP AFV++ + K T E IIE+ + + + +M + V I +ELPKT
Sbjct: 501 VVAVSDSHWGERPKAFVTI--QPGKSITGEEIIEWAKHVSDISKFMVPREVEIVNELPKT 558
Query: 422 ATGKIQKFVLRE 433
+TGK++K VLRE
Sbjct: 559 STGKVKKTVLRE 570
>gi|76802349|ref|YP_327357.1| long-chain-fatty-acid--CoA ligase [Natronomonas pharaonis DSM 2160]
gi|76558214|emb|CAI49802.1| acyl-CoA synthetase [Natronomonas pharaonis DSM 2160]
Length = 537
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 226/439 (51%), Gaps = 13/439 (2%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L+ ++K + DY+ + A P++ + D +
Sbjct: 89 RLLPDDLEYILNDCDAKAVIADYELAEKIEAVRDDIPTDIFITNDATETDGEWEDFDEVI 148
Query: 65 GHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFL 123
+ +PE E D + +NYTSGTT PKGV+ HR + + I I + V+L
Sbjct: 149 DGVGPDYDEPEMDEDDVITINYTSGTTGDPKGVMRTHRSETLHAYLTSIHQEISDDDVYL 208
Query: 124 WTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML--- 180
WTLPMFH NGW + + + +G ++C R VD I+ I+ V+++C A VLNML
Sbjct: 209 WTLPMFHVNGWGHIYSITGMGAKHVCTRGVDAETIFEAIQSEDVSYLCAAPTVLNMLLDY 268
Query: 181 -SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQ 238
S D V++ T+G++PP A + E G+ + H YG TET + + +
Sbjct: 269 YDSHDVETTGDSDVRVATAGSAPPEATIRTVEDEFGWYLKHVYGATETGPLITTSDSRRF 328
Query: 239 WNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLK 298
++ ++ +R +K QG+ +G D+ VV E G V DGQ+ GEIV R +M YL
Sbjct: 329 FDDDSE-DRFAVKKTQGLGFLG-TDVRVVD-EDGNDVPRDGQTIGEIVVRGNQVMDRYLG 385
Query: 299 DQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
E + D +++ GD+ V +G + I+DR KD+IISGGENISS E+E L+ +
Sbjct: 386 KPEATEEAFNDRVEGYYHMGDLATVDENGMMRIQDRKKDIIISGGENISSIELEDTLFEH 445
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVII 414
P +++VA++ WG+ P AFV + P TE+ + F R L Y + V
Sbjct: 446 PEVSDVAVIPAPSDEWGETPKAFVVPESGDPDDPAVTEDELTAFTRENLASYKMVRRVEF 505
Query: 415 EDELPKTATGKIQKFVLRE 433
+ELP TATGK+QK+ LRE
Sbjct: 506 VEELPTTATGKVQKYELRE 524
>gi|388854205|emb|CCF52124.1| related to AMP-binding protein [Ustilago hordei]
Length = 604
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/386 (38%), Positives = 209/386 (54%), Gaps = 26/386 (6%)
Query: 72 VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHE 131
+ P+ E P+AL YTSGTT PKGV+ HRG ++ V++ + I +LW LPMFH
Sbjct: 213 LAPQDEEQPIALCYTSGTTGRPKGVLTNHRGAYLAAVANAFEANITQDSRYLWVLPMFHA 272
Query: 132 NGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDR 191
GW++ W + A T+ +RKVD +I+ + HGVTH CGA V L++ PS K L R
Sbjct: 273 CGWTFPWAVTACLATHHTIRKVDNAVIWDALIDHGVTHYCGAPTVQIGLTNHPSAKKLPR 332
Query: 192 PVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLK 251
V + + ++P A +L + ESL H YGLTET G ++ +W L RAR+
Sbjct: 333 RVNVAVAASAPTANLLAKMESLNLHPVHVYGLTETYGPFTRRYFEPEWAKLDVDSRARMM 392
Query: 252 ARQGVRTIGLADMDVVHPETGMS-------VKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
ARQG + + VV ++ S V+ +G+ GEIV R M+ Y D +S
Sbjct: 393 ARQGHSYLTSDQVRVVRTDSSNSKDGDLIDVERNGKETGEIVIRGNMTMMAYYNDPLATS 452
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
+ WF+TGD+ V H G ++I DR KD+IISGGENISS VE L + + E +
Sbjct: 453 KAVLKG-WFHTGDLAVRHPGGEIQILDRGKDIIISGGENISSLMVEQELAAHRDVLECCV 511
Query: 365 VAQRDKFWGKRPCAFVSL----------KW--ELSKKPTEE--AIIE----FCRARLPHY 406
+A+ + WG+R AFV L W E+ K ++E A +E C+ R+ +
Sbjct: 512 IARPHEKWGERGQAFVVLTEQAKASRGCAWMEEVKKGGSKENKAFVEELKKHCKERISGF 571
Query: 407 MAHKSVIIEDELPKTATGKIQKFVLR 432
+ I D LPKT+TGK+QK VLR
Sbjct: 572 AVPEWFDIVDALPKTSTGKVQKNVLR 597
>gi|330835544|ref|YP_004410272.1| AMP-dependent synthetase and ligase [Metallosphaera cuprina Ar-4]
gi|329567683|gb|AEB95788.1| AMP-dependent synthetase and ligase [Metallosphaera cuprina Ar-4]
Length = 524
Score = 243 bits (620), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/445 (35%), Positives = 247/445 (55%), Gaps = 29/445 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVS--ATSSP 62
+L K ++ +++HSES+++ V+ +S LA + I K VLI ++ + A S
Sbjct: 85 KLSPKEIAYIINHSESEVVIVE-ESFLANLAEIR----KEIKAKLVLIENNENPIANESA 139
Query: 63 TVGHPNFKW-----------VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSL 111
FK + + E+ + + YTSGTT PKGV+ HRG F+ V
Sbjct: 140 KKDVTTFKEFLGLGSFSEIPIPVKEEYSLIGIYYTSGTTGLPKGVMLHHRGAFLNAVMEA 199
Query: 112 IDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHIC 171
++ ++ V+LWTL MFH W ++W AVG TN+ L KV+ +Y VI++ V+H+
Sbjct: 200 LEHQLDLNSVYLWTLNMFHAAAWGFAWATVAVGATNVYLDKVEPKTVYDVIRNERVSHMS 259
Query: 172 G--ALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTETAG 228
G AL + + + +R + ++ +G SPPA V LRT + LG + H YGLTET G
Sbjct: 260 GPPALFIDLVNYMKENDLKFNRKIHMIVAG-SPPAPVTLRTVQELGGYMCHVYGLTETYG 318
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
C WK +WN+L E+A+LK+RQGV +G +MDV+ P V DG++ GE+V R
Sbjct: 319 PHSICEWKEEWNSLPIGEQAKLKSRQGVPYVGF-EMDVLDPHDE-PVPRDGRTIGEVVMR 376
Query: 289 SGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
++ LGY KD + + R WF++GD VVH DGY+E+ DR KD+I + +SS
Sbjct: 377 GNNVALGYYKDPKRTEESFR-GGWFHSGDAAVVHPDGYVEVIDRFKDLIFTPEGRVSSVL 435
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMA 408
VE L P + VA+ ++ G++ A + + + P+E +I+FC++ L +
Sbjct: 436 VEKTLMEIPGVKRVAVYGIPEE-KGEKVVARIETQEGVKLTPSE--VIDFCKSILAEFEC 492
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
K V+ D +P T+TGK+QK++LR+
Sbjct: 493 PK-VVEFDRIPMTSTGKVQKYLLRK 516
>gi|322370803|ref|ZP_08045359.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
gi|320549761|gb|EFW91419.1| AMP-dependent synthetase and ligase [Haladaptatus paucihalophilus
DX253]
Length = 532
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 142/369 (38%), Positives = 206/369 (55%), Gaps = 22/369 (5%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWS 135
SE D ++NYTSGTT PKGVV HR + I + +LWTLPMFH NGW
Sbjct: 162 SEDDDASINYTSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDTYLWTLPMFHCNGWG 221
Query: 136 YSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPL-----D 190
+++ + GGT++CLRK I++H V+ +CGA VLN + + P D
Sbjct: 222 HTYAITGTGGTHVCLRKFTPERTLGKIRNHDVSFMCGAPTVLNRVIAYKENNPDVETTGD 281
Query: 191 RPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERAR 249
R ++I T+G++P A + E + + + H YGLTETA + + + T R R
Sbjct: 282 RELRIATAGSAPATATIETVEDDISWRIIHIYGLTETAPIITTSNSPRRLAT-----RGR 336
Query: 250 -LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMR 308
LK +QG +G D+ VVH + G V DGQ+ GE+V R +M YL E +
Sbjct: 337 SLKVKQGSEVLG-TDVRVVH-DDGTDVPADGQTMGEVVVRGNQVMDRYLNKPEATEEAFN 394
Query: 309 D--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVA 366
D + +F+TGD+ + DG + I+DR KD+IISGGEN+SS EVE VLY +P I + A++
Sbjct: 395 DRISGYFHTGDLATIDEDGMISIQDRKKDIIISGGENVSSIEVEDVLYDHPEIAKAAVIP 454
Query: 367 QRDKFWGKRPCAFVSLK--WELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATG 424
WG+ A V K ELS E +FCR R+ Y + ++++++LP+TATG
Sbjct: 455 TPSDEWGELVTAVVVPKPGVELSDADVE----DFCRDRMAGYKIPRKILVQEDLPETATG 510
Query: 425 KIQKFVLRE 433
K+QK+ LR+
Sbjct: 511 KVQKYQLRK 519
>gi|448315531|ref|ZP_21505179.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
gi|445611704|gb|ELY65451.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
Length = 547
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 151/452 (33%), Positives = 233/452 (51%), Gaps = 29/452 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + + +L + ++ DY+ + P+ T + V D V S
Sbjct: 89 RLTPEDFAYMLEDAGVDAVYADYEYADRIEEIREAVPTETFITNDV---DAVEGGRSSAD 145
Query: 65 GH----PNFKWV---------QPESEWDPM-ALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
G +F+ V +PE D + +NYTSGTT PKGV HRG I
Sbjct: 146 GSDGAWEDFERVLEDASPEYDRPEMHEDEIITINYTSGTTGDPKGVCRTHRGETIHAYLV 205
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+ + + V+LWTLPMFH NGW + + + +G ++C R VD + I+ V+++
Sbjct: 206 AVHQNLTDDDVYLWTLPMFHVNGWGHIYAVTGMGAKHVCTRGVDAEWLLETIREEDVSYL 265
Query: 171 CGALVVLNMLSSSPSTKPLD----RPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTE 225
CGA VLNML ++ V+I T+G++PP A L E G+ + H YG TE
Sbjct: 266 CGAPTVLNMLIDYYGENAVETTGANDVRIATAGSAPPEATLRTVEDEFGWYLKHVYGATE 325
Query: 226 TAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEI 285
T + + + + +DT R +K RQG+ +G ++ VV E G V DG++ GE+
Sbjct: 326 TGPLITTSDARRHFEDDSDT-RFAVKKRQGLGFMG-TEVRVVD-EDGEDVPRDGETLGEV 382
Query: 286 VFRSGSIMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGEN 343
V R +M Y E + D +F+TGD+ + +G + I+DR KD+IISGGEN
Sbjct: 383 VVRGNQVMERYWNKPEETEEAFSDRVEGYFHTGDLATIDENGMIAIQDRKKDIIISGGEN 442
Query: 344 ISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRA 401
ISS E+E VL+ +P +++VA++ + WG+ P AFV + +P +E+ ++ F R
Sbjct: 443 ISSIELEDVLFDHPEVSDVAVIPSPSERWGETPKAFVVPESGEPDEPGVSEDDLVAFTRE 502
Query: 402 RLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
RL +Y + + D LP TATGK+QK+ LRE
Sbjct: 503 RLANYKTVQCIEFVDVLPTTATGKVQKYELRE 534
>gi|322707233|gb|EFY98812.1| AMP-binding domain protein [Metarhizium anisopliae ARSEF 23]
Length = 567
Score = 242 bits (618), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 238/457 (52%), Gaps = 38/457 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL ++ + H++ + VD + L P+ P+++ D AT P+
Sbjct: 113 RLKEDDIAYIFEHADVDCIIVDKEFEGLLGVFTKKHPN-----VPLIVDLDTDATEGPSC 167
Query: 65 GHPN---------------FKWVQPES----EWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G N W +S E D +A+ +TSGTTS PKGVV+ HRG ++
Sbjct: 168 GQFNEAILEGLAYDRELGGHSWAGLQSKATNEDDMLAIPFTSGTTSRPKGVVYTHRGAYL 227
Query: 106 ITVSSLIDWRIPNQP--VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
+ ++I+ + NQ +LWTLPMFH GW++ W + AV G N+CLRK+D P+I+ ++K
Sbjct: 228 AAMGNIIESGL-NQGHCRYLWTLPMFHAIGWTFPWSVVAVRGLNVCLRKIDYPLIWKLLK 286
Query: 164 HHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLR-TESLGFVVSHSYG 222
G+TH A V +L ++ L PV++ T ASPP+A L +L + H YG
Sbjct: 287 EEGITHFNAAPTVNTLLVAAKEAVKLPNPVQV-TVAASPPSAHLFELMTNLNLMPVHVYG 345
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKHD 278
+TET G + C +W+ L ++ ARQG + + ++ P+ + V +
Sbjct: 346 MTETYGPITKCYHLPEWDNLPPQQKYAKMARQGHGFVTSLPIRIIKPDQPEGVLIDVAKN 405
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
GQ GEIVF Y KD E S ++GD+ V H DG +I DR+KD+II
Sbjct: 406 GQEIGEIVFIGNICAKEYYKDAEASRKLFA-GGVLHSGDLAVWHPDGSAQILDRAKDIII 464
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ES+L +P I E +VA + WG+ P A+V++K K E +I +
Sbjct: 465 SGGENISSVALESMLVQHPDILEAGVVAVPNDHWGEVPKAYVTVKE--GKNIRGEDVISW 522
Query: 399 CR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + +M K V + ELPKT+TGKI+K LRE
Sbjct: 523 AKHQSNISKFMVPKEVEVVKELPKTSTGKIKKNDLRE 559
>gi|448419937|ref|ZP_21580747.1| acyl-CoA synthetase [Halosarcina pallida JCM 14848]
gi|445674105|gb|ELZ26650.1| acyl-CoA synthetase [Halosarcina pallida JCM 14848]
Length = 537
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/438 (35%), Positives = 231/438 (52%), Gaps = 29/438 (6%)
Query: 14 LLHHSESKLLFVDYQSSPLALAALSLFPSNTIL---PKPV----LIHDDVSATSSPTVGH 66
+L+ + K ++ D+ + A P+ T + P+ V L D++ A S+
Sbjct: 98 ILNDAGVKAVYADHAYAGKIEAVREDVPTETFITNDPEKVEGEWLSFDELVAEST----- 152
Query: 67 PNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWT 125
++ +PE +E D + +NYTSGTT PKGV HR + + I + V+LWT
Sbjct: 153 ---EYDRPEMAEEDLITINYTSGTTGDPKGVCRTHRTETLHAYLVSVHQNISDDDVYLWT 209
Query: 126 LPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPS 185
LPMFH NGW + + + G ++C R VD I+ I V+++C A VLNML
Sbjct: 210 LPMFHVNGWGHLYAVTGAGAKHVCTRGVDAEWIFDAIGEEDVSYLCAAPTVLNMLMDYYD 269
Query: 186 TK-----PLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQW 239
+ + PV+ T+GA+PP A + E G+ + H YG TET + + + +
Sbjct: 270 RQDGVETAGEAPVRAATAGAAPPEATIRTVEDEFGWYLMHVYGATETGPLITTSDARRFF 329
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKD 299
+D +R +K +QG+ +G D+ VV E G V DGQ+ GEIV R +M Y
Sbjct: 330 EDDSD-DRFAVKKQQGIGYLG-TDVRVVD-EDGEDVTPDGQTVGEIVVRGNQVMDRYWNK 386
Query: 300 QEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
E + D +++ GD+ VV +G++ I+DR KD+IISGGENISS E+E L+ +
Sbjct: 387 PEETEEAFTDRLEGYYHMGDLAVVDENGFVTIQDRKKDIIISGGENISSIELEDTLFDHE 446
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIE 415
A+ +VA++ + WG+ P AFV + P T E +IEF R R+ Y K +
Sbjct: 447 AVGDVAVIPMPSEEWGESPKAFVVPASGDAANPGVTAEELIEFTRERIATYKVPKEIAFV 506
Query: 416 DELPKTATGKIQKFVLRE 433
ELPKTATGKIQK+ LRE
Sbjct: 507 AELPKTATGKIQKYELRE 524
>gi|396493939|ref|XP_003844192.1| similar to acyl CoA synthetase [Leptosphaeria maculans JN3]
gi|312220772|emb|CBY00713.1| similar to acyl CoA synthetase [Leptosphaeria maculans JN3]
Length = 589
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 157/459 (34%), Positives = 241/459 (52%), Gaps = 37/459 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL H ++ + H++ ++ D + L LA N P+LI D T
Sbjct: 129 RLKHDDINYIFQHADVDMIIADAEFEGL-LADFKRDKPNV----PILIDTDTDVTEGELS 183
Query: 65 G---------------HPNFKWVQPES----EWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G W + ES E AL YTSGTT+ PKGV HRG+++
Sbjct: 184 GPFDDAVLEGLKYDIEKGGKGWTELESQAPDEEAVFALAYTSGTTARPKGVELTHRGVYL 243
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
++++I+ + + +LWTLPMFH GW++ W + V GT+ CLRK+D P I+ ++
Sbjct: 244 AAMANVIESGLNYHEGRAKYLWTLPMFHATGWTFPWSVTMVRGTHYCLRKIDYPEIWRLL 303
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSY 221
K G+TH A V +L ++ + L +PV++ T ASPP+A L S L H Y
Sbjct: 304 KEEGITHFNAAPTVNTLLCAAKEAERLPQPVRV-TVAASPPSAFLFEQMSNLNLHPVHVY 362
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKH 277
GLTET G +W+T+ + E+ ARQG I + V+ E + V
Sbjct: 363 GLTETYGPTTKGYHMPEWDTIPEKEKYERMARQGHGFITGLPVRVIKTEQPEGVLIDVAK 422
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
DG+ GE++F GY KD E ++ + ++GD+ V H D ++I DR+KD+I
Sbjct: 423 DGKEIGEVIFEGNICAKGYYKDAE-ATRKLWAGGVLHSGDLAVWHPDNSIKILDRAKDII 481
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK-WELSKKPTEEAII 396
ISGGENISS +E++L +PAI EV + A D WG+RP A+V++K S + + +I
Sbjct: 482 ISGGENISSVALEAMLSTHPAILEVGVCAVPDSHWGERPKAYVTVKDGYASNEEIGKEVI 541
Query: 397 EFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
++ + + + +M + V++ ELPKT+TGKI+K VLR+
Sbjct: 542 QWAKENSSISRFMVPREVVVVKELPKTSTGKIKKNVLRQ 580
>gi|242784714|ref|XP_002480446.1| AMP-binding domain protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218720593|gb|EED20012.1| AMP-binding domain protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 576
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 172/464 (37%), Positives = 247/464 (53%), Gaps = 44/464 (9%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPK-PVLIHDDVSATS 60
V RL + VS + HS+++L+ VD + L L LF S P P LI D AT
Sbjct: 116 VNYRLKPEDVSYIFEHSDAELIIVDAEYVSL----LDLFKSEH--PNIPFLIDTDTDATE 169
Query: 61 SPTVGHPNFK---------------W----VQPESEWDPMALNYTSGTTSSPKGVVHCHR 101
G + W Q E +AL YTSGTT+ PKGV HR
Sbjct: 170 GELSGPFDAAILEGLDYDKDTGAKGWDALETQTTDENATIALAYTSGTTARPKGVEFSHR 229
Query: 102 GLFIITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPII 158
G ++ ++++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I
Sbjct: 230 GSYLAAMANVIESGLNYHKGRCGYLWTLPMFHAIGWTFPWAVTAVRGTHYCLRKIDYPYI 289
Query: 159 YSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVV 217
+ ++K+ VTH A V +L ++ + L PV++ T ASPP A L + +L
Sbjct: 290 WYLLKNENVTHFNAAPTVNTLLCAAKEAERLPEPVRV-TVAASPPTAHLFEQMTNLNLHP 348
Query: 218 SHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIG-----LADMDVVHPE-T 271
H YG+TET G + W+TL D E+ + ARQG I + MDV PE T
Sbjct: 349 VHVYGMTETYGPITKGYHMPVWDTLPDKEKYQKMARQGHGFITSLPARVIKMDV--PEGT 406
Query: 272 GMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKD 331
+ V+ +G GEIVF GY KD +S ++GD+ V H DG ++I D
Sbjct: 407 IVDVQRNGLELGEIVFEGNICAKGYYKDPVATSKLFA-GGVLHSGDLAVWHEDGAIQIMD 465
Query: 332 RSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT 391
R+KD+IISGGENISS +ES+L +P I E +VA D WG+RP AFV+++ + K +
Sbjct: 466 RAKDIIISGGENISSVALESMLANHPDILEAGVVAVPDSHWGERPKAFVTVQAGKNVKGS 525
Query: 392 EEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ II + + + + +M + V + ELPKT+TGK++K VLRE
Sbjct: 526 D--IIAWAKTASGISKFMVPREVEVVPELPKTSTGKVKKNVLRE 567
>gi|448667493|ref|ZP_21685993.1| medium-chain acyl-CoA ligase [Haloarcula amylolytica JCM 13557]
gi|445770061|gb|EMA21129.1| medium-chain acyl-CoA ligase [Haloarcula amylolytica JCM 13557]
Length = 533
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 155/441 (35%), Positives = 224/441 (50%), Gaps = 21/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP-KPVLIHDDVSATSSPT 63
RLD ++ +L+ E+ + DY + P+ T + +P I + A S
Sbjct: 89 RLDPAKIEYILNDCEAATVIADYDFAEKVQPVRDDIPAETFIGYEPDRIDGEWEAYSGIL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
G P + +P+ +E D ++NYTSGTT PKGVV HR + I + +
Sbjct: 149 DGQPTAEPDRPDMAEDDDASINYTSGTTGDPKGVVRTHRTESWHALVLNQHMEIRDDDTY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW +++ + GGT++C R D + ++ + V+ +CGA VLN L
Sbjct: 209 LWTLPMFHCNGWGHTYAITGTGGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQ 268
Query: 181 ----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
DR V+I T+G++P A + R E G+ + H YGLTETA + +
Sbjct: 269 HYRAHDGDVVTQGDREVRIATAGSAPATATIERVEDEFGWRIIHIYGLTETAPIITTSNS 328
Query: 236 KSQWNTLADTERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+ ER R LK QG + + D+ VV E G V DG + GEIV + +M
Sbjct: 329 PRRI-----AERGRELKVTQGSQVL-CTDIRVVD-EDGNDVPRDGTTIGEIVVQGNQVMD 381
Query: 295 GYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
YL E + D +F+TGD+ DG ++I DR KD+IISGGENISS E+E
Sbjct: 382 RYLNKPEITEEAFNDRVEGYFHTGDLATWDEDGMVQIMDRRKDIIISGGENISSIELEDE 441
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P + + A++ + WG+ P A V TE+ I+EF R R+ Y +
Sbjct: 442 LYDHPDVLKAAVIPAPSEDWGETPMAIVVPT--ADSDATEQDILEFLRERVASYKVPAGI 499
Query: 413 IIEDELPKTATGKIQKFVLRE 433
D LP+TATGKIQK+ LRE
Sbjct: 500 DFRDSLPETATGKIQKYELRE 520
>gi|393240316|gb|EJD47843.1| acetyl-CoA synthetase-like protein [Auricularia delicata TFB-10046
SS5]
Length = 565
Score = 241 bits (616), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 153/454 (33%), Positives = 231/454 (50%), Gaps = 42/454 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL V +L HS +K + VD + + L + I PV++ D T P
Sbjct: 118 RLKKHEVDYILEHSGAKFILVDSEWA-------HLVEGHNI---PVIVSHD---TGRPGC 164
Query: 65 GHPNF-----------KWVQPESEWDPMA---LNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ F W E E D A L YTSGTT PKGV+ RG ++ +++
Sbjct: 165 PYEAFLEHGRRVSGERGWTGLEIETDENAAATLCYTSGTTGRPKGVIGTLRGSYLAAIAN 224
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+ R+ + +LW LPMFH GW++ W T + LR VD +I+ +++ GVTH
Sbjct: 225 AYESRLTRESTYLWVLPMFHAAGWTFPWANVFAFDTQVTLRTVDNKLIWKNLRN-GVTHY 283
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
CGA V L ++P K L +P + +G++P AA++ E L H YGLT+T G +
Sbjct: 284 CGAPTVQIGLINAPEAKRLAKPATAIIAGSAPTAALIAGLERLNIATVHVYGLTQTYGPM 343
Query: 231 VSCAWKSQWNTLADTERARLKARQG--------VRTIGLADMDVVHPETGMSVKHDGQSQ 282
++ L+ RA++ ARQG VR + + D + + + DG++
Sbjct: 344 TRNYPQAGLEALSVDARAKILARQGHGFATADEVRVVAQREDDAI-----VDIPSDGKAV 398
Query: 283 GEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGE 342
GE+V R +M Y +D + + R +F +GD+ V H DG + I+DRSKD+IISGGE
Sbjct: 399 GEVVMRGNIVMREYYRDAKATREAFRGG-YFRSGDLAVRHPDGSIAIQDRSKDIIISGGE 457
Query: 343 NISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR 402
N SS +E L +P + EV++VA+ WG+RP AF L+ +S E + F + R
Sbjct: 458 NASSLAIEQELAHHPEVLEVSVVARPHSRWGERPMAFAVLRPGMSGDGFEARLKAFAKER 517
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLREIVN 436
LP + + V + D LPKT+TGKI K LR++
Sbjct: 518 LPGFACPEWVRVVDALPKTSTGKIVKVELRKVAK 551
>gi|448304481|ref|ZP_21494419.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
gi|445590914|gb|ELY45126.1| AMP-dependent synthetase and ligase [Natronorubrum sulfidifaciens
JCM 14089]
Length = 537
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 227/436 (52%), Gaps = 15/436 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L ++ ++ DY+ + A P+ T + V + + +
Sbjct: 89 RLTPDDFAYILSDADVDAIYADYEYAENIEAVRDDVPTETFITNDVDAVEGEWESFDAVL 148
Query: 65 GHPNFKWVQPESEWDPM-ALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFL 123
++ +PE + D + +NYTSGTT PKGV HRG I ++ I + V+L
Sbjct: 149 EDAGTEYDRPEMDEDEIITINYTSGTTGDPKGVCRTHRGETIHAYLTVAHQEISDDDVYL 208
Query: 124 WTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML--- 180
WTLPMFH NGW + + + +G T++C R +D I+ ++ V+++CGA VLNML
Sbjct: 209 WTLPMFHANGWGHIFAVTGIGATHVCTRGIDAAEIFETVREEHVSYMCGAPTVLNMLVDY 268
Query: 181 --SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKS 237
P T D PV++ T+G++PP A + E G+ + H YG TET + +
Sbjct: 269 YIEHEPETTG-DAPVRLATAGSAPPEATIRTVEDEFGWYLKHVYGATETGPLITTSDAGR 327
Query: 238 QWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY- 296
+ +D +R R+K RQG+ +G ++ VV E G + D ++ GE+V R IM Y
Sbjct: 328 LFEADSD-DRFRIKKRQGLAFLG-TEIRVVD-EDGNDIPRDDETLGEVVVRGNQIMEKYW 384
Query: 297 -LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
D + R +++TGD+ + G + I+DR KD+IISGGENISS E+E L+
Sbjct: 385 GKPDATEEAFTDRIEGYYHTGDLATIDEHGMIAIQDRKKDIIISGGENISSIELEDTLFD 444
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVI 413
+P +++VA++ + WG+ P AFV +P +EE ++ F R L Y +
Sbjct: 445 HPEVSDVAVIPAPSEKWGETPKAFVVPTSGDPDEPGVSEEDLVAFTRDNLAGYKTVHRIE 504
Query: 414 IEDELPKTATGKIQKF 429
ELP TATGK+QK+
Sbjct: 505 FVAELPTTATGKVQKY 520
>gi|359494577|ref|XP_003634807.1| PREDICTED: LOW QUALITY PROTEIN: medium-chain-fatty-acid--CoA
ligase-like [Vitis vinifera]
Length = 379
Score = 241 bits (615), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 214/401 (53%), Gaps = 62/401 (15%)
Query: 7 DHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTVGH 66
D VS LL HS+++++FVD++ I D+
Sbjct: 23 DSAMVSTLLKHSKAEMVFVDWK-----------------------IDFDI---------- 49
Query: 67 PNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTL 126
+W P + DP+ +NY SG TS +GV++ HRG ++ +++ ++ + V LW
Sbjct: 50 ---RW--PNDKXDPITMNYLSGITSDERGVIYSHRGAYLNSLAVILLNEMGPMSVNLWAA 104
Query: 127 PMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPST 186
MFH NGW +WG+AA G N+ LR V V I+ I H TH+ +LNM+ ++
Sbjct: 105 SMFHCNGWRLTWGVAAXGCINVFLRNVTVKGIFESIAQHKATHMGATPTILNMIINT--- 161
Query: 187 KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTE 246
P +VL + + LGF +SHSYGL T G C WK + + L +
Sbjct: 162 ----------------PVSVLFKMKELGFGISHSYGLIVTYGPGSVCTWKPEXDLLPPKK 205
Query: 247 RARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLC 306
+A++KA QG+ +G+ ++D+ T SV D ++ GE++FR ++M GYLK +L
Sbjct: 206 QAKIKAWQGLHHLGMEEIDIKDLITMKSVPPDAKAVGEVMFRDNTVMNGYLKKSTXEAL- 264
Query: 307 MRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVA 366
+N WF + D+GV H DGY+E+KD SKD+IIS GENIS+ +V+++ + +P I E +V
Sbjct: 265 --ENGWFRSKDLGVKHHDGYIELKDHSKDIIISRGENISTIKVDALFFSHPTIFEAVVVG 322
Query: 367 QRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYM 407
+ D + + PCAFV K + E II+F R +LPHYM
Sbjct: 323 KPDDYXVETPCAFVKSKEGCNANANE--IIKFFRDKLPHYM 361
>gi|448633792|ref|ZP_21674291.1| medium-chain acyl-CoA ligase [Haloarcula vallismortis ATCC 29715]
gi|445750483|gb|EMA01921.1| medium-chain acyl-CoA ligase [Haloarcula vallismortis ATCC 29715]
Length = 539
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 150/440 (34%), Positives = 226/440 (51%), Gaps = 31/440 (7%)
Query: 14 LLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS------SPTVGHP 67
+L +E ++ DY+ A + P +P + + +D A +
Sbjct: 98 ILSDAEVDAVYADYEY------AEKIEPIRDDVPTEIFVTNDTDAVDGDWESFDEIIEAA 151
Query: 68 NFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTL 126
+ +PE E D + +NYTSGTT PKGVV HR + + + + V+LWTL
Sbjct: 152 GTDYERPEMDEDDDITINYTSGTTGDPKGVVRTHRTETLHAYLVALHQELSDDDVYLWTL 211
Query: 127 PMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSS--- 183
PMFH NGW + + + +G ++C R VD I+ ++ V+++CGA VLN+LS
Sbjct: 212 PMFHVNGWGHIFSVTGMGAKHVCTRGVDAKGIFDAVRTEDVSYLCGAPTVLNILSDRYKD 271
Query: 184 -----PSTKPLDRPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCAWKS 237
+T D V+I T+G++PP AV+ E G+ + H YG TET V + +
Sbjct: 272 HNGEIETTGAND--VRIATAGSAPPEAVIRTVEDDFGWYLKHVYGATETGPLVTTSDARR 329
Query: 238 QWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYL 297
+ +D R +K RQG+ +G D+ VV E G V HD ++ GE+V R +M Y
Sbjct: 330 FFEDGSDA-RFSVKKRQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYW 386
Query: 298 KDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
E + D +++ GD+ V DG + I+DR KD+IISGGENISS E+E LY
Sbjct: 387 NKPEQTEEAFSDRVEGYYHMGDLATVDEDGMVAIRDRKKDIIISGGENISSIELEDTLYE 446
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVI 413
+ A+++VA++ WG+ P AFV + P T E + F R +L Y + V
Sbjct: 447 HDAVSDVAVIPAPSDEWGETPKAFVVPNSGDTDDPGVTAEDLRNFTREQLATYKVVRRVE 506
Query: 414 IEDELPKTATGKIQKFVLRE 433
+ELP TATGK+QK+ LRE
Sbjct: 507 FVEELPTTATGKVQKYELRE 526
>gi|336366059|gb|EGN94407.1| hypothetical protein SERLA73DRAFT_188276 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378731|gb|EGO19888.1| hypothetical protein SERLADRAFT_478339 [Serpula lacrymans var.
lacrymans S7.9]
Length = 590
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 157/477 (32%), Positives = 233/477 (48%), Gaps = 61/477 (12%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL V+ +L HS SKLL +D L L P ++++D P
Sbjct: 124 RLTPPEVAYILEHSGSKLLLIDRGLMQLVQG----------LKIPFIVNNDTGRIGDP-- 171
Query: 65 GHPNF-----------KWVQPESEWDPMA---LNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ +F W + E D A L YTSGTT PKGV+ RG ++ +++
Sbjct: 172 -YEDFLSAGRRFSAEKGWAGLDVELDEGAGAVLCYTSGTTGRPKGVLTTLRGSYLAAIAN 230
Query: 111 LIDWRIPNQPVFLW---------------------TLPMFHENGWSYSWGMAAVGGTNIC 149
+++ +I +LW LPMFH GW++ W T I
Sbjct: 231 VVEGQISKDSTYLWWASSLAYPHPLSEGNVLLNNRILPMFHAAGWTFPWANVFAFATQIT 290
Query: 150 LRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLR 209
+R VD I+ + GVTH CGA V + ++P+ +PL R + + +GA+P A ++
Sbjct: 291 MRTVDYSQIWKHFLNSGVTHYCGAPTVQIGIVNNPAARPLPRSISAIIAGAAPTAHLIGE 350
Query: 210 TESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP 269
E G H YGLT T G C + W L+ ERA+L ARQG ++ VV+P
Sbjct: 351 LEKKGIQPVHVYGLTYTYGPFTRCYDQPSWALLSLEERAKLMARQGQSFATAQEVRVVYP 410
Query: 270 ------ETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHS 323
+ + V DG++ GE+ R +M Y +D E + R +F++GD+ V+H
Sbjct: 411 PKSEDDQEVVDVPKDGKTVGEVATRGNIVMKEYFRDPEATRKAFR-GGYFHSGDLAVMHP 469
Query: 324 DGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK 383
DG + I DRSKD+IISGGEN SS +E L +P + EV++VA+ WG+RP AFV+L+
Sbjct: 470 DGVIAIMDRSKDIIISGGENASSLAIEQELASHPHVLEVSVVARSHVKWGERPMAFVTLR 529
Query: 384 ------WELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREI 434
W+ + + + R RLP + + V + +ELPKT+TGKI K LR I
Sbjct: 530 QEHVSAWKGKHNVFGDELKRYARTRLPGFACPEWVEVVEELPKTSTGKILKTNLRTI 586
>gi|448495679|ref|ZP_21610124.1| AMP-dependent synthetase and ligase [Halorubrum californiensis DSM
19288]
gi|445687772|gb|ELZ40047.1| AMP-dependent synthetase and ligase [Halorubrum californiensis DSM
19288]
Length = 538
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 155/442 (35%), Positives = 226/442 (51%), Gaps = 18/442 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPV-LIHDDVSATSSPT 63
RL S +L + ++ D + +P A P+ T L + D + +
Sbjct: 89 RLTPGDFSYMLSDAGVDAIYADAEYAPNVEAIRDEVPTETFLTNDADAVEGDWESFDAAL 148
Query: 64 VGHPNFKWVQPESEWDP-MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
+ +PE + D + +NYTSGTT PKGV HR + I I + V+
Sbjct: 149 DDADPDAYERPEMDEDEVITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW + + + G ++C R VDV + I+ V++ C A VLNML
Sbjct: 209 LWTLPMFHVNGWGHIYAITGAGARHVCTRGVDVAETFDRIRSEDVSYFCAAPTVLNMLGD 268
Query: 181 --SSSPSTKPLDRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFVVSCAWK 236
+ D V++ T+GA+PP +RT E G+ + H YG TET + + K
Sbjct: 269 HYAEHGGETTGDNDVRVATAGAAPPETT-IRTVEEEFGWDLKHVYGATETGPLITTSDAK 327
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
++ +AD +R +K QG+ +G D+ VV E G V DG++ GEIV R +M Y
Sbjct: 328 RHFDEMAD-DRFAVKKTQGIGYLG-TDVRVV-GEDGEDVAADGETIGEIVVRGNQVMDRY 384
Query: 297 LKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
E + + R +++ GD+ VV DG++ I+DR KD+IISGGENISS E+E L+
Sbjct: 385 WNKPEATEEAFSERLEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLF 444
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFV---SLKWELSKKPTEEAIIEFCRARLPHYMAHKS 411
+ A+ E A++ D+ WG+ P AFV S + + TEE + F R R+ Y
Sbjct: 445 EHDAVAEAAVIPAPDERWGETPKAFVVPASGDPDDAGATTEE-LKTFVRERVADYKTPGE 503
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
V ELP TATGKIQK+ LRE
Sbjct: 504 VEFVAELPTTATGKIQKYELRE 525
>gi|145255025|ref|XP_001398839.1| AMP-binding domain protein [Aspergillus niger CBS 513.88]
gi|134084426|emb|CAK97418.1| unnamed protein product [Aspergillus niger]
Length = 589
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 236/457 (51%), Gaps = 36/457 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT----S 60
RL ++ + HSE++++ VD + PL P P+++ D S
Sbjct: 134 RLKEDDIAYIFTHSEAEVIIVDKEFLPLLRVYREAKPET-----PIIVDTDTDTAEGQLS 188
Query: 61 SP-------------TVGHPNFKWVQPE--SEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
P G ++ ++ + SE D +AL YTSGTTS PKGV + +RG ++
Sbjct: 189 GPFDEAVLEGLKYDIATGDKGWEGLESQAGSEDDVIALAYTSGTTSRPKGVEYTNRGAYL 248
Query: 106 ITVSSLIDWRIP---NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
+ ++++ + + +LW LPMFH GW++ W + A GT+ CLRKVD I+ +
Sbjct: 249 AALGNVVESGLNVFNGRCRYLWILPMFHAVGWTFPWAVTAARGTHYCLRKVDYGQIWKLF 308
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
K G+TH A V +L + P + L PV + +G+ P + + SL H YG
Sbjct: 309 KTEGITHFNAAPTVNTLLCNHPDAERLSTPVIVQVAGSPPTPHLFEQMTSLNLRPVHVYG 368
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVH---PE-TGMSVKHD 278
+TET G C W+ L E+ R ARQG + V+ PE T + VK D
Sbjct: 369 MTETYGPTTRCYMLPAWDQLPRDEKFRRMARQGHGFLTSLPTRVIKTDVPEGTIIDVKRD 428
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
G+ GEI F GY KD E + ++GD+ V H DG ++I DR+KD+II
Sbjct: 429 GKEIGEIAFVGNICAQGYYKDAEATRKLFA-GGVLHSGDLAVWHPDGAIQILDRAKDIII 487
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ES+L +P I EV +VA D WG+RP AFV+ K + E +I++
Sbjct: 488 SGGENISSVALESMLVTHPDILEVGVVAVPDTHWGERPKAFVTTKQGRHLEGKE--VIDW 545
Query: 399 CR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
R +++ +M + V + ELPKT+TGKI+K VLR+
Sbjct: 546 ARNQSQISKFMLPREVEVVAELPKTSTGKIRKNVLRD 582
>gi|448446178|ref|ZP_21590664.1| AMP-dependent synthetase and ligase [Halorubrum saccharovorum DSM
1137]
gi|445684370|gb|ELZ36748.1| AMP-dependent synthetase and ligase [Halorubrum saccharovorum DSM
1137]
Length = 538
Score = 240 bits (613), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 225/441 (51%), Gaps = 16/441 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPV-LIHDDVSATSSPT 63
RL S +L + ++ D + + A P+ T L + D +
Sbjct: 89 RLTPDDFSYMLSDAGVDAIYADAEYAANVEAVRDEVPTETFLTNDTDAVGGDWESIDDAL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
+ +PE E D + +NYTSGTT PKGV HR + I I + V+
Sbjct: 149 ADADPDGYERPEMDEDDVITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW + + + +G ++C R VDV + I+ V++ C A VLNML
Sbjct: 209 LWTLPMFHVNGWGHIYAITGMGARHVCTRGVDVAETFDRIRTEDVSYFCAAPTVLNMLGD 268
Query: 181 --SSSPSTKPLDRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFVVSCAWK 236
+ T D V++ T+GA+PP A +RT E G+ + H YG TET V + K
Sbjct: 269 HYAEHGGTTTGDNDVRVATAGAAPPEAT-IRTVEEEFGWGLKHVYGATETGPLVTTSDAK 327
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
+ +D +R +K QG+ +G D+ VV E G V DG++ GEIV R +M Y
Sbjct: 328 RHYEADSD-DRFAVKKTQGIGYLG-TDVRVVD-ENGEDVAADGETIGEIVVRGNQVMDRY 384
Query: 297 LKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
E + + R +++ GD+ VV DG++ I+DR KD+IISGGENISS E+E L+
Sbjct: 385 WNKPEATEEAFSERLEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDALF 444
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSV 412
+ +++VA++ D+ WG+ P AFV + P T E + F R R+ Y V
Sbjct: 445 EHDIVSDVAVIPAPDERWGETPKAFVVPESGDPDDPGATPEELKAFVRERVADYKTPGEV 504
Query: 413 IIEDELPKTATGKIQKFVLRE 433
++LP TATGKIQK+ LRE
Sbjct: 505 EFVEKLPTTATGKIQKYELRE 525
>gi|448689091|ref|ZP_21694828.1| medium-chain acyl-CoA ligase [Haloarcula japonica DSM 6131]
gi|445778961|gb|EMA29903.1| medium-chain acyl-CoA ligase [Haloarcula japonica DSM 6131]
Length = 533
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 225/441 (51%), Gaps = 21/441 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP-KPVLIHDDVSATSSPT 63
RLD ++ +L+ E+ + DY + P+ T + +P I + A S
Sbjct: 89 RLDPAKIEYILNDCEAATVIADYDFAEKVQPVRDDIPAETFIGYEPDRIDGEWEAYSGIL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
G P + +P+ +E D ++NYTSGTT PKGVV HR + I + +
Sbjct: 149 DGQPTAEPDRPDMTEDDDASINYTSGTTGDPKGVVRTHRTESWHALVLNQHMEIRDDDTY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW +++ + GGT++C R D + ++ + V+ +CGA VLN L
Sbjct: 209 LWTLPMFHCNGWGHTYAITGTGGTHVCQRTFDAADTFRRVREYDVSFMCGAPTVLNKLIQ 268
Query: 181 ----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
+ DR V+I T+G++P A + E G+ + H YGLTETA + +
Sbjct: 269 HYRANDGDVVTQGDRDVRIATAGSAPATATIESVEDEFGWRIIHIYGLTETAPIITTSNS 328
Query: 236 KSQWNTLADTERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+ ER R LK +QG + + D+ VV E G V DG + GEIV + +M
Sbjct: 329 PRRI-----AERGRELKVKQGSQAL-CTDIRVVD-EDGNDVPRDGTAIGEIVVQGNQVMD 381
Query: 295 GYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
YL E + D +F+TGD+ DG ++I DR KD+IISGGENISS E+E
Sbjct: 382 RYLNKPEITEEAFNDRVEGYFHTGDLATWDEDGMVQIMDRRKDIIISGGENISSIELEDE 441
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSV 412
LY +P + + A++ + WG+ P A V TE+ I+EF R R+ Y +
Sbjct: 442 LYDHPDVLKAAVIPAPSEDWGETPMAIVVPT--ADSDVTEQDILEFLRERVASYKVPAGI 499
Query: 413 IIEDELPKTATGKIQKFVLRE 433
D LP+TATGKIQK+ LRE
Sbjct: 500 DFRDSLPETATGKIQKYELRE 520
>gi|50548333|ref|XP_501636.1| YALI0C09284p [Yarrowia lipolytica]
gi|49647503|emb|CAG81939.1| YALI0C09284p [Yarrowia lipolytica CLIB122]
Length = 585
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/374 (36%), Positives = 215/374 (57%), Gaps = 10/374 (2%)
Query: 72 VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPV-------FLW 124
VQ E E + + L YTSGTT PK V + HR +++ +S++I+ + + V +LW
Sbjct: 213 VQNEDEDEILGLFYTSGTTGKPKAVEYTHRSVYLCAMSNIIEAGLNCETVDGHNRCHYLW 272
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSP 184
TLP+FH GW++ + + AV GT++ LRK++ I+ ++ +TH A V NML ++P
Sbjct: 273 TLPLFHAAGWTFPYSVTAVRGTHVLLRKIEPDYIWDLLVDDRITHFNAAPTVNNMLVNNP 332
Query: 185 STKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLAD 244
+ L + V++ + + P AA+ + + H YGLTE+ G V + W+
Sbjct: 333 KARRLPQTVRVTVAASPPSAALFNKMFDMNLHPVHMYGLTESYGPFVRNYFLQDWHGATG 392
Query: 245 TERARLKARQGVRTIGLADMDVV-HPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
ER L ARQG +G + V+ + + V +GQ GEIV R ++M Y KD E +
Sbjct: 393 DERYALMARQGFAFVGSQSVQVIANNDINQPVPRNGQEIGEIVCRGNAVMARYHKDPEAT 452
Query: 304 SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVA 363
+ + WF+TGD+ VV+ DG ++I DR KD+IISGGENISS VE ++ + EVA
Sbjct: 453 AKAF-EQGWFHTGDLAVVNPDGSIKILDRKKDIIISGGENISSVAVEGIICKYDNVLEVA 511
Query: 364 LVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTAT 423
+V D+ +G+ P AF+ LK + SK + +I + R R+ Y + V + D+LP+T+T
Sbjct: 512 VVGIPDEKYGEVPKAFLILK-DKSKPFDTDKMIAWMRERMGAYQIPRQVSVVDDLPRTST 570
Query: 424 GKIQKFVLREIVNA 437
GKI+K VLR+ V A
Sbjct: 571 GKIKKNVLRDSVQA 584
>gi|448473402|ref|ZP_21601544.1| AMP-dependent synthetase and ligase [Halorubrum aidingense JCM
13560]
gi|445818914|gb|EMA68763.1| AMP-dependent synthetase and ligase [Halorubrum aidingense JCM
13560]
Length = 538
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/376 (38%), Positives = 208/376 (55%), Gaps = 19/376 (5%)
Query: 71 WVQPESEWDP-MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMF 129
+ +PE + D + +NYTSGTT PKGV HR + I I ++ V+LWTLPMF
Sbjct: 156 YERPEMDEDEVITINYTSGTTGDPKGVCRTHRAETLHAYLITIHQEITDEDVYLWTLPMF 215
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML----SSSPS 185
H NGW + + + +G +IC R VDV ++ ++ GV++ C A VLNML +
Sbjct: 216 HVNGWGHIYAITGMGARHICTRGVDVAEVFDRVRGEGVSYFCAAPTVLNMLGDHHAEHGG 275
Query: 186 TKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLAD 244
+ V++ T+GA+PP A + ES G+ + H YG TET V + K + +D
Sbjct: 276 ATTGENDVRVATAGAAPPEATIRTVESEFGWDLKHVYGATETGPLVTTSDAKRHFEADSD 335
Query: 245 TERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS- 303
ER +K QG+ +G D+ VV E G V DG++ GEIV R +M Y E +
Sbjct: 336 -ERFAVKKTQGIGYLG-TDVRVV-DENGEDVAADGETIGEIVVRGNQVMDRYWNKPEATE 392
Query: 304 -SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEV 362
+ R + +++ GD+ VV DG++ I+DR KD+IISGGENISS E+E L+ + +++V
Sbjct: 393 EAFSERLDGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDIVSDV 452
Query: 363 ALVAQRDKFWGKRPCAFVSLKWELSKKP-----TEEAIIEFCRARLPHYMAHKSVIIEDE 417
A++ D+ WG+ P AFV + S P T E + F R R+ Y V E
Sbjct: 453 AVIPAPDEQWGETPKAFVVPE---SGDPDDAGATSEELRAFVRERVATYKTPGEVEFVAE 509
Query: 418 LPKTATGKIQKFVLRE 433
LP TATGKIQK+ LR+
Sbjct: 510 LPTTATGKIQKYELRK 525
>gi|398409606|ref|XP_003856268.1| hypothetical protein MYCGRDRAFT_66052 [Zymoseptoria tritici IPO323]
gi|339476153|gb|EGP91244.1| hypothetical protein MYCGRDRAFT_66052 [Zymoseptoria tritici IPO323]
Length = 592
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 240/467 (51%), Gaps = 48/467 (10%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL ++ + H+E ++ VD + L L P P +I D + P
Sbjct: 126 RLKEDDITYIFDHAEVDMIIVDAEFQHLLNGFRKLHPK-----VPFIIDTDTDQDTGPYD 180
Query: 63 ------------TVGHPNFKWVQPESE---WDPM-ALNYTSGTTSSPKGVVHCHRGLFII 106
GH W + E+E D M A+ YTSGTTS PKGV + HR ++
Sbjct: 181 QAVLEGLQEDERNGGH---GWARLETEVAQEDSMLAIAYTSGTTSRPKGVEYTHRSAYLA 237
Query: 107 TVSSLIDWRIPNQPV------FLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYS 160
+V ++I+ + +LWTLPMFH GW++ W + AV GT+ CLRK++ P I+
Sbjct: 238 SVGNVIESALNTHSSKATRCHYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIEYPYIWK 297
Query: 161 VIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRT-ESLGFVVSH 219
++K ++H A V +L + P+ + L+ PV++ T ASPP A L T E+L H
Sbjct: 298 LLKEEHISHFNAAPTVNTLLCADPNAEKLEDPVRV-TVAASPPTAHLFETMENLNLRPVH 356
Query: 220 SYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP---ETGM--- 273
YGLTET G + +W+ L E+ ARQG ++ V+ E+G
Sbjct: 357 VYGLTETYGPITKGYQLPEWDNLDVKEKYAKMARQGHGSVVSLPARVIKTKMDESGAWEN 416
Query: 274 -----SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLE 328
+V DG+ GEIVF GY KD + ++GD+ V H DG ++
Sbjct: 417 TDKIENVAKDGKEIGEIVFVGNICAKGYYKDPAATRKLFAGGVQ-HSGDLAVWHPDGSIQ 475
Query: 329 IKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSK 388
I DR+KD+IISGGENISS +E +L +P + E A VA +D+ WG+RP AF+++K
Sbjct: 476 ILDRAKDIIISGGENISSVALEGMLVTHPDVLEAACVAVKDEQWGERPKAFITVKSGKQG 535
Query: 389 KPTEEAIIEFCRAR--LPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
T E II + + + + +M + V I +ELPKT+TGK++K VLR+
Sbjct: 536 SITGEEIISWAKNKSGISRFMVPREVEILEELPKTSTGKLRKNVLRD 582
>gi|296824906|ref|XP_002850730.1| luciferin 4-monooxygenase [Arthroderma otae CBS 113480]
gi|238838284|gb|EEQ27946.1| luciferin 4-monooxygenase [Arthroderma otae CBS 113480]
Length = 574
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 212/372 (56%), Gaps = 14/372 (3%)
Query: 72 VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPV---FLWTLPM 128
Q E +AL YTSGTT+ PKGV + HRG ++ ++++I+ + Q +LW LPM
Sbjct: 198 AQAADEESLIALAYTSGTTARPKGVEYIHRGCYLAALANIIESGLNFQQGRCGYLWILPM 257
Query: 129 FHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKP 188
FH GW++ W + AV GT+ CLRKVD P I+ ++K +TH A V +L ++ +
Sbjct: 258 FHAMGWTFPWSVTAVRGTHYCLRKVDYPAIWRMLKEENITHFNAAPTVNTLLCAAKEAER 317
Query: 189 LDRPVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTER 247
L RPV++ T ASPP A L + S+ H YGLTET G + + W+T+ E+
Sbjct: 318 LPRPVRV-TVAASPPTAHLFEQMTSVNLHPVHVYGLTETYGPITKGYYMPSWDTIPIKEK 376
Query: 248 ARLKARQGVRTIGLADMDVVH---PE-TGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
+ ARQG + V+ PE T + V+ DG+ GEIVF GY KD +
Sbjct: 377 YQKMARQGHGFLTSLPARVIKTDVPEGTIIDVRKDGKEIGEIVFTGNICARGYYKDAAAT 436
Query: 304 SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVA 363
++GD+ V H DG ++I DR+KD+IISGGENISS +E++L +P I E
Sbjct: 437 DKLFA-GGVLHSGDLAVWHPDGAVQILDRAKDIIISGGENISSVALEAMLATHPDILEAG 495
Query: 364 LVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKT 421
+VA D WG+RP A+V++ + K+ T II + + + + +M + V I ELPKT
Sbjct: 496 VVAVSDAHWGERPKAYVTI--QAGKQVTGSEIIAWAKNSSGISRFMVPREVEIVSELPKT 553
Query: 422 ATGKIQKFVLRE 433
+TGKI+K VLRE
Sbjct: 554 STGKIKKNVLRE 565
>gi|389632329|ref|XP_003713817.1| AMP-binding domain-containing protein [Magnaporthe oryzae 70-15]
gi|351646150|gb|EHA54010.1| AMP-binding domain-containing protein [Magnaporthe oryzae 70-15]
gi|440475778|gb|ELQ44440.1| AMP-dependent synthetase and ligase [Magnaporthe oryzae Y34]
gi|440489386|gb|ELQ69042.1| AMP-dependent synthetase and ligase [Magnaporthe oryzae P131]
Length = 587
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 211/375 (56%), Gaps = 15/375 (4%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP---NQPVFLWTLPMF 129
QP E D +A+ +TSGTTS PKGV + HRG ++ ++++++ + + +LWTLPMF
Sbjct: 204 QPNDEDDIIAIPFTSGTTSKPKGVEYTHRGAYLAALANIVESGLNYNVGRCKYLWTLPMF 263
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPL 189
H GW++ W + AV GT++CLRK+D P+I+ ++ VTH A V +L ++ + L
Sbjct: 264 HAVGWTFPWAVTAVRGTHVCLRKIDYPLIWRLLTGERVTHFNAAPTVCTLLCAADEAQRL 323
Query: 190 DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERA 248
P +T ASPP A L R + L H YG+TET G + W TL + ++
Sbjct: 324 PDPPVRVTVAASPPTAHLFRQMTELNLSPVHVYGMTETYGPITKGYHMPAWETLPEADKF 383
Query: 249 RLKARQGVRTIGLADMDVVHPETG-----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
ARQG + + +V PE + V DG GEIVF GY D E +
Sbjct: 384 ARMARQGHGFLTSLPIRIVKPEEAENGVLIDVAKDGVEIGEIVFAGNICAKGYYNDPEAT 443
Query: 304 SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVA 363
M ++GD+ V H DG +I DR KD+IISGGENISS +ES+L +P + E
Sbjct: 444 KK-MFAGGVLHSGDLAVWHPDGSAQILDRQKDIIISGGENISSVALESMLVQHPDVLEAG 502
Query: 364 LVAQRDKFWGKRPCAFVSLKW--ELSKKP-TEEAIIEFCR--ARLPHYMAHKSVIIEDEL 418
+VA D WG+RP A+V+++ E +P T + +I++ + + + +M + V I DEL
Sbjct: 503 VVAVPDSHWGERPKAYVTVRRSKEAGMEPLTGQGLIDWAKHQSAISKFMIPREVEIVDEL 562
Query: 419 PKTATGKIQKFVLRE 433
PKT+TGKI+K LRE
Sbjct: 563 PKTSTGKIKKNELRE 577
>gi|385803098|ref|YP_005839498.1| acyl-CoA synthetase [Haloquadratum walsbyi C23]
gi|339728590|emb|CCC39745.1| acyl-CoA synthetase [Haloquadratum walsbyi C23]
Length = 538
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 151/411 (36%), Positives = 228/411 (55%), Gaps = 32/411 (7%)
Query: 46 LPKPVLIHDDVSATSSPTVGHP-------NFKWVQPE-SEWDPMALNYTSGTTSSPKGVV 97
+P I +D+S T++ H + ++ +P SE + + +NYTSGTT PKGV
Sbjct: 124 VPTETFITNDISETNTEGKWHEFDDIIAQSTEYSRPSMSEDEVVTINYTSGTTGDPKGVC 183
Query: 98 HCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPI 157
HR + I +I + V+LWTLPMFH NGW + + + +GG ++C R +D
Sbjct: 184 RTHRTETLHAQYVSIHQQISDGDVYLWTLPMFHVNGWGHIYAITGLGGKHVCTRGIDAEW 243
Query: 158 IYSVIKHHGVTHICGALVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRT-- 210
I+ I+ V+++C A VLNML S D V+ T+GA+PP A + RT
Sbjct: 244 IFDTIRSEDVSYLCAAPTVLNMLMDRYDSEGGVKTTGDASVRAATAGAAPPEATI-RTVE 302
Query: 211 ESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTE-RARLKARQGVRTIGLADMDVVHP 269
E G+ + H YG TET + + + L D++ R LK +QG+ +G ++ VV
Sbjct: 303 EEFGWDLLHVYGATETGPLITTSDVDRR---LDDSDNRFGLKKKQGIGYLG-TEVTVVD- 357
Query: 270 ETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYL 327
ETG V DG+S GEIV R +M Y K E + D + +++ GD+ VV +G++
Sbjct: 358 ETGERVPWDGESIGEIVVRGNQVMDRYWKKPEQTETAFSDRIDGYYHMGDLAVVDENGFI 417
Query: 328 EIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELS 387
EI+DR KD+IISGGENISS E+E L+ + A+++VA++ + WG+ P AFV ++
Sbjct: 418 EIQDRKKDIIISGGENISSIELEDTLFSHEAVSDVAVIPVPSEEWGESPKAFVV---PVT 474
Query: 388 KKP-----TEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
P +E +IE C+ L Y + + +ELP+TATGKIQK+ LRE
Sbjct: 475 ANPQTSNVSESELIEHCKGMLAGYKIPREIEFVNELPRTATGKIQKYELRE 525
>gi|400602653|gb|EJP70255.1| AMP-binding enzyme [Beauveria bassiana ARSEF 2860]
Length = 568
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 147/413 (35%), Positives = 222/413 (53%), Gaps = 33/413 (7%)
Query: 49 PVLIHDDVSATSSPTVGHPNFKWVQ-------------------PESEWDPMALNYTSGT 89
P+++ +D + P G N ++ E+E D +A+ +TSGT
Sbjct: 152 PIIVDNDTDVITGPQAGQYNQAVMEGLAYDAEQGAKGWAGLHAHAENEDDMLAIPFTSGT 211
Query: 90 TSSPKGVVHCHRGLFIITVSSLIDWRIPNQP--VFLWTLPMFHENGWSYSWGMAAVGGTN 147
TS PKGVV+ HRG ++ V+++I+ + NQ +LWTLPMFH GW++ W + AV G N
Sbjct: 212 TSKPKGVVYTHRGAYLAAVANIIESGL-NQGRCKYLWTLPMFHACGWTFPWSVVAVRGVN 270
Query: 148 ICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVL 207
+CLRK+D PII+ ++K GVTH A V +L ++ L +PV++ T ASPP L
Sbjct: 271 VCLRKIDYPIIWRLLKDEGVTHFNAAPTVNTLLVAAKEAAKLPQPVRV-TVAASPPTGHL 329
Query: 208 L-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDV 266
+ L + H YG+TET G + C +W+ L E+ ARQG I + +
Sbjct: 330 FEQMTDLNLIPVHVYGMTETYGPITKCYTLPEWDNLPPAEKYAKMARQGHGFITSLPIRI 389
Query: 267 VHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVH 322
+ P+ + V DG+ GEIVF Y KD + ++GD+ V H
Sbjct: 390 IKPDQPEDVLIDVAKDGKEIGEIVFFGNICAKEYYKDAAATKKLFAGGA-LHSGDLAVWH 448
Query: 323 SDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL 382
DG +I DR+KD+IISGGENISS +ES+L +P + E +VA WG+ P A++++
Sbjct: 449 PDGSAQILDRAKDIIISGGENISSVALESMLVQHPDVLECGVVAVPSAQWGEVPKAYITV 508
Query: 383 KWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ S + + +I + R A + +M K V + +LPKT+TGKI+K LRE
Sbjct: 509 REGRSMQGAD--LIAWARGNAAISRFMVPKEVEVVPDLPKTSTGKIKKNDLRE 559
>gi|110667656|ref|YP_657467.1| long-chain-fatty-acid--CoA ligase [Haloquadratum walsbyi DSM 16790]
gi|109625403|emb|CAJ51827.1| acyl-CoA synthetase [Haloquadratum walsbyi DSM 16790]
Length = 538
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 150/411 (36%), Positives = 229/411 (55%), Gaps = 32/411 (7%)
Query: 46 LPKPVLIHDDVSATSSPTVGHP-------NFKWVQPE-SEWDPMALNYTSGTTSSPKGVV 97
+P I +D+S +++ H + ++ +P SE + + +NYTSGTT PKGV
Sbjct: 124 VPTETFITNDISESNTEGKWHEFDDIVAQSTEYSRPSMSEDEIVTINYTSGTTGDPKGVC 183
Query: 98 HCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPI 157
HR + I +I + V+LWTLPMFH NGW + + + +GG ++C R +D
Sbjct: 184 RTHRTETLHAQYVSIHQQISDGDVYLWTLPMFHVNGWGHIYAITGLGGKHVCTRGIDAEW 243
Query: 158 IYSVIKHHGVTHICGALVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRT-- 210
I+ I+ V+++C A VLN+L S D PV+ T+GA+PP A + RT
Sbjct: 244 IFDTIRSENVSYLCAAPTVLNILMDRYDSEGGVKTTGDAPVRAATAGAAPPEATI-RTVE 302
Query: 211 ESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTE-RARLKARQGVRTIGLADMDVVHP 269
E G+ + H YG TET + + + L D++ R LK +QG+ +G ++ VV
Sbjct: 303 EEFGWDLLHVYGATETGPLITTSDVDRR---LDDSDNRFGLKKKQGIGYLG-TEVTVVD- 357
Query: 270 ETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYL 327
ETG V DG+S GEIV R +M Y K E + D + +++ GD+ VV +G++
Sbjct: 358 ETGERVPWDGESIGEIVVRGNQVMDRYWKKPEQTETAFSDRIDGYYHMGDLAVVDENGFI 417
Query: 328 EIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELS 387
EI+DR KD+IISGGENISS E+E L+ + A+++VA++ + WG+ P AFV ++
Sbjct: 418 EIQDRKKDIIISGGENISSIELEDTLFSHDAVSDVAVIPVPSEEWGESPKAFVV---PVT 474
Query: 388 KKP-----TEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
P +E +IE C+ L Y + + +ELP+TATGKIQK+ LRE
Sbjct: 475 ANPQTSNVSESELIEHCKGMLAGYKIPREIEFVNELPRTATGKIQKYELRE 525
>gi|222479252|ref|YP_002565489.1| AMP-dependent synthetase and ligase [Halorubrum lacusprofundi ATCC
49239]
gi|222452154|gb|ACM56419.1| AMP-dependent synthetase and ligase [Halorubrum lacusprofundi ATCC
49239]
Length = 538
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/444 (35%), Positives = 224/444 (50%), Gaps = 22/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPV-LIHDDVSATSSPT 63
RL S +L + ++ D + + A P+ T L I D +
Sbjct: 89 RLTPDDFSYMLSDAGVDAIYADAEYAANVEAIREEVPTETFLTNDADAIEGDWESFDEAL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
+ +PE E D + +NYTSGTT PKGV HR + I I + V+
Sbjct: 149 ADANPDAYERPEMDEDDVITINYTSGTTGDPKGVCRTHRAETLHAYLITIHQEITDDDVY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW + + + +G +IC R VDV ++ I+ V++ C A VLNML
Sbjct: 209 LWTLPMFHVNGWGHIYAITGMGARHICTRGVDVEAVFDRIRAEDVSYFCAAPTVLNMLGD 268
Query: 181 --SSSPSTKPLDRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFVVSCAWK 236
+ D V+ T+GA+PP A +RT E G+ + H YG TET V + K
Sbjct: 269 HYADHGGATTGDNDVRAATAGAAPPEAT-IRTVEEEFGWDLKHVYGATETGPLVTTSDAK 327
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
++ +D +R +K QG+ +G D+ VV E G V DG++ GEIV R +M Y
Sbjct: 328 RHFDADSD-DRFAVKKTQGIGYLG-TDVRVVD-ENGEDVAPDGETIGEIVVRGNQVMDRY 384
Query: 297 LK--DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
D + R +++ GD+ VV DG++ I+DR KD+IISGGENISS E+E L+
Sbjct: 385 WNKPDATEEAFSERLEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLF 444
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP-----TEEAIIEFCRARLPHYMAH 409
+ +++VA++ D+ WG+ P AFV + S P T E + F R R+ Y
Sbjct: 445 EHDVVSDVAVIPAPDERWGETPKAFVVPE---SGDPDDAGATPEELKAFVRERVADYKTP 501
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
V ELP TATGKIQK+ LRE
Sbjct: 502 GEVEFVAELPTTATGKIQKYELRE 525
>gi|327307404|ref|XP_003238393.1| hypothetical protein TERG_00382 [Trichophyton rubrum CBS 118892]
gi|326458649|gb|EGD84102.1| hypothetical protein TERG_00382 [Trichophyton rubrum CBS 118892]
Length = 574
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 213/377 (56%), Gaps = 24/377 (6%)
Query: 72 VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPV---FLWTLPM 128
Q E +AL YTSGTT+ PKGV + HRG ++ + ++I+ + Q +LW LPM
Sbjct: 198 AQAADEESLIALAYTSGTTARPKGVEYIHRGCYLAALGNIIESGLNFQQGRCGYLWILPM 257
Query: 129 FHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKP 188
FH GW++ W + AV GT+ CLRK+D P I+ ++K +TH A V +L ++ +
Sbjct: 258 FHAMGWTFPWSITAVRGTHFCLRKIDYPEIWRMLKQENITHFNAAPTVNTLLCAAKQAER 317
Query: 189 LDRPVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTER 247
L RPV++ T ASPP A L + S+ H YGLTET G + W+T+ E+
Sbjct: 318 LSRPVRV-TVAASPPTAHLFEQMTSVNLHPVHVYGLTETYGPITKAYHMPLWDTIPLKEK 376
Query: 248 ARLKARQG--------VRTIGLADMDVVHPE-TGMSVKHDGQSQGEIVFRSGSIMLGYLK 298
+ ARQG VR I DV PE T + V+ DG+ GEIVF GY K
Sbjct: 377 YKRMARQGHGFLTSLPVRVI---KTDV--PEGTIIDVRKDGKEIGEIVFTGNICARGYYK 431
Query: 299 DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPA 358
D + ++GD+ V HSDG ++I DR+KD+IISGGENISS +E++L +P
Sbjct: 432 DAAATDKLFA-GGVLHSGDLAVWHSDGAIQILDRAKDIIISGGENISSVALEAMLATHPD 490
Query: 359 INEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIED 416
I EV +VA D WG+RP A+V+ + ++ T II + + + + +M + V I
Sbjct: 491 ILEVGVVAVSDAHWGERPKAYVTT--QTGRQVTGPDIIAWAKNSSGISRFMVPREVEIVP 548
Query: 417 ELPKTATGKIQKFVLRE 433
ELPKT+TGKI+K VLRE
Sbjct: 549 ELPKTSTGKIKKNVLRE 565
>gi|448688371|ref|ZP_21694204.1| medium-chain acyl-CoA ligase [Haloarcula japonica DSM 6131]
gi|445779432|gb|EMA30362.1| medium-chain acyl-CoA ligase [Haloarcula japonica DSM 6131]
Length = 539
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 224/438 (51%), Gaps = 27/438 (6%)
Query: 14 LLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS------SPTVGHP 67
+L +E ++ DY+ A + P +P + + +D A +
Sbjct: 98 ILSDAEVDAVYADYEY------AEKIEPIRDEVPTEIFVTNDTDAVDGDWESFDEIIEEA 151
Query: 68 NFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTL 126
+ +PE E D + +NYTSGTT PKGV HR + + + + V+LWTL
Sbjct: 152 GTDYERPEMDEDDLITINYTSGTTGDPKGVCRTHRTETLHAYLVALHQELSDDDVYLWTL 211
Query: 127 PMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPST 186
PMFH NGW + + + +G ++C R VD I+ ++ V+++CGA VLN+L+ +
Sbjct: 212 PMFHVNGWGHIFSVTGMGAKHVCTRGVDAEGIFDAVRTENVSYLCGAPTVLNILADRYAA 271
Query: 187 KPLD------RPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCAWKSQW 239
+ V+I T+G++PP AV+ E G+ + H YG TET V + + +
Sbjct: 272 HDGEIETTGANDVRIATAGSAPPEAVIRTVEDDFGWYLKHVYGATETGPLVTTSDARRFF 331
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLK- 298
+D R +K RQG+ +G D+ VV E G V HD ++ GE+V R +M Y
Sbjct: 332 EDGSDA-RFSIKKRQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNK 388
Query: 299 -DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
+Q + R +++ GD+ V DG + I+DR KD+IISGGENISS E+E LY +
Sbjct: 389 PEQTAEAFSDRVEGYYHMGDLATVDEDGMIAIRDRKKDIIISGGENISSIELEDTLYEHD 448
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIE 415
A+++VA++ WG+ P AFV P T E + F R +L Y + V
Sbjct: 449 AVSDVAVIPAPSDEWGETPKAFVVPDSGDPDNPGVTAEDLRNFTREQLATYKVVRRVEFV 508
Query: 416 DELPKTATGKIQKFVLRE 433
+ELP TATGK+QK+ LRE
Sbjct: 509 EELPTTATGKVQKYELRE 526
>gi|448468905|ref|ZP_21600002.1| AMP-dependent synthetase and ligase [Halorubrum kocurii JCM 14978]
gi|445810015|gb|EMA60048.1| AMP-dependent synthetase and ligase [Halorubrum kocurii JCM 14978]
Length = 538
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/443 (34%), Positives = 225/443 (50%), Gaps = 20/443 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPV-LIHDDVSATSSPT 63
RL + +L + ++ D + + A P+ T L + D + +
Sbjct: 89 RLTPDDFAYMLSDAGVDAIYADAEYAATVEAVREEVPTETFLTNDADAVEGDWESFDAAL 148
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
+ +PE E D + +NYTSGTT PKGV HR + I I + V+
Sbjct: 149 ADADPEGYERPEMDEDDVITINYTSGTTGDPKGVCRTHRAETLHAYLITIHQEITDDDVY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW + + + +G ++C R VDV ++ I+ V++ C A VLNML
Sbjct: 209 LWTLPMFHVNGWGHIYAITGMGARHVCTRGVDVEAVFDRIRTEDVSYFCAAPTVLNMLGD 268
Query: 181 --SSSPSTKPLDRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFVVSCAWK 236
+ D V+ T+GA+PP A +RT E G+ + H YG TET V + K
Sbjct: 269 HYAEHGGATTGDNDVRAATAGAAPPEAT-IRTVEEEFGWELKHVYGATETGPLVTTSDAK 327
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
++ AD +R +K QG+ +G D+ VV E G V DG++ GEIV R +M Y
Sbjct: 328 RHFDADAD-DRFAVKKTQGIGYLG-TDVRVVD-ENGEDVTADGETIGEIVVRGNQVMDRY 384
Query: 297 LKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
E + + R +++ GD+ VV DG++ I+DR KD+IISGGENISS E+E L+
Sbjct: 385 WNKPEATEEAFSERLEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLF 444
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKW----ELSKKPTEEAIIEFCRARLPHYMAHK 410
+ +++VA++ D+ WG+ P AFV + + P E + F R R+ Y
Sbjct: 445 EHEVVSDVAVIPAPDERWGETPKAFVVPETGDPDDAGATPDE--LRSFVRERVADYKTPG 502
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V ELP TATGKIQK+ LRE
Sbjct: 503 EVEFVAELPTTATGKIQKYELRE 525
>gi|448537811|ref|ZP_21622680.1| AMP-dependent synthetase and ligase [Halorubrum hochstenium ATCC
700873]
gi|445701771|gb|ELZ53744.1| AMP-dependent synthetase and ligase [Halorubrum hochstenium ATCC
700873]
Length = 538
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 154/441 (34%), Positives = 226/441 (51%), Gaps = 16/441 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPV-LIHDDVSATSSPT 63
RL S +L + ++ D + + A P+ T L + D + +
Sbjct: 89 RLTPDDFSYMLSDAGVDAIYADAEYAANVEAVRDEVPTETFLTNDADAVEGDWESFDAAL 148
Query: 64 VGHPNFKWVQPESEWDP-MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
+ +PE + D + +NYTSGTT PKGV HR + I I + V+
Sbjct: 149 DEADPDAYERPEMDEDEVITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW + + + +G ++C R VDV + I+ V++ C A VLNML
Sbjct: 209 LWTLPMFHVNGWGHIYAITGMGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGD 268
Query: 181 --SSSPSTKPLDRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFVVSCAWK 236
+ D V++ T+GA+PP A +RT E G+ + H YG TET V + K
Sbjct: 269 HHAEHGGATTGDADVRVATAGAAPPEAT-IRTVEEEFGWDLKHVYGATETGPLVTTSDAK 327
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
++ AD +R +K QG+ +G D+ VV E G V DG++ GEIV R +M Y
Sbjct: 328 RHFDADAD-DRFGVKKTQGIGYLG-TDVRVV-DEDGEDVAADGETIGEIVVRGNQVMDRY 384
Query: 297 LKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
E + + R +++ GD+ VV DG++ I+DR KD+IISGGENISS E+E L+
Sbjct: 385 WNKPEATEAAFSERLEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLF 444
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKK--PTEEAIIEFCRARLPHYMAHKSV 412
+ A+++VA++ D+ WG+ P AFV + S T E + F R R+ Y V
Sbjct: 445 EHDAVSDVAVIPAPDERWGETPKAFVVPESGDSDDAGATTEELKAFVRERVADYKTPGEV 504
Query: 413 IIEDELPKTATGKIQKFVLRE 433
+ LP TATGKIQK+ LRE
Sbjct: 505 EFVEALPTTATGKIQKYELRE 525
>gi|289581044|ref|YP_003479510.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|448284713|ref|ZP_21475969.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|289530597|gb|ADD04948.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
gi|445569423|gb|ELY23996.1| AMP-dependent synthetase and ligase [Natrialba magadii ATCC 43099]
Length = 541
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 148/449 (32%), Positives = 231/449 (51%), Gaps = 29/449 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI---------HDD 55
RL + + +L+ + +++ DY+ + A P+ T + V DD
Sbjct: 89 RLTPEDYAYILNDAGVDVIYADYEYAEKIEAIREEVPTETFITNDVDAVEAGSDWESFDD 148
Query: 56 VSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
+ A ++P P +E + + +NYTSGTT PKGV HR + I
Sbjct: 149 LLAEATPEYDRPEM------TEDELITINYTSGTTGDPKGVCRTHRNETLHAYLISIHQE 202
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
I + V+LWTLPMFH NGW + + + +G T++C R VD I I+ V+++CGA
Sbjct: 203 IRDDDVYLWTLPMFHVNGWGHIYAITGMGATHVCTRGVDAESIIETIQEEDVSYLCGAPT 262
Query: 176 VLNML---SSSPSTKPLDR---PVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAG 228
VLN+L + +P R V+I T+G+SPP A + E + + H YG TET
Sbjct: 263 VLNLLIDYYEDAADEPEMRGGTDVRIATAGSSPPEATIRTVEDEFDWRLKHVYGATETGP 322
Query: 229 FVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ + + ++ +D ER +K RQG+ +G ++ VV E G V D + GE+V R
Sbjct: 323 LITTSDARRHFDADSD-ERFAIKKRQGLGFLG-TEVRVVD-EDGADVPRDSTTIGEVVVR 379
Query: 289 SGSIMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+M Y + + D +F+TGD+G V +G + I+DR KD+IISGGENISS
Sbjct: 380 GNQVMERYWNKPDATEEAFSDRIEGYFHTGDLGTVDENGLVAIQDRKKDIIISGGENISS 439
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLP 404
E+E L+ +P +++VA++ + WG+ P AFV +P + + ++EF R L
Sbjct: 440 IELEDTLFDHPGVSDVAVIPAPSEQWGETPKAFVVPNSGDPNEPGVSTDELVEFTRENLA 499
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y + +LP TATGK+QK+ LRE
Sbjct: 500 GYKTVHRIEFVKQLPTTATGKVQKYELRE 528
>gi|258576695|ref|XP_002542529.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237902795|gb|EEP77196.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 575
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 155/457 (33%), Positives = 235/457 (51%), Gaps = 36/457 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS---- 60
RL + ++ + HSE + VD + L P PV++ D AT
Sbjct: 116 RLKPEDITYIFTHSEVDFIIVDEEYLHLLDGFREGRPGF-----PVIVDTDTDATEGELS 170
Query: 61 --------------SPTVGHP-NFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
+ GH N E E +AL YTSGTT+ PKGV + HRG ++
Sbjct: 171 GPFDAAILEGLKHDTEAGGHGWNGLETHAEDEESLIALAYTSGTTARPKGVEYIHRGCYL 230
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
V+++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+ ++
Sbjct: 231 AAVANVIESGLNYHQGRCRYLWTLPMFHAMGWTFPWAITAVRGTHYCLRKIDYPQIWRLL 290
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
K +TH A V +L SS + L PV++ + + P + + L H YG
Sbjct: 291 KEEKITHFNAAPTVNTVLCSSKEAERLPSPVRVTVAASPPTPHLFEQMMGLNLHPVHVYG 350
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVKHD 278
+TET G + +W+ L E+ ARQG + + V+ E T + V+ +
Sbjct: 351 MTETYGPITKGYHMPEWDALPVKEKYERMARQGHGFVTSLPVRVIKTEVPEGTVIDVERN 410
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
G+ GEIVF GY KD E +S ++GD+ V H DG ++I DR+KD+II
Sbjct: 411 GKEIGEIVFTGNICARGYYKDPEATSKLF-AGGVLHSGDLAVCHPDGSIKILDRAKDIII 469
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +E++L +P I EV +VA D WG+RP AF+++ + + E +IE+
Sbjct: 470 SGGENISSVALEAMLATHPDILEVGVVAVADSHWGERPKAFITV--QPGRTLRGEDVIEW 527
Query: 399 CR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + +M + V + ELPKT+TGK++K VLRE
Sbjct: 528 AKHTSGISRFMVPREVEVLSELPKTSTGKVKKNVLRE 564
>gi|402221849|gb|EJU01917.1| AMP-dependent synthetase and ligase [Dacryopinax sp. DJM-731 SS1]
Length = 572
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 147/453 (32%), Positives = 233/453 (51%), Gaps = 38/453 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L HS +KL+ D++ + L P N PV+I D P
Sbjct: 129 RLTKGEIQYILEHSGAKLILCDHEFT-------HLLPENH---APVIISQDTGRVGDP-- 176
Query: 65 GHPNF----KWVQPESEWDPM----------ALNYTSGTTSSPKGVVHCHRGLFIITVSS 110
+ +F + E W + L YTSGTT PKGV+ +RG ++ V++
Sbjct: 177 -YEDFLARGRRFSQERGWSGLPIEPDENAGSCLCYTSGTTGRPKGVLTTYRGSYLAAVAN 235
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHI 170
+ ++ ++LWTLPMFH GW+Y W + + + LR V+ +I+ K+ ++H
Sbjct: 236 AYETKMDLYSIYLWTLPMFHACGWTYPWAITFSFASQVTLRTVNYDLIWKNFKNSRISHY 295
Query: 171 CGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFV 230
C A V + ++ +++P++ + +GA+P A ++ E +G VSH YGLTET G
Sbjct: 296 CAAPTVQIGIVNARHASYVEQPLRAIIAGAAPTAHLIGSLEKIGISVSHVYGLTETYGPF 355
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKHDGQSQGEIV 286
+ ++ TL ER+ ARQG ++ V+ + + + DG GEI
Sbjct: 356 TISYDRPEYKTLTVDERSVFFARQGHSFATADEIRVIQHDNDSKDLVDIPKDGVVLGEIT 415
Query: 287 FRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
R +M Y +D + ++ + +F++GD+ + H DG + ++DRSKD+IISGGEN SS
Sbjct: 416 ARGNVVMKEYFRDPKATAEAFK-GGYFHSGDLAIWHPDGSIAVQDRSKDLIISGGENASS 474
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSL------KWELSKKPTEEAIIEFCR 400
+E VL P + E +VA+ + WG+RP AFV L KW+ K E + +F R
Sbjct: 475 LAIEQVLSKFPPVLEATVVARPHEKWGERPMAFVILHSHEEGKWKGKDKEFEIELKKFAR 534
Query: 401 ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
LP + + V I ELPKT+TGKIQK +LR+
Sbjct: 535 QSLPGFAVPEWVAIVKELPKTSTGKIQKNILRQ 567
>gi|325087678|gb|EGC40988.1| AMP dependent synthetase and ligase [Ajellomyces capsulatus H88]
Length = 581
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 158/463 (34%), Positives = 242/463 (52%), Gaps = 36/463 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +S + +HSE + VD + PL L+ F P++I D A
Sbjct: 123 RLKPEDISYIFNHSEVDAIVVDEEFVPL----LNEFKKQNGH-VPLIIDTDTDAVEGELS 177
Query: 65 G---------------HPNFKW----VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G N W Q E +AL YTSGTTS PKGV + HRG ++
Sbjct: 178 GPFDQAVLEGLHFDTSSGNRGWQGLEAQTPDEDALIALAYTSGTTSRPKGVEYIHRGCYL 237
Query: 106 ITVSSLIDWRIP---NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
++++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRKVD +I+ ++
Sbjct: 238 AALANVIESGLNFNRGRCRYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKVDYSLIWRLL 297
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYG 222
K GVTH C A V +L +S + L PV++ + + P + + L H YG
Sbjct: 298 KEEGVTHYCAAPTVNIVLCNSKEAEVLPSPVRVTVAASPPTPHLFEQMAKLNLQPVHVYG 357
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVH---PE-TGMSVKHD 278
LTET G + + QW+T+ ++ + ARQG + + V+ PE T + V+ +
Sbjct: 358 LTETYGPITKGYYLPQWDTIPAEDKYKKMARQGHGFLTSLPVRVIKTDVPEGTIIDVEKN 417
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
G+ GE+VF GY K+ + + ++GD+ V H DG ++I DR+KD+II
Sbjct: 418 GEEIGEVVFVGNICAKGYYKNVDDTKKLF-SGGVLHSGDLAVWHPDGAIQILDRAKDIII 476
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ES+L +P + EV +VA D WG+RP AF++++ KK + +IE+
Sbjct: 477 SGGENISSVALESMLATHPDVFEVGVVAVPDSHWGERPKAFITVR--DGKKLDGKDVIEW 534
Query: 399 CR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNAVN 439
+ + +M + V ELPKT+TGK++K VLR V +
Sbjct: 535 AKHVGGMSRFMVPREVETVRELPKTSTGKVKKNVLRRWVKGTD 577
>gi|452988357|gb|EME88112.1| hypothetical protein MYCFIDRAFT_75948 [Pseudocercospora fijiensis
CIRAD86]
Length = 566
Score = 238 bits (608), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 150/466 (32%), Positives = 242/466 (51%), Gaps = 46/466 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL ++ + H++ ++ VD + L L + +N P+++ D + P
Sbjct: 100 RLKKDDITYIFDHADVDMIIVDAEFRQL-LDDFNQKHTNV----PLIVDTDTDEDTGPYD 154
Query: 63 ------------TVGHPNFKWV----QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFII 106
T GH W Q +E +AL+YTSGTT+ PKGV + HR ++
Sbjct: 155 QAVLEGLQHDDRTGGH---GWAGLETQVPNEDSMLALSYTSGTTARPKGVEYTHRSAYLA 211
Query: 107 TVSSLID------WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYS 160
+ ++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D P I+
Sbjct: 212 ALGNVIESGLNTSHGLAKRCHYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIDYPYIWK 271
Query: 161 VIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHS 220
++K ++H A V +L + P+ + L PV++ + + P A + R E H
Sbjct: 272 LLKEEQISHFNAAPTVNTLLLADPNAEKLQYPVRVTVAASPPTAHLFQRMEEHNLRPVHV 331
Query: 221 YGLTETAGFVVSCAWKSQWNTLADTERARLKARQG---VRTIGLADMDVVHPETGM---- 273
YG+TET G + +W+ L E+ ARQG + ++ + + E+G
Sbjct: 332 YGMTETYGPITKGYQLPEWDDLESKEKYGKMARQGHGFITSLPVRVIKTNQDESGKWDAN 391
Query: 274 ----SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEI 329
V DG+ GEIVF GY KD + ++GD+ V H+DG ++I
Sbjct: 392 EVIEDVAKDGKEIGEIVFIGNICAKGYYKDVAATKKLFA-GGVLHSGDLAVWHADGAIQI 450
Query: 330 KDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKK 389
DR+KD+IISGGENISS +ES+L +P + E A VA +DK WG+RP AF+++K
Sbjct: 451 LDRAKDIIISGGENISSVALESMLVTHPDVLEAACVAVQDKQWGERPKAFLTVKEGKKGS 510
Query: 390 PTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + I+++ + +R+ +M K + I DELPKT+TGK++K +LR+
Sbjct: 511 ISGDDIMQWAKKQSRISRFMVPKEIEIIDELPKTSTGKVRKNILRD 556
>gi|448677832|ref|ZP_21689022.1| medium-chain acyl-CoA ligase [Haloarcula argentinensis DSM 12282]
gi|445773507|gb|EMA24540.1| medium-chain acyl-CoA ligase [Haloarcula argentinensis DSM 12282]
Length = 539
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/438 (33%), Positives = 222/438 (50%), Gaps = 27/438 (6%)
Query: 14 LLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS------SPTVGHP 67
+L +E ++ DY+ A + P +P + + +D A +
Sbjct: 98 ILSDAEVDAVYADYEY------AEKIEPIRDEVPTEIFVTNDTDAVDGDWESFDEIIEEA 151
Query: 68 NFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTL 126
+ +PE E D + +NYTSGTT PKGV HR + + I + V+LWTL
Sbjct: 152 GTDYERPEMDEDDLITINYTSGTTGDPKGVCRTHRTETLHAYIVALHQEISDGDVYLWTL 211
Query: 127 PMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPST 186
PMFH NGW + + + +G ++C R VD I+ ++ V+++CGA VLN+L+
Sbjct: 212 PMFHVNGWGHIFSVTGMGAKHVCTRGVDAEGIFDAVRTEDVSYLCGAPTVLNILADRYED 271
Query: 187 KPLD------RPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCAWKSQW 239
D V+I T+G++PP AV+ E G+ + H YG TET V + + +
Sbjct: 272 HNGDIETTGANDVRIATAGSAPPEAVIRTVEDDFGWYLKHVYGATETGPLVTTSDARRFF 331
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKD 299
+D R +K RQG+ +G D+ VV E G V HD ++ GE+V R +M Y
Sbjct: 332 EDGSDA-RFSVKKRQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNK 388
Query: 300 QEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
E + D +++ GD+ V DG + I+DR KD+IISGGENISS E+E LY +
Sbjct: 389 PEQTEEAFSDRVEGYYHMGDLATVDEDGMIAIRDRKKDIIISGGENISSIELEDTLYEHD 448
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIE 415
A+++VA++ WG+ P AFV P T E + F R +L Y + V
Sbjct: 449 AVSDVAVIPAPSDEWGETPKAFVVPNSGDPDNPGVTAEDLRTFTREQLATYKVVRRVEFV 508
Query: 416 DELPKTATGKIQKFVLRE 433
+ELP TATGK+QK+ LRE
Sbjct: 509 EELPTTATGKVQKYELRE 526
>gi|393218689|gb|EJD04177.1| acetyl-CoA synthetase-like protein [Fomitiporia mediterranea
MF3/22]
Length = 540
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 160/451 (35%), Positives = 225/451 (49%), Gaps = 31/451 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPT- 63
RL V +L HS SKL+ VD++ + A PV++ D P
Sbjct: 98 RLTKSEVDYILQHSGSKLILVDHEYTHFTKDA----------KVPVIVSRDTGRFGCPYE 147
Query: 64 ------VGHPNFK-WVQPESEWDPMA---LNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
H N + W E E D A L YTSGTT PKGV+ RG ++ V + +
Sbjct: 148 EFLSKGRQHSNERGWPGLEMELDEDAGAVLCYTSGTTGRPKGVLTTLRGSYLGAVGNAYE 207
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
R+ V+LW LPMFH GW++ W + I R V I+ + GVTH CGA
Sbjct: 208 ARMTPDSVYLWVLPMFHAAGWTFPWSITFSFAAQITQRNVSNTHIWRHFLNSGVTHYCGA 267
Query: 174 LVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSC 233
V + + P L++PV + +G++P A ++ E V H YGLT T G
Sbjct: 268 PTVQLGIITHPDAIRLEKPVATIIAGSAPTAHLIGELEKKNIHVVHVYGLTYTYGPFTRG 327
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG---MSVKHDGQSQGEIVFRSG 290
+ W L+ ERA+ ARQG ++ VV+ + V DG++ GE+V R
Sbjct: 328 YAQPFWKDLSLEERAKFLARQGHAFATAQEVRVVYQDDSDELTDVPADGKTVGEVVTRGN 387
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M Y +D E + R +F +GD+ V+H DG + I+DRSKD+IISGGEN SS +E
Sbjct: 388 IVMKEYFRDPEATKKAFR-GGYFASGDLAVMHEDGSIAIQDRSKDIIISGGENASSLAIE 446
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT------EEAIIEFCRARLP 404
L + A++EVA+VA+ WG+RP AFV L K+ E + +F R+RLP
Sbjct: 447 QELAEHHAVHEVAVVARPHPKWGERPMAFVILTPAAEKEYAGRHHDFEVELKKFARSRLP 506
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLREIV 435
+ + V + DELPK +TGKI K LR IV
Sbjct: 507 GFACPEWVRVVDELPKNSTGKIMKTALRGIV 537
>gi|448456128|ref|ZP_21594981.1| AMP-dependent synthetase and ligase [Halorubrum lipolyticum DSM
21995]
gi|445812963|gb|EMA62949.1| AMP-dependent synthetase and ligase [Halorubrum lipolyticum DSM
21995]
Length = 538
Score = 238 bits (607), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 158/450 (35%), Positives = 227/450 (50%), Gaps = 34/450 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI-------HDDVS 57
RL S +L + ++ D + + A P+ T L D+V
Sbjct: 89 RLTPDDFSYMLSDAGVDAIYADAEYAANVEAVRDEVPTETFLTNDADAVDGDWESFDEVL 148
Query: 58 ATSSPTVGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
A + P + +PE E D + +NYTSGTT PKGV HR + I I
Sbjct: 149 ADADPD------GYERPEMDEDDVITINYTSGTTGDPKGVCRTHRAETLHAYLITIHQEI 202
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+ V+LWTLPMFH NGW + + + +G +IC R VDV ++ I+ V++ C A V
Sbjct: 203 TDDDVYLWTLPMFHVNGWGHIYAITGMGARHICTRGVDVEAVFDRIRTEDVSYFCAAPTV 262
Query: 177 LNML----SSSPSTKPLDRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFV 230
LNML + V+ T+GA+PP A +RT E G+ + H YG TET V
Sbjct: 263 LNMLGDHHAEHGGATTGANEVRAATAGAAPPEAT-IRTVEEEFGWELKHVYGATETGPLV 321
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+ K ++ +D +R +K QG+ +G D+ VV E G V DG++ GEIV R
Sbjct: 322 TTSDAKRHYDADSD-DRFAVKKTQGIGYLG-TDVRVVD-ENGEDVAPDGETIGEIVVRGN 378
Query: 291 SIMLGYLKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAE 348
+M Y E + + R +++ GD+ VV DG++ I+DR KD+IISGGENISS E
Sbjct: 379 QVMDRYWNKPEATEEAFSERLEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIE 438
Query: 349 VESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP-----TEEAIIEFCRARL 403
+E L+ + +++VA++ D+ WG+ P AFV + S P T E + F R R+
Sbjct: 439 LEDTLFEHEVVSDVAVIPAPDERWGETPKAFVVPE---SGDPDDAGATPEELKSFVRERV 495
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y V ELP TATGKIQK+ LRE
Sbjct: 496 ADYKTPGEVEFVAELPTTATGKIQKYELRE 525
>gi|256397158|ref|YP_003118722.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
gi|256363384|gb|ACU76881.1| AMP-dependent synthetase and ligase [Catenulispora acidiphila DSM
44928]
Length = 514
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 141/364 (38%), Positives = 205/364 (56%), Gaps = 21/364 (5%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWS 135
E D +NYTSGTT+ PKGV HR +++ V + + ++ V+L TLPMFH NGW
Sbjct: 155 GENDTATINYTSGTTARPKGVQLTHRNIWLNAVLMGLHLGVSDRDVYLHTLPMFHANGWG 214
Query: 136 YSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRP--- 192
+ + +G + LRKVD + ++ HGVT + GA V+ M+ ++ + P
Sbjct: 215 MPYVVTGLGAKQVVLRKVDGAEVLRRVEEHGVTLLNGAPTVIAMVLAAAKEWDGEIPGRD 274
Query: 193 -VKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARL 250
V+++ +GA PP+ V+ + E LG+ + YGLTETA V + +W+ L+ ERA+
Sbjct: 275 RVRVVVAGAPPPSTVIQQVEDVLGWQFNQIYGLTETAPLVTVNRTREEWDALSSLERAQN 334
Query: 251 KARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDN 310
R GV ++G T M DG E++ RS ++ GY + E S +
Sbjct: 335 LMRAGVPSLG----------TQMVTDADG----EVLVRSNVVLEGYWQQPEESERALA-G 379
Query: 311 DWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDK 370
DWF+TGD G + DG+L I DR KDVII+GGEN+SS EVE LY +P I E A++ D+
Sbjct: 380 DWFHTGDGGAISDDGHLTISDRKKDVIITGGENVSSIEVEDALYKHPGIAECAVIGVPDE 439
Query: 371 FWGKRPCAFVSLKWELSKKPTEEA-IIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKF 429
WG+ A V LK + + T EA +I+ C+ + Y A SV + LP+TATGK+QKF
Sbjct: 440 KWGETIKALVVLKEDHASLATTEAEVIKHCKGLIAGYKAPTSVEFRETLPRTATGKLQKF 499
Query: 430 VLRE 433
LRE
Sbjct: 500 KLRE 503
>gi|225556668|gb|EEH04956.1| AMP dependent synthetase and ligase [Ajellomyces capsulatus G186AR]
Length = 735
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 161/458 (35%), Positives = 241/458 (52%), Gaps = 38/458 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +S + +HSE + VD + PL L+ F P++I D A
Sbjct: 277 RLKPEDISYIFNHSEVDAIVVDEEFVPL----LNEFKKQN-GHVPLIIDTDTDAVEGELS 331
Query: 65 G---------------HPNFKW----VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G N W Q E +AL YTSGTTS PKGV + HRG ++
Sbjct: 332 GPFDQAVLEGLHFDASSGNRGWQGLEAQTPDEDVLIALAYTSGTTSRPKGVEYIHRGCYL 391
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
++++I+ + + +LWTLPMFH GW++ W + A GT+ CLRKVD +I+ ++
Sbjct: 392 AALANVIESGLNFNQGRCRYLWTLPMFHAMGWTFPWAVTAARGTHYCLRKVDYSLIWRLL 451
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSY 221
K GVTH C A V +L +S + L PV++ T ASPP L + L H Y
Sbjct: 452 KEEGVTHYCAAPTVNTVLCNSKEAEVLPSPVRV-TVAASPPTPHLFEQMAKLNLQPVHVY 510
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVH---PE-TGMSVKH 277
GLTET G + + QW+T+ ++ + ARQG + + V+ PE T + V+
Sbjct: 511 GLTETYGPITKGYYLPQWDTIPAEDKYKKMARQGHGFLTSLPVRVIKTDVPEGTIIDVEK 570
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
+G+ GE+VF GY K+ + + ++GD+ V H DG ++I DR+KD+I
Sbjct: 571 NGEETGEVVFVGNICAKGYYKNVDDTKKLF-SGGVLHSGDLAVWHPDGAIQILDRAKDII 629
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +ES+L +P + EV +VA D WG+RP AF++++ KK + +IE
Sbjct: 630 ISGGENISSVALESMLATHPDVFEVGVVAVPDSHWGERPKAFITVR--DGKKLDGKDVIE 687
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + +M + V ELPKT+TGK++K VLR
Sbjct: 688 WAKHVGGISRFMVPREVEAVRELPKTSTGKVKKNVLRR 725
>gi|448639827|ref|ZP_21676975.1| medium-chain acyl-CoA ligase [Haloarcula sinaiiensis ATCC 33800]
gi|445762354|gb|EMA13575.1| medium-chain acyl-CoA ligase [Haloarcula sinaiiensis ATCC 33800]
Length = 539
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 223/438 (50%), Gaps = 27/438 (6%)
Query: 14 LLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS------SPTVGHP 67
+L +E ++ DY+ A + P +P + + +D A +
Sbjct: 98 ILSDAEVDAVYADYEY------ADKIEPIRDEVPTDIFVTNDTDAVDGDWESFDDIIEEA 151
Query: 68 NFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTL 126
+ +PE E D + +NYTSGTT PKGV HR + + I + V+LWTL
Sbjct: 152 GTDYERPEMDEDDLITINYTSGTTGDPKGVCRTHRTETLHAYIVALHQEISDDDVYLWTL 211
Query: 127 PMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPST 186
PMFH NGW + + + +G ++C R VD I+ ++ V+++CGA VLN+L+ +
Sbjct: 212 PMFHVNGWGHIFSVTGMGAKHVCTRGVDAEGIFDAVRTEDVSYLCGAPTVLNILADRYAA 271
Query: 187 KPLD------RPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCAWKSQW 239
+ V+I T+G++PP AV+ E G+ + H YG TET V + + +
Sbjct: 272 HDGEIETTGANDVRIATAGSAPPEAVIRTVEDDFGWYLKHVYGATETGPLVTTSDARRFF 331
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKD 299
+D R +K RQG+ +G D+ VV E G V HD ++ GE+V R +M Y
Sbjct: 332 EDGSDA-RFSVKKRQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNK 388
Query: 300 QEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
E + D +++ GD+ V DG + I+DR KD+IISGGENISS E+E LY +
Sbjct: 389 PEQTEEAFSDRVEGYYHMGDLATVDEDGMVAIRDRKKDIIISGGENISSIELEDTLYEHD 448
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIE 415
A+++VA++ WG+ P AFV P T E + F R +L Y + V
Sbjct: 449 AVSDVAVIPAPSDEWGETPKAFVVPNSGDPDNPGVTAEDLRTFTREQLATYKVVRRVEFV 508
Query: 416 DELPKTATGKIQKFVLRE 433
+ELP TATGK+QK+ LRE
Sbjct: 509 EELPTTATGKVQKYELRE 526
>gi|344211763|ref|YP_004796083.1| medium-chain acyl-CoA ligase [Haloarcula hispanica ATCC 33960]
gi|343783118|gb|AEM57095.1| medium-chain acyl-CoA ligase [Haloarcula hispanica ATCC 33960]
Length = 539
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 221/438 (50%), Gaps = 27/438 (6%)
Query: 14 LLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS------SPTVGHP 67
+L +E ++ DY+ A + P +P + + +D A +
Sbjct: 98 ILSDAEVDAVYADYEY------ADKIEPIRDEVPTDIFVTNDTDAVDGDWESFDEIIEEA 151
Query: 68 NFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTL 126
+ +PE E D + +NYTSGTT PKGV HR + + I + V+LWTL
Sbjct: 152 GTDYERPEMDEDDLITINYTSGTTGDPKGVCRTHRTETLHAYIVALHQEISDDDVYLWTL 211
Query: 127 PMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPST 186
PMFH NGW + + + +G ++C R VD I+ ++ V+++CGA VLN+L+
Sbjct: 212 PMFHVNGWGHIFSVTGMGAKHVCTRGVDAEGIFDAVRTEDVSYLCGAPTVLNILADRYED 271
Query: 187 KPLD------RPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCAWKSQW 239
+ V+I T+G++PP AV+ E G+ + H YG TET V + + +
Sbjct: 272 HDGEIETTGANDVRIATAGSAPPEAVIRTVEDDFGWYLKHVYGATETGPLVTTSDARRFF 331
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKD 299
+D R +K RQG+ +G D+ VV E G V HD ++ GE+V R +M Y
Sbjct: 332 EDGSDA-RFSVKKRQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNK 388
Query: 300 QEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
E + D +++ GD+ V DG + I+DR KD+IISGGENISS E+E LY +
Sbjct: 389 PEQTEEAFSDRVEGYYHMGDLATVDEDGMIAIRDRKKDIIISGGENISSIELEDTLYEHD 448
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIE 415
A+++VA++ WG+ P AFV P T E + F R L Y + V
Sbjct: 449 AVSDVAVIPAPSDEWGETPKAFVVPNSGDPDNPGVTAEDLRNFTREELATYKVVRRVEFV 508
Query: 416 DELPKTATGKIQKFVLRE 433
+ELP TATGK+QK+ LRE
Sbjct: 509 EELPTTATGKVQKYELRE 526
>gi|448432519|ref|ZP_21585594.1| AMP-dependent synthetase and ligase [Halorubrum tebenquichense DSM
14210]
gi|445686939|gb|ELZ39238.1| AMP-dependent synthetase and ligase [Halorubrum tebenquichense DSM
14210]
Length = 538
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 145/375 (38%), Positives = 207/375 (55%), Gaps = 17/375 (4%)
Query: 71 WVQPESEWDP-MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMF 129
+ +PE + D + +NYTSGTT PKGV HR + I I + V+LWTLPMF
Sbjct: 156 YERPEMDEDEVITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVYLWTLPMF 215
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML----SSSPS 185
H NGW + + + +G ++C R VDV + I+ V++ C A VLNML +
Sbjct: 216 HVNGWGHIYAITGMGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGDHHAEHGG 275
Query: 186 TKPLDRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLA 243
D V++ T+GA+PP A +RT E G+ + H YG TET V + K ++ A
Sbjct: 276 ATTGDADVRVATAGAAPPEAT-IRTVEEEFGWDLKHVYGATETGPLVTTSDAKRHFDADA 334
Query: 244 DTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
D +R +K QG+ +G D+ VV E G V DG++ GEIV R +M Y E +
Sbjct: 335 D-DRFAVKKTQGIGYLG-TDVRVV-DEDGEDVAADGETIGEIVVRGNQVMDRYWNKPEAT 391
Query: 304 --SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
+ R +++ GD+ VV DG++ I+DR KD+IISGGENISS E+E L+ + A+++
Sbjct: 392 EAAFSERLEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDAVSD 451
Query: 362 VALVAQRDKFWGKRPCAFV---SLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDEL 418
A++ D+ WG+ P AFV S E + TEE + F R R+ Y V + L
Sbjct: 452 AAVIPAPDERWGETPKAFVVPESGDPEDAGATTEE-LKAFVRDRVADYKTPGEVEFVEAL 510
Query: 419 PKTATGKIQKFVLRE 433
P TATGKIQK+ LRE
Sbjct: 511 PTTATGKIQKYELRE 525
>gi|448510755|ref|ZP_21615968.1| AMP-dependent synthetase and ligase [Halorubrum distributum JCM
9100]
gi|448523760|ref|ZP_21618947.1| AMP-dependent synthetase and ligase [Halorubrum distributum JCM
10118]
gi|445695509|gb|ELZ47611.1| AMP-dependent synthetase and ligase [Halorubrum distributum JCM
9100]
gi|445700833|gb|ELZ52824.1| AMP-dependent synthetase and ligase [Halorubrum distributum JCM
10118]
Length = 538
Score = 238 bits (606), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 154/444 (34%), Positives = 225/444 (50%), Gaps = 22/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPV-LIHDDVSATSSPT 63
RL S +L + ++ D + + A P+ T L + D + +
Sbjct: 89 RLTPDDFSYMLSDAGVDAIYADAEYAANVEAIRDEVPTETFLTNDADAVEGDWESFDAAL 148
Query: 64 VGHPNFKWVQPESEWDP-MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
+ +PE + D + +NYTSGTT PKGV HR + I I + V+
Sbjct: 149 DDADPDAYERPEMDEDEVITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-- 180
LWTLPMFH NGW + + + G ++C R VDV + I+ V++ C A VLNML
Sbjct: 209 LWTLPMFHVNGWGHIYAITGAGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGD 268
Query: 181 --SSSPSTKPLDRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFVVSCAWK 236
+ D V++ T+GA+PP A +RT E G+ + H YG TET + + K
Sbjct: 269 HHAEHGGATTGDNDVRVATAGAAPPEAT-IRTVEEEFGWDLKHVYGATETGPLITTSDAK 327
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
++ AD +R +K QG+ +G D+ VV E G V DG++ GEIV R +M Y
Sbjct: 328 RHFDEGAD-DRFAVKKTQGIGYLG-TDVRVV-DENGEDVAADGETIGEIVVRGNQVMDRY 384
Query: 297 LKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
E + + R +++ GD+ VV DG++ I+DR KD+IISGGENISS E+E L+
Sbjct: 385 WNKPEATEEAFSERLEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLF 444
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP-----TEEAIIEFCRARLPHYMAH 409
+ +++VA++ D+ WG+ P AFV + S P T E + F R R+ Y
Sbjct: 445 EHDVVSDVAVIPAPDERWGETPKAFVVPE---SGDPDDAGATPEQLKAFVRERVADYKTP 501
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
V ELP TATGKIQK+ LRE
Sbjct: 502 GEVEFVAELPTTATGKIQKYELRE 525
>gi|452848316|gb|EME50248.1| hypothetical protein DOTSEDRAFT_68953 [Dothistroma septosporum
NZE10]
Length = 594
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 162/464 (34%), Positives = 241/464 (51%), Gaps = 42/464 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP-- 62
RL ++ + H+E L+ VD + PL + P+ P +I D +
Sbjct: 128 RLKMDDITYIFDHAEVDLIIVDAEFRPLLDSFKQSHPN-----VPFIIDTDTDEDTGEFD 182
Query: 63 -----TVGHPNFK----WVQPESE---WDPM-ALNYTSGTTSSPKGVVHCHRGLFIITVS 109
+ H + W E+E D M A+ YTSGTTS PKGV + HR ++ T++
Sbjct: 183 QCVLEGMQHDDRNGGRGWAGLETEVPQEDSMIAIAYTSGTTSRPKGVEYTHRSAYLATLA 242
Query: 110 SLIDWRI------PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK++ P I+ ++K
Sbjct: 243 NVIESALNTAHPKAQRCHYLWTLPMFHAMGWTFPWAVTAVRGTHYCLRKIEYPYIWRLLK 302
Query: 164 HHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRT-ESLGFVVSHSYG 222
++H A V +L + P+ + L+ PV++ T ASPP+A L + E+ H YG
Sbjct: 303 EEHISHYNAAPTVNTLLLADPNAEKLEHPVRV-TVAASPPSAHLFESMETHNLRPVHVYG 361
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVH-----------PET 271
LTET G + W+ L E+ ARQG I V+ ET
Sbjct: 362 LTETYGPITKGYMMPLWDNLPTKEKYAKMARQGHGFITSLPARVIKTNQDDSGSWDASET 421
Query: 272 GMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKD 331
V+ +GQ GEIVF GY KD + ++GD+ V H DG ++I D
Sbjct: 422 VEDVEKNGQEIGEIVFIGNICAKGYYKDPAATRKLFAGGVQ-HSGDLAVWHPDGAIQILD 480
Query: 332 RSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPT 391
R+KD+IISGGENISS +E +L +P I E A VA +DK WG+ P AF+++K T
Sbjct: 481 RAKDIIISGGENISSVALEGLLMTHPDILEAACVAVQDKKWGEVPKAFITVKQGKKGGMT 540
Query: 392 EEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ II++ R +++ +M K V I DELPKT+TGK++K VLR+
Sbjct: 541 GDDIIQWARNQSQISRFMVPKEVEILDELPKTSTGKLRKNVLRD 584
>gi|395008538|ref|ZP_10392183.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, partial
[Acidovorax sp. CF316]
gi|394313432|gb|EJE50451.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, partial
[Acidovorax sp. CF316]
Length = 253
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 158/239 (66%), Gaps = 2/239 (0%)
Query: 199 GASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRT 258
G+ PPAA+L ++GF V H YG+TE +G VSC + W T +RARL+ARQGVR
Sbjct: 1 GSPPPAAILQAIAAMGFDVDHVYGITEVSGTPVSCVQQPGWATAPAADRARLQARQGVRA 60
Query: 259 IGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDI 318
L + V+HP+T V DG + GEI+ R ++M GYLK+ G++ WF+TGDI
Sbjct: 61 AALEQLRVLHPDTLQPVPADGVTAGEIMVRGNTVMKGYLKN-PGATAKAFAGGWFHTGDI 119
Query: 319 GVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCA 378
V+H DGY++I DRSKDVIISGGENISS EVE VL+ +PA+ A+VAQ D+ WG+ PCA
Sbjct: 120 AVLHPDGYVQITDRSKDVIISGGENISSVEVEDVLHRHPAVLLAAVVAQPDERWGEVPCA 179
Query: 379 FVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIVNA 437
FV LK E + E +I+FCR L + + V+ D LP+TATGKIQKF LREI +
Sbjct: 180 FVELKPEAVGSVSAEELIDFCRTHLARFKCPRQVVF-DLLPRTATGKIQKFRLREIAGS 237
>gi|358391754|gb|EHK41158.1| AMP-binding domain protein [Trichoderma atroviride IMI 206040]
Length = 567
Score = 237 bits (605), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 158/457 (34%), Positives = 240/457 (52%), Gaps = 38/457 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPK-PVLIHDDVSATSSPT 63
RL ++ + +E + VD++ L L LF PK P++I D AT
Sbjct: 113 RLKPDDIAYIFEFAEVDSIIVDHEFVGL----LDLFKERH--PKIPLIIDSDTDATEGQL 166
Query: 64 VG---------------HPNFKWV----QPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
G N W +E D +A+ +TSGTTS PKGVV+ +RG +
Sbjct: 167 CGPFDEAVLEGLNYDRSTGNTGWAGLHAHATNEDDMIAIPFTSGTTSRPKGVVYTNRGSY 226
Query: 105 IITVSSLIDWRIPN-QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
+ + ++I+ + N + +LWTLPMFH GW++ W + AV G N+CLRK+D P+I+ ++K
Sbjct: 227 LAAMGNIIESGLNNGRCKYLWTLPMFHAIGWTFPWAVVAVRGVNVCLRKIDYPLIWKLLK 286
Query: 164 HHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSYG 222
G+TH A V +L ++ + L + V++ T ASPP+ L + +L + H YG
Sbjct: 287 EQGITHFNAAPTVNTLLVAAKEAERLPQEVRV-TVAASPPSGHLFEQMTNLNLIPVHVYG 345
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKHD 278
+TET G + C +W+ L E+ ARQG I + +V P+ + V D
Sbjct: 346 MTETYGPLTKCYILPEWDNLPPHEKYAKMARQGHGFITSLPIRIVKPDQPNGALIDVAKD 405
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
G+ GEIVF Y KD E + + +GD+ V H DG +I DR+KD+II
Sbjct: 406 GKEIGEIVFFGNLCAKEYYKDPEATRKLF-EGGALRSGDLAVWHPDGSAQILDRAKDIII 464
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ES+L +P + E +V+ D WG+RP A+V++K K E +I +
Sbjct: 465 SGGENISSVALESMLVEHPDVLEAGVVSVPDSHWGERPKAYVTVK--EGKNLVGEDVINW 522
Query: 399 CR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + +M + V I ELPKT+TGKI+K LR+
Sbjct: 523 AKHQSNISKFMVPREVEIVKELPKTSTGKIKKNDLRQ 559
>gi|303316910|ref|XP_003068457.1| AMP-binding enzyme, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240108138|gb|EER26312.1| AMP-binding enzyme, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 575
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 241/458 (52%), Gaps = 38/458 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + ++ + HSE ++ VD + L L F T PV+I D AT
Sbjct: 116 RLKSEDIAYIFTHSEVDIIIVDQEYVHL----LDEF-RKTRPDFPVVIDTDTDATEGELS 170
Query: 65 GH---------------PNFKWVQPES----EWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G N W E+ E +AL YTSGTT+ PKGV + HRG ++
Sbjct: 171 GPFDASVLEGLQYDSQLGNHGWNGLETHAADEESLIALAYTSGTTARPKGVEYIHRGCYL 230
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
++++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D I+ ++
Sbjct: 231 AALANIIESGLNYHQGRCRYLWTLPMFHAMGWTFPWAITAVRGTHYCLRKIDYSQIWRLL 290
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSY 221
K +TH A V +L +S + L PV++ T ASPP L + SL H Y
Sbjct: 291 KEEKITHFNAAPTVNTILCNSKEAERLPSPVRV-TVAASPPTPHLFEQMLSLNLHPVHVY 349
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVKH 277
G+TET G + + +W+ L ++ + ARQG + + V+ E T + V+
Sbjct: 350 GMTETYGPITKGYYMPEWDNLPAKDKYQKMARQGHGFVTSLPVRVIKTEVPEGTVIDVER 409
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
+G+ GEIVF GY KD E + ++GD+ V H DG ++I DR+KD+I
Sbjct: 410 NGKEIGEIVFVGNICARGYYKDPEATKKLFA-GGVLHSGDLAVCHPDGAIQILDRAKDII 468
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +E++L +P I EV +VA D WG+RP AF+++ + K E +IE
Sbjct: 469 ISGGENISSVALEAMLATHPDILEVGIVAVADSHWGERPKAFITV--QPGKTLKGEDVIE 526
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + + +M + V + ELPKT+TGK++K VLRE
Sbjct: 527 WAKQTSGISRFMVPREVEVLAELPKTSTGKVKKNVLRE 564
>gi|119187611|ref|XP_001244412.1| hypothetical protein CIMG_03853 [Coccidioides immitis RS]
gi|392871131|gb|EAS32999.2| AMP-binding domain-containing protein [Coccidioides immitis RS]
Length = 575
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 160/458 (34%), Positives = 241/458 (52%), Gaps = 38/458 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + ++ + HSE ++ VD + L L F T PV+I D AT
Sbjct: 116 RLKSEDIAYIFTHSEVDIIIVDQEYVHL----LDEF-RKTRPDFPVVIDTDTDATEGELS 170
Query: 65 GH---------------PNFKWVQPES----EWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G N W E+ E +AL YTSGTT+ PKGV + HRG ++
Sbjct: 171 GPFDASVLEGLQYDSQLGNHGWNGLETHAADEESLIALAYTSGTTARPKGVEYIHRGCYL 230
Query: 106 ITVSSLIDWRI---PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVI 162
++++I+ + + +LWTLPMFH GW++ W + AV GT+ CLRK+D I+ ++
Sbjct: 231 AALANIIESGLNYHQGRCRYLWTLPMFHAMGWTFPWAITAVRGTHYCLRKIDYSQIWRLL 290
Query: 163 KHHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSY 221
K +TH A V +L +S + L PV++ T ASPP L + SL H Y
Sbjct: 291 KEEKITHFNAAPTVNTILCNSKEAERLPSPVRV-TVAASPPTPHLFEQMLSLNLHPVHVY 349
Query: 222 GLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVKH 277
G+TET G + + +W+ L ++ + ARQG + + V+ E T + V+
Sbjct: 350 GMTETYGPITKGYYMPEWDNLPAKDKYQKMARQGHGFVTSLPVRVIKTEVPEGTVIDVER 409
Query: 278 DGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVI 337
+G+ GEIVF GY KD E + ++GD+ V H DG ++I DR+KD+I
Sbjct: 410 NGKEIGEIVFVGNICARGYYKDPEATKKLFA-GGVLHSGDLAVCHPDGAIQILDRAKDII 468
Query: 338 ISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIE 397
ISGGENISS +E++L +P I EV +VA D WG+RP AF+++ + K E +IE
Sbjct: 469 ISGGENISSVALEAMLATHPDILEVGIVAVADSHWGERPKAFITV--QPGKTLKGEDVIE 526
Query: 398 FCR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + + +M + V + ELPKT+TGK++K VLRE
Sbjct: 527 WAKQTSGISRFMVPREVEVLAELPKTSTGKVKKNVLRE 564
>gi|406867771|gb|EKD20809.1| AMP-binding enzyme [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 574
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 141/371 (38%), Positives = 210/371 (56%), Gaps = 14/371 (3%)
Query: 72 VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI---PNQPVFLWTLPM 128
Q + E +AL +TSGTT+ PKGVV+ HRG ++ + ++I+ + + +LWTLPM
Sbjct: 198 AQADDENGTIALPFTSGTTAKPKGVVYTHRGAYLAAMGNVIESGLNYHEGRCGYLWTLPM 257
Query: 129 FHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKP 188
FH GW++ W + AV GT+ CLRK++ P+I+ ++K +TH A V +L +S +
Sbjct: 258 FHAMGWTFPWSVTAVRGTHYCLRKINYPLIWHLLKTENITHFNAAPTVNTLLCASKDAEK 317
Query: 189 LDRPVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTER 247
L +PV++ T ASPP A L + SL H YGLTET G + W TL E+
Sbjct: 318 LPKPVRV-TVAASPPTAHLFEQMSSLNLQPVHVYGLTETYGPITKGYHMPLWETLPPKEK 376
Query: 248 ARLKARQGVRTIGLADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
ARQG I + ++ E + V DG+ GEIVF GYL D E +
Sbjct: 377 YARMARQGHGFITGLPIRIIKTEQPEGVLIDVAKDGKEIGEIVFFGNICAKGYLDDSEAT 436
Query: 304 SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVA 363
++GD+ V H DG +I DR+KD+IISGGENISS +ES+L +P + E
Sbjct: 437 RKLFAGGA-LHSGDLAVWHEDGSAQILDRAKDIIISGGENISSVALESMLVQHPDVLEAG 495
Query: 364 LVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKT 421
+V+ D WG+RP AF+++ + + E +IE+ + + + +M + V + +ELPKT
Sbjct: 496 VVSVADSHWGERPKAFITV--QEGRTLRGEDLIEWSKHESAISKFMVPREVEVVNELPKT 553
Query: 422 ATGKIQKFVLR 432
+TGKI+K VLR
Sbjct: 554 STGKIKKNVLR 564
>gi|378729291|gb|EHY55750.1| fatty-acyl-CoA synthase [Exophiala dermatitidis NIH/UT8656]
Length = 598
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 214/373 (57%), Gaps = 14/373 (3%)
Query: 72 VQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID----WRIPNQPVFLWTLP 127
Q E+ AL YTSGTT+ PKGV + HRG ++ ++++++ + + +LWTLP
Sbjct: 220 AQTADEFAVTALAYTSGTTARPKGVEYTHRGGYLAALANVVESGLSYHDGERCKYLWTLP 279
Query: 128 MFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTK 187
MFH GW++ W + AV GT+ CLRK+D P I+ ++K G+TH C A V +L + +
Sbjct: 280 MFHAMGWTFPWAVTAVRGTHYCLRKIDYPEIWRLLKEEGITHYCAAPTVNTLLCADSNAA 339
Query: 188 PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTER 247
L +PV++ + + P A + + +L H YGLTET G + +W+ L + +
Sbjct: 340 KLAQPVRVTVAASPPTAHLFEQMTNLNLRPVHVYGLTETYGPITKGYILPEWDNLPNVKD 399
Query: 248 ARLK-ARQG---VRTIGLADMDVVHPE-TGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEG 302
K ARQG V ++ + + PE T + V+ +G+ GEIVF GY KD E
Sbjct: 400 KYAKMARQGHGIVTSLPVRVIKTDLPEGTIVDVEKNGKEIGEIVFVGNLCARGYYKD-EA 458
Query: 303 SSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEV 362
++ + ++GD+ V H DG ++I DR+KD+IISGGENISS +ES+ +P I E
Sbjct: 459 ATRKLFAGGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALESIFVTHPDILEC 518
Query: 363 ALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRAR--LPHYMAHKSVIIEDELPK 420
+ A D WG+RP AF+++K K T E +I++ + + +M + V I ELPK
Sbjct: 519 GVAAVSDSHWGERPKAFITIK--PGSKVTGEDVIKWAKDHPGISRFMVPREVEIVPELPK 576
Query: 421 TATGKIQKFVLRE 433
T+TGKI+K +LR+
Sbjct: 577 TSTGKIRKNILRD 589
>gi|448561330|ref|ZP_21634682.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
gi|445721562|gb|ELZ73230.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
Length = 540
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 215/408 (52%), Gaps = 24/408 (5%)
Query: 46 LPKPVLIHDDVSATSSPTVGH---------PNFKWVQPE-SEWDPMALNYTSGTTSSPKG 95
+P + + +D + T G + + +PE E D + +NYTSGTT PKG
Sbjct: 124 IPTEIFVTNDPEKAAESTDGEWLDFDELVAESTDYERPEMDEDDIVTINYTSGTTGDPKG 183
Query: 96 VVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDV 155
V HR I + I + V+LWTLPMFH NGW + + + G ++C R VD
Sbjct: 184 VCRTHRAETIHAYLVSMHQDIADDDVYLWTLPMFHVNGWGHIYAITGHGAKHVCTRGVDA 243
Query: 156 PIIYSVIKHHGVTHICGALVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRT 210
+ I+ V+++C A VLN+L + PV+ T+GA+PP A +
Sbjct: 244 ETVLDAIRDEDVSYLCAAPTVLNILMKHYREAGGVETTGASPVRAATAGAAPPEATIRTV 303
Query: 211 ES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP 269
E G+ + H YG TET G +++ + ++ T D +R +K +QG+ +G D+ VV
Sbjct: 304 EDEFGWRLMHVYGATET-GPLITTSEAGRYLTDGD-DRFGVKKKQGIGYLG-TDVRVVD- 359
Query: 270 ETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYL 327
E G V D QS GEIV +M Y E + + R +++ GD+ VV +G++
Sbjct: 360 EDGTDVPRDDQSIGEIVVAGNQVMEKYWNKPEETEEAFSARLEGYYHMGDLAVVDENGFI 419
Query: 328 EIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELS 387
I+DR KD+IISGGENISS E+E L+ + A+ +VA++ WG+ P AFV
Sbjct: 420 SIQDRKKDIIISGGENISSIELEDTLFDHDAVGDVAVIPVPSDEWGESPKAFVVPTSGDP 479
Query: 388 KKP--TEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
P T EA+IEFCR R+ Y K + ELPKTATGKIQK+ LRE
Sbjct: 480 DAPGVTAEALIEFCRERIATYKVPKEIEFVAELPKTATGKIQKYELRE 527
>gi|448429182|ref|ZP_21584589.1| AMP-dependent synthetase and ligase [Halorubrum terrestre JCM
10247]
gi|445675269|gb|ELZ27803.1| AMP-dependent synthetase and ligase [Halorubrum terrestre JCM
10247]
Length = 538
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 205/377 (54%), Gaps = 21/377 (5%)
Query: 71 WVQPESEWDP-MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMF 129
+ +PE + D + +NYTSGTT PKGV HR + I I + V+LWTLPMF
Sbjct: 156 YERPEMDEDEVITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVYLWTLPMF 215
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML----SSSPS 185
H NGW + + + G ++C R VDV + I+ V++ C A VLNML +
Sbjct: 216 HVNGWGHIYAITGAGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGDHHAEHGG 275
Query: 186 TKPLDRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLA 243
D V++ T+GA+PP A +RT E G+ + H YG TET + + K ++ A
Sbjct: 276 ATTGDNDVRVATAGAAPPEAT-IRTVEEEFGWDLKHVYGATETGPLITTSDAKRHFDEGA 334
Query: 244 DTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
D +R +K QG+ +G D+ VV E G V DG++ GEIV R +M Y E +
Sbjct: 335 D-DRFAVKKTQGIGYLG-TDVRVV-DENGEDVAADGETIGEIVVRGNQVMDRYWNKPEAT 391
Query: 304 --SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
+ R +++ GD+ VV DG++ I+DR KD+IISGGENISS E+E L+ + +++
Sbjct: 392 EEAFSERLEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDVVSD 451
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKP-----TEEAIIEFCRARLPHYMAHKSVIIED 416
VA++ D+ WG+ P AFV + S P T E + F R R+ Y V
Sbjct: 452 VAVIPAPDERWGETPKAFVVPE---SGDPDDAGATPEQLKAFVRERVADYKTPGEVEFVA 508
Query: 417 ELPKTATGKIQKFVLRE 433
ELP TATGKIQK+ LRE
Sbjct: 509 ELPTTATGKIQKYELRE 525
>gi|448666703|ref|ZP_21685348.1| medium-chain acyl-CoA ligase [Haloarcula amylolytica JCM 13557]
gi|445771834|gb|EMA22890.1| medium-chain acyl-CoA ligase [Haloarcula amylolytica JCM 13557]
Length = 539
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 221/438 (50%), Gaps = 27/438 (6%)
Query: 14 LLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS------SPTVGHP 67
+L +E ++ DY+ A + P +P + + +D A +
Sbjct: 98 ILSDAEVDAVYADYEY------ADKIEPIRDEVPTDIFVTNDTDAVDGDWESFDEIIEEA 151
Query: 68 NFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTL 126
+ +PE E D + +NYTSGTT PKGV HR + + I + V+LWTL
Sbjct: 152 GTDYERPEMDEDDLITINYTSGTTGDPKGVCRTHRTETLHAYIVALHQEISDDDVYLWTL 211
Query: 127 PMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPST 186
PMFH NGW + + + +G ++C R VD I+ ++ V+++CGA VLN+L+
Sbjct: 212 PMFHVNGWGHIFSVTGMGAKHVCTRGVDAEGIFDAVRTEDVSYLCGAPTVLNILADRYED 271
Query: 187 KPLD------RPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCAWKSQW 239
+ V+I T+G++PP AV+ E G+ + H YG TET V + + +
Sbjct: 272 HDGEIETTGANDVRIATAGSAPPEAVIRTVEDDFGWYLKHVYGATETGPLVTTSDARRFF 331
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKD 299
+D R +K RQG+ +G D+ VV E G V HD ++ GE+V R +M Y
Sbjct: 332 EDGSDA-RFSVKKRQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNK 388
Query: 300 QEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
E + D +++ GD+ V DG + I+DR KD+IISGGENISS E+E LY +
Sbjct: 389 PEQTEEAFSDRVEGYYHMGDLATVDEDGMIAIRDRKKDIIISGGENISSIELEDTLYEHD 448
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIE 415
A+++VA++ WG+ P AFV P T E + F R L Y + V
Sbjct: 449 AVSDVAVIPAPSDEWGETPKAFVVPNSGDPDNPGVTAEDLRNFTREELATYKVVRRVEFV 508
Query: 416 DELPKTATGKIQKFVLRE 433
++LP TATGK+QK+ LRE
Sbjct: 509 EQLPTTATGKVQKYELRE 526
>gi|448480530|ref|ZP_21604603.1| AMP-dependent synthetase and ligase [Halorubrum arcis JCM 13916]
gi|445822071|gb|EMA71845.1| AMP-dependent synthetase and ligase [Halorubrum arcis JCM 13916]
Length = 538
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 144/377 (38%), Positives = 205/377 (54%), Gaps = 21/377 (5%)
Query: 71 WVQPESEWDP-MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMF 129
+ +PE + D + +NYTSGTT PKGV HR + I I + V+LWTLPMF
Sbjct: 156 YERPEMDEDEVITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVYLWTLPMF 215
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML----SSSPS 185
H NGW + + + G ++C R VDV + I+ V++ C A VLNML +
Sbjct: 216 HVNGWGHIYAITGAGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGDHHAEHGG 275
Query: 186 TKPLDRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLA 243
D V++ T+GA+PP A +RT E G+ + H YG TET + + K ++ A
Sbjct: 276 ATTGDNDVRVATAGAAPPEAT-IRTVEEEFGWDLKHVYGATETGPLITTSDAKRHFDEGA 334
Query: 244 DTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
D +R +K QG+ +G D+ VV E G V DG++ GEIV R +M Y E +
Sbjct: 335 D-DRFAVKKTQGIGYLG-TDVRVVD-ENGEDVAADGETIGEIVVRGNQVMDRYWNKPEAT 391
Query: 304 --SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
+ R +++ GD+ VV DG++ I+DR KD+IISGGENISS E+E L+ + +++
Sbjct: 392 EEAFSERLEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLFEHDVVSD 451
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKP-----TEEAIIEFCRARLPHYMAHKSVIIED 416
VA++ D+ WG+ P AFV + S P T E + F R R+ Y V
Sbjct: 452 VAVIPAPDERWGETPKAFVVPE---SGXPDDAGATPEQLKAFVRERVADYKTPGEVEFVA 508
Query: 417 ELPKTATGKIQKFVLRE 433
ELP TATGKIQK+ LRE
Sbjct: 509 ELPTTATGKIQKYELRE 525
>gi|452208024|ref|YP_007488146.1| acyl-CoA synthetase [Natronomonas moolapensis 8.8.11]
gi|452084124|emb|CCQ37457.1| acyl-CoA synthetase [Natronomonas moolapensis 8.8.11]
Length = 537
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 149/445 (33%), Positives = 226/445 (50%), Gaps = 25/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS---- 60
RL + + +L+ +E + + DY+ + A P+ V I +D AT
Sbjct: 89 RLLPEDLEYILNDAEVRAVIADYELAEKVEAVRDDVPTE------VFISNDADATDGEWE 142
Query: 61 --SPTVGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ + + +PE E D + +NYTSGTT PKGV+ HR I I I
Sbjct: 143 DFEAVIDGVDPVYDEPEMDEADVITINYTSGTTGDPKGVMRTHRTETIHAYLISIHQDIT 202
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
+ +LWTLPMFH NGW + + + +G +C R +D I I V+++C A VL
Sbjct: 203 DDDTYLWTLPMFHVNGWGHIYAVTGMGAKQVCTRGIDAEWILETINEEDVSYLCAAPTVL 262
Query: 178 NML----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVS 232
NML + + D V++ T+G++PP A + E G+ + H YG TET + S
Sbjct: 263 NMLLDYYENHDVSTSGDADVRVATAGSAPPEATIRTVEDEFGWYLKHVYGATETGPLITS 322
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
+ + ++ +R +K QG+ +G ++ VV E G V DGQS GEIV R +
Sbjct: 323 SDARRYFEDDSE-DRFAVKKTQGIGYLG-TEVRVVD-EDGNDVAEDGQSIGEIVVRGNQV 379
Query: 293 MLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
M YL E + D +++ GD+ V +G ++I+DR KD+IISGGENISS E+E
Sbjct: 380 MDRYLGKPEATEEAFNDRVEGYYHMGDLATVDENGMVQIQDRKKDIIISGGENISSIELE 439
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMA 408
L+ +P +++VA++ WG+ P AFV P +E+ + +F R L Y
Sbjct: 440 DTLFEHPEVSDVAIIPAPSDEWGETPKAFVVPASGDPDAPGVSEDELTKFTRENLASYKM 499
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
+ V ELP TATGK+QK+ LRE
Sbjct: 500 VRRVEFVAELPTTATGKVQKYELRE 524
>gi|302695743|ref|XP_003037550.1| hypothetical protein SCHCODRAFT_49211 [Schizophyllum commune H4-8]
gi|300111247|gb|EFJ02648.1| hypothetical protein SCHCODRAFT_49211 [Schizophyllum commune H4-8]
Length = 580
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 158/473 (33%), Positives = 239/473 (50%), Gaps = 50/473 (10%)
Query: 2 VIQRLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSS 61
V RL V ++ HS S+ + VD++ + L L ++L P ++ D
Sbjct: 116 VNTRLRPDDVKYIIEHSGSRFILVDHEFTHL-LKGINL---------PTIVCHDTGRAGD 165
Query: 62 P-----TVGHPNFK---WVQPESEWDPMA---LNYTSGTTSSPKGVVHCHRGLFIITVSS 110
P T G + W+ + E D A L YTSGTT PKGV+ +RG ++ +++
Sbjct: 166 PYEDFLTSGRAFSRERGWLGLDVEADENAAAVLCYTSGTTGRPKGVLTTYRGSYLAAIAN 225
Query: 111 LIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDV-PIIYSVIKHHGVTH 169
++ + V+LW +P+FH GW Y+W A T + LR PI ++ TH
Sbjct: 226 AVEAEMNYDSVYLWIVPLFHAAGWCYAWSAAFAFSTQVTLRTAAPGPIWQRLLAPPSATH 285
Query: 170 ICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGF 229
C A V L ++ + + V+ + +G++P ++++ ESLG V H YGLTET G
Sbjct: 286 YCAAPTVQISLVNATEARRVAHSVRTIVAGSAPTSSLIASLESLGIRVVHVYGLTETYGP 345
Query: 230 VVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG--------MSVKHDGQS 281
V + W L+ ERA+L ARQG + VV+P + V DG++
Sbjct: 346 FVRSYARPHWKDLSLEERAKLMARQGHAFATALEARVVYPPKDGESDDGELVDVPKDGKT 405
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGG 341
GEIV R +M YL D + + R N F TGD+ V DG +++ DRSKD+IISGG
Sbjct: 406 IGEIVTRGNIVMKEYLNDPKATRKAFRGNH-FNTGDLAVWFEDGSIQVMDRSKDIIISGG 464
Query: 342 ENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLK------WEL--------- 386
EN SS +E L +PA+ EV+++A+ WG+RP AFV L+ W
Sbjct: 465 ENASSLAIEQELATHPALQEVSVIARTHPKWGERPMAFVILRPGARKQWGADCGAKGKDT 524
Query: 387 --SKKPT--EEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLREIV 435
++P+ E + + + RLP + + V + DELPKT+TGKIQK LR++V
Sbjct: 525 NGKQQPSAFERELKAYAKGRLPGFACPEWVEVVDELPKTSTGKIQKHELRKVV 577
>gi|55377684|ref|YP_135534.1| medium-chain acyl-CoA ligase [Haloarcula marismortui ATCC 43049]
gi|448659233|ref|ZP_21683201.1| medium-chain acyl-CoA ligase [Haloarcula californiae ATCC 33799]
gi|55230409|gb|AAV45828.1| medium-chain acyl-CoA ligase [Haloarcula marismortui ATCC 43049]
gi|445760735|gb|EMA11992.1| medium-chain acyl-CoA ligase [Haloarcula californiae ATCC 33799]
Length = 539
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 147/438 (33%), Positives = 224/438 (51%), Gaps = 27/438 (6%)
Query: 14 LLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS------SPTVGHP 67
+L +E ++ DY+ A + P +P + + +D A +
Sbjct: 98 ILSDAEVDAVYADYEY------ADKIEPIRDEVPTDIFVTNDTDAVDGDWESFDEIIEEA 151
Query: 68 NFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTL 126
+ +PE E D + +NYTSGTT PKGV HR + + I + V+LWTL
Sbjct: 152 GTDYERPEMDEDDLITINYTSGTTGDPKGVCRTHRTETLHAYIVALHQEISDDDVYLWTL 211
Query: 127 PMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPST 186
PMFH NGW + + + +G ++C R VD I+ ++ V+++CGA VLN+L+ +
Sbjct: 212 PMFHVNGWGHIFSVTGMGAKHVCTRGVDAEGIFDAVRTEDVSYLCGAPTVLNILADRYAA 271
Query: 187 KPLD------RPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCAWKSQW 239
+ V+I T+G++PP AV+ E G+ + H YG TET G +V+ + ++
Sbjct: 272 HDGEIETTGANDVRIATAGSAPPEAVIRTVEDDFGWYLKHVYGATET-GPLVTTSDARRF 330
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKD 299
R +K RQG+ +G D+ VV E G V HD ++ GE+V R +M Y
Sbjct: 331 FEDGSNARFSVKKRQGIGYLG-TDVRVVD-EDGNDVPHDDETLGEVVVRGNQVMDRYWNK 388
Query: 300 QEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
E + D +++ GD+ V DG + I+DR KD+IISGGENISS E+E LY +
Sbjct: 389 PEQTEEAFSDRVEGYYHMGDLATVDEDGMVAIRDRKKDIIISGGENISSIELEDTLYEHD 448
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIE 415
A+++VA++ WG+ P AFV P T E + F R +L Y + V
Sbjct: 449 AVSDVAVIPAPSDEWGETPKAFVVPNSGDPDNPGVTAEDLRTFTREQLATYKVVRRVEFV 508
Query: 416 DELPKTATGKIQKFVLRE 433
+ELP TATGK+QK+ LRE
Sbjct: 509 EELPTTATGKVQKYELRE 526
>gi|429856406|gb|ELA31315.1| amp-binding domain-containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 578
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 214/367 (58%), Gaps = 17/367 (4%)
Query: 79 DPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP-----VFLWTLPMFHENG 133
D +A+ +TSGTTS PKGVV+ HRG ++ + ++I+ + N P +LWTLP+FH G
Sbjct: 209 DMLAIPFTSGTTSRPKGVVYTHRGAYLAALGNVIESGL-NSPDGRRCKYLWTLPLFHACG 267
Query: 134 WSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPV 193
W++ W + V GT+ LRK+D P+I+ ++K ++H A V +L S+ + L +P
Sbjct: 268 WTFPWAVTMVRGTHYTLRKIDYPLIWKLLKEEEISHFNAAPTVNTLLCSAKEAEELPKPC 327
Query: 194 KILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKA 252
++ T ASPP+ L + +L + H YG+TET G + W++L E+ A
Sbjct: 328 RV-TVAASPPSGYLFEQMTNLNLIPVHVYGMTETYGPITKGYHMPSWDSLPPNEKYAKMA 386
Query: 253 RQGVRTIGLADMDVV---HPETGM-SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMR 308
RQG + + V+ PE + V DG+ GEI+F+ Y KD E +
Sbjct: 387 RQGHGFLTSLPIRVIKQDQPEGVLIDVMKDGKEIGEIIFKGNICCKEYYKDPEATKKLFA 446
Query: 309 DNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQR 368
+ ++GD+ V+H +G +I DR+KD+IISGGENISS +E +L +P + E A+VA
Sbjct: 447 -GGFLHSGDLAVMHEEGAAQILDRAKDIIISGGENISSVALEGMLVQHPDLLEAAVVAIP 505
Query: 369 DKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTATGKI 426
D WG+RP A+V++K S +P E +I + + + + +MA + V + DELPKT+TGK+
Sbjct: 506 DSHWGERPKAYVTVKEGKSLQP--EDLISWAKHQSNISKFMAPREVEVVDELPKTSTGKL 563
Query: 427 QKFVLRE 433
+K VLRE
Sbjct: 564 KKNVLRE 570
>gi|384491611|gb|EIE82807.1| hypothetical protein RO3G_07512 [Rhizopus delemar RA 99-880]
Length = 668
Score = 236 bits (601), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/364 (38%), Positives = 199/364 (54%), Gaps = 40/364 (10%)
Query: 78 WDPMAL----------NYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLP 127
WD M L NYTSG+T PKGV+ +RG+++ + +I + V+LWT+P
Sbjct: 193 WDEMPLLNDENAVFSINYTSGSTGRPKGVMASYRGVYLNALGMIIQGALSTNTVYLWTVP 252
Query: 128 MFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTK 187
MFH NGWS+ W + AVG T + L K+D +I+ ++ H +TH GA V N L +
Sbjct: 253 MFHCNGWSFPWALVAVGSTQVMLNKIDYSLIWDLLIKHNITHYNGAPTVQNELCNHKKAV 312
Query: 188 PLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVV---SCAWKSQWNTLAD 244
L+ PV++L S YGLTET G V A S++N +
Sbjct: 313 RLNHPVRVL---------------------SGVYGLTETYGPAVLGYDVAILSEYN---E 348
Query: 245 TERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
E+ + ARQG TI ++ V++ ++G+ V +G+ GE+ F +MLGY D E +
Sbjct: 349 EEQQKRLARQGYNTIISDELRVLNKDSGLDVTANGKEIGEVCFTGNLVMLGYYNDPEETE 408
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
+ F++GD+ V H DG +EI DRSKD+I+SGGENISS EVE+V+ + E A+
Sbjct: 409 KAFK-GGVFWSGDLAVRHPDGTIEILDRSKDIIVSGGENISSIEVENVVVQLEEVMECAI 467
Query: 365 VAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATG 424
V++ D WG+RP AFV LK K T + I + CR L Y + VI ELPKT+T
Sbjct: 468 VSEPDDKWGERPVAFVVLK--AGKTLTADIIFDHCRKLLAGYKCPEKVIFIKELPKTSTV 525
Query: 425 KIQK 428
IQ+
Sbjct: 526 LIQE 529
>gi|435847769|ref|YP_007310019.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
gi|433674037|gb|AGB38229.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
Length = 547
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/374 (35%), Positives = 207/374 (55%), Gaps = 13/374 (3%)
Query: 70 KWVQPESEWDPM-ALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPM 128
++ +PE D + +NYTSGTT PKGV HRG I + + + ++LWTLPM
Sbjct: 164 EYDRPEMHEDEIITINYTSGTTGDPKGVCRTHRGETIHAYLVAVHQNLTDDDIYLWTLPM 223
Query: 129 FHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKP 188
FH NGW + + + +G ++C R VD ++ I+ V+++CGA VLNML
Sbjct: 224 FHVNGWGHIYAVTGMGAKHVCTRGVDAEWLFETIREEDVSYLCGAPTVLNMLIDYYGDNA 283
Query: 189 LD----RPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLA 243
++ V+I T+G++PP A L E G+ + H YG TET + + + ++ +
Sbjct: 284 VETTGANDVRIATAGSAPPEATLRTVEDEFGWYLKHVYGATETGPLITTSDARRHFDDGS 343
Query: 244 DTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
D R +K RQG+ +G ++ VV E G V DG++ GE+V R +M Y E +
Sbjct: 344 DG-RFAVKKRQGLGFMG-TEVRVVD-EDGEDVSRDGETLGEVVVRGNQVMERYWNKPEET 400
Query: 304 SLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
D +++TGD+ + +G + I+DR KD+IISGGENISS E+E L+ +P +++
Sbjct: 401 EEAFSDRVEGYYHTGDLATIDENGMIAIQDRKKDIIISGGENISSIELEDTLFDHPEVSD 460
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIEDELP 419
A++ + WG+ P AFV + +P +E+ ++ F R L +Y + + ELP
Sbjct: 461 AAVIPSPSEQWGETPKAFVVPESGDPDQPGVSEDGLVAFTREHLANYKTVQRIEFVAELP 520
Query: 420 KTATGKIQKFVLRE 433
TATGK+QK+ LRE
Sbjct: 521 TTATGKVQKYELRE 534
>gi|326470920|gb|EGD94929.1| hypothetical protein TESG_02427 [Trichophyton tonsurans CBS 112818]
Length = 574
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 211/371 (56%), Gaps = 14/371 (3%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPV---FLWTLPMF 129
Q E +AL YTSGTT+ PKGV + HRG ++ + ++I+ + Q +LW LPMF
Sbjct: 199 QAADEESLIALAYTSGTTARPKGVEYIHRGCYLAALGNIIESGLNFQQGRCGYLWILPMF 258
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPL 189
H GW++ W + AV GT+ CLRK+D P I+ ++K +TH A V +L ++ + L
Sbjct: 259 HAMGWTFPWSITAVRGTHYCLRKIDYPEIWRMLKQENITHFNAAPTVNTLLCAAKEAERL 318
Query: 190 DRPVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERA 248
RPV++ T ASPP A L + S+ H YGLTET G + W+T+ E+
Sbjct: 319 SRPVRV-TVAASPPTAHLFEQMTSVNLHPVHVYGLTETYGPITKAYHMPLWDTIPLKEKY 377
Query: 249 RLKARQGVRTIGLADMDVVH---PE-TGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
+ ARQG + + V+ PE T + V+ DG+ GEIVF GY KD +
Sbjct: 378 KRMARQGHGFLTSMPVRVIKTDVPEGTIIDVRKDGKEIGEIVFTGNICARGYYKDTAATD 437
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
++GD+ V H DG ++I DR+KD+IISGGENISS +E++L +P I E +
Sbjct: 438 KLFA-GGVLHSGDLAVWHPDGAVQILDRAKDIIISGGENISSVALEAMLATHPDILEAGV 496
Query: 365 VAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTA 422
VA D WG+RP A+V++ + K+ T II + + + + +M + V I ELPKT+
Sbjct: 497 VAVSDVHWGERPKAYVTI--QAGKQVTGLEIIAWAKNSSGISRFMVPREVEIVLELPKTS 554
Query: 423 TGKIQKFVLRE 433
TGKI+K VLRE
Sbjct: 555 TGKIKKNVLRE 565
>gi|433589711|ref|YP_007279207.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natrinema
pellirubrum DSM 15624]
gi|448332695|ref|ZP_21521924.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
gi|433304491|gb|AGB30303.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natrinema
pellirubrum DSM 15624]
gi|445625670|gb|ELY79025.1| AMP-dependent synthetase and ligase [Natrinema pellirubrum DSM
15624]
Length = 537
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 144/440 (32%), Positives = 225/440 (51%), Gaps = 15/440 (3%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL +L + ++ DY+ + A P+ T + + + +
Sbjct: 89 RLTPDDFKYILSDAGVDAIYADYEYADRIEAIRDDVPTETFITNDADAVEGDWESFDAVL 148
Query: 65 GHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFL 123
++ +PE SE + + +NYTSGTT PKGV HR I + I + +L
Sbjct: 149 EDAGPEYDRPEMSEDEIITINYTSGTTGDPKGVCRTHRCETIHAYLLVGHQEITDDDTYL 208
Query: 124 WTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML--- 180
WTLPMFH NGW + + + +G T++C R VD I+ ++ V+++CGA VLNML
Sbjct: 209 WTLPMFHANGWGHIFAVTGIGATHVCTRGVDAAEIFETVRAEDVSYMCGAPTVLNMLIDY 268
Query: 181 --SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKS 237
P T + V++ T+G++PP A + E G+ + H YG TET + + +
Sbjct: 269 YRDHEPETTG-EADVRLATAGSAPPEATIRTVEDEFGWYLKHVYGATETGPLITTSDARR 327
Query: 238 QWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYL 297
+ +D +R R+K RQG+ +G ++ VV E G V D ++ GE+V R IM Y
Sbjct: 328 HFQADSD-DRFRIKKRQGLAYLG-TEIRVVD-EDGADVPRDDETLGEVVVRGNQIMEKYW 384
Query: 298 KDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
E + D +++TGD+ V +G + I+DR KD+IISGGENISS E+E L+
Sbjct: 385 NKPEATEEAFTDRVEGYYHTGDLATVDENGMIAIQDRKKDIIISGGENISSIELEDTLFD 444
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVI 413
+ A+ + A++ WG+ P AFV P + E + EF R +L Y A + +
Sbjct: 445 HEAVADAAVIPAPSDEWGETPKAFVVPSNGDPNDPPVSAEELTEFTREQLAGYKAVRRIE 504
Query: 414 IEDELPKTATGKIQKFVLRE 433
+ELP TATGK+QK+ LR+
Sbjct: 505 YVNELPTTATGKVQKYELRQ 524
>gi|312199101|ref|YP_004019162.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
gi|311230437|gb|ADP83292.1| AMP-dependent synthetase and ligase [Frankia sp. EuI1c]
Length = 515
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 157/437 (35%), Positives = 234/437 (53%), Gaps = 36/437 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL VS ++ HS + +L VD + + + + K ++ D V+
Sbjct: 94 RLTAAEVSYIVEHSGASVLLVDPELDDVL---------SGVKAKERIVLDGVADAELFAE 144
Query: 65 GHPNFKWVQPESEWDPMA-LNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFL 123
P V E + D + +NYTSGTT+ PKGV HR ++ VS + ++ V L
Sbjct: 145 AAPGATPVAWEPDEDAVCTINYTSGTTARPKGVRLTHRNNWLNAVSFGWHTTVTDRDVIL 204
Query: 124 WTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA-LVVLNMLSS 182
TLPMFH NGW + + +GGT++ +RK+D I S ++ GVT +CGA VV ++L +
Sbjct: 205 HTLPMFHVNGWGMPFAVTGMGGTHVAIRKIDGEDILSRVEREGVTLLCGAPAVVASILDA 264
Query: 183 SPSTKPLDRP------VKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
+ + +P V+I+ +GA PP+AV+ R E LG+ YGLTE A +
Sbjct: 265 AAARLEAGQPVPGRDTVRIVVAGAPPPSAVVARVEELLGWEFIQIYGLTEAAPLLTINRS 324
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+++W+ LA ER+RL A+ GV P G+ ++ D GE++ RS + G
Sbjct: 325 RAEWDGLAVDERSRLLAQAGV------------PALGVRLRLD--PSGEVMARSNHVFDG 370
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y + E ++L + D WF+TGD G + L I DR KDVII+GGEN+SS EVE LY+
Sbjct: 371 YWEQPEQTALAIEDG-WFHTGDGGTLDG-ATLAITDRKKDVIITGGENVSSIEVEDCLYL 428
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+ ++ E A++ D WG+ A V L+ +P E +I FCR R+ HY SV +
Sbjct: 429 HKSVAEAAVIGVPDPKWGETVKALVVLRPGERVEPAE--LIAFCRDRMAHYKCPTSVELR 486
Query: 416 DELPKTATGKIQKFVLR 432
D L +TATGK+QKF LR
Sbjct: 487 DALERTATGKLQKFKLR 503
>gi|320038318|gb|EFW20254.1| hypothetical protein CPSG_03429 [Coccidioides posadasii str.
Silveira]
Length = 544
Score = 235 bits (599), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 153/443 (34%), Positives = 235/443 (53%), Gaps = 39/443 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + ++ + HSE ++ VD Q P + L ++ L
Sbjct: 116 RLKSEDIAYIFTHSEVDIIIVD-QDGPFDASVLEGLQYDSQLG----------------- 157
Query: 65 GHPNFKWVQPES----EWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI---P 117
N W E+ E +AL YTSGTT+ PKGV + HRG ++ ++++I+ +
Sbjct: 158 ---NHGWNGLETHAADEESLIALAYTSGTTARPKGVEYIHRGCYLAGLANIIESGLNYHQ 214
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
+ +LWTLPMFH GW++ W + AV GT+ CLRK+D I+ ++K +TH A V
Sbjct: 215 GRCRYLWTLPMFHAMGWTFPWAITAVRGTHYCLRKIDYSQIWRLLKEEKITHFNAAPTVN 274
Query: 178 NMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWK 236
+L +S + L PV++ T ASPP L + SL H YG+TET G + +
Sbjct: 275 TILCNSKEAERLPSPVRV-TVAASPPTPHLFEQMLSLNLHPVHVYGMTETYGPITKGYYM 333
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPE----TGMSVKHDGQSQGEIVFRSGSI 292
+W+ L ++ + ARQG + + V+ E T + V+ +G+ GEIVF
Sbjct: 334 PEWDNLPAKDKYQKMARQGHGFVTSLPVRVIKTEVPEGTVIDVERNGKEIGEIVFVGNIC 393
Query: 293 MLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESV 352
GY KD E + ++GD+ V H DG ++I DR+KD+IISGGENISS +E++
Sbjct: 394 ARGYYKDPEATKKLF-AGGVLHSGDLAVCHPDGAIQILDRAKDIIISGGENISSVALEAM 452
Query: 353 LYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHK 410
L +P I EV +VA D WG+RP AF+++ + K E +IE+ + + + +M +
Sbjct: 453 LATHPDILEVGIVAVADSHWGERPKAFITV--QPGKTLKGEDVIEWAKQTSGISRFMVPR 510
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
V + ELPKT+TGK++K VLRE
Sbjct: 511 EVEVLAELPKTSTGKVKKNVLRE 533
>gi|448319894|ref|ZP_21509382.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
gi|445606300|gb|ELY60204.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
Length = 540
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 229/445 (51%), Gaps = 20/445 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT---SS 61
RL + +L+ + + DY+ + A L P+ T + +D
Sbjct: 89 RLTPDDYAYMLNDAGVDAVVADYEYAHKIDAVLDEVPTETFIATDADALEDCDGEWLDFE 148
Query: 62 PTVGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP 120
+ + + +PE SE D + +NYTSGTT PKGV+ HR + I I +
Sbjct: 149 ELIAEADADYDRPEMSEDDVITINYTSGTTGDPKGVMRTHRTESLHAQLVTIHHEISDDD 208
Query: 121 VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML 180
V+LWTLPMFH NGW + + + +G ++C R D I+ V+ +C A VL +
Sbjct: 209 VYLWTLPMFHVNGWGHIYAITGMGAKHVCTRGADAEANLRQIREEDVSFLCCAPTVLTLF 268
Query: 181 ------SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSC 233
+ P+T D P+++ +GA+PP +++ E+ G+ YG TET + +
Sbjct: 269 EEYLEEADVPTTG--DAPMRVTAAGAAPPESIIETVETEFGWHFRQLYGATETGPLIGTS 326
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
A + + ++ ER LK RQG+ + +++VV + G V D ++ GEIV R +M
Sbjct: 327 ATRRLIDEESE-ERFALKKRQGIAPLA-TEVEVVD-DDGTEVPWDDETIGEIVVRGNQVM 383
Query: 294 LGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
GY + E + D WF+TGD+ VV+ DG + I+DR KD+I+SGGENISS E+E
Sbjct: 384 DGYWEKPEETEEAFDDKREGWFHTGDLAVVNEDGLMAIQDRKKDIIVSGGENISSIELED 443
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAH 409
L+ +P + +VA++ + WG+ P AFV + P T + + + R RL Y
Sbjct: 444 TLFDHPDVADVAIIPAPSEKWGETPKAFVVPANGDPENPPVTADDLTAYTRERLAGYKVV 503
Query: 410 KSVIIEDELPKTATGKIQKFVLREI 434
V DELPKTATGKIQK+ LRE+
Sbjct: 504 HRVEFVDELPKTATGKIQKYELREL 528
>gi|448501370|ref|ZP_21612160.1| AMP-dependent synthetase and ligase [Halorubrum coriense DSM 10284]
gi|445695162|gb|ELZ47272.1| AMP-dependent synthetase and ligase [Halorubrum coriense DSM 10284]
Length = 538
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 152/444 (34%), Positives = 225/444 (50%), Gaps = 22/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPV-LIHDDVSATSSPT 63
RL S +L + ++ D + + A P+ T L + D + +
Sbjct: 89 RLTPSDFSYMLSDAGVDAIYADAEYAANVEAIRDEVPTETFLTNDADAVEGDWESFDAAL 148
Query: 64 VGHPNFKWVQPESEWDP-MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
+ +PE + D + +NYTSGTT PKGV HR + I I + V+
Sbjct: 149 DDADPDAYERPEMDEDEVITINYTSGTTGDPKGVCRTHRAETLHAYLISIHQEITDDDVY 208
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSS 182
LWTLPMFH NGW + + + G ++C R VDV + I+ V++ C A VLNML
Sbjct: 209 LWTLPMFHVNGWGHIYAITGAGARHVCTRGVDVAETFDRIRGEDVSYFCAAPTVLNMLGD 268
Query: 183 SPSTK----PLDRPVKILTSGASPPAAVLLRT--ESLGFVVSHSYGLTETAGFVVSCAWK 236
+ + D V++ T+GA+PP A +RT E G+ + H YG TET + + K
Sbjct: 269 HYADRGGATAGDNDVRVATAGAAPPEAT-IRTVEEEFGWDLKHVYGATETGPLITTSDAK 327
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
+ +D +R +K QG+ +G D+ VV E G V DG++ GEIV R +M Y
Sbjct: 328 RHFEADSD-DRFAVKKTQGIGYLG-TDVRVVD-ENGEDVAADGETIGEIVVRGNQVMDRY 384
Query: 297 LKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
E + + R +++ GD+ VV DG++ I+DR KD+IISGGENISS E+E L+
Sbjct: 385 WNKPEATEQAFSERLEGYYHMGDLAVVDEDGFVSIQDRKKDIIISGGENISSIELEDTLF 444
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP-----TEEAIIEFCRARLPHYMAH 409
+ +++VA++ D+ WG+ P AFV + S P T E + F R R+ Y
Sbjct: 445 EHDVVSDVAVIPAPDERWGETPKAFVVPE---SGDPDDAGATPEELRAFVRERVADYKTP 501
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
V +LP TATGKIQK+ LRE
Sbjct: 502 GEVEFVAKLPTTATGKIQKYELRE 525
>gi|284166613|ref|YP_003404892.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
gi|284016268|gb|ADB62219.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
Length = 537
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 152/450 (33%), Positives = 226/450 (50%), Gaps = 35/450 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS---- 60
RL S +L +E ++ DY A + P +P I +D A
Sbjct: 89 RLTSDDFSYMLEDAEVDAIYADYD------FADKIEPIRDEVPTETFITNDADAVEGEWE 142
Query: 61 --SPTVGHPNFKWVQPESEWDPM-ALNYTSGTTSSPKGVVHCHRG----LFIITVSSLID 113
+ ++ +PE D + +NYTSGTT PKGV HR ++IT
Sbjct: 143 EFDAVLEDAGTEYDRPEMNEDEIITMNYTSGTTGDPKGVCRTHRSETLHAYLITAHQ--- 199
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
+ + V+LWTLPMFH NGW + + + +G ++C R VD I+ ++ V+++CGA
Sbjct: 200 -ELRDDDVYLWTLPMFHVNGWGHIYAVTGIGAKHVCTRGVDAGDIFEAVQTEDVSYMCGA 258
Query: 174 LVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETA 227
VLNML P T + V+I T+G++PP A + E G+ + H YG TET
Sbjct: 259 PTVLNMLIDYYEEHDPETTGAN-DVRIATAGSAPPEATIRTVEDEFGWYLKHVYGATETG 317
Query: 228 GFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVF 287
+ + + ++ D +R +K RQG+ +G ++ VV E G V D S GEIV
Sbjct: 318 PLITTSDARRTFDD-DDLDRFAIKKRQGLGYLG-TEIRVVD-EDGNDVDRDDASIGEIVV 374
Query: 288 RSGSIMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENIS 345
R +M Y E + D +++TGD+ VV G + I+DR KD+IISGGENIS
Sbjct: 375 RGNQVMEKYWNKPEETEEAFNDRVEGYYHTGDLAVVDEHGMISIQDRKKDIIISGGENIS 434
Query: 346 SAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARL 403
S E+E L+ +P +++VA++ WG+ P AFV P T + ++EF R L
Sbjct: 435 SIELEDTLFDHPEVSDVAVIPAPSDEWGETPKAFVVPSNGDPDDPSVTRDELVEFTRDNL 494
Query: 404 PHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y + V +ELP TATGKIQK+ LR+
Sbjct: 495 AGYKVVREVEFVEELPTTATGKIQKYELRQ 524
>gi|346327234|gb|EGX96830.1| AMP-binding domain protein [Cordyceps militaris CM01]
Length = 569
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 156/457 (34%), Positives = 238/457 (52%), Gaps = 38/457 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL ++ +L +E + VD + + L LS + S P+++ +D S P
Sbjct: 114 RLKPDDIAYILEFAEVDSIIVDDEFAEL----LSSYRSKH-SKVPIIVDNDTDVVSGPQA 168
Query: 65 GHPNFKWVQ-------------------PESEWDPMALNYTSGTTSSPKGVVHCHRGLFI 105
G N ++ E+E D +A+ +TSGTTS PKGVV+ HRG ++
Sbjct: 169 GQYNQAVIEGLAYDAEQGSKGWSGLHAHAENEDDMLAIPFTSGTTSKPKGVVYTHRGAYL 228
Query: 106 ITVSSLIDWRIPNQP--VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
V+++I+ + NQ +LWTLPMFH GW++ W + AV G N+CLRK+D P I+ ++K
Sbjct: 229 AAVANIIESGL-NQGRCKYLWTLPMFHACGWTFPWSIVAVRGVNVCLRKIDYPTIWRLLK 287
Query: 164 HHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSYG 222
GVTH A V +L ++ L PV++ T ASPP L + L + H YG
Sbjct: 288 EEGVTHFNAAPTVNTLLVAAKEASKLPHPVQV-TVAASPPTGHLFEQMTKLNLMPVHVYG 346
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKHD 278
+TET G + C +W+TL E+ ARQG I + ++ + + V +
Sbjct: 347 MTETYGPITKCYTMPEWDTLPPAEKYAKMARQGHGFITSLPIRIIKQDQPDGVLIDVAKN 406
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
G+ GEIVF Y KD ++ + ++GD+ V H DG +I DR+KD+II
Sbjct: 407 GKEIGEIVFFGNICAKEYYKDA-AATRTLFAGGALHSGDLAVWHPDGSAQILDRAKDIII 465
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ES+L +P + E +VA + WG+ P A+V++K K +I +
Sbjct: 466 SGGENISSVALESMLVQHPDVLECGVVAVPSEQWGEVPKAYVTVK--EGKALQGADLIAW 523
Query: 399 CRAR--LPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
R + +M K V + +LPKT+TGKI+K LR+
Sbjct: 524 ARGNSAISRFMVPKEVEVVPDLPKTSTGKIKKNDLRD 560
>gi|300711682|ref|YP_003737496.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|448296210|ref|ZP_21486270.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|299125365|gb|ADJ15704.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
gi|445582182|gb|ELY36526.1| AMP-dependent synthetase and ligase [Halalkalicoccus jeotgali B3]
Length = 537
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 228/445 (51%), Gaps = 25/445 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + +L+ + K + D++ A + P +P + I +D +AT V
Sbjct: 89 RLVPEDFEYILNDAGVKAVIADHEH------AGKIEPIRGSVPTDLYISNDANATDGDWV 142
Query: 65 GHPNF------KWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
++ +PE +E + + +NYTSGTT PKGV HR + + I
Sbjct: 143 DFDALLSDSTGEYDRPEMTEDEVITINYTSGTTGDPKGVCRTHRTETLHAYLVSLHQEIR 202
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
+ V+LWTLPMFH NGW + + + +G ++C R +D I I+ V+++C A VL
Sbjct: 203 DDDVYLWTLPMFHVNGWGHIYAITGMGAKHVCTRGIDAEWILETIRTEDVSYLCAAPTVL 262
Query: 178 NML----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVS 232
NML + PV+ T+GA+PP A + E G+ + H YG TET + +
Sbjct: 263 NMLIERYEETGEGTQGSNPVRAATAGAAPPEATIRTVEDEFGWYLKHVYGATETGPLITT 322
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
+ ++ + T+R +K RQG+ +G ++ VV E G V D + GEIV R +
Sbjct: 323 SDARRLFDPDS-TDRFAIKKRQGLGYLG-TEIRVVDDE-GEDVPRDDATIGEIVVRGNQV 379
Query: 293 MLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
M GY + + + D +++TGD+ VV G + I+DR KD+IISGGENISS E+E
Sbjct: 380 MEGYWEKPDATEEAFSDRIEGYYHTGDLAVVDEHGMISIQDRKKDIIISGGENISSIELE 439
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMA 408
L+ +PA+ + A++ K WG+ P AF+ P + E I EF R RL Y
Sbjct: 440 DTLFEHPAVADAAVIPAPSKKWGETPKAFLVPANGDPDSPGASAEEITEFTRERLAGYKV 499
Query: 409 HKSVIIEDELPKTATGKIQKFVLRE 433
+ +ELP TATGKIQKF LR+
Sbjct: 500 VHEIEFVEELPTTATGKIQKFELRQ 524
>gi|448318800|ref|ZP_21508312.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
gi|445597981|gb|ELY52051.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
Length = 542
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 152/454 (33%), Positives = 227/454 (50%), Gaps = 34/454 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILP-KPVLIHDDVSATSSPT 63
RL +L E+ L DY+ + P+ T + + I + + +
Sbjct: 85 RLTPGEYEYILGDCEANTLIADYEYAEKIEPIRDSIPAETFVGYRADEIDGEWTDYEAFL 144
Query: 64 VGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
GH + +P+ E D ++NYTSGTT PKGVV HR + I + +
Sbjct: 145 EGHSADEPDRPDIGEDDDASINYTSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDNY 204
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSS 182
LWTLPMFH NGW +++ + GGT++C R D ++ ++ + VT +CGA VLN L+
Sbjct: 205 LWTLPMFHCNGWGHTYAITGTGGTHVCQRTFDAEGVFDRVREYDVTFMCGAPTVLNSLTQ 264
Query: 183 SPSTKPL-------------------DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYG 222
+ DR V+I T+G++P A + E + + H YG
Sbjct: 265 YHDDRAAPEGQRGEGGETAGAFETTGDRDVRIATAGSAPATATIETVEDEFDWRIIHIYG 324
Query: 223 LTETAGFVVSCAWKSQWNTLADTERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQS 281
LTETA + + + +R R LK +QG T+ D+ +V E G V DG++
Sbjct: 325 LTETAPIITTSNSPRRL-----AQRGRELKVKQGAETL-CTDVRIVD-EDGEDVPRDGRT 377
Query: 282 QGEIVFRSGSIMLGYLKDQEGSSLCM--RDNDWFYTGDIGVVHSDGYLEIKDRSKDVIIS 339
GEIV R +M YL E + R +F+TGD+ + DG + I+DR KD+IIS
Sbjct: 378 IGEIVVRGNQVMDRYLNKPEETERAFNERLEGYFHTGDLATIDEDGMVAIQDRKKDIIIS 437
Query: 340 GGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFC 399
GGENISS E+E VLY +P + + A++ + WG+ P A + +PTE+ I+EF
Sbjct: 438 GGENISSIELEDVLYDHPDVQKAAVIPVPSEQWGETPKALIVPA--ADAEPTEDEIVEFV 495
Query: 400 RARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
RL Y SV ++LP+TATGK+QK+ LRE
Sbjct: 496 TDRLAGYKKPTSVEFVEDLPETATGKVQKYELRE 529
>gi|315055349|ref|XP_003177049.1| luciferin 4-monooxygenase [Arthroderma gypseum CBS 118893]
gi|311338895|gb|EFQ98097.1| luciferin 4-monooxygenase [Arthroderma gypseum CBS 118893]
Length = 574
Score = 234 bits (596), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 144/371 (38%), Positives = 209/371 (56%), Gaps = 14/371 (3%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPV---FLWTLPMF 129
Q E +AL YTSGTT+ PKGV + HRG ++ + ++++ + Q +LW LPMF
Sbjct: 199 QAADEESLIALAYTSGTTARPKGVEYIHRGCYLAALGNIVESGLNFQQGRCGYLWILPMF 258
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPL 189
H GW++ W + AV GT+ CLRK+D P I+ ++K +TH A V +L ++ + L
Sbjct: 259 HAMGWTFPWSVTAVRGTHYCLRKIDYPEIWRMLKQENITHFNAAPTVNTLLCAAKEAERL 318
Query: 190 DRPVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERA 248
RPV++ T ASPP A L + S+ H YGLTET G + W+T+ E+
Sbjct: 319 SRPVRV-TVAASPPTAHLFEQMTSVNLHPVHVYGLTETYGPITKGYHMPSWDTIPLKEKY 377
Query: 249 RLKARQGVRTIGLADMDVVH---PE-TGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
+ ARQG + V+ PE T + V DG+ GEIVF GY KD +
Sbjct: 378 KRMARQGHGFLTSLPARVIKTDVPEGTIVDVSKDGKEIGEIVFTGNICARGYYKDVAATD 437
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
++GD+ V H DG ++I DR+KD+IISGGENISS +E++L +P I E +
Sbjct: 438 KLFA-GGVLHSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALEAMLATHPDILEAGV 496
Query: 365 VAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTA 422
VA D WG+RP A+V++ + K+ T II + + + + +M + V I ELPKT+
Sbjct: 497 VAVSDAHWGERPKAYVTI--QTGKQVTGPEIIVWAKNSSGISRFMVPREVEIVPELPKTS 554
Query: 423 TGKIQKFVLRE 433
TGKI+K VLRE
Sbjct: 555 TGKIKKNVLRE 565
>gi|448319627|ref|ZP_21509123.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
gi|445607620|gb|ELY61500.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
Length = 553
Score = 234 bits (596), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 130/374 (34%), Positives = 208/374 (55%), Gaps = 13/374 (3%)
Query: 70 KWVQPESEWDPM-ALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPM 128
++ +PE D + +NYTSGTT PKGV HRG I + + + +LWTLPM
Sbjct: 170 EYDRPEMHEDEIITINYTSGTTGDPKGVCRTHRGETIHAYLVAVHQNLTDDDTYLWTLPM 229
Query: 129 FHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKP 188
FH NGW + + + +G ++C R VD ++ I+ V+++CGA VLNML
Sbjct: 230 FHVNGWGHIYAVTGMGAKHVCTRGVDAEWLFETIREEDVSYLCGAPTVLNMLIDYYGDNA 289
Query: 189 LD----RPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLA 243
++ V+I T+G++PP A L E G+ + H YG TET + + + ++ +
Sbjct: 290 VETTGANDVRIATAGSAPPEATLRTVEDEFGWYLKHVYGATETGPLITTSDARRHFDDDS 349
Query: 244 DTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
D+ R +K RQG+ +G ++ VV E G V DG++ GE+V + +M Y E +
Sbjct: 350 DS-RFAVKKRQGLGFMG-TEVRVV-GEDGEDVPRDGETLGEVVVQGNQVMEKYWNKPEET 406
Query: 304 SLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
D +++TGD+ + +G + I+DR KD+IISGGENISS E+E L+ +P +++
Sbjct: 407 EEAFSDRVEGYYHTGDLATIDENGMIAIQDRKKDIIISGGENISSIELEDTLFDHPEVSD 466
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIEDELP 419
A++ + WG+ P AFV + +P +E+ ++ F R L +Y + + +ELP
Sbjct: 467 AAVIPSPSEQWGETPKAFVVPESGDPDEPGVSEDDLVAFTREHLANYKTVQRIEFVEELP 526
Query: 420 KTATGKIQKFVLRE 433
TATGK+QK+ LRE
Sbjct: 527 TTATGKVQKYELRE 540
>gi|435846241|ref|YP_007308491.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
gi|433672509|gb|AGB36701.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
Length = 534
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/366 (38%), Positives = 202/366 (55%), Gaps = 17/366 (4%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWS 135
SE D ++NYTSGTT PKGVV HR + I + V+LWTLPMFH NGW
Sbjct: 165 SEDDDASINYTSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDVYLWTLPMFHCNGWG 224
Query: 136 YSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDR---- 191
+++ + GGT++C R D + ++ + VT +CGA VLN L ++
Sbjct: 225 HTYAITGTGGTHVCQRTFDAEGVLDRVREYDVTFMCGAPTVLNSLIQYHDEHDVETTGEC 284
Query: 192 PVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERAR- 249
V+I T+G++P A + E + + H YGLTETA + A + LA +R R
Sbjct: 285 DVRIATAGSAPATATIETVEDEFDWRIIHIYGLTETAPII---ATSNSSRRLA--QRGRE 339
Query: 250 LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLK--DQEGSSLCM 307
LK +QG T+ D+ VV E G V DG++ GEIV R +M YL D +
Sbjct: 340 LKVKQGAETL-CTDVRVVD-EDGEDVPRDGETIGEIVVRGNQVMDRYLNKPDATEQAFSE 397
Query: 308 RDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQ 367
R +F+TGD+ + DG + I+DR KD+IISGGENISS E+E VLY +P + + A++
Sbjct: 398 RLEGYFHTGDLATIDEDGMVAIQDRKKDIIISGGENISSIELEDVLYDHPDVQKAAVIPV 457
Query: 368 RDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQ 427
+ WG+ P A + +PTEE I++F L Y SV + ++LP+TATGK+Q
Sbjct: 458 PSEQWGETPKALIVPG--ADAEPTEEEIVDFVTDHLAGYKKPTSVEVVEDLPETATGKVQ 515
Query: 428 KFVLRE 433
K+ LRE
Sbjct: 516 KYELRE 521
>gi|346971387|gb|EGY14839.1| 2-succinylbenzoate-CoA ligase [Verticillium dahliae VdLs.17]
Length = 580
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 142/371 (38%), Positives = 217/371 (58%), Gaps = 14/371 (3%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP---NQPVFLWTLPMF 129
Q SE D +++ +TSGTTS PKGVV+ HRG ++ + ++I+ + + +LWTLPMF
Sbjct: 206 QCASEDDMISIPFTSGTTSRPKGVVYTHRGAYLAAMGNIIESGLNYHVGRCKYLWTLPMF 265
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPL 189
H GW++ W + AV GT++CLRK+D P+I+ ++K G+TH A V +L S+ + L
Sbjct: 266 HAMGWTFPWSITAVRGTHVCLRKIDYPLIWKLLKEEGITHFNAAPTVNTLLCSAKEAEKL 325
Query: 190 DRPVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERA 248
+ V++ T ASPP+ L + +L H YGLTET G + W+ L+ ++R
Sbjct: 326 PQEVRV-TVAASPPSGHLFEQMTNLNLHPVHVYGLTETYGPITKGYQMPSWDALSPSDRY 384
Query: 249 RLKARQG---VRTIGLADMDVVHPETGM-SVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
ARQG V ++ + + PE + V DG+ GEIVF Y KD E +
Sbjct: 385 AKMARQGHGFVTSLPIRIIKTDLPEGELVDVARDGKEIGEIVFFGNICAKEYYKDAEATR 444
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
++GD+ V H DG +I DR+KD+IISGGENISS +ES+L +P + E A+
Sbjct: 445 KLFAGGA-LHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESMLVQHPDLLEAAV 503
Query: 365 VAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTA 422
VA D WG+RP A+V++K ++ E +I + + + + +M + V + +ELPKT+
Sbjct: 504 VAVPDSHWGERPKAYVTVK--EGRQVAGEDVISWAKHQSNISKFMVPREVEVVEELPKTS 561
Query: 423 TGKIQKFVLRE 433
TGK++K VLRE
Sbjct: 562 TGKLKKNVLRE 572
>gi|86740864|ref|YP_481264.1| AMP-dependent synthetase/ligase [Frankia sp. CcI3]
gi|86567726|gb|ABD11535.1| AMP-dependent synthetase and ligase [Frankia sp. CcI3]
Length = 511
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 155/438 (35%), Positives = 230/438 (52%), Gaps = 43/438 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + VS ++ HS S++L +D P LS T K VL A S +
Sbjct: 95 RLSPEEVSYIVEHSGSEVLLID----PELEEKLS---GVTAKQKFVL-----GAESDAEL 142
Query: 65 GHPNFKWVQPESEWDP-----MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQ 119
+++ + W+P +NYTSGTT+ PKGV HR +++ V+ + + ++
Sbjct: 143 ----YRFDAEPTPWEPDENATATVNYTSGTTARPKGVQITHRNIWVNAVTFALHAGVTDR 198
Query: 120 PVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNM 179
V+L TLPMFH NGW +GM +G + LRK+D P I ++ HGVT +C A V+N
Sbjct: 199 DVYLHTLPMFHANGWGMPFGMTGLGVQQVVLRKIDGPEILRRVEQHGVTVMCAAPAVVNA 258
Query: 180 LSSS----PSTKPLDRPVKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTETAGFVVSCA 234
+ + P V+++ +GA PP + R E LG+ YGLTET+ +
Sbjct: 259 VLDAVRDWDGEVPGRDRVRVICAGAPPPTKTIQRVEEELGWEFIQIYGLTETSPLLTINR 318
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+ +W+ L +RA R G P G+++K GE++ RS I+
Sbjct: 319 SRVEWDDLPPEDRAGKLVRAGA------------PALGVTLKL--SDSGEVLARSNVILA 364
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
GY + + S+ + WF+TGD GV+ +GYL I DR KDVII+GGEN+SS +VE L+
Sbjct: 365 GYWERPQESAGALA-GGWFHTGDGGVIDDEGYLTISDRKKDVIITGGENVSSIQVEDCLF 423
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PA+ EVA++ D+ WG+ A V L + TE +I+ C+ RL Y A SV
Sbjct: 424 GHPAVAEVAVIGVPDEKWGEAIKALVVLA--EGRTATEAELIKHCKERLASYKAPTSVEF 481
Query: 415 EDELPKTATGKIQKFVLR 432
D+L +TATGK+QKF LR
Sbjct: 482 RDQLARTATGKLQKFKLR 499
>gi|448542059|ref|ZP_21624564.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|448552632|ref|ZP_21630135.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|448553314|ref|ZP_21630288.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
gi|445707398|gb|ELZ59254.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|445708133|gb|ELZ59975.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|445720456|gb|ELZ72129.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
Length = 538
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 156/449 (34%), Positives = 229/449 (51%), Gaps = 32/449 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + LL S + +++ DYQ A + +P V + +D +A +
Sbjct: 89 RLTTEDYEYLLSDSGATVVYADYQY------AGKIEAVRDDVPAEVFVTNDPAAVDGDWL 142
Query: 65 GHPNF-------KWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
F + +PE SE + + +NYTSGTT PKGV HR + I I
Sbjct: 143 DFEAFLDEADADDYERPEMSEDELITINYTSGTTGDPKGVCRTHRTESLHAQLVTIHHHI 202
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+ V+LWTLPMFH NGW + + + G ++C R VD ++ I V+ C A V
Sbjct: 203 ADDDVYLWTLPMFHVNGWGHIYAVTGRGAKHVCTRGVDAEQVFDAITEEDVSFFCCAPTV 262
Query: 177 LNMLSS-SPSTKPL---DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVV 231
L++L + P D PV++ +G++ P+A + TES G+ + YG TET +
Sbjct: 263 LSILREYAEEHDPAYAGDNPVRVTAAGSAAPSATIRHTESEFGWEFTQLYGATETGPLIA 322
Query: 232 SCAWKSQWNTLADTE---RARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ S N L E R LK RQGV +G D+ VV + G V D + GE+V R
Sbjct: 323 T----SDANRLIPDEGGLRFSLKQRQGVAPLG-TDLRVVD-DDGEQVPRDDATIGEVVVR 376
Query: 289 SGSIMLGYLK--DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+M Y D+ + R W++TGD+ VV+ DG + I+DR KD+IISGGENISS
Sbjct: 377 GNQVMEKYWNKPDETHDAFNDRLEGWYHTGDLAVVNEDGMIAIQDRKKDIIISGGENISS 436
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLP 404
E+E L+ + A+ +VA++ + WG+ P AFV + P T E + E+ R RL
Sbjct: 437 VELEDALFDHDAVGDVAVIPAPSEKWGETPKAFVVPANGDVENPGVTAEELTEYTRDRLA 496
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y A + +E+PKTATGKIQK+ LR+
Sbjct: 497 GYKAIREFEFVEEIPKTATGKIQKYELRK 525
>gi|326478482|gb|EGE02492.1| luciferin 4-monooxygenase [Trichophyton equinum CBS 127.97]
Length = 574
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 210/371 (56%), Gaps = 14/371 (3%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPV---FLWTLPMF 129
Q E +AL YTSGTT+ PKGV + HRG ++ + ++I+ + Q +LW LPMF
Sbjct: 199 QAADEESLIALAYTSGTTARPKGVEYIHRGCYLAALGNIIESGLNFQQGRCGYLWILPMF 258
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPL 189
H GW++ W + AV GT+ CLRK+D P I+ ++K +TH A V +L ++ + L
Sbjct: 259 HAMGWTFPWSITAVRGTHYCLRKIDYPEIWRMLKQENITHFNAAPTVNTLLCAAKEAERL 318
Query: 190 DRPVKILTSGASPPAAVLL-RTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERA 248
RPV++ T ASPP A L + S+ H YGLTET G + W+T+ E+
Sbjct: 319 SRPVRV-TVAASPPTAHLFEQMTSVNLHPVHVYGLTETYGPITKAYHMPLWDTIPLKEKY 377
Query: 249 RLKARQGVRTIGLADMDVVH---PE-TGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
+ ARQG + + V+ PE T + V+ DG+ GEIVF GY KD +
Sbjct: 378 KRMARQGHGFLTSMPVRVIKTDVPEGTIIDVRKDGKEIGEIVFTGNICARGYYKDTAATD 437
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
++GD+ V H DG ++I DR+KD+IISGGENISS +E++L +P I E +
Sbjct: 438 KLFA-GGVLHSGDLAVWHPDGAVQILDRAKDIIISGGENISSVALEAMLATHPDILEAGV 496
Query: 365 VAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKTA 422
VA D WG+RP A+V++ + K+ T II + + + + M + V I ELPKT+
Sbjct: 497 VAVSDVHWGERPKAYVTI--QAGKQVTGLEIIAWAKNSSGISRSMVPREVEIVLELPKTS 554
Query: 423 TGKIQKFVLRE 433
TGKI+K VLRE
Sbjct: 555 TGKIKKNVLRE 565
>gi|448318801|ref|ZP_21508313.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
gi|445597982|gb|ELY52052.1| AMP-dependent synthetase and ligase [Natronococcus jeotgali DSM
18795]
Length = 540
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 210/391 (53%), Gaps = 22/391 (5%)
Query: 54 DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
+D+ A + P P SE D + +NYTSGTT PKGV+ HR + I
Sbjct: 148 EDLIAETDPDYDRPEM------SEDDVITINYTSGTTGDPKGVMRTHRTESLHAQLVTIH 201
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
I + V+LWTLPMFH NGW + + + +G ++C R VD I+ V+ +C A
Sbjct: 202 HEIRDDDVYLWTLPMFHVNGWGHIYAITGMGAKHVCTRGVDAEANLRQIREEDVSFLCCA 261
Query: 174 LVVLNML------SSSPSTKPLDRPVKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTET 226
VL + + P+T D +++ +GA+PP +++ E G+ YG TET
Sbjct: 262 PTVLTLFEEYLEETDVPTTG--DASIRVTAAGAAPPESIIETVEEEFGWYFRQLYGATET 319
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
+ + A + + ++ ER LK RQG+ +G +++VV + G V D ++ GEI+
Sbjct: 320 GPLIGTSATRRLIDEDSE-ERFALKKRQGIAPLG-TEVEVVD-DDGNEVPWDDETIGEIL 376
Query: 287 FRSGSIMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
R +M GY + E + D WF+TGD+ VV+ DG + I+DR KD+I+SGGENI
Sbjct: 377 VRGNQVMEGYWEKPEETEEAFDDKREGWFHTGDLAVVNEDGLMAIQDRKKDIIVSGGENI 436
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRAR 402
SS E+E L+ +P + +VA++ + WG+ P AFV + P TE+ + + R R
Sbjct: 437 SSIELEDALFDHPDVADVAIIPAPSEKWGETPKAFVVPANGDPENPPVTEDDLTAYTRER 496
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
L Y V DELPKTATGKIQK+ LRE
Sbjct: 497 LAGYKVVHRVEFVDELPKTATGKIQKYELRE 527
>gi|448587034|ref|ZP_21648786.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
gi|445724254|gb|ELZ75888.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
Length = 538
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 157/449 (34%), Positives = 229/449 (51%), Gaps = 32/449 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + LL S + +++ DYQ A + +P V + +D +A +
Sbjct: 89 RLTTEDYEYLLSDSGASVVYADYQY------AGKIEAVRDDVPAEVFVTNDPAAVDGDWL 142
Query: 65 GHPNF-------KWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
F + +PE SE + + +NYTSGTT PKGV HR + I I
Sbjct: 143 DFEAFLDEADADDYERPEMSEDELITINYTSGTTGDPKGVCRTHRTESLHAQLVTIHHHI 202
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+ V+LWTLPMFH NGW + + + G ++C R VD ++ I V+ C A V
Sbjct: 203 ADDDVYLWTLPMFHVNGWGHIYAVTGRGAKHVCTRGVDAEQVFDAIATEDVSFFCCAPTV 262
Query: 177 LNMLSS-SPSTKPL---DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVV 231
L++L + P D PV++ +G++ P+A + TES G+ + YG TET +
Sbjct: 263 LSILREYAEEHDPAYAGDNPVRVTAAGSAAPSATIRHTESEFGWEFTQLYGATETGPLIA 322
Query: 232 SCAWKSQWNTLADTE---RARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ S N L E R LK RQGV +G D+ VV E G V D + GE+V R
Sbjct: 323 T----SDANRLIPDEGGLRFSLKQRQGVAPLG-TDLRVVD-EDGERVPRDDATIGEVVVR 376
Query: 289 SGSIMLGYLK--DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+M Y D+ + R W++TGD+ VV+ DG + I+DR KD+IISGGENISS
Sbjct: 377 GNQVMEKYWNKPDETHDAFNDRLEGWYHTGDLAVVNEDGMIAIQDRKKDIIISGGENISS 436
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLP 404
E+E L+ + A+ +VA++ + WG+ P AFV + P T E + E+ R RL
Sbjct: 437 VELEDTLFDHDAVGDVAVIPAPSEKWGETPKAFVVPANGDVENPGVTAEELSEYTRDRLA 496
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y A + +E+PKTATGKIQK+ LR+
Sbjct: 497 GYKAIREFEFVEEIPKTATGKIQKYELRK 525
>gi|435846240|ref|YP_007308490.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
gi|433672508|gb|AGB36700.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Natronococcus
occultus SP4]
Length = 540
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 227/444 (51%), Gaps = 20/444 (4%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT---SS 61
RL + + +L + + DY+ + A P+ T + +D
Sbjct: 89 RLTPEDYAYMLDDAGVDAVVADYEYAHKIDAVRDEVPTETFIATDADALEDCDGEWLDFE 148
Query: 62 PTVGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP 120
+G + + +PE E D + +NYTSGTT PKGV+ HR + I I +
Sbjct: 149 ALIGEADADYDRPEMHEDDVITINYTSGTTGDPKGVMRTHRTESLHAQLVTIHHEISDDD 208
Query: 121 VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML 180
V+LWTLPMFH NGW + + + +G ++C R D I+ V+ +C A VL +
Sbjct: 209 VYLWTLPMFHVNGWGHIYAITGMGAKHVCTRGTDAETNLRQIREEDVSFLCCAPTVLTLF 268
Query: 181 ------SSSPSTKPLDRPVKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTETAGFVVSC 233
+ P+T D P+++ +GA+PP +++ E G+ YG TET + +
Sbjct: 269 EEYLEEADVPTTG--DAPMRVTAAGAAPPESIIETVEEEFGWHFRQLYGATETGPLIGTS 326
Query: 234 AWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIM 293
A + + ++ ER LK RQG+ + +++VV + G V D ++ GEIV R +M
Sbjct: 327 ATRRLIDEDSE-ERFALKKRQGIAPLA-TEVEVVD-DDGTEVPWDDETIGEIVVRGNQVM 383
Query: 294 LGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVES 351
GY + E + D WF+TGD+ VV+ +G + I+DR KD+I+SGGENISS E+E
Sbjct: 384 DGYWEKPEETEAAFNDKREGWFHTGDLAVVNENGLMAIQDRKKDIIVSGGENISSIELED 443
Query: 352 VLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAH 409
L+ +P + +VA++ + WG+ P AFV + P TE+ + + R RL Y
Sbjct: 444 ALFDHPDVGDVAIIPAPSEKWGETPKAFVVPANGDPENPQVTEDDLTAYTRERLAGYKVV 503
Query: 410 KSVIIEDELPKTATGKIQKFVLRE 433
V DELPKTATGKIQK+ LRE
Sbjct: 504 HRVEFVDELPKTATGKIQKYELRE 527
>gi|448319893|ref|ZP_21509381.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
gi|445606299|gb|ELY60203.1| AMP-dependent synthetase and ligase [Natronococcus amylolyticus DSM
10524]
Length = 527
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/366 (38%), Positives = 198/366 (54%), Gaps = 17/366 (4%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWS 135
E D ++NYTSGTT PKGVV HR + I + +LWTLPMFH NGW
Sbjct: 158 GEDDDASINYTSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDTYLWTLPMFHCNGWG 217
Query: 136 YSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML----SSSPSTKPLDR 191
+++ + GGT++C R D + ++ + VT +CGA VLN L + DR
Sbjct: 218 HTYAITGTGGTHVCQRTFDAEGVLDRVREYDVTFMCGAPTVLNSLIQYHEENDVKTAGDR 277
Query: 192 PVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERAR- 249
V+I T+G++P A + E + + H YGLTETA + + + +R R
Sbjct: 278 DVRIATAGSAPATATIETVEDEFDWRIIHIYGLTETAPIITTSNSPRRL-----AQRGRE 332
Query: 250 LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLK--DQEGSSLCM 307
LK +QG T+ D+ VV E G V DG + GEIV R +M YL D +
Sbjct: 333 LKVKQGAETL-CTDVRVVD-EDGEDVPRDGDTIGEIVVRGNQVMDRYLNKPDATERAFSE 390
Query: 308 RDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQ 367
R +F+TGD+ + DG + I+DR KD+IISGGENISS E+E VLY +P + + A++
Sbjct: 391 RLEGYFHTGDLATIDGDGMVAIQDRKKDIIISGGENISSIELEDVLYDHPDVQKAAVIPV 450
Query: 368 RDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQ 427
+ WG+ P A + + PT + I+EF RL Y SV I ++LP+TATGK+Q
Sbjct: 451 PSEQWGETPKALIVPGGDAD--PTVDEIVEFVTDRLAGYKKPTSVEIVEDLPETATGKVQ 508
Query: 428 KFVLRE 433
K+ LRE
Sbjct: 509 KYELRE 514
>gi|448312998|ref|ZP_21502728.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
gi|445599657|gb|ELY53686.1| AMP-dependent synthetase and ligase [Natronolimnobius
innermongolicus JCM 12255]
Length = 537
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 226/446 (50%), Gaps = 27/446 (6%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATS---- 60
RL S +L +E ++ DY A + P +P I +D
Sbjct: 89 RLTPDDFSYMLEDAEVDAVYADYD------FADKIEPIRDEVPVETFITNDAERVEGEWE 142
Query: 61 --SPTVGHPNFKWVQPESEWDPM-ALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP 117
+ + +PE + D + +NYTSGTT PKGV HR I ++
Sbjct: 143 AFDDVLADAGTDYDRPEMDEDEIVTINYTSGTTGDPKGVCRTHRAETIHAYLITAHQQLQ 202
Query: 118 NQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVL 177
+ V+LWTLPMFH NGW + + + +G ++C R VD I+ ++ V+++CGA VL
Sbjct: 203 DDDVYLWTLPMFHVNGWGHIYAVTGIGAKHVCTRGVDAGDIFEAVRTEDVSYMCGAPTVL 262
Query: 178 NML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVV 231
NML + P T + V+I T+G++PP A + E G+ + H YG TET +
Sbjct: 263 NMLVDYYEENDPETTGAN-DVRIATAGSAPPEATIRTVEDEFGWYLKHVYGATETGPLIT 321
Query: 232 SCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGS 291
+ + ++ + ++R +K RQG+ +G D+ VV E G V D ++ GEIV +
Sbjct: 322 TSDARRTFDDDS-SDRFAIKKRQGLGYLG-TDIRVVD-EDGNDVPRDDETIGEIVVQGNQ 378
Query: 292 IMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEV 349
+M Y E + D +++ GD+ V +G L I+DR KD+IISGGENISS E+
Sbjct: 379 VMEKYWNKPEETEEAFNDRLEGYYHMGDLATVDENGMLSIQDRKKDIIISGGENISSIEL 438
Query: 350 ESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYM 407
E L+ +P +++VA++ WG+ P AFV E P T + +++F R L Y
Sbjct: 439 EDTLFDHPEVSDVAVIPAPSDQWGETPKAFVVPSNEDPDDPSVTADELVDFTRDNLAGYK 498
Query: 408 AHKSVIIEDELPKTATGKIQKFVLRE 433
+ V +ELP TATGKIQK+ LR+
Sbjct: 499 VVREVEFVEELPTTATGKIQKYELRQ 524
>gi|358379023|gb|EHK16704.1| hypothetical protein TRIVIDRAFT_195594 [Trichoderma virens Gv29-8]
Length = 567
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 157/457 (34%), Positives = 239/457 (52%), Gaps = 38/457 (8%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPK-PVLIHDDVSATSSPT 63
RL ++ + +E + VD++ L L LF PK P++I D AT
Sbjct: 113 RLKPDDIAYIFEFAEVDSIIVDHEYVHL----LDLFKERH--PKIPLIIDSDTDATEGQL 166
Query: 64 VG---------------HPNFKWV----QPESEWDPMALNYTSGTTSSPKGVVHCHRGLF 104
G N W +E D +A+ +TSGTTS PKGVV +RG +
Sbjct: 167 CGPFDEAVLEGLNYDRATGNAGWAGLHAHATNEDDMIAIPFTSGTTSRPKGVVFTNRGSY 226
Query: 105 IITVSSLIDWRIPN-QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIK 163
+ + ++I+ + + + +LWTLPMFH GW++ W + AV G N+CLRK+D P+I+ ++K
Sbjct: 227 LAAMGNIIESGLNHGRCKYLWTLPMFHAIGWTFPWAVVAVRGVNVCLRKIDYPLIWKLLK 286
Query: 164 HHGVTHICGALVVLNMLSSSPSTKPLDRPVKILTSGASPPAAVLL-RTESLGFVVSHSYG 222
G+TH A V +L ++ + L + V++ T ASPP+ L + +L + H YG
Sbjct: 287 EQGITHFNAAPTVNTLLVAAKEAERLPQEVRV-TVAASPPSGHLFEQMTNLNLIPVHVYG 345
Query: 223 LTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG----MSVKHD 278
+TET G + C +W+ L E+ ARQG I + VV + + V +
Sbjct: 346 MTETYGPLTKCYVMPEWDDLPPQEKYAKMARQGHGFITSLPIRVVKQDQPGGVLVDVAKN 405
Query: 279 GQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVII 338
GQ GEIVF Y KD E + + ++GD+ V H DG +I DR+KD+II
Sbjct: 406 GQEIGEIVFFGNLCAKEYYKDPEATRKLF-EGGGLHSGDLAVWHPDGSAQILDRAKDIII 464
Query: 339 SGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEF 398
SGGENISS +ES+L +P I E +V+ D WG+RP A+V++K K E +I +
Sbjct: 465 SGGENISSVALESMLVQHPDILEAGVVSVPDSHWGERPKAYVTVK--EGKSLVGEDVINW 522
Query: 399 CR--ARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + + +M + V + ELPKT+TGKI+K LR+
Sbjct: 523 AKHQSNISKFMVPREVEVVKELPKTSTGKIKKNDLRQ 559
>gi|448563686|ref|ZP_21635613.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
gi|445717625|gb|ELZ69339.1| acyl-CoA synthetase [Haloferax prahovense DSM 18310]
Length = 538
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/449 (34%), Positives = 229/449 (51%), Gaps = 32/449 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + LL S + +++ DYQ A + +P V + +D +A +
Sbjct: 89 RLTTEDYEYLLSDSGASVVYADYQY------AGKIEAVRDDVPAEVFVTNDPAAVDGDWL 142
Query: 65 GHPNF-------KWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
F + +PE SE + + +NYTSGTT PKGV HR + I I
Sbjct: 143 DFEAFLDEADADDYERPEMSEDELITINYTSGTTGDPKGVCRTHRTESLHAQLVTIHHHI 202
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+ V+LWTLPMFH NGW + + + G ++C R VD ++ I+ V+ C A V
Sbjct: 203 SDDDVYLWTLPMFHVNGWGHIYAVTGRGAKHVCTRGVDAEQVFDAIRDEDVSFFCCAPTV 262
Query: 177 LNMLSS-SPSTKPL---DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVV 231
L++L + P D PV++ +G++ P+A + TES + + YG TET +
Sbjct: 263 LSILREYAEEHDPAYAGDNPVRVTAAGSAAPSATIRHTESEFDWEFTQLYGATETGPLIA 322
Query: 232 SCAWKSQWNTLADTE---RARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ S N L E R LK RQGV +G D+ VV E G V D + GE+V R
Sbjct: 323 T----SDANRLIPDEGGLRFSLKQRQGVAPLG-TDLRVVD-EDGEQVPRDDATIGEVVVR 376
Query: 289 SGSIMLGYLK--DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+M Y D+ + R W++TGD+ VV+ DG + I+DR KD+IISGGENISS
Sbjct: 377 GNQVMEKYWNKPDETHDAFNDRLEGWYHTGDLAVVNEDGMIAIQDRKKDIIISGGENISS 436
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLP 404
E+E L+ + A+ +VA++ + WG+ P AFV + P T E + E+ R RL
Sbjct: 437 VELEDTLFDHDAVGDVAVIPAPSEKWGETPKAFVVPANGDVENPGITAEELAEYTRDRLA 496
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y A + +E+PKTATGKIQK+ LR+
Sbjct: 497 GYKAIREFEFVEEIPKTATGKIQKYELRK 525
>gi|448398889|ref|ZP_21570244.1| AMP-dependent synthetase and ligase [Haloterrigena limicola JCM
13563]
gi|445670362|gb|ELZ22964.1| AMP-dependent synthetase and ligase [Haloterrigena limicola JCM
13563]
Length = 537
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 135/374 (36%), Positives = 205/374 (54%), Gaps = 15/374 (4%)
Query: 71 WVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMF 129
+ +PE +E + + +NYTSGTT PKGV HR I ++ + + V+LWTLPMF
Sbjct: 155 YDRPEMAEDEIITINYTSGTTGDPKGVCRTHRCETIHAYLTVGHQNLSDDDVYLWTLPMF 214
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-----SSSP 184
H NGW + + + +G +IC R +D I+ ++ V+++CGA VLNML + P
Sbjct: 215 HANGWGHIFAVTGIGAKHICTRGIDAGEIFETVRSEDVSYMCGAPTVLNMLIEYYEQNEP 274
Query: 185 STKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLA 243
T D V++ T+G++PP A + E G+ + H YG TET + + + + +
Sbjct: 275 ETTG-DADVRLATAGSAPPEATIRTVEDEFGWYMKHVYGATETGPLITTSDARRHFEDDS 333
Query: 244 DTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
D +R R+K RQG+ +G ++ VV E G V D ++ GE+V R IM Y E +
Sbjct: 334 D-DRFRIKKRQGLAYLG-TEIRVVD-EDGNDVPRDDETLGEVVVRGNQIMEKYWGKPEVT 390
Query: 304 SLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
D +++ GD+ + +G L I+DR KD+IISGGENISS E+E L+ +P +++
Sbjct: 391 EEAFSDRIEGYYHMGDLATIDENGMLSIQDRKKDIIISGGENISSIELEDTLFDHPEVSD 450
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIEDELP 419
VA++ WG+ P AFV P TE + EF R L Y + + +LP
Sbjct: 451 VAVIPAPSDEWGETPKAFVVPASGDPTDPGVTESELEEFTRENLAGYKTVRRIEFVKQLP 510
Query: 420 KTATGKIQKFVLRE 433
TATGK+QK+ LRE
Sbjct: 511 TTATGKVQKYELRE 524
>gi|291009581|ref|ZP_06567554.1| medium-chain acyl-CoA ligase [Saccharopolyspora erythraea NRRL
2338]
Length = 520
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 220/437 (50%), Gaps = 42/437 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD---VSATSS 61
RL V ++ HS + +L VD L + T VL DD +T+
Sbjct: 107 RLAPAEVRYIVEHSGADVLLVDPDLR-------HLLDTATAKHTFVLGEDDDAVFGSTAE 159
Query: 62 PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPV 121
P +W E+ LNYTSGTT+ PKGV HR L+I + + + V
Sbjct: 160 PA------RWDGDEAA--TATLNYTSGTTARPKGVQLTHRNLWINATVFGLHTTLNDDDV 211
Query: 122 FLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV----L 177
L TLPMFH NGW + + +GG ++ LRKVD I I+ HGVT +C A V L
Sbjct: 212 LLHTLPMFHCNGWGMPYALTGLGGRHVVLRKVDGAEILRRIRDHGVTILCAAPAVVTAAL 271
Query: 178 NMLSSSPSTKPLDRPVKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTETAGFVVSCAWK 236
+ P V+I+ +GA PP + R E LG+ YGLTETA + +
Sbjct: 272 DAAKDWEGEIPGRDRVRIVVAGAPPPTRTIQRVREELGWEFIQIYGLTETAPLLTVNRMR 331
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
S+W L TE+ARL R G P G+ + D GE++ +S + GY
Sbjct: 332 SEWAELDGTEQARLLGRAGA------------PAIGVRIAVD--DGGEVLAQSNHNLDGY 377
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
++ + ++ +++ WF+TGD G VH DGYL I DR KDVII+GGEN+SS EVE L +
Sbjct: 378 WENPQETAR-VQEGGWFHTGDGGTVH-DGYLTIADRKKDVIITGGENVSSIEVEDALTSH 435
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
PA+ EVA++ D+ WG+ A V + T E +I CR L Y K V D
Sbjct: 436 PAVREVAVIGIPDEKWGELVTALVVTE---DDTTTAEDLIGHCREHLAGYKCPKRVDFID 492
Query: 417 ELPKTATGKIQKFVLRE 433
ELP+TATGKIQKF LRE
Sbjct: 493 ELPRTATGKIQKFKLRE 509
>gi|448608048|ref|ZP_21659887.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
gi|445737090|gb|ELZ88628.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
Length = 538
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 156/449 (34%), Positives = 229/449 (51%), Gaps = 32/449 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + LL S + +++ DYQ A + +P V + +D +A +
Sbjct: 89 RLTTEDYEYLLSDSGASVVYADYQY------AGKIEAVRDDVPAEVFVTNDPAAVDGDWL 142
Query: 65 GHPNF-------KWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
F + +PE SE + + +NYTSGTT PKGV HR + I I
Sbjct: 143 DFETFLDEADADDYERPEMSEDELITINYTSGTTGDPKGVCRTHRTESLHAQLVTIHHHI 202
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+ V+LWTLPMFH NGW + + + G ++C R VD ++ I V+ C A V
Sbjct: 203 ADDDVYLWTLPMFHVNGWGHIYAVTGRGAKHVCTRGVDAERVFDAITGEDVSFFCCAPTV 262
Query: 177 LNMLSS-SPSTKPL---DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVV 231
L++L + P D PV++ +G++ P+A + TES G+ + YG TET +
Sbjct: 263 LSILREYAEEHDPAYAGDNPVRVTAAGSAAPSATIRHTESEFGWEFTQLYGATETGPLIA 322
Query: 232 SCAWKSQWNTLADTE---RARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ S N L E R LK RQGV +G D+ VV + G V D + GE+V R
Sbjct: 323 T----SDANRLIPDEGGLRFSLKQRQGVAPLG-TDLRVVD-DDGEQVPRDDATIGEVVVR 376
Query: 289 SGSIMLGYLK--DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+M Y D+ + R W++TGD+ VV+ DG + I+DR KD+IISGGENISS
Sbjct: 377 GNQVMEKYWNKPDETHDAFNDRLEGWYHTGDLAVVNEDGMIAIQDRKKDIIISGGENISS 436
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLP 404
E+E L+ + A+ +VA++ + WG+ P AFV + P T E + E+ R RL
Sbjct: 437 VELEDALFDHDAVGDVAVIPAPSEKWGETPKAFVVPANGDVENPGVTAEDLTEYTRDRLA 496
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y A + +E+PKTATGKIQK+ LR+
Sbjct: 497 GYKAIREFEFVEEIPKTATGKIQKYELRK 525
>gi|448574914|ref|ZP_21641437.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
gi|445732593|gb|ELZ84175.1| acyl-CoA synthetase [Haloferax larsenii JCM 13917]
Length = 536
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 149/438 (34%), Positives = 223/438 (50%), Gaps = 30/438 (6%)
Query: 14 LLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPV-------LIHDDVSATSSPTVGH 66
+L ++ K ++ DY + P+ + L D+V A S+
Sbjct: 98 MLSDADVKAIYADYAFAEKIEQIRDEIPTEVFITNDTDEVDGEWLDFDEVVAEST----- 152
Query: 67 PNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWT 125
+ +PE SE + + +NYTSGTT PKGV HR + + I + V+LWT
Sbjct: 153 ---DYDRPEMSEDEIITINYTSGTTGDPKGVCRTHRAETLHAYLISMHQEISDDDVYLWT 209
Query: 126 LPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML----- 180
LPMFH NGW + + + G ++C R V+ + I+ V+++C A VLN+L
Sbjct: 210 LPMFHVNGWGHIYAITGHGAKHVCTRGVEAADVLDAIRTEDVSYLCAAPTVLNILMKHYR 269
Query: 181 SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQW 239
PV+ T+GA+PP A + E G+ + H YG TET + + K
Sbjct: 270 DEGGVETTGGSPVRAATAGAAPPEATIRTVEDEFGWRLMHVYGATETGPLITTSEAKRFL 329
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKD 299
+ D +R +K RQG+ +G D+ VV + G V D Q+ GEIV +M Y
Sbjct: 330 D--GDADRFSIKKRQGIGYLG-TDVRVVD-DDGEDVPWDDQTIGEIVVAGNQVMDKYWNK 385
Query: 300 QEGS--SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNP 357
E + + R +++ GD+ VV +G++ I+DR KD+IISGGENISS E+E L+ +
Sbjct: 386 PEETEEAFTARREGYYHMGDLAVVDENGFISIQDRKKDIIISGGENISSIELEDTLFDHE 445
Query: 358 AINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIE 415
+++VA++ WG+ P AFV S P TE A+I+FCR R+ Y K +
Sbjct: 446 QVSDVAVIPVPSDEWGESPKAFVVPISGDSDNPGVTETALIDFCRDRIATYKVPKEIEFV 505
Query: 416 DELPKTATGKIQKFVLRE 433
+ELPKTATGKIQK+ LRE
Sbjct: 506 EELPKTATGKIQKYELRE 523
>gi|448368405|ref|ZP_21555357.1| AMP-dependent synthetase and ligase [Natrialba aegyptia DSM 13077]
gi|445652235|gb|ELZ05135.1| AMP-dependent synthetase and ligase [Natrialba aegyptia DSM 13077]
Length = 560
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 141/391 (36%), Positives = 207/391 (52%), Gaps = 20/391 (5%)
Query: 54 DDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLID 113
DD+ A ++ P E D + +NYTSGTT PKGV HR + I
Sbjct: 166 DDLLADATAEYDRPTM------DEDDIITINYTSGTTGDPKGVCRTHRTETLHAYLISIH 219
Query: 114 WRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGA 173
I ++ +LWTLPMFH NGW + + + +G ++C R VD I I+ V+++CGA
Sbjct: 220 QDITDEDTYLWTLPMFHVNGWGHIYAVTGMGAKHVCTRGVDAEWILETIREEDVSYLCGA 279
Query: 174 LVVLNML------SSSPSTKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTET 226
VLNML +SSP V+I T+G++PP A + E G+ + H YG TET
Sbjct: 280 PTVLNMLIDHYEDASSPPETSGASDVRIATAGSAPPEATIRTVEDEFGWQLKHVYGATET 339
Query: 227 AGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIV 286
+ + + ++ +D +R +K RQG+ +G ++ VV E G V D + GE+V
Sbjct: 340 GPLITTSDARRHFDADSD-DRFAIKKRQGLGFLG-TEVRVVD-EDGNDVPRDKTTIGEVV 396
Query: 287 FRSGSIMLGYLKDQE--GSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENI 344
R +M Y E + R + +F+TGD+ V G + I+DR KD+IISGGENI
Sbjct: 397 VRGNQVMEEYWNKPEVTAEAFSERLDGYFHTGDLATVDERGMIAIQDRKKDIIISGGENI 456
Query: 345 SSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRAR 402
SS E+E L+ +P + +VA++ + WG+ P AFV P + + +IEF R
Sbjct: 457 SSIELEDTLFDHPQVADVAVIPSPSEQWGETPKAFVVPSSGDVNDPGVSADELIEFTREN 516
Query: 403 LPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
L Y A + V +LP TATGK+QK+ LRE
Sbjct: 517 LAGYKAVQRVEFVTQLPTTATGKVQKYELRE 547
>gi|448379026|ref|ZP_21560990.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
gi|445665588|gb|ELZ18264.1| AMP-dependent synthetase and ligase [Haloterrigena thermotolerans
DSM 11522]
Length = 537
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 205/377 (54%), Gaps = 21/377 (5%)
Query: 71 WVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMF 129
+ +PE SE + + +NYTSGTT PKGV HR I + I + +LWTLPMF
Sbjct: 155 YDRPEMSEDEIITINYTSGTTGDPKGVCRTHRCETIHAYLLVGHQEITDDDTYLWTLPMF 214
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-----SSSP 184
H NGW + + + +G T++C R VD I+ ++ V+++CGA VLNML P
Sbjct: 215 HANGWGHIFAVTGIGATHVCTRGVDAAEIFETVRAEDVSYMCGAPTVLNMLIDYYRDHEP 274
Query: 185 STKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLA 243
T D V++ T+G++PP A + E G+ + H YG TET + + + + +
Sbjct: 275 ETTG-DTDVRLATAGSAPPEATIRTVEDEFGWYLKHVYGATETGPLITTSDARRHFEADS 333
Query: 244 DTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
D +R R+K RQG+ +G ++ VV E G V D ++ GE+V R IM Y E +
Sbjct: 334 D-DRFRIKKRQGLAYLG-TEIRVVD-EDGEDVPRDDETLGEVVVRGNQIMEKYWNKPEAT 390
Query: 304 SLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
D +++TGD+ V +G + I+DR KD+IISGGENISS E+E L+ + A+ +
Sbjct: 391 EEAFTDRVEGYYHTGDLATVDENGMIAIQDRKKDIIISGGENISSIELEDALFDHEAVAD 450
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKPTE-----EAIIEFCRARLPHYMAHKSVIIED 416
A++ WG+ P AFV + PT+ E + F R +L Y A + V
Sbjct: 451 AAVIPAPSDEWGETPKAFVVPS---NGDPTDPPVSPEELTAFTREQLAGYKAVRRVEFVA 507
Query: 417 ELPKTATGKIQKFVLRE 433
ELP TATGK+QK+ LR+
Sbjct: 508 ELPTTATGKVQKYELRQ 524
>gi|448620996|ref|ZP_21668073.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
gi|445756046|gb|EMA07422.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
Length = 538
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/449 (34%), Positives = 229/449 (51%), Gaps = 32/449 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + LL S + +++ DYQ A + +P V + +D +A +
Sbjct: 89 RLTTEDYEYLLSDSGASVVYADYQY------AGKIEAVRDDVPAEVFVTNDPAAVDGDWL 142
Query: 65 GHPNF-------KWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI 116
F + +PE SE + + +NYTSGTT PKGV HR + I I
Sbjct: 143 DFEAFLDEADADDYERPEMSEDELITINYTSGTTGDPKGVCRTHRTESLHAQLVTIHHHI 202
Query: 117 PNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV 176
+ V+LWTLPMFH NGW + + + G ++C R VD ++ I V+ C A V
Sbjct: 203 ADDDVYLWTLPMFHVNGWGHIYAVTGRGAKHVCTRGVDAEQVFDAIATEDVSFFCCAPTV 262
Query: 177 LNMLSS-SPSTKPL---DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVV 231
L++L + P D PV++ +G++ P+A + TES G+ + YG TET +
Sbjct: 263 LSILREYAEEHDPAYAGDNPVRVTAAGSAAPSATIRHTESEFGWEFTQLYGATETGPLIA 322
Query: 232 SCAWKSQWNTLADTE---RARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFR 288
+ S N L E R LK RQGV +G D+ VV + G V D + GE+V R
Sbjct: 323 T----SDANRLIPDEGGLRFSLKQRQGVAPLG-TDLRVVD-DDGERVPRDDATIGEVVVR 376
Query: 289 SGSIMLGYLK--DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISS 346
+M Y D+ + R W++TGD+ VV+ DG + I+DR KD+IISGGENISS
Sbjct: 377 GNQVMEKYWNKPDETHDAFNDRLEGWYHTGDLAVVNEDGMIAIQDRKKDIIISGGENISS 436
Query: 347 AEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLP 404
E+E L+ + A+ +VA++ + WG+ P AFV + P T E + E+ R RL
Sbjct: 437 VELEDALFDHDAVGDVAVIPAPSEKWGETPKAFVVPANGDVENPGVTAEELTEYTRDRLA 496
Query: 405 HYMAHKSVIIEDELPKTATGKIQKFVLRE 433
Y A + +E+PKTATGKIQK+ LR+
Sbjct: 497 GYKAIREFEFVEEIPKTATGKIQKYELRK 525
>gi|134099594|ref|YP_001105255.1| medium-chain acyl-CoA ligase [Saccharopolyspora erythraea NRRL
2338]
gi|133912217|emb|CAM02330.1| medium-chain acyl-CoA ligase [Saccharopolyspora erythraea NRRL
2338]
Length = 508
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 163/437 (37%), Positives = 220/437 (50%), Gaps = 42/437 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDD---VSATSS 61
RL V ++ HS + +L VD L + T VL DD +T+
Sbjct: 95 RLAPAEVRYIVEHSGADVLLVDPDLR-------HLLDTATAKHTFVLGEDDDAVFGSTAE 147
Query: 62 PTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPV 121
P +W E+ LNYTSGTT+ PKGV HR L+I + + + V
Sbjct: 148 PA------RWDGDEAA--TATLNYTSGTTARPKGVQLTHRNLWINATVFGLHTTLNDDDV 199
Query: 122 FLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVV----L 177
L TLPMFH NGW + + +GG ++ LRKVD I I+ HGVT +C A V L
Sbjct: 200 LLHTLPMFHCNGWGMPYALTGLGGRHVVLRKVDGAEILRRIRDHGVTILCAAPAVVTAAL 259
Query: 178 NMLSSSPSTKPLDRPVKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTETAGFVVSCAWK 236
+ P V+I+ +GA PP + R E LG+ YGLTETA + +
Sbjct: 260 DAAKDWEGEIPGRDRVRIVVAGAPPPTRTIQRVREELGWEFIQIYGLTETAPLLTVNRMR 319
Query: 237 SQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGY 296
S+W L TE+ARL R G P G+ + D GE++ +S + GY
Sbjct: 320 SEWAELDGTEQARLLGRAGA------------PAIGVRIAVD--DGGEVLAQSNHNLDGY 365
Query: 297 LKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMN 356
++ + ++ +++ WF+TGD G VH DGYL I DR KDVII+GGEN+SS EVE L +
Sbjct: 366 WENPQETAR-VQEGGWFHTGDGGTVH-DGYLTIADRKKDVIITGGENVSSIEVEDALTSH 423
Query: 357 PAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIED 416
PA+ EVA++ D+ WG+ A V + T E +I CR L Y K V D
Sbjct: 424 PAVREVAVIGIPDEKWGELVTALVVTE---DDTTTAEDLIGHCREHLAGYKCPKRVDFID 480
Query: 417 ELPKTATGKIQKFVLRE 433
ELP+TATGKIQKF LRE
Sbjct: 481 ELPRTATGKIQKFKLRE 497
>gi|313127059|ref|YP_004037329.1| acyl-CoA synthetase [Halogeometricum borinquense DSM 11551]
gi|448288473|ref|ZP_21479672.1| acyl-CoA synthetase [Halogeometricum borinquense DSM 11551]
gi|312293424|gb|ADQ67884.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II
[Halogeometricum borinquense DSM 11551]
gi|445569624|gb|ELY24196.1| acyl-CoA synthetase [Halogeometricum borinquense DSM 11551]
Length = 537
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 151/442 (34%), Positives = 231/442 (52%), Gaps = 37/442 (8%)
Query: 14 LLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPV-------LIHDDVSATSSPTVGH 66
+L ++ K ++ DY+ + A P+ T + L D++ A S+
Sbjct: 98 ILTDADVKAVYADYEYAEKIEAIRDDVPTETFVTNDTAQVDGDWLSFDELIAEST----- 152
Query: 67 PNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRG----LFIITVSSLIDWRIPNQPV 121
+ +PE +E + + +NYTSGTT PKGV HR ++IT I + V
Sbjct: 153 ---DYDRPEMTEDELITINYTSGTTGDPKGVCRTHRTETLHAYLITSHQ----HISDDDV 205
Query: 122 FLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLS 181
+LWTLPMFH NGW + + + G ++C R VD I+ ++ V+++C A VLNML
Sbjct: 206 YLWTLPMFHVNGWGHIYAVTGNGAKHVCTRGVDAEWIFDTVREEHVSYMCAAPTVLNMLM 265
Query: 182 SSPSTK-----PLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAW 235
+ D PV+ T+GA+PP A + E G+ + H YG TET G +++ +
Sbjct: 266 DYYDKQGGVETTGDVPVRAATAGAAPPEATIRTVEDEFGWYLMHVYGATET-GPLITTSD 324
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
++ +R +K +QG+ +G D+ VV E G V DGQ+ GEIV R +M
Sbjct: 325 ARRFFDDDSDDRFAVKKQQGIGYLG-TDVRVVD-EDGEDVARDGQTVGEIVVRGNQVMDR 382
Query: 296 YLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVL 353
Y E + D +++ GD+ VV +G++ I+DR KD+IISGGENISS E+E L
Sbjct: 383 YWNKPEATDEAFTDRLEGYYHMGDLAVVDENGFITIQDRKKDIIISGGENISSIELEDTL 442
Query: 354 YMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKS 411
+ + A+ +VA++ + WG+ P AFV + P T + +I + R R+ Y K
Sbjct: 443 FDHDAVGDVAVIPMPSEEWGESPKAFVVPAHGDADDPGVTADDLIAYTRERIATYKVPKE 502
Query: 412 VIIEDELPKTATGKIQKFVLRE 433
+ ELPKTATGKIQK+ LRE
Sbjct: 503 IEFVTELPKTATGKIQKYELRE 524
>gi|448625228|ref|ZP_21670995.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
gi|445748990|gb|EMA00436.1| acyl-CoA synthetase [Haloferax denitrificans ATCC 35960]
Length = 540
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 214/408 (52%), Gaps = 24/408 (5%)
Query: 46 LPKPVLIHDDVSATSSPTVGH---------PNFKWVQPE-SEWDPMALNYTSGTTSSPKG 95
+P + + +D + T G + + +PE E D + +NYTSGTT PKG
Sbjct: 124 IPTEIFVTNDPEKAAESTDGEWLDFDELVAESTDYERPEMDEDDIITINYTSGTTGDPKG 183
Query: 96 VVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDV 155
V HR I + I + V+LWTLPMFH NGW + + + G ++C R V+
Sbjct: 184 VCRTHRAETIHAYLISMHQDIADDDVYLWTLPMFHVNGWGHIYAITGHGAKHVCTRGVEA 243
Query: 156 PIIYSVIKHHGVTHICGALVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRT 210
+ I+ V+++C A VLN+L PV+ T+GA+PP A +
Sbjct: 244 EAVLDAIRDEDVSYLCAAPTVLNILMKHYREEGGVETTGASPVRAATAGAAPPEATIRTV 303
Query: 211 ES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP 269
E G+ + H YG TET G +++ + ++ T D +R +K +QG+ +G D+ VV
Sbjct: 304 EDEFGWRLMHVYGATET-GPLITTSEAGRYLTDGD-DRFGVKKKQGIGYLG-TDVRVVD- 359
Query: 270 ETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYL 327
E G V D QS GEIV +M Y E + + R +++ GD+ VV +G++
Sbjct: 360 EDGDDVPRDDQSVGEIVVAGNQVMEKYWNKPEETEEAFSARLEGYYHMGDLAVVDENGFI 419
Query: 328 EIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELS 387
I+DR KD+IISGGENISS E+E L+ + A+ +VA++ WG+ P AFV
Sbjct: 420 SIQDRKKDIIISGGENISSIELEDTLFDHDAVADVAVIPVPSDEWGESPKAFVVPTSGDP 479
Query: 388 KKP--TEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
P T +A+IEFCR R+ Y K + ELPKTATGKIQK+ LRE
Sbjct: 480 DAPGVTGQALIEFCRGRIATYKVPKEIEFVAELPKTATGKIQKYELRE 527
>gi|392406230|ref|YP_006442840.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
gi|315024192|gb|ADT71673.1| putative fatty acid-CoA ligase [Mycobacterium chubuense NBB4]
gi|390619366|gb|AFM20515.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
chubuense NBB4]
Length = 510
Score = 231 bits (590), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 228/437 (52%), Gaps = 40/437 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ-SSPLALAALSLFPSNTILPKPVLIHDDV--SATSS 61
RL VS ++ S+S +L VD + PLA A P +L + DDV S
Sbjct: 94 RLQPSEVSYIVDDSQSDVLLVDPELDGPLADVAA---PHRLVLGER---SDDVLLDFDSE 147
Query: 62 PTVGHPNFKWVQPESEWDPMA-LNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP 120
P W P+ D A LNYTSGTT PKGV HR ++I V+ + ++ +
Sbjct: 148 PQ------PWSHPDE--DAFATLNYTSGTTGKPKGVCLTHRNIWINAVTFGMHMQLGDDD 199
Query: 121 VFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML 180
V + LPMFH NGW + +G + LRKVD I + HGVT +CGA V NM+
Sbjct: 200 VLMHVLPMFHCNGWGMPYASTGLGVEQVVLRKVDGAEILRRVDAHGVTLMCGAPTVWNMV 259
Query: 181 SSSPSTKPLDRP----VKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCAW 235
+ P + P V+I+ +GA PP+ + R E LG+ + YGL+ETA +
Sbjct: 260 LDAAQDWPGEIPGRGRVRIVCAGAPPPSLTIARIERELGWQFNQIYGLSETAPLLTVNRP 319
Query: 236 KSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLG 295
+ +++ L+ +RA+ R GV ++G T + V D GE++ S ++M
Sbjct: 320 RREYDNLSLGDRAKKLGRAGVPSLG----------TSLRVDED----GEVLAASNTVMAE 365
Query: 296 YLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYM 355
Y ++ + + D+ WF+TGD G + DGYL I DR KDVII+GGEN+SS EVE L
Sbjct: 366 YWNKKDETDAAL-DSGWFHTGDGGALGVDGYLTITDRKKDVIITGGENVSSIEVEDALLG 424
Query: 356 NPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIE 415
+PAI +VA++A D WG+ A V + + +IEF + +L HY A K VI
Sbjct: 425 HPAIADVAVIATPDDKWGELVTAIVVPRQ--GETLAASHVIEFAKTKLAHYKAPKKVIFR 482
Query: 416 DELPKTATGKIQKFVLR 432
++P TATGK QKF LR
Sbjct: 483 TDIPYTATGKKQKFKLR 499
>gi|340520671|gb|EGR50907.1| predicted protein [Trichoderma reesei QM6a]
Length = 586
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 213/377 (56%), Gaps = 24/377 (6%)
Query: 76 SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQP--VFLWTLPMFHENG 133
+E D +A+ +TSGTTS PKGVV +RG ++ + ++I+ + NQ +LWTLPMFH G
Sbjct: 207 NEDDMIAIPFTSGTTSRPKGVVFTNRGAYLACMGNIIESGL-NQGRCKYLWTLPMFHAMG 265
Query: 134 WSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPV 193
W++ W + AV G N+CLRK+D P+I+ ++K +TH A V +L +S + L
Sbjct: 266 WTFPWAVVAVRGLNVCLRKIDYPLIWKLLKELRITHFNAAPTVNTLLVASKEAEKLPHEC 325
Query: 194 KILTSGASPPAAVLLRT-----------ESLGFVVSHSYGLTETAGFVVSCAWKSQWNTL 242
++ T ASPP+A L +L + H YG+TET G + C +W+ L
Sbjct: 326 RV-TVAASPPSAHLFEQMASNLKRATTCTNLNLMPVHVYGMTETYGPLTKCYVLPEWDDL 384
Query: 243 ADTERARLKARQGVRTIGLADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLK 298
E+ ARQG I + +V P+ + V+ +G+ GEIVF Y K
Sbjct: 385 PPHEKFAKMARQGHGFITSLPIRIVKPDQPGGVLVDVEKNGKEIGEIVFFGNICAKEYYK 444
Query: 299 DQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPA 358
D E + + ++GD+ V H DG +I DR+KD+IISGGENISS +ES+L +P
Sbjct: 445 DPEATRKLF-EGGGLHSGDLAVWHPDGSAQILDRAKDIIISGGENISSVALESMLVEHPD 503
Query: 359 INEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIED 416
I E +V+ D WG+RP A++++K K E +I++ + + + +M + V I D
Sbjct: 504 ILEAGVVSVPDSHWGERPKAYITVKE--GKSLVGEDVIDWAKHQSSISKFMVPREVEIVD 561
Query: 417 ELPKTATGKIQKFVLRE 433
ELPKT+TGKI+K VLRE
Sbjct: 562 ELPKTSTGKIKKNVLRE 578
>gi|311744458|ref|ZP_07718259.1| AMP-binding domain protein [Aeromicrobium marinum DSM 15272]
gi|311312263|gb|EFQ82179.1| AMP-binding domain protein [Aeromicrobium marinum DSM 15272]
Length = 506
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 142/368 (38%), Positives = 203/368 (55%), Gaps = 35/368 (9%)
Query: 78 WDP-----MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR--IPNQPVFLWTLPMFH 130
W+P +NYTSGTT+ PKGV HR L+ T +++ W+ + ++ V+L TLPMFH
Sbjct: 151 WEPDENATATINYTSGTTARPKGVEQTHRALW--TNATVFGWQASVSDRDVYLHTLPMFH 208
Query: 131 ENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLD 190
NGW +G+ +GG +I LR+VD I I HGVT++C A VL M+ + T +
Sbjct: 209 CNGWGQVYGVTGMGGRHIVLRQVDGAEILRRIAEHGVTYLCCAPAVLAMVLDALETWEGE 268
Query: 191 RP----VKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADT 245
P V+ + +GA PP + R + LG+ YGLTETA + + +W+ L
Sbjct: 269 VPGRDRVRCVVAGAPPPTRTIERVRAELGWEFIQIYGLTETAPLLTMSRMREEWDDLEAP 328
Query: 246 ERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSL 305
E+ARL R G P S+ D GEI+ RS +++ GY + + ++
Sbjct: 329 EQARLLGRAGA------------PALSTSIMLD--DSGEILARSNTVLQGYWDNPDATTE 374
Query: 306 CMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALV 365
+ DWF+TGD G + DGY+ I DR KDVIISGGEN+SS EVE L + A+ EVA++
Sbjct: 375 ALA-GDWFHTGD-GGSYEDGYVTIADRKKDVIISGGENVSSIEVEDALASHDAVREVAVI 432
Query: 366 AQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGK 425
D+ WG+ A V ++ T + +I CR RL Y K + DEL +TATGK
Sbjct: 433 GTPDERWGELVTALV-----VADGVTADELIAHCRERLAGYKCPKRIEFRDELARTATGK 487
Query: 426 IQKFVLRE 433
+QKF LR+
Sbjct: 488 LQKFKLRQ 495
>gi|154312808|ref|XP_001555731.1| hypothetical protein BC1G_05105 [Botryotinia fuckeliana B05.10]
gi|347839764|emb|CCD54336.1| similar to acyl CoA synthetase [Botryotinia fuckeliana]
Length = 582
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 211/373 (56%), Gaps = 14/373 (3%)
Query: 73 QPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIP---NQPVFLWTLPMF 129
Q + E +A+ +TSGTT+ PKGVV+ HRG ++ + ++++ + + +LWTLPMF
Sbjct: 203 QADDEDGTIAIPFTSGTTAKPKGVVYTHRGAYLAAMGNVVESGLNFHRGRCGYLWTLPMF 262
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPL 189
H GW++ W + AV GT+ CLRK+D P+I++++K +TH A V +L +S L
Sbjct: 263 HAVGWTFPWAVTAVRGTHFCLRKIDYPLIWNLLKSQPITHFNAAPTVNTLLCASKEAAKL 322
Query: 190 DRPVKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERA 248
PV++ T ASPP A L T ++ + H YG+TET G + W + E+
Sbjct: 323 PNPVRV-TVAASPPTAHLFETMTNVNLIPVHVYGMTETYGPITKGYHMPIWEDIPLKEKY 381
Query: 249 RLKARQGVRTIGLADMDVVHPETG----MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSS 304
ARQG + ++ +V P+ + V DG+ GEI+F GY D+E +
Sbjct: 382 NRMARQGHGFLTSLNLRIVKPDQPDDKLIDVARDGKEIGEIIFLGNICAKGYYNDEEATR 441
Query: 305 LCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVAL 364
++GD+ V H DG +I DR+KD+IISGGENISS +E++L + I E +
Sbjct: 442 KLFAGGA-LHSGDLAVWHEDGSAQILDRAKDIIISGGENISSVALEAMLVQHEGILEAGV 500
Query: 365 VAQRDKFWGKRPCAFVSLK--WELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPK 420
VA D+ WG+ P AFV+++ ++ E ++ + + + + +M + VI+ ELPK
Sbjct: 501 VAVVDEKWGECPVAFVTVREGGAGNEGLKGEDVVRWAKEESSISRFMVPREVIVVKELPK 560
Query: 421 TATGKIQKFVLRE 433
T+TGK+QK VLRE
Sbjct: 561 TSTGKVQKNVLRE 573
>gi|452208347|ref|YP_007488469.1| acyl-CoA synthetase [Natronomonas moolapensis 8.8.11]
gi|452084447|emb|CCQ37792.1| acyl-CoA synthetase [Natronomonas moolapensis 8.8.11]
Length = 531
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 201/370 (54%), Gaps = 18/370 (4%)
Query: 72 VQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFH 130
V+PE SE D ++NYTSGTT PKGVV HR + I + +LWTLPMFH
Sbjct: 157 VRPEISEDDDASINYTSGTTGDPKGVVRTHRTEHWHALVLNQHMEIRDDDNYLWTLPMFH 216
Query: 131 ENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPL- 189
NGW +++ + GGT++C R D + ++ + V+ +CGA VLN L T +
Sbjct: 217 CNGWGHTYAITGTGGTHVCQRTFDAEDTFERVREYDVSFMCGAPTVLNALIQHYETNDVE 276
Query: 190 ---DRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADT 245
DR V+I T+G++P A + E + + H YGLTETA + + +
Sbjct: 277 TTGDRDVRIATAGSAPATATIETVEDEFDWRIIHIYGLTETAPIITTSNSPRRL-----A 331
Query: 246 ERAR-LKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQE--G 302
ER R LK QG T+ D+ VV + G V +G + GEIV R +M YL E
Sbjct: 332 ERGRDLKINQGSETL-CTDVRVVDRD-GNDVPANGATVGEIVVRGNQVMDRYLNKPEITE 389
Query: 303 SSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEV 362
+ R +F+TGD+ + DG + I+DR KD+IISGGENISS EVE LY + I +
Sbjct: 390 EAFNERIEGYFHTGDLATIDEDGMVSIQDRKKDIIISGGENISSIEVEDALYDHEGILKA 449
Query: 363 ALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTA 422
A++ + WG+ P AFV + + TEE +I F + RL Y A SV D+ P+TA
Sbjct: 450 AVIPVPSEKWGETPKAFVVEQPDADL--TEEGVIGFVKGRLAGYKAPTSVEFVDDFPETA 507
Query: 423 TGKIQKFVLR 432
TGK+QK+ LR
Sbjct: 508 TGKVQKYELR 517
>gi|448605848|ref|ZP_21658441.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
gi|445741171|gb|ELZ92675.1| acyl-CoA synthetase [Haloferax sulfurifontis ATCC BAA-897]
Length = 540
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 148/408 (36%), Positives = 213/408 (52%), Gaps = 24/408 (5%)
Query: 46 LPKPVLIHDDVSATSSPTVGH---------PNFKWVQPE-SEWDPMALNYTSGTTSSPKG 95
+P + I +D + T G + + +PE E D + +NYTSGTT PKG
Sbjct: 124 IPTEIFITNDPEKAAESTDGEWLDFDELVAESTDYERPEMDEDDIVTINYTSGTTGDPKG 183
Query: 96 VVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDV 155
V HR I + I + V+LWTLPMFH NGW + + + G ++C R V+
Sbjct: 184 VCRTHRAETIHAYLISMHQDIADDDVYLWTLPMFHVNGWGHIYAITGHGAKHVCTRGVEA 243
Query: 156 PIIYSVIKHHGVTHICGALVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRT 210
+ I+ V+++C A VLN+L PV+ T+GA+PP A +
Sbjct: 244 EAVLDAIRDEDVSYLCAAPTVLNILMKHYREEGGIETTGASPVRAATAGAAPPEATIRTV 303
Query: 211 ES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP 269
E G+ + H YG TET G +++ + ++ T D +R +K +QG+ +G D+ VV
Sbjct: 304 EDEFGWRLMHVYGATET-GPLITTSEAGRYLTDGD-DRFGVKKKQGIGYLG-TDVRVVD- 359
Query: 270 ETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYL 327
E G V D QS GEIV +M Y E + + R +++ GD+ VV +G++
Sbjct: 360 EDGDDVPRDDQSVGEIVVAGNQVMEKYWNKPEETEEAFSARLEGYYHMGDLAVVDENGFI 419
Query: 328 EIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELS 387
I+DR KD+IISGGENISS E+E L+ + A+ +VA++ WG+ P AFV
Sbjct: 420 SIQDRKKDIIISGGENISSIELEDTLFDHDAVADVAVIPVPSDEWGESPKAFVVPTSGDP 479
Query: 388 KKP--TEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
P T EA+I FCR R+ Y K V ELPKTATGKIQK+ LRE
Sbjct: 480 DAPGVTAEALIAFCRERIATYKVPKEVEFVAELPKTATGKIQKYELRE 527
>gi|229491677|ref|ZP_04385498.1| medium-chain acyl-CoA ligase [Rhodococcus erythropolis SK121]
gi|229321358|gb|EEN87158.1| medium-chain acyl-CoA ligase [Rhodococcus erythropolis SK121]
Length = 514
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 203/359 (56%), Gaps = 28/359 (7%)
Query: 83 LNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR--IPNQPVFLWTLPMFHENGWSYSWGM 140
+NYTSGTT+ PKGV HR +I V + W+ + ++ V+L TLP FH NGW + +
Sbjct: 165 INYTSGTTARPKGVQLTHRSNWINAV--VFGWQATVTDRDVYLHTLPTFHANGWGHPFVT 222
Query: 141 AAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRP----VKIL 196
A+G ++ LRKVD I I+ HGVT++C A V++ + + T + P V+I+
Sbjct: 223 TAIGAKSVVLRKVDGAEILRRIEEHGVTYLCAAPAVVSAILDAAKTWEGEIPGRDRVRII 282
Query: 197 TSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQG 255
+GA PP + R LG+ YGLTET+ + +++W+ L E+ARL R G
Sbjct: 283 VAGAPPPTRTIERIRVDLGWEFIQIYGLTETSPLLTMSRMRAEWDDLPVPEQARLLGRAG 342
Query: 256 VRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRDNDWFYT 315
P G+ +K D GE++ RS I+ Y ++ E ++ + D DWF+T
Sbjct: 343 A------------PAIGVQIKVD--DTGEVLARSNHILASYWENPEATASALED-DWFHT 387
Query: 316 GDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKR 375
GD G DGY+ I DR KDVII+GGEN++S EVE L +PA+ EVA++ D+ WG+
Sbjct: 388 GD-GGTFDDGYVTIADRKKDVIITGGENVTSIEVEDALMSHPAVREVAVIGIPDEKWGEL 446
Query: 376 PCAFVSLKWELSKKPTEE-AIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
A V L + S +P +E A+I CR RL Y K V EL +TATGKIQKF LR+
Sbjct: 447 VTALVVL--DESVEPIDEAALIAHCRTRLAGYKCPKRVEFRSELARTATGKIQKFKLRQ 503
>gi|284167252|ref|YP_003405530.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
gi|284016907|gb|ADB62857.1| AMP-dependent synthetase and ligase [Haloterrigena turkmenica DSM
5511]
Length = 540
Score = 231 bits (588), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 139/376 (36%), Positives = 206/376 (54%), Gaps = 17/376 (4%)
Query: 70 KWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPM 128
++ +PE SE D + +NYTSGTT PKGV+ HR + I I + V+LWTLPM
Sbjct: 157 EYDRPEMSEDDVITINYTSGTTGDPKGVMRTHRTEALHAQLVTIHHEITDDDVYLWTLPM 216
Query: 129 FHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSS----- 183
FH NGW + + + +G ++C R VD I+ V+ +C A VL +
Sbjct: 217 FHVNGWGHIYAITGIGAKHVCTRGVDAETNLRQIREEDVSFLCCAPTVLTLFEEYLMDED 276
Query: 184 -PSTKPLDRPVKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTETAGFVVSCAWKSQWNT 241
P+T D P+++ +GA+PP +++ E G+ YG TET + + A + +
Sbjct: 277 VPTTG--DAPMRVTAAGAAPPESIIETVEEEFGWHFRQLYGATETGPLIGTSATRRLIDE 334
Query: 242 LADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQE 301
+ ER LK RQG+ + +++VV + G V D ++ GEIV R +M GY + E
Sbjct: 335 DS-AERFALKKRQGIAPLA-TEVEVVD-DDGEEVPWDDETIGEIVVRGNQVMDGYWEKPE 391
Query: 302 GSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAI 359
+ D WF+TGD+ VV+ DG + I+DR KD+I+SGGENISS E+E VL+ +P +
Sbjct: 392 ETEESFDDKREGWFHTGDLAVVNEDGLMAIQDRKKDIIVSGGENISSIELEDVLFDHPDV 451
Query: 360 NEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIEDE 417
+VA++ + WG+ P AFV + P T++ + + R RL Y V DE
Sbjct: 452 ADVAIIPTPSEKWGETPKAFVVPASGDPENPPVTKDDLTAYTRERLAGYKVVHRVEFVDE 511
Query: 418 LPKTATGKIQKFVLRE 433
LPKTATGK QK+ LRE
Sbjct: 512 LPKTATGKTQKYELRE 527
>gi|379736587|ref|YP_005330093.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Blastococcus
saxobsidens DD2]
gi|378784394|emb|CCG04062.1| Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Blastococcus
saxobsidens DD2]
Length = 511
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 153/434 (35%), Positives = 234/434 (53%), Gaps = 33/434 (7%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + V ++ HS +++L VD P AAL + + + P
Sbjct: 95 RLSPEEVEYIVGHSGARVLLVD----PELEAALKGVQAEHRFGTGEEYEQLLRFDTEPR- 149
Query: 65 GHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLW 124
W +P+ + +NYTSGTT+ PKGV HR +++ V+ + +I ++ V++
Sbjct: 150 -----PWSEPDEDV-TATINYTSGTTARPKGVQMTHRNIWVNAVTFGMHMQISDRDVYMH 203
Query: 125 TLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSP 184
TLPMFH NGW + MA VG + +RK+D I ++ HGVT + GA V N + +
Sbjct: 204 TLPMFHCNGWGLPYAMAGVGARQVVIRKIDGAEILRRVEQHGVTVMAGAPAVWNAVLEAA 263
Query: 185 STKPLDRP----VKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQW 239
+ + P V+I+ +GA PP+ + R E+ LG+ + YGLTETA + +++
Sbjct: 264 ADWDGEIPGRDRVRIIVAGAPPPSRTIARVEAELGWEFNQIYGLTETAPLLTINRPRAEH 323
Query: 240 NTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKD 299
+ L ERA+ +R G ++G + D GE++ RS +++ GY ++
Sbjct: 324 DDLDADERAKRLSRAGAPSLG--------------TRMDVSDTGEVLARSNTVLAGYWEN 369
Query: 300 QEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAI 359
+ S+ + D WF+TGD G + DGY+ I DR KDVII+GGEN+SS EVE V++ +PA+
Sbjct: 370 PDASAEAL-DGGWFHTGDGGSIDDDGYVTISDRKKDVIITGGENVSSIEVEDVVFSHPAV 428
Query: 360 NEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELP 419
E A++ D+ WG+ A V L ++ TE II CRARL Y + K V D+L
Sbjct: 429 AEAAVIGIPDEKWGEMVTAIVVLA--EGEQATEADIIAHCRARLAGYKSPKRVEFRDQLA 486
Query: 420 KTATGKIQKFVLRE 433
+TATGKIQKF LRE
Sbjct: 487 RTATGKIQKFKLRE 500
>gi|373248731|emb|CCD31844.1| AMP-dependent synthetase and ligase [Streptomyces albus subsp.
albus]
Length = 511
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 205/366 (56%), Gaps = 23/366 (6%)
Query: 74 PESEWDPMA-LNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHEN 132
PE + + A LNYTSGTT+ PKGV HR +++ + + + ++ V+L TLPMFH N
Sbjct: 152 PEPDENATATLNYTSGTTARPKGVQITHRNIWVNATTFALHAGVSDRDVYLHTLPMFHAN 211
Query: 133 GWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRP 192
GW + MAA+G I LRKVD I + HGVT +C A V+N + ++ + + P
Sbjct: 212 GWGMPFAMAALGVPQIVLRKVDGAEILRRVAAHGVTVMCAAPAVVNAVLAAAQSWEGEIP 271
Query: 193 ----VKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTER 247
V+I+ +GA PP + R E+ LG+ YGLTET+ + +++W+ L ER
Sbjct: 272 GRDRVRIIVAGAPPPTRTVARVEAELGWEFLQIYGLTETSPLLTVNRGRAEWDALPPEER 331
Query: 248 ARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCM 307
A R G P G+S++ QGE++ RS ++ GY + E S+ +
Sbjct: 332 AGKLVRAGA------------PALGVSLRT--SEQGEVLARSNVVLEGYWRQPEASAEAL 377
Query: 308 RDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQ 367
RD WF+TGD G + +GYL I DR KDVII+GGEN+SS EVE L+ +PA+ EVA++
Sbjct: 378 RDG-WFHTGDGGTLDEEGYLTISDRQKDVIITGGENVSSVEVEDALFSHPAVEEVAVIGV 436
Query: 368 RDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQ 427
D+ WG+ A V + E +I C+ RL Y A SV D L +TATGK+Q
Sbjct: 437 PDEKWGETIKALVVRAPDTEVDEAE--LIRHCKDRLAGYKAPTSVEFRDTLARTATGKLQ 494
Query: 428 KFVLRE 433
KF LRE
Sbjct: 495 KFKLRE 500
>gi|448541763|ref|ZP_21624387.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|448549939|ref|ZP_21628544.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|448554950|ref|ZP_21630990.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
gi|445707642|gb|ELZ59495.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-646]
gi|445712987|gb|ELZ64768.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-645]
gi|445717695|gb|ELZ69398.1| acyl-CoA synthetase [Haloferax sp. ATCC BAA-644]
Length = 540
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 213/408 (52%), Gaps = 24/408 (5%)
Query: 46 LPKPVLIHDDVSATSSPTVGH---------PNFKWVQPE-SEWDPMALNYTSGTTSSPKG 95
+P + + +D + T G + + +PE E D + +NYTSGTT PKG
Sbjct: 124 IPAEIFVTNDPEKAAESTDGEWLDFDELVAESTDYERPEMDEDDIITINYTSGTTGDPKG 183
Query: 96 VVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDV 155
V HR I + I + V+LWTLPMFH NGW + + + G ++C R V+
Sbjct: 184 VCRTHRAETIHAYLISMHQDIADDDVYLWTLPMFHVNGWGHIYAITGHGAKHVCTRGVEA 243
Query: 156 PIIYSVIKHHGVTHICGALVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRT 210
+ I+ V+++C A VLN+L PV+ T+GA+PP A +
Sbjct: 244 EAVLDAIRDEDVSYLCAAPTVLNILMKHYREEGGVETTGASPVRAATAGAAPPEATIRTV 303
Query: 211 ES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP 269
E G+ + H YG TET G +++ + ++ T D +R +K +QG+ +G D+ VV
Sbjct: 304 EDEFGWRLMHVYGATET-GPLITTSEAGRYLTDGD-DRFGVKKKQGIGYLG-TDVRVVD- 359
Query: 270 ETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYL 327
E G V D QS GEIV +M Y E + + R +++ GD+ VV +G++
Sbjct: 360 EDGNDVPRDDQSVGEIVVAGNQVMEKYWNKPEETEEAFSARLEGYYHMGDLAVVDENGFI 419
Query: 328 EIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELS 387
I+DR KD+IISGGENISS E+E L+ + A+ +VA++ WG+ P AFV
Sbjct: 420 SIQDRKKDIIISGGENISSIELEDTLFDHDAVADVAVIPVPSDEWGESPKAFVVPTSGDP 479
Query: 388 KKP--TEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
P T EA+I FCR R+ Y K + ELPKTATGKIQK+ LRE
Sbjct: 480 DAPGVTAEALIAFCRERIATYKVPKEIEFVAELPKTATGKIQKYELRE 527
>gi|448582034|ref|ZP_21645538.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
gi|445731682|gb|ELZ83265.1| acyl-CoA synthetase [Haloferax gibbonsii ATCC 33959]
Length = 540
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 202/374 (54%), Gaps = 15/374 (4%)
Query: 71 WVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMF 129
+ +PE E D + +NYTSGTT PKGV HR I + I + V+LWTLPMF
Sbjct: 158 YERPEMDEDDIVTINYTSGTTGDPKGVCRTHRAETIHAYLVSMHQDIADDDVYLWTLPMF 217
Query: 130 HENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNML-----SSSP 184
H NGW + + + G ++C R VD + I+ V+++C A VLN+L
Sbjct: 218 HVNGWGHIYAITGHGAKHVCTRGVDAETVLDAIRDEDVSYLCAAPTVLNILMKHYREEGG 277
Query: 185 STKPLDRPVKILTSGASPPAAVLLRTES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLA 243
PV+ T+GA+PP A + E G+ + H YG TET G +++ + ++
Sbjct: 278 VETTGASPVRAATAGAAPPEATIRTVEDEFGWRLMHVYGATET-GPLITTSEAGRYLGDG 336
Query: 244 DTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
D +R +K +QG+ +G D+ VV E G V D QS GEIV +M Y E +
Sbjct: 337 D-DRFGVKKKQGIGYLG-TDVRVVD-EDGNDVPRDDQSIGEIVVAGNQVMEKYWNKPEET 393
Query: 304 --SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINE 361
+ R +++ GD+ VV +G++ I+DR KD+IISGGENISS E+E L+ + + +
Sbjct: 394 EEAFSARLEGYYHMGDLAVVDENGFISIQDRKKDIIISGGENISSIELEDTLFDHDEVAD 453
Query: 362 VALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMAHKSVIIEDELP 419
VA++ WG+ P AFV P T EA+IEFCR R+ Y K + ELP
Sbjct: 454 VAVIPVPSDEWGESPKAFVVPTSGDPDAPGVTAEALIEFCRERIATYKVPKEIEFVAELP 513
Query: 420 KTATGKIQKFVLRE 433
KTATGKIQK+ LRE
Sbjct: 514 KTATGKIQKYELRE 527
>gi|300722165|ref|YP_003711448.1| AMP-dependent synthetase/ligase [Xenorhabdus nematophila ATCC
19061]
gi|297628665|emb|CBJ89243.1| putative AMP-dependent synthetase/ligase [Xenorhabdus nematophila
ATCC 19061]
Length = 535
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 154/433 (35%), Positives = 228/433 (52%), Gaps = 25/433 (5%)
Query: 6 LDHKRVSVLLHHSESK---LLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSP 62
+D +S+L H + K ++ D +S + ++ P LP LI + S T S
Sbjct: 119 IDKIFISLLDHVAFKKPIQIIITDQDNSTIPISV----PEYKFLPYESLITEYTSKTLS- 173
Query: 63 TVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQPVF 122
P +E + +++N TSGT+ PK VV+ HRG F+ +S+++DW +P +P +
Sbjct: 174 ---------FIPINEHEAISINSTSGTSGQPKLVVYSHRGAFLNAISNILDWDMPKRPTY 224
Query: 123 LWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSS 182
LWTLPMFH NGW + W +AA GT+IC+RK D +I+ H VTH CGA +V + L
Sbjct: 225 LWTLPMFHCNGWCFPWAIAARAGTHICMRKFDAEEAIQLIQAHNVTHYCGAPIVHHSLGK 284
Query: 183 SPST--KPLDRPVKILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWN 240
+ K + V L +GA P V +++G + YGLTET G + C K +W
Sbjct: 285 AAQKHGKHFNGLVSALIAGAPPTEMVFSLLDAVGIKGTQVYGLTETYGPITVCENKDEWK 344
Query: 241 TLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQ 300
L +E K RQG+ + ++ V+ V DG++ GEI R G+I+ Y D
Sbjct: 345 NLPQSEMILKKMRQGIVSNLQGEVSVIDENRQSEVPFDGKTIGEIAIR-GNIVASY--DP 401
Query: 301 EGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAIN 360
E WFYTGD+ VV DGY++I DR KD+IISGGENISS E+E+ L +P +
Sbjct: 402 ERHITPETTGQWFYTGDLAVVDPDGYIKIIDRKKDIIISGGENISSLELENALSGHPGVF 461
Query: 361 EVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVIIEDELPK 420
A+VA+ D +WG+ P AF+ L S TE+ + ++ + + K LP+
Sbjct: 462 AAAIVAKPDPYWGEVPHAFIELNENASV--TEQELNDYICTIVARFKRPKGYTFMT-LPR 518
Query: 421 TATGKIQKFVLRE 433
GK K LR+
Sbjct: 519 NVNGKTIKEQLRK 531
>gi|448361259|ref|ZP_21549880.1| AMP-dependent synthetase and ligase [Natrialba asiatica DSM 12278]
gi|445651069|gb|ELZ03979.1| AMP-dependent synthetase and ligase [Natrialba asiatica DSM 12278]
Length = 557
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 227/465 (48%), Gaps = 45/465 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLI------------ 52
RL + + +L + +++ DY+ + A P+ T + V
Sbjct: 89 RLTSEDYAYILEDAGVDVIYADYEFAEKVEAVRDEVPTETFITNDVDAIGTEAGDAETSA 148
Query: 53 -------------HDDVSATSSPTVGHPNFKWVQPESEWDPMALNYTSGTTSSPKGVVHC 99
DD+ A ++ P +E D + +NYTSGTT PKGV
Sbjct: 149 SDGSDATDEAWESFDDLLANATAEYDRPTM------AEDDIITINYTSGTTGDPKGVCRT 202
Query: 100 HRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIY 159
HR + I + + +LWTLPMFH NGW + + + +G ++C R VD I
Sbjct: 203 HRTETLHAYLISIHQDVTDDDTYLWTLPMFHVNGWGHIYAVTGMGAKHVCTRGVDAEWIL 262
Query: 160 SVIKHHGVTHICGALVVLNML------SSSPSTKPLDRPVKILTSGASPPAAVLLRTES- 212
I+ V+++CGA VLNML +SSP V+I T+G++PP A + E
Sbjct: 263 ETIREEDVSYLCGAPTVLNMLIDHYEDASSPPETSGASDVRIATAGSAPPEATIRTVEDE 322
Query: 213 LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETG 272
G+ + H YG TET + + + ++ +D R +K RQG+ +G ++ VV E G
Sbjct: 323 FGWQLKHVYGATETGPLITTSDARRHFDADSDG-RFAIKKRQGLGFLG-TEVRVVD-EDG 379
Query: 273 MSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIK 330
V D + GE+V R +M Y E ++ D + +F+TGD+ + G + I+
Sbjct: 380 NDVPRDKTTIGEVVVRGNQVMEEYWNKPEVTAEAFSDRLDGYFHTGDLATIDEHGMIAIQ 439
Query: 331 DRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP 390
DR KD+IISGGENISS E+E L+ +PA+ VA++ + WG+ P AFV P
Sbjct: 440 DRKKDIIISGGENISSIELEDALFDHPAVAAVAVIPSPSEQWGETPKAFVVPASGDVNDP 499
Query: 391 --TEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
+ + ++EF R L Y A + V +LP TATGK+QK+ LRE
Sbjct: 500 GVSTDELVEFTRENLAGYKAVQRVEFVTQLPTTATGKVQKYELRE 544
>gi|375140139|ref|YP_005000788.1| acyl-CoA synthetase [Mycobacterium rhodesiae NBB3]
gi|359820760|gb|AEV73573.1| acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II [Mycobacterium
rhodesiae NBB3]
Length = 510
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 160/438 (36%), Positives = 229/438 (52%), Gaps = 42/438 (9%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQ-SSPLALAALSLFPSNTIL---PKPVLIHDDVSATS 60
RL VS ++ E+ +L VD + PLA + P +L VL+ D ++
Sbjct: 94 RLQPNEVSYIVDDCEADVLLVDPELDGPLAQVSA---PHRLVLGGESDDVLL--DFASEP 148
Query: 61 SPTVGHPNFKWVQPESEWDPMA-LNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPNQ 119
P W P+ D +A LNYTSGTT PKGV HR ++I ++ + ++ +
Sbjct: 149 QP--------WSHPDE--DTIATLNYTSGTTGKPKGVCLTHRNIWINGLTFGLHMQVSDH 198
Query: 120 PVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNM 179
V + LPMFH NGW + +G + LRKVD I + HGVT +CGA V N+
Sbjct: 199 DVLMHVLPMFHCNGWGMPYVATGLGVEQVVLRKVDGAEILRRVDAHGVTLMCGAPTVWNI 258
Query: 180 LSSSP----STKPLDRPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVSCA 234
+ + P ++I+ +GA PP+ + R E LG+ + YGLTETA V
Sbjct: 259 VLDAARDWQGAIPGRDRLRIVCAGAPPPSLTIARIERELGWEFNQIYGLTETAPLVTVNR 318
Query: 235 WKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSIML 294
+ ++ L +RA+ +R GV P G SV+ D +GE++ S +M
Sbjct: 319 PRRDYDGLELGDRAKKLSRAGV------------PSLGTSVRID--EEGEVLVASNHVMA 364
Query: 295 GYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLY 354
Y +E + ++ WF+TGD GV+ SDGYL I DR KDVIISGGEN+SS EVE VL
Sbjct: 365 EYWNKKEETDAAIKSG-WFHTGDGGVLGSDGYLTITDRKKDVIISGGENVSSIEVEDVLV 423
Query: 355 MNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHKSVII 414
+PAI + A++A D WG+ A V + + TE +I+F +++L HY A K VI
Sbjct: 424 GHPAIADAAVIATPDDKWGELVTAIVVPR--DGQTLTEGEVIDFAKSKLAHYKAPKKVIF 481
Query: 415 EDELPKTATGKIQKFVLR 432
++P TATGK QKF LR
Sbjct: 482 RSDIPYTATGKKQKFKLR 499
>gi|399575348|ref|ZP_10769106.1| AMP-dependent synthetase and ligase [Halogranum salarium B-1]
gi|399239616|gb|EJN60542.1| AMP-dependent synthetase and ligase [Halogranum salarium B-1]
Length = 536
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 150/441 (34%), Positives = 223/441 (50%), Gaps = 26/441 (5%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSAT----- 59
RL +L+ + K ++ DY+ A + +P + I +DV A
Sbjct: 89 RLVASDFEYILNDAGVKAIYADYK------FADRIQEIRDDVPTELFITNDVDAVEGEWE 142
Query: 60 SSPTVGHPNFKWVQPE-SEWDPMALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRIPN 118
S + + + +PE E D + +NYTSGTT PKGV HR + I I +
Sbjct: 143 SFDELVTDSTDYERPEMDESDIITINYTSGTTGDPKGVCRSHRTETLHAYLISIHQEISD 202
Query: 119 QPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLN 178
V+LWTLPMFH NGW + + + G +IC R +D I+ I+ V++ C A VLN
Sbjct: 203 NDVYLWTLPMFHVNGWGHIYAITGAGARHICTRGIDAGEIFERIQTEDVSYFCAAPTVLN 262
Query: 179 MLSS-----SPSTKPLDRPVKILTSGASPPAAVLLRTE-SLGFVVSHSYGLTETAGFVVS 232
ML+ P T + PV+ T+GA+PP A + E G+ + H YG TET + +
Sbjct: 263 MLAEYYQKHDPETTGAN-PVRAATAGAAPPEATIRAVEDDFGWYLHHVYGATETGPLITT 321
Query: 233 CAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSGSI 292
+ ++ + ++R +K QG+ +G ++ VV + G V DG + GEIV R +
Sbjct: 322 SDARRFFDQES-SDRFAIKKTQGIGYLG-TEVRVVD-DDGNDVAEDGTTVGEIVVRGNQV 378
Query: 293 MLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
M Y + E + D +++ GD+ V G++ I+DR KD+IISGGENISS E+E
Sbjct: 379 MDSYWEKPEETEEAFNDRVEGYYHMGDLATVDEHGFITIQDRKKDIIISGGENISSIELE 438
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKP--TEEAIIEFCRARLPHYMA 408
L+ + A+ +VA++ WG+ P AF+ P TEE I FCR R+ Y
Sbjct: 439 DTLFEHDAVADVAVIPAPSDKWGETPKAFLVPANGDPDNPGVTEEEIKAFCRERIASYKV 498
Query: 409 HKSVIIEDELPKTATGKIQKF 429
V ELPKTATGKIQK+
Sbjct: 499 PGEVEFVTELPKTATGKIQKY 519
>gi|433604910|ref|YP_007037279.1| AMP-dependent synthetase and ligase [Saccharothrix espanaensis DSM
44229]
gi|407882763|emb|CCH30406.1| AMP-dependent synthetase and ligase [Saccharothrix espanaensis DSM
44229]
Length = 509
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 155/443 (34%), Positives = 225/443 (50%), Gaps = 53/443 (11%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL VS ++ HS + +L VD P L D V+A T+
Sbjct: 95 RLRPDEVSYVVEHSGASVLLVD----------------------PELELDGVTARHRFTL 132
Query: 65 GHPNFKW----VQPESEWDP-----MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWR 115
G + + V+P DP +NYTSGTT+ PKGV HR +++ V+ + R
Sbjct: 133 GVESEQLLRFDVEPRPWSDPDEDATATVNYTSGTTARPKGVRMTHRNIWLNAVTFAMHTR 192
Query: 116 IPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALV 175
+ V+L LPMFH NGW +G+A +G + LRKVD I + HHGVT +CGA
Sbjct: 193 AWERDVYLHVLPMFHCNGWGMPFGLAGLGVPQVVLRKVDGTEILRRVDHHGVTLMCGAPA 252
Query: 176 VLNMLSSSPSTKPLDRP----VKILTSGASPPAAVLLRT-ESLGFVVSHSYGLTETAGFV 230
V N + + T + P V+I+ +GA PP+ + R E LG+ YGLTET+ +
Sbjct: 253 VWNAVLDAARTWDGEIPGRDRVRIVCAGAPPPSRTIARVGEELGWEFLQLYGLTETSPLL 312
Query: 231 VSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPETGMSVKHDGQSQGEIVFRSG 290
+ + L ERAR +R G G+ V+ GE++ R+
Sbjct: 313 TFNRTRPGDDALPAEERARKLSRAGA--------------PGLGVRLRIAESGEVLARTN 358
Query: 291 SIMLGYLKDQEGSSLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVE 350
+M GY + + ++ + D WF+TGD G + +G L I DR KDVII+GGEN+SS EVE
Sbjct: 359 HVMAGYWDNPDATAEAVEDG-WFHTGDGGSLDGEGQLTISDRKKDVIITGGENVSSIEVE 417
Query: 351 SVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCRARLPHYMAHK 410
VL+ +P++ E A++ + WG+ A + L + TE +I CRARL + +
Sbjct: 418 DVLFSHPSVAEAAVIGVPHEKWGETIKALIVLV--EGARATEAELISHCRARLAGFKSPT 475
Query: 411 SVIIEDELPKTATGKIQKFVLRE 433
SV D +P+TATGK+QKF LRE
Sbjct: 476 SVEFRDAIPRTATGKVQKFKLRE 498
>gi|448390206|ref|ZP_21565986.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
gi|445667534|gb|ELZ20176.1| AMP-dependent synthetase and ligase [Haloterrigena salina JCM
13891]
Length = 553
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 151/466 (32%), Positives = 232/466 (49%), Gaps = 51/466 (10%)
Query: 5 RLDHKRVSVLLHHSESKLLFVDYQSSPLALAALSLFPSNTILPKPVLIHDDVSATSSPTV 64
RL + S +L +E ++ DY+ + P +P I +D A
Sbjct: 89 RLTPEDFSYMLEDAEVDAIYADYEY------VDKIEPIRDEVPTETFITNDADAVEGGEA 142
Query: 65 GHP--------NFKWVQ--------------PE-SEWDPMALNYTSGTTSSPKGVVHCHR 101
G + +W + PE SE + + +NYTSGTT PKGV HR
Sbjct: 143 GEAGRSSSDSSDVEWEEFDAVLEDAGTEYDRPEMSEDEIITMNYTSGTTGDPKGVCRTHR 202
Query: 102 G----LFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDVPI 157
++IT + + V+LWTLPMFH NGW + + + +G ++C R VD
Sbjct: 203 SETLHAYLITAHQ----ELRDDDVYLWTLPMFHVNGWGHIYAVTGIGAKHVCTRGVDAGD 258
Query: 158 IYSVIKHHGVTHICGALVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRTES 212
I+ ++ V+++CGA VLN+L + P T + V+I T+G++PP A + E
Sbjct: 259 IFEAVQTEDVSYMCGAPTVLNLLIDYYEENDPETTG-ENGVRIATAGSAPPEATIRTVED 317
Query: 213 -LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHPET 271
G+ + H YG TET + + + ++ D++R +K RQG+ +G ++ VV E
Sbjct: 318 EFGWYLKHVYGATETGPLITTSDARRTFDD-DDSDRFAIKKRQGLGYLG-TEIRVVD-ED 374
Query: 272 GMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGSSLCMRD--NDWFYTGDIGVVHSDGYLEI 329
G V D S GEIV R +M Y + + D +++TGD+ VV G + I
Sbjct: 375 GNDVPRDDASIGEIVVRGNQVMEKYWNKPDATEEAFNDRVEGYYHTGDLAVVDEHGMISI 434
Query: 330 KDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELSKK 389
+DR KD+IISGGENISS E+E L+ +P +++VA++ WG+ P AFV
Sbjct: 435 QDRKKDIIISGGENISSIELEDTLFDHPEVSDVAVIPAPSDEWGETPKAFVVPGNGDPDD 494
Query: 390 P--TEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
P T + +++F R L Y + V +ELP TATGKIQK+ LR+
Sbjct: 495 PSVTRDELVDFTRDNLAGYKVVREVEFVEELPTTATGKIQKYELRQ 540
>gi|453088980|gb|EMF17020.1| acetyl-CoA synthetase-like protein [Mycosphaerella populorum
SO2202]
Length = 603
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/372 (36%), Positives = 204/372 (54%), Gaps = 21/372 (5%)
Query: 81 MALNYTSGTTSSPKGVVHCHRGLFIITVSSLIDWRI------PNQPVFLWTLPMFHENGW 134
+AL YTSGTT+ PKGV + HR ++ + ++I+ + ++ +LWTLPMFH GW
Sbjct: 221 IALAYTSGTTARPKGVEYTHRSAYLAALGNVIESNLNVAHPKASRAHYLWTLPMFHAMGW 280
Query: 135 SYSWGMAAVGGTNICLRKVDVPIIYSVIKHHGVTHICGALVVLNMLSSSPSTKPLDRPVK 194
++ W + A+ GT+ CLRK+D P I+ ++K ++H A V +L + + L+ PV+
Sbjct: 281 TFPWAVTAIRGTHYCLRKIDYPYIWKLLKEEQLSHFNAAPTVNTLLLADSNAVKLEHPVR 340
Query: 195 ILTSGASPPAAVLLRTESLGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQ 254
+ + + P A + + E +H YGLTET G + +W+ L ++ ARQ
Sbjct: 341 VTVAASPPTAHLFQQMEEHNLRPTHVYGLTETYGPITKGYQLPEWDRLETKQKYAKMARQ 400
Query: 255 GVRTIGLADMDVVH-----------PETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS 303
G + V+ ET V DG+ GEI F GY KD +
Sbjct: 401 GHGFVTSLPARVIKTNQDESGSWGAAETIEDVAKDGKEIGEICFIGNICARGYYKDAAAT 460
Query: 304 SLCMRDNDWFYTGDIGVVHSDGYLEIKDRSKDVIISGGENISSAEVESVLYMNPAINEVA 363
++GD+ V H DG ++I DR+KD+IISGGENISS +E +L +P I E A
Sbjct: 461 KKLFAGGVQ-HSGDLAVWHPDGAIQILDRAKDIIISGGENISSVALEGMLVTHPDILEAA 519
Query: 364 LVAQRDKFWGKRPCAFVSLKWELSKKPTEEAIIEFCR--ARLPHYMAHKSVIIEDELPKT 421
VA +DK WG+RP AFV++K K T E II++ + + + +M K + I DELPKT
Sbjct: 520 CVAVQDKQWGERPKAFVTIKGG-KKGLTGEDIIQWAKNASGISRFMVPKEIEILDELPKT 578
Query: 422 ATGKIQKFVLRE 433
+TGK++K VLR+
Sbjct: 579 STGKVRKNVLRD 590
>gi|448572032|ref|ZP_21640121.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
gi|445721065|gb|ELZ72734.1| acyl-CoA synthetase [Haloferax lucentense DSM 14919]
Length = 540
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 146/408 (35%), Positives = 212/408 (51%), Gaps = 24/408 (5%)
Query: 46 LPKPVLIHDDVSATSSPTVGH---------PNFKWVQPE-SEWDPMALNYTSGTTSSPKG 95
+P + + +D + T G + + +PE E D + +NYTSGTT PKG
Sbjct: 124 IPAEIFVTNDPEKAAESTDGEWLDFDELVAESTDYERPEMDEDDIITINYTSGTTGDPKG 183
Query: 96 VVHCHRGLFIITVSSLIDWRIPNQPVFLWTLPMFHENGWSYSWGMAAVGGTNICLRKVDV 155
V HR I + I + V+LWTLPMFH NGW + + + G ++C R V+
Sbjct: 184 VCRTHRAETIHAYLISMHQDIADDDVYLWTLPMFHVNGWGHIYAITGHGAKHVCTRGVEA 243
Query: 156 PIIYSVIKHHGVTHICGALVVLNML-----SSSPSTKPLDRPVKILTSGASPPAAVLLRT 210
+ I+ V+++C A VLN+L PV+ T+GA+PP A +
Sbjct: 244 EAVLDAIRDEDVSYLCAAPTVLNILMKHYREEGGVETTGASPVRAATAGAAPPEATIRTV 303
Query: 211 ES-LGFVVSHSYGLTETAGFVVSCAWKSQWNTLADTERARLKARQGVRTIGLADMDVVHP 269
E G+ + H YG TET G +++ + ++ T D +R +K +QG+ +G D+ VV
Sbjct: 304 EDEFGWRLMHVYGATET-GPLITTSEAGRYLTDGD-DRFGVKKKQGIGYLG-TDVRVVD- 359
Query: 270 ETGMSVKHDGQSQGEIVFRSGSIMLGYLKDQEGS--SLCMRDNDWFYTGDIGVVHSDGYL 327
E G V D QS GEIV +M Y E + + R +++ GD+ VV +G++
Sbjct: 360 EDGNDVPRDEQSVGEIVVAGNQVMEKYWNKPEETEEAFSARLEGYYHMGDLAVVDENGFI 419
Query: 328 EIKDRSKDVIISGGENISSAEVESVLYMNPAINEVALVAQRDKFWGKRPCAFVSLKWELS 387
I+DR KD+IISGGENISS E+E L+ + + +VA++ WG+ P AFV
Sbjct: 420 SIQDRKKDIIISGGENISSIELEDTLFDHDEVADVAVIPVPSDEWGESPKAFVVPTSGDP 479
Query: 388 KKP--TEEAIIEFCRARLPHYMAHKSVIIEDELPKTATGKIQKFVLRE 433
P T EA+I FCR R+ Y K V ELPKTATGKIQK+ LRE
Sbjct: 480 DAPGVTAEALIAFCRERIATYKVPKEVEFVTELPKTATGKIQKYELRE 527
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,143,680,583
Number of Sequences: 23463169
Number of extensions: 310060211
Number of successful extensions: 864675
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 33787
Number of HSP's successfully gapped in prelim test: 18126
Number of HSP's that attempted gapping in prelim test: 700308
Number of HSP's gapped (non-prelim): 103915
length of query: 439
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 293
effective length of database: 8,933,572,693
effective search space: 2617536799049
effective search space used: 2617536799049
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)