Query 036549
Match_columns 120
No_of_seqs 103 out of 224
Neff 5.4
Searched_HMMs 46136
Date Fri Mar 29 03:06:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036549.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036549hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3240 Phosphatidylinositol s 100.0 1.9E-39 4.2E-44 251.0 4.7 105 2-114 108-215 (218)
2 PF13939 TisB_toxin: Toxin Tis 51.4 24 0.00052 19.3 2.7 19 88-106 7-25 (28)
3 PRK14754 toxic peptide TisB; P 50.0 41 0.0009 18.5 3.5 19 88-106 7-25 (29)
4 PHA02650 hypothetical protein; 32.8 71 0.0015 21.8 3.3 45 11-59 29-73 (81)
5 PF12666 PrgI: PrgI family pro 29.4 1.7E+02 0.0037 19.2 4.9 28 19-48 3-31 (93)
6 PHA02975 hypothetical protein; 26.3 95 0.0021 20.6 3.0 38 11-57 29-66 (69)
7 PF08511 COQ9: COQ9; InterPro 25.4 65 0.0014 21.5 2.2 22 32-53 30-51 (79)
8 PF13080 DUF3926: Protein of u 20.8 73 0.0016 19.3 1.5 16 91-106 14-29 (44)
9 PF03857 Colicin_im: Colicin i 19.1 3.1E+02 0.0067 20.5 4.8 11 84-94 123-133 (138)
10 PHA03054 IMV membrane protein; 17.4 2.2E+02 0.0047 19.1 3.3 41 11-56 29-69 (72)
No 1
>KOG3240 consensus Phosphatidylinositol synthase [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=251.01 Aligned_cols=105 Identities=39% Similarity=0.415 Sum_probs=98.2
Q ss_pred CceeheeheecccCCCCCcCcCCCcccchhccccCchhHHHHHHHHHHHHHHHHHHHhhhcCchhhhhhhhcccCchHHH
Q 036549 2 PSTLDLCCSTFLRGKTSHKDVKDSTNWLFKAYYGHRMFMGYCRVACELLYLILFLIAEKQSGSLVDVVVSAVQQGSPLSF 81 (120)
Q Consensus 2 ~SHw~hmyssl~~G~~SHK~v~~~~~~iLrlYY~~r~~Lf~~C~gnE~Fyv~LYl~~f~~~~~~~~~~~~~~~~~~~~~~ 81 (120)
+|||+|||+|.+.|++|||++|++.||+||+||+||++||+||++||+||+.||+.+|.++|.+. +..++.+
T Consensus 108 aSHwlhm~st~l~G~sSHK~v~~~~n~llrLYY~~r~vL~~~C~~nE~Fyi~LYl~~f~~~pll~--------~~~~~s~ 179 (218)
T KOG3240|consen 108 ASHWLHMHSTVLVGKSSHKDVDDSTNWLLRLYYTNRDVLFTICAGNELFYILLYLLAFSQGPLLG--------NVVVFSI 179 (218)
T ss_pred HHHHHHHHHHHHhccccccccccccceeEEEEecCcceehhhhhhHHHHHHHHHHHHcCCCCcee--------eeeHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999988764 5677778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhh---hhcccCCc
Q 036549 82 LVELSLFRWAIKQTINVIQLTLYNG---IMDPKIGQ 114 (120)
Q Consensus 82 l~~vs~Pi~~~Kq~iNvvQL~~A~~---~~d~~~~~ 114 (120)
...+++|+..+||+|||||++.|++ ..|+++.|
T Consensus 180 ~~~lsfp~a~~KqlInVi~l~tAa~~~~~~Dv~~r~ 215 (218)
T KOG3240|consen 180 TQILSFPLALLKQLINVIQLITAADVCVAHDVEERQ 215 (218)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHhh
Confidence 8889999999999999999999999 67888754
No 2
>PF13939 TisB_toxin: Toxin TisB, type I toxin-antitoxin system
Probab=51.35 E-value=24 Score=19.32 Aligned_cols=19 Identities=21% Similarity=0.046 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 036549 88 FRWAIKQTINVIQLTLYNG 106 (120)
Q Consensus 88 Pi~~~Kq~iNvvQL~~A~~ 106 (120)
.+-++|-++.+.|+.+|.-
T Consensus 7 ~ililkl~va~lqlldavl 25 (28)
T PF13939_consen 7 IILILKLIVAVLQLLDAVL 25 (28)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3568899999999999863
No 3
>PRK14754 toxic peptide TisB; Provisional
Probab=50.02 E-value=41 Score=18.48 Aligned_cols=19 Identities=16% Similarity=-0.069 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 036549 88 FRWAIKQTINVIQLTLYNG 106 (120)
Q Consensus 88 Pi~~~Kq~iNvvQL~~A~~ 106 (120)
.+-++|-++.+.|+.+|.-
T Consensus 7 ~ililkliva~lqlldavl 25 (29)
T PRK14754 7 AILILKLIVAALQLLDAVL 25 (29)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999863
No 4
>PHA02650 hypothetical protein; Provisional
Probab=32.77 E-value=71 Score=21.80 Aligned_cols=45 Identities=11% Similarity=0.214 Sum_probs=24.9
Q ss_pred ecccCCCCCcCcCCCcccchhccccCchhHHHHHHHHHHHHHHHHHHHh
Q 036549 11 TFLRGKTSHKDVKDSTNWLFKAYYGHRMFMGYCRVACELLYLILFLIAE 59 (120)
Q Consensus 11 sl~~G~~SHK~v~~~~~~iLrlYY~~r~~Lf~~C~gnE~Fyv~LYl~~f 59 (120)
|.++++.|++...+++++..+.+- ++.+..+..=+++..+||-.-
T Consensus 29 SVLtD~~~~~~~~~~~~~~~~~~~----ii~i~~v~i~~l~~flYLK~~ 73 (81)
T PHA02650 29 SVLSDEDGSKKTIKSVSWFNGQNF----IFLIFSLIIVALFSFFVFKGY 73 (81)
T ss_pred HHHcCCCCccccccccCCchHHHH----HHHHHHHHHHHHHHHHHHHHh
Confidence 456777777764334444433332 233334455677888887643
No 5
>PF12666 PrgI: PrgI family protein; InterPro: IPR024414 This family of bacterial proteins is functionally uncharacterised. Proteins in this family are typically between 116 and 146 amino acids in length. PrgI is found encoded on plasmids of Enterococcus faecalis, its function is not known.
Probab=29.38 E-value=1.7e+02 Score=19.19 Aligned_cols=28 Identities=18% Similarity=0.160 Sum_probs=16.8
Q ss_pred CcCcCC-CcccchhccccCchhHHHHHHHHH
Q 036549 19 HKDVKD-STNWLFKAYYGHRMFMGYCRVACE 48 (120)
Q Consensus 19 HK~v~~-~~~~iLrlYY~~r~~Lf~~C~gnE 48 (120)
-||+++ ++..+..+ |-|-+.+..+++-=
T Consensus 3 pkdi~~~e~ki~~Gl--T~RQl~~l~~~~~~ 31 (93)
T PF12666_consen 3 PKDISKYEEKIFFGL--TLRQLICLAIGALV 31 (93)
T ss_pred CcchhhccchhccCC--CHHHHHHHHHHHHH
Confidence 467776 44444455 77877777665443
No 6
>PHA02975 hypothetical protein; Provisional
Probab=26.27 E-value=95 Score=20.61 Aligned_cols=38 Identities=24% Similarity=0.402 Sum_probs=20.8
Q ss_pred ecccCCCCCcCcCCCcccchhccccCchhHHHHHHHHHHHHHHHHHH
Q 036549 11 TFLRGKTSHKDVKDSTNWLFKAYYGHRMFMGYCRVACELLYLILFLI 57 (120)
Q Consensus 11 sl~~G~~SHK~v~~~~~~iLrlYY~~r~~Lf~~C~gnE~Fyv~LYl~ 57 (120)
|.+++++|+|. + +.+|.. ..++..-+..=+++..+||-
T Consensus 29 sVLtdk~~~~~-~-~~~~~~-------~ii~i~~v~~~~~~~flYLK 66 (69)
T PHA02975 29 HVLTGKKEPKK-K-SSLSII-------LIIFIIFITCIAVFTFLYLK 66 (69)
T ss_pred HHHcCCCCCCc-C-CchHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 45778888887 2 333321 12333334445677777763
No 7
>PF08511 COQ9: COQ9; InterPro: IPR013718 COQ9 is an enzyme that is required for the biosynthesis of coenzyme Q []. It may either catalyse a reaction in the coenzyme Q biosynthetic pathway or have a regulatory role. ; PDB: 3NI7_B.
Probab=25.37 E-value=65 Score=21.54 Aligned_cols=22 Identities=23% Similarity=0.372 Sum_probs=12.5
Q ss_pred ccccCchhHHHHHHHHHHHHHH
Q 036549 32 AYYGHRMFMGYCRVACELLYLI 53 (120)
Q Consensus 32 lYY~~r~~Lf~~C~gnE~Fyv~ 53 (120)
=||++|..|..+=...|++++.
T Consensus 30 ~wYtKR~~L~~iY~st~l~~l~ 51 (79)
T PF08511_consen 30 NWYTKRAILAAIYASTELYMLQ 51 (79)
T ss_dssp -------HHHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHHHHHHHHhh
Confidence 4699999999998899987753
No 8
>PF13080 DUF3926: Protein of unknown function (DUF3926)
Probab=20.84 E-value=73 Score=19.32 Aligned_cols=16 Identities=31% Similarity=0.353 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHhhh
Q 036549 91 AIKQTINVIQLTLYNG 106 (120)
Q Consensus 91 ~~Kq~iNvvQL~~A~~ 106 (120)
-.||.+|+.|==-|+-
T Consensus 14 sAkqmlnILQEELssy 29 (44)
T PF13080_consen 14 SAKQMLNILQEELSSY 29 (44)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 5799999999655554
No 9
>PF03857 Colicin_im: Colicin immunity protein; InterPro: IPR005557 Colicin immunity proteins are plasmid encoded proteins necessary for protecting the cell against colicins. Colicins are toxins released by bacteria during times of stress [].; GO: 0015643 toxin binding, 0030153 bacteriocin immunity
Probab=19.06 E-value=3.1e+02 Score=20.49 Aligned_cols=11 Identities=18% Similarity=-0.046 Sum_probs=6.9
Q ss_pred HHHHHHHHHHH
Q 036549 84 ELSLFRWAIKQ 94 (120)
Q Consensus 84 ~vs~Pi~~~Kq 94 (120)
.+..|+.+.|-
T Consensus 123 ~lfiP~~~~k~ 133 (138)
T PF03857_consen 123 TLFIPVLVYKL 133 (138)
T ss_pred HHHHHHHHHHH
Confidence 35567777664
No 10
>PHA03054 IMV membrane protein; Provisional
Probab=17.37 E-value=2.2e+02 Score=19.07 Aligned_cols=41 Identities=17% Similarity=0.313 Sum_probs=20.4
Q ss_pred ecccCCCCCcCcCCCcccchhccccCchhHHHHHHHHHHHHHHHHH
Q 036549 11 TFLRGKTSHKDVKDSTNWLFKAYYGHRMFMGYCRVACELLYLILFL 56 (120)
Q Consensus 11 sl~~G~~SHK~v~~~~~~iLrlYY~~r~~Lf~~C~gnE~Fyv~LYl 56 (120)
|.++++++++.++.+.++ .+.+- ++....+..-+++..+||
T Consensus 29 sVl~dk~~~~~~~~~~~~-~~~~~----ii~l~~v~~~~l~~flYL 69 (72)
T PHA03054 29 SVLSDEKTVTSTNNTGCW-GWYWL----IIIFFIVLILLLLIYLYL 69 (72)
T ss_pred HHHcCCCCcccccccCCc-hHHHH----HHHHHHHHHHHHHHHHHH
Confidence 456777777775533222 22211 222333444566777776
Done!