BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036550
(356 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 176/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 176/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLSFC 119
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 176/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 126
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 245
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 305
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 176/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 176/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 176/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 120
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 180
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 176/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 123
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 242
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 302
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 176/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 176/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 126
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 245
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 246 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 305
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKPENLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 120
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKPENLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 121
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKPENLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 120
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKPENLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 217 bits (553), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L M+A +K++LFQ+ +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 217 bits (553), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 174/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L M+A +K++LFQ+ +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKPENLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 175/299 (58%), Gaps = 7/299 (2%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHP 59
E + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNHP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 60 NIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
NIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCH 119
Query: 120 QQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSGL 177
HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 179
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 180 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYKP 238
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 239 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+ ++ E + +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+ ++ E + +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR YT V T WY+APEIL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 297
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 298
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 120
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 299
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 121
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 216 bits (550), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 174/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L M+A +K++LFQ+ +GL +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFC 121
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 121
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 240
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 241 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 300
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 174/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L M+A +K++LFQ+ +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 123
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 242
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 243 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 302
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 174/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L M+A +K++LFQ+ +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 175/300 (58%), Gaps = 7/300 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 122
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 241
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHLR
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLR 301
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 174/299 (58%), Gaps = 7/299 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 118
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 237
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHL 295
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHL
Sbjct: 238 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 296
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 214 bits (544), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 174/299 (58%), Gaps = 7/299 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHL 295
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHL
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 297
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 214 bits (544), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 174/299 (58%), Gaps = 7/299 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 120
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 239
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHL 295
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+ PHL
Sbjct: 240 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHL 298
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 210 bits (535), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 111/290 (38%), Positives = 171/290 (58%), Gaps = 7/290 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
ME + +K+G G++G V++A NK +GEVVA+K ++ E + +RE+ L++LNH
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIVK+ ++I + ++ VFE + +L + M+A +K++LFQ+ +GL +
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFC 119
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRDLKP+NLL+ ++G IK+ADFGLAR Y V T WY+APEIL
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+ VD+W++G I AE++ R LF G E DQ+++I LG+P W G+
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP-GVTSMPDYK 238
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
FP+ + + S ++P ED +L+ + +DP KR +A AL HPFF+
Sbjct: 239 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 288
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 108/291 (37%), Positives = 173/291 (59%), Gaps = 12/291 (4%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE--KCLN---LREVKCLRKL 56
++Y LG G F V++A +K++ ++VAIK +K + E +N LRE+K L++L
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL 69
Query: 57 NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+HPNI+ + + K N+ VF+ M+ +L ++ K + + S +KA++ +GL+
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVII---KDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 117 YMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFK 174
Y+HQ HRDLKP NLL+ + G +K+ADFGLA+ + Y +V TRWY+APE+LF
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFG 186
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
+ +Y VDMWA+G I+AELLL P G + DQ+ +I LG+PT + W D ++
Sbjct: 187 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC--SLP 244
Query: 235 INYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
F G+ L + +A +D ++LI+ L ++PC R TA +AL+ +F
Sbjct: 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 175/291 (60%), Gaps = 10/291 (3%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
MEKY +K+G G++G V++A + G +VA+K ++ E + +RE+ L++L+H
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIV + ++I + + VFE M+ +L ++++ K Q +S +K +L+Q+ RG+ +
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHC 135
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFP--PYTERVGTRWYQAPEILFKS 175
HQ HRDLKP+NLL+ S G +K+ADFGLAR P YT V T WY+AP++L S
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
YS+ VD+W++G I AE++ +PLF G + DQ+ KI S+LG+P W +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
F S+++P ++ I+L+ ++ +DP KR +A +A+ HP+FK
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 175/291 (60%), Gaps = 10/291 (3%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
MEKY +K+G G++G V++A + G +VA+K ++ E + +RE+ L++L+H
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHH 78
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNIV + ++I + + VFE M+ +L ++++ K Q +S +K +L+Q+ RG+ +
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQ---DSQIKIYLYQLLRGVAHC 135
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFP--PYTERVGTRWYQAPEILFKS 175
HQ HRDLKP+NLL+ S G +K+ADFGLAR P YT V T WY+AP++L S
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLWYRAPDVLMGS 194
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
YS+ VD+W++G I AE++ +PLF G + DQ+ KI S+LG+P W +
Sbjct: 195 KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWK 254
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
F S+++P ++ I+L+ ++ +DP KR +A +A+ HP+FK
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFK 305
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 163/289 (56%), Gaps = 8/289 (2%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR-EKCLNLREVKCLRKLNHP 59
ME Y KLG G++ V++ +K + +VA+K ++ + C +REV L+ L H
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 60 NIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
NIV + ++I + ++ VFE + +L Q ++ + + VK +LFQ+ RGL Y H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYLD---DCGNIINMHNVKLFLFQLLRGLAYCH 117
Query: 120 QQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPP--YTERVGTRWYQAPEILFKSG 176
+Q HRDLKP+NLL+++ G +K+ADFGLAR + P Y V T WY+ P+IL S
Sbjct: 118 RQKVLHRDLKPQNLLINERGELKLADFGLARA-KSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
YS+++DMW +G I E+ RPLF G+ +Q++ I +LG+PT ++W L
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKT 236
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
Y +P+ L + P D +L+ L ++ R +A +A++HPFF
Sbjct: 237 YNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 166/291 (57%), Gaps = 11/291 (3%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC--LNLREVKCLRKLNH 58
MEKY +K+G G++G V++A N + GE A+K ++ E +RE+ L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIVK+ ++I K + VFE + +L +L++ + K++L Q+ G+ Y
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG---LESVTAKSFLLQLLNGIAYC 116
Query: 119 HQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFP--PYTERVGTRWYQAPEILFKS 175
H + HRDLKP+NLL++ +G +KIADFGLAR P YT V T WY+AP++L S
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
YS+ +D+W++G I AE++ PLF G EADQ+ +I +LG+P +W + + +
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN-VTELPKY 234
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
+ F + + + E I+L+ + DP +R TA +AL+H +FK
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 166/291 (57%), Gaps = 11/291 (3%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC--LNLREVKCLRKLNH 58
MEKY +K+G G++G V++A N + GE A+K ++ E +RE+ L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIVK+ ++I K + VFE + +L +L++ + K++L Q+ G+ Y
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG---LESVTAKSFLLQLLNGIAYC 116
Query: 119 HQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFP--PYTERVGTRWYQAPEILFKS 175
H + HRDLKP+NLL++ +G +KIADFGLAR P YT V T WY+AP++L S
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
YS+ +D+W++G I AE++ PLF G EADQ+ +I +LG+P +W + + +
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPN-VTELPKY 234
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
+ F + + + E I+L+ + DP +R TA +AL+H +FK
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 102/291 (35%), Positives = 166/291 (57%), Gaps = 11/291 (3%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC--LNLREVKCLRKLNH 58
MEKY +K+G G++G V++A N + GE A+K ++ E +RE+ L++L H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIVK+ ++I K + VFE + +L +L++ + K++L Q+ G+ Y
Sbjct: 60 SNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG---LESVTAKSFLLQLLNGIAYC 116
Query: 119 HQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFP--PYTERVGTRWYQAPEILFKS 175
H + HRDLKP+NLL++ +G +KIADFGLAR P YT + T WY+AP++L S
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
YS+ +D+W++G I AE++ PLF G EADQ+ +I +LG+P +W + + +
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN-VTELPKY 234
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
+ F + + + E I+L+ + DP +R TA +AL+H +FK
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/300 (35%), Positives = 174/300 (58%), Gaps = 15/300 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
M+KY +K+G G++G V++A N+ + E+VA+K ++ E + LRE+ L++L H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIV++ +++ + VFE +L + ++ VK++LFQ+ +GL +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFC 117
Query: 119 HQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPP--YTERVGTRWYQAPEILFKS 175
H + HRDLKP+NLL+++ G +K+ADFGLAR P Y+ V T WY+ P++LF +
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLARAF-GIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 176 GLYSSKVDMWAMGAIMAELL-LFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
LYS+ +DMW+ G I AEL RPLF G D DQ+ +I +LG+PT + W +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 235 INY-QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPP 293
Y +P + +L ++P + +L+++L +P +R +A EALQHP+F + PP
Sbjct: 237 KPYPMYP--ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD--FCPP 292
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 181 bits (460), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/288 (37%), Positives = 161/288 (55%), Gaps = 20/288 (6%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNIVKVKEL 67
+GSG++G V A++K SGE VAIK L + + E RE+ L+ + H N++ + ++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 68 IVEKGNV------FFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
++ + V MQ +L ++M K FSE ++ ++Q+ +GL Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLK------FSEEKIQYLVYQMLKGLKYIHSA 145
Query: 122 GYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSS 180
G HRDLKP NL V++ +KI DFGLAR DA T V TRWY+APE++ Y+
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQ 203
Query: 181 KVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY--Q 238
VD+W++G IMAE+L + LF+G D DQ+ +I V G P + + L A +Y
Sbjct: 204 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE-FVQKLNDKAAKSYIQS 262
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
PQ + + L P AS A +L+E + D KR TAA+AL HPFF+
Sbjct: 263 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 105/300 (35%), Positives = 174/300 (58%), Gaps = 15/300 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
M+KY +K+G G++G V++A N+ + E+VA+K ++ E + LRE+ L++L H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIV++ +++ + VFE +L + ++ VK++LFQ+ +GL +
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGD---LDPEIVKSFLFQLLKGLGFC 117
Query: 119 HQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPP--YTERVGTRWYQAPEILFKS 175
H + HRDLKP+NLL+++ G +K+A+FGLAR P Y+ V T WY+ P++LF +
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 176 GLYSSKVDMWAMGAIMAELL-LFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
LYS+ +DMW+ G I AEL RPLF G D DQ+ +I +LG+PT + W +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 235 INY-QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPP 293
Y +P + +L ++P + +L+++L +P +R +A EALQHP+F + PP
Sbjct: 237 KPYPMYP--ATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD--FCPP 292
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 161/288 (55%), Gaps = 20/288 (6%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNIVKVKEL 67
+GSG++G V A++K SGE VAIK L + + E RE+ L+ + H N++ + ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 68 IVEKGNV------FFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
++ + V MQ +L ++M + FSE ++ ++Q+ +GL Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGME------FSEEKIQYLVYQMLKGLKYIHSA 163
Query: 122 GYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSS 180
G HRDLKP NL V++ +KI DFGLAR DA T V TRWY+APE++ Y+
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQ 221
Query: 181 KVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY--Q 238
VD+W++G IMAE+L + LF+G D DQ+ +I V G P + + L A +Y
Sbjct: 222 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE-FVQKLNDKAAKSYIQS 280
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
PQ + + L P AS A +L+E + D KR TAA+AL HPFF+
Sbjct: 281 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 165/298 (55%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ + +G G++G V A + VAIK + + C LRE++ L + H N+
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 62 VKVKELIVEKG-----NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ +++++ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLL-----KSQQLSNDHICYFLYQILRGLK 158
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAR----EIDAFPPYTERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR E D TE V TRWY+APEI
Sbjct: 159 YIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 277
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P + A++L++ + +++P KR T EAL HP+ ++
Sbjct: 278 MKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ 335
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 165/296 (55%), Gaps = 19/296 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 140
Query: 117 YMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ + +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + G+
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGI-N 259
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY P + V + L P+A A++L++ + +++P KR +AL HP+
Sbjct: 260 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 138
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL+ + +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NXIIN 257
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 138
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL+ + +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NXIIN 257
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 138
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL+ + +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 257
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 142
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL+ + +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 261
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 146
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 147 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 206
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 207 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 265
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 266 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 323
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 138
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 257
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 142
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 202
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 261
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 143
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEI 203
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 262
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 263 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 143
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 144 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 203
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 204 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 262
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 263 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 320
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 144
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 145 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 204
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 205 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 263
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 264 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 321
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 135
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 136 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 195
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 196 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 254
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 255 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 312
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 142
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 261
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 178 bits (451), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 159/303 (52%), Gaps = 25/303 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCL-NLREVKCLRKLNHPNIV 62
+ L LG G++G V A +K +GE+VAIK ++ L LRE+K L+ H NI+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 63 KVKEL----IVEKGN-VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+ + E N V+ + E MQ +L++++ Q+ S+ ++ +++Q R +
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-----QMLSDDHIQYFIYQTLRAVKV 127
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPP-----------YTERVGTRW 165
+H HRDLKP NLL+ S +K+ DFGLAR ID TE V TRW
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRW 187
Query: 166 YQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSW 225
Y+APE++ S YS +D+W+ G I+AEL L RP+F G D Q+ I ++G+P D+
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 226 ADGLRQAMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
+ A Y P L + P + I+L++ + +DP KR TA EAL+HP
Sbjct: 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 284 FFK 286
+ +
Sbjct: 308 YLQ 310
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 136
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 255
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 256 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 138
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 139 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 198
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 199 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 257
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 258 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 315
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 158
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 159 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 277
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 278 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 171/314 (54%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + K RE++ +RKL+H NIV+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG----KAFKNRELQIMRKLDHCNIVR 77
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-----MNP 252
Query: 236 NYQ---FPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 253 NYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 311
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 312 PNVKLPNGRDTPAL 325
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 177 bits (450), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 140
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 259
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 260 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 317
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 102/302 (33%), Positives = 165/302 (54%), Gaps = 15/302 (4%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC--LNLREVKCLRKLNH 58
+++Y KLG G++G V++A++ + E VAIK ++ + E +REV L++L H
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NI+++K +I + +FE + +L + M+ K S +K++L+Q+ G+++
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYAENDLKKYMD----KNPDVSMRVIKSFLYQLINGVNFC 148
Query: 119 HQQGYFHRDLKPENLLVSQG------TIKIADFGLAREID-AFPPYTERVGTRWYQAPEI 171
H + HRDLKP+NLL+S +KI DFGLAR +T + T WY+ PEI
Sbjct: 149 HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEI 208
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
L S YS+ VD+W++ I AE+L+ PLF G E DQ++KI VLG P +W G+
Sbjct: 209 LLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP-GVTA 267
Query: 232 AMAINYQFPQLSGVNLSALMPSASEDAINLIES-LCSWDPCKRPTAAEALQHPFFKRCLY 290
FP+ G L ++ + +D + + + DP KR +A AL+HP+F +
Sbjct: 268 LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF 327
Query: 291 VP 292
P
Sbjct: 328 DP 329
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 177 bits (449), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 159/303 (52%), Gaps = 25/303 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCL-NLREVKCLRKLNHPNIV 62
+ L LG G++G V A +K +GE+VAIK ++ L LRE+K L+ H NI+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 63 KVKEL----IVEKGN-VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+ + E N V+ + E MQ +L++++ Q+ S+ ++ +++Q R +
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-----QMLSDDHIQYFIYQTLRAVKV 127
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPP-----------YTERVGTRW 165
+H HRDLKP NLL+ S +K+ DFGLAR ID TE V TRW
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRW 187
Query: 166 YQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSW 225
Y+APE++ S YS +D+W+ G I+AEL L RP+F G D Q+ I ++G+P D+
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 226 ADGLRQAMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
+ A Y P L + P + I+L++ + +DP KR TA EAL+HP
Sbjct: 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 284 FFK 286
+ +
Sbjct: 308 YLQ 310
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 165/298 (55%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V M +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL-----KTQHLSNDHICYFLYQILRGLK 158
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL+ + +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 159 YIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 218
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 277
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 278 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 335
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 176/314 (56%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 77
Query: 64 VKELIV---EKGNVFF---VFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ EK +V + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 252
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 311
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 312 PNVKLPNGRDTPAL 325
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAI+ + + C LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 142
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 261
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 166/298 (55%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 136
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 137 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP + + +
Sbjct: 197 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDL-NCIIN 255
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 256 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 313
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 111
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 231
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 286
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 345
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 346 PNVKLPNGRDTPAL 359
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 96
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 157 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 216
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 217 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 271
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 272 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 330
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 331 PNVKLPNGRDTPAL 344
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 89
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 209
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 264
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 265 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 323
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 324 PNVKLPNGRDTPAL 337
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 89
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 209
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 264
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 265 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 323
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 324 PNVKLPNGRDTPAL 337
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 111
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 231
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 286
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 287 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 345
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 346 PNVKLPNGRDTPAL 359
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 85
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 146 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 205
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 206 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 260
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 261 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 319
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 320 PNVKLPNGRDTPAL 333
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 82
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 143 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 202
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 203 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 257
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 258 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 316
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 317 PNVKLPNGRDTPAL 330
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 156
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 217 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 276
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 277 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 331
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 332 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 390
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 391 PNVKLPNGRDTPAL 404
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 77
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 252
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 311
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 312 PNVKLPNGRDTPAL 325
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 78
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 139 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 198
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 199 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 253
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 254 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 312
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 313 PNVKLPNGRDTPAL 326
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 172/314 (54%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + K RE++ +RKL+H NIV+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG----KAFKNRELQIMRKLDHCNIVR 77
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-----MNP 252
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 311
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 312 PNVKLPNGRDTPAL 325
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 19/298 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L + H NI
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KCQHLSNDHICYFLYQILRGLK 142
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 143 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 202
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 203 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 261
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY P + V + L P+A A++L++ + +++P KR +AL HP+ ++
Sbjct: 262 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQ 319
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 115
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 176 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 235
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 236 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 290
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 291 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 349
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 350 PNVKLPNGRDTPAL 363
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 113
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 174 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 233
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 234 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 288
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 289 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 347
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 348 PNVKLPNGRDTPAL 361
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 90
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 151 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 210
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 211 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 265
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 266 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 324
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 325 PNVKLPNGRDTPAL 338
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 81
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 142 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 201
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 202 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 256
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 257 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 315
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 316 PNVKLPNGRDTPAL 329
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 105
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 166 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 225
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 226 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 280
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 281 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 339
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 340 PNVKLPNGRDTPAL 353
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 77
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 197
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 252
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 311
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 312 PNVKLPNGRDTPAL 325
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/294 (35%), Positives = 161/294 (54%), Gaps = 22/294 (7%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ K +G+GSFG V+QA S EV K L+ +K RE++ +R + HPN+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQ-----DKRFKNRELQIMRIVKHPNVVD 96
Query: 64 VKELIVEKGN----VFF--VFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+K G+ VF V E + +Y+ + +Q +K +++Q+ R L Y
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 118 MHQQGYFHRDLKPENLLVS--QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ G +K+ DFG A+ + A P + +R+Y+APE++F +
Sbjct: 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGA 216
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y++ +D+W+ G +MAEL+ +PLF G DQ+ +I VLG+P+ + + M
Sbjct: 217 TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI-----KTMNP 271
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
NY +FPQ+ S + P DAI+LI L + P R TA EAL HPFF
Sbjct: 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 173/314 (55%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + +K RE++ +RKL+H NIV+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQ----DKRFKNRELQIMRKLDHCNIVR 77
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI-----REMNP 252
Query: 236 NY---QFPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY +FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 253 NYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 311
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 312 PNVKLPNGRDTPAL 325
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 109/314 (34%), Positives = 171/314 (54%), Gaps = 26/314 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+ TK +G+GSFG V+QA SGE+VAIK + + K RE++ +RKL+H NIV+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG----KAFKNRELQIMRKLDHCNIVR 77
Query: 64 VKELIVEKGN------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ G + V + + +Y++ + +Q VK +++Q+FR L Y
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 118 MHQQGYFHRDLKPENLLVSQGT--IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
+H G HRD+KP+NLL+ T +K+ DFG A+++ P + +R+Y+APE++F +
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 197
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y+S +D+W+ G ++AELLL +P+F G DQ+ +I VLG+PT + + M
Sbjct: 198 TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE-----MNP 252
Query: 236 NYQ---FPQLSGVNLSALM-PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYV 291
NY FPQ+ + + P +AI L L + P R T EA H FF L
Sbjct: 253 NYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDE-LRD 311
Query: 292 P----PHLRSTPAV 301
P P+ R TPA+
Sbjct: 312 PNVKLPNGRDTPAL 325
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 164/296 (55%), Gaps = 19/296 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC-LNLREVKCLRKLNHPNI 61
+Y+ +G G++G V A + + VAIK + + C LRE+K L H NI
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 62 VKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ RGL
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRGLK 140
Query: 117 YMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT----ERVGTRWYQAPEI 171
Y+H HRDLKP NLL++ +KI DFGLAR D +T E V TRWY+APEI
Sbjct: 141 YIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEI 200
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + + +
Sbjct: 201 MLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NCIIN 259
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY P + V + L P+A A++L++ + +++P KR +AL HP+
Sbjct: 260 LKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 169/301 (56%), Gaps = 25/301 (8%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL----KKSYSREKCLNLREVKCLRKLNH 58
+Y+ +G G++G V A + + VAIK + ++Y + LRE+K L + H
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQR---TLREIKILLRFRH 84
Query: 59 PNIVKVKELI----VEK-GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
NI+ + ++I +E+ +V+ V + M+ +LY+L+ K Q S + +L+Q+ R
Sbjct: 85 ENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILR 139
Query: 114 GLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYT----ERVGTRWYQA 168
GL Y+H HRDLKP NLL+ + +KI DFGLAR D +T E V TRWY+A
Sbjct: 140 GLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRA 199
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PEI+ S Y+ +D+W++G I+AE+L RP+F G DQ+ I +LGSP+ + +
Sbjct: 200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDL-NC 258
Query: 229 LRQAMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
+ A NY P + V + L P+A A++L++ + +++P KR +AL HP+ +
Sbjct: 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLE 318
Query: 287 R 287
+
Sbjct: 319 Q 319
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 158/303 (52%), Gaps = 25/303 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCL-NLREVKCLRKLNHPNIV 62
+ L LG G++G V A +K +GE+VAIK ++ L LRE+K L+ H NI+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENII 72
Query: 63 KVKEL----IVEKGN-VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+ + E N V+ + E MQ +L++++ Q+ S+ ++ +++Q R +
Sbjct: 73 TIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST-----QMLSDDHIQYFIYQTLRAVKV 127
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPP-----------YTERVGTRW 165
+H HRDLKP NLL+ S +K+ DFGLAR ID E V TRW
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRW 187
Query: 166 YQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSW 225
Y+APE++ S YS +D+W+ G I+AEL L RP+F G D Q+ I ++G+P D+
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND 247
Query: 226 ADGLRQAMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
+ A Y P L + P + I+L++ + +DP KR TA EAL+HP
Sbjct: 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307
Query: 284 FFK 286
+ +
Sbjct: 308 YLQ 310
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 166/294 (56%), Gaps = 19/294 (6%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNI 61
Y + +GSG++G V AV+ +G VAIK L + + E RE++ L+ + H N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 62 VKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
+ + E + + + + V M +L +LM K + E ++ ++Q+ +GL
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLM-----KHEKLGEDRIQFLVYQMLKGL 141
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
Y+H G HRDLKP NL V++ +KI DFGLAR+ D+ V TRWY+APE++
Sbjct: 142 RYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS--EMXGXVVTRWYRAPEVILN 199
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
Y+ VD+W++G IMAE++ + LF+G+D DQ+ +I V G+P + + L+ A
Sbjct: 200 WMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE-FVQRLQSDEA 258
Query: 235 INYQ--FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
NY P+L + ++++ +AS A+NL+E + D +R TA EAL HP+F+
Sbjct: 259 KNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 163/301 (54%), Gaps = 19/301 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYS--REKCLNLREVKCLRKLNHP 59
++Y + + +G+G++G V A + +G+ VAIK + ++ LRE+K L+ H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
NI+ +K+++ E +V+ V + M+ +L+Q++ + Q + V+ +L+Q+ R
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS----QPLTLEHVRYFLYQLLR 169
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPP-----YTERVGTRWYQ 167
GL YMH HRDLKP NLLV++ +KI DFG+AR + P TE V TRWY+
Sbjct: 170 GLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 168 APEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS-WA 226
APE++ Y+ +D+W++G I E+L R LF G + Q+ I VLG+P+ A
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 289
Query: 227 DGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
G + A P V + P A A++L+ + ++P R +AA AL+HPF
Sbjct: 290 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLA 349
Query: 287 R 287
+
Sbjct: 350 K 350
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 165/300 (55%), Gaps = 25/300 (8%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE--KCLNLREVKCLRKLN--- 57
+Y ++G G++G V++A + HSG VA+K+++ E +REV LR+L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 58 HPNIVKVKELIVEKGN-----VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
HPN+V++ ++ V VFE + +L ++ K L +E+ +K + Q
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLD-KAPPPGLPAET-IKDLMRQFL 122
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAR----EIDAFPPYTERVGTRWYQ 167
RGLD++H HRDLKPEN+LV S GT+K+ADFGLAR ++ FP V T WY+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP----VVVTLWYR 178
Query: 168 APEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWAD 227
APE+L +S Y++ VDMW++G I AE+ +PLF G EADQ+ KI ++G P D W
Sbjct: 179 APEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP- 236
Query: 228 GLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
R FP + +++P E L+ + +++P KR +A ALQH + +
Sbjct: 237 --RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 161/296 (54%), Gaps = 17/296 (5%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE--KCLNLREVKCLRKLN--- 57
+Y ++G G++G V++A + HSG VA+K+++ E +REV LR+L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 58 HPNIVKVKELIVEKGN-----VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
HPN+V++ ++ V VFE + +L ++ K L +E+ +K + Q
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLD-KAPPPGLPAET-IKDLMRQFL 122
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
RGLD++H HRDLKPEN+LV S GT+K+ADFGLAR V T WY+APE+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
L +S Y++ VDMW++G I AE+ +PLF G EADQ+ KI ++G P D W R
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP---RD 238
Query: 232 AMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
FP + +++P E L+ + +++P KR +A ALQH + +
Sbjct: 239 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 153/299 (51%), Gaps = 24/299 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE--KCLNLREVKCLRKLNH 58
MEKY +G GS+G V + NK +G +VAIK +S + K + +RE+K L++L H
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRH 83
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
N+V + E+ +K + VFE + + +E V+ +LFQ+ G+ +
Sbjct: 84 ENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFC 140
Query: 119 HQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSG 176
H HRD+KPEN+LVSQ G +K+ DFG AR + A Y + V TRWY+APE+L
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDV 200
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y VD+WA+G ++ E+ + PLF G + DQ+Y I LG+ R N
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIP-------RHQELFN 253
Query: 237 YQFPQLSGVNLSAL---------MPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
P +GV L + P SE I+L + DP KRP AE L H FF+
Sbjct: 254 KN-PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/301 (32%), Positives = 163/301 (54%), Gaps = 19/301 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYS--REKCLNLREVKCLRKLNHP 59
++Y + + +G+G++G V A + +G+ VAIK + ++ LRE+K L+ H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
NI+ +K+++ E +V+ V + M+ +L+Q++ + Q + V+ +L+Q+ R
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS----QPLTLEHVRYFLYQLLR 170
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPP-----YTERVGTRWYQ 167
GL YMH HRDLKP NLLV++ +KI DFG+AR + P TE V TRWY+
Sbjct: 171 GLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 168 APEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS-WA 226
APE++ Y+ +D+W++G I E+L R LF G + Q+ I VLG+P+ A
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQA 290
Query: 227 DGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
G + A P V + P A A++L+ + ++P R +AA AL+HPF
Sbjct: 291 VGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLA 350
Query: 287 R 287
+
Sbjct: 351 K 351
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 161/296 (54%), Gaps = 17/296 (5%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE--KCLNLREVKCLRKLN--- 57
+Y ++G G++G V++A + HSG VA+K+++ E +REV LR+L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 58 HPNIVKVKELIVEKGN-----VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
HPN+V++ ++ V VFE + +L ++ K L +E+ +K + Q
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLD-KAPPPGLPAET-IKDLMRQFL 122
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
RGLD++H HRDLKPEN+LV S GT+K+ADFGLAR V T WY+APE+
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEV 182
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
L +S Y++ VDMW++G I AE+ +PLF G EADQ+ KI ++G P D W R
Sbjct: 183 LLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP---RD 238
Query: 232 AMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
FP + +++P E L+ + +++P KR +A ALQH + +
Sbjct: 239 VSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 294
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/299 (35%), Positives = 161/299 (53%), Gaps = 20/299 (6%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL-----REVKCLRKLN 57
+Y ++G G++G V++A + HSG VA+K+++ L REV LR+L
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 58 ---HPNIVKVKELIVEKGN-----VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLF 109
HPN+V++ ++ V VFE + +L ++ K L +E+ +K +
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLD-KAPPPGLPAET-IKDLMR 127
Query: 110 QVFRGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
Q RGLD++H HRDLKPEN+LV S GT+K+ADFGLAR T V T WY+A
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRA 187
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L +S Y++ VDMW++G I AE+ +PLF G EADQ+ KI ++G P D W
Sbjct: 188 PEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP-- 244
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
R FP + +++P E L+ + +++P KR +A ALQH + +
Sbjct: 245 -RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 160/297 (53%), Gaps = 19/297 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V + + SG +A+K L + + RE++ L+ + H
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 110
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 111 NVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 165
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 166 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIM 223
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD +Q+ +I + G+P S +
Sbjct: 224 LNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPA-SVISRMPSH 282
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
A NY PQ+ N + + A+ A++L+E + D KR TA+EAL HP+F +
Sbjct: 283 EARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 159/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 156
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 214
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 273
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 142
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 200
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 259
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 260 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 159/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 142
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ + +KI DFGLAR D T V TRWY+APEI+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 200
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 259
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 168 bits (425), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 155
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 213
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 272
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 273 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 159/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 138
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ + +KI DFGLAR D T V TRWY+APEI+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 196
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 255
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L K + RE++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 148
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 206
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 265
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L ++ K Q ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KXQKLTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 91
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 92 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 146
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 147 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 204
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 205 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 263
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 264 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 132
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 190
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 249
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 141
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 199
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 258
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 167 bits (424), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L ++ K Q ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV-----KXQKLTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 147
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 205
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 264
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ K ++ V+ ++Q+ R
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK-----LTDDHVQFLIYQILR 132
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 190
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 249
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGXVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 141
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 199
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 258
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 142
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 200
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 259
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 148
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 206
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 265
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 93
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 94 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 148
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 149 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 206
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 207 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 265
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 266 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 143
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 201
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 202 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 260
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 167 bits (422), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 176/343 (51%), Gaps = 25/343 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLY 290
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F +
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY-- 311
Query: 291 VPPHLRSTPAVAATRRGMLKQQGDRIDA-EALPYPKIVKQLSP 332
H VA R + + ID ++L Y +++ + P
Sbjct: 312 ---HDPDDEPVADPRDQSFESRDLLIDEWKSLTYDEVISFVPP 351
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 100
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 101 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 155
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 156 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 213
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 214 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 272
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 273 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 138
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 196
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 255
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 156
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 214
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 273
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 274 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 159
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 217
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 276
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 132
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 190
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 249
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 250 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 141
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 199
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 258
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 138
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 196
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 255
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 159/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++++K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ + +KI DFGL R D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 87
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 142
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 143 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 200
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 201 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 259
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 260 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 133
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 191
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 250
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 92
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 93 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 147
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 148 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 205
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 206 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 264
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 265 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 79
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 80 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 134
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 135 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 192
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 193 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 251
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 252 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 159/300 (53%), Gaps = 26/300 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE--KCLNLREVKCLRKLNH 58
MEKY K+G GS+G V++ N+ +G++VAIK +S K + LRE++ L++L H
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 59 PNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V + E+ K + VFE C L++L + Q+ E VK+ +Q + +++
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHEL----DRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPY-TERVGTRWYQAPEILFKS 175
H+ HRD+KPEN+L+++ IK+ DFG AR + Y + V TRWY++PE+L
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y VD+WA+G + AELL PL+ G + DQ+Y I LG +Q +
Sbjct: 178 TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG-----DLIPRHQQVFST 232
Query: 236 NYQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
N F SGV L P+ S A+ L++ DP +R T + L HP+F+
Sbjct: 233 NQYF---SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFE 289
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 78
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 79 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 133
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 134 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 191
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 192 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 250
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 251 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 86
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 141
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 142 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 199
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 200 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 258
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 259 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 80
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 135
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 136 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 193
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 194 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 252
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 253 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 166 bits (421), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 83
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 138
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D T V TRWY+APEI+
Sbjct: 139 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD--EMTGYVATRWYRAPEIM 196
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 197 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 255
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 256 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 101
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 102 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 156
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D V TRWY+APEI+
Sbjct: 157 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMXGXVATRWYRAPEIM 214
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 215 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 273
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 274 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 177/330 (53%), Gaps = 52/330 (15%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY--SREKCLNLREVKCLRKLN- 57
+ KY L KKLG G++G VW+++++ +GEVVA+K + ++ S + RE+ L +L+
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 58 HPNIVKVKELIVEKGN--VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
H NIV + ++ + V+ VF+ M+ +L+ ++ A + + ++Q+ + +
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRA-----NILEPVHKQYVVYQLIKVI 122
Query: 116 DYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREI----------------------D 152
Y+H G HRD+KP N+L++ + +K+ADFGL+R D
Sbjct: 123 KYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 153 AFPPYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
P T+ V TRWY+APEIL S Y+ +DMW++G I+ E+L +P+F G+ +Q+ +
Sbjct: 183 DQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLER 242
Query: 213 ICSVLG-----------SPTMDSWADGLRQAMAINYQ-----FPQLSGVNLSALMPSA-- 254
I V+ SP + + L++ + I F + + L + P A
Sbjct: 243 IIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNL-LLKINPKADC 301
Query: 255 SEDAINLIESLCSWDPCKRPTAAEALQHPF 284
+E+A++L++ L ++P KR +A +AL+HPF
Sbjct: 302 NEEALDLLDKLLQFNPNKRISANDALKHPF 331
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 158/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI D+GLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 132
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D V TRWY+APEI+
Sbjct: 133 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAPEIM 190
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 249
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 250 SARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 104
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 159
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DFGLAR D V TRWY+APEI+
Sbjct: 160 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD--DEMXGYVATRWYRAPEIM 217
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 218 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 276
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 277 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 158/296 (53%), Gaps = 21/296 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 143
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREI-DAFPPYTERVGTRWYQAPEI 171
GL Y+H HRDLKP NL V++ +KI DFGLAR D Y V TRWY+APEI
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEI 200
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISS 259
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI DF LAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 158/296 (53%), Gaps = 21/296 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 143
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREI-DAFPPYTERVGTRWYQAPEI 171
GL Y+H HRDLKP NL V++ +KI DFGLAR D Y V TRWY+APEI
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEI 200
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISS 259
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 158/296 (53%), Gaps = 21/296 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 88
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 143
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREI-DAFPPYTERVGTRWYQAPEI 171
GL Y+H HRDLKP NL V++ +KI DFGLAR D Y V TRWY+APEI
Sbjct: 144 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGY---VATRWYRAPEI 200
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 201 MLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISS 259
Query: 232 AMAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI FGLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI D GLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI D GLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 157/295 (53%), Gaps = 19/295 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHP 59
E+Y +GSG++G V A + +G VA+K L + + RE++ L+ + H
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 81
Query: 60 NIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
N++ + ++ E +V+ V M +L +++ +K ++ V+ ++Q+ R
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-----LTDDHVQFLIYQILR 136
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
GL Y+H HRDLKP NL V++ +KI D GLAR D T V TRWY+APEI+
Sbjct: 137 GLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTD--DEMTGYVATRWYRAPEIM 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y+ VD+W++G IMAELL R LF GTD DQ+ I ++G+P + +
Sbjct: 195 LNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE-LLKKISSE 253
Query: 233 MAINY--QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A NY Q+ +N + + A+ A++L+E + D KR TAA+AL H +F
Sbjct: 254 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 161/302 (53%), Gaps = 21/302 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN-KHSGEVVAIKALKKSYSREK--CLNLREVKCLRKLN- 57
++Y ++G G++G V++A + K+ G VA+K ++ E +REV LR L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 58 --HPNIVKVKELIV-----EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQ 110
HPN+V++ ++ + + VFE + +L ++ K + +K +FQ
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD--KVPEPGVPTETIKDMMFQ 128
Query: 111 VFRGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAP 169
+ RGLD++H HRDLKP+N+LV S G IK+ADFGLAR T V T WY+AP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGL 229
E+L +S Y++ VD+W++G I AE+ +PLF+G+ + DQ+ KI V+G P + W
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP--- 244
Query: 230 RQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK--- 286
R F S + + E +L+ +++P KR +A AL HP+F+
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304
Query: 287 RC 288
RC
Sbjct: 305 RC 306
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 161/302 (53%), Gaps = 21/302 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN-KHSGEVVAIKALKKSYSREK--CLNLREVKCLRKLN- 57
++Y ++G G++G V++A + K+ G VA+K ++ E +REV LR L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 58 --HPNIVKVKELIV-----EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQ 110
HPN+V++ ++ + + VFE + +L ++ K + +K +FQ
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD--KVPEPGVPTETIKDMMFQ 128
Query: 111 VFRGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAP 169
+ RGLD++H HRDLKP+N+LV S G IK+ADFGLAR T V T WY+AP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGL 229
E+L +S Y++ VD+W++G I AE+ +PLF+G+ + DQ+ KI V+G P + W
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP--- 244
Query: 230 RQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK--- 286
R F S + + E +L+ +++P KR +A AL HP+F+
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304
Query: 287 RC 288
RC
Sbjct: 305 RC 306
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/297 (33%), Positives = 159/297 (53%), Gaps = 18/297 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN-KHSGEVVAIKALKKSYSREK--CLNLREVKCLRKLN- 57
++Y ++G G++G V++A + K+ G VA+K ++ E +REV LR L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 58 --HPNIVKVKELIV-----EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQ 110
HPN+V++ ++ + + VFE + +L ++ K + +K +FQ
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLD--KVPEPGVPTETIKDMMFQ 128
Query: 111 VFRGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAP 169
+ RGLD++H HRDLKP+N+LV S G IK+ADFGLAR T V T WY+AP
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGL 229
E+L +S Y++ VD+W++G I AE+ +PLF+G+ + DQ+ KI V+G P + W
Sbjct: 189 EVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP--- 244
Query: 230 RQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
R F S + + E +L+ +++P KR +A AL HP+F+
Sbjct: 245 RDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 162/288 (56%), Gaps = 11/288 (3%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALK-KSYSREKCLNLREVKCLRKLNHPNIVKVKE 66
+KLG+G++ V++ +NK +G VA+K +K S +RE+ +++L H NIV++ +
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYD 70
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKK--QKQQLFSESAVKAWLFQVFRGLDYMHQQGYF 124
+I + + VFE M +L + M+++ + + VK + +Q+ +GL + H+
Sbjct: 71 VIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKIL 130
Query: 125 HRDLKPENLLVSQ-GTIKIADFGLAREID-AFPPYTERVGTRWYQAPEILFKSGLYSSKV 182
HRDLKP+NLL+++ G +K+ DFGLAR ++ V T WY+AP++L S YS+ +
Sbjct: 131 HRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSI 190
Query: 183 DMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQL 242
D+W+ G I+AE++ +PLF GT++ +Q+ I ++G+P W + + N Q
Sbjct: 191 DIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP-SVTKLPKYNPNIQQR 249
Query: 243 SGVNL-SALMPSASE----DAINLIESLCSWDPCKRPTAAEALQHPFF 285
+L L P E + ++ + L +P R +A +AL HP+F
Sbjct: 250 PPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 158/290 (54%), Gaps = 17/290 (5%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHPNIVKVK 65
+ +GSG++G V A + + VA+K L + + RE++ L+ L H N++ +
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 66 EL------IVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
++ I + V+ V M +L ++ K Q S+ V+ ++Q+ RGL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIV-----KSQALSDEHVQFLVYQLLRGLKYIH 148
Query: 120 QQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
G HRDLKP N+ V++ + ++I DFGLAR+ D T V TRWY+APEI+ Y
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE--EMTGYVATRWYRAPEIMLNWMHY 206
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWAD-GLRQAMAINY 237
+ VD+W++G IMAELL + LF G+D DQ+ +I V+G+P+ + A A
Sbjct: 207 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
P + +LS++ A+ AI+L+ + D +R +AAEAL H +F +
Sbjct: 267 SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 158/290 (54%), Gaps = 17/290 (5%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHPNIVKVK 65
+ +GSG++G V A + + VA+K L + + RE++ L+ L H N++ +
Sbjct: 34 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 66 EL------IVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
++ I + V+ V M +L ++ K Q S+ V+ ++Q+ RGL Y+H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIV-----KCQALSDEHVQFLVYQLLRGLKYIH 148
Query: 120 QQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
G HRDLKP N+ V++ + ++I DFGLAR+ D T V TRWY+APEI+ Y
Sbjct: 149 SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADE--EMTGYVATRWYRAPEIMLNWMHY 206
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWAD-GLRQAMAINY 237
+ VD+W++G IMAELL + LF G+D DQ+ +I V+G+P+ + A A
Sbjct: 207 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
P + +LS++ A+ AI+L+ + D +R +AAEAL H +F +
Sbjct: 267 SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 157/290 (54%), Gaps = 17/290 (5%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSR--EKCLNLREVKCLRKLNHPNIVKVK 65
+ +GSG++G V A + + VA+K L + + RE++ L+ L H N++ +
Sbjct: 26 RPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 66 EL------IVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
++ I + V+ V M +L ++ K Q S+ V+ ++Q+ RGL Y+H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIV-----KCQALSDEHVQFLVYQLLRGLKYIH 140
Query: 120 QQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
G HRDLKP N+ V++ ++I DFGLAR+ D T V TRWY+APEI+ Y
Sbjct: 141 SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADE--EMTGYVATRWYRAPEIMLNWMHY 198
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWAD-GLRQAMAINY 237
+ VD+W++G IMAELL + LF G+D DQ+ +I V+G+P+ + A A
Sbjct: 199 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 258
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
P + +LS++ A+ AI+L+ + D +R +AAEAL H +F +
Sbjct: 259 SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 171/356 (48%), Gaps = 78/356 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN----LREVKCLRKLN 57
++Y + +G+GS+G V +A +K VVAIK + + + E ++ LRE+ L +LN
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--EDLIDCKRILREIAILNRLN 110
Query: 58 HPNIVKVKELIVEKG-----NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
H ++VKV ++++ K ++ V E + +L +E +K L+ +
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTP----VYLTELHIKTLLYNLL 166
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREID------------------- 152
G+ Y+H G HRDLKP N LV+Q ++K+ DFGLAR +D
Sbjct: 167 VGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 153 --AFP-------PYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLF------ 197
FP T V TRWY+APE++ Y+ +D+W++G I AELL
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286
Query: 198 -----RPLFQGTD--------------------EADQMYKICSVLGSPTMDSWADGLRQA 232
PLF G+ DQ+ I ++LG+P+ + + L +
Sbjct: 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEED-IEALEKE 345
Query: 233 MAINYQ--FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A Y FP+ G +L+ P++S DAI+L++ + ++P KR T E L HPFFK
Sbjct: 346 DAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFK 401
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 164/303 (54%), Gaps = 25/303 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN-----------LREVKC 52
Y++ + + SGS+G V V+ G VAIK + + S + +N LRE++
Sbjct: 24 YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 53 LRKLNHPNIVKVKELIVE-----KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAW 107
L +HPNI+ ++++ V ++ V E M+ +L Q++ ++ + S ++ +
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH---DQRIVISPQHIQYF 139
Query: 108 LFQVFRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWY 166
++ + GL +H+ G HRDL P N+L++ I I DF LARE A T V RWY
Sbjct: 140 MYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWY 199
Query: 167 QAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWA 226
+APE++ + ++ VDMW+ G +MAE+ + LF+G+ +Q+ KI V+G+P ++
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259
Query: 227 DGLRQAMAINYQFPQLSGVNL---SALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
A +Y LS V +A++P+A A++LI + ++P +R + +AL+HP
Sbjct: 260 -MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318
Query: 284 FFK 286
+F+
Sbjct: 319 YFE 321
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 157/307 (51%), Gaps = 33/307 (10%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIV 62
+Y K LG G G V+ AV+ + VAIK + + + LRE+K +R+L+H NIV
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 63 KVKELI--------------VEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWL 108
KV E++ E +V+ V E M+ +L ++E Q E + ++
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE-----QGPLLEEHARLFM 126
Query: 109 FQVFRGLDYMHQQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYT------ER 160
+Q+ RGL Y+H HRDLKP NL ++ +KI DFGLAR +D P Y+ E
Sbjct: 127 YQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMD--PHYSHKGHLSEG 184
Query: 161 VGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSP 220
+ T+WY++P +L Y+ +DMWA G I AE+L + LF G E +QM I + P
Sbjct: 185 LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI--P 242
Query: 221 TMDSWADGLRQAMAINYQFPQLSGVN--LSALMPSASEDAINLIESLCSWDPCKRPTAAE 278
+ ++ Y ++ + L+ L+P S +A++ +E + ++ P R TA E
Sbjct: 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEE 302
Query: 279 ALQHPFF 285
AL HP+
Sbjct: 303 ALSHPYM 309
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 164/303 (54%), Gaps = 25/303 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN-----------LREVKC 52
Y++ + + SGS+G V V+ G VAIK + + S + +N LRE++
Sbjct: 24 YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 53 LRKLNHPNIVKVKELIVE-----KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAW 107
L +HPNI+ ++++ V ++ V E M+ +L Q++ ++ + S ++ +
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH---DQRIVISPQHIQYF 139
Query: 108 LFQVFRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWY 166
++ + GL +H+ G HRDL P N+L++ I I DF LARE A T V RWY
Sbjct: 140 MYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWY 199
Query: 167 QAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWA 226
+APE++ + ++ VDMW+ G +MAE+ + LF+G+ +Q+ KI V+G+P ++
Sbjct: 200 RAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVV 259
Query: 227 DGLRQAMAINYQFPQLSGVNL---SALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
A +Y LS V +A++P+A A++LI + ++P +R + +AL+HP
Sbjct: 260 -MFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318
Query: 284 FFK 286
+F+
Sbjct: 319 YFE 321
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/348 (29%), Positives = 168/348 (48%), Gaps = 70/348 (20%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN----LREVKCLRKLN 57
+ Y + +G GS+G V+ A +K++ + VAIK + + + E ++ LRE+ L +L
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--EDLIDCKRILREITILNRLK 83
Query: 58 HPNIVKVKELIVEKG-----NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
I+++ +LI+ ++ V E +L +L + +E +K L+ +
Sbjct: 84 SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT----PIFLTEEHIKTILYNLL 139
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFP---------------P 156
G +++H+ G HRDLKP N L++Q ++K+ DFGLAR I++ P
Sbjct: 140 LGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP 199
Query: 157 Y--------TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFR---------- 198
+ T V TRWY+APE++ Y+ +D+W+ G I AELL
Sbjct: 200 HNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNR 259
Query: 199 -PLFQGTD-----------------EADQMYKICSVLGSPTMDSWADGLRQAMAINY--Q 238
PLF G+ DQ+ I +++G+PT D + + + I Y
Sbjct: 260 FPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKN-INKPEVIKYIKL 318
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
FP +NL PS S+D INL+ES+ ++P KR T +AL HP+ K
Sbjct: 319 FPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLK 366
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 168/338 (49%), Gaps = 54/338 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+KYSL K LG+GSFG V + + SG+ A LKK + N RE+ ++ L+H NI
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFA---LKKVLQDPRYKN-RELDIMKVLDHVNI 62
Query: 62 VKVKELIVEKGN--------------------------------------VFFVFECMQC 83
+K+ + G+ + + E +
Sbjct: 63 IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122
Query: 84 NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVS--QGTIK 141
L++++++ + + + + +++Q+FR + ++H G HRD+KP+NLLV+ T+K
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLK 182
Query: 142 IADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLF 201
+ DFG A+++ P + +R+Y+APE++ + Y+ +D+W++G + EL+L +PLF
Sbjct: 183 LCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242
Query: 202 QGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQLSGVNLSALMPSASED-AIN 260
G DQ+ +I ++G+PT + + +FP L + ++P + AI+
Sbjct: 243 SGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV--RFPTLKAKDWRKILPEGTPSLAID 300
Query: 261 LIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLRST 298
L+E + ++P R EA+ HPFF HLR++
Sbjct: 301 LLEQILRYEPDLRINPYEAMAHPFFD-------HLRNS 331
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 156/308 (50%), Gaps = 32/308 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + G VA+K L + + + RE+ L+ +NH
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q++ + +++ L+Q+
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM------SYLLYQML 134
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEV 194
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM EL+ +FQGTD DQ K+ LG+P+ + A Q
Sbjct: 195 ILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMA--ALQ 251
Query: 232 AMAINY--QFPQLSGVNLSAL-----MPSASE-------DAINLIESLCSWDPCKRPTAA 277
NY P G+ L PS SE A +L+ + DP KR +
Sbjct: 252 PTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVD 311
Query: 278 EALQHPFF 285
EAL+HP+
Sbjct: 312 EALRHPYI 319
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 173/342 (50%), Gaps = 44/342 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHP 59
E+Y++ LG GSFG V + ++ + + A+K + K+ ++ K + LREV+ L+KL+HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 60 NIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQ--KQQLFSESAVKAWLFQVFRGLDY 117
NI+K+ E++ + + + V E LY E + K++ FSE + QVF G+ Y
Sbjct: 82 NIMKLFEILEDSSSFYIVGE-----LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 118 MHQQGYFHRDLKPENLLVSQG----TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF 173
MH+ HRDLKPEN+L+ IKI DFGL+ +R+GT +Y APE+L
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL- 195
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
G Y K D+W+ G I+ LL P F G +E D + ++ +
Sbjct: 196 -RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV-----------------ETG 237
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPP 293
+ PQ + S+DA +LI + ++ P R TA + L+HP+ ++ P
Sbjct: 238 KYAFDLPQWRTI---------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETP 288
Query: 294 HLRSTPAVAATRRGMLKQQGDRIDAE-ALPYPKIVKQLSPLD 334
+ P++ + + + Q ++ A+ AL Y + +L+ LD
Sbjct: 289 TISDLPSLESAMTNIRQFQAEKKLAQAALLY--MASKLTTLD 328
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 147 bits (370), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 32/308 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + G VA+K L + + + RE+ L+ +NH
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q++ + +++ L+Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y++ VD+W++G IM EL+ +FQGTD DQ K+ LG+P+ + A Q
Sbjct: 197 ILGMG-YAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMA--ALQ 253
Query: 232 AMAINY--QFPQLSGVNLSAL-----MPSASE-------DAINLIESLCSWDPCKRPTAA 277
NY P+ G+ L PS SE A +L+ + DP KR +
Sbjct: 254 PTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVD 313
Query: 278 EALQHPFF 285
EAL+HP+
Sbjct: 314 EALRHPYI 321
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 253
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 254 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 313
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 314 DALQHPYIN-VWYDPAEVEAPP 334
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 253
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 254 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 313
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 314 DALQHPYIN-VWYDPAEVEAPP 334
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM------SYLLYQML 129
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 130 XGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 190 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 246
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 306
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 307 DALQHPYIN-VWYDPAEVEAPP 327
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 32/308 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 253
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 254 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 313
Query: 278 EALQHPFF 285
+ALQHP+
Sbjct: 314 DALQHPYI 321
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 155/303 (51%), Gaps = 21/303 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREK--CLNLREVKCLRKLNH 58
+ KY K+G G+FG V++A ++ +G+ VA+K + +E LRE+K L+ L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 59 PNIVKVKELIVEK--------GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQ 110
N+V + E+ K G+++ VF+ + +L L+ K F+ S +K +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQM 133
Query: 111 VFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREI----DAFPP-YTERVGTR 164
+ GL Y+H+ HRD+K N+L+++ G +K+ADFGLAR ++ P Y RV T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS 224
WY+ PE+L Y +D+W G IMAE+ P+ QG E Q+ I + GS T +
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 253
Query: 225 WADGLRQAMAINYQFPQLSGVNLSALMPSASED--AINLIESLCSWDPCKRPTAAEALQH 282
W + + + + + + + D A++LI+ L DP +R + +AL H
Sbjct: 254 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 283 PFF 285
FF
Sbjct: 314 DFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 155/303 (51%), Gaps = 21/303 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREK--CLNLREVKCLRKLNH 58
+ KY K+G G+FG V++A ++ +G+ VA+K + +E LRE+K L+ L H
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 59 PNIVKVKELIVEK--------GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQ 110
N+V + E+ K G+++ VF+ + +L L+ K F+ S +K +
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQM 132
Query: 111 VFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREI----DAFPP-YTERVGTR 164
+ GL Y+H+ HRD+K N+L+++ G +K+ADFGLAR ++ P Y RV T
Sbjct: 133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 192
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS 224
WY+ PE+L Y +D+W G IMAE+ P+ QG E Q+ I + GS T +
Sbjct: 193 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252
Query: 225 WADGLRQAMAINYQFPQLSGVNLSALMPSASED--AINLIESLCSWDPCKRPTAAEALQH 282
W + + + + + + + D A++LI+ L DP +R + +AL H
Sbjct: 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312
Query: 283 PFF 285
FF
Sbjct: 313 DFF 315
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 155/323 (47%), Gaps = 35/323 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPT---MDSWADG 228
+ G Y VD+W++G IM E++ LF GTD DQ K+ LG+P+ M
Sbjct: 197 ILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTA 276
+R + P+ +G + L P + A +L+ + D KR +
Sbjct: 256 VRTYVE---NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 277 AEALQHPFFKRCLYVPPHLRSTP 299
EALQHP+ Y P + P
Sbjct: 313 DEALQHPYIN-VWYDPSEAEAPP 334
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 155/303 (51%), Gaps = 21/303 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREK--CLNLREVKCLRKLNH 58
+ KY K+G G+FG V++A ++ +G+ VA+K + +E LRE+K L+ L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 59 PNIVKVKELIVEK--------GNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQ 110
N+V + E+ K G+++ VF+ + +L L+ K F+ S +K +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQM 133
Query: 111 VFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREI----DAFPP-YTERVGTR 164
+ GL Y+H+ HRD+K N+L+++ G +K+ADFGLAR ++ P Y RV T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS 224
WY+ PE+L Y +D+W G IMAE+ P+ QG E Q+ I + GS T +
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 253
Query: 225 WADGLRQAMAINYQFPQLSGVNLSALMPSASED--AINLIESLCSWDPCKRPTAAEALQH 282
W + + + + + + + D A++LI+ L DP +R + +AL H
Sbjct: 254 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 283 PFF 285
FF
Sbjct: 314 DFF 316
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 154/308 (50%), Gaps = 32/308 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 253
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 254 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 313
Query: 278 EALQHPFF 285
+ALQHP+
Sbjct: 314 DALQHPYI 321
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 155/323 (47%), Gaps = 35/323 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPT---MDSWADG 228
+ G Y VD+W++G IM E++ LF GTD DQ K+ LG+P+ M
Sbjct: 197 ILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTA 276
+R + P+ +G + L P + A +L+ + D KR +
Sbjct: 256 VRTYVE---NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 277 AEALQHPFFKRCLYVPPHLRSTP 299
EALQHP+ Y P + P
Sbjct: 313 DEALQHPYIN-VWYDPSEAEAPP 334
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 142 bits (357), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQML 137
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 198 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 254
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 255 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 314
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 315 DALQHPYIN-VWYDPAEVEAPP 335
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 41/294 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHP 59
E+Y++ LG GSFG V + ++ + + A+K + K+ ++ K + LREV+ L+KL+HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 60 NIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQ--KQQLFSESAVKAWLFQVFRGLDY 117
NI+K+ E++ + + + V E LY E + K++ FSE + QVF G+ Y
Sbjct: 82 NIMKLFEILEDSSSFYIVGE-----LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 118 MHQQGYFHRDLKPENLLVSQG----TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF 173
MH+ HRDLKPEN+L+ IKI DFGL+ +R+GT +Y APE+L
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL- 195
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
G Y K D+W+ G I+ LL P F G +E D + ++ +
Sbjct: 196 -RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV-----------------ETG 237
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
+ PQ + S+DA +LI + ++ P R TA + L+HP+ ++
Sbjct: 238 KYAFDLPQWRTI---------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 151/294 (51%), Gaps = 41/294 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHP 59
E+Y++ LG GSFG V + ++ + + A+K + K+ ++ K + LREV+ L+KL+HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 60 NIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQ--KQQLFSESAVKAWLFQVFRGLDY 117
NI+K+ E++ + + + V E LY E + K++ FSE + QVF G+ Y
Sbjct: 82 NIMKLFEILEDSSSFYIVGE-----LYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 118 MHQQGYFHRDLKPENLLVSQG----TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF 173
MH+ HRDLKPEN+L+ IKI DFGL+ +R+GT +Y APE+L
Sbjct: 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVL- 195
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
G Y K D+W+ G I+ LL P F G +E D + ++ +
Sbjct: 196 -RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV-----------------ETG 237
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
+ PQ + S+DA +LI + ++ P R TA + L+HP+ ++
Sbjct: 238 KYAFDLPQWRTI---------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQML 130
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 191 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 247
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 248 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 307
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 308 DALQHPYIN-VWYDPAEVEAPP 328
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQML 174
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 235 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 291
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 351
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 352 DALQHPYI-NVWYDPAEVEAPP 372
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 22 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQML 135
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 136 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 195
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 196 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 252
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 253 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 312
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 313 DALQHPYIN-VWYDPAEVEAPP 333
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQML 130
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 191 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 247
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 248 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 307
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 308 DALQHPYIN-VWYDPAEVEAPP 328
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQML 137
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 198 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 254
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 255 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 314
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 315 DALQHPYIN-VWYDPAEVEAPP 335
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 253
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 254 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 313
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 314 DALQHPYIN-VWYDPAEVEAPP 334
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQML 174
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 175 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 234
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 235 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 291
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 351
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 352 DALQHPYI-NVWYDPAEVEAPP 372
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQML 129
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 130 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 189
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 190 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 246
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 306
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 307 DALQHPYIN-VWYDPAEVEAPP 327
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 141 bits (356), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 159/322 (49%), Gaps = 33/322 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 59 PNIVKV------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + ++ + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P + Q
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK--LQ 253
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G+ L P + + A +L+ + DP KR +
Sbjct: 254 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 313
Query: 278 EALQHPFFKRCLYVPPHLRSTP 299
+ALQHP+ Y P + + P
Sbjct: 314 DALQHPYIN-VWYDPAEVEAPP 334
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 152/320 (47%), Gaps = 29/320 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ LF GTD DQ K+ LG+P+ +
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 280 LQHPFFKRCLYVPPHLRSTP 299
LQHP+ Y P + P
Sbjct: 316 LQHPYIN-VWYDPSEAEAPP 334
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 152/320 (47%), Gaps = 29/320 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ LF GTD DQ K+ LG+P+ +
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 280 LQHPFFKRCLYVPPHLRSTP 299
LQHP+ Y P + P
Sbjct: 316 LQHPYIN-VWYDPSEAEAPP 334
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 154/303 (50%), Gaps = 21/303 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREK--CLNLREVKCLRKLNH 58
+ KY K+G G+FG V++A ++ +G+ VA+K + +E LRE+K L+ L H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 59 PNIVKVKELIVEKGN--------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQ 110
N+V + E+ K + ++ VF+ + +L L+ K F+ S +K +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK---FTLSEIKRVMQM 133
Query: 111 VFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREI----DAFPP-YTERVGTR 164
+ GL Y+H+ HRD+K N+L+++ G +K+ADFGLAR ++ P Y RV T
Sbjct: 134 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTL 193
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS 224
WY+ PE+L Y +D+W G IMAE+ P+ QG E Q+ I + GS T +
Sbjct: 194 WYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 253
Query: 225 WADGLRQAMAINYQFPQLSGVNLSALMPSASED--AINLIESLCSWDPCKRPTAAEALQH 282
W + + + + + + + D A++LI+ L DP +R + +AL H
Sbjct: 254 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 313
Query: 283 PFF 285
FF
Sbjct: 314 DFF 316
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 154/299 (51%), Gaps = 26/299 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH-PN 60
+ Y L +KLG G + V++A+N + E V +K LK +K RE+K L L PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKNKIKREIKILENLRGGPN 93
Query: 61 IVKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
I+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 119 HQQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSG 176
H G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 177 LYSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
+Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + +
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIEL 265
Query: 236 NYQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ +F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 266 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 146/293 (49%), Gaps = 40/293 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNH 58
++Y + LG GSFG V +K +G+ A+K + K ++K LREV+ L++L+H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PNI+K+ E +KG + V E L+ + ++K+ FSE + QV G+ Y
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITY 141
Query: 118 MHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF 173
MH+ HRDLKPENLL+ I+I DFGL+ +A +++GT +Y APE+L
Sbjct: 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL- 200
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
G Y K D+W+ G I+ LL P F G +E D + K+ +
Sbjct: 201 -HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV-----------------EKG 242
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
++ PQ V SE A +LI + ++ P R +A +AL H + +
Sbjct: 243 KYTFELPQWKKV---------SESAKDLIRKMLTYVPSMRISARDALDHEWIQ 286
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 146/293 (49%), Gaps = 40/293 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNH 58
++Y + LG GSFG V +K +G+ A+K + K ++K LREV+ L++L+H
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PNI+K+ E +KG + V E L+ + ++K+ FSE + QV G+ Y
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITY 164
Query: 118 MHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF 173
MH+ HRDLKPENLL+ I+I DFGL+ +A +++GT +Y APE+L
Sbjct: 165 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 224
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
G Y K D+W+ G I+ LL P F G +E D + K+ +
Sbjct: 225 --GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV-----------------EKG 265
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
++ PQ V SE A +LI + ++ P R +A +AL H + +
Sbjct: 266 KYTFELPQWKKV---------SESAKDLIRKMLTYVPSMRISARDALDHEWIQ 309
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 146/293 (49%), Gaps = 40/293 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNH 58
++Y + LG GSFG V +K +G+ A+K + K ++K LREV+ L++L+H
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PNI+K+ E +KG + V E L+ + ++K+ FSE + QV G+ Y
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITY 165
Query: 118 MHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF 173
MH+ HRDLKPENLL+ I+I DFGL+ +A +++GT +Y APE+L
Sbjct: 166 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH 225
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
G Y K D+W+ G I+ LL P F G +E D + K+ +
Sbjct: 226 --GTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV-----------------EKG 266
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
++ PQ V SE A +LI + ++ P R +A +AL H + +
Sbjct: 267 KYTFELPQWKKV---------SESAKDLIRKMLTYVPSMRISARDALDHEWIQ 310
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 152/320 (47%), Gaps = 29/320 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ LF GTD DQ K+ LG+P+ +
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 280 LQHPFFKRCLYVPPHLRSTP 299
LQHP+ Y P + P
Sbjct: 316 LQHPYIN-VWYDPSEAEAPP 334
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 168/351 (47%), Gaps = 73/351 (20%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN----LREVKCLRKLN 57
+ Y + +G GS+G V+ A +K++ + VAIK + + + E ++ LRE+ L +L
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMF--EDLIDCKRILREITILNRLK 85
Query: 58 HPNIVKVKELIVEKG-----NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
I+++ +LI+ + ++ V E +L +L + +E VK L+ +
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKT----PIFLTEQHVKTILYNLL 141
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFP---------------- 155
G ++H+ G HRDLKP N L++Q ++KI DFGLAR I++
Sbjct: 142 LGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEE 201
Query: 156 --PY--------TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFR------- 198
P+ T V TRWY+APE++ Y++ +D+W+ G I AELL
Sbjct: 202 PGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNP 261
Query: 199 ----PLFQGT-----------------DEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
PLF G+ DQ+ I +V+G+P + +Q + I Y
Sbjct: 262 TNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEV-IKY 320
Query: 238 --QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
FP G++LS S S++ I+L+ES+ ++ KR T +AL HP+ K
Sbjct: 321 IKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLK 371
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/293 (32%), Positives = 146/293 (49%), Gaps = 40/293 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNH 58
++Y + LG GSFG V +K +G+ A+K + K ++K LREV+ L++L+H
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PNI+K+ E +KG + V E L+ + ++K+ FSE + QV G+ Y
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITY 147
Query: 118 MHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF 173
MH+ HRDLKPENLL+ I+I DFGL+ +A +++GT +Y APE+L
Sbjct: 148 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL- 206
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
G Y K D+W+ G I+ LL P F G +E D + K+ +
Sbjct: 207 -HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV-----------------EKG 248
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
++ PQ V SE A +LI + ++ P R +A +AL H + +
Sbjct: 249 KYTFELPQWKKV---------SESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 138 bits (348), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 152/320 (47%), Gaps = 29/320 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ LF GTD DQ K+ LG+P+ +
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 280 LQHPFFKRCLYVPPHLRSTP 299
LQHP+ Y P + P
Sbjct: 316 LQHPYIN-VWYDPSEAEAPP 334
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 148/306 (48%), Gaps = 28/306 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ LF GTD DQ K+ LG+P+ +
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPT 255
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 280 LQHPFF 285
LQHP+
Sbjct: 316 LQHPYI 321
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 147/306 (48%), Gaps = 28/306 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ LF GTD DQ K+ LG+P +
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEA 315
Query: 280 LQHPFF 285
LQHP+
Sbjct: 316 LQHPYI 321
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 147/306 (48%), Gaps = 28/306 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ LF GTD DQ K+ LG+P +
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 280 LQHPFF 285
LQHP+
Sbjct: 316 LQHPYI 321
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 147/306 (48%), Gaps = 28/306 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQML 137
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 138 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 197
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ LF GTD DQ K+ LG+P +
Sbjct: 198 ILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 256
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 257 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 316
Query: 280 LQHPFF 285
LQHP+
Sbjct: 317 LQHPYI 322
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 28/306 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 28 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQML 141
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 142 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 201
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P +
Sbjct: 202 ILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 260
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 261 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 320
Query: 280 LQHPFF 285
LQHP+
Sbjct: 321 LQHPYI 326
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 28/306 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 17 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQML 130
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR T V TR+Y+APE+
Sbjct: 131 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV 190
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P +
Sbjct: 191 ILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 249
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 250 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 309
Query: 280 LQHPFF 285
LQHP+
Sbjct: 310 LQHPYI 315
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 136 bits (342), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 162/302 (53%), Gaps = 22/302 (7%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
M+++ + + G G+FG V K +G VAIK + + R + L+ ++ L L+HPN
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPN 80
Query: 61 IVKVKELIVEKG-----NVFF--VFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
IV+++ G +++ V E + L++ ++Q +K +LFQ+ R
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIR 140
Query: 114 GLDYMH--QQGYFHRDLKPENLLVSQ--GTIKIADFGLAREIDAFPPYTERVGTRWYQAP 169
+ +H HRD+KP N+LV++ GT+K+ DFG A+++ P + +R+Y+AP
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAP 200
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGL 229
E++F + Y++ VD+W++G I AE++L P+F+G + A Q+++I VLG P+ + L
Sbjct: 201 ELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREV----L 256
Query: 230 RQ--AMAINYQFPQLSGVNLSALMPSAS----EDAINLIESLCSWDPCKRPTAAEALQHP 283
R+ + G+ S + S ++A +L+ +L + P +R EAL HP
Sbjct: 257 RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316
Query: 284 FF 285
+F
Sbjct: 317 YF 318
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 143/293 (48%), Gaps = 40/293 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNH 58
++Y + LG GSFG V +K +G+ A+K + K ++K LREV+ L++L+H
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PNI K+ E +KG + V E L+ + ++K+ FSE + QV G+ Y
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITY 141
Query: 118 MHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF 173
H+ HRDLKPENLL+ I+I DFGL+ +A +++GT +Y APE+L
Sbjct: 142 XHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL- 200
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
G Y K D+W+ G I+ LL P F G +E D + K+ +
Sbjct: 201 -HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV-----------------EKG 242
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
++ PQ V SE A +LI ++ P R +A +AL H + +
Sbjct: 243 KYTFELPQWKKV---------SESAKDLIRKXLTYVPSXRISARDALDHEWIQ 286
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 146/291 (50%), Gaps = 38/291 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS---YSREKCLNLREVKCLRKLNH 58
++Y KKLGSG++G V +K +G AIK +KKS + L EV L++L+H
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNI+K+ E +K N + V E + +L + +Q+ FSE + QV G Y+
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGG--ELFDEIILRQK-FSEVDAAVIMKQVLSGTTYL 137
Query: 119 HQQGYFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
H+ HRDLKPENLL+ + IKI DFGL+ + ER+GT +Y APE+L K
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 197
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
Y K D+W+ G I+ LL P F G + + + ++ +
Sbjct: 198 K--YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV-----------------EKGK 238
Query: 235 INYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
++ P + V S++A L++ + +++P KR +A EAL HP+
Sbjct: 239 FSFDPPDWTQV---------SDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 135 bits (339), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 151/308 (49%), Gaps = 32/308 (10%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P ++ L Q
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC-PAFMKKL-Q 253
Query: 232 AMAINY--QFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAA 277
NY P+ +G + L P + A +L+ + D KR +
Sbjct: 254 PTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 278 EALQHPFF 285
EALQHP+
Sbjct: 314 EALQHPYI 321
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 134 bits (338), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 146/306 (47%), Gaps = 28/306 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 25 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQML 138
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR V TR+Y+APE+
Sbjct: 139 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEV 198
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ LF GTD DQ K+ LG+P +
Sbjct: 199 ILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 257
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 258 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 317
Query: 280 LQHPFF 285
LQHP+
Sbjct: 318 LQHPYI 323
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 146/306 (47%), Gaps = 28/306 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH 58
+++Y K +GSG+ G V A + VAIK L + + + RE+ ++ +NH
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 59 PNIVKVKELIV------EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
NI+ + + E +V+ V E M NL Q+++ + +++ L+Q+
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERM------SYLLYQML 136
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
G+ ++H G HRDLKP N++V S T+KI DFGLAR V TR+Y+APE+
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV 196
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+ G Y VD+W++G IM E++ + LF G D DQ K+ LG+P +
Sbjct: 197 ILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 232 AMAINYQFPQLSGVNLSALMPSA------------SEDAINLIESLCSWDPCKRPTAAEA 279
P+ +G + L P + A +L+ + D KR + EA
Sbjct: 256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 280 LQHPFF 285
LQHP+
Sbjct: 316 LQHPYI 321
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 134 bits (337), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 147/292 (50%), Gaps = 40/292 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS----YSREKCLNLREVKCLRKLN 57
++Y KKLGSG++G V +K +G AIK +KKS S L L EV L++L+
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGAL-LDEVAVLKQLD 62
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPNI+K+ E +K N + V E + +L + +Q+ FSE + QV G Y
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGG--ELFDEIILRQK-FSEVDAAVIMKQVLSGTTY 119
Query: 118 MHQQGYFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQAPEILF 173
+H+ HRDLKPENLL+ + IKI DFGL+ + ER+GT +Y APE+L
Sbjct: 120 LHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLR 179
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
K Y K D+W+ G I+ LL P F G + + + ++ +
Sbjct: 180 KK--YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV-----------------EKG 220
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
++ P + V S++A L++ + +++P KR +A EAL HP+
Sbjct: 221 KFSFDPPDWTQV---------SDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 158/330 (47%), Gaps = 40/330 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK---SYSREKCLNLREVKCLRKLNH 58
E Y KKLGSG++G V +K + AIK ++K S S L L EV L+ L+H
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKL-LEEVAVLKLLDH 95
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNI+K+ + +K N + V EC + +L + + + F+E + QV G+ Y+
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGG--ELFDEIIHRMK-FNEVDAAVIIKQVLSGVTYL 152
Query: 119 HQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
H+ HRDLKPENLL+ IKI DFGL+ + ER+GT +Y APE+L K
Sbjct: 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK 212
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
Y K D+W++G I+ LL P F G + + + K+ G T DS
Sbjct: 213 K--YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK--GKYTFDS---------- 258
Query: 235 INYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPH 294
P+ V SE A +LI+ + +D +R +A +AL+HP+ K
Sbjct: 259 -----PEWKNV---------SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKES 304
Query: 295 LRSTPAVAATRRGMLK-QQGDRIDAEALPY 323
P++A M K Q ++ AL Y
Sbjct: 305 GIELPSLANAIENMRKFQNSQKLAQAALLY 334
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 162/314 (51%), Gaps = 41/314 (13%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVV--AIKALKKS-YSREKCLNLREVKCLRKLNHPNIVKVK 65
K+G G++G V++A K + A+K ++ + S C RE+ LR+L HPN++ ++
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC---REIALLRELKHPNVISLQ 84
Query: 66 ELIVEKGN--VFFVFECMQCNLYQLME------AKKQKQQLFSESAVKAWLFQVFRGLDY 117
++ + + V+ +F+ + +L+ +++ A K+ QL VK+ L+Q+ G+ Y
Sbjct: 85 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQL-PRGMVKSLLYQILDGIHY 143
Query: 118 MHQQGYFHRDLKPENLLV-----SQGTIKIADFGLAREIDA-FPPYTER---VGTRWYQA 168
+H HRDLKP N+LV +G +KIAD G AR ++ P + V T WY+A
Sbjct: 144 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 203
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDE---------ADQMYKICSVLGS 219
PE+L + Y+ +D+WA+G I AELL P+F E DQ+ +I +V+G
Sbjct: 204 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGF 263
Query: 220 PTMDSWAD--GLRQAMAINYQFPQLSGVNLSAL------MPSASEDAINLIESLCSWDPC 271
P W D + + + F + + N S + A +L++ L + DP
Sbjct: 264 PADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPI 323
Query: 272 KRPTAAEALQHPFF 285
KR T+ +A+Q P+F
Sbjct: 324 KRITSEQAMQDPYF 337
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 155/298 (52%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E VA+K LK ++ ++ ++ LR PNI
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLR--GGPNI 94
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+L+ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 149 SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 266
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 159/328 (48%), Gaps = 42/328 (12%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK--KSYSREKCLNLREVKCLRKL---N 57
+Y + K +G GSFG V +A + + VA+K ++ K + R+ +R ++ LRK N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N++ + E + ++ FE + NLY+L+ KK K Q FS V+ + + + LD
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELI--KKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 118 MHQQGYFHRDLKPENLLVSQ---GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
+H+ H DLKPEN+L+ Q IK+ DFG + + YT + +R+Y+APE++
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTX-IQSRFYRAPEVIL- 272
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSP-------------- 220
Y +DMW++G I+AELL PL G DE DQ+ + +LG P
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNF 332
Query: 221 ----------TMDSWADGLRQAMAINYQFPQLSGVNLS-----ALMPSASEDAINLIESL 265
T+ + +DG + +L G S AL ++ ++
Sbjct: 333 VSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQC 392
Query: 266 CSWDPCKRPTAAEALQHPFFKRCLYVPP 293
WDP R T +AL+HP+ +R L PP
Sbjct: 393 LEWDPAVRMTPGQALRHPWLRRRLPKPP 420
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 155/298 (52%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 94
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ +Q ++ ++ +++++ + LDY H
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLRQTLTDYDIRFYMYEILKALDYCH 148
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 266
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 155/328 (47%), Gaps = 42/328 (12%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK--KSYSREKCLNLREVKCLRKL---N 57
+Y + K +G G FG V +A + + VA+K ++ K + R+ +R ++ LRK N
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N++ + E + ++ FE + NLY+L+ KK K Q FS V+ + + + LD
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELI--KKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 118 MHQQGYFHRDLKPENLLVSQ---GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
+H+ H DLKPEN+L+ Q IK+ DFG + + +R+Y+APE++
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS--CYEHQRVYXXIQSRFYRAPEVIL- 272
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSP-------------- 220
Y +DMW++G I+AELL PL G DE DQ+ + +LG P
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNF 332
Query: 221 ----------TMDSWADGLRQAMAINYQFPQLSGVNLS-----ALMPSASEDAINLIESL 265
T+ + +DG + +L G S AL ++ ++
Sbjct: 333 VSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQC 392
Query: 266 CSWDPCKRPTAAEALQHPFFKRCLYVPP 293
WDP R T +AL+HP+ +R L PP
Sbjct: 393 LEWDPAVRMTPGQALRHPWLRRRLPKPP 420
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 94
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 266
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 94
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 266
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 99
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 100 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 153
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 154 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 213
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 214 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 271
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 272 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 93
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 94 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 207
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 265
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 94
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 266
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 127 bits (319), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 94
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 266
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 94
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 266
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 94
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 266
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 94
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 266
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 93
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 94 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 207
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 208 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 265
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 266 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 94
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 149 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 208
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 209 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 266
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 267 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 154/298 (51%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR PNI
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLR--GGPNI 92
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + +++ + VFE + + KQ Q ++ ++ +++++ + LDY H
Sbjct: 93 ITLADIVKDPVSRTPALVFEHVNNTDF------KQLYQTLTDYDIRFYMYEILKALDYCH 146
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
G HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQM 206
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ + P F G D DQ+ +I VLG+ + + D + + ++
Sbjct: 207 YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID--KYNIELD 264
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+F + G + S S +A++ ++ L +D R TA EA++HP+F
Sbjct: 265 PRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 157/324 (48%), Gaps = 42/324 (12%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK--KSYSREKCLNLREVKCLRKL---N 57
+Y + K +G GSFG V +A + + VA+K ++ K + R+ +R ++ LRK N
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N++ + E + ++ FE + NLY+L+ KK K Q FS V+ + + + LD
Sbjct: 158 TMNVIHMLENFTFRNHICMTFELLSMNLYELI--KKNKFQGFSLPLVRKFAHSILQCLDA 215
Query: 118 MHQQGYFHRDLKPENLLVSQ---GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
+H+ H DLKPEN+L+ Q IK+ DFG + + YT + +R+Y+APE++
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQRVYTX-IQSRFYRAPEVIL- 272
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSP-------------- 220
Y +DMW++G I+AELL PL G DE DQ+ + +LG P
Sbjct: 273 GARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNF 332
Query: 221 ----------TMDSWADGLRQAMAINYQFPQLSGVNLS-----ALMPSASEDAINLIESL 265
T+ + +DG + +L G S AL ++ ++
Sbjct: 333 VSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQC 392
Query: 266 CSWDPCKRPTAAEALQHPFFKRCL 289
WDP R T +AL+HP+ +R L
Sbjct: 393 LEWDPAVRMTPGQALRHPWLRRRL 416
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 127 bits (318), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 156/298 (52%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR NI
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLR--GGTNI 95
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+K+ + + + VFE + + KQ Q+ ++ ++ +++++ + LDY H
Sbjct: 96 IKLIDTVKDPVSKTPALVFEYINNTDF------KQLYQILTDFDIRFYMYELLKALDYCH 149
Query: 120 QQGYFHRDLKPENLLVS--QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
+G HRD+KP N+++ Q +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 209
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ R P F G D DQ+ +I VLG+ + + + + ++
Sbjct: 210 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLK--KYHIDLD 267
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
F + G + S S +A++L++ L +D +R TA EA++HP+F
Sbjct: 268 PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 126 bits (317), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 156/298 (52%), Gaps = 24/298 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y L +KLG G + V++A+N + E V +K LK ++ ++ ++ LR NI
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLR--GGTNI 100
Query: 62 VKVKELIVE--KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+K+ + + + VFE + + KQ Q+ ++ ++ +++++ + LDY H
Sbjct: 101 IKLIDTVKDPVSKTPALVFEYINNTDF------KQLYQILTDFDIRFYMYELLKALDYCH 154
Query: 120 QQGYFHRDLKPENLLVS--QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
+G HRD+KP N+++ Q +++ D+GLA Y RV +R+++ PE+L +
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQM 214
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G ++A ++ R P F G D DQ+ +I VLG+ + + + + ++
Sbjct: 215 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLK--KYHIDLD 272
Query: 237 YQFPQLSGVN---------LSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
F + G + S S +A++L++ L +D +R TA EA++HP+F
Sbjct: 273 PHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 148/290 (51%), Gaps = 39/290 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL--KKSYSREKCLNLREVKCLRKLNHPNI 61
Y L ++LG G+F V + V +G+ A K + KK +R+ RE + R L HPNI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
V++ + I E+G+ + +F+ + L++ + A+ + +SE+ + Q+ + + HQ
Sbjct: 84 VRLHDSISEEGHHYLIFDLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHCHQ 139
Query: 121 QGYFHRDLKPENLLVSQ----GTIKIADFGLAREIDAF-PPYTERVGTRWYQAPEILFKS 175
G HRDLKPENLL++ +K+ADFGLA E++ + GT Y +PE+L K
Sbjct: 140 MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
Y VD+WA G I+ LL+ P F D+ ++Y+ Q A
Sbjct: 200 P-YGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQ------------------QIKAG 239
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
Y FP S + + +A +LI + + +P KR TAAEAL+HP+
Sbjct: 240 AYDFP-------SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 148/291 (50%), Gaps = 38/291 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL--KKSYSREKCLNLREVKCLRKLNHP 59
+ Y + ++LG G+F V + V+K +G A K + KK +R+ RE + RKL HP
Sbjct: 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 88
Query: 60 NIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIV++ + I E+ + VF+ + L++ + A+ + +SE+ + Q+ + Y
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYC 144
Query: 119 HQQGYFHRDLKPENLLVSQ----GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
H G HR+LKPENLL++ +K+ADFGLA E++ + GT Y +PE+L K
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL-K 203
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
YS VD+WA G I+ LL+ P F D+ +I +A A
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI-----------------KAGA 246
Query: 235 INYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+Y P+ V + +A +LI+S+ + +P KR TA +AL+ P+
Sbjct: 247 YDYPSPEWDTV---------TPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 149/292 (51%), Gaps = 39/292 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVA--IKALKKSYSREKCLNLREVKCLRKLNHP 59
E+Y L ++LG G+F V + V +G+ A I KK +R+ RE + R L HP
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHP 70
Query: 60 NIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIV++ + I E+G+ + +F+ + L++ + A+ + +SE+ + Q+ + +
Sbjct: 71 NIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHC 126
Query: 119 HQQGYFHRDLKPENLLVSQ----GTIKIADFGLAREIDAF-PPYTERVGTRWYQAPEILF 173
HQ G HR+LKPENLL++ +K+ADFGLA E++ + GT Y +PE+L
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLR 186
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
K Y VD+WA G I+ LL+ P F D+ ++Y+ Q
Sbjct: 187 KDP-YGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQ------------------QIK 226
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A Y FP S + + +A +LI + + +P KR TAAEAL+HP+
Sbjct: 227 AGAYDFP-------SPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 148/291 (50%), Gaps = 38/291 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL--KKSYSREKCLNLREVKCLRKLNHP 59
+ Y + ++LG G+F V + V+K +G A K + KK +R+ RE + RKL HP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 60 NIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIV++ + I E+ + VF+ + L++ + A+ + +SE+ + Q+ + Y
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYC 121
Query: 119 HQQGYFHRDLKPENLLVSQ----GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
H G HR+LKPENLL++ +K+ADFGLA E++ + GT Y +PE+L K
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL-K 180
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
YS VD+WA G I+ LL+ P F D+ +I +A A
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI-----------------KAGA 223
Query: 235 INYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+Y P+ V + +A +LI+S+ + +P KR TA +AL+ P+
Sbjct: 224 YDYPSPEWDTV---------TPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 148/291 (50%), Gaps = 38/291 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL--KKSYSREKCLNLREVKCLRKLNHP 59
+ Y + ++LG G+F V + V+K +G A K + KK +R+ RE + RKL HP
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 65
Query: 60 NIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIV++ + I E+ + VF+ + L++ + A+ + +SE+ + Q+ + Y
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYC 121
Query: 119 HQQGYFHRDLKPENLLVSQ----GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
H G HR+LKPENLL++ +K+ADFGLA E++ + GT Y +PE+L K
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL-K 180
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
YS VD+WA G I+ LL+ P F D+ +I +A A
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI-----------------KAGA 223
Query: 235 INYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+Y P+ V + +A +LI+S+ + +P KR TA +AL+ P+
Sbjct: 224 YDYPSPEWDTV---------TPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 148/291 (50%), Gaps = 38/291 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL--KKSYSREKCLNLREVKCLRKLNHP 59
+ Y + ++LG G+F V + V+K +G A K + KK +R+ RE + RKL HP
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHP 64
Query: 60 NIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIV++ + I E+ + VF+ + L++ + A+ + +SE+ + Q+ + Y
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYC 120
Query: 119 HQQGYFHRDLKPENLLVSQ----GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
H G HR+LKPENLL++ +K+ADFGLA E++ + GT Y +PE+L K
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL-K 179
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
YS VD+WA G I+ LL+ P F D+ +I +A A
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI-----------------KAGA 222
Query: 235 INYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+Y P+ V + +A +LI+S+ + +P KR TA +AL+ P+
Sbjct: 223 YDYPSPEWDTV---------TPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 146/291 (50%), Gaps = 39/291 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL--KKSYSREKCLNLREVKCLRKLNHP 59
+ Y L ++LG G+F V + V K + A K + KK +R+ RE + R L HP
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 60 NIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIV++ + I E+G + VF+ + L++ + A+ + +SE+ + Q+ ++++
Sbjct: 91 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----EYYSEADASHCIHQILESVNHI 146
Query: 119 HQQGYFHRDLKPENLLVSQ----GTIKIADFGLAREIDAF-PPYTERVGTRWYQAPEILF 173
HQ HRDLKPENLL++ +K+ADFGLA E+ + GT Y +PE+L
Sbjct: 147 HQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLR 206
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
K Y VD+WA G I+ LL+ P F D+ ++Y+ Q
Sbjct: 207 KDP-YGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQ------------------QIK 246
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
A Y FP S + + +A NLI + + +P KR TA +AL+HP+
Sbjct: 247 AGAYDFP-------SPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPW 290
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 121 bits (303), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 39/292 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL--KKSYSREKCLNLREVKCLRKLNHP 59
++Y L ++LG G+F V + + +G+ A K + KK +R+ RE + R L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 60 NIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIV++ + I E+G + VF+ + L++ + A+ + +SE+ + Q+ +++
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----EYYSEADASHCIQQILESVNHC 119
Query: 119 HQQGYFHRDLKPENLLVSQ----GTIKIADFGLAREIDAF-PPYTERVGTRWYQAPEILF 173
H G HRDLKPENLL++ +K+ADFGLA E+ + GT Y +PE+L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
K Y VDMWA G I+ LL+ P F D+ ++Y+ Q
Sbjct: 180 KDP-YGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQ------------------QIK 219
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A Y FP S + + +A +LI + + +P KR TA+EAL+HP+
Sbjct: 220 AGAYDFP-------SPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 39/292 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL--KKSYSREKCLNLREVKCLRKLNHP 59
++Y L ++LG G+F V + + +G+ A K + KK +R+ RE + R L HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 60 NIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIV++ + I E+G + VF+ + L++ + A+ + +SE+ + Q+ +++
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----EYYSEADASHCIQQILESVNHC 119
Query: 119 HQQGYFHRDLKPENLLVSQ----GTIKIADFGLAREIDAF-PPYTERVGTRWYQAPEILF 173
H G HRDLKPENLL++ +K+ADFGLA E+ + GT Y +PE+L
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
K Y VDMWA G I+ LL+ P F D+ ++Y+ Q
Sbjct: 180 KDP-YGKPVDMWACGVILYILLVGYPPFWDEDQ-HRLYQ------------------QIK 219
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
A Y FP S + + +A +LI + + +P KR TA+EAL+HP+
Sbjct: 220 AGAYDFP-------SPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 156/304 (51%), Gaps = 30/304 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + +K+G G + V++ +N ++ E IK LK ++ ++ ++ L PNI
Sbjct: 52 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--XGGPNI 109
Query: 62 VKVKELIVEKGNVF--FVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
VK+ +++ ++ + +FE + ++++ ++ ++ +++++ + LDY H
Sbjct: 110 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT------LTDYDIRYYIYELLKALDYCH 163
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
QG HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L
Sbjct: 164 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 223
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G + A ++ + P F G D DQ+ KI VLG+ ++++ + R +
Sbjct: 224 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELD-- 281
Query: 237 YQFPQLSG-VNLSALMP-----------SASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
PQL V + P S +AI+ ++ L +D +R TA EA+ HP+
Sbjct: 282 ---PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 338
Query: 285 FKRC 288
F++
Sbjct: 339 FQQV 342
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 120 bits (302), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 156/304 (51%), Gaps = 30/304 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + +K+G G + V++ +N ++ E IK LK ++ ++ ++ L + PNI
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--MGGPNI 88
Query: 62 VKVKELIVEKGNVF--FVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
VK+ +++ ++ + +FE + ++++ ++ ++ +++++ + LDY H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT------LTDYDIRYYIYELLKALDYCH 142
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
QG HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G + A ++ + P F G D DQ+ KI VLG+ ++ + + R +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD-- 260
Query: 237 YQFPQLSG-VNLSALMP-----------SASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
PQL V + P S +AI+ ++ L +D +R TA EA+ HP+
Sbjct: 261 ---PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
Query: 285 FKRC 288
F++
Sbjct: 318 FQQV 321
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 129/239 (53%), Gaps = 8/239 (3%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY--SREKCLNLREVKCLRKLNH 58
MEKY +K+G GSFG + G IK + S S+E+ + REV L + H
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH 82
Query: 59 PNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PNIV+ +E E G+++ V + C +L++ + A QK LF E + W Q+ L +
Sbjct: 83 PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA--QKGVLFQEDQILDWFVQICLALKH 140
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTER-VGTRWYQAPEILFKS 175
+H + HRD+K +N+ +++ GT+++ DFG+AR +++ +GT +Y +PEI ++
Sbjct: 141 VHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEIC-EN 199
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
Y++K D+WA+G ++ EL + F+ + + KI S P ++ LR ++
Sbjct: 200 KPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVS 258
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 138/291 (47%), Gaps = 35/291 (12%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHPNIV 62
+ +KLGSG+FG V + SG IK + K S+ + E++ L+ L+HPNI+
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 63 KVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K+ E+ + N++ V E C L + + + + + + SE V + Q+ L Y H Q
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 122 GYFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
H+DLKPEN+L + IKI DFGLA + T GT Y APE+ FK +
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV-FKRDV 202
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
+ K D+W+ G +M LL F GT + K Y
Sbjct: 203 -TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK----------------------ATY 239
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
+ P + V L P A++L++ + + DP +RP+AA+ L H +FK+
Sbjct: 240 KEPNYA-VECRPLTPQ----AVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 155/304 (50%), Gaps = 30/304 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + +K+G G + V++ +N ++ E IK LK ++ ++ ++ L PNI
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLX--GGPNI 89
Query: 62 VKVKELIVEKGNVF--FVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
VK+ +++ ++ + +FE + ++++ ++ ++ +++++ + LDY H
Sbjct: 90 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT------LTDYDIRYYIYELLKALDYCH 143
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
QG HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G + A ++ + P F G D DQ+ KI VLG+ ++ + + R +
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD-- 261
Query: 237 YQFPQLSG-VNLSALMP-----------SASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
PQL V + P S +AI+ ++ L +D +R TA EA+ HP+
Sbjct: 262 ---PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 318
Query: 285 FKRC 288
F++
Sbjct: 319 FQQV 322
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 155/304 (50%), Gaps = 30/304 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + +K+G G + V++ +N ++ E IK LK ++ ++ ++ L PNI
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLX--GGPNI 88
Query: 62 VKVKELIVEKGNVF--FVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
VK+ +++ ++ + +FE + ++++ ++ ++ +++++ + LDY H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT------LTDYDIRYYIYELLKALDYCH 142
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
QG HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G + A ++ + P F G D DQ+ KI VLG+ ++ + + R +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD-- 260
Query: 237 YQFPQLSG-VNLSALMP-----------SASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
PQL V + P S +AI+ ++ L +D +R TA EA+ HP+
Sbjct: 261 ---PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
Query: 285 FKRC 288
F++
Sbjct: 318 FQQV 321
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 155/304 (50%), Gaps = 30/304 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + +K+G G + V++ +N ++ E IK LK ++ ++ ++ L PNI
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--XGGPNI 88
Query: 62 VKVKELIVEKGNVF--FVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
VK+ +++ ++ + +FE + ++++ ++ ++ +++++ + LDY H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT------LTDYDIRYYIYELLKALDYCH 142
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
QG HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G + A ++ + P F G D DQ+ KI VLG+ ++ + + R +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD-- 260
Query: 237 YQFPQLSG-VNLSALMP-----------SASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
PQL V + P S +AI+ ++ L +D +R TA EA+ HP+
Sbjct: 261 ---PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
Query: 285 FKRC 288
F++
Sbjct: 318 FQQV 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 155/304 (50%), Gaps = 30/304 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + +K+G G + V++ +N ++ E IK LK ++ ++ ++ L PNI
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLX--GGPNI 88
Query: 62 VKVKELIVEKGNVF--FVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
VK+ +++ ++ + +FE + ++++ ++ ++ +++++ + LDY H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT------LTDYDIRYYIYELLKALDYCH 142
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
QG HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G + A ++ + P F G D DQ+ KI VLG+ ++ + + R +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD-- 260
Query: 237 YQFPQLSG-VNLSALMP-----------SASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
PQL V + P S +AI+ ++ L +D +R TA EA+ HP+
Sbjct: 261 ---PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
Query: 285 FKRC 288
F++
Sbjct: 318 FQQV 321
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 155/304 (50%), Gaps = 30/304 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + +K+G G + V++ +N ++ E IK LK ++ ++ ++ L PNI
Sbjct: 32 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--CGGPNI 89
Query: 62 VKVKELIVEKGNVF--FVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
VK+ +++ ++ + +FE + ++++ ++ ++ +++++ + LDY H
Sbjct: 90 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT------LTDYDIRYYIYELLKALDYCH 143
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
QG HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L
Sbjct: 144 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 203
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G + A ++ + P F G D DQ+ KI VLG+ ++ + + R +
Sbjct: 204 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD-- 261
Query: 237 YQFPQLSG-VNLSALMP-----------SASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
PQL V + P S +AI+ ++ L +D +R TA EA+ HP+
Sbjct: 262 ---PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 318
Query: 285 FKRC 288
F++
Sbjct: 319 FQQV 322
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 155/304 (50%), Gaps = 30/304 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + +K+G G + V++ +N ++ E IK LK ++ ++ ++ L PNI
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--CGGPNI 88
Query: 62 VKVKELIVEKGNVF--FVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
VK+ +++ ++ + +FE + ++++ ++ ++ +++++ + LDY H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT------LTDYDIRYYIYELLKALDYCH 142
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
QG HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G + A ++ + P F G D DQ+ KI VLG+ ++ + + R +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD-- 260
Query: 237 YQFPQLSG-VNLSALMP-----------SASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
PQL V + P S +AI+ ++ L +D +R TA EA+ HP+
Sbjct: 261 ---PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
Query: 285 FKRC 288
F++
Sbjct: 318 FQQV 321
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 155/304 (50%), Gaps = 30/304 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + +K+G G + V++ +N ++ E IK LK ++ ++ ++ L PNI
Sbjct: 31 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--CGGPNI 88
Query: 62 VKVKELIVEKGNVF--FVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
VK+ +++ ++ + +FE + ++++ ++ ++ +++++ + LDY H
Sbjct: 89 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT------LTDYDIRYYIYELLKALDYCH 142
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
QG HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L
Sbjct: 143 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 202
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G + A ++ + P F G D DQ+ KI VLG+ ++ + + R +
Sbjct: 203 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD-- 260
Query: 237 YQFPQLSG-VNLSALMP-----------SASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
PQL V + P S +AI+ ++ L +D +R TA EA+ HP+
Sbjct: 261 ---PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 317
Query: 285 FKRC 288
F++
Sbjct: 318 FQQV 321
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 155/304 (50%), Gaps = 30/304 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + +K+G G + V++ +N ++ E IK LK ++ ++ ++ L PNI
Sbjct: 33 DDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNL--CGGPNI 90
Query: 62 VKVKELIVEKGNVF--FVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
VK+ +++ ++ + +FE + ++++ ++ ++ +++++ + LDY H
Sbjct: 91 VKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT------LTDYDIRYYIYELLKALDYCH 144
Query: 120 QQGYFHRDLKPENLLVSQG--TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
QG HRD+KP N+++ +++ D+GLA Y RV +R+++ PE+L
Sbjct: 145 SQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQD 204
Query: 178 YSSKVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y +DMW++G + A ++ + P F G D DQ+ KI VLG+ ++ + + R +
Sbjct: 205 YDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELD-- 262
Query: 237 YQFPQLSG-VNLSALMP-----------SASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
PQL V + P S +AI+ ++ L +D +R TA EA+ HP+
Sbjct: 263 ---PQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAMTHPY 319
Query: 285 FKRC 288
F++
Sbjct: 320 FQQV 323
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 117 bits (294), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/291 (31%), Positives = 144/291 (49%), Gaps = 39/291 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL--KKSYSREKCLNLREVKCLRKLNHP 59
++Y L + +G G+F V + V +G A K + KK +R+ RE + R L H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 60 NIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
NIV++ + I E+G + VF+ + L++ + A+ + +SE+ + Q+ + +
Sbjct: 64 NIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR----EYYSEADASHCIQQILEAVLHC 119
Query: 119 HQQGYFHRDLKPENLLVSQ----GTIKIADFGLAREIDAF-PPYTERVGTRWYQAPEILF 173
HQ G HRDLKPENLL++ +K+ADFGLA E+ + GT Y +PE+L
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR 179
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
K Y VD+WA G I+ LL+ P F D+ ++Y+ Q
Sbjct: 180 KEA-YGKPVDIWACGVILYILLVGYPPFWDEDQ-HKLYQ------------------QIK 219
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
A Y FP S + + +A NLI + + +P KR TA EAL+HP+
Sbjct: 220 AGAYDFP-------SPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 38/292 (13%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR---EVKCLRKLN 57
+E + + LG GSF V++A + H+G VAIK + K + + R EVK +L
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HP+I+++ + V+ V E C+ ++ K + + FSE+ + ++ Q+ G+ Y
Sbjct: 70 HPSILELYNYFEDSNYVYLVLE--MCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLY 127
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKS 175
+H G HRDL NLL+++ IKIADFGLA ++ + GT Y +PEI +S
Sbjct: 128 LHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
+ + D+W++G + LL+ RP F D+ + L + +
Sbjct: 188 A-HGLESDVWSLGCMFYTLLIGRPPFD-------------------TDTVKNTLNKVVLA 227
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
+Y+ P + +A +LI L +P R + + L HPF R
Sbjct: 228 DYEMPSFLSI-----------EAKDLIHQLLRRNPADRLSLSSVLDHPFMSR 268
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 141/280 (50%), Gaps = 20/280 (7%)
Query: 4 YSLTKKLGSGSFGCVW---QAVNKHSGEVVAIKALKKSY--SREKCLNLREVKCLRKLNH 58
+ L K LG GSFG V+ + SG + A+K LKK+ R++ E L +NH
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
P +VK+ +G ++ + + ++ +L+ + K+ +F+E VK +L ++ GLD+
Sbjct: 90 PFVVKLHYAFQTEGKLYLILDFLRGGDLF----TRLSKEVMFTEEDVKFYLAELALGLDH 145
Query: 118 MHQQGYFHRDLKPENLLVS-QGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILFKS 175
+H G +RDLKPEN+L+ +G IK+ DFGL++E ID GT Y APE++ +
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQ 205
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSV-LGSPT-MDSWADGLRQAM 233
G +S D W+ G +M E+L FQG D + M I LG P + + A L +A+
Sbjct: 206 G-HSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRAL 264
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR 273
F + L + A E ++ S W+ R
Sbjct: 265 -----FKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYR 299
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 128
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 189 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 228
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 229 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 128
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 188
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 189 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 228
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 229 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y ++LGSG F V + K +G A K +KK ++ + REV L+++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPN++ + E+ K +V + E + +L + +K+ L E A + +L Q+ G+ Y
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGG--ELFDFLAEKESLTEEEATE-FLKQILNGVYY 129
Query: 118 MHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H H DLKPEN++ V + IKI DFGLA +ID + GT + APEI+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIV 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 190 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANV 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY+F N SAL A + I L DP KR T ++LQHP+ K
Sbjct: 230 SAVNYEFEDEYFSNTSAL-------AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 132/287 (45%), Gaps = 35/287 (12%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL-KKSYSREKCLNLREVKCLRKLNHPNIV 62
Y LG+G+F V A +K + ++VAIK + KK+ ++ E+ L K+ HPNIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ ++ G+++ + + + +L + +K ++E +FQV + Y+H G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGG--ELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLG 136
Query: 123 YFHRDLKPENLLV----SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLKPENLL I I+DFGL++ D + GT Y APE+L + Y
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-Y 195
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
S VD W++G I LL P F DE D A Q + Y+
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF--YDEND-----------------AKLFEQILKAEYE 236
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
F S S+ A + I L DP KR T +ALQHP+
Sbjct: 237 FD-------SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 140/298 (46%), Gaps = 45/298 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK--------SYSREKCLNLREVKCL 53
+ Y + ++LGSG F V + K +G+ A K +KK SRE+ REV L
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE--REVNIL 62
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
R++ HPNI+ + ++ K +V + E + +L + +K+ L + A + +L Q+
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGG--ELFDFLAEKESLTEDEATQ-FLKQILD 119
Query: 114 GLDYMHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
G+ Y+H + H DLKPEN++ V IK+ DFG+A +I+A + GT + A
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 179
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PEI+ L + DMW++G I LL F G + + + I
Sbjct: 180 PEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNIS-------------- 224
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY F + + SE A + I L DP +R T A++L+H + K
Sbjct: 225 -----AVNYDFDE-------EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHPNIV 62
Y LG+G+F V A +K + ++VAIK + K K ++ E+ L K+ HPNIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ ++ G+++ + + + +L + +K ++E +FQV + Y+H G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGG--ELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLG 136
Query: 123 YFHRDLKPENLLV----SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLKPENLL I I+DFGL++ D + GT Y APE+L + Y
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-Y 195
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
S VD W++G I LL P F DE D A Q + Y+
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF--YDEND-----------------AKLFEQILKAEYE 236
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
F S S+ A + I L DP KR T +ALQHP+
Sbjct: 237 FD-------SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHPNIV 62
Y LG+G+F V A +K + ++VAIK + K K ++ E+ L K+ HPNIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ ++ G+++ + + + +L + +K ++E +FQV + Y+H G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGG--ELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLG 136
Query: 123 YFHRDLKPENLLV----SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLKPENLL I I+DFGL++ D + GT Y APE+L + Y
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-Y 195
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
S VD W++G I LL P F DE D A Q + Y+
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF--YDEND-----------------AKLFEQILKAEYE 236
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
F S S+ A + I L DP KR T +ALQHP+
Sbjct: 237 FD-------SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHPNIV 62
Y LG+G+F V A +K + ++VAIK + K K ++ E+ L K+ HPNIV
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ ++ G+++ + + + +L + +K ++E +FQV + Y+H G
Sbjct: 80 ALDDIYESGGHLYLIMQLVSGG--ELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLG 136
Query: 123 YFHRDLKPENLLV----SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLKPENLL I I+DFGL++ D + GT Y APE+L + Y
Sbjct: 137 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP-Y 195
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
S VD W++G I LL P F DE D A Q + Y+
Sbjct: 196 SKAVDCWSIGVIAYILLCGYPPF--YDEND-----------------AKLFEQILKAEYE 236
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
F S S+ A + I L DP KR T +ALQHP+
Sbjct: 237 FD-------SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK-----SYSREK--CLNLR-EVKCL 53
++Y ++K LGSG+ G V A + + + VAIK + K +RE LN+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
+KLNHP I+K+K + + + V E M+ L+ + K+ E+ K + +Q+
Sbjct: 70 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQML 124
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H+ G HRDLKPEN+L+S IKI DFG ++ + GT Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 169 PEILFKSGL--YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWA 226
PE+L G Y+ VD W++G I+ L P F T S
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS---------------EHRTQVSLK 229
Query: 227 DGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
D Q + Y F + + SE A++L++ L DP R T EAL+HP+ +
Sbjct: 230 D---QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK-----SYSREK--CLNLR-EVKCL 53
++Y ++K LGSG+ G V A + + + VAIK + K +RE LN+ E++ L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
+KLNHP I+K+K + + + V E M+ L+ + K+ E+ K + +Q+
Sbjct: 69 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQML 123
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H+ G HRDLKPEN+L+S IKI DFG ++ + GT Y A
Sbjct: 124 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 183
Query: 169 PEILFKSGL--YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWA 226
PE+L G Y+ VD W++G I+ L P F T S
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS---------------EHRTQVSLK 228
Query: 227 DGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
D Q + Y F + + SE A++L++ L DP R T EAL+HP+ +
Sbjct: 229 D---QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK-----SYSREK--CLNLR-EVKCL 53
++Y ++K LGSG+ G V A + + + VAIK + K +RE LN+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
+KLNHP I+K+K + + + V E M+ L+ + K+ E+ K + +Q+
Sbjct: 70 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQML 124
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H+ G HRDLKPEN+L+S IKI DFG ++ + GT Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 169 PEILFKSGL--YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWA 226
PE+L G Y+ VD W++G I+ L P F T S
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS---------------EHRTQVSLK 229
Query: 227 DGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
D Q + Y F + + SE A++L++ L DP R T EAL+HP+ +
Sbjct: 230 D---QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK-----SYSREK--CLNLR-EVKCL 53
++Y ++K LGSG+ G V A + + + VAIK + K +RE LN+ E++ L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
+KLNHP I+K+K + + + V E M+ L+ + K+ E+ K + +Q+
Sbjct: 70 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQML 124
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H+ G HRDLKPEN+L+S IKI DFG ++ + GT Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 169 PEILFKSGL--YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWA 226
PE+L G Y+ VD W++G I+ L P F T S
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS---------------EHRTQVSLK 229
Query: 227 DGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
D Q + Y F + + SE A++L++ L DP R T EAL+HP+ +
Sbjct: 230 D---QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 45/300 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK-----SYSREK--CLNLR-EVKCL 53
++Y ++K LGSG+ G V A + + + VAIK + K +RE LN+ E++ L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
+KLNHP I+K+K + + + V E M+ L+ + K+ E+ K + +Q+
Sbjct: 76 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNKR----LKEATCKLYFYQML 130
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H+ G HRDLKPEN+L+S IKI DFG ++ + GT Y A
Sbjct: 131 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 190
Query: 169 PEILFKSGL--YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWA 226
PE+L G Y+ VD W++G I+ L P F T S
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS---------------EHRTQVSLK 235
Query: 227 DGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
D Q + Y F + + SE A++L++ L DP R T EAL+HP+ +
Sbjct: 236 D---QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 285
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 125/228 (54%), Gaps = 16/228 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSG----EVVAIKALKKSY--SREKCLNLREVKCLRKL 56
++ L K LG GSFG V+ V K SG ++ A+K LKK+ R++ E L ++
Sbjct: 26 QFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 57 NHPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
NHP IVK+ +G ++ + + ++ +L+ + K+ +F+E VK +L ++ L
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLF----TRLSKEVMFTEEDVKFYLAELALAL 140
Query: 116 DYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
D++H G +RDLKPEN+L+ +G IK+ DFGL++E ID GT Y APE++
Sbjct: 141 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 200
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSV-LGSP 220
+ G ++ D W+ G +M E+L FQG D + M I LG P
Sbjct: 201 RRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 247
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 136/287 (47%), Gaps = 39/287 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+ + +LG G+ V++ K + + A+K LKK+ +K + E+ L +L+HPNI+K
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIK 112
Query: 64 VKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+KE+ + V E + L+ + K + + AVK Q+ + Y+H+ G
Sbjct: 113 LKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK----QILEAVAYLHENG 168
Query: 123 YFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLKPENLL + +KIADFGL++ ++ GT Y APEIL + Y
Sbjct: 169 IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEIL-RGCAY 227
Query: 179 SSKVDMWAMGAIMAELLL-FRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
+VDMW++G I LL F P + + DQ R+ + Y
Sbjct: 228 GPEVDMWSVGIITYILLCGFEPFYD--ERGDQFM-----------------FRRILNCEY 268
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
F +S S +A +L+ L DP KR T +ALQHP+
Sbjct: 269 YF-------ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 125/228 (54%), Gaps = 16/228 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSG----EVVAIKALKKSY--SREKCLNLREVKCLRKL 56
++ L K LG GSFG V+ V K SG ++ A+K LKK+ R++ E L ++
Sbjct: 25 QFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 57 NHPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
NHP IVK+ +G ++ + + ++ +L+ + K+ +F+E VK +L ++ L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLF----TRLSKEVMFTEEDVKFYLAELALAL 139
Query: 116 DYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
D++H G +RDLKPEN+L+ +G IK+ DFGL++E ID GT Y APE++
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSV-LGSP 220
+ G ++ D W+ G +M E+L FQG D + M I LG P
Sbjct: 200 RRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 125/228 (54%), Gaps = 16/228 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSG----EVVAIKALKKSY--SREKCLNLREVKCLRKL 56
++ L K LG GSFG V+ V K SG ++ A+K LKK+ R++ E L ++
Sbjct: 25 QFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 57 NHPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
NHP IVK+ +G ++ + + ++ +L+ + K+ +F+E VK +L ++ L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLF----TRLSKEVMFTEEDVKFYLAELALAL 139
Query: 116 DYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
D++H G +RDLKPEN+L+ +G IK+ DFGL++E ID GT Y APE++
Sbjct: 140 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVN 199
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSV-LGSP 220
+ G ++ D W+ G +M E+L FQG D + M I LG P
Sbjct: 200 RRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP 246
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 137/292 (46%), Gaps = 47/292 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K+S ++A+K L K+ + + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 122
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 123 YCHSKKVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLPPEMI 178
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ D ++
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQDTYKRI 218
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 219 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 140/305 (45%), Gaps = 52/305 (17%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS------YS---------REKCLN 46
E Y +KLGSG++G V K+ AIK +KKS YS E+ N
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 47 LREVKCLRKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKA 106
E+ L+ L+HPNI+K+ ++ +K + V E + +L E + + F E
Sbjct: 96 --EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGG--ELFEQIINRHK-FDECDAAN 150
Query: 107 WLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG----TIKIADFGLAREIDAFPPYTERVG 162
+ Q+ G+ Y+H+ HRD+KPEN+L+ IKI DFGL+ +R+G
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLG 210
Query: 163 TRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTM 222
T +Y APE+L K Y+ K D+W+ G IM LL P F G ++ D + K+
Sbjct: 211 TAYYIAPEVLKKK--YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDF 268
Query: 223 DSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQH 282
+ W + S++A LI+ + ++D KR TA EAL
Sbjct: 269 NDW--------------------------KNISDEAKELIKLMLTYDYNKRCTAEEALNS 302
Query: 283 PFFKR 287
+ K+
Sbjct: 303 RWIKK 307
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 140/295 (47%), Gaps = 37/295 (12%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+L +G GS+G V AV K + A K + K + + +E++ ++ L+HPNI++
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 64 VKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ E + +++ V E C L++ + K+ +F ES + V + Y H+
Sbjct: 71 LYETFEDNTDIYLVMELCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKLN 126
Query: 123 YFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLKPEN L + +K+ DFGLA +VGT +Y +P++L GLY
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLY 184
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
+ D W+ G +M LL P F + + M KI R+ +
Sbjct: 185 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI----------------REG---TFT 225
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPP 293
FP+ +N+S P A +LI L + P +R T+ +AL+H +F++ L P
Sbjct: 226 FPEKDWLNVS---PQAE----SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 273
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 140/295 (47%), Gaps = 37/295 (12%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y+L +G GS+G V AV K + A K + K + + +E++ ++ L+HPNI++
Sbjct: 28 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 87
Query: 64 VKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ E + +++ V E C L++ + K+ +F ES + V + Y H+
Sbjct: 88 LYETFEDNTDIYLVMELCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKLN 143
Query: 123 YFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLKPEN L + +K+ DFGLA +VGT +Y +P++L GLY
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL--EGLY 201
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
+ D W+ G +M LL P F + + M KI R+ +
Sbjct: 202 GPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKI----------------REG---TFT 242
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPP 293
FP+ +N+S P A +LI L + P +R T+ +AL+H +F++ L P
Sbjct: 243 FPEKDWLNVS---PQAE----SLIRRLLTKSPKQRITSLQALEHEWFEKQLSSSP 290
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 139/298 (46%), Gaps = 45/298 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK--------SYSREKCLNLREVKCL 53
+ Y + ++LGSG F V + K +G+ A K +KK SRE+ REV L
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIE--REVNIL 83
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
R++ HPNI+ + ++ K +V + E + +L + +K+ L + A + +L Q+
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGG--ELFDFLAEKESLTEDEATQ-FLKQILD 140
Query: 114 GLDYMHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
G+ Y+H + H DLKPEN++ V IK+ DFG+A +I+A + GT + A
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 200
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PEI+ L + DMW++G I LL F G + + + I
Sbjct: 201 PEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNIS-------------- 245
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY F + + SE A + I L DP +R A++L+H + K
Sbjct: 246 -----AVNYDFDE-------EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 139/298 (46%), Gaps = 45/298 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK--------SYSREKCLNLREVKCL 53
+ Y + ++LGSG F V + K +G+ A K +KK SRE+ REV L
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE--REVNIL 69
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
R++ HPNI+ + ++ K +V + E + +L + +K+ L + A + +L Q+
Sbjct: 70 REIRHPNIITLHDIFENKTDVVLILELVSGG--ELFDFLAEKESLTEDEATQ-FLKQILD 126
Query: 114 GLDYMHQQGYFHRDLKPENLL-----VSQGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
G+ Y+H + H DLKPEN++ V IK+ DFG+A +I+A + GT + A
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 186
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PEI+ L + DMW++G I LL F G + + + I
Sbjct: 187 PEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGETKQETLTNIS-------------- 231
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
A+NY F + + SE A + I L DP +R A++L+H + K
Sbjct: 232 -----AVNYDFDE-------EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 41/290 (14%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 122
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
Y H + HRD+KPENLL+ S G +KIADFG + + TE GT Y PE++ +
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-SRRTELCGTLDYLPPEMI-EG 180
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
++ KVD+W++G + E L+ +P F+ +++ + ++ +
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRISRV 221
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ FP +E A +LI L +P +RP E L+HP+
Sbjct: 222 EFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 58 HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E + +Y+ + QK F E ++ ++ L
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELANALS 127
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI 183
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 184 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 223
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 224 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 143/311 (45%), Gaps = 47/311 (15%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 122
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMI 178
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 218
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVP 292
+ + FP +E A +LI L +P +RP E L+HP+ P
Sbjct: 219 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKP 267
Query: 293 PHLRSTPAVAA 303
+ ++ + AA
Sbjct: 268 SNCQNKESAAA 278
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 43/299 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK-----SYSREK--CLNLR-EVKCL 53
++Y ++K LGSG+ G V A + + + VAI+ + K +RE LN+ E++ L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+KLNHP I+K+K + + + V E M+ +L + ++L E+ K + +Q+
Sbjct: 209 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGG--ELFDKVVGNKRL-KEATCKLYFYQMLL 264
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQAP 169
+ Y+H+ G HRDLKPEN+L+S IKI DFG ++ + GT Y AP
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
Query: 170 EILFKSGL--YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWAD 227
E+L G Y+ VD W++G I+ L P F T S D
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS---------------EHRTQVSLKD 369
Query: 228 GLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
Q + Y F + + SE A++L++ L DP R T EAL+HP+ +
Sbjct: 370 ---QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 418
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 148
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI 204
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 205 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 244
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 245 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 58 HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E + +Y+ + QK F E ++ ++ L
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELANALS 127
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLXGTLDYLPPEMI 183
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 184 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 223
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 224 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 11 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 70
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 126
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI 182
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 183 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 222
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 223 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/299 (30%), Positives = 143/299 (47%), Gaps = 43/299 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK-----SYSREK--CLNLR-EVKCL 53
++Y ++K LGSG+ G V A + + + VAI+ + K +RE LN+ E++ L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+KLNHP I+K+K + + + V E M+ +L + ++L E+ K + +Q+
Sbjct: 195 KKLNHPCIIKIKNFF-DAEDYYIVLELMEGG--ELFDKVVGNKRL-KEATCKLYFYQMLL 250
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVGTRWYQAP 169
+ Y+H+ G HRDLKPEN+L+S IKI DFG ++ + GT Y AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 170 EILFKSGL--YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWAD 227
E+L G Y+ VD W++G I+ L P F T S D
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS---------------EHRTQVSLKD 355
Query: 228 GLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
Q + Y F + + SE A++L++ L DP R T EAL+HP+ +
Sbjct: 356 ---QITSGKYNF-------IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQ 404
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 127
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMI 183
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 184 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 223
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 224 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 47/292 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 125
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI 181
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 221
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 222 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 127
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI 183
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 184 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 223
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 224 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 83
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 139
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 140 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI 195
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 196 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 235
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 236 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 125
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI 181
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 221
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 222 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 47/292 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 6 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 65
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 121
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 122 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI 177
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 178 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 217
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 218 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 122
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI 178
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 218
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 219 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 123
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMI 179
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 180 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 219
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 220 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 122
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTDLCGTLDYLPPEMI 178
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 218
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 219 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 47/292 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 122
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTXLCGTLDYLPPEMI 178
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 218
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 219 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 123
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----CHAPSSRRTTLSGTLDYLPPEMI 179
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 180 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 219
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 220 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 92
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 148
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRDDLCGTLDYLPPEMI 204
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 205 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 244
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 245 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 43/315 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
Y + ++LGSG+FG V + V K +G V K + Y +K E+ + +L+HP ++
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 64 VKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ + +K + + E + L+ + A+ K SE+ V ++ Q GL +MH+
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK---MSEAEVINYMRQACEGLKHMHEHS 169
Query: 123 YFHRDLKPENLLVSQ---GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS--GL 177
H D+KPEN++ ++KI DFGLA +++ T + APEI+ + G
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGF 229
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
Y+ DMWA+G + LL F G D+ + L+ ++
Sbjct: 230 YT---DMWAIGVLGYVLLSGLSPFAGEDDLET-------------------LQNVKRCDW 267
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLRS 297
+F + + S S +A + I++L +P KR T +AL+HP+ K H
Sbjct: 268 EFDEDA-------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG-----DHSNL 315
Query: 298 TPAVAATRRGMLKQQ 312
T + ++R ++Q+
Sbjct: 316 TSRIPSSRYNKIRQK 330
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 125
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLPPEMI 181
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 221
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 222 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 47/292 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 122
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRAALCGTLDYLPPEMI 178
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 218
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 219 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 125
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRDDLCGTLDYLPPEMI 181
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 221
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 222 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 124
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDYLPPEMI 180
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 181 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 220
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 221 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 158/332 (47%), Gaps = 58/332 (17%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + + +G GS+ + ++K + A+K + KS R+ + + LR HPNI
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS-KRDPTEEIEIL--LRYGQHPNI 78
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
+ +K++ + V+ V E M+ +L++ K +Q+ FSE A LF + + ++Y+H Q
Sbjct: 79 ITLKDVYDDGKYVYVVTELMKGG--ELLD-KILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 122 GYFHRDLKPENLLV-----SQGTIKIADFGLAREIDA------FPPYTERVGTRWYQAPE 170
G HRDLKP N+L + +I+I DFG A+++ A P YT + APE
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN-----FVAPE 190
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLL-FRPLFQGTDEADQMYKICSVLGSPTMDSWADGL 229
+L + G Y + D+W++G ++ +L + P G D+ + +I + +GS
Sbjct: 191 VLERQG-YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPE--EILARIGSGKF------- 240
Query: 230 RQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
LSG S S+ A +L+ + DP +R TAA L+HP+
Sbjct: 241 -----------SLSG----GYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWD 285
Query: 290 YVP---------PHLRSTPAVAATRRGMLKQQ 312
+P PHL A+AAT + + Q
Sbjct: 286 QLPQYQLNRQDAPHLVKG-AMAATYSALNRNQ 316
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 67
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 123
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 124 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRDTLCGTLDYLPPEMI 179
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 180 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 219
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 220 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 47/292 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 66
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 122
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDYLPPEMI 178
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 179 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 218
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 219 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 136/292 (46%), Gaps = 47/292 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 125
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRXXLCGTLDYLPPEMI 181
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 221
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 222 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 44/292 (15%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS--YSREKCLNL-REVKCLRKLNHPN 60
+S +++G GSFG V+ A + + EVVAIK + S S EK ++ +EV+ L+KL HPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
++ + + + + V E + L+E K+ Q E + A +GL Y+H
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ---EVEIAAVTHGALQGLAYLHS 172
Query: 121 QGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF--KSGL 177
HRD+K N+L+S+ G +K+ DFG A P VGT ++ APE++ G
Sbjct: 173 HNMIHRDVKAGNILLSEPGLVKLGDFGSA---SIMAPANXFVGTPYWMAPEVILAMDEGQ 229
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS--WADGLRQAMAI 235
Y KVD+W++G EL +P + +Y I SP + S W++ R
Sbjct: 230 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPALQSGHWSEYFR----- 283
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
N ++S P RPT+ L+H F R
Sbjct: 284 ------------------------NFVDSCLQKIPQDRPTSEVLLKHRFVLR 311
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 133/292 (45%), Gaps = 44/292 (15%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS--YSREKCLNL-REVKCLRKLNHPN 60
+S +++G GSFG V+ A + + EVVAIK + S S EK ++ +EV+ L+KL HPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
++ + + + + V E + L+E K+ Q E + A +GL Y+H
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQ---EVEIAAVTHGALQGLAYLHS 133
Query: 121 QGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF--KSGL 177
HRD+K N+L+S+ G +K+ DFG A P VGT ++ APE++ G
Sbjct: 134 HNMIHRDVKAGNILLSEPGLVKLGDFGSA---SIMAPANXFVGTPYWMAPEVILAMDEGQ 190
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS--WADGLRQAMAI 235
Y KVD+W++G EL +P + +Y I SP + S W++ R
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPALQSGHWSEYFR----- 244
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
N ++S P RPT+ L+H F R
Sbjct: 245 ------------------------NFVDSCLQKIPQDRPTSEVLLKHRFVLR 272
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y + ++LGSG F V + K +G A K +KK SR + REV LR++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
HPNI+ + ++ + +V + E + +L + QK+ L SE +++ Q+ G++Y
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESL-SEEEATSFIKQILDGVNY 130
Query: 118 MHQQGYFHRDLKPENLLVSQGT-----IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H + H DLKPEN+++ IK+ DFGLA EI+ + GT + APEI+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANI 230
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
A++Y F + SE A + I L + KR T EAL+HP
Sbjct: 231 TAVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 47/294 (15%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A + S ++A+K L K+ + + REV+ L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALS 126
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI 182
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ P F+ ++ + R+
Sbjct: 183 -EGRMHDEKVDLWSLGVLCYEFLVGMPPFEA-------------------HTYQETYRRI 222
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
+ + FP +E A +LI L + +R T AE L+HP+ K
Sbjct: 223 SRVEFTFPDF-----------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 9 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 68
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 124
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIA+FG + P + R GT Y PE++
Sbjct: 125 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPPEMI 180
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 181 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 220
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 221 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 69
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 125
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIA+FG + P + R GT Y PE++
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIANFGWS----VHAPSSRRTTLCGTLDYLPPEMI 181
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 182 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 221
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 222 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 135/292 (46%), Gaps = 47/292 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K ++A+K L K+ + + REV+ L
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 63
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 119
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 120 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEMI 175
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 176 -EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 215
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 216 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 134/293 (45%), Gaps = 47/293 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A K S ++A+K L K+ + + REV+ L
Sbjct: 12 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 71
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANALS 127
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV---GTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE +
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWS----VHAPSSRRTTLCGTLDYLPPEXI 183
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ + KVD+W++G + E L+ +P F+ +++ + ++
Sbjct: 184 -EGRXHDEKVDLWSLGVLCYEFLVGKPPFEA-------------------NTYQETYKRI 223
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ + FP +E A +LI L +P +RP E L+HP+
Sbjct: 224 SRVEFTFPDF-----------VTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 47/294 (15%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
+E + + + LG G FG V+ A + S ++A+K L K+ + + REV+ L
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR 70
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ + V+ + E +Y+ + QK F E ++ ++ L
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALS 126
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEIL 172
Y H + HRD+KPENLL+ S G +KIADFG + P + R GT Y PE++
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWS----VHAPSSRRDTLCGTLDYLPPEMI 182
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ ++ KVD+W++G + E L+ P F+ ++ + R+
Sbjct: 183 -EGRMHDEKVDLWSLGVLCYEFLVGMPPFEA-------------------HTYQETYRRI 222
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
+ + FP +E A +LI L + +R T AE L+HP+ K
Sbjct: 223 SRVEFTFPDF-----------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 131/251 (52%), Gaps = 20/251 (7%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKA-----LKKSYSREKCLNLREVKCLRK 55
+ + + KK+G G F V++A G VA+K L + +R C+ +E+ L++
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI--KEIDLLKQ 88
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
LNHPN++K +E + V E +L ++++ K++++L E V + Q+
Sbjct: 89 LNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148
Query: 115 LDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTER-VGTRWYQAPEIL 172
L++MH + HRD+KP N+ ++ G +K+ D GL R + VGT +Y +PE +
Sbjct: 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERI 208
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGS---PTM--DSWAD 227
++G Y+ K D+W++G ++ E+ + F G + +Y +C + P + D +++
Sbjct: 209 HENG-YNFKSDIWSLGCLLYEMAALQSPFYG--DKMNLYSLCKKIEQCDYPPLPSDHYSE 265
Query: 228 GLRQ--AMAIN 236
LRQ M IN
Sbjct: 266 ELRQLVNMCIN 276
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 36/290 (12%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
++ Y + ++LG+G+FG V + + +G A K + + +K +E++ + L HP
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 215
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
+V + + + + ++E M +L E + SE ++ QV +GL +MH+
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFMSGG--ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 273
Query: 121 QGYFHRDLKPENLLVS---QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS-- 175
Y H DLKPEN++ + +K+ DFGL +D GT + APE+
Sbjct: 274 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 333
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
G Y+ DMW++G + LL F G ++ + + + S W
Sbjct: 334 GYYT---DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC-------DW---------- 373
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
N SG+ SED + I L DP R T +AL+HP+
Sbjct: 374 NMDDSAFSGI---------SEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 36/290 (12%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
++ Y + ++LG+G+FG V + + +G A K + + +K +E++ + L HP
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPT 109
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
+V + + + + ++E M +L E + SE ++ QV +GL +MH+
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFMSGG--ELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE 167
Query: 121 QGYFHRDLKPENLLVS---QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS-- 175
Y H DLKPEN++ + +K+ DFGL +D GT + APE+
Sbjct: 168 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPV 227
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
G Y+ DMW++G + LL F G ++ + + + S W
Sbjct: 228 GYYT---DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSC-------DW---------- 267
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
N SG+ SED + I L DP R T +AL+HP+
Sbjct: 268 NMDDSAFSGI---------SEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 144/304 (47%), Gaps = 38/304 (12%)
Query: 4 YSLTKKL-GSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKL-NHPNI 61
Y LT +L G G++ V AV+ +G+ A+K ++K + REV+ L + + NI
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNI 73
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
+++ E + + VFE +Q + A QKQ+ F+E + V LD++H +
Sbjct: 74 LELIEFFEDDTRFYLVFEKLQGGS---ILAHIQKQKHFNEREASRVVRDVAAALDFLHTK 130
Query: 122 GYFHRDLKPENLLVSQ----GTIKIADFGLAREID--------AFPPYTERVGTRWYQAP 169
G HRDLKPEN+L +KI DF L + P T G+ Y AP
Sbjct: 131 GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAP 190
Query: 170 EIL----FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY---KICSVLGSPTM 222
E++ ++ Y + D+W++G ++ +L P F G AD + ++C V +
Sbjct: 191 EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF 250
Query: 223 DSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQH 282
+S +G Y+FP ++S+ +A +LI L D +R +AA+ LQH
Sbjct: 251 ESIQEG-------KYEFPDKDWAHISS-------EAKDLISKLLVRDAKQRLSAAQVLQH 296
Query: 283 PFFK 286
P+ +
Sbjct: 297 PWVQ 300
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 120/223 (53%), Gaps = 17/223 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQA---VNKHSGEVVAIKALKKSY----SREKCLNLREVKCLR 54
E + L + LG G +G V+Q ++G++ A+K LKK+ +++ E L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 55 KLNHPNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
++ HP IV + G ++ + E + L+ +E ++ +F E +L ++
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISM 132
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREI--DAFPPYTERVGTRWYQAPE 170
L ++HQ+G +RDLKPEN++++ QG +K+ DFGL +E D +T GT Y APE
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-FCGTIEYMAPE 191
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKI 213
IL +SG ++ VD W++GA+M ++L P F G + + KI
Sbjct: 192 ILMRSG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 118/222 (53%), Gaps = 15/222 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQA---VNKHSGEVVAIKALKKSY----SREKCLNLREVKCLR 54
E + L + LG G +G V+Q ++G++ A+K LKK+ +++ E L
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILE 76
Query: 55 KLNHPNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
++ HP IV + G ++ + E + L+ +E ++ +F E +L ++
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISM 132
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERV-GTRWYQAPEI 171
L ++HQ+G +RDLKPEN++++ QG +K+ DFGL +E T GT Y APEI
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEI 192
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKI 213
L +SG ++ VD W++GA+M ++L P F G + + KI
Sbjct: 193 LMRSG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 135/275 (49%), Gaps = 38/275 (13%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKL-NHPNIVKVKE 66
K LG GSF + V+K S + A+K + K R + +E+ L+ HPNIVK+ E
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVKLHE 73
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHR 126
+ ++ + F V E + N +L E K+K+ FSE+ + ++ + +MH G HR
Sbjct: 74 VFHDQLHTFLVMELL--NGGELFERIKKKKH-FSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 127 DLKPENLLVSQGT----IKIADFGLAREIDAFPPYTERVG----TRWYQAPEILFKSGLY 178
DLKPENLL + IKI DFG AR PP + + T Y APE+L ++G Y
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFAR---LKPPDNQPLKTPCFTLHYAAPELLNQNG-Y 186
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
D+W++G I+ +L + FQ D S T S + +++ ++
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDR------------SLTCTSAVEIMKKIKKGDFS 234
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR 273
F + N+ S++A +LI+ L + DP KR
Sbjct: 235 FEGEAWKNV-------SQEAKDLIQGLLTVDPNKR 262
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 41/291 (14%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y + ++LGSG F V + K +G A K +KK SR + REV LR++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
H N++ + ++ + +V + E + +L + QK+ L SE +++ Q+ G++Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESL-SEEEATSFIKQILDGVNY 130
Query: 118 MHQQGYFHRDLKPENLLVSQGT-----IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H + H DLKPEN+++ IK+ DFGLA EI+ + GT + APEI+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANI 230
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
A++Y F + SE A + I L + KR T EAL+HP
Sbjct: 231 TAVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 146/323 (45%), Gaps = 72/323 (22%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKAL-KKSYSREK---------------- 43
+ +Y+L ++G GS+G V A N++ A+K L KK R+
Sbjct: 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPG 71
Query: 44 -CLNLR--------EVKCLRKLNHPNIVKVKELIVE--KGNVFFVFECMQCNLYQLMEAK 92
C+ R E+ L+KL+HPN+VK+ E++ + + +++ VFE + N +ME
Sbjct: 72 GCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELV--NQGPVMEVP 129
Query: 93 KQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREI 151
K SE + + + +G++Y+H Q HRD+KP NLLV + G IKIADFG++ E
Sbjct: 130 TLKP--LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF 187
Query: 152 ---DAFPPYTERVGTRWYQAPEILFKS-GLYSSK-VDMWAMGAIMAELLLFRPLFQGTDE 206
DA + VGT + APE L ++ ++S K +D+WAMG +
Sbjct: 188 KGSDAL--LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL--------------- 230
Query: 207 ADQMYKICSVLGS-PTMDSWADGLRQAMAIN-YQFPQLSGVNLSALMPSASEDAINLIES 264
C V G P MD L + +FP P +ED +LI
Sbjct: 231 ------YCFVFGQCPFMDERIMCLHSKIKSQALEFPD---------QPDIAEDLKDLITR 275
Query: 265 LCSWDPCKRPTAAEALQHPFFKR 287
+ +P R E HP+ R
Sbjct: 276 MLDKNPESRIVVPEIKLHPWVTR 298
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 154/332 (46%), Gaps = 58/332 (17%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + + +G GS+ + ++K + A+K + KS R+ + + LR HPNI
Sbjct: 22 DGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKS-KRDPTEEIEIL--LRYGQHPNI 78
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
+ +K++ + V+ V E + +L++ K +Q+ FSE A LF + + ++Y+H Q
Sbjct: 79 ITLKDVYDDGKYVYVVTELXKGG--ELLD-KILRQKFFSEREASAVLFTITKTVEYLHAQ 135
Query: 122 GYFHRDLKPENLLV-----SQGTIKIADFGLAREIDA------FPPYTERVGTRWYQAPE 170
G HRDLKP N+L + +I+I DFG A+++ A P YT + APE
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTAN-----FVAPE 190
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLL-FRPLFQGTDEADQMYKICSVLGSPTMDSWADGL 229
+L + G Y + D+W++G ++ L + P G D+ + +I + +GS
Sbjct: 191 VLERQG-YDAACDIWSLGVLLYTXLTGYTPFANGPDDTPE--EILARIGSGKF------- 240
Query: 230 RQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
LSG S S+ A +L+ DP +R TAA L+HP+
Sbjct: 241 -----------SLSG----GYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWIVHWD 285
Query: 290 YVP---------PHLRSTPAVAATRRGMLKQQ 312
+P PHL A AAT + + Q
Sbjct: 286 QLPQYQLNRQDAPHLVKG-AXAATYSALNRNQ 316
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 4 YSLT-KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNH-P 59
Y LT K+LG G F V Q ++K +G+ A K LKK + C L E+ L P
Sbjct: 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCP 89
Query: 60 NIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
++ + E+ + + E ++ L + ++ SE+ V + Q+ G+ Y+
Sbjct: 90 RVINLHEVYENTSEIILILEYAAGGEIFSL--CLPELAEMVSENDVIRLIKQILEGVYYL 147
Query: 119 HQQGYFHRDLKPENLLVSQ----GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
HQ H DLKP+N+L+S G IKI DFG++R+I E +GT Y APEIL
Sbjct: 148 HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNY 207
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
+ ++ DMW +G I LL F G D + I V
Sbjct: 208 DPI-TTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV-----------------N 249
Query: 235 INYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
++Y S V S+ A + I+SL +P KRPTA L H + ++
Sbjct: 250 VDYSEETFSSV---------SQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 41/291 (14%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y + ++LGSG F V + K +G A K +KK SR + REV LR++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
H N++ + ++ + +V + E + +L + QK+ L SE +++ Q+ G++Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESL-SEEEATSFIKQILDGVNY 130
Query: 118 MHQQGYFHRDLKPENLLVSQGT-----IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H + H DLKPEN+++ IK+ DFGLA EI+ + GT + APEI+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G D+ + L
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLG-------------------DTKQETLANI 230
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
A++Y F + SE A + I L + KR T EAL+HP
Sbjct: 231 TAVSYDFDE-------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 41/291 (14%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y + ++LGSG F V + K +G A K +KK SR + REV LR++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
H N++ + ++ + +V + E + +L + QK+ L SE +++ Q+ G++Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESL-SEEEATSFIKQILDGVNY 130
Query: 118 MHQQGYFHRDLKPENLLVSQGT-----IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H + H DLKPEN+++ IK+ DFGLA EI+ + GT + APEI+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G + + + I SV
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---------------- 233
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
+Y F + SE A + I L + KR T EAL+HP
Sbjct: 234 ---SYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 41/291 (14%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y + ++LGSG F V + K +G A K +KK SR + REV LR++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
H N++ + ++ + +V + E + +L + QK+ L SE +++ Q+ G++Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESL-SEEEATSFIKQILDGVNY 130
Query: 118 MHQQGYFHRDLKPENLLVSQGT-----IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H + H DLKPEN+++ IK+ DFGLA EI+ + GT + APEI+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G + + + I SV
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---------------- 233
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
+Y F + SE A + I L + KR T EAL+HP
Sbjct: 234 ---SYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 41/291 (14%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL------REVKCLRKLN 57
Y + ++LGSG F V + K +G A K +KK SR + REV LR++
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
H N++ + ++ + +V + E + +L + QK+ L SE +++ Q+ G++Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGG--ELFDFLAQKESL-SEEEATSFIKQILDGVNY 130
Query: 118 MHQQGYFHRDLKPENLLVSQGT-----IKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+H + H DLKPEN+++ IK+ DFGLA EI+ + GT + APEI+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
L + DMW++G I LL F G + + + I SV
Sbjct: 191 NYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV---------------- 233
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
+Y F + SE A + I L + KR T EAL+HP
Sbjct: 234 ---SYDFDE-------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 149/337 (44%), Gaps = 59/337 (17%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK--KSYSREKCLNLREVKCLRKLNH 58
M++Y + +G GSFG V +A ++ E VAIK +K K++ + + +R ++ + K +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 59 P---NIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQK------QQLFSESAVKAWLF 109
IV +K + + ++ VFE + NLY L+ + + F++ A LF
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 110 QVFRGLDYMHQQGYFHRDLKPENLLV---SQGTIKIADFGLAREIDAFPPYTERVGTRWY 166
L +H DLKPEN+L+ + IKI DFG + ++ + + +R+Y
Sbjct: 173 LATPELSIIHC------DLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQXIQSRFY 224
Query: 167 QAPEILFKSGL-YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSP----- 220
++PE+L G+ Y +DMW++G I+ E+ PLF G +E DQM KI VLG P
Sbjct: 225 RSPEVLL--GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 282
Query: 221 ------------------TMDSWADGLRQ-----------AMAINYQFPQLSGVNLSALM 251
+ DG R+ + + P S
Sbjct: 283 DQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHT 342
Query: 252 PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
+ +LI + +DP R ALQH FFK+
Sbjct: 343 VADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 149/337 (44%), Gaps = 59/337 (17%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK--KSYSREKCLNLREVKCLRKLNH 58
M++Y + +G GSFG V +A ++ E VAIK +K K++ + + +R ++ + K +
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 93
Query: 59 P---NIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQK------QQLFSESAVKAWLF 109
IV +K + + ++ VFE + NLY L+ + + F++ A LF
Sbjct: 94 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 153
Query: 110 QVFRGLDYMHQQGYFHRDLKPENLLV---SQGTIKIADFGLAREIDAFPPYTERVGTRWY 166
L +H DLKPEN+L+ + IKI DFG + ++ + + +R+Y
Sbjct: 154 LATPELSIIHC------DLKPENILLCNPKRSAIKIVDFGSSCQLGQ--RIYQXIQSRFY 205
Query: 167 QAPEILFKSGL-YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSP----- 220
++PE+L G+ Y +DMW++G I+ E+ PLF G +E DQM KI VLG P
Sbjct: 206 RSPEVLL--GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 263
Query: 221 ------------------TMDSWADGLRQ-----------AMAINYQFPQLSGVNLSALM 251
+ DG R+ + + P S
Sbjct: 264 DQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHT 323
Query: 252 PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
+ +LI + +DP R ALQH FFK+
Sbjct: 324 VADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 360
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKA--LKKSYSREKCLNLREVKCLRKLNHPNIVKVKE 66
K+G GS G V A KHSG VA+K L+K RE N EV +R H N+V++ +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFN--EVVIMRDYQHFNVVEMYK 109
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHR 126
+ ++ + E +Q L + Q + +E + V + L Y+H QG HR
Sbjct: 110 SYLVGEELWVLMEFLQGG--ALTDIVSQVR--LNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 127 DLKPENLLVS-QGTIKIADFGLAREIDA-FPPYTERVGTRWYQAPEILFKSGLYSSKVDM 184
D+K +++L++ G +K++DFG +I P VGT ++ APE++ +S LY+++VD+
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRS-LYATEVDI 224
Query: 185 WAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQLSG 244
W++G ++ E++ P + ++D QAM P
Sbjct: 225 WSLGIMVIEMVDGEPPY-----------------------FSDSPVQAMKRLRDSPPPKL 261
Query: 245 VNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
N + P + +E + DP +R TA E L HPF
Sbjct: 262 KNSHKVSPVLR----DFLERMLVRDPQERATAQELLDHPFL 298
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 140/311 (45%), Gaps = 47/311 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK----KSYSREKCLNLRE-----VKC 52
E Y + LG G V + ++K + + A+K + S+S E+ LRE V
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 53 LRKLN-HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQV 111
LRK++ HPNI+++K+ F VF+ M+ +L + +K L SE + + +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTL-SEKETRKIMRAL 133
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPE 170
+ +H+ HRDLKPEN+L+ IK+ DFG + ++D E GT Y APE
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 193
Query: 171 ILFKS-----GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSW 225
I+ S Y +VDMW+ G IM LL P F QM
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW---HRKQMLM------------- 237
Query: 226 ADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
LR M+ NYQF S S+ +L+ P KR TA EAL HPFF
Sbjct: 238 ---LRMIMSGNYQFG-------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
Query: 286 KRCLYVPPHLR 296
++ YV +R
Sbjct: 288 QQ--YVVEEVR 296
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 149/337 (44%), Gaps = 59/337 (17%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK--KSYSREKCLNLREVKCLRKLNH 58
M++Y + +G GSFG V +A ++ E VAIK +K K++ + + +R ++ + K +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDT 112
Query: 59 P---NIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQK------QQLFSESAVKAWLF 109
IV +K + + ++ VFE + NLY L+ + + F++ A LF
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 110 QVFRGLDYMHQQGYFHRDLKPENLLV---SQGTIKIADFGLAREIDAFPPYTERVGTRWY 166
L +H DLKPEN+L+ + IKI DFG + ++ + + +R+Y
Sbjct: 173 LATPELSIIHC------DLKPENILLCNPKRXAIKIVDFGSSCQLGQ--RIYQXIQSRFY 224
Query: 167 QAPEILFKSGL-YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSP----- 220
++PE+L G+ Y +DMW++G I+ E+ PLF G +E DQM KI VLG P
Sbjct: 225 RSPEVLL--GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 282
Query: 221 ------------------TMDSWADGLRQ-----------AMAINYQFPQLSGVNLSALM 251
+ DG R+ + + P S
Sbjct: 283 DQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHT 342
Query: 252 PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
+ +LI + +DP R ALQH FFK+
Sbjct: 343 VADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 136/302 (45%), Gaps = 45/302 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK----KSYSREKCLNLRE-----VKC 52
E Y + LG G V + ++K + + A+K + S+S E+ LRE V
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 53 LRKLN-HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQV 111
LRK++ HPNI+++K+ F VF+ M+ +L + +K L SE + + +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTL-SEKETRKIMRAL 120
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPE 170
+ +H+ HRDLKPEN+L+ IK+ DFG + ++D E GT Y APE
Sbjct: 121 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPE 180
Query: 171 ILFKS-----GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSW 225
I+ S Y +VDMW+ G IM LL P F QM
Sbjct: 181 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW---HRKQMLM------------- 224
Query: 226 ADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
LR M+ NYQF S S+ +L+ P KR TA EAL HPFF
Sbjct: 225 ---LRMIMSGNYQFG-------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 274
Query: 286 KR 287
++
Sbjct: 275 QQ 276
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 139/300 (46%), Gaps = 41/300 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNHPN 60
Y + K LG GSFG V A + +G+ VA+K + K + + RE+ LR L HP+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I+K+ ++I K + V E L+ + + + SE + + Q+ ++Y H+
Sbjct: 66 IIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCHR 121
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYS 179
HRDLKPENLL+ + +KIADFGL+ + G+ Y APE++
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAG 181
Query: 180 SKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQF 239
+VD+W+ G I+ +L R F DE+ VL + ++G+ Y
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPFD--DES------IPVL----FKNISNGV-------YTL 222
Query: 240 PQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL---YVPPHLR 296
P+ L P A+ LI+ + +P R + E +Q +FK L +PP L+
Sbjct: 223 PKF-------LSPGAA----GLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDLK 271
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 143/295 (48%), Gaps = 48/295 (16%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + + +G GS+ + V+K + A+K + KS R+ + + LR HPNI
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS-KRDPSEEIEIL--LRYGQHPNI 83
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
+ +K++ + +V+ V E M+ +L++ K +Q+ FSE L + + ++Y+H Q
Sbjct: 84 ITLKDVYDDGKHVYLVTELMRGG--ELLD-KILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 122 GYFHRDLKPENLLVSQGT-----IKIADFGLAREIDA------FPPYTERVGTRWYQAPE 170
G HRDLKP N+L + ++I DFG A+++ A P YT + APE
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN-----FVAPE 195
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLL-FRPLFQGTDEADQMYKICSVLGSPTMDSWADGL 229
+L + G Y D+W++G ++ +L + P G +D +I + +GS
Sbjct: 196 VLKRQG-YDEGCDIWSLGILLYTMLAGYTPFANG--PSDTPEEILTRIGSGKF------- 245
Query: 230 RQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
LSG N + + SE A +L+ + DP +R TA + LQHP+
Sbjct: 246 -----------TLSGGNWN----TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 129/289 (44%), Gaps = 40/289 (13%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKA--LKKSYSREKCLNLREVKCLRKLNHPNIVKVKE 66
K+G GS G V A KH+G+ VA+K L+K RE N EV +R +H N+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFN--EVVIMRDYHHDNVVDMYS 109
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHR 126
+ ++ V E ++ + + +E + V R L Y+H QG HR
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 127 DLKPEN-LLVSQGTIKIADFGLAREID-AFPPYTERVGTRWYQAPEILFKSGLYSSKVDM 184
D+K ++ LL S G IK++DFG ++ P VGT ++ APE++ + Y ++VD+
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP-YGTEVDI 224
Query: 185 WAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQLSG 244
W++G ++ E++ P + M +I L D L + ++ F L
Sbjct: 225 WSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKD-----LHKVSSVLRGFLDLML 279
Query: 245 VNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPP 293
V +P +R TA E L HPF K L PP
Sbjct: 280 VR----------------------EPSQRATAQELLGHPFLK--LAGPP 304
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 23/215 (10%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYS---REK-CLNLREVKCLRKLNHP 59
+ + ++LG+G FG V + +++ +GE VAIK ++ S RE+ CL E++ ++KLNHP
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL---EIQIMKKLNHP 72
Query: 60 NIVKVKELIVEKG------NVFFVFECMQCNLYQLMEAKKQKQQL--FSESAVKAWLFQV 111
N+V +E V G N + C L + Q + E ++ L +
Sbjct: 73 NVVSARE--VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 130
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQG----TIKIADFGLAREIDAFPPYTERVGTRWYQ 167
L Y+H+ HRDLKPEN+++ G KI D G A+E+D TE VGT Y
Sbjct: 131 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 190
Query: 168 APEILFKSGLYSSKVDMWAMGAIMAELLL-FRPLF 201
APE+L + Y+ VD W+ G + E + FRP
Sbjct: 191 APELLEQKK-YTVTVDYWSFGTLAFECITGFRPFL 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 110/215 (51%), Gaps = 23/215 (10%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYS---REK-CLNLREVKCLRKLNHP 59
+ + ++LG+G FG V + +++ +GE VAIK ++ S RE+ CL E++ ++KLNHP
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL---EIQIMKKLNHP 73
Query: 60 NIVKVKELIVEKG------NVFFVFECMQCNLYQLMEAKKQKQQL--FSESAVKAWLFQV 111
N+V +E V G N + C L + Q + E ++ L +
Sbjct: 74 NVVSARE--VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDI 131
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQG----TIKIADFGLAREIDAFPPYTERVGTRWYQ 167
L Y+H+ HRDLKPEN+++ G KI D G A+E+D TE VGT Y
Sbjct: 132 SSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYL 191
Query: 168 APEILFKSGLYSSKVDMWAMGAIMAELLL-FRPLF 201
APE+L + Y+ VD W+ G + E + FRP
Sbjct: 192 APELLEQKK-YTVTVDYWSFGTLAFECITGFRPFL 225
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 144/287 (50%), Gaps = 34/287 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E + + +KLG GS+G V++A++K +G++VAIK + ++ ++E+ +++ + P++
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI--IKEISIMQQCDSPHV 86
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
VK + +++ V E C + + + + + +E + L +GL+Y+H
Sbjct: 87 VKYYGSYFKNTDLWIVMEY--CGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM 144
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREI-DAFPPYTERVGTRWYQAPEILFKSGLYS 179
HRD+K N+L+ ++G K+ADFG+A ++ D +GT ++ APE++ + G Y+
Sbjct: 145 RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIG-YN 203
Query: 180 SKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQF 239
D+W++G E+ +P + AD ++ + ++ PT ++
Sbjct: 204 CVADIWSLGITAIEMAEGKPPY-----AD-IHPMRAIFMIPT----------NPPPTFRK 247
Query: 240 PQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
P+L N + + ++ P +R TA + LQHPF +
Sbjct: 248 PELWSDNFT-----------DFVKQCLVKSPEQRATATQLLQHPFVR 283
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 144/298 (48%), Gaps = 48/298 (16%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y + + +G GS+ + V+K + A+K + KS R+ + + LR HPNI
Sbjct: 27 DGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS-KRDPSEEIEIL--LRYGQHPNI 83
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
+ +K++ + +V+ V E M+ +L++ K +Q+ FSE L + + ++Y+H Q
Sbjct: 84 ITLKDVYDDGKHVYLVTELMRGG--ELLD-KILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 122 GYFHRDLKPENLLVSQGT-----IKIADFGLAREIDA------FPPYTERVGTRWYQAPE 170
G HRDLKP N+L + ++I DFG A+++ A P YT + APE
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN-----FVAPE 195
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLL-FRPLFQGTDEADQMYKICSVLGSPTMDSWADGL 229
+L + G Y D+W++G ++ +L + P G +D +I + +GS
Sbjct: 196 VLKRQG-YDEGCDIWSLGILLYTMLAGYTPFANGP--SDTPEEILTRIGSGKF------- 245
Query: 230 RQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
LSG N + + SE A +L+ + DP +R TA + LQHP+ +
Sbjct: 246 -----------TLSGGNWN----TVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 150/343 (43%), Gaps = 89/343 (25%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-------EVKCLR 54
+KY L +G GS+G V A+ + + AIK + K+ R+ +N + EV+ ++
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ--INPKDVERIKTEVRLMK 83
Query: 55 KLNHPNIVKVKEL------------------IVEKGNVFF---------------VFECM 81
KL+HPNI ++ E+ +++K NVF + C
Sbjct: 84 KLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP 143
Query: 82 QCNLYQLMEAKKQKQQLFSESA--------VKAWLFQVFRGLDYMHQQGYFHRDLKPENL 133
+CN EA F ES + + Q+F L Y+H QG HRD+KPEN
Sbjct: 144 ECN----EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENF 199
Query: 134 LVSQG---TIKIADFGLAREI-----DAFPPYTERVGTRWYQAPEILFKSG-LYSSKVDM 184
L S IK+ DFGL++E + T + GT ++ APE+L + Y K D
Sbjct: 200 LFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259
Query: 185 WAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQLSG 244
W+ G ++ LL+ F G ++AD + ++ + + ++ P
Sbjct: 260 WSAGVLLHLLLMGAVPFPGVNDADTISQVLN-----------------KKLCFENP---- 298
Query: 245 VNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
N + L P A + L+ +L + + +R A ALQHP+ +
Sbjct: 299 -NYNVLSPLARD----LLSNLLNRNVDERFDAMRALQHPWISQ 336
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 138/300 (46%), Gaps = 41/300 (13%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNHP 59
Y + K LG GSFG V A + +G+ VA+K + K + + RE+ LR L HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 60 NIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+I+K+ ++I K + V E L+ + + + SE + + Q+ ++Y H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCH 124
Query: 120 QQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
+ HRDLKPENLL+ + +KIADFGL+ + G+ Y APE++
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
+VD+W+ G I+ +L R F DE+ VL + ++G+ Y
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFD--DES------IPVL----FKNISNGV-------YT 225
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL---YVPPHL 295
P+ L P A+ LI+ + +P R + E +Q +FK L +PP L
Sbjct: 226 LPKF-------LSPGAA----GLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDL 274
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 139/309 (44%), Gaps = 55/309 (17%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKS-----YSREKCLNLREVKCLRKLNHPNIVKV 64
LG G F ++ + + EV A K + KS + REK E+ R L H ++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 104
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYF 124
+ VF V E C L+E K+++ L +E + +L Q+ G Y+H+
Sbjct: 105 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKAL-TEPEARYYLRQIVLGCQYLHRNRVI 161
Query: 125 HRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV--GTRWYQAPEILFKSGLYSSK 181
HRDLK NL +++ +KI DFGLA +++ + ++V GT Y APE+L K G +S +
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTPNYIAPEVLSKKG-HSFE 219
Query: 182 VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQ 241
VD+W++G IM LL+ +P F+ + + +I Y P+
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK 260
Query: 242 LSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR----------CLYV 291
+ P A+ +LI+ + DP RPT E L FF CL +
Sbjct: 261 -------HINPVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTI 309
Query: 292 PPHLRSTPA 300
PP P+
Sbjct: 310 PPRFSIAPS 318
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 43/305 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN-----LREVKCLRKL 56
+ Y L + +GSG+ V A E VAIK + + EKC L+E++ + +
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI----NLEKCQTSMDELLKEIQAMSQC 70
Query: 57 NHPNIVKVKELIVEKGNVFFVFECMQCN-----LYQLMEAKKQKQQLFSESAVKAWLFQV 111
+HPNIV V K ++ V + + + ++ + K + ES + L +V
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTER------VGTR 164
GL+Y+H+ G HRD+K N+L+ + G+++IADFG++ + T VGT
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS 224
+ APE++ + Y K D+W+ G EL G+
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIEL---------------------ATGAAPYHK 229
Query: 225 WADGLRQAMAINYQFPQL-SGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
+ + + P L +GV ++ + +I DP KRPTAAE L+H
Sbjct: 230 YPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK 289
Query: 284 FFKRC 288
FF++
Sbjct: 290 FFQKA 294
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 35/287 (12%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHPNIV 62
+ + LG+G+F V A K +G++ A+K + K + K ++ E+ LRK+ H NIV
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
++++ +++ V + + +L + +K ++E + QV + Y+H+ G
Sbjct: 84 ALEDIYESPNHLYLVMQLVSGG--ELFDRIVEKG-FYTEKDASTLIRQVLDAVYYLHRMG 140
Query: 123 YFHRDLKPENLLV----SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLKPENLL + I I+DFGL++ + GT Y APE+L + Y
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP-Y 199
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
S VD W++G I LL P F DE D Q + Y+
Sbjct: 200 SKAVDCWSIGVIAYILLCGYPPF--YDENDSKL-----------------FEQILKAEYE 240
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
F S S+ A + I +L DP KR T +A +HP+
Sbjct: 241 FD-------SPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 139/311 (44%), Gaps = 47/311 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK----KSYSREKCLNLRE-----VKC 52
E Y + LG G V + ++K + + A+K + S+S E+ LRE V
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 53 LRKLN-HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQV 111
LRK++ HPNI+++K+ F VF+ M+ +L + +K L SE + + +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKG--ELFDYLTEKVTL-SEKETRKIMRAL 133
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPE 170
+ +H+ HRDLKPEN+L+ IK+ DFG + ++D GT Y APE
Sbjct: 134 LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPE 193
Query: 171 ILFKS-----GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSW 225
I+ S Y +VDMW+ G IM LL P F QM
Sbjct: 194 IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW---HRKQMLM------------- 237
Query: 226 ADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
LR M+ NYQF S S+ +L+ P KR TA EAL HPFF
Sbjct: 238 ---LRMIMSGNYQFG-------SPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
Query: 286 KRCLYVPPHLR 296
++ YV +R
Sbjct: 288 QQ--YVVEEVR 296
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 134/305 (43%), Gaps = 43/305 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN-----LREVKCLRKL 56
+ Y L + +GSG+ V A E VAIK + + EKC L+E++ + +
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRI----NLEKCQTSMDELLKEIQAMSQC 65
Query: 57 NHPNIVKVKELIVEKGNVFFVFECMQCN-----LYQLMEAKKQKQQLFSESAVKAWLFQV 111
+HPNIV V K ++ V + + + ++ + K + ES + L +V
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTER------VGTR 164
GL+Y+H+ G HRD+K N+L+ + G+++IADFG++ + T VGT
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS 224
+ APE++ + Y K D+W+ G EL G+
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIEL---------------------ATGAAPYHK 224
Query: 225 WADGLRQAMAINYQFPQL-SGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHP 283
+ + + P L +GV ++ + +I DP KRPTAAE L+H
Sbjct: 225 YPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHK 284
Query: 284 FFKRC 288
FF++
Sbjct: 285 FFQKA 289
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 139/309 (44%), Gaps = 55/309 (17%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKS-----YSREKCLNLREVKCLRKLNHPNIVKV 64
LG G F ++ + + EV A K + KS + REK E+ R L H ++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 80
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYF 124
+ VF V E C L+E K+++ L +E + +L Q+ G Y+H+
Sbjct: 81 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKAL-TEPEARYYLRQIVLGCQYLHRNRVI 137
Query: 125 HRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV--GTRWYQAPEILFKSGLYSSK 181
HRDLK NL +++ +KI DFGLA +++ + ++V GT Y APE+L K G +S +
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTPNYIAPEVLSKKG-HSFE 195
Query: 182 VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQ 241
VD+W++G IM LL+ +P F+ + + +I Y P+
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK 236
Query: 242 LSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR----------CLYV 291
+ P A+ +LI+ + DP RPT E L FF CL +
Sbjct: 237 -------HINPVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTI 285
Query: 292 PPHLRSTPA 300
PP P+
Sbjct: 286 PPRFSIAPS 294
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 139/309 (44%), Gaps = 55/309 (17%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKS-----YSREKCLNLREVKCLRKLNHPNIVKV 64
LG G F ++ + + EV A K + KS + REK E+ R L H ++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 106
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYF 124
+ VF V E C L+E K+++ L +E + +L Q+ G Y+H+
Sbjct: 107 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKAL-TEPEARYYLRQIVLGCQYLHRNRVI 163
Query: 125 HRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV--GTRWYQAPEILFKSGLYSSK 181
HRDLK NL +++ +KI DFGLA +++ + ++V GT Y APE+L K G +S +
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVE-YDGERKKVLCGTPNYIAPEVLSKKG-HSFE 221
Query: 182 VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQ 241
VD+W++G IM LL+ +P F+ + + +I Y P+
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK 262
Query: 242 LSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR----------CLYV 291
+ P A+ +LI+ + DP RPT E L FF CL +
Sbjct: 263 -------HINPVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTI 311
Query: 292 PPHLRSTPA 300
PP P+
Sbjct: 312 PPRFSIAPS 320
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 137/308 (44%), Gaps = 53/308 (17%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKS-----YSREKCLNLREVKCLRKLNHPNIVKV 64
LG G F ++ + + EV A K + KS + REK E+ R L H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 82
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYF 124
+ VF V E C L+E K+++ L +E + +L Q+ G Y+H+
Sbjct: 83 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKAL-TEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 125 HRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV-GTRWYQAPEILFKSGLYSSKV 182
HRDLK NL +++ +KI DFGLA +++ + + GT Y APE+L K G +S +V
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFEV 198
Query: 183 DMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQL 242
D+W++G IM LL+ +P F+ + + +I Y P+
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK- 238
Query: 243 SGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR----------CLYVP 292
+ P A+ +LI+ + DP RPT E L FF CL +P
Sbjct: 239 ------HINPVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP 288
Query: 293 PHLRSTPA 300
P P+
Sbjct: 289 PRFSIAPS 296
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 38/288 (13%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNHP 59
Y + K LG GSFG V A + +G+ VA+K + K + + RE+ LR L HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 60 NIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+I+K+ ++I K + V E L+ + + + SE + + Q+ ++Y H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCH 130
Query: 120 QQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
+ HRDLKPENLL+ + +KIADFGL+ + G+ Y APE++
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
+VD+W+ G I+ +L R F DE+ VL + ++G+ Y
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFD--DES------IPVL----FKNISNGV-------YT 231
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
P+ L P A+ LI+ + +P R + E +Q +FK
Sbjct: 232 LPKF-------LSPGAA----GLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 137/308 (44%), Gaps = 53/308 (17%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKS-----YSREKCLNLREVKCLRKLNHPNIVKV 64
LG G F ++ + + EV A K + KS + REK E+ R L H ++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 86
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYF 124
+ VF V E C L+E K+++ L +E + +L Q+ G Y+H+
Sbjct: 87 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKAL-TEPEARYYLRQIVLGCQYLHRNRVI 143
Query: 125 HRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV-GTRWYQAPEILFKSGLYSSKV 182
HRDLK NL +++ +KI DFGLA +++ + + GT Y APE+L K G +S +V
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFEV 202
Query: 183 DMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQL 242
D+W++G IM LL+ +P F+ + + +I Y P+
Sbjct: 203 DVWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK- 242
Query: 243 SGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR----------CLYVP 292
+ P A+ +LI+ + DP RPT E L FF CL +P
Sbjct: 243 ------HINPVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP 292
Query: 293 PHLRSTPA 300
P P+
Sbjct: 293 PRFSIAPS 300
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 138/294 (46%), Gaps = 39/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS-YSREKCLNL----REVKCLRKLNH 58
Y L + +G G+F V + +N+ +G+ A+K + + ++ L+ RE L H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
P+IV++ E G ++ VFE M +L + + ++SE+ ++ Q+ L Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 118 MHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREI-DAFPPYTERVGTRWYQAPEIL 172
H HRD+KPEN+L++ +K+ DFG+A ++ ++ RVGT + APE++
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
K Y VD+W G I+ LL F GT E ++++ + G M+ RQ
Sbjct: 206 -KREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFE-GIIKGKYKMNP-----RQW 256
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
I SE A +L+ + DP +R T EAL HP+ K
Sbjct: 257 SHI-------------------SESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 38/288 (13%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNHP 59
Y + K LG GSFG V A + +G+ VA+K + K + + RE+ LR L HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 60 NIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+I+K+ ++I K + V E L+ + + + SE + + Q+ ++Y H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK----MSEQEARRFFQQIISAVEYCH 129
Query: 120 QQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
+ HRDLKPENLL+ + +KIADFGL+ + G+ Y APE++
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
+VD+W+ G I+ +L R F DE+ VL + ++G+ Y
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFD--DES------IPVL----FKNISNGV-------YT 230
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
P+ L P A+ LI+ + +P R + E +Q +FK
Sbjct: 231 LPKF-------LSPGAA----GLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 127/291 (43%), Gaps = 31/291 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
++Y L K +GSG+FG +K S E+VA+K +++ ++ + RE+ R L HPNI
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK-REIINHRSLRHPNI 76
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
V+ KE+I+ ++ V E +L E + FSE + + Q+ G+ Y H
Sbjct: 77 VRFKEVILTPTHLAIVMEYASGG--ELFE-RICNAGRFSEDEARFFFQQLISGVSYCHAM 133
Query: 122 GYFHRDLKPENLLVSQG---TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLK EN L+ +KI DFG ++ VGT Y APE+L K
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 193
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
D+W+ G + +L+ F+ +E K + + + + Y
Sbjct: 194 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKT---------------IHRILNVQYA 238
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
P + S + +LI + DP KR + E H +F + L
Sbjct: 239 IPDYVHI---------SPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 280
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 137/308 (44%), Gaps = 53/308 (17%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKS-----YSREKCLNLREVKCLRKLNHPNIVKV 64
LG G F ++ + + EV A K + KS + REK E+ R L H ++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS--MEISIHRSLAHQHVVGF 82
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYF 124
+ VF V E C L+E K+++ L +E + +L Q+ G Y+H+
Sbjct: 83 HGFFEDNDFVFVVLEL--CRRRSLLELHKRRKAL-TEPEARYYLRQIVLGCQYLHRNRVI 139
Query: 125 HRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV-GTRWYQAPEILFKSGLYSSKV 182
HRDLK NL +++ +KI DFGLA +++ + + GT Y APE+L K G +S +V
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKG-HSFEV 198
Query: 183 DMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQL 242
D+W++G IM LL+ +P F+ + + +I Y P+
Sbjct: 199 DVWSIGCIMYTLLVGKPPFETSCLKETYLRI-------------------KKNEYSIPK- 238
Query: 243 SGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK----------RCLYVP 292
+ P A+ +LI+ + DP RPT E L FF CL +P
Sbjct: 239 ------HINPVAA----SLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIP 288
Query: 293 PHLRSTPA 300
P P+
Sbjct: 289 PXFSIAPS 296
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 141/311 (45%), Gaps = 55/311 (17%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS-----YSREKCLNLREVKCLRK 55
M++Y + LG G F ++ + + EV A K + KS + +EK E+ +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 98
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
L++P++V + V+ V E C L+E K+++ + +E + ++ Q +G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEI--CRRRSLLELHKRRKAV-TEPEARYFMRQTIQGV 155
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV--GTRWYQAPEIL 172
Y+H HRDLK NL ++ +KI DFGLA +I+ F ++ GT Y APE+L
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIE-FDGERKKTLCGTPNYIAPEVL 214
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
K G +S +VD+W++G I+ LL+ +P F+ + + +I
Sbjct: 215 CKKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI------------------- 254
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF------- 285
Y P+ + P AS LI + DP RP+ AE L FF
Sbjct: 255 KKNEYSVPR-------HINPVASA----LIRRMLHADPTLRPSVAELLTDEFFTSGYAPM 303
Query: 286 ---KRCLYVPP 293
CL VPP
Sbjct: 304 RLPTSCLTVPP 314
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 128/291 (43%), Gaps = 31/291 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
++Y L K +G+G+FG +K + E+VA+K +++ ++ + RE+ R L HPNI
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVK-REIINHRSLRHPNI 77
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
V+ KE+I+ ++ V E +L E + FSE + + Q+ G+ Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGG--ELFE-RICNAGRFSEDEARFFFQQLISGVSYAHAM 134
Query: 122 GYFHRDLKPENLLVSQG---TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLK EN L+ +KIADFG ++ VGT Y APE+L K
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYD 194
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
D+W+ G + +L+ F+ +E K + + + + Y
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKT---------------IHRILNVQYA 239
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
P + S + +LI + DP KR + E H +F + L
Sbjct: 240 IPDYVHI---------SPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 140/310 (45%), Gaps = 53/310 (17%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS-----YSREKCLNLREVKCLRK 55
M++Y + LG G F ++ + + EV A K + KS + +EK E+ +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 98
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
L++P++V + V+ V E C L+E K+++ + +E + ++ Q +G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEI--CRRRSLLELHKRRKAV-TEPEARYFMRQTIQGV 155
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV-GTRWYQAPEILF 173
Y+H HRDLK NL ++ +KI DFGLA +I+ + + GT Y APE+L
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 215
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
K G +S +VD+W++G I+ LL+ +P F+ + + +I
Sbjct: 216 KKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------------------K 255
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF-------- 285
Y P+ + P AS LI + DP RP+ AE L FF
Sbjct: 256 KNEYSVPR-------HINPVASA----LIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304
Query: 286 --KRCLYVPP 293
CL VPP
Sbjct: 305 LPTSCLTVPP 314
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 140/310 (45%), Gaps = 53/310 (17%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS-----YSREKCLNLREVKCLRK 55
M++Y + LG G F ++ + + EV A K + KS + +EK E+ +
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 98
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
L++P++V + V+ V E C L+E K+++ + +E + ++ Q +G+
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEI--CRRRSLLELHKRRKAV-TEPEARYFMRQTIQGV 155
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV-GTRWYQAPEILF 173
Y+H HRDLK NL ++ +KI DFGLA +I+ + + GT Y APE+L
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLC 215
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
K G +S +VD+W++G I+ LL+ +P F+ + + +I
Sbjct: 216 KKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------------------K 255
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF-------- 285
Y P+ + P AS LI + DP RP+ AE L FF
Sbjct: 256 KNEYSVPR-------HINPVASA----LIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304
Query: 286 --KRCLYVPP 293
CL VPP
Sbjct: 305 LPTSCLTVPP 314
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 140/310 (45%), Gaps = 53/310 (17%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS-----YSREKCLNLREVKCLRK 55
M++Y + LG G F ++ + + EV A K + KS + +EK E+ +
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMST--EIAIHKS 82
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
L++P++V + V+ V E C L+E K+++ + +E + ++ Q +G+
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEI--CRRRSLLELHKRRKAV-TEPEARYFMRQTIQGV 139
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV-GTRWYQAPEILF 173
Y+H HRDLK NL ++ +KI DFGLA +I+ + + GT Y APE+L
Sbjct: 140 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLC 199
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
K G +S +VD+W++G I+ LL+ +P F+ + + +I
Sbjct: 200 KKG-HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRI-------------------K 239
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF-------- 285
Y P+ + P AS LI + DP RP+ AE L FF
Sbjct: 240 KNEYSVPR-------HINPVASA----LIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 288
Query: 286 --KRCLYVPP 293
CL VPP
Sbjct: 289 LPTSCLTVPP 298
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 148/337 (43%), Gaps = 55/337 (16%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN-KHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E+Y + LG G+FG V Q V+ + G VA+K +K ++ L E+ L K+N +
Sbjct: 33 ERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARL-EINVLEKINEKD 91
Query: 61 ------IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
V++ + G++ FE + + + + K + V+ FQ+ +
Sbjct: 92 PDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFL--KDNNYLPYPIHQVRHMAFQLCQA 149
Query: 115 LDYMHQQGYFHRDLKPENLL--------------------VSQGTIKIADFGLAREIDAF 154
+ ++H H DLKPEN+L V +++ DFG A
Sbjct: 150 VKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA--TFDH 207
Query: 155 PPYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKIC 214
++ V TR Y+APE++ + G +S D+W++G I+ E + LFQ D + + +
Sbjct: 208 EHHSTIVSTRHYRAPEVILELG-WSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLAMME 266
Query: 215 SVLGSPTMDSWADGLRQAMAINY---------------QFPQLSGVNLSALMPSASEDA- 258
+LG + +R+ Y ++ + + L + S +E+
Sbjct: 267 RILGPIP----SRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHH 322
Query: 259 --INLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPP 293
+LIES+ ++P KR T EALQHPFF R PP
Sbjct: 323 QLFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEPP 359
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL-------REVKCLRKL 56
Y L LG G+FG V ++ +G VA+K L +R+K +L RE++ L+
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKIL----NRQKIRSLDVVGKIRREIQNLKLF 73
Query: 57 NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HP+I+K+ ++I ++F V E + +L + + +L E + Q+ G+D
Sbjct: 74 RHPHIIKLYQVISTPSDIFMVMEYVSGG--ELFDYICKNGRL-DEKESRRLFQQILSGVD 130
Query: 117 YMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
Y H+ HRDLKPEN+L+ + KIADFGL+ + G+ Y APE++
Sbjct: 131 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGR 190
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
+VD+W+ G I+ LL F KIC DG+
Sbjct: 191 LYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKIC------------DGI------ 232
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
+ PQ L PS I+L++ + DP KR T + +H +FK+ L
Sbjct: 233 -FYTPQY-------LNPS----VISLLKHMLQVDPMKRATIKDIREHEWFKQDL 274
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 125/291 (42%), Gaps = 31/291 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
++Y L K +GSG+FG +K S E+VA+K +++ + RE+ R L HPNI
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVK-REIINHRSLRHPNI 77
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
V+ KE+I+ ++ V E +L E + FSE + + Q+ G+ Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGG--ELFE-RICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 122 GYFHRDLKPENLLVSQG---TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLK EN L+ +KI DFG ++ VGT Y APE+L K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
D+W+ G + +L+ F+ +E K + + + + Y
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKT---------------IHRILNVQYA 239
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
P + S + +LI + DP KR + E H +F + L
Sbjct: 240 IPDYVHI---------SPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 134/302 (44%), Gaps = 46/302 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVK--------CL 53
+KY +G G V + V++ +G A+K ++ + R L EV+ L
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL 153
Query: 54 RKL-NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
R++ HP+I+ + + +F VF+ M+ +L + +K L SE ++ + +
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFLVFDLMRKG--ELFDYLTEKVAL-SEKETRSIMRSLL 210
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
+ ++H HRDLKPEN+L+ I+++DFG + ++ E GT Y APEI
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEI 270
Query: 172 LFKSGL------YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSW 225
L K + Y +VD+WA G I+ LL P F + +L
Sbjct: 271 L-KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF---------WHRRQILM------- 313
Query: 226 ADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
LR M YQF S S +LI L DP R TA +ALQHPFF
Sbjct: 314 ---LRMIMEGQYQFS-------SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
Query: 286 KR 287
+R
Sbjct: 364 ER 365
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 47/294 (15%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
++ + + + LG G FG V+ A K + ++A+K L KS ++ + RE++ L
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 58 HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ ++ ++ + E + LY+ + QK F E ++ ++ L
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALH 128
Query: 117 YMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEIL 172
Y H++ HRD+KPENLL+ +G +KIADFG + P R GT Y PE++
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ + KVD+W G + E L+ P F SP S + R+
Sbjct: 185 -EGKTHDEKVDLWCAGVLCYEFLVGMPPFD----------------SP---SHTETHRRI 224
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
+ ++ +FP P S+ + +LI L + P +R ++HP+ K
Sbjct: 225 VNVDLKFP-----------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 38/284 (13%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKA--LKKSYSREKCLNLREVKCLRKLNHPNIVKVKE 66
K+G GS G V A + SG++VA+K L+K RE N EV +R H N+V++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN--EVVIMRDYQHENVVEMYN 93
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHR 126
+ ++ V E ++ + + +E + A V + L +H QG HR
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 127 DLKPENLLVSQ-GTIKIADFGLAREID-AFPPYTERVGTRWYQAPEILFKSGLYSSKVDM 184
D+K +++L++ G +K++DFG ++ P VGT ++ APE++ + Y +VD+
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 208
Query: 185 WAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQLSG 244
W++G ++ E++ P + M I L P+L
Sbjct: 209 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---------------------PRLK- 246
Query: 245 VNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
NL + PS ++ L DP +R TAAE L+HPF +
Sbjct: 247 -NLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA 285
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 38/284 (13%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKA--LKKSYSREKCLNLREVKCLRKLNHPNIVKVKE 66
K+G GS G V A + SG++VA+K L+K RE N EV +R H N+V++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN--EVVIMRDYQHENVVEMYN 95
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHR 126
+ ++ V E ++ + + +E + A V + L +H QG HR
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 127 DLKPENLLVSQ-GTIKIADFGLAREID-AFPPYTERVGTRWYQAPEILFKSGLYSSKVDM 184
D+K +++L++ G +K++DFG ++ P VGT ++ APE++ + Y +VD+
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 210
Query: 185 WAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQLSG 244
W++G ++ E++ P + M I L P+L
Sbjct: 211 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---------------------PRLK- 248
Query: 245 VNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
NL + PS ++ L DP +R TAAE L+HPF +
Sbjct: 249 -NLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA 287
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 113/225 (50%), Gaps = 22/225 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCL----RKL 56
+E + L K LG GSFG V+ A K + + AIKALKK L +V+C R L
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV----VLMDDDVECTMVEKRVL 72
Query: 57 N----HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQ 110
+ HP + + K N+FFV E + +Y + K F S + +
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-----FDLSRATFYAAE 127
Query: 111 VFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQA 168
+ GL ++H +G +RDLK +N+L+ + G IKIADFG+ +E + E GT Y A
Sbjct: 128 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIA 187
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKI 213
PEIL Y+ VD W+ G ++ E+L+ + F G DE + + I
Sbjct: 188 PEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 127/291 (43%), Gaps = 31/291 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
++Y L K +GSG+FG +K S E+VA+K +++ ++ + RE+ R L HPNI
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK-REIINHRSLRHPNI 77
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
V+ KE+I+ ++ V E +L E + FSE + + Q+ G+ Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGG--ELFE-RICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 122 GYFHRDLKPENLLVSQG---TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLK EN L+ +KI FG ++ + VGT Y APE+L K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
D+W+ G + +L+ F+ +E K + + + + Y
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKT---------------IHRILNVQYA 239
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
P + S + +LI + DP KR + E H +F + L
Sbjct: 240 IPDYVHI---------SPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 38/284 (13%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKA--LKKSYSREKCLNLREVKCLRKLNHPNIVKVKE 66
K+G GS G V A + SG++VA+K L+K RE N EV +R H N+V++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN--EVVIMRDYQHENVVEMYN 88
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHR 126
+ ++ V E ++ + + +E + A V + L +H QG HR
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 127 DLKPENLLVSQ-GTIKIADFGLAREID-AFPPYTERVGTRWYQAPEILFKSGLYSSKVDM 184
D+K +++L++ G +K++DFG ++ P VGT ++ APE++ + Y +VD+
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 203
Query: 185 WAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQLSG 244
W++G ++ E++ P + M I L P+L
Sbjct: 204 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---------------------PRLK- 241
Query: 245 VNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
NL + PS ++ L DP +R TAAE L+HPF +
Sbjct: 242 -NLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA 280
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 38/284 (13%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKA--LKKSYSREKCLNLREVKCLRKLNHPNIVKVKE 66
K+G GS G V A + SG++VA+K L+K RE N EV +R H N+V++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN--EVVIMRDYQHENVVEMYN 138
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHR 126
+ ++ V E ++ + + +E + A V + L +H QG HR
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 127 DLKPENLLVSQ-GTIKIADFGLAREID-AFPPYTERVGTRWYQAPEILFKSGLYSSKVDM 184
D+K +++L++ G +K++DFG ++ P VGT ++ APE++ + Y +VD+
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 253
Query: 185 WAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQLSG 244
W++G ++ E++ P + M I L P+L
Sbjct: 254 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---------------------PRLK- 291
Query: 245 VNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
NL + PS ++ L DP +R TAAE L+HPF +
Sbjct: 292 -NLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA 330
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 38/284 (13%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKA--LKKSYSREKCLNLREVKCLRKLNHPNIVKVKE 66
K+G GS G V A + SG++VA+K L+K RE N EV +R H N+V++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN--EVVIMRDYQHENVVEMYN 84
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHR 126
+ ++ V E ++ + + +E + A V + L +H QG HR
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 127 DLKPENLLVSQ-GTIKIADFGLAREID-AFPPYTERVGTRWYQAPEILFKSGLYSSKVDM 184
D+K +++L++ G +K++DFG ++ P VGT ++ APE++ + Y +VD+
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 199
Query: 185 WAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQLSG 244
W++G ++ E++ P + M I L P+L
Sbjct: 200 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---------------------PRLK- 237
Query: 245 VNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
NL + PS ++ L DP +R TAAE L+HPF +
Sbjct: 238 -NLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA 276
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 47/294 (15%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
++ + + + LG G FG V+ A K + ++A+K L KS ++ + RE++ L
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 72
Query: 58 HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ ++ ++ + E + LY+ + QK F E ++ ++ L
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALH 128
Query: 117 YMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEIL 172
Y H++ HRD+KPENLL+ +G +KIADFG + P R GT Y PE++
Sbjct: 129 YCHERKVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMI 184
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ + KVD+W G + E L+ P F SP S + R+
Sbjct: 185 -EGKTHDEKVDLWCAGVLCYEFLVGMPPFD----------------SP---SHTETHRRI 224
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
+ ++ +FP P S+ + +LI L + P +R ++HP+ K
Sbjct: 225 VNVDLKFP-----------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 40/305 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR---EVKCLRKLNHPN 60
Y + + LG GSFG V A + + + VA+K + + ++ +++R E+ L+ L HP+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I+K+ ++I ++ V E L+ + KK+ +E + + Q+ ++Y H+
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKR----MTEDEGRRFFQQIICAIEYCHR 126
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYS 179
HRDLKPENLL+ +KIADFGL+ + G+ Y APE++
Sbjct: 127 HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAG 186
Query: 180 SKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQF 239
+VD+W+ G ++ +L+ R F + K+ S + Y
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCV-------------------YVM 227
Query: 240 PQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLRSTP 299
P L P A +LI + DP +R T E + P+F L P +LR
Sbjct: 228 PDF-------LSPGAQ----SLIRRMIVADPMQRITIQEIRRDPWFNVNL--PDYLRPME 274
Query: 300 AVAAT 304
V +
Sbjct: 275 EVQGS 279
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 47/294 (15%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
++ + + + LG G FG V+ A K + ++A+K L KS ++ + RE++ L
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR 73
Query: 58 HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ ++ ++ + E + LY+ + QK F E ++ ++ L
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELADALH 129
Query: 117 YMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEIL 172
Y H++ HRD+KPENLL+ +G +KIADFG + P R GT Y PE++
Sbjct: 130 YCHERKVIHRDIKPENLLMGYKGELKIADFGWS----VHAPSLRRRXMCGTLDYLPPEMI 185
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ + KVD+W G + E L+ P F SP S + R+
Sbjct: 186 -EGKTHDEKVDLWCAGVLCYEFLVGMPPFD----------------SP---SHTETHRRI 225
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
+ ++ +FP P S+ + +LI L + P +R ++HP+ K
Sbjct: 226 VNVDLKFP-----------PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 142/326 (43%), Gaps = 51/326 (15%)
Query: 3 KYSLTKKLGSGSFGCVWQAVN-KHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLN--H 58
+Y + LG G+FG V + ++ K G VA+K +K C R E++ L LN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTD 72
Query: 59 PN----IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
PN V++ E G++ VFE + + Y + K+ F ++ +Q+ +
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI--KENGFLPFRLDHIRKMAYQICKS 130
Query: 115 LDYMHQQGYFHRDLKPENLLVSQG--------------------TIKIADFGLAREIDAF 154
++++H H DLKPEN+L Q IK+ DFG A D
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH 190
Query: 155 PPYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKIC 214
++ V TR Y+APE++ G +S D+W++G I+ E L +F D + + +
Sbjct: 191 --HSTLVSTRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMME 247
Query: 215 SVLGSPTMDSWADGLRQAMAINY------------QFPQLSGVNLSALMPSAS---EDAI 259
+LG P R+ ++ ++ + L M S E
Sbjct: 248 RILG-PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLF 306
Query: 260 NLIESLCSWDPCKRPTAAEALQHPFF 285
+LI+ + +DP KR T EAL+HPFF
Sbjct: 307 DLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 130/284 (45%), Gaps = 38/284 (13%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKA--LKKSYSREKCLNLREVKCLRKLNHPNIVKVKE 66
K+G GS G V A + SG++VA+K L+K RE N EV +R H N+V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFN--EVVIMRDYQHENVVEMYN 215
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHR 126
+ ++ V E ++ + + +E + A V + L +H QG HR
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 127 DLKPENLLVSQ-GTIKIADFGLAREID-AFPPYTERVGTRWYQAPEILFKSGLYSSKVDM 184
D+K +++L++ G +K++DFG ++ P VGT ++ APE++ + Y +VD+
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP-YGPEVDI 330
Query: 185 WAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQLSG 244
W++G ++ E++ P + M I L P+L
Sbjct: 331 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---------------------PRLK- 368
Query: 245 VNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
NL + PS ++ L DP +R TAAE L+HPF +
Sbjct: 369 -NLHKVSPSLK----GFLDRLLVRDPAQRATAAELLKHPFLAKA 407
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 110/239 (46%), Gaps = 40/239 (16%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHP---------- 59
LG G+FG V +A N AIK ++ + + + L EV L LNH
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI-LSEVMLLASLNHQYVVRYYAAWL 72
Query: 60 ---NIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAW-LF-QVFR 113
N VK + +K +F E C LY L+ ++ QQ + W LF Q+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ-----RDEYWRLFRQILE 127
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREID---------------AFPPY 157
L Y+H QG HRDLKP N+ + + +KI DFGLA+ + +
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 158 TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSV 216
T +GT Y A E+L +G Y+ K+DM+++G I E++ P G + + + K+ SV
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKLRSV 244
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 126/291 (43%), Gaps = 31/291 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
++Y L K +GSG+FG +K S E+VA+K +++ ++ + RE+ R L HPNI
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVK-REIINHRSLRHPNI 77
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
V+ KE+I+ ++ V E +L E + FSE + + Q+ G+ Y H
Sbjct: 78 VRFKEVILTPTHLAIVMEYASGG--ELFE-RICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 122 GYFHRDLKPENLLVSQG---TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
HRDLK EN L+ +KI FG ++ VGT Y APE+L K
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 179 SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQ 238
D+W+ G + +L+ F+ +E K + + + + Y
Sbjct: 195 GKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKT---------------IHRILNVQYA 239
Query: 239 FPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
P + S + +LI + DP KR + E H +F + L
Sbjct: 240 IPDYVHI---------SPECRHLISRIFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 110/239 (46%), Gaps = 40/239 (16%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHP---------- 59
LG G+FG V +A N AIK ++ + + + L EV L LNH
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI-LSEVMLLASLNHQYVVRYYAAWL 72
Query: 60 ---NIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAW-LF-QVFR 113
N VK + +K +F E C LY L+ ++ QQ + W LF Q+
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ-----RDEYWRLFRQILE 127
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREID---------------AFPPY 157
L Y+H QG HRDLKP N+ + + +KI DFGLA+ + +
Sbjct: 128 ALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 158 TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSV 216
T +GT Y A E+L +G Y+ K+DM+++G I E++ P G + + + K+ SV
Sbjct: 188 TSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKLRSV 244
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNI 61
Y L K +G G+F V A + +G+ VA++ + K+ L REV+ ++ LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ E+I + ++ V E ++ + A + E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR----MKEKEARAKFRQIVSAVQYCHQ 131
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYS 179
+ HRDLK ENLL+ IKIADFG + E E G+ Y APE LF+ Y
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPE-LFQGKKYD 190
Query: 180 S-KVDMWAMGAIMAELL 195
+VD+W++G I+ L+
Sbjct: 191 GPEVDVWSLGVILYTLV 207
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 134/304 (44%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 68
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 69 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 125
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + TE T +Y A
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVA 185
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y DMW++G IM LL P F Y + SP M +
Sbjct: 186 PEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 231
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 232 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Query: 289 LYVP 292
VP
Sbjct: 283 TKVP 286
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 133/290 (45%), Gaps = 39/290 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK-KSYSREKCLNLREVKCLRKLNHPN 60
E ++ ++G GSFG V++ ++ H+ EVVAIK + + E +E+ L + + P
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 61 IVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
I + ++ ++ + E + + L+ K E+ + L ++ +GLDY+H
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLH 133
Query: 120 QQGYFHRDLKPENLLVS-QGTIKIADFGLAREI-DAFPPYTERVGTRWYQAPEILFKSGL 177
+ HRD+K N+L+S QG +K+ADFG+A ++ D VGT ++ APE++ K
Sbjct: 134 SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSA 192
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
Y K D+W++G EL P P D M + +
Sbjct: 193 YDFKADIWSLGITAIELAKGEP--------------------PNSD------LHPMRVLF 226
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
P+ S L S+ +E+ + DP RPTA E L+H F R
Sbjct: 227 LIPKNSPPTLEG---QHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITR 273
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 43/311 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+KY+ +K+G G+ G V+ A++ +G+ VAI+ + +K L + E+ +R+ +PNI
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 62 VKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
V + + ++ V E + +L ++ + E + A + + L+++H
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHS 134
Query: 121 QGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEILFKSG 176
HRD+K +N+L+ G++K+ DFG +I P ++R VGT ++ APE++ +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSEMVGTPYWMAPEVVTRKA 192
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y KVD+W++G + E++ P + + +Y I + G+P +
Sbjct: 193 -YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPEL-------------- 236
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
Q P+ LSA+ + + D KR +A E LQH F K P
Sbjct: 237 -QNPE----KLSAIFR-------DFLNRCLDMDVEKRGSAKELLQHQFLK---IAKPLSS 281
Query: 297 STPAVAATRRG 307
TP +AA +
Sbjct: 282 LTPLIAAAKEA 292
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 132/280 (47%), Gaps = 37/280 (13%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYS-REKCLNLREVKCLRKLNHPNIVKVKELI 68
LGSG+F V+ + +G++ A+K +KKS + R+ L E+ L+K+ H NIV ++++
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE-NEIAVLKKIKHENIVTLEDIY 75
Query: 69 VEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHRDL 128
+ + V + + +L + + ++ +++E + QV + Y+H+ G HRDL
Sbjct: 76 ESTTHYYLVMQLVSGG--ELFD-RILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDL 132
Query: 129 KPENLLV----SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSSKVDM 184
KPENLL I I DFGL++ ++ + GT Y APE+L + YS VD
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLAQKP-YSKAVDC 190
Query: 185 WAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQLSG 244
W++G I LL P F E+ KI +G Y+F
Sbjct: 191 WSIGVITYILLCGYPPFYEETESKLFEKI------------KEGY-------YEFE---- 227
Query: 245 VNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
S SE A + I L DP +R T +AL HP+
Sbjct: 228 ---SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 43/311 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+KY+ +K+G G+ G V+ A++ +G+ VAI+ + +K L + E+ +R+ +PNI
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 62 VKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
V + + ++ V E + +L ++ + E + A + + L+++H
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHS 134
Query: 121 QGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEILFKSG 176
HRD+K +N+L+ G++K+ DFG +I P ++R VGT ++ APE++ +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSTMVGTPYWMAPEVVTRKA 192
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y KVD+W++G + E++ P + + +Y I + G+P +
Sbjct: 193 -YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPEL-------------- 236
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
Q P+ LSA+ + + D KR +A E LQH F K P
Sbjct: 237 -QNPE----KLSAIFR-------DFLNRCLDMDVEKRGSAKELLQHQFLK---IAKPLSS 281
Query: 297 STPAVAATRRG 307
TP +AA +
Sbjct: 282 LTPLIAAAKEA 292
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 43/311 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+KY+ +K+G G+ G V+ A++ +G+ VAI+ + +K L + E+ +R+ +PNI
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 62 VKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
V + + ++ V E + +L ++ + E + A + + L+++H
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHS 134
Query: 121 QGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEILFKSG 176
HRD+K +N+L+ G++K+ DFG +I P ++R VGT ++ APE++ +
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSXMVGTPYWMAPEVVTRKA 192
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y KVD+W++G + E++ P + + +Y I + G+P +
Sbjct: 193 -YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPEL-------------- 236
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
Q P+ LSA+ + + D KR +A E LQH F K P
Sbjct: 237 -QNPE----KLSAIFR-------DFLNRCLEMDVEKRGSAKELLQHQFLK---IAKPLSS 281
Query: 297 STPAVAATRRG 307
TP +AA +
Sbjct: 282 LTPLIAAAKEA 292
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNI 61
Y L K +G G+F V A + +G VA+K + K+ L REV+ ++ LNHPNI
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ E+I + ++ V E ++ + A + E +A Q+ + Y HQ
Sbjct: 77 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR----MKEKEARAKFRQIVSAVQYCHQ 132
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYS 179
+ HRDLK ENLL+ IKIADFG + E G+ Y APE LF+ Y
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPE-LFQGKKYD 191
Query: 180 S-KVDMWAMGAIMAELL 195
+VD+W++G I+ L+
Sbjct: 192 GPEVDVWSLGVILYTLV 208
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 22/225 (9%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCL----RKL 56
+E + L K LG GSFG V+ A K + + AIKALKK L +V+C R L
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDV----VLMDDDVECTMVEKRVL 71
Query: 57 N----HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQ 110
+ HP + + K N+FFV E + +Y + K F S + +
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK-----FDLSRATFYAAE 126
Query: 111 VFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERV-GTRWYQA 168
+ GL ++H +G +RDLK +N+L+ + G IKIADFG+ +E T GT Y A
Sbjct: 127 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIA 186
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKI 213
PEIL Y+ VD W+ G ++ E+L+ + F G DE + + I
Sbjct: 187 PEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 125/238 (52%), Gaps = 12/238 (5%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KKLG+G FG VW +S +V A+K LK + L E ++ L H +
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTMSVQAF-LEEANLMKTLQHDKL 69
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
V++ ++ ++ ++ + E M + +L +++ + + L + + + Q+ G+ Y+ +
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPK--LIDFSAQIAEGMAYIER 127
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKSG 176
+ Y HRDL+ N+LVS+ + KIADFGLAR I+ YT R G ++ + APE + G
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEAI-NFG 185
Query: 177 LYSSKVDMWAMGAIMAELLLFRPL-FQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
++ K ++W+ G ++ E++ + + + G AD M + P M++ D L M
Sbjct: 186 CFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPDELYDIM 243
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNI 61
Y L K +G G+F V A + +G+ VA+K + K+ L REV+ ++ LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ E+I + ++ V E ++ + A + E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR----MKEKEARAKFRQIVSAVQYCHQ 131
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYS 179
+ HRDLK ENLL+ IKIADFG + E G+ Y APE LF+ Y
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYD 190
Query: 180 S-KVDMWAMGAIMAELL 195
+VD+W++G I+ L+
Sbjct: 191 GPEVDVWSLGVILYTLV 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 146/311 (46%), Gaps = 43/311 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+KY+ +K+G G+ G V+ A++ +G+ VAI+ + +K L + E+ +R+ +PNI
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 62 VKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
V + + ++ V E + +L ++ + E + A + + L+++H
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHS 135
Query: 121 QGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEILFKSG 176
HRD+K +N+L+ G++K+ DFG +I P ++R VGT ++ APE++ +
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSXMVGTPYWMAPEVVTRKA 193
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y KVD+W++G + E++ P + + +Y I + G+P +
Sbjct: 194 -YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPEL-------------- 237
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
Q P+ LSA+ + + D KR +A E +QH F K P
Sbjct: 238 -QNPE----KLSAIFR-------DFLNRCLEMDVEKRGSAKELIQHQFLK---IAKPLSS 282
Query: 297 STPAVAATRRG 307
TP +AA +
Sbjct: 283 LTPLIAAAKEA 293
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNI 61
Y L K +G G+F V A + +G+ VA+K + K+ L REV+ ++ LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ E+I + ++ V E ++ + A + E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR----MKEKEARAKFRQIVSAVQYCHQ 131
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYS 179
+ HRDLK ENLL+ IKIADFG + E G+ Y APE LF+ Y
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYD 190
Query: 180 S-KVDMWAMGAIMAELL 195
+VD+W++G I+ L+
Sbjct: 191 GPEVDVWSLGVILYTLV 207
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ Q G I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F DE Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADEPIQIYEKIVS 252
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 36/217 (16%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNHPNIVKVKE 66
LG G FG V++A NK AIK ++ + +REK + REVK L KL HP IV+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM--REVKALAKLEHPGIVRYFN 70
Query: 67 LIVEKGN----------VFFVFE---CMQCNLYQLMEAKKQKQQLFSESAVKAWLF-QVF 112
+EK V+ + C + NL M + ++ E +V +F Q+
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEE--RERSVCLHIFLQIA 128
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREID-------------AFPPYT 158
++++H +G HRDLKP N+ + +K+ DFGL +D A+ +T
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 159 ERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+VGT+ Y +PE + + YS KVD++++G I+ ELL
Sbjct: 189 GQVGTKLYMSPEQIHGNS-YSHKVDIFSLGLILFELL 224
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 105/206 (50%), Gaps = 28/206 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNI 61
Y L K +G G+F V A + +G+ VA+K + K+ L REV+ ++ LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ E+I + ++ V E ++ + A + E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR----MKEKEARAKFRQIVSAVQYCHQ 131
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLARE------IDAF---PPYTERVGTRWYQAPE 170
+ HRDLK ENLL+ IKIADFG + E +DAF PPY APE
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYA---------APE 182
Query: 171 ILFKSGLYSS-KVDMWAMGAIMAELL 195
LF+ Y +VD+W++G I+ L+
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 116
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + +T GT Y APEI+
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-ATWT-LCGTPEYLAPEII 231
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 232 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 273
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 141/326 (43%), Gaps = 51/326 (15%)
Query: 3 KYSLTKKLGSGSFGCVWQAVN-KHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLN--H 58
+Y + LG G+FG V + ++ K G VA+K +K C R E++ L LN
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTD 72
Query: 59 PN----IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
PN V++ E G++ VFE + + Y + K+ F ++ +Q+ +
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI--KENGFLPFRLDHIRKMAYQICKS 130
Query: 115 LDYMHQQGYFHRDLKPENLLVSQG--------------------TIKIADFGLAREIDAF 154
++++H H DLKPEN+L Q IK+ DFG A D
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH 190
Query: 155 PPYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKIC 214
++ V R Y+APE++ G +S D+W++G I+ E L +F D + + +
Sbjct: 191 --HSTLVXXRHYRAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMME 247
Query: 215 SVLGSPTMDSWADGLRQAMAINY------------QFPQLSGVNLSALMPSAS---EDAI 259
+LG P R+ ++ ++ + L M S E
Sbjct: 248 RILG-PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLF 306
Query: 260 NLIESLCSWDPCKRPTAAEALQHPFF 285
+LI+ + +DP KR T EAL+HPFF
Sbjct: 307 DLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 120
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 121 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 177
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + T T +Y A
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 237
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y DMW++G IM LL P F Y + SP M +
Sbjct: 238 PEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 283
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 284 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 334
Query: 289 LYVP 292
VP
Sbjct: 335 TKVP 338
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 114
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 115 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 171
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + T T +Y A
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y DMW++G IM LL P F Y + SP M +
Sbjct: 232 PEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 277
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 278 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328
Query: 289 LYVP 292
VP
Sbjct: 329 TKVP 332
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNI 61
Y L K +G G+F V A + +G VAIK + K+ L REV+ ++ LNHPNI
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 73
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ E+I + ++ + E ++ + A + E ++ Q+ + Y HQ
Sbjct: 74 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR----MKEKEARSKFRQIVSAVQYCHQ 129
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYS 179
+ HRDLK ENLL+ IKIADFG + E G+ Y APE LF+ Y
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPE-LFQGKKYD 188
Query: 180 S-KVDMWAMGAIMAELL 195
+VD+W++G I+ L+
Sbjct: 189 GPEVDVWSLGVILYTLV 205
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLAGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNI 61
Y L K +G G+F V A + +G+ VA++ + K+ L REV+ ++ LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ E+I + ++ V E ++ + A + E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR----MKEKEARAKFRQIVSAVQYCHQ 131
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYS 179
+ HRDLK ENLL+ IKIADFG + E G+ Y APE LF+ Y
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYD 190
Query: 180 S-KVDMWAMGAIMAELL 195
+VD+W++G I+ L+
Sbjct: 191 GPEVDVWSLGVILYTLV 207
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 70
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 71 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 127
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + T T +Y A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y DMW++G IM LL P F Y + SP M +
Sbjct: 188 PEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 233
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 234 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Query: 289 LYVP 292
VP
Sbjct: 285 TKVP 288
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 84
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 85 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 141
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + T T +Y A
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 201
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y DMW++G IM LL P F Y + SP M +
Sbjct: 202 PEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 247
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 248 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 298
Query: 289 LYVP 292
VP
Sbjct: 299 TKVP 302
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 68
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 69 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 125
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + T T +Y A
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 185
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y DMW++G IM LL P F Y + SP M +
Sbjct: 186 PEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 231
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 232 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Query: 289 LYVP 292
VP
Sbjct: 283 TKVP 286
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 131/291 (45%), Gaps = 41/291 (14%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHP 59
++ Y L + +G+G F V A + +GE+VAIK + K+ ++ E++ L+ L H
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQ 68
Query: 60 NIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
+I ++ ++ +F V E C L+ + + Q SE + Q+ + Y+
Sbjct: 69 HICQLYHVLETANKIFMVLEYCPGGELFDYIIS----QDRLSEEETRVVFRQIVSAVAYV 124
Query: 119 HQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERV--GTRWYQAPEILFKS 175
H QGY HRDLKPENLL + +K+ DFGL + Y + G+ Y APE++
Sbjct: 125 HSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGK 184
Query: 176 GLYSSKVDMWAMGAIMAELLL-FRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
S+ D+W+MG ++ L+ F P D +YK + M
Sbjct: 185 SYLGSEADVWSMGILLYVLMCGFLPF--DDDNVMALYK------------------KIMR 224
Query: 235 INYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
Y P+ L PS +I L++ + DP KR + L HP+
Sbjct: 225 GKYDVPKW-------LSPS----SILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLXGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 70
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 71 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 127
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + T T +Y A
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 187
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y DMW++G IM LL P F Y + SP M +
Sbjct: 188 PEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 233
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 234 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Query: 289 LYVP 292
VP
Sbjct: 285 TKVP 288
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 39/291 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E + + +LG G+FG V++A NK +G + A K ++ E + E++ L +HP I
Sbjct: 11 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 70
Query: 62 VKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ G ++ + E C + +M + + +E ++ Q+ L+++H
Sbjct: 71 VKLLGAYYHDGKLWIMIEFCPGGAVDAIM---LELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 121 QGYFHRDLKPENLLVS-QGTIKIADFGL-AREIDAFPPYTERVGTRWYQAPEIL----FK 174
+ HRDLK N+L++ +G I++ADFG+ A+ + +GT ++ APE++ K
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
Y K D+W++G + E+ P + + KI PT+
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-DPPTL------------ 234
Query: 235 INYQFPQLSGVNLSALMPSA-SEDAINLIESLCSWDPCKRPTAAEALQHPF 284
L PS S + + ++ +P RP+AA+ L+HPF
Sbjct: 235 ---------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 270
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 75
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 76 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 132
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + T T +Y A
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 192
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y DMW++G IM LL P F Y + SP M +
Sbjct: 193 PEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 238
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 239 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 289
Query: 289 LYVP 292
VP
Sbjct: 290 TKVP 293
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 76
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 77 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 133
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + T T +Y A
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 193
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y DMW++G IM LL P F Y + SP M +
Sbjct: 194 PEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 239
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 240 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 290
Query: 289 LYVP 292
VP
Sbjct: 291 TKVP 294
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 39/291 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E + + +LG G+FG V++A NK +G + A K ++ E + E++ L +HP I
Sbjct: 19 EVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYI 78
Query: 62 VKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ G ++ + E C + +M + + +E ++ Q+ L+++H
Sbjct: 79 VKLLGAYYHDGKLWIMIEFCPGGAVDAIM---LELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 121 QGYFHRDLKPENLLVS-QGTIKIADFGL-AREIDAFPPYTERVGTRWYQAPEIL----FK 174
+ HRDLK N+L++ +G I++ADFG+ A+ + +GT ++ APE++ K
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
Y K D+W++G + E+ P + + KI PT+
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-DPPTL------------ 242
Query: 235 INYQFPQLSGVNLSALMPSA-SEDAINLIESLCSWDPCKRPTAAEALQHPF 284
L PS S + + ++ +P RP+AA+ L+HPF
Sbjct: 243 ---------------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPF 278
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 74
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 75 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 131
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + T T +Y A
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 191
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y DMW++G IM LL P F Y + SP M +
Sbjct: 192 PEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 237
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 238 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 288
Query: 289 LYVP 292
VP
Sbjct: 289 TKVP 292
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 125/240 (52%), Gaps = 12/240 (5%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L K+LG+G FG VW +S +V A+K LK + L E ++ L H +
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTMSVQAF-LEEANLMKTLQHDKL 70
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
V++ ++ + ++ + E M + +L +++ + + L + + + Q+ G+ Y+ +
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPK--LIDFSAQIAEGMAYIER 128
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKSG 176
+ Y HRDL+ N+LVS+ + KIADFGLAR I+ YT R G ++ + APE + G
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEAI-NFG 186
Query: 177 LYSSKVDMWAMGAIMAELLLFRPL-FQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
++ K D+W+ G ++ E++ + + + G AD M + P +++ D L M +
Sbjct: 187 CFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVENCPDELYDIMKM 246
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/304 (28%), Positives = 133/304 (43%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 69
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 70 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 126
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + T T +Y A
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 186
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y DMW++G IM LL P F Y + SP M +
Sbjct: 187 PEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 232
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 233 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 283
Query: 289 LYVP 292
VP
Sbjct: 284 TKVP 287
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 82
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 83 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 139
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 140 TFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 197
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 198 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNI 61
Y L K +G G+F V A + +G+ VA+K + K+ L REV+ ++ LNHPNI
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ E+I + ++ V E ++ + A E +A Q+ + Y HQ
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVA----HGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 121 QGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYS 179
+ HRDLK ENLL+ + IKIADFG + E G+ Y APE LF+ Y
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPE-LFQGKKYD 183
Query: 180 S-KVDMWAMGAIMAELL 195
+VD+W++G I+ L+
Sbjct: 184 GPEVDVWSLGVILYTLV 200
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K +G+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E M M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGD---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG IK+ADFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNI 61
Y L K +G G+F V A + +G VAIK + K+ L REV+ ++ LNHPNI
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNI 76
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ E+I + ++ + E ++ + A + E ++ Q+ + Y HQ
Sbjct: 77 VKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR----MKEKEARSKFRQIVSAVQYCHQ 132
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYS 179
+ HRDLK ENLL+ IKIADFG + E G Y APE LF+ Y
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPE-LFQGKKYD 191
Query: 180 S-KVDMWAMGAIMAELL 195
+VD+W++G I+ L+
Sbjct: 192 GPEVDVWSLGVILYTLV 208
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 129/292 (44%), Gaps = 33/292 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
++Y K +GSG+FG +K + E+VA+K +++ + ++ + RE+ R L HPNI
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQ-REIINHRSLRHPNI 78
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
V+ KE+I+ ++ + E LY+ + + FSE + + Q+ G+ Y H
Sbjct: 79 VRFKEVILTPTHLAIIMEYASGGELYERICNAGR----FSEDEARFFFQQLLSGVSYCHS 134
Query: 121 QGYFHRDLKPENLLVSQG---TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
HRDLK EN L+ +KI DFG ++ VGT Y APE+L +
Sbjct: 135 MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEY 194
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
D+W+ G + +L+ F+ +E K +++ +++ Y
Sbjct: 195 DGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKT---------------IQRILSVKY 239
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
P + S + +LI + DP R + E H +F + L
Sbjct: 240 SIPDDIRI---------SPECCHLISRIFVADPATRISIPEIKTHSWFLKNL 282
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNI 61
Y L K +G G+F V A + +G+ VA+K + K+ L REV+ + LNHPNI
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
VK+ E+I + ++ V E ++ + A + + E +A Q+ + Y HQ
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK----EKEARAKFRQIVSAVQYCHQ 131
Query: 121 QGYFHRDLKPENLLV-SQGTIKIADFGLARE------IDAF---PPYTERVGTRWYQAPE 170
+ HRDLK ENLL+ + IKIADFG + E +DAF PPY APE
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYA---------APE 182
Query: 171 ILFKSGLYSS-KVDMWAMGAIMAELL 195
LF+ Y +VD+W++G I+ L+
Sbjct: 183 -LFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K +G+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E M M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGD---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG IK+ADFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 143/312 (45%), Gaps = 39/312 (12%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKL-NHPNIVKVKELI 68
LG G+ V +N + + A+K ++K + REV+ L + H N++++ E
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 69 VEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHRDL 128
E+ + VFE M+ + + K++ F+E + V LD++H +G HRDL
Sbjct: 81 EEEDRFYLVFEKMRGGS---ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 129 KPENLLVSQ----GTIKIADFGLAREI----DAFPPYTERV----GTRWYQAPEIL---- 172
KPEN+L +KI DFGL I D P T + G+ Y APE++
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY---KICSVLGSPTMDSWADGL 229
++ +Y + D+W++G I+ LL P F G +D + + C + +S +G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG- 256
Query: 230 RQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
Y+FP ++S A +LI L D +R +AA+ LQHP+ + C
Sbjct: 257 ------KYEFPDKDWAHISCA-------AKDLISKLLVRDAKQRLSAAQVLQHPWVQGC- 302
Query: 290 YVPPHLRSTPAV 301
P + TP V
Sbjct: 303 -APENTLPTPMV 313
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK-KSYSREKCLNLREVKCLRKLNHPN 60
E ++ +K+G GSFG V++ ++ + +VVAIK + + E +E+ L + + P
Sbjct: 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 61 IVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ K ++ ++ + E + + L+E E+ + L ++ +GLDY+H
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 136
Query: 120 QQGYFHRDLKPENLLVSQ-GTIKIADFGLAREI-DAFPPYTERVGTRWYQAPEILFKSGL 177
+ HRD+K N+L+S+ G +K+ADFG+A ++ D VGT ++ APE++ K
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSA 195
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
Y SK D+W++G EL G P M + +
Sbjct: 196 YDSKADIWSLGITAIEL---------------------ARGEPPHSEL-----HPMKVLF 229
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
P+ N L + S+ +E+ + +P RPTA E L+H F R
Sbjct: 230 LIPK---NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 276
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 146/311 (46%), Gaps = 43/311 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+KY+ +K+G G+ G V+ A++ +G+ VAI+ + +K L + E+ +R+ +PNI
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 62 VKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
V + + ++ V E + +L ++ + E + A + + L+++H
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVV-----TETCMDEGQIAAVCRECLQALEFLHS 135
Query: 121 QGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTER---VGTRWYQAPEILFKSG 176
HR++K +N+L+ G++K+ DFG +I P ++R VGT ++ APE++ +
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQIT--PEQSKRSTMVGTPYWMAPEVVTRKA 193
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAIN 236
Y KVD+W++G + E++ P + + +Y I + G+P +
Sbjct: 194 -YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPEL-------------- 237
Query: 237 YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCLYVPPHLR 296
Q P+ LSA+ + + D KR +A E +QH F K P
Sbjct: 238 -QNPE----KLSAIFR-------DFLNRCLEMDVEKRGSAKELIQHQFLK---IAKPLSS 282
Query: 297 STPAVAATRRG 307
TP +AA +
Sbjct: 283 LTPLIAAAKEA 293
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 66 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 120
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 181 RREFHAEPVDVWSCGIVLTAML 202
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 66 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 120
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 181 RREFHAEPVDVWSCGIVLTAML 202
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 66 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 120
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 181 RREFHAEPVDVWSCGIVLTAML 202
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 66 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 120
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 181 RREFHAEPVDVWSCGIVLTAML 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK-KSYSREKCLNLREVKCLRKLNHPN 60
E ++ +K+G GSFG V++ ++ + +VVAIK + + E +E+ L + + P
Sbjct: 27 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 61 IVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ K ++ ++ + E + + L+E E+ + L ++ +GLDY+H
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 141
Query: 120 QQGYFHRDLKPENLLVSQ-GTIKIADFGLAREI-DAFPPYTERVGTRWYQAPEILFKSGL 177
+ HRD+K N+L+S+ G +K+ADFG+A ++ D VGT ++ APE++ K
Sbjct: 142 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSA 200
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
Y SK D+W++G EL G P M + +
Sbjct: 201 YDSKADIWSLGITAIEL---------------------ARGEPPHSEL-----HPMKVLF 234
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
P+ N L + S+ +E+ + +P RPTA E L+H F R
Sbjct: 235 LIPK---NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 281
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 143/306 (46%), Gaps = 59/306 (19%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVK-------CL 53
++ + + + LG+GSFG V ++H+G A+K LKK E + L++V+ L
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK----EIVVRLKQVEHTNDERLML 60
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
+ HP I+++ + +F + + ++ L+ L+ +K Q F K + +V
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL----RKSQRFPNPVAKFYAAEVC 116
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERV-GTRWYQAPE 170
L+Y+H + +RDLKPEN+L+ + G IKI DFG A+ + P T + GT Y APE
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV---PDVTYXLCGTPDYIAPE 173
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLL-FRPLFQGTDEADQMYKICSVLGSPTMDSWADGL 229
++ + Y+ +D W+ G ++ E+L + P + S TM ++ L
Sbjct: 174 VV-STKPYNKSIDWWSFGILIYEMLAGYTPFYD----------------SNTMKTYEKIL 216
Query: 230 RQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPF 284
+ +FP P +ED +L+ L + D +R + HP+
Sbjct: 217 NAEL----RFP-----------PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261
Query: 285 FKRCLY 290
FK ++
Sbjct: 262 FKEVVW 267
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 39/288 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK-KSYSREKCLNLREVKCLRKLNHPN 60
E ++ +++G GSFG V++ ++ + +VVAIK + + E +E+ L + +
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 61 IVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ K ++ ++ + E + + L+ A F E + L ++ +GLDY+H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP-----FDEFQIATMLKEILKGLDYLH 137
Query: 120 QQGYFHRDLKPENLLVS-QGTIKIADFGLAREI-DAFPPYTERVGTRWYQAPEILFKSGL 177
+ HRD+K N+L+S QG +K+ADFG+A ++ D VGT ++ APE++ +S
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA- 196
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
Y SK D+W++G EL P P D M + +
Sbjct: 197 YDSKADIWSLGITAIELAKGEP--------------------PNSD------MHPMRVLF 230
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
P+ N L+ ++ I++ + DP RPTA E L+H F
Sbjct: 231 LIPK---NNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK-KSYSREKCLNLREVKCLRKLNHPN 60
E ++ +K+G GSFG V++ ++ + +VVAIK + + E +E+ L + + P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 61 IVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ K ++ ++ + E + + L+E E+ + L ++ +GLDY+H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 121
Query: 120 QQGYFHRDLKPENLLVSQ-GTIKIADFGLAREI-DAFPPYTERVGTRWYQAPEILFKSGL 177
+ HRD+K N+L+S+ G +K+ADFG+A ++ D VGT ++ APE++ K
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVI-KQSA 180
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
Y SK D+W++G EL G P M + +
Sbjct: 181 YDSKADIWSLGITAIEL---------------------ARGEPPHSEL-----HPMKVLF 214
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
P+ N L + S+ +E+ + +P RPTA E L+H F R
Sbjct: 215 LIPK---NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 261
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 66 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 120
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 181 RREFHAEPVDVWSCGIVLTAML 202
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 23/236 (9%)
Query: 6 LTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK-SYSREKCLNLREVKCLRKLNHPNIVK- 63
L+ LG G+ V++ +K +G++ AIK S+ R + +RE + L+KLNH NIVK
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 64 --VKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
++E + V + C +LY ++E L ES L V G++++ +
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL-PESEFLIVLRDVVGGMNHLREN 131
Query: 122 GYFHRDLKPENLLV-----SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSG 176
G HR++KP N++ Q K+ DFG ARE++ + GT Y P++ ++
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAV 191
Query: 177 L-------YSSKVDMWAMGAIMAEL----LLFRPLFQGTDEADQMYKICSVLGSPT 221
L Y + VD+W++G L FRP + MYKI + G P+
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 66 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 120
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 181 RREFHAEPVDVWSCGIVLTAML 202
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 114/224 (50%), Gaps = 13/224 (5%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS--YSREKCLNLREVKCLRKLNHP 59
E Y + +G+GS+G + K G+++ K L EK + + EV LR+L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 60 NIVKVKELIVEKGN--VFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
NIV+ + I+++ N ++ V E C +L ++ +++Q E V + Q+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 117 YMHQQG-----YFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYT-ERVGTRWYQAP 169
H++ HRDLKP N+ + + +K+ DFGLAR ++ + E VGT +Y +P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSP 185
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKI 213
E + + Y+ K D+W++G ++ EL P F + + KI
Sbjct: 186 EQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 64 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 118
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 179 RREFHAEPVDVWSCGIVLTAML 200
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K +G A+K L K +K + L+++ + L
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 116
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 231
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 232 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 273
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENL++ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 ISKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 39/290 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK-KSYSREKCLNLREVKCLRKLNHPN 60
E ++ +K+G GSFG V++ ++ + +VVAIK + + E +E+ L + + P
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 61 IVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ K ++ ++ + E + + L+E E+ + L ++ +GLDY+H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLH 121
Query: 120 QQGYFHRDLKPENLLVSQ-GTIKIADFGLAREI-DAFPPYTERVGTRWYQAPEILFKSGL 177
+ HRD+K N+L+S+ G +K+ADFG+A ++ D VGT ++ APE++ K
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVI-KQSA 180
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
Y SK D+W++G EL G P M + +
Sbjct: 181 YDSKADIWSLGITAIEL---------------------ARGEPPHSEL-----HPMKVLF 214
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
P+ N L + S+ +E+ + +P RPTA E L+H F R
Sbjct: 215 LIPK---NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 261
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 113/236 (47%), Gaps = 23/236 (9%)
Query: 6 LTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK-SYSREKCLNLREVKCLRKLNHPNIVK- 63
L+ LG G+ V++ +K +G++ AIK S+ R + +RE + L+KLNH NIVK
Sbjct: 13 LSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKL 72
Query: 64 --VKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
++E + V + C +LY ++E L ES L V G++++ +
Sbjct: 73 FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGL-PESEFLIVLRDVVGGMNHLREN 131
Query: 122 GYFHRDLKPENLLV-----SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSG 176
G HR++KP N++ Q K+ DFG ARE++ + GT Y P++ ++
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAV 191
Query: 177 L-------YSSKVDMWAMGAIMAEL----LLFRPLFQGTDEADQMYKICSVLGSPT 221
L Y + VD+W++G L FRP + MYKI + G P+
Sbjct: 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI--ITGKPS 245
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K +G A+K L K +K + L+++ + L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ F+E + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFAEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K +G A+K L K +K + L+++ + L
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 88
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 89 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 145
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 203
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 204 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 245
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 22/206 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L KKLG+G FG VW A NKH+ VA+K +K + L E ++ L H
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAF-LAEANVMKTLQHDK 71
Query: 61 IVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQQ----LFSESAVKAWLFQVFRGL 115
+VK+ +V K ++ + E M + +L +++ + +Q L SA Q+ G+
Sbjct: 72 LVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA------QIAEGM 124
Query: 116 DYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ Q+ Y HRDL+ N+LVS + KIADFGLAR I+ YT R G ++ + APE
Sbjct: 125 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEA 183
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLF 197
+ G ++ K D+W+ G ++ E++ +
Sbjct: 184 I-NFGSFTIKSDVWSFGILLMEIVTY 208
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+E+ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKEIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENL++ QG IK+ DFGLA+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K +G A+K L K +K + L+++ + L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K +G A+K L K +K + L+++ + L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 111/206 (53%), Gaps = 22/206 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L KKLG+G FG VW A NKH+ VA+K +K + L E ++ L H
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAF-LAEANVMKTLQHDK 244
Query: 61 IVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQQ----LFSESAVKAWLFQVFRGL 115
+VK+ +V K ++ + E M + +L +++ + +Q L SA Q+ G+
Sbjct: 245 LVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA------QIAEGM 297
Query: 116 DYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ Q+ Y HRDL+ N+LVS + KIADFGLAR I+ YT R G ++ + APE
Sbjct: 298 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIED-NEYTAREGAKFPIKWTAPEA 356
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLF 197
+ G ++ K D+W+ G ++ E++ +
Sbjct: 357 I-NFGSFTIKSDVWSFGILLMEIVTY 381
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ ++ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYQMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K +G A+K L K +K + L+++ + L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E M + ++ FSE + + Q+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENL++ QG IK+ DFG A+ + GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%), Gaps = 13/224 (5%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS--YSREKCLNLREVKCLRKLNHP 59
E Y + +G+GS+G + K G+++ K L EK + + EV LR+L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 60 NIVKVKELIVEKGN--VFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
NIV+ + I+++ N ++ V E C +L ++ +++Q E V + Q+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 117 YMHQQG-----YFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTER-VGTRWYQAP 169
H++ HRDLKP N+ + + +K+ DFGLAR ++ + + VGT +Y +P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSP 185
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKI 213
E + + Y+ K D+W++G ++ EL P F + + KI
Sbjct: 186 EQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 116
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ F E + + Q+
Sbjct: 117 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVL 173
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 231
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 232 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 273
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%), Gaps = 13/224 (5%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS--YSREKCLNLREVKCLRKLNHP 59
E Y + +G+GS+G + K G+++ K L EK + + EV LR+L HP
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65
Query: 60 NIVKVKELIVEKGN--VFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
NIV+ + I+++ N ++ V E C +L ++ +++Q E V + Q+ L
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 117 YMHQQG-----YFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTER-VGTRWYQAP 169
H++ HRDLKP N+ + + +K+ DFGLAR ++ + + VGT +Y +P
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP 185
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKI 213
E + + Y+ K D+W++G ++ EL P F + + KI
Sbjct: 186 EQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 228
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ F E + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 134/300 (44%), Gaps = 50/300 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY-----SREKCLNLREVKCLRK 55
++ + + LG GSFG V A K +G++ A+K LKK E + + + L +
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR 81
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
NHP + ++ +FFV E + N LM QK + F E+ + + ++ L
Sbjct: 82 -NHPFLTQLFCCFQTPDRLFFVMEFV--NGGDLM-FHIQKSRRFDEARARFYAAEIISAL 137
Query: 116 DYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
++H +G +RDLK +N+L+ +G K+ADFG+ +E I GT Y APEIL
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEIL- 196
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
+ LY VD WAMG ++ E+L F+ +E D I
Sbjct: 197 QEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI-------------------- 236
Query: 234 AINYQFPQLSGVNLSALMPS-ASEDAINLIESLCSWDPCKRPTAAE------ALQHPFFK 286
+N + P+ EDA +++S + +P R + L+HPFFK
Sbjct: 237 -----------LNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFK 285
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 115/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K +G+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG IK+ADFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ F E + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ F E + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+ + +LG G+FG V++A NK + + A K + E + E+ L +HPNIVK
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 64 VKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ + + N++ + E C + +M + ++ +ES ++ Q L+Y+H
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 123 YFHRDLKPENLLVS-QGTIKIADFGL-AREIDAFPPYTERVGTRWYQAPEILF----KSG 176
HRDLK N+L + G IK+ADFG+ A+ +GT ++ APE++ K
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 177 LYSSKVDMWAMGAIMAELLLFRP 199
Y K D+W++G + E+ P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEP 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 90
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ F E + + Q+
Sbjct: 91 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFXEPHARFYAAQIVL 147
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 148 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 205
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 206 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 247
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 108/239 (45%), Gaps = 40/239 (16%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHP---------- 59
LG G+FG V +A N AIK ++ + + + L EV L LNH
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTI-LSEVXLLASLNHQYVVRYYAAWL 72
Query: 60 ---NIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAW-LF-QVFR 113
N VK + +K +F E C LY L+ ++ QQ + W LF Q+
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ-----RDEYWRLFRQILE 127
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREID---------------AFPPY 157
L Y+H QG HR+LKP N+ + + +KI DFGLA+ + +
Sbjct: 128 ALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNL 187
Query: 158 TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSV 216
T +GT Y A E+L +G Y+ K+D +++G I E + P G + + + K+ SV
Sbjct: 188 TSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY--PFSTGXERVNILKKLRSV 244
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 41/291 (14%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN---LREVKCLRKLN 57
++ + + + LG G FG V+ A K S +VA+K L KS ++ + RE++ L+
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH 81
Query: 58 HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
HPNI+++ ++ ++ + E + LY+ + QK F E + ++ L
Sbjct: 82 HPNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALM 137
Query: 117 YMHQQGYFHRDLKPEN-LLVSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKS 175
Y H + HRD+KPEN LL +G +KIADFG + + T GT Y PE++ +
Sbjct: 138 YCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKT-MCGTLDYLPPEMI-EG 195
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAI 235
+++ KVD+W +G + ELL+ P F+ S + R+ + +
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPPFESA-------------------SHNETYRRIVKV 236
Query: 236 NYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
+ +FP A +P+ ++D LI L +P +R A+ HP+ +
Sbjct: 237 DLKFP--------ASVPTGAQD---LISKLLRHNPSERLPLAQVSAHPWVR 276
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+ + +LG G+FG V++A NK + + A K + E + E+ L +HPNIVK
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 64 VKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ + + N++ + E C + +M + ++ +ES ++ Q L+Y+H
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 123 YFHRDLKPENLLVS-QGTIKIADFGL-AREIDAFPPYTERVGTRWYQAPEILF----KSG 176
HRDLK N+L + G IK+ADFG+ A+ +GT ++ APE++ K
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDR 215
Query: 177 LYSSKVDMWAMGAIMAELLLFRP 199
Y K D+W++G + E+ P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEP 238
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 110/197 (55%), Gaps = 11/197 (5%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNIV 62
++ +K+G+GSFG V +A + G VA+K L + + +N LREV +++L HPNIV
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 63 KVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
+ + N+ V E + + +LY+L+ ++QL E + + V +G++Y+H +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL-DERRRLSMAYDVAKGMNYLHNR 156
Query: 122 G--YFHRDLKPENLLVSQG-TIKIADFGLAR-EIDAFPPYTERVGTRWYQAPEILFKSGL 177
HRDLK NLLV + T+K+ DFGL+R + F GT + APE+L +
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVL-RDEP 215
Query: 178 YSSKVDMWAMGAIMAEL 194
+ K D+++ G I+ EL
Sbjct: 216 SNEKSDVYSFGVILWEL 232
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y AP I+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPAII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ + LG+GSFG V +K +G A+K L K +K + L+++ +
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIQ 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E M + ++ FSE + + Q+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG IK+ADFG A+ + GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG--RTWXLCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 39/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS-YSREKCLNL----REVKCLRKLNH 58
Y L + +G G F V + +N+ +G+ A+K + + ++ L+ RE L H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
P+IV++ E G ++ VFE M +L + + ++SE+ ++ Q+ L Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 118 MHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREI-DAFPPYTERVGTRWYQAPEIL 172
H HRD+KP +L++ +K+ FG+A ++ ++ RVGT + APE++
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 207
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
K Y VD+W G I+ LL F GT E ++++ + G M+ RQ
Sbjct: 208 -KREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFEGI-IKGKYKMNP-----RQW 258
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
I SE A +L+ + DP +R T EAL HP+ K
Sbjct: 259 SHI-------------------SESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+ + +LG G+FG V++A NK + + A K + E + E+ L +HPNIVK
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVK 98
Query: 64 VKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ + + N++ + E C + +M + ++ +ES ++ Q L+Y+H
Sbjct: 99 LLDAFYYENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 123 YFHRDLKPENLLVS-QGTIKIADFGL-AREIDAFPPYTERVGTRWYQAPEILF----KSG 176
HRDLK N+L + G IK+ADFG+ A+ +GT ++ APE++ K
Sbjct: 156 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDR 215
Query: 177 LYSSKVDMWAMGAIMAELLLFRP 199
Y K D+W++G + E+ P
Sbjct: 216 PYDYKADVWSLGITLIEMAEIEP 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+E+ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKEIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENL++ QG I++ DFGLA+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 142/326 (43%), Gaps = 69/326 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 90 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 196
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 197 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 240
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 241 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 284
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVAA 303
HPFF+ + H ++ P + A
Sbjct: 285 PLKAHPFFESVTWENLHQQTPPKLTA 310
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 134/294 (45%), Gaps = 39/294 (13%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS-YSREKCLNL----REVKCLRKLNH 58
Y L + +G G F V + +N+ +G+ A+K + + ++ L+ RE L H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
P+IV++ E G ++ VFE M +L + + ++SE+ ++ Q+ L Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 118 MHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREI-DAFPPYTERVGTRWYQAPEIL 172
H HRD+KP +L++ +K+ FG+A ++ ++ RVGT + APE++
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
K Y VD+W G I+ LL F GT E ++++ + G M+ RQ
Sbjct: 206 -KREPYGKPVDVWGCGVILFILLSGCLPFYGTKE--RLFE-GIIKGKYKMNP-----RQW 256
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
I SE A +L+ + DP +R T EAL HP+ K
Sbjct: 257 SHI-------------------SESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 142/326 (43%), Gaps = 69/326 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 90 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANAFVGTA 196
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 197 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 240
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 241 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 284
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVAA 303
HPFF+ + H ++ P + A
Sbjct: 285 PLKAHPFFESVTWENLHQQTPPKLTA 310
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 139/325 (42%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 92 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 198
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E KI
Sbjct: 199 QYVSPELLTEKSAXKSS--DLWALGCIIYQLVAGLPPFRAGNEGLIFAKI---------- 246
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
+ + Y FP+ P A +L+E L D KR E
Sbjct: 247 ---------IKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 286
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 287 PLKAHPFFESVTWENLHQQTPPKLT 311
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 106/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G+ G V AVN+ + E VA+K + + + N+++ C+ K LNH
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K +G A+K L K +K + L+++ + L
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 88
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ F E + + Q+
Sbjct: 89 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVL 145
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 146 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 203
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 204 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 245
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 142/325 (43%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 95 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 144
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 145 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 201
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 202 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 245
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP +A P A +L+E L D KR E
Sbjct: 246 -----FQKIIKLEYDFP-------AAFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 289
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 290 PLKAHPFFESVTWENLHQQTPPKLT 314
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 43/296 (14%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHS---GEVVAIKALKKSYSREKCLNLR-EVKCLRKLNH 58
KY + LG GS+G V + ++ + V +K K N++ E++ LR+L H
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65
Query: 59 PNIVKVKELIV--EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
N++++ +++ EK ++ V E C + +++++ +K+ F + Q+ GL+
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR--FPVCQAHGYFCQLIDGLE 123
Query: 117 YMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPP-YTERV--GTRWYQAPEIL 172
Y+H QG H+D+KP NLL++ GT+KI+ G+A + F T R G+ +Q PEI
Sbjct: 124 YLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIA 183
Query: 173 FKSGLYSS-KVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
+S KVD+W+ G + + F+G D +YK+ +G +
Sbjct: 184 NGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG----DNIYKLFENIGKGS---------- 229
Query: 232 AMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
Y P G LS +L++ + ++P KR + + QH +F++
Sbjct: 230 -----YAIPGDCGPPLS-----------DLLKGMLEYEPAKRFSIRQIRQHSWFRK 269
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-LNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N+++ C+ LNH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 66 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 120
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 181 RREFHAEPVDVWSCGIVLTAML 202
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 81
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 82 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 138
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + +T GT Y APEI+
Sbjct: 139 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWT-LCGTPEYLAPEII 196
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 197 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 238
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 142/312 (45%), Gaps = 39/312 (12%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKL-NHPNIVKVKELI 68
LG G+ V +N + + A+K ++K + REV+ L + H N++++ E
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF 80
Query: 69 VEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHRDL 128
E+ + VFE M+ + + K++ F+E + V LD++H +G HRDL
Sbjct: 81 EEEDRFYLVFEKMRGGS---ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 129 KPENLLVSQ----GTIKIADFGLAREI----DAFPPYTERV----GTRWYQAPEIL---- 172
KPEN+L +KI DF L I D P T + G+ Y APE++
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY---KICSVLGSPTMDSWADGL 229
++ +Y + D+W++G I+ LL P F G +D + + C + +S +G
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG- 256
Query: 230 RQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
Y+FP ++S A +LI L D +R +AA+ LQHP+ + C
Sbjct: 257 ------KYEFPDKDWAHISCA-------AKDLISKLLVRDAKQRLSAAQVLQHPWVQGC- 302
Query: 290 YVPPHLRSTPAV 301
P + TP V
Sbjct: 303 -APENTLPTPMV 313
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 110/197 (55%), Gaps = 11/197 (5%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPNIV 62
++ +K+G+GSFG V +A + G VA+K L + + +N LREV +++L HPNIV
Sbjct: 40 NIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 63 KVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
+ + N+ V E + + +LY+L+ ++QL E + + V +G++Y+H +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL-DERRRLSMAYDVAKGMNYLHNR 156
Query: 122 G--YFHRDLKPENLLVSQG-TIKIADFGLAR-EIDAFPPYTERVGTRWYQAPEILFKSGL 177
HR+LK NLLV + T+K+ DFGL+R + F GT + APE+L +
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVL-RDEP 215
Query: 178 YSSKVDMWAMGAIMAEL 194
+ K D+++ G I+ EL
Sbjct: 216 SNEKSDVYSFGVILWEL 232
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 142/326 (43%), Gaps = 69/326 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 89 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 139 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 195
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 196 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 239
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 240 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 283
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVAA 303
HPFF+ + H ++ P + A
Sbjct: 284 PLKAHPFFESVTWENLHQQTPPKLTA 309
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 142/326 (43%), Gaps = 69/326 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 89 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 139 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANSFVGTA 195
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 196 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 239
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 240 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 283
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVAA 303
HPFF+ + H ++ P + A
Sbjct: 284 PLKAHPFFESVTWENLHQQTPPKLTA 309
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + +T GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-RTWT-LCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 139/325 (42%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 92 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 198
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E KI
Sbjct: 199 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNEGLIFAKI---------- 246
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
+ + Y FP+ P A +L+E L D KR E
Sbjct: 247 ---------IKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 286
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 287 PLKAHPFFESVTWENLHQQTPPKLT 311
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N++ E+ + LNH
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 66 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 120
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 181 RREFHAEPVDVWSCGIVLTAML 202
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N++ E+ + LNH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 12/202 (5%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHP 59
+E + L + LG G++G V AVN+ + E VA+K + + + N++ E+ + LNH
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 60 NIVKVKELIVEKGNVFFVF--ECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
N+VK E GN+ ++F C L+ +E E + + Q+ G+ Y
Sbjct: 65 NVVKFYGHRRE-GNIQYLFLEYCSGGELFDRIEPDIG----MPEPDAQRFFHQLMAGVVY 119
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF 173
+H G HRD+KPENLL+ + +KI+DFGLA R + + GT Y APE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 174 KSGLYSSKVDMWAMGAIMAELL 195
+ ++ VD+W+ G ++ +L
Sbjct: 180 RREFHAEPVDVWSCGIVLTAML 201
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V +K SG A+K L K +K + L+++ + L
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEALAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 114/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENL++ QG IK+ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 17/225 (7%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY----SREKCLNLREVKCLRKLNHP 59
+ K +G GSFG V A +K A+K L+K EK + L+ + HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 60 NIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+V + ++FV + + Y L Q+++ F E + + ++ L Y
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHL-----QRERCFLEPRARFYAAEIASALGY 154
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILFKS 175
+H +RDLKPEN+L+ SQG I + DFGL +E I+ + GT Y APE+L K
Sbjct: 155 LHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ 214
Query: 176 GLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSP 220
Y VD W +GA++ E+L P F + A +MY ++L P
Sbjct: 215 P-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYD--NILNKP 255
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 92 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 198
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 199 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 242
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 243 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 286
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 287 PLKAHPFFESVTWENLHQQTPPKLT 311
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 93 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 143 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 199
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 200 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 243
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 244 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 287
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 288 PLKAHPFFESVTWENLHQQTPPKLT 312
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 92 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 198
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 199 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 242
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 243 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 286
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 287 PLKAHPFFESVTWENLHQQTPPKLT 311
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 139/324 (42%), Gaps = 67/324 (20%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 92 PFFVKL----------YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI 141
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANSFVGTA 198
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS 224
Y +PE+L + S D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 199 QYVSPELLTEKSA-SKSSDLWALGCIIYQLVAGLPPFRAGNE----YLI----------- 242
Query: 225 WADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA----- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 243 ----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYGP 287
Query: 280 -LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 288 LKAHPFFESVTWENLHQQTPPKLT 311
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 90 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 196
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 197 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 240
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 241 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 284
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 285 PLKAHPFFESVTWENLHQQTPPKLT 309
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 93 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 142
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 143 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANSFVGTA 199
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 200 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 243
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 244 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 287
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 288 PLKAHPFFESVTWENLHQQTPPKLT 312
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 92 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 142 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 198
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 199 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 242
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 243 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 286
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 287 PLKAHPFFESVTWENLHQQTPPKLT 311
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 126/285 (44%), Gaps = 36/285 (12%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKALKKSYS--REKCLNLREVKCLRKLNHPNIVKVKE 66
+LG G++G V + + SG+++A+K ++ + + +K L + +R ++ P V
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ-GYFH 125
+ +G+V+ E M +L + + K Q E + + + L+++H + H
Sbjct: 118 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 177
Query: 126 RDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL---FKSGLYSSK 181
RD+KP N+L++ G +K+ DFG++ + T G + Y APE + YS K
Sbjct: 178 RDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVK 237
Query: 182 VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ-AMAINYQFP 240
D+W++G M EL + R + DSW +Q + P
Sbjct: 238 SDIWSLGITMIELAILRFPY---------------------DSWGTPFQQLKQVVEEPSP 276
Query: 241 QLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
QL SA + ++ + +RPT E +QHPFF
Sbjct: 277 QLPADKFSA-------EFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 139/325 (42%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 67 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 116
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 117 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 173
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E KI
Sbjct: 174 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNEYLIFQKI---------- 221
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
+ + Y FP+ P A +L+E L D KR E
Sbjct: 222 ---------IKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 261
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 262 PLKAHPFFESVTWENLHQQTPPKLT 286
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHPNIV 62
+ LG G FG C + ++GE VA+K+LK +L+ E++ LR L H NIV
Sbjct: 27 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 86
Query: 63 KVKELIVEKGN--VFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
K K + E G + + E + +L + + K K L + + Q+ +G+DY+
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK---YAVQICKGMDYLG 143
Query: 120 QQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR-----WYQAPEILF 173
+ Y HRDL N+LV S+ +KI DFGL + I+ R WY APE L
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLM 202
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF 197
+S Y + D+W+ G + ELL +
Sbjct: 203 QSKFYIAS-DVWSFGVTLHELLTY 225
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 141/326 (43%), Gaps = 71/326 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 70 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 119
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 120 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 176
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E KI
Sbjct: 177 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNEYLIFQKI---------- 224
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ-- 281
+ + Y FP+ P A +L+E L D KR E ++
Sbjct: 225 ---------IKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKR-LGCEEMEGY 263
Query: 282 -----HPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 264 GPLKAHPFFESVTWENLHQQTPPKLT 289
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 97 PFFVKL----------YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 146
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 147 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 203
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 204 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 247
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 248 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 291
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 292 PLKAHPFFESVTWENLHQQTPPKLT 316
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 105/206 (50%), Gaps = 15/206 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKC---------LNLREVKC 52
+KYS LGSG+FG VW AV+K + V +K +KK E C + L E+
Sbjct: 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL-EIAI 82
Query: 53 LRKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLF-QV 111
L ++ H NI+KV ++ +G V E L L + +L + + +++F Q+
Sbjct: 83 LSRVEHANIIKVLDIFENQGFFQLVMEKHGSGL-DLFAFIDRHPRL--DEPLASYIFRQL 139
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRWYQAPE 170
+ Y+ + HRD+K EN+++++ TIK+ DFG A ++ + GT Y APE
Sbjct: 140 VSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPE 199
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLL 196
+L + +++MW++G + L+
Sbjct: 200 VLMGNPYRGPELEMWSLGVTLYTLVF 225
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 139/324 (42%), Gaps = 69/324 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 68 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 117
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 174
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E KI
Sbjct: 175 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNEYLIFQKI---------- 222
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
+ + Y FP+ P A +L+E L D KR E
Sbjct: 223 ---------IKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 262
Query: 280 --LQHPFFKRCLYVPPHLRSTPAV 301
HPFF+ + H ++ P +
Sbjct: 263 PLKAHPFFESVTWENLHQQTPPKL 286
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHPNIV 62
+ LG G FG C + ++GE VA+K+LK +L+ E++ LR L H NIV
Sbjct: 15 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIV 74
Query: 63 KVKELIVEKGN--VFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
K K + E G + + E + +L + + K K L + + Q+ +G+DY+
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK---YAVQICKGMDYLG 131
Query: 120 QQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR-----WYQAPEILF 173
+ Y HRDL N+LV S+ +KI DFGL + I+ R WY APE L
Sbjct: 132 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLM 190
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF 197
+S Y + D+W+ G + ELL +
Sbjct: 191 QSKFYIAS-DVWSFGVTLHELLTY 213
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 138/322 (42%), Gaps = 69/322 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 69 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 118
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 119 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 175
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E KI
Sbjct: 176 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNEYLIFQKI---------- 223
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
+ + Y FP+ P A +L+E L D KR E
Sbjct: 224 ---------IKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 263
Query: 280 --LQHPFFKRCLYVPPHLRSTP 299
HPFF+ + H ++ P
Sbjct: 264 PLKAHPFFESVTWENLHQQTPP 285
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 141/324 (43%), Gaps = 69/324 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF V A + AIK L+K + + RE + +L+H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 74 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 123
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 124 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 180
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 181 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 224
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 225 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 268
Query: 280 --LQHPFFKRCLYVPPHLRSTPAV 301
HPFF+ + H ++ P +
Sbjct: 269 PLKAHPFFESVTWENLHQQTPPKL 292
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 129/293 (44%), Gaps = 52/293 (17%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKALKKSYS--REKCLNLREVKCLRKLNHPNIVKVKE 66
+LG G++G V + + SG+++A+K ++ + + +K L + +R ++ P V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ-GYFH 125
+ +G+V+ E M +L + + K Q E + + + L+++H + H
Sbjct: 74 ALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 133
Query: 126 RDLKPENLLVSQ-GTIKIADFGL--------AREIDAFPPYTERVGTRWYQAPEIL---F 173
RD+KP N+L++ G +K+ DFG+ A++IDA G + Y APE +
Sbjct: 134 RDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA--------GCKPYMAPERINPEL 185
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ-A 232
YS K D+W++G M EL + R + DSW +Q
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFPY---------------------DSWGTPFQQLK 224
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ PQL SA + ++ + +RPT E +QHPFF
Sbjct: 225 QVVEEPSPQLPADKFSA-------EFVDFTSQCLKKNSKERPTYPELMQHPFF 270
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E M + ++ FSE + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENL++ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 140/302 (46%), Gaps = 53/302 (17%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE----KCLNLREVKCLRKL 56
+ ++ LG GSFG V A K + E+ AIK LKK + +C + E + L L
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVEC-TMVEKRVLALL 76
Query: 57 NHPN-IVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ P + ++ ++FV E + +Y + + K F E + ++
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK-----FKEPQAVFYAAEISI 131
Query: 114 GLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLARE--IDAFPPYTERVGTRWYQAPE 170
GL ++H++G +RDLK +N+++ S+G IKIADFG+ +E +D E GT Y APE
Sbjct: 132 GLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTT-REFCGTPDYIAPE 190
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLR 230
I+ Y VD WA G ++ E+L +P F G DE D++++
Sbjct: 191 IIAYQP-YGKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQ------------------ 230
Query: 231 QAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAA-----EALQHPFF 285
M N +P+ S S++A+++ + L + P KR + +H FF
Sbjct: 231 SIMEHNVSYPK-----------SLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFF 279
Query: 286 KR 287
+R
Sbjct: 280 RR 281
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ F E + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ F E + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P + K++ + N++ V E M + ++ FSE + + Q+
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENL++ QG IK+ DFG A+ + GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P + K++ + N++ V E M + ++ FSE + + Q+
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENL++ QG IK+ DFG A+ + GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E + M + ++ F E + + Q+
Sbjct: 97 QAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGE---MFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENLL+ QG I++ DFG A+ + GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 26/203 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L KKLG+G FG VW A NKH+ VA+K +K + L E ++ L H
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTK--VAVKTMKPGSMSVEAF-LAEANVMKTLQHDK 238
Query: 61 IVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQQ----LFSESAVKAWLFQVFRGL 115
+VK+ +V K ++ + E M + +L +++ + +Q L SA Q+ G+
Sbjct: 239 LVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSA------QIAEGM 291
Query: 116 DYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
++ Q+ Y HRDL+ N+LVS + KIADFGLAR FP +W APE +
Sbjct: 292 AFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFP-------IKW-TAPEAI-N 342
Query: 175 SGLYSSKVDMWAMGAIMAELLLF 197
G ++ K D+W+ G ++ E++ +
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTY 365
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 112/224 (50%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 95
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P +VK++ + N++ V E M + ++ F E + + Q+
Sbjct: 96 QAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENL++ QG IK+ DFG A+ + GT Y APEI+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 210
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 211 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 252
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 110/218 (50%), Gaps = 40/218 (18%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIV------- 62
+GSG FG V++A ++ G+ I+ +K Y+ EK REVK L KL+H NIV
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVK--YNNEKAE--REVKALAKLDHVNIVHYNGCWD 75
Query: 63 ------KVKELIVEKGN----------------VFFVFE-CMQCNLYQLMEAKKQKQQLF 99
+ + +E + +F E C + L Q +E K++ ++L
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIE-KRRGEKL- 133
Query: 100 SESAVKAWLF-QVFRGLDYMHQQGYFHRDLKPENL-LVSQGTIKIADFGLAREIDAFPPY 157
+ + LF Q+ +G+DY+H + HRDLKP N+ LV +KI DFGL +
Sbjct: 134 -DKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 192
Query: 158 TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
T GT Y +PE + S Y +VD++A+G I+AELL
Sbjct: 193 TRSKGTLRYMSPEQI-SSQDYGKEVDLYALGLILAELL 229
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 120/244 (49%), Gaps = 27/244 (11%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEV---VAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
++ + +G+G FG V K G+ VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 25 TIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 84
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I+ ++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 85 IIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ--FTVIQLVGMLRGISAGMKYLSD 142
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGL+R ++ P YT R G RW I F+
Sbjct: 143 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKICSVLGSPT------ 221
++S D+W+ G +M E++ + RP ++ T++ ++ Y++ S + P
Sbjct: 203 K--FTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDCPAALYQLM 260
Query: 222 MDSW 225
+D W
Sbjct: 261 LDCW 264
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 140/325 (43%), Gaps = 69/325 (21%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E + K LG GSF A + AIK L+K + + RE + +L+H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKK-------QKQQLFSESAVKAWLFQV 111
P VK+ +F F+ + + L AK +K F E+ + + ++
Sbjct: 90 PFFVKL----------YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTER------VGTR 164
L+Y+H +G HRDLKPEN+L+++ I+I DFG A+ P +++ VGT
Sbjct: 140 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK---VLSPESKQARANXFVGTA 196
Query: 165 WYQAPEILF-KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y +PE+L KS SS D+WA+G I+ +L+ P F+ +E Y I
Sbjct: 197 QYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFRAGNE----YLI---------- 240
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA---- 279
++ + + Y FP+ P A +L+E L D KR E
Sbjct: 241 -----FQKIIKLEYDFPE-------KFFPKAR----DLVEKLLVLDATKRLGCEEMEGYG 284
Query: 280 --LQHPFFKRCLYVPPHLRSTPAVA 302
HPFF+ + H ++ P +
Sbjct: 285 PLKAHPFFESVTWENLHQQTPPKLT 309
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 106/206 (51%), Gaps = 29/206 (14%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKV----- 64
+GSG FG V++A ++ G+ IK +K Y+ EK REVK L KL+H NIV
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVK--YNNEKAE--REVKALAKLDHVNIVHYNGCWD 74
Query: 65 ----------KELIVEKGNVFFV---FECMQCNLYQLMEAKKQKQQLFSESAVKAWLF-Q 110
K K F+ F C + L Q +E K++ ++L + + LF Q
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEF-CDKGTLEQWIE-KRRGEKL--DKVLALELFEQ 130
Query: 111 VFRGLDYMHQQGYFHRDLKPENL-LVSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAP 169
+ +G+DY+H + +RDLKP N+ LV +KI DFGL + GT Y +P
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSP 190
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELL 195
E + S Y +VD++A+G I+AELL
Sbjct: 191 EQI-SSQDYGKEVDLYALGLILAELL 215
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 116/228 (50%), Gaps = 38/228 (16%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEV-VAIKALK-KSYSREKCLNLREVKCLRK 55
E K LGSG+FG V A ++K + VA+K LK K+ S E+ + E+K + +
Sbjct: 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQ 104
Query: 56 L-NHPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVK-------- 105
L +H NIV + G ++ +FE C +L + +K++K FSE ++
Sbjct: 105 LGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREK---FSEDEIEYENQKRLE 161
Query: 106 --------------AWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLARE 150
+ +QV +G++++ + HRDL N+LV+ G +KI DFGLAR+
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD 221
Query: 151 IDAFPPYTERVGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
I + Y R R + APE LF+ G+Y+ K D+W+ G ++ E+
Sbjct: 222 IMSDSNYVVRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIF 268
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M ++ K LG G+FG V K +G A+K LKK E L E + L+
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++FSE + + ++ L
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSAL 123
Query: 116 DYMH-QQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEIL 172
DY+H ++ +RDLK ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 124 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 183
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ Y VD W +G +M E++ R F D ++++++
Sbjct: 184 -EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELI------------------ 223
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+ +FP+ G +A +L+ L DP +R A E +QH FF
Sbjct: 224 LMEEIRFPRTLG-----------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M ++ K LG G+FG V K +G A+K LKK E L E + L+
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++FSE + + ++ L
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSAL 121
Query: 116 DYMH-QQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEIL 172
DY+H ++ +RDLK ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 122 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 181
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ Y VD W +G +M E++ R F D ++++++
Sbjct: 182 -EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELI------------------ 221
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+ +FP+ G +A +L+ L DP +R A E +QH FF
Sbjct: 222 LMEEIRFPRTLG-----------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M ++ K LG G+FG V K +G A+K LKK E L E + L+
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++FSE + + ++ L
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSAL 122
Query: 116 DYMH-QQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEIL 172
DY+H ++ +RDLK ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 123 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL 182
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ Y VD W +G +M E++ R F D ++++++
Sbjct: 183 -EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELI------------------ 222
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+ +FP+ G +A +L+ L DP +R A E +QH FF
Sbjct: 223 LMEEIRFPRTLG-----------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREV-------KCL 53
++++ K LG+GSFG V + +G A+K L K +K + L+++ + L
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKQIEHTLNEKRIL 96
Query: 54 RKLNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ +N P + K++ + N++ V E M + ++ F E + + Q+
Sbjct: 97 QAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGE---MFSHLRRIGRFXEPHARFYAAQIVL 153
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEIL 172
+Y+H +RDLKPENL++ QG IK+ DFG A+ + GT Y APEI+
Sbjct: 154 TFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG--RTWXLCGTPEYLAPEII 211
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMY-KICS 215
G Y+ VD WA+G ++ E+ P F D+ Q+Y KI S
Sbjct: 212 LSKG-YNKAVDWWALGVLIYEMAAGYPPF-FADQPIQIYEKIVS 253
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 21/235 (8%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEV---VAIKALKKSYS-REKCLNLREVKCLRKLNH 58
+ + K +GSG G V + G+ VAIKALK Y+ R++ L E + + +H
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNI++++ ++ V E M+ Q F+ + L V G+ Y+
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ--FTIMQLVGMLRGVGAGMRYL 167
Query: 119 HQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEIL 172
GY HRDL N+LV + K++DFGL+R ++ P YT G RW I
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKICSVLGSP 220
F++ +SS D+W+ G +M E+L + RP + T+ ++ Y++ + +G P
Sbjct: 228 FRT--FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCP 280
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M ++ K LG G+FG V K +G A+K LKK E L E + L+
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++FSE + + ++ L
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSAL 261
Query: 116 DYMH-QQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEIL 172
DY+H ++ +RDLK ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 321
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ Y VD W +G +M E++ R F D ++++++
Sbjct: 322 -EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELI------------------ 361
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+ +FP+ G +A +L+ L DP +R A E +QH FF
Sbjct: 362 LMEEIRFPRTLG-----------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 127/295 (43%), Gaps = 47/295 (15%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL-------REVKCLRKL 56
Y L LG G+FG V ++ +G VA+K L +R+K +L RE++ L+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKIL----NRQKIRSLDVVGKIKREIQNLKLF 68
Query: 57 NHPNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP+I+K+ ++I + F V E + L+ + K E + Q+ +
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAV 124
Query: 116 DYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
DY H+ HRDLKPEN+L+ + KIADFGL+ + + G+ Y APE++
Sbjct: 125 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISG 184
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
+VD+W+ G I+ LL C L P D L
Sbjct: 185 RLYAGPEVDIWSCGVILYALL------------------CGTL--PFDDEHVPTL----- 219
Query: 235 INYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
F ++ G + + + L+ + DP KR T + +H +FK+ L
Sbjct: 220 ----FKKIRG-GVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 49/298 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M ++ K LG G+FG V K +G A+K LKK E L E + L+
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++FSE + + ++ L
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHL-----SRERVFSEDRARFYGAEIVSAL 264
Query: 116 DYMH-QQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEIL 172
DY+H ++ +RDLK ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 265 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL 324
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ Y VD W +G +M E++ R F D ++++++
Sbjct: 325 -EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-EKLFELI------------------ 364
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+ +FP+ G +A +L+ L DP +R A E +QH FF
Sbjct: 365 LMEEIRFPRTLG-----------PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 132/312 (42%), Gaps = 62/312 (19%)
Query: 2 EKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH-- 58
+ Y L+K+ LG G G V + ++ +G+ A+K L S K ++++H
Sbjct: 9 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----------PKARQEVDHHW 57
Query: 59 -----PNIVKVKELIVE----KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLF 109
P+IV + ++ K + + ECM+ +++ Q F+E +
Sbjct: 58 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGEL-FSRIQERGDQAFTEREAAEIMR 116
Query: 110 QVFRGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDA----FPPYTERV 161
+ + ++H HRD+KPENLL + +K+ DFG A+E P YT
Sbjct: 117 DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTP-- 174
Query: 162 GTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLL-FRPLFQGTDEADQMYKICSVLGSP 220
+Y APE+L Y DMW++G IM LL F P + T +A SP
Sbjct: 175 ---YYVAPEVLGPEK-YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI----------SP 220
Query: 221 TMDSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEAL 280
M R+ Y FP + SEDA LI L DP +R T + +
Sbjct: 221 GMK------RRIRLGQYGFP-------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFM 267
Query: 281 QHPFFKRCLYVP 292
HP+ + + VP
Sbjct: 268 NHPWINQSMVVP 279
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 132/312 (42%), Gaps = 62/312 (19%)
Query: 2 EKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH-- 58
+ Y L+K+ LG G G V + ++ +G+ A+K L S K ++++H
Sbjct: 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----------PKARQEVDHHW 76
Query: 59 -----PNIVKVKELIVE----KGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLF 109
P+IV + ++ K + + ECM+ +++ Q F+E +
Sbjct: 77 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGEL-FSRIQERGDQAFTEREAAEIMR 135
Query: 110 QVFRGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDA----FPPYTERV 161
+ + ++H HRD+KPENLL + +K+ DFG A+E P YT
Sbjct: 136 DIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTP-- 193
Query: 162 GTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLL-FRPLFQGTDEADQMYKICSVLGSP 220
+Y APE+L Y DMW++G IM LL F P + T +A SP
Sbjct: 194 ---YYVAPEVLGPEK-YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI----------SP 239
Query: 221 TMDSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEAL 280
M R+ Y FP + SEDA LI L DP +R T + +
Sbjct: 240 GMK------RRIRLGQYGFP-------NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFM 286
Query: 281 QHPFFKRCLYVP 292
HP+ + + VP
Sbjct: 287 NHPWINQSMVVP 298
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 5 SLTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
+ +++GSG FG V W +K VAIK +++ E+ + E + + KL+HP
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDF-IEEAEVMMKLSHPK 63
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
+V++ + +E+ + VFE M+ L + + ++ LF+ + V G+ Y+ +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGC--LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKSG 176
HRDL N LV + IK++DFG+ R + YT GT++ + +PE+ F
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEV-FSFS 179
Query: 177 LYSSKVDMWAMGAIMAELL 195
YSSK D+W+ G +M E+
Sbjct: 180 RYSSKSDVWSFGVLMWEVF 198
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 121/284 (42%), Gaps = 32/284 (11%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKV 64
S T+ LG G FG V + +G +A K +K ++K E+ + +L+H N++++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYF 124
+ K ++ V E + +L + + +E ++ Q+ G+ +MHQ
Sbjct: 152 YDAFESKNDIVLVMEYVDGG--ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYIL 209
Query: 125 HRDLKPENLLV---SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSSK 181
H DLKPEN+L IKI DFGLAR GT + APE++ S
Sbjct: 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVV-NYDFVSFP 268
Query: 182 VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFPQ 241
DMW++G I LL F G ++A+ + I + + + D
Sbjct: 269 TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQD-------------- 314
Query: 242 LSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
SE+A I L + R +A+EAL+HP+
Sbjct: 315 ------------ISEEAKEFISKLLIKEKSWRISASEALKHPWL 346
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 103/197 (52%), Gaps = 14/197 (7%)
Query: 5 SLTKKLGSGSFGCVWQA--VNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIV 62
+ +++GSG FG V +NK + VAIK +K+ E + E + + KL+HP +V
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNK---DKVAIKTIKEGSMSEDDF-IEEAEVMMKLSHPKLV 85
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
++ + +E+ + VFE M+ L + + ++ LF+ + V G+ Y+ +
Sbjct: 86 QLYGVCLEQAPICLVFEFMEHGC--LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC 143
Query: 123 YFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKSGLY 178
HRDL N LV + IK++DFG+ R + YT GT++ + +PE+ F Y
Sbjct: 144 VIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEV-FSFSRY 201
Query: 179 SSKVDMWAMGAIMAELL 195
SSK D+W+ G +M E+
Sbjct: 202 SSKSDVWSFGVLMWEVF 218
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 48/297 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M + K LG G+FG V K +G A+K L+K E + E + L+
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++F+E + + ++ L
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 121
Query: 116 DYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
+Y+H + +RD+K ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL- 180
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
+ Y VD W +G +M E++ R F D ++++++ +
Sbjct: 181 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELI------------------L 221
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+FP+ + S +A +L+ L DP +R A E ++H FF
Sbjct: 222 MEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 267
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 48/297 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M + K LG G+FG V K +G A+K L+K E + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++F+E + + ++ L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 116 DYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
+Y+H + +RD+K ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL- 177
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
+ Y VD W +G +M E++ R F D ++++++ +
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELI------------------L 218
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+FP+ + S +A +L+ L DP +R A E ++H FF
Sbjct: 219 MEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 165
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGLAR ++ P YT R G RW I ++
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 226 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 269
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 48/297 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M + K LG G+FG V K +G A+K L+K E + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++F+E + + ++ L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 116 DYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
+Y+H + +RD+K ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL- 177
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
+ Y VD W +G +M E++ R F D ++++++ +
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELI------------------L 218
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+FP+ + S +A +L+ L DP +R A E ++H FF
Sbjct: 219 MEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 48/297 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M + K LG G+FG V K +G A+K L+K E + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++F+E + + ++ L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 116 DYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
+Y+H + +RD+K ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL- 177
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
+ Y VD W +G +M E++ R F D ++++++ +
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELI------------------L 218
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+FP+ + S +A +L+ L DP +R A E ++H FF
Sbjct: 219 MEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 111/229 (48%), Gaps = 26/229 (11%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE---KCLNLR-EVKCLRKLNH 58
+ +L + +G G FG V++A G+ VA+KA + + N+R E K L H
Sbjct: 8 ELTLEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKH 65
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PNI+ ++ + +++ N+ V E + L +++ K+ + W Q+ RG++Y
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVN-----WAVQIARGMNY 120
Query: 118 MHQQGY---FHRDLKPENLLV---------SQGTIKIADFGLAREIDAFPPYTERVGTRW 165
+H + HRDLK N+L+ S +KI DFGLARE + G
Sbjct: 121 LHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYA 179
Query: 166 YQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKIC 214
+ APE++ ++ ++S D+W+ G ++ ELL F+G D Y +
Sbjct: 180 WMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVA 227
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 126/295 (42%), Gaps = 47/295 (15%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL-------REVKCLRKL 56
Y L LG G+FG V ++ +G VA+K L +R+K +L RE++ L+
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKIL----NRQKIRSLDVVGKIKREIQNLKLF 68
Query: 57 NHPNIVKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP+I+K+ ++I + F V E + L+ + K E + Q+ +
Sbjct: 69 RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI----CKHGRVEEMEARRLFQQILSAV 124
Query: 116 DYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFK 174
DY H+ HRDLKPEN+L+ + KIADFGL+ + G+ Y APE++
Sbjct: 125 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 184
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMA 234
+VD+W+ G I+ LL C L P D L
Sbjct: 185 RLYAGPEVDIWSCGVILYALL------------------CGTL--PFDDEHVPTL----- 219
Query: 235 INYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
F ++ G + + + L+ + DP KR T + +H +FK+ L
Sbjct: 220 ----FKKIRG-GVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 127/304 (41%), Gaps = 43/304 (14%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQC----- 114
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E +
Sbjct: 115 -PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGD--QAFTEREASEIXKSIG 171
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E + T T +Y A
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVA 231
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
PE+L Y D W++G I LL P F Y + SP +
Sbjct: 232 PEVLGPEK-YDKSCDXWSLGVIXYILLCGYPPF---------YSNHGLAISPGXKT---- 277
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
+ Y+FP + SE+ LI +L +P +R T E HP+ +
Sbjct: 278 --RIRXGQYEFP-------NPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQS 328
Query: 289 LYVP 292
VP
Sbjct: 329 TKVP 332
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 4/196 (2%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKVKELIV 69
LG G++G V+ + + +AIK + + SR E+ + L H NIV+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 70 EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHRDLK 129
E G + E + + K +E + + Q+ GL Y+H HRD+K
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 149
Query: 130 PENLLVS--QGTIKIADFGLAREIDAFPPYTER-VGTRWYQAPEILFKSGL-YSSKVDMW 185
+N+L++ G +KI+DFG ++ + P TE GT Y APEI+ K Y D+W
Sbjct: 150 GDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIW 209
Query: 186 AMGAIMAELLLFRPLF 201
++G + E+ +P F
Sbjct: 210 SLGCTIIEMATGKPPF 225
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 48/297 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M + K LG G+FG V K +G A+K L+K E + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++F+E + + ++ L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 116 DYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
+Y+H + +RD+K ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVL- 177
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
+ Y VD W +G +M E++ R F D ++++++ +
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELI------------------L 218
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+FP+ + S +A +L+ L DP +R A E ++H FF
Sbjct: 219 MEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 48/297 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M + K LG G+FG V K +G A+K L+K E + E + L+
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++F+E + + ++ L
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 123
Query: 116 DYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
+Y+H + +RD+K ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 124 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL- 182
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
+ Y VD W +G +M E++ R F D ++++++ +
Sbjct: 183 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELI------------------L 223
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+FP+ + S +A +L+ L DP +R A E ++H FF
Sbjct: 224 MEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 269
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 21/235 (8%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEV---VAIKALKKSYS-REKCLNLREVKCLRKLNH 58
+ + K +GSG G V + G+ VAIKALK Y+ R++ L E + + +H
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDH 109
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
PNI++++ ++ V E M+ Q F+ + L V G+ Y+
Sbjct: 110 PNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ--FTIMQLVGMLRGVGAGMRYL 167
Query: 119 HQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTE-----RVGTRWYQAPEIL 172
GY HRDL N+LV + K++DFGL+R ++ P ++ RW I
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKICSVLGSP 220
F++ +SS D+W+ G +M E+L + RP + T+ ++ Y++ + +G P
Sbjct: 228 FRT--FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCP 280
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 5 SLTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
+ +++GSG FG V W +K VAIK +++ E+ + E + + KL+HP
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDF-IEEAEVMMKLSHPK 63
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
+V++ + +E+ + VFE M+ L + + ++ LF+ + V G+ Y+ +
Sbjct: 64 LVQLYGVCLEQAPICLVFEFMEHGC--LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 121
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKSG 176
HRDL N LV + IK++DFG+ R + YT GT++ + +PE+ F
Sbjct: 122 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEV-FSFS 179
Query: 177 LYSSKVDMWAMGAIMAELL 195
YSSK D+W+ G +M E+
Sbjct: 180 RYSSKSDVWSFGVLMWEVF 198
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 79 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 136
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGL+R ++ P YT R G RW I ++
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 197 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 240
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 5 SLTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
+ +++GSG FG V W +K VAIK +++ E+ + E + + KL+HP
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDF-IEEAEVMMKLSHPK 61
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
+V++ + +E+ + VFE M+ L + + ++ LF+ + V G+ Y+ +
Sbjct: 62 LVQLYGVCLEQAPICLVFEFMEHGC--LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 119
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKSG 176
HRDL N LV + IK++DFG+ R + YT GT++ + +PE+ F
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEV-FSFS 177
Query: 177 LYSSKVDMWAMGAIMAELL 195
YSSK D+W+ G +M E+
Sbjct: 178 RYSSKSDVWSFGVLMWEVF 196
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 9/203 (4%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS--YSREKCLNL-REVKCLRKLNH 58
+ + + + +G GSFG V + ++ A+K + K R + N+ +E++ ++ L H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
P +V + ++ ++F V + + L + Q+ F E VK ++ ++ LDY+
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLL---LGGDLRYHLQQNVHFKEETVKLFICELVMALDYL 131
Query: 119 HQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF--KS 175
Q HRD+KP+N+L+ + G + I DF +A + T GT+ Y APE+ K
Sbjct: 132 QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKG 191
Query: 176 GLYSSKVDMWAMGAIMAELLLFR 198
YS VD W++G ELL R
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGR 214
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 128/297 (43%), Gaps = 48/297 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLN 57
M + K LG G+FG V K +G A+K L+K E + E + L+
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
HP + +K + FV E + L ++++F+E + + ++ L
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHL-----SRERVFTEERARFYGAEIVSAL 118
Query: 116 DYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
+Y+H + +RD+K ENL++ + G IKI DFGL +E I GT Y APE+L
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVL- 177
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
+ Y VD W +G +M E++ R F D ++++++ +
Sbjct: 178 EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-ERLFELI------------------L 218
Query: 234 AINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEALQHPFF 285
+FP+ + S +A +L+ L DP +R A E ++H FF
Sbjct: 219 MEEIRFPR-----------TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 4/196 (2%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKVKELIV 69
LG G++G V+ + + +AIK + + SR E+ + L H NIV+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 70 EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHRDLK 129
E G + E + + K +E + + Q+ GL Y+H HRD+K
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIK 135
Query: 130 PENLLVS--QGTIKIADFGLAREIDAFPPYTER-VGTRWYQAPEILFKSGL-YSSKVDMW 185
+N+L++ G +KI+DFG ++ + P TE GT Y APEI+ K Y D+W
Sbjct: 136 GDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIW 195
Query: 186 AMGAIMAELLLFRPLF 201
++G + E+ +P F
Sbjct: 196 SLGCTIIEMATGKPPF 211
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 146/334 (43%), Gaps = 59/334 (17%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN-- 60
+Y L +KLG G F VW A + + VA+K ++ + E+K L+++N +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE-DEIKLLQRVNDADNT 78
Query: 61 ---------IVKVKELIVEKG----NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAW 107
I+K+ + KG +V VFE + NL L+ KK + + VK
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI--KKYEHRGIPLIYVKQI 136
Query: 108 LFQVFRGLDYMHQQ-GYFHRDLKPENLLV-------SQGTIKIADFGLAREIDAFPPYTE 159
Q+ GLDYMH++ G H D+KPEN+L+ + IKIAD G A D YT
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTN 194
Query: 160 RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQG------TDEADQMYKI 213
+ TR Y++PE+L + + D+W+ ++ EL+ LF+ T + D + +I
Sbjct: 195 SIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 214 CSVLGS-PTMDSWADGLRQAMAINYQFPQLSGV--NLSALMPSASEDAI----------- 259
+LG P+ L + F G+ N+S L ED +
Sbjct: 254 IELLGELPSY------LLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 307
Query: 260 ----NLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
+ + + DP KR A + HP+ K L
Sbjct: 308 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 103/199 (51%), Gaps = 18/199 (9%)
Query: 5 SLTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
+ +++GSG FG V W +K VAIK +++ E+ + E + + KL+HP
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDF-IEEAEVMMKLSHPK 66
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
+V++ + +E+ + VFE M+ L + + ++ LF+ + V G+ Y+ +
Sbjct: 67 LVQLYGVCLEQAPICLVFEFMEHGC--LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 124
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKSG 176
HRDL N LV + IK++DFG+ R + YT GT++ + +PE+ F
Sbjct: 125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEV-FSFS 182
Query: 177 LYSSKVDMWAMGAIMAELL 195
YSSK D+W+ G +M E+
Sbjct: 183 RYSSKSDVWSFGVLMWEVF 201
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 146/334 (43%), Gaps = 59/334 (17%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN-- 60
+Y L +KLG G F VW A + + VA+K ++ + E+K L+++N +
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAE-DEIKLLQRVNDADNT 78
Query: 61 ---------IVKVKELIVEKG----NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAW 107
I+K+ + KG +V VFE + NL L+ KK + + VK
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI--KKYEHRGIPLIYVKQI 136
Query: 108 LFQVFRGLDYMHQQ-GYFHRDLKPENLLV-------SQGTIKIADFGLAREIDAFPPYTE 159
Q+ GLDYMH++ G H D+KPEN+L+ + IKIAD G A D YT
Sbjct: 137 SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH--YTN 194
Query: 160 RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQG------TDEADQMYKI 213
+ TR Y++PE+L + + D+W+ ++ EL+ LF+ T + D + +I
Sbjct: 195 SIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQI 253
Query: 214 CSVLGS-PTMDSWADGLRQAMAINYQFPQLSGV--NLSALMPSASEDAI----------- 259
+LG P+ L + F G+ N+S L ED +
Sbjct: 254 IELLGELPSY------LLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA 307
Query: 260 ----NLIESLCSWDPCKRPTAAEALQHPFFKRCL 289
+ + + DP KR A + HP+ K L
Sbjct: 308 KEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L E ++ ++ + + Q+ +G++Y+ +
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYG--SLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 192
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 193 TESK-FSVASDVWSFGVVLYELFTY 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 36 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 95
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 96 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 153
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGL+R ++ P YT R G RW I ++
Sbjct: 154 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 213
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 214 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 257
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 165
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGL+R ++ P YT R G RW I ++
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 226 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 269
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 78
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 79 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 136
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGL+R ++ P YT R G RW I ++
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 196
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 197 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 240
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 142/325 (43%), Gaps = 47/325 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEV-VAIKALK-----KSYSREKCLNLREVKCLRK 55
E+Y + LG G+FG V + ++ G+ VA+K ++ + +R + L+++K K
Sbjct: 28 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 87
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
N V + + G++ FE + N ++ + K+ Q + V+ +Q+ L
Sbjct: 88 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFL--KENNFQPYPLPHVRHMAYQLCHAL 145
Query: 116 DYMHQQGYFHRDLKPENLL--------------------VSQGTIKIADFGLAREIDAFP 155
++H+ H DLKPEN+L V +I++ADFG A
Sbjct: 146 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHE 203
Query: 156 PYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICS 215
+T V TR Y+ PE++ + G ++ D+W++G I+ E LFQ + + + +
Sbjct: 204 HHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 262
Query: 216 VLGSPTMDSWADGLRQAMAI---------NYQFPQLSGVNLSALMPSASEDAI------N 260
+LG P R+ N + N L +D++ +
Sbjct: 263 ILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 321
Query: 261 LIESLCSWDPCKRPTAAEALQHPFF 285
L+ + +DP +R T AEAL HPFF
Sbjct: 322 LMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 142/325 (43%), Gaps = 47/325 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEV-VAIKALK-----KSYSREKCLNLREVKCLRK 55
E+Y + LG G+FG V + ++ G+ VA+K ++ + +R + L+++K K
Sbjct: 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 78
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
N V + + G++ FE + N ++ + K+ Q + V+ +Q+ L
Sbjct: 79 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFL--KENNFQPYPLPHVRHMAYQLCHAL 136
Query: 116 DYMHQQGYFHRDLKPENLL--------------------VSQGTIKIADFGLAREIDAFP 155
++H+ H DLKPEN+L V +I++ADFG A
Sbjct: 137 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHE 194
Query: 156 PYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICS 215
+T V TR Y+ PE++ + G ++ D+W++G I+ E LFQ + + + +
Sbjct: 195 HHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 253
Query: 216 VLGSPTMDSWADGLRQAMAI---------NYQFPQLSGVNLSALMPSASEDAI------N 260
+LG P R+ N + N L +D++ +
Sbjct: 254 ILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 312
Query: 261 LIESLCSWDPCKRPTAAEALQHPFF 285
L+ + +DP +R T AEAL HPFF
Sbjct: 313 LMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 23/201 (11%)
Query: 13 GSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKVKELIVEKG 72
G FG V++A NK + + A K + E + E+ L +HPNIVK+ + +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 73 NVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPE 131
N++ + E C + +M + ++ +ES ++ Q L+Y+H HRDLK
Sbjct: 81 NLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 132 NLLVS-QGTIKIADFGLA--------REIDAFPPYTERVGTRWYQAPEILF----KSGLY 178
N+L + G IK+ADFG++ + D+F +GT ++ APE++ K Y
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSF------IGTPYWMAPEVVMCETSKDRPY 191
Query: 179 SSKVDMWAMGAIMAELLLFRP 199
K D+W++G + E+ P
Sbjct: 192 DYKADVWSLGITLIEMAEIEP 212
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 116/223 (52%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G+FG V A ++K + VA+K LK + E +L E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + E + NL + + A++ ++Q
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 155 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
Y + R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 213 YKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 253
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 165
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGL+R ++ P YT R G RW I ++
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 226 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 269
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 29/223 (13%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLN-HPNI 61
+ + + L G F V++A + SG A+K L + + ++EV ++KL+ HPNI
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 62 VKV--------KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
V+ +E + + E + L + ++ + + L ++ +K + +Q R
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIF-YQTCR 147
Query: 114 GLDYMHQQG--YFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYT------------ 158
+ +MH+Q HRDLK ENLL+S QGTIK+ DFG A I +P Y+
Sbjct: 148 AVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEE 207
Query: 159 -ERVGTRWYQAPEI--LFKSGLYSSKVDMWAMGAIMAELLLFR 198
R T Y+ PEI L+ + K D+WA+G I+ LL FR
Sbjct: 208 ITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY-LLCFR 249
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 165
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGL+R ++ P YT R G RW I ++
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 226 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 269
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 165
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGL+R ++ P YT R G RW I ++
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 226 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 269
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 46 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 105
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 106 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 163
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGL+R ++ P YT R G RW I ++
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 223
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 224 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 267
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 142/325 (43%), Gaps = 47/325 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEV-VAIKALK-----KSYSREKCLNLREVKCLRK 55
E+Y + LG G+FG V + ++ G+ VA+K ++ + +R + L+++K K
Sbjct: 51 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 110
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
N V + + G++ FE + N ++ + K+ Q + V+ +Q+ L
Sbjct: 111 ENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFL--KENNFQPYPLPHVRHMAYQLCHAL 168
Query: 116 DYMHQQGYFHRDLKPENLL--------------------VSQGTIKIADFGLAREIDAFP 155
++H+ H DLKPEN+L V +I++ADFG A
Sbjct: 169 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHE 226
Query: 156 PYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICS 215
+T V TR Y+ PE++ + G ++ D+W++G I+ E LFQ + + + +
Sbjct: 227 HHTTIVATRHYRPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 285
Query: 216 VLGSPTMDSWADGLRQAMAI---------NYQFPQLSGVNLSALMPSASEDAI------N 260
+LG P R+ N + N L +D++ +
Sbjct: 286 ILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 344
Query: 261 LIESLCSWDPCKRPTAAEALQHPFF 285
L+ + +DP +R T AEAL HPFF
Sbjct: 345 LMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 165
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGL+R ++ P YT R G RW I ++
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 226 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 269
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 152/320 (47%), Gaps = 52/320 (16%)
Query: 1 MEKYSLTKKLGSGSFGCVW--QAVNKH-SGEVVAIKALKKSYSREKCLNLREVKCLRK-L 56
+E + L K LG+G++G V+ + ++ H +G++ A+K LKK+ +K + R+ L
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 57 NH----PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
H P +V + + + + + + N +L Q+++ F+E V+ ++ ++
Sbjct: 113 EHIRQSPFLVTLHYAFQTETKLHLILDYI--NGGELFTHLSQRER-FTEHEVQIYVGEIV 169
Query: 113 RGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV----GTRWYQ 167
L+++H+ G +RD+K EN+L+ S G + + DFGL++E A TER GT Y
Sbjct: 170 LALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA--DETERAYDFCGTIEYM 227
Query: 168 APEIL--FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSW 225
AP+I+ SG + VD W++G +M ELL F E + +I
Sbjct: 228 APDIVRGGDSG-HDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS----------- 275
Query: 226 ADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKR-----PTAAEAL 280
R+ + +PQ +SAL A +LI+ L DP KR A E
Sbjct: 276 ----RRILKSEPPYPQ----EMSAL-------AKDLIQRLLMKDPKKRLGCGPRDADEIK 320
Query: 281 QHPFFKRCLYVPPHLRSTPA 300
+H FF++ + + PA
Sbjct: 321 EHLFFQKINWDDLAAKKVPA 340
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 165
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
GY HRDL N+L++ + K++DFGL R ++ P YT R G RW I ++
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 226 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 269
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 119/231 (51%), Gaps = 22/231 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNH 58
+ + +LG+G+ G V + ++ SG ++A K + K R + + RE++ L + N
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQII--RELQVLHECNS 73
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLM-EAKKQKQQLFSESAVKAWLFQVFRGLD 116
P IV G + E M +L Q++ EAK+ +++ + ++ V RGL
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA-----VLRGLA 128
Query: 117 YMHQQG-YFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
Y+ ++ HRD+KP N+LV S+G IK+ DFG++ + ID+ VGTR Y APE L
Sbjct: 129 YLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMAPERL- 185
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS 224
+ YS + D+W+MG + EL + R D + + ++ G P +D
Sbjct: 186 QGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE----LEAIFGRPVVDG 232
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 131
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 187
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 188 TESK-FSVASDVWSFGVVLYELFTY 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 164
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 165 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 220
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 221 TESK-FSVASDVWSFGVVLYELFTY 244
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 145/307 (47%), Gaps = 33/307 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNH 58
+ + +LG+G+ G V++ +K SG V+A K + K R + + RE++ L + N
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNS 125
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLME-AKKQKQQLFSESAVKAWLFQVFRGLD 116
P IV G + E M +L Q+++ A + +Q+ + ++ V +GL
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-----VIKGLT 180
Query: 117 YMHQQG-YFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
Y+ ++ HRD+KP N+LV S+G IK+ DFG++ + ID+ VGTR Y +PE L
Sbjct: 181 YLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--ANSFVGTRSYMSPERL- 237
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTD--EADQMYKICSVLGSPTMDSWADGLRQ 231
+ YS + D+W+MG + E+ + R D E + M+ C V G D
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEG--------DAAET 288
Query: 232 AMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ-HPFFKRCLY 290
LS + + P A L++ + + P K P+A +L+ F +CL
Sbjct: 289 PPRPRTPGRPLSSYGMDSRPPMA---IFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLI 345
Query: 291 VPPHLRS 297
P R+
Sbjct: 346 KNPAERA 352
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 34/286 (11%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKALKKSYS--REKCLNLREVKCLRKLNHPNIVKVKE 66
++G G++G V + V+K SG+++A+K ++ + +K L + +R + P IV+
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 67 LIVEKGNVFFVFECMQCNLYQLME-AKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ-GYF 124
+ +G+ + E M + + + + E + + L+++ +
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKII 148
Query: 125 HRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL---YSS 180
HRD+KP N+L+ + G IK+ DFG++ ++ T G R Y APE + S Y
Sbjct: 149 HRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDV 208
Query: 181 KVDMWAMGAIMAELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQF 239
+ D+W++G + EL R P + DQ+ ++ V G P
Sbjct: 209 RSDVWSLGITLYELATGRFPYPKWNSVFDQLTQV--VKGDP------------------- 247
Query: 240 PQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
PQLS PS IN + + D KRP E L+HPF
Sbjct: 248 PQLSNSEEREFSPS----FINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 190 TESK-FSVASDVWSFGVVLYELFTY 213
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 132
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 133 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 188
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 189 TESK-FSVASDVWSFGVVLYELFTY 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 139
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 195
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 196 TESK-FSVASDVWSFGVVLYELFTY 219
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 140
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 196
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 197 TESK-FSVASDVWSFGVVLYELFTY 220
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 138
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 139 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 195 TESK-FSVASDVWSFGVVLYELFTY 218
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 192
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 193 TESK-FSVASDVWSFGVVLYELFTY 216
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 137
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 138 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 193
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 194 TESK-FSVASDVWSFGVVLYELFTY 217
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 190 TESK-FSVASDVWSFGVVLYELFTY 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 104/200 (52%), Gaps = 14/200 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L K+LG+G FG VW + VAIK LK + L E + ++KL H +
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGT-WNGNTKVAIKTLKPGTMSPESF-LEEAQIMKKLKHDKL 66
Query: 62 VKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
V++ ++ E+ ++ V E M L L + + + +L + + A QV G+ Y+
Sbjct: 67 VQLYAVVSEE-PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAA---QVAAGMAYIE 122
Query: 120 QQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKS 175
+ Y HRDL+ N+LV G I KIADFGLAR I+ T R G ++ + APE
Sbjct: 123 RMNYIHRDLRSANILVGNGLICKIADFGLARLIED-NEXTARQGAKFPIKWTAPEAAL-Y 180
Query: 176 GLYSSKVDMWAMGAIMAELL 195
G ++ K D+W+ G ++ EL+
Sbjct: 181 GRFTIKSDVWSFGILLTELV 200
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 207
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 208 TESK-FSVASDVWSFGVVLYELFTY 231
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 151
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APESL 207
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 208 TESK-FSVASDVWSFGVVLYELFTY 231
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 165
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
G+ HRDL N+L++ + K++DFGL+R ++ P YT R G RW I ++
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 226 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 269
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 20/199 (10%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEV-VAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+ K+LG+G FG V K G+ VAIK +K+ E + E K + L+H +V+
Sbjct: 12 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEF-IEEAKVMMNLSHEKLVQ 68
Query: 64 VKELIVEKGNVFFVFECMQ----CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + ++ +F + E M N + M + Q QQL V ++Y+
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLE 122
Query: 120 QQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKS 175
+ + HRDL N LV+ QG +K++DFGL+R + YT VG+++ + PE+L S
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 181
Query: 176 GLYSSKVDMWAMGAIMAEL 194
+SSK D+WA G +M E+
Sbjct: 182 K-FSSKSDIWAFGVLMWEI 199
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 20/199 (10%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEV-VAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+ K+LG+G FG V K G+ VAIK +K+ E + E K + L+H +V+
Sbjct: 11 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEF-IEEAKVMMNLSHEKLVQ 67
Query: 64 VKELIVEKGNVFFVFECMQ----CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + ++ +F + E M N + M + Q QQL V ++Y+
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLE 121
Query: 120 QQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKS 175
+ + HRDL N LV+ QG +K++DFGL+R + YT VG+++ + PE+L S
Sbjct: 122 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 180
Query: 176 GLYSSKVDMWAMGAIMAEL 194
+SSK D+WA G +M E+
Sbjct: 181 K-FSSKSDIWAFGVLMWEI 198
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 20/199 (10%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEV-VAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+ K+LG+G FG V K G+ VAIK +K+ E + E K + L+H +V+
Sbjct: 27 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEF-IEEAKVMMNLSHEKLVQ 83
Query: 64 VKELIVEKGNVFFVFECMQ----CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + ++ +F + E M N + M + Q QQL V ++Y+
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLE 137
Query: 120 QQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKS 175
+ + HRDL N LV+ QG +K++DFGL+R + YT VG+++ + PE+L S
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 196
Query: 176 GLYSSKVDMWAMGAIMAEL 194
+SSK D+WA G +M E+
Sbjct: 197 K-FSSKSDIWAFGVLMWEI 214
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G+FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + E + NL + + A++ ++Q
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 155 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
Y + R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 213 YKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 253
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 72
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL SA Q+ G+
Sbjct: 73 VQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA------QIASGMA 125
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 126 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 184
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 185 L-YGRFTIKSDVWSFGILLTEL 205
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 20/199 (10%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEV-VAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+ K+LG+G FG V K G+ VAIK +K+ E + E K + L+H +V+
Sbjct: 18 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEF-IEEAKVMMNLSHEKLVQ 74
Query: 64 VKELIVEKGNVFFVFECMQ----CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + ++ +F + E M N + M + Q QQL V ++Y+
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLE 128
Query: 120 QQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKS 175
+ + HRDL N LV+ QG +K++DFGL+R + YT VG+++ + PE+L S
Sbjct: 129 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 187
Query: 176 GLYSSKVDMWAMGAIMAEL 194
+SSK D+WA G +M E+
Sbjct: 188 K-FSSKSDIWAFGVLMWEI 205
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G+FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + E + NL + + A++ ++Q
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 155 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
Y R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 213 YKNTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 253
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 24/206 (11%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 64 VKELIVEKG--NVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
K + G N+ + E + +L ++A ++ + + Q+ +G++Y+
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER---IDHIKLLQYTSQICKGMEYLGT 135
Query: 121 QGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEI 171
+ Y HRDL N+LV ++ +KI DFGL + P E + WY APE
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEXXKVKEPGESPIFWY-APES 191
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLF 197
L +S +S D+W+ G ++ EL +
Sbjct: 192 LTESK-FSVASDVWSFGVVLYELFTY 216
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 116/223 (52%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G+FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + E + NL + + A++ ++Q
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 155 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
Y + R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 213 YKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 253
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 102/199 (51%), Gaps = 20/199 (10%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEV-VAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+ K+LG+G FG V K G+ VAIK +K+ E + E K + L+H +V+
Sbjct: 7 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEF-IEEAKVMMNLSHEKLVQ 63
Query: 64 VKELIVEKGNVFFVFECMQ----CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + ++ +F + E M N + M + Q QQL V ++Y+
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLE 117
Query: 120 QQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKS 175
+ + HRDL N LV+ QG +K++DFGL+R + YT VG+++ + PE+L S
Sbjct: 118 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSVGSKFPVRWSPPEVLMYS 176
Query: 176 GLYSSKVDMWAMGAIMAEL 194
+SSK D+WA G +M E+
Sbjct: 177 K-FSSKSDIWAFGVLMWEI 194
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + E + NL + + A++ ++Q
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 201 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 258
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
Y + R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 259 YKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 299
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 17/244 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREK-----CLNLREVKCLRK 55
M +S+ + +G G FG V+ +G++ A+K L K + K LN R + L
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 246
Query: 56 LNH-PNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P IV + + F+ + M Y L + +FSE+ ++ + ++
Sbjct: 247 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEII 301
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
GL++MH + +RDLKP N+L+ + G ++I+D GLA + P+ VGT Y APE+
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEV 360
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQ--GTDEADQMYKICSVLGSPTMDSWADGL 229
L K Y S D +++G ++ +LL F+ T + ++ ++ + DS++ L
Sbjct: 361 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL 420
Query: 230 RQAM 233
R +
Sbjct: 421 RSLL 424
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 8 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 64
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 65 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 117
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ YT R G ++ + APE
Sbjct: 118 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEA 176
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 177 I-NYGTFTIKSDVWSFGILLTEIV 199
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 17/244 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREK-----CLNLREVKCLRK 55
M +S+ + +G G FG V+ +G++ A+K L K + K LN R + L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 56 LNH-PNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P IV + + F+ + M Y L + +FSE+ ++ + ++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEII 302
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
GL++MH + +RDLKP N+L+ + G ++I+D GLA + P+ VGT Y APE+
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEV 361
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQ--GTDEADQMYKICSVLGSPTMDSWADGL 229
L K Y S D +++G ++ +LL F+ T + ++ ++ + DS++ L
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL 421
Query: 230 RQAM 233
R +
Sbjct: 422 RSLL 425
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 17/244 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREK-----CLNLREVKCLRK 55
M +S+ + +G G FG V+ +G++ A+K L K + K LN R + L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 56 LNH-PNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P IV + + F+ + M Y L + +FSE+ ++ + ++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEII 302
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
GL++MH + +RDLKP N+L+ + G ++I+D GLA + P+ VGT Y APE+
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEV 361
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQ--GTDEADQMYKICSVLGSPTMDSWADGL 229
L K Y S D +++G ++ +LL F+ T + ++ ++ + DS++ L
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL 421
Query: 230 RQAM 233
R +
Sbjct: 422 RSLL 425
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 118/244 (48%), Gaps = 17/244 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREK-----CLNLREVKCLRK 55
M +S+ + +G G FG V+ +G++ A+K L K + K LN R + L
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 247
Query: 56 LNH-PNIVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P IV + + F+ + M Y L + +FSE+ ++ + ++
Sbjct: 248 TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL-----SQHGVFSEADMRFYAAEII 302
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEI 171
GL++MH + +RDLKP N+L+ + G ++I+D GLA + P+ VGT Y APE+
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEV 361
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLFRPLFQ--GTDEADQMYKICSVLGSPTMDSWADGL 229
L K Y S D +++G ++ +LL F+ T + ++ ++ + DS++ L
Sbjct: 362 LQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPEL 421
Query: 230 RQAM 233
R +
Sbjct: 422 RSLL 425
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 133
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HRDL N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTK---VLPQDKEFFKVKEPGESPIFWY-APESL 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 190 TESK-FSVASDVWSFGVVLYELFTY 213
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 69
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 70 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 122
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ YT R G ++ + APE
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEA 181
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 182 I-NYGTFTIKSDVWSFGILLTEIV 204
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + E + NL + + A++ ++Q
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 147 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 204
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
Y + R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 205 YKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 245
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 18 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 74
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 75 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 127
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ YT R G ++ + APE
Sbjct: 128 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEA 186
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 187 I-NYGTFTIKSDVWSFGILLTEIV 209
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 18/211 (8%)
Query: 10 LGSGSFGCVWQAVNKHSGE---VVAIKALKKSYS-REKCLNLREVKCLRKLNHPNIVKVK 65
+G+G FG V + K G+ VAIK LK Y+ R++ L E + + HPNI++++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFH 125
++ V + E M+ Q F+ + L + G+ Y+ + Y H
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQ--FTVIQLVGMLRGIASGMRYLAEMSYVH 139
Query: 126 RDLKPENLLVSQGTI-KIADFGLAR---EIDAFPPYTERVG----TRWYQAPEILFKSGL 177
RDL N+LV+ + K++DFGL+R E + P YT +G RW I F+
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRK-- 197
Query: 178 YSSKVDMWAMGAIMAELLLF--RPLFQGTDE 206
++S D W+ G +M E++ F RP + +++
Sbjct: 198 FTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 228
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 75
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 76 VQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA------QIASGMA 128
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 187
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 188 L-YGRFTIKSDVWSFGILLTEL 208
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 75
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 76 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 128
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ YT R G ++ + APE
Sbjct: 129 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEA 187
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 188 I-NYGTFTIKSDVWSFGILLTEIV 210
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 116/223 (52%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G+FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + E + NL + + A++ ++Q
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + +IADFGLAR+I+
Sbjct: 155 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDY 212
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
Y + R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 213 YKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 253
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 154/333 (46%), Gaps = 38/333 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNH 58
+ + +LG+G+ G V++ +K SG V+A K + K R + + RE++ L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNS 63
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLME-AKKQKQQLFSESAVKAWLFQVFRGLD 116
P IV G + E M +L Q+++ A + +Q+ + ++ V +GL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-----VIKGLT 118
Query: 117 YMHQQG-YFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
Y+ ++ HRD+KP N+LV S+G IK+ DFG++ + ID+ VGTR Y +PE L
Sbjct: 119 YLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERL- 175
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTD--EADQMYKICSVLGSPTMDSWADGLRQ 231
+ YS + D+W+MG + E+ + R D E + M+ C V G D
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEG--------DAAET 226
Query: 232 AMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ-HPFFKRCLY 290
LS + + P A L++ + + P K P+ +L+ F +CL
Sbjct: 227 PPRPRTPGRPLSSYGMDSRPPMA---IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 291 VPPHLRSTPAVAATRRGMLKQQGDRIDAEALPY 323
P R A ++ M+ R DAE + +
Sbjct: 284 KNPAER-----ADLKQLMVHAFIKRSDAEEVDF 311
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + E + NL + + A++ ++Q
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 142 TFKD--LVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDY 199
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
Y + R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 200 YKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 240
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 23 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 79
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 80 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 132
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ YT R G ++ + APE
Sbjct: 133 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEA 191
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 192 I-NYGTFTIKSDVWSFGILLTEIV 214
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN---KHSGEVVAIKALKKSYS---REKCLNLREVKCLRK 55
E+ L + +G G FG V Q + ++ VAIK K S REK L +E +R+
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL--QEALTMRQ 67
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
+HP+IVK+ +I E V+ + E C L +L + ++ +++ + +Q+ L
Sbjct: 68 FDHPHIVKLIGVITE-NPVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG---TRWYQAPEI 171
Y+ + + HRD+ N+LVS +K+ DFGL+R ++ Y G +W I
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLL--FRPLFQGTDEADQMYKI 213
F+ ++S D+W G M E+L+ +P FQG D + +I
Sbjct: 185 NFRR--FTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 324
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQK----QQLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 325 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA------QIASGMA 377
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 378 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 436
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 437 L-YGRFTIKSDVWSFGILLTEL 457
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 154/333 (46%), Gaps = 38/333 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNH 58
+ + +LG+G+ G V++ +K SG V+A K + K R + + RE++ L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNS 63
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLME-AKKQKQQLFSESAVKAWLFQVFRGLD 116
P IV G + E M +L Q+++ A + +Q+ + ++ V +GL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-----VIKGLT 118
Query: 117 YMHQQG-YFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
Y+ ++ HRD+KP N+LV S+G IK+ DFG++ + ID+ VGTR Y +PE L
Sbjct: 119 YLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERL- 175
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTD--EADQMYKICSVLGSPTMDSWADGLRQ 231
+ YS + D+W+MG + E+ + R D E + M+ C V G D
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEG--------DAAET 226
Query: 232 AMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ-HPFFKRCLY 290
LS + + P A L++ + + P K P+ +L+ F +CL
Sbjct: 227 PPRPRTPGRPLSSYGMDSRPPMA---IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 291 VPPHLRSTPAVAATRRGMLKQQGDRIDAEALPY 323
P R A ++ M+ R DAE + +
Sbjct: 284 KNPAER-----ADLKQLMVHAFIKRSDAEEVDF 311
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 123/290 (42%), Gaps = 35/290 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
EKY + + LG G FG V + V S + K +K ++ L +E+ L H NI
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNI 63
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
+ + E + +FE + + E +E + +++ QV L ++H
Sbjct: 64 LHLHESFESMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH 121
Query: 122 GYFHRDLKPENLLVS---QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
H D++PEN++ TIKI +FG AR++ + Y APE+ + +
Sbjct: 122 NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-HQHDVV 180
Query: 179 SSKVDMWAMGAIMAELLL-FRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINY 237
S+ DMW++G ++ LL P T++ + M Y
Sbjct: 181 STATDMWSLGTLVYVLLSGINPFLAETNQ--------------------QIIENIMNAEY 220
Query: 238 QFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
F + + +S +A++ ++ L + R TA+EALQHP+ K+
Sbjct: 221 TFDEEAFKEISI-------EAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN---KHSGEVVAIKALKKSYS---REKCLNLREVKCLRK 55
E+ L + +G G FG V Q + ++ VAIK K S REK L +E +R+
Sbjct: 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL--QEALTMRQ 72
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
+HP+IVK+ +I E V+ + E C L +L + ++ +++ + +Q+ L
Sbjct: 73 FDHPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 129
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG---TRWYQAPEI 171
Y+ + + HRD+ N+LVS +K+ DFGL+R ++ Y G +W I
Sbjct: 130 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 189
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLL--FRPLFQGTDEADQMYKI 213
F+ ++S D+W G M E+L+ +P FQG D + +I
Sbjct: 190 NFRR--FTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 230
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 102/199 (51%), Gaps = 18/199 (9%)
Query: 5 SLTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
+ +++GSG FG V W +K VAIK +++ E+ + E + + KL+HP
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDF-IEEAEVMMKLSHPK 64
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
+V++ + +E+ + V E M+ L + + ++ LF+ + V G+ Y+ +
Sbjct: 65 LVQLYGVCLEQAPICLVTEFMEHGC--LSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 122
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKSG 176
HRDL N LV + IK++DFG+ R + YT GT++ + +PE+ F
Sbjct: 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFV-LDDQYTSSTGTKFPVKWASPEV-FSFS 180
Query: 177 LYSSKVDMWAMGAIMAELL 195
YSSK D+W+ G +M E+
Sbjct: 181 RYSSKSDVWSFGVLMWEVF 199
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 106/211 (50%), Gaps = 18/211 (8%)
Query: 10 LGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPNIVKVK 65
+G+G FG V K G+ VAIK LK Y+ ++ + L E + + +HPN++ ++
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFH 125
++ + V + E M+ L +Q F+ + L + G+ Y+ Y H
Sbjct: 101 GVVTKSTPVMIITEFMENG--SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH 158
Query: 126 RDLKPENLLVSQGTI-KIADFGLAREID---AFPPYTERVG----TRWYQAPEILFKSGL 177
RDL N+LV+ + K++DFGL+R ++ + P YT +G RW I ++
Sbjct: 159 RDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK-- 216
Query: 178 YSSKVDMWAMGAIMAELLLF--RPLFQGTDE 206
++S D+W+ G +M E++ + RP + T++
Sbjct: 217 FTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 247
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN---KHSGEVVAIKALKKSYS---REKCLNLREVKCLRK 55
E+ L + +G G FG V Q + ++ VAIK K S REK L +E +R+
Sbjct: 38 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL--QEALTMRQ 95
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
+HP+IVK+ +I E V+ + E C L +L + ++ +++ + +Q+ L
Sbjct: 96 FDHPHIVKLIGVITENP-VWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 152
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG---TRWYQAPEI 171
Y+ + + HRD+ N+LVS +K+ DFGL+R ++ Y G +W I
Sbjct: 153 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 212
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLL--FRPLFQGTDEADQMYKI 213
F+ ++S D+W G M E+L+ +P FQG D + +I
Sbjct: 213 NFRR--FTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 253
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 115/223 (51%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + E + NL + + A++ ++Q
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 144 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 201
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
Y + R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 202 YKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 242
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 68
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 69 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA------QIASGMA 121
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 122 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 180
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 181 L-YGRFTIKSDVWSFGILLTEL 201
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 125/263 (47%), Gaps = 31/263 (11%)
Query: 6 LTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPNI 61
+ + +G+G FG V K G+ VAIK LK Y+ ++ + L E + + +HPN+
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNV 106
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
V ++ ++ V V E M+ K Q F+ + L + G+ Y+
Sbjct: 107 VHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ--FTVIQLVGMLRGIAAGMRYLADM 164
Query: 122 GYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP--YTERVG---TRWYQAPEILFKS 175
GY HRDL N+LV+ + K++DFGL+R I+ P YT G RW I ++
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 176 GLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKICSVLGSPT------M 222
++S D+W+ G +M E++ + RP + +++ ++ Y++ + + P +
Sbjct: 225 --FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPAPMDCPAGLHQLML 282
Query: 223 DSWADGLRQAMAINYQFPQLSGV 245
D W ++ A +F Q+ G+
Sbjct: 283 DCW----QKERAERPKFEQIVGI 301
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 113/226 (50%), Gaps = 21/226 (9%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPN 60
S+ K +G+G FG V K + VAIK LK Y+ ++ + L E + + +HPN
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPN 107
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
I++++ ++ + V V E M+ K Q F+ + L + G+ Y+
Sbjct: 108 IIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ--FTVIQLVGMLRGIASGMKYLSD 165
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFK 174
G HRDL N+L++ + K++DFGL+R ++ P YT R G RW I ++
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR 225
Query: 175 SGLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE-----ADQMYKI 213
++S D+W+ G ++ E++ + RP ++ +++ D+ Y++
Sbjct: 226 K--FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRL 269
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 241
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 242 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA------QIASGMA 294
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 353
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 354 L-YGRFTIKSDVWSFGILLTEL 374
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN---KHSGEVVAIKALKKSYS---REKCLNLREVKCLRK 55
E+ L + +G G FG V Q + ++ VAIK K S REK L +E +R+
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL--QEALTMRQ 67
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
+HP+IVK+ +I E V+ + E C L +L + ++ +++ + +Q+ L
Sbjct: 68 FDHPHIVKLIGVITE-NPVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 124
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG---TRWYQAPEI 171
Y+ + + HRD+ N+LVS +K+ DFGL+R ++ Y G +W I
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLL--FRPLFQGTDEADQMYKI 213
F+ ++S D+W G M E+L+ +P FQG D + +I
Sbjct: 185 NFRR--FTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 75
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 76 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA------QIASGMA 128
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 187
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 188 L-YGRFTIKSDVWSFGILLTEL 208
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 241
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 242 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA------QIASGMA 294
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 353
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 354 L-YGRFTIKSDVWSFGILLTEL 374
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN---KHSGEVVAIKALKKSYS---REKCLNLREVKCLRK 55
E+ L + +G G FG V Q + ++ VAIK K S REK L +E +R+
Sbjct: 13 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL--QEALTMRQ 70
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
+HP+IVK+ +I E V+ + E C L +L + ++ +++ + +Q+ L
Sbjct: 71 FDHPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 127
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG---TRWYQAPEI 171
Y+ + + HRD+ N+LVS +K+ DFGL+R ++ Y G +W I
Sbjct: 128 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 187
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLL--FRPLFQGTDEADQMYKI 213
F+ ++S D+W G M E+L+ +P FQG D + +I
Sbjct: 188 NFRR--FTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 228
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 154/333 (46%), Gaps = 38/333 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNH 58
+ + +LG+G+ G V++ +K SG V+A K + K R + + RE++ L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNS 63
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLME-AKKQKQQLFSESAVKAWLFQVFRGLD 116
P IV G + E M +L Q+++ A + +Q+ + ++ V +GL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-----VIKGLT 118
Query: 117 YMHQQG-YFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
Y+ ++ HRD+KP N+LV S+G IK+ DFG++ + ID+ VGTR Y +PE L
Sbjct: 119 YLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERL- 175
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTD--EADQMYKICSVLGSPTMDSWADGLRQ 231
+ YS + D+W+MG + E+ + R D E + M+ C V G D
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEG--------DAAET 226
Query: 232 AMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ-HPFFKRCLY 290
LS + + P A L++ + + P K P+ +L+ F +CL
Sbjct: 227 PPRPRTPGRPLSSYGMDSRPPMA---IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 291 VPPHLRSTPAVAATRRGMLKQQGDRIDAEALPY 323
P R A ++ M+ R DAE + +
Sbjct: 284 KNPAER-----ADLKQLMVHAFIKRSDAEEVDF 311
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 154/333 (46%), Gaps = 38/333 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNH 58
+ + +LG+G+ G V++ +K SG V+A K + K R + + RE++ L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNS 63
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLME-AKKQKQQLFSESAVKAWLFQVFRGLD 116
P IV G + E M +L Q+++ A + +Q+ + ++ V +GL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-----VIKGLT 118
Query: 117 YMHQQG-YFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
Y+ ++ HRD+KP N+LV S+G IK+ DFG++ + ID+ VGTR Y +PE L
Sbjct: 119 YLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERL- 175
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTD--EADQMYKICSVLGSPTMDSWADGLRQ 231
+ YS + D+W+MG + E+ + R D E + M+ C V G D
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEG--------DAAET 226
Query: 232 AMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ-HPFFKRCLY 290
LS + + P A L++ + + P K P+ +L+ F +CL
Sbjct: 227 PPRPRTPGRPLSSYGMDSRPPMA---IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 283
Query: 291 VPPHLRSTPAVAATRRGMLKQQGDRIDAEALPY 323
P R A ++ M+ R DAE + +
Sbjct: 284 KNPAER-----ADLKQLMVHAFIKRSDAEEVDF 311
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN---KHSGEVVAIKALKKSYS---REKCLNLREVKCLRK 55
E+ L + +G G FG V Q + ++ VAIK K S REK L +E +R+
Sbjct: 12 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL--QEALTMRQ 69
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
+HP+IVK+ +I E V+ + E C L +L + ++ +++ + +Q+ L
Sbjct: 70 FDHPHIVKLIGVITENP-VWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 126
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG---TRWYQAPEI 171
Y+ + + HRD+ N+LVS +K+ DFGL+R ++ Y G +W I
Sbjct: 127 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 186
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLL--FRPLFQGTDEADQMYKI 213
F+ ++S D+W G M E+L+ +P FQG D + +I
Sbjct: 187 NFRR--FTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 227
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 110/208 (52%), Gaps = 17/208 (8%)
Query: 8 KKLGSGSFGCVWQAVNKHSG---EV-VAIKALKKSYSREKCLN-LREVKCLRKLNHPNIV 62
K +G+G FG V++ + K S EV VAIK LK Y+ ++ ++ L E + + +H NI+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+++ +I + + + E M+ L + ++K FS + L + G+ Y+
Sbjct: 110 RLEGVISKYKPMMIITEYMENG--ALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167
Query: 123 YFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYT-----ERVGTRWYQAPEILFKSG 176
Y HRDL N+LV+ + K++DFGL+R ++ P T ++ RW I ++
Sbjct: 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK- 226
Query: 177 LYSSKVDMWAMGAIMAELLLF--RPLFQ 202
++S D+W+ G +M E++ + RP ++
Sbjct: 227 -FTSASDVWSFGIVMWEVMTYGERPYWE 253
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 66
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 67 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA------QIASGMA 119
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 120 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 178
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 179 L-YGRFTIKSDVWSFGILLTEL 199
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN---KHSGEVVAIKALKKSYS---REKCLNLREVKCLRK 55
E+ L + +G G FG V Q + ++ VAIK K S REK L +E +R+
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL--QEALTMRQ 64
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
+HP+IVK+ +I E V+ + E C L +L + ++ +++ + +Q+ L
Sbjct: 65 FDHPHIVKLIGVITE-NPVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTAL 121
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG---TRWYQAPEI 171
Y+ + + HRD+ N+LVS +K+ DFGL+R ++ Y G +W I
Sbjct: 122 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 181
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLL--FRPLFQGTDEADQMYKI 213
F+ ++S D+W G M E+L+ +P FQG D + +I
Sbjct: 182 NFRR--FTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 222
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 241
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 242 VQLYAVVSEE-PIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAA------QIASGMA 294
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 295 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 353
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 354 L-YGRFTIKSDVWSFGILLTEL 374
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 64
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 65 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA------QIASGMA 117
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 118 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 176
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 177 L-YGRFTIKSDVWSFGILLTEL 197
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 16/198 (8%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKVKELIV 69
+G G+FG V +A K + VAIK ++ R+ + E++ L ++NHPNIVK+ +
Sbjct: 17 VGRGAFGVVCKA--KWRAKDVAIKQIESESERKAFI--VELRQLSRVNHPNIVKLYGACL 72
Query: 70 EKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ---QGYFH 125
V V E + +LY ++ + ++ + +W Q +G+ Y+H + H
Sbjct: 73 NP--VCLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 126 RDLKPEN-LLVSQGTI-KIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSSKVD 183
RDLKP N LLV+ GT+ KI DFG A +I T G+ + APE+ F+ YS K D
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEV-FEGSNYSEKCD 186
Query: 184 MWAMGAIMAELLLFRPLF 201
+++ G I+ E++ R F
Sbjct: 187 VFSWGIILWEVITRRKPF 204
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 72
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL SA Q+ G+
Sbjct: 73 VQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA------QIASGMA 125
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ +T R G ++ + APE
Sbjct: 126 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEWTARQGAKFPIKWTAPEAA 184
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 185 L-YGRFTIKSDVWSFGILLTEL 205
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 75
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 76 VQLYAVVSEE-PIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA------QIASGMA 128
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 187
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 188 L-YGRFTIKSDVWSFGILLTEL 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 110/205 (53%), Gaps = 18/205 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNH 58
+ + +LG+G+ G V++ +K SG V+A K + K R + + RE++ L + N
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNS 66
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLME-AKKQKQQLFSESAVKAWLFQVFRGLD 116
P IV G + E M +L Q+++ A + +Q+ + ++ V +GL
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-----VIKGLT 121
Query: 117 YMHQQG-YFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
Y+ ++ HRD+KP N+LV S+G IK+ DFG++ + ID E VGTR Y +PE L
Sbjct: 122 YLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMA--NEFVGTRSYMSPERL- 178
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFR 198
+ YS + D+W+MG + E+ + R
Sbjct: 179 QGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 106/218 (48%), Gaps = 14/218 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 27 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ C +LY + A + K F + Q RG+DY+H +
Sbjct: 84 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS 140
Query: 123 YFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFP---PYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA E + + + G+ + APE++ S
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKIC 214
YS + D++A G ++ EL+ + + + DQ+ ++
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 68
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q S + Q+ ++Y
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEY 126
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 185
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 186 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 224
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 225 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN---KHSGEVVAIKALKKSYS---REKCLNLREVKCLRK 55
E+ L + +G G FG V Q + ++ VAIK K S REK L +E +R+
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL--QEALTMRQ 67
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
+HP+IVK+ +I E V+ + E C L +L + ++ +++ + +Q+ L
Sbjct: 68 FDHPHIVKLIGVITE-NPVWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 116 DYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVG---TRWYQAPEI 171
Y+ + + HRD+ N+LVS +K+ DFGL+R ++ Y G +W I
Sbjct: 125 AYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 184
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLL--FRPLFQGTDEADQMYKI 213
F+ ++S D+W G M E+L+ +P FQG D + +I
Sbjct: 185 NFRR--FTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 22/205 (10%)
Query: 8 KKLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
++LG G+FG C + + ++GEVVA+K L+ S RE++ L+ L H NIVK
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 64 VKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + G N+ + E + L + ++ ++ + + Q+ +G++Y+ +
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYG--SLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK 134
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTR--------WYQAPEIL 172
Y HR+L N+LV ++ +KI DFGL + P E + WY APE L
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTK---VLPQDKEYYKVKEPGESPIFWY-APESL 190
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+S +S D+W+ G ++ EL +
Sbjct: 191 TESK-FSVASDVWSFGVVLYELFTY 214
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 68
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q S + Q+ ++Y
Sbjct: 69 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEY 126
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 185
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 186 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 224
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 225 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 115/223 (51%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G+FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + E + NL + + A++ ++Q
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 155 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDX 212
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 213 XKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 253
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 105/198 (53%), Gaps = 16/198 (8%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKVKELIV 69
+G G+FG V +A K + VAIK ++ R+ + E++ L ++NHPNIVK+ +
Sbjct: 16 VGRGAFGVVCKA--KWRAKDVAIKQIESESERKAFI--VELRQLSRVNHPNIVKLYGACL 71
Query: 70 EKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ---QGYFH 125
V V E + +LY ++ + ++ + +W Q +G+ Y+H + H
Sbjct: 72 NP--VCLVMEYAEGGSLYNVLHGA-EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 126 RDLKPEN-LLVSQGTI-KIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSSKVD 183
RDLKP N LLV+ GT+ KI DFG A +I T G+ + APE+ F+ YS K D
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTH--MTNNKGSAAWMAPEV-FEGSNYSEKCD 185
Query: 184 MWAMGAIMAELLLFRPLF 201
+++ G I+ E++ R F
Sbjct: 186 VFSWGIILWEVITRRKPF 203
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 115/223 (51%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G+FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + + NL + + A++ ++Q
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 155 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
Y + R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 213 YKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 253
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 115/223 (51%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G+FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + E + NL + + A++ ++Q
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 155 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDX 212
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 213 XKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 253
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 75
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M L ++ + K QL +A Q+ G+
Sbjct: 76 VQLYAVVSEE-PIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA------QIASGMA 128
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 187
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 188 L-YGRFTIKSDVWSFGILLTEL 208
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++K+ H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKIRHEKL 75
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 76 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA------QIASGMA 128
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 187
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 188 L-YGRFTIKSDVWSFGILLTEL 208
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 109/204 (53%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 9 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 65
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 66 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 118
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HR+L+ N+LVS + KIADFGLAR I+ YT R G ++ + APE
Sbjct: 119 AFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIED-NEYTAREGAKFPIKWTAPEA 177
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 178 I-NYGTFTIKSDVWSFGILLTEIV 200
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 103/202 (50%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 75
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 76 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA------QIASGMA 128
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 129 YVERMNYVHRDLAAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 187
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 188 L-YGRFTIKSDVWSFGILLTEL 208
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 63/310 (20%)
Query: 8 KKLGSGSFG-CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLN-HPNIVKVK 65
K LG GS G V+Q G VA+K + + + L E+K L + + HPN+++
Sbjct: 21 KILGYGSSGTVVFQG--SFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVIRYY 75
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKK---QKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
++ E NL L+E+K + +L E + L Q+ G+ ++H
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 135
Query: 123 YFHRDLKPENLLVSQGT--------------IKIADFGLAREIDA-----FPPYTERVGT 163
HRDLKP+N+LVS + I I+DFGL +++D+ GT
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGT 195
Query: 164 RWYQAPEILFKSGLYSSK------VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVL 217
++APE+L +S +K +D+++MG + Y I S
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV-------------------FYYILSKG 236
Query: 218 GSPTMDSWADGLRQAMAIN--YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPT 275
P D ++ R++ I + ++ ++ +L+ A++ LI + DP KRPT
Sbjct: 237 KHPFGDKYS---RESNIIRGIFSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRPT 289
Query: 276 AAEALQHPFF 285
A + L+HP F
Sbjct: 290 AMKVLRHPLF 299
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKL---- 56
++ + L + +G GS+ V K + + A+K +KK + ++ V+ + +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE-DIDWVQTEKHVFEQA 62
Query: 57 -NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
NHP +V + + +FFV E + N LM Q+Q+ E + + ++ L
Sbjct: 63 SNHPFLVGLHSCFQTESRLFFVIEYV--NGGDLM-FHMQRQRKLPEEHARFYSAEISLAL 119
Query: 116 DYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
+Y+H++G +RDLK +N+L+ S+G IK+ D+G+ +E + + GT Y APEIL
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL- 178
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQ---GTDEADQ 209
+ Y VD WA+G +M E++ R F +D DQ
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 217
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 14/218 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 27 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
C +LY + A + K F + Q RG+DY+H +
Sbjct: 84 LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS 140
Query: 123 YFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFP---PYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA E + + + G+ + APE++ S
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKIC 214
YS + D++A G ++ EL+ + + + DQ+ ++
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 238
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 18/205 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNH 58
+ + +LG+G+ G V++ +K SG V+A K + K R + + RE++ L + N
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNS 63
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLME-AKKQKQQLFSESAVKAWLFQVFRGLD 116
P IV G + E M +L Q+++ A + +Q+ + ++ V +GL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-----VIKGLT 118
Query: 117 YMHQQG-YFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
Y+ ++ HRD+KP N+LV S+G IK+ DFG++ + ID+ VGTR Y +PE L
Sbjct: 119 YLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERL- 175
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFR 198
+ YS + D+W+MG + E+ + R
Sbjct: 176 QGTHYSVQSDIWSMGLSLVEMAVGR 200
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 73
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q S + Q+ ++Y
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEY 131
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 190
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 191 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 230 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKL---- 56
++ + L + +G GS+ V K + + A+K +KK + ++ V+ + +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE-DIDWVQTEKHVFEQA 66
Query: 57 -NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
NHP +V + + +FFV E + N LM Q+Q+ E + + ++ L
Sbjct: 67 SNHPFLVGLHSCFQTESRLFFVIEYV--NGGDLM-FHMQRQRKLPEEHARFYSAEISLAL 123
Query: 116 DYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
+Y+H++G +RDLK +N+L+ S+G IK+ D+G+ +E + + GT Y APEIL
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL- 182
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQ---GTDEADQ 209
+ Y VD WA+G +M E++ R F +D DQ
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 221
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 115/223 (51%), Gaps = 33/223 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGE---VVAIKALKKSYSREKCLNL-REVKCL 53
+K +L K LG G+FG V A ++K + VA+K LK + + +L E++ +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK--------------QKQQ 97
+ + H NI+ + + G ++ + + NL + + A++ ++Q
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 98 LFSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
F + + + +Q+ RG++Y+ Q HRDL N+LV++ + KIADFGLAR+I+
Sbjct: 155 TFKD--LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY 212
Query: 157 YTE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
Y + R+ +W APE LF +Y+ + D+W+ G +M E+
Sbjct: 213 YKKTTNGRLPVKW-MAPEALFDR-VYTHQSDVWSFGVLMWEIF 253
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 68
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q S + Q+ ++Y
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEY 126
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 185
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 186 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 224
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 225 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN---KHSGEVVAIKALKKSYS---REKCLNLREVKCLRK 55
E+ L + +G G FG V Q + ++ VAIK K S REK L +E +R+
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL--QEALTMRQ 447
Query: 56 LNHPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
+HP+IVK+ +I E V+ + E C L ++ +K L +++ + +Q+
Sbjct: 448 FDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKFSLDL---ASLILYAYQLSTA 503
Query: 115 LDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVG---TRWYQAPE 170
L Y+ + + HRD+ N+LVS +K+ DFGL+R ++ Y G +W
Sbjct: 504 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 563
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLL--FRPLFQGTDEADQMYKI 213
I F+ ++S D+W G M E+L+ +P FQG D + +I
Sbjct: 564 INFRR--FTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 68
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q S + Q+ ++Y
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEY 126
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 185
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 186 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 224
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 225 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 75
Query: 62 VKVKELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M L ++ + K QL +A Q+ G+
Sbjct: 76 VQLYAVVSEE-PIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAA------QIASGMA 128
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ YT R G ++ + APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAA 187
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 188 L-YGRFTIKSDVWSFGILLTEL 208
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 137/310 (44%), Gaps = 63/310 (20%)
Query: 8 KKLGSGSFG-CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLN-HPNIVKVK 65
K LG GS G V+Q G VA+K + + + L E+K L + + HPN+++
Sbjct: 21 KILGYGSSGTVVFQG--SFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVIRYY 75
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKK---QKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
++ E NL L+E+K + +L E + L Q+ G+ ++H
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 135
Query: 123 YFHRDLKPENLLVSQGT--------------IKIADFGLAREIDA-----FPPYTERVGT 163
HRDLKP+N+LVS + I I+DFGL +++D+ GT
Sbjct: 136 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 195
Query: 164 RWYQAPEILFKSGLYSSK------VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVL 217
++APE+L +S +K +D+++MG + Y I S
Sbjct: 196 SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV-------------------FYYILSKG 236
Query: 218 GSPTMDSWADGLRQAMAIN--YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPT 275
P D ++ R++ I + ++ ++ +L+ A++ LI + DP KRPT
Sbjct: 237 KHPFGDKYS---RESNIIRGIFSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRPT 289
Query: 276 AAEALQHPFF 285
A + L+HP F
Sbjct: 290 AMKVLRHPLF 299
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 20/199 (10%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEV-VAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+ K+LG+G FG V K G+ VAIK +K+ E + E K + L+H +V+
Sbjct: 12 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEF-IEEAKVMMNLSHEKLVQ 68
Query: 64 VKELIVEKGNVFFVFECMQ----CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + ++ +F + E M N + M + Q QQL V ++Y+
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLE 122
Query: 120 QQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKS 175
+ + HRDL N LV+ QG +K++DFGL+R + YT G+++ + PE+L S
Sbjct: 123 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEYTSSRGSKFPVRWSPPEVLMYS 181
Query: 176 GLYSSKVDMWAMGAIMAEL 194
+SSK D+WA G +M E+
Sbjct: 182 K-FSSKSDIWAFGVLMWEI 199
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKL---- 56
++ + L + +G GS+ V K + + A+K +KK + ++ V+ + +
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDE-DIDWVQTEKHVFEQA 77
Query: 57 -NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
NHP +V + + +FFV E + N LM Q+Q+ E + + ++ L
Sbjct: 78 SNHPFLVGLHSCFQTESRLFFVIEYV--NGGDLM-FHMQRQRKLPEEHARFYSAEISLAL 134
Query: 116 DYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
+Y+H++G +RDLK +N+L+ S+G IK+ D+G+ +E + + GT Y APEIL
Sbjct: 135 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEIL- 193
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQ---GTDEADQ 209
+ Y VD WA+G +M E++ R F +D DQ
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 232
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 125/293 (42%), Gaps = 52/293 (17%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKALKKSY-SREKCLNLREVK-CLRKLNHPNIVKVKE 66
+LG G++G V + + SG++ A+K ++ + S+E+ L ++ R ++ P V
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 67 LIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ-GYFH 125
+ +G+V+ E +L + + K Q E + + + L+++H + H
Sbjct: 101 ALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIH 160
Query: 126 RDLKPENLLVSQ-GTIKIADFGL--------AREIDAFPPYTERVGTRWYQAPEIL---F 173
RD+KP N+L++ G +K DFG+ A++IDA G + Y APE +
Sbjct: 161 RDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA--------GCKPYXAPERINPEL 212
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ-A 232
YS K D+W++G EL + R + DSW +Q
Sbjct: 213 NQKGYSVKSDIWSLGITXIELAILRFPY---------------------DSWGTPFQQLK 251
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFF 285
+ PQL SA + ++ + +RPT E QHPFF
Sbjct: 252 QVVEEPSPQLPADKFSA-------EFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 73
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 74 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 131
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 190
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 191 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 230 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 154/333 (46%), Gaps = 38/333 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNH 58
+ + +LG+G+ G V++ +K SG V+A K + K R + + RE++ L + N
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNS 90
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLME-AKKQKQQLFSESAVKAWLFQVFRGLD 116
P IV G + E M +L Q+++ A + +Q+ + ++ V +GL
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-----VIKGLT 145
Query: 117 YMHQQG-YFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
Y+ ++ HRD+KP N+LV S+G IK+ DFG++ + ID+ VGTR Y +PE L
Sbjct: 146 YLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERL- 202
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQGTD--EADQMYKICSVLGSPTMDSWADGLRQ 231
+ YS + D+W+MG + E+ + R D E + M+ C V G D
Sbjct: 203 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFG-CQVEG--------DAAET 253
Query: 232 AMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ-HPFFKRCLY 290
L+ + + P A L++ + + P K P+ +L+ F +CL
Sbjct: 254 PPRPRTPGRPLNKFGMDSRPPMA---IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 310
Query: 291 VPPHLRSTPAVAATRRGMLKQQGDRIDAEALPY 323
P R A ++ M+ R DAE + +
Sbjct: 311 KNPAER-----ADLKQLMVHAFIKRSDAEEVDF 338
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGNMSPEAF-LQEAQVMKKLRHEKL 242
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 243 VQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA------QIASGMA 295
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGL R I+ YT R G ++ + APE
Sbjct: 296 YVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIED-NEYTARQGAKFPIKWTAPEAA 354
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 355 L-YGRFTIKSDVWSFGILLTEL 375
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 111/224 (49%), Gaps = 20/224 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN---KHSGEVVAIKALKKSYS---REKCLNLREVKCLRK 55
E+ L + +G G FG V Q + ++ VAIK K S REK L +E +R+
Sbjct: 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL--QEALTMRQ 447
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
+HP+IVK+ +I E V+ + E C L +L + ++ +++ + +Q+ L
Sbjct: 448 FDHPHIVKLIGVITE-NPVWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 504
Query: 116 DYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVG---TRWYQAPEI 171
Y+ + + HRD+ N+LVS +K+ DFGL+R ++ Y G +W I
Sbjct: 505 AYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESI 564
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLL--FRPLFQGTDEADQMYKI 213
F+ ++S D+W G M E+L+ +P FQG D + +I
Sbjct: 565 NFRR--FTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 605
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 114/212 (53%), Gaps = 19/212 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNH 58
+ + +LG+G+ G V++ +K SG V+A K + K R + + RE++ L + N
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII--RELQVLHECNS 82
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLME-AKKQKQQLFSESAVKAWLFQVFRGLD 116
P IV G + E M +L Q+++ A + +Q+ + ++ V +GL
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA-----VIKGLT 137
Query: 117 YMHQQG-YFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
Y+ ++ HRD+KP N+LV S+G IK+ DFG++ + ID+ VGTR Y +PE L
Sbjct: 138 YLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA--NSFVGTRSYMSPERL- 194
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFR-PLFQGT 204
+ YS + D+W+MG + E+ + R P+ G+
Sbjct: 195 QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGS 226
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 132/321 (41%), Gaps = 59/321 (18%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKVKELIV 69
LG G FG + ++ +GEV+ +K L + + L+EVK +R L HPN++K ++
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 70 EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFHRDLK 129
+ + F+ E ++ + + Q +S+ ++ + G+ Y+H HRDL
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRV--SFAKDIASGMAYLHSMNIIHRDLN 135
Query: 130 PENLLVSQG-TIKIADFGLAREI----------------DAFPPYTERVGTRWYQAPEIL 172
N LV + + +ADFGLAR + D YT VG ++ APE++
Sbjct: 136 SHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV-VGNPYWMAPEMI 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
Y KVD+++ G ++ C ++G D D L +
Sbjct: 195 -NGRSYDEKVDVFSFGIVL----------------------CEIIGRVNAD--PDYLPRT 229
Query: 233 MAINYQFPQLSGVNLSALM-----PSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKR 287
M G+N+ + P+ + C DP KRP+ + L+H
Sbjct: 230 MDF--------GLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVK-LEHWLETL 280
Query: 288 CLYVPPHLRSTPAVAATRRGM 308
+++ HL P + RG
Sbjct: 281 RMHLAGHLPLGPQLEQLDRGF 301
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 73
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 131
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 190
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 191 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 230 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 136/306 (44%), Gaps = 59/306 (19%)
Query: 8 KKLGSGSFGCV-WQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLN-HPNIVKVK 65
K LG GS G V +Q G VA+K + + + L E+K L + + HPN+++
Sbjct: 39 KILGYGSSGTVVFQG--SFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVIRYY 93
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKK---QKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
++ E NL L+E+K + +L E + L Q+ G+ ++H
Sbjct: 94 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 153
Query: 123 YFHRDLKPENLLVSQGT--------------IKIADFGLAREIDA-----FPPYTERVGT 163
HRDLKP+N+LVS + I I+DFGL +++D+ GT
Sbjct: 154 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 213
Query: 164 RWYQAPEILFKSG--LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPT 221
++APE+L +S + +D+++MG + Y I S P
Sbjct: 214 SGWRAPELLEESTKRRLTRSIDIFSMGCV-------------------FYYILSKGKHPF 254
Query: 222 MDSWADGLRQAMAIN--YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA 279
D ++ R++ I + ++ ++ +L+ A++ LI + DP KRPTA +
Sbjct: 255 GDKYS---RESNIIRGIFSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRPTAMKV 307
Query: 280 LQHPFF 285
L+HP F
Sbjct: 308 LRHPLF 313
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 20/199 (10%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEV-VAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+ K+LG+G FG V K G+ VAIK +K+ E + E K + L+H +V+
Sbjct: 27 TFLKELGTGQFGVV--KYGKWRGQYDVAIKMIKEGSMSEDEF-IEEAKVMMNLSHEKLVQ 83
Query: 64 VKELIVEKGNVFFVFECMQ----CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
+ + ++ +F + E M N + M + Q QQL V ++Y+
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLE 137
Query: 120 QQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKS 175
+ + HRDL N LV+ QG +K++DFGL+R + T VG+++ + PE+L S
Sbjct: 138 SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV-LDDEETSSVGSKFPVRWSPPEVLMYS 196
Query: 176 GLYSSKVDMWAMGAIMAEL 194
+SSK D+WA G +M E+
Sbjct: 197 K-FSSKSDIWAFGVLMWEI 214
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 14 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 70
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 71 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 123
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ T R G ++ + APE
Sbjct: 124 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA 182
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 183 I-NYGTFTIKSDVWSFGILLTEIV 205
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 15 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 71
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 72 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 124
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ T R G ++ + APE
Sbjct: 125 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA 183
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 184 I-NYGTFTIKSDVWSFGILLTEIV 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 69
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 70 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 122
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ T R G ++ + APE
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA 181
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 182 I-NYGTFTIKSDVWSFGILLTEIV 204
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 103/202 (50%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 75
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ ++ V E M + +L ++ + K QL +A Q+ G+
Sbjct: 76 VQLYAVVSEE-PIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA------QIASGMA 128
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ T R G ++ + APE
Sbjct: 129 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEXTARQGAKFPIKWTAPEAA 187
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 188 L-YGRFTIKSDVWSFGILLTEL 208
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 108/198 (54%), Gaps = 10/198 (5%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE-KCLNLREVKCLRKLNHPN 60
E L +++G G+FG V+ + +VA+K+ +++ + K L+E + L++ +HPN
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
IV++ + +K ++ V E +Q + L + + +L ++ ++ + G++Y+
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDF-LTFLRTEGARLRVKTLLQM-VGDAAAGMEYLES 231
Query: 121 QGYFHRDLKPENLLVSQ-GTIKIADFGLARE----IDAFPPYTERVGTRWYQAPEILFKS 175
+ HRDL N LV++ +KI+DFG++RE + A +V +W APE L
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW-TAPEAL-NY 289
Query: 176 GLYSSKVDMWAMGAIMAE 193
G YSS+ D+W+ G ++ E
Sbjct: 290 GRYSSESDVWSFGILLWE 307
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 136/306 (44%), Gaps = 59/306 (19%)
Query: 8 KKLGSGSFGCV-WQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLN-HPNIVKVK 65
K LG GS G V +Q G VA+K + + + L E+K L + + HPN+++
Sbjct: 39 KILGYGSSGTVVFQG--SFQGRPVAVKRMLIDFCD---IALMEIKLLTESDDHPNVIRYY 93
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKK---QKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
++ E NL L+E+K + +L E + L Q+ G+ ++H
Sbjct: 94 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK 153
Query: 123 YFHRDLKPENLLVSQGT--------------IKIADFGLAREIDA-----FPPYTERVGT 163
HRDLKP+N+LVS + I I+DFGL +++D+ GT
Sbjct: 154 IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGT 213
Query: 164 RWYQAPEILFKSG--LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPT 221
++APE+L +S + +D+++MG + Y I S P
Sbjct: 214 SGWRAPELLEESTKRRLTRSIDIFSMGCV-------------------FYYILSKGKHPF 254
Query: 222 MDSWADGLRQAMAIN--YQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEA 279
D ++ R++ I + ++ ++ +L+ A++ LI + DP KRPTA +
Sbjct: 255 GDKYS---RESNIIRGIFSLDEMKCLHDRSLIAEATD----LISQMIDHDPLKRPTAMKV 307
Query: 280 LQHPFF 285
L+HP F
Sbjct: 308 LRHPLF 313
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 14 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 72
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 73 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 130
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 131 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 189
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 190 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 228
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 229 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 268
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 111/219 (50%), Gaps = 15/219 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKL---- 56
++ + L + +G GS+ V K + + A++ +KK + ++ V+ + +
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDE-DIDWVQTEKHVFEQA 109
Query: 57 -NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
NHP +V + + +FFV E + N LM Q+Q+ E + + ++ L
Sbjct: 110 SNHPFLVGLHSCFQTESRLFFVIEYV--NGGDLM-FHMQRQRKLPEEHARFYSAEISLAL 166
Query: 116 DYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLARE-IDAFPPYTERVGTRWYQAPEILF 173
+Y+H++G +RDLK +N+L+ S+G IK+ D+G+ +E + + GT Y APEIL
Sbjct: 167 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEIL- 225
Query: 174 KSGLYSSKVDMWAMGAIMAELLLFRPLFQ---GTDEADQ 209
+ Y VD WA+G +M E++ R F +D DQ
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQ 264
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 103/209 (49%), Gaps = 12/209 (5%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL----REVKCLRKLN 57
E+Y + KLG G V+ A + VAIKA+ REK L REV +L+
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIP-PREKEETLKRFEREVHNSSQLS 69
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
H NIV + ++ E + V E ++ L E + L ++A+ + Q+ G+ +
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGP--TLSEYIESHGPLSVDTAIN-FTNQILDGIKH 126
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREID--AFPPYTERVGTRWYQAPEILFK 174
H HRD+KP+N+L+ S T+KI DFG+A+ + + +GT Y +PE K
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE-QAK 185
Query: 175 SGLYSSKVDMWAMGAIMAELLLFRPLFQG 203
D++++G ++ E+L+ P F G
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 22 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 78
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 79 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 131
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ T R G ++ + APE
Sbjct: 132 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA 190
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 191 I-NYGTFTIKSDVWSFGILLTEIV 213
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 73
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 131
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 190
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 191 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 230 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 69
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 70 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 122
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ T R G ++ + APE
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA 181
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 182 I-NYGTFTIKSDVWSFGILLTEIV 204
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 68
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWL-FQVFRGLDY 117
PN+V++ + + + + E M L++ ++ + + V ++ Q+ ++Y
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYG--NLLDYLRECNRQEVNAVVLLYMATQISSAMEY 126
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 185
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 186 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 224
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 225 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 134/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 66
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q S + Q+ ++Y
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEY 124
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + +T G ++ + APE L
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLA 183
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D + Q+Y++
Sbjct: 184 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDPS-QVYEL------------------- 222
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 223 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 68
Query: 59 PNIVKVKELIVEKGNVFFVFECMQC-NLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 69 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 126
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 185
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 186 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 224
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 225 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 70
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 128
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 129 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 187
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 188 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 226
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 227 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 31/222 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEVVAIKALK--KSYSREKCLN--LREVKCL 53
++ L K LG G+FG V A ++K V A+K KS + EK L+ + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQ-------------KQQL 98
+ + H NI+ + + G ++ + E + NL + ++A++ ++QL
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY 157
S+ V +QV RG++Y+ + HRDL N+LV++ + KIADFGLAR+I Y
Sbjct: 148 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 158 TE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R+ +W APE LF +Y+ + D+W+ G ++ E+
Sbjct: 207 KKTTNGRLPVKW-MAPEALFDR-IYTHQSDVWSFGVLLWEIF 246
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 12/200 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
M++ L + +G G FG V + + G VA+K +K + + L E + +L H N
Sbjct: 11 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQAFL--AEASVMTQLRHSN 66
Query: 61 IVKVKELIVE-KGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
+V++ +IVE KG ++ V E M + +L + + + + + + + V ++Y+
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 119 HQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
+ HRDL N+LVS+ + K++DFGL +E + T ++ +W APE L +
Sbjct: 125 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEAL-REAA 181
Query: 178 YSSKVDMWAMGAIMAELLLF 197
+S+K D+W+ G ++ E+ F
Sbjct: 182 FSTKSDVWSFGILLWEIYSF 201
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 10 LGSGSFGCVWQAVNKHSGE---VVAIKALKKSYS-REKCLNLREVKCLRKLNHPNIVKVK 65
+G+G FG V + K G+ VAIK LK Y+ R++ L E + + HPNI++++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFH 125
++ V + E M+ Q F+ + L + G+ Y+ + Y H
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQ--FTVIQLVGMLRGIASGMRYLAEMSYVH 141
Query: 126 RDLKPENLLVSQGTI-KIADFGLAR---EIDAFPPYTERVG----TRWYQAPEILFKSGL 177
RDL N+LV+ + K++DFGL+R E + P T +G RW I F+
Sbjct: 142 RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRK-- 199
Query: 178 YSSKVDMWAMGAIMAELLLF--RPLFQGTDE 206
++S D W+ G +M E++ F RP + +++
Sbjct: 200 FTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 230
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKH-SGEVVAIKALKK--SYSREKCLNLREVKCLR 54
++ +L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL-MSELKILI 85
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK--------QQLFSESA 103
+ H N+V + + G V C NL + +K+ + + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 104 VKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVG 162
+ + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P Y +
Sbjct: 146 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 163 TRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 206 ARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 240
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 31/222 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEVVAIKALK--KSYSREKCLN--LREVKCL 53
++ L K LG G+FG V A ++K V A+K KS + EK L+ + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQ-------------KQQL 98
+ + H NI+ + + G ++ + E + NL + ++A++ ++QL
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY 157
S+ V +QV RG++Y+ + HRDL N+LV++ + KIADFGLAR+I Y
Sbjct: 148 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 158 TE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R+ +W APE LF +Y+ + D+W+ G ++ E+
Sbjct: 207 KKTTNGRLPVKW-MAPEALFDR-IYTHQSDVWSFGVLLWEIF 246
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 18/211 (8%)
Query: 10 LGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPNIVKVK 65
+G+G FG V K G+ VAIK LK Y+ ++ + L E + + +HPN++ ++
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFH 125
++ + V + E M+ L +Q F+ + L + G+ Y+ Y H
Sbjct: 75 GVVTKSTPVMIITEFMENG--SLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVH 132
Query: 126 RDLKPENLLVSQGTI-KIADFGLAREID---AFPPYTERVG----TRWYQAPEILFKSGL 177
R L N+LV+ + K++DFGL+R ++ + P YT +G RW I ++
Sbjct: 133 RALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRK-- 190
Query: 178 YSSKVDMWAMGAIMAELLLF--RPLFQGTDE 206
++S D+W+ G +M E++ + RP + T++
Sbjct: 191 FTSASDVWSYGIVMWEVMSYGERPYWDMTNQ 221
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 31/222 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEVVAIKALK--KSYSREKCLN--LREVKCL 53
++ L K LG G+FG V A ++K V A+K KS + EK L+ + E++ +
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQ-------------KQQL 98
+ + H NI+ + + G ++ + E + NL + ++A++ ++QL
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY 157
S+ V +QV RG++Y+ + HRDL N+LV++ + KIADFGLAR+I Y
Sbjct: 141 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 199
Query: 158 TE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R+ +W APE LF +Y+ + D+W+ G ++ E+
Sbjct: 200 KKTTNGRLPVKW-MAPEALFDR-IYTHQSDVWSFGVLLWEIF 239
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 19 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 75
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 76 LVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 128
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ T R G ++ + APE
Sbjct: 129 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA 187
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 188 I-NYGTFTIKSDVWSFGILLTEIV 210
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 31/222 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEVVAIKALK--KSYSREKCLN--LREVKCL 53
++ L K LG G+FG V A ++K V A+K KS + EK L+ + E++ +
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQ-------------KQQL 98
+ + H NI+ + + G ++ + E + NL + ++A++ ++QL
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY 157
S+ V +QV RG++Y+ + HRDL N+LV++ + KIADFGLAR+I Y
Sbjct: 140 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 198
Query: 158 TE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R+ +W APE LF +Y+ + D+W+ G ++ E+
Sbjct: 199 KKTTNGRLPVKW-MAPEALFDR-IYTHQSDVWSFGVLLWEIF 238
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 108/204 (52%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G FG VW N H+ VA+K+LK+ L E +++L H
Sbjct: 21 ETLKLVERLGAGQFGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 77
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 78 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 130
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ T R G ++ + APE
Sbjct: 131 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-NEXTAREGAKFPIKWTAPEA 189
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 190 I-NYGTFTIKSDVWSFGILLTEIV 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 70
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 128
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 129 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 187
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 188 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 226
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 227 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 6 LTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPNI 61
+ K +G G FG V K G+ VAIK LK Y+ ++ + L E + + +HPNI
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 77
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
+ ++ ++ + V + E M+ L ++ F+ + L + G+ Y+
Sbjct: 78 IHLEGVVTKCKPVMIITEYMENG--SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 122 GYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFKS 175
Y HRDL N+LV+ + K++DFG++R ++ P YT R G RW I ++
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 176 GLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE 206
++S D+W+ G +M E++ + RP + +++
Sbjct: 196 --FTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 226
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 16/213 (7%)
Query: 6 LTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPNI 61
+ K +G G FG V K G+ VAIK LK Y+ ++ + L E + + +HPNI
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 71
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
+ ++ ++ + V + E M+ L ++ F+ + L + G+ Y+
Sbjct: 72 IHLEGVVTKCKPVMIITEYMENG--SLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 122 GYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFKS 175
Y HRDL N+LV+ + K++DFG++R ++ P YT R G RW I ++
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 176 GLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE 206
++S D+W+ G +M E++ + RP + +++
Sbjct: 190 --FTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 220
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 31/222 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEVVAIKALK--KSYSREKCLN--LREVKCL 53
++ L K LG G+FG V A ++K V A+K KS + EK L+ + E++ +
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQ-------------KQQL 98
+ + H NI+ + + G ++ + E + NL + ++A++ ++QL
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY 157
S+ V +QV RG++Y+ + HRDL N+LV++ + KIADFGLAR+I Y
Sbjct: 133 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 191
Query: 158 TE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R+ +W APE LF +Y+ + D+W+ G ++ E+
Sbjct: 192 KKTTNGRLPVKW-MAPEALFDR-IYTHQSDVWSFGVLLWEIF 231
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 108/198 (54%), Gaps = 10/198 (5%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE-KCLNLREVKCLRKLNHPN 60
E L +++G G+FG V+ + +VA+K+ +++ + K L+E + L++ +HPN
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPN 173
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
IV++ + +K ++ V E +Q + L + + +L ++ ++ + G++Y+
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDF-LTFLRTEGARLRVKTLLQM-VGDAAAGMEYLES 231
Query: 121 QGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRW----YQAPEILFKS 175
+ HRDL N LV++ +KI+DFG++RE +A Y G R + APE L
Sbjct: 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSRE-EADGVYAASGGLRQVPVKWTAPEAL-NY 289
Query: 176 GLYSSKVDMWAMGAIMAE 193
G YSS+ D+W+ G ++ E
Sbjct: 290 GRYSSESDVWSFGILLWE 307
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 110/224 (49%), Gaps = 20/224 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVN---KHSGEVVAIKALKKSYS---REKCLNLREVKCLRK 55
E+ L + +G G FG V Q + ++ VAIK K S REK L +E +R+
Sbjct: 10 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL--QEALTMRQ 67
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
+HP+IVK+ +I E V+ + E C L +L + ++ +++ + +Q+ L
Sbjct: 68 FDHPHIVKLIGVITE-NPVWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTAL 124
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG---TRWYQAPEI 171
Y+ + + HRD+ N+LVS +K+ DFGL+R ++ G +W I
Sbjct: 125 AYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESI 184
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLL--FRPLFQGTDEADQMYKI 213
F+ ++S D+W G M E+L+ +P FQG D + +I
Sbjct: 185 NFRR--FTSASDVWMFGVCMWEILMHGVKP-FQGVKNNDVIGRI 225
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 16/223 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR---EVKCLRKLNH 58
++Y L + LG G V A + VA+K L+ +R+ LR E + LNH
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 59 PNIVKV---KELIVEKGNV-FFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
P IV V E G + + V E + L + + + + A++ + +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEV-IADACQA 128
Query: 115 LDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREI----DAFPPYTERVGTRWYQAP 169
L++ HQ G HRD+KP N+L+S +K+ DFG+AR I ++ +GT Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP 188
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
E + ++ D++++G ++ E+L P F G Y+
Sbjct: 189 E-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 31/222 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEVVAIKALK--KSYSREKCLN--LREVKCL 53
++ L K LG G+FG V A ++K V A+K KS + EK L+ + E++ +
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQ-------------KQQL 98
+ + H NI+ + + G ++ + E + NL + ++A++ ++QL
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY 157
S+ V +QV RG++Y+ + HRDL N+LV++ + KIADFGLAR+I Y
Sbjct: 137 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 195
Query: 158 TE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R+ +W APE LF +Y+ + D+W+ G ++ E+
Sbjct: 196 KKTTNGRLPVKW-MAPEALFDR-IYTHQSDVWSFGVLLWEIF 235
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 110/216 (50%), Gaps = 24/216 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKH-SGEVVAIKALKK--SYSREKCLNLREVKCLR 54
++ +L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL-MSELKILI 85
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK--------QQLFSESA 103
+ H N+V + + G V C NL + +K+ + + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 104 VKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVG 162
+ + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P Y +
Sbjct: 146 LICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 163 TRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 206 ARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 240
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 144/345 (41%), Gaps = 54/345 (15%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK---SYSREKCLNLREVKCLRKLNH 58
E Y + K +G G+FG V +K S +V A+K L K + E + N
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 134
Query: 59 PNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
P +V++ + ++ V E M +L LM E K + +V LD
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD-----VPEKWAKFYTAEVVLALDA 189
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREID--AFPPYTERVGTRWYQAPEILFK 174
+H G HRD+KP+N+L+ + G +K+ADFG ++D VGT Y +PE+L
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 175 ---SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLG--SPTMDSWADGL 229
G Y + D W++G + E+L+ D + S++G S MD
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLV----------GDTPFYADSLVGTYSKIMDH----- 294
Query: 230 RQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCK--RPTAAEALQHPFFKR 287
+ ++ FP+ + + S+ A NLI + + + R E QHPFFK
Sbjct: 295 KNSLC----FPEDAEI---------SKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 341
Query: 288 CLYVPPHLRST--PAVAATRRGMLKQQGDRI-----DAEALPYPK 325
+ ++R T P V + D I D E P PK
Sbjct: 342 DQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVETFPIPK 386
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 23 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 81
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 82 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 139
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 140 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 198
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 199 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 237
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 238 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 277
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 31/222 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEVVAIKALK--KSYSREKCLN--LREVKCL 53
++ L K LG G+FG V A ++K V A+K KS + EK L+ + E++ +
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQ-------------KQQL 98
+ + H NI+ + + G ++ + E + NL + ++A++ ++QL
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 188
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY 157
S+ V +QV RG++Y+ + HRDL N+LV++ + KIADFGLAR+I Y
Sbjct: 189 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 247
Query: 158 TE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R+ +W APE LF +Y+ + D+W+ G ++ E+
Sbjct: 248 KKTTNGRLPVKW-MAPEALFDR-IYTHQSDVWSFGVLLWEIF 287
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 275
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q S + Q+ ++Y
Sbjct: 276 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEY 333
Query: 118 MHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HR+L N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 334 LEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 392
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 393 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 431
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 432 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 471
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G FG V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 8 MERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 66
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q S + Q+ ++Y
Sbjct: 67 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEY 124
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + T G ++ + APE L
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLA 183
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D + Q+Y++
Sbjct: 184 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDPS-QVYEL------------------- 222
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 223 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR---EVKCLRKLNH 58
++Y L + LG G V A + VA+K L+ +R+ LR E + LNH
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 59 PNIVKV---KELIVEKGNV-FFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
P IV V E G + + V E + L + + + + A++ + +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEV-IADACQA 128
Query: 115 LDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREI-DAFPPYTER---VGTRWYQAP 169
L++ HQ G HRD+KP N+++S +K+ DFG+AR I D+ T+ +GT Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
E + ++ D++++G ++ E+L P F G Y+
Sbjct: 189 E-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 14/218 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 15 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ C +LY + A + K F + Q RG+DY+H +
Sbjct: 72 LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK---FEMKKLIDIARQTARGMDYLHAKS 128
Query: 123 YFHRDLKPENLLVSQ-GTIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA + + G+ + APE++ S
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKIC 214
YS + D++A G ++ EL+ + + + DQ+ ++
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV 226
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 16/214 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR---EVKCLRKLNH 58
++Y L + LG G V A + VA+K L+ +R+ LR E + LNH
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 59 PNIVKV---KELIVEKGNV-FFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
P IV V E G + + V E + L + + + + A++ + +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEV-IADACQA 128
Query: 115 LDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREI-DAFPPYTER---VGTRWYQAP 169
L++ HQ G HRD+KP N+++S +K+ DFG+AR I D+ T+ +GT Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQG 203
E + ++ D++++G ++ E+L P F G
Sbjct: 189 E-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 8 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 66
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q S + Q+ ++Y
Sbjct: 67 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEY 124
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + T G ++ + APE L
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLA 183
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D + Q+Y++
Sbjct: 184 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDPS-QVYEL------------------- 222
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 223 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 262
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 31/222 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEVVAIKALK--KSYSREKCLN--LREVKCL 53
++ L K LG G+FG V A ++K V A+K KS + EK L+ + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQ-------------KQQL 98
+ + H NI+ + + G ++ + E + NL + ++A++ ++QL
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQL 147
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY 157
S+ V +QV RG++Y+ + HRDL N+LV++ + KIADFGLAR+I Y
Sbjct: 148 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY 206
Query: 158 TE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R+ +W APE LF +Y+ + D+W+ G ++ E+
Sbjct: 207 KKTTNGRLPVKW-MAPEALFDR-IYTHQSDVWSFGVLLWEIF 246
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 14/213 (6%)
Query: 6 LTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK-SYSREKCLNLR-EVKCLRKLNHPNIVK 63
L+ ++GSGSFG V++ K G+V A+K LK + E+ R EV LRK H NI+
Sbjct: 40 LSTRIGSGSFGTVYKG--KWHGDV-AVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILL 96
Query: 64 VKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGY 123
+ + C +LY+ + ++ K Q+F + Q +G+DY+H +
Sbjct: 97 FMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIAR---QTAQGMDYLHAKNI 153
Query: 124 FHRDLKPENLLVSQG-TIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF--KSGL 177
HRD+K N+ + +G T+KI DFGLA + G+ + APE++ +
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 178 YSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
+S + D+++ G ++ EL+ + + DQ+
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQI 246
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 12 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 70
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 71 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 128
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 129 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLA 187
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 188 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 226
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 227 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 266
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 69
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 70 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 127
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 128 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLA 186
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 187 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 225
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 226 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEV-VAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E+ +L K+LGSG FG V + K G+ VA+K +K+ E +E + + KL+HP
Sbjct: 8 EEITLLKELGSGQFGVV--KLGKWKGQYDVAVKMIKEGSMSEDEF-FQEAQTMMKLSHPK 64
Query: 61 IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQ 120
+VK + ++ ++ V E + L+ + + S + + V G+ ++
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGC--LLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES 122
Query: 121 QGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILFKSG 176
+ HRDL N LV + +K++DFG+ R + Y VGT++ + APE+ F
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV-LDDQYVSSVGTKFPVKWSAPEV-FHYF 180
Query: 177 LYSSKVDMWAMGAIMAELL 195
YSSK D+WA G +M E+
Sbjct: 181 KYSSKSDVWAFGILMWEVF 199
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 125/304 (41%), Gaps = 64/304 (21%)
Query: 1 MEKYSLTKK-LGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN 57
++ Y +T + LG G G V Q NK + E A+K L+ RE L+ R +C
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC----- 70
Query: 58 HPNIVKV----KELIVEKGNVFFVFECMQCN-LYQLMEAKKQKQQLFSESAVKAWLFQVF 112
P+IV++ + L + + V EC+ L+ ++ + Q F+E + +
Sbjct: 71 -PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIG 127
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS----QGTIKIADFGLAREIDAFPPYTERVGTRWYQA 168
+ Y+H HRD+KPENLL + +K+ DFG A+E G +
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKET---------TGEK---- 174
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADG 228
Y DMW++G IM LL P F Y + SP M +
Sbjct: 175 ---------YDKSCDMWSLGVIMYILLCGYPPF---------YSNHGLAISPGMKT---- 212
Query: 229 LRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPFFKRC 288
R M Y+FP + SE+ LI +L +P +R T E + HP+ +
Sbjct: 213 -RIRMG-QYEFP-------NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263
Query: 289 LYVP 292
VP
Sbjct: 264 TKVP 267
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 28/221 (12%)
Query: 6 LTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
L ++LG G+FG V+ A + +VA+K LK + + RE + L L H +
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEH 76
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLF---------Q 110
IVK + VE + VFE M+ +L + + A L +E L Q
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136
Query: 111 VFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG------T 163
+ G+ Y+ Q + HRDL N LV + +KI DFG++R++ + Y RVG
Sbjct: 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY--RVGGHTMLPI 194
Query: 164 RWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLF--RPLFQ 202
RW I+++ ++++ D+W++G ++ E+ + +P +Q
Sbjct: 195 RWMPPESIMYRK--FTTESDVWSLGVVLWEIFTYGKQPWYQ 233
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 12/200 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
M++ L + +G G FG V + + G VA+K +K + + L E + +L H N
Sbjct: 5 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQAFL--AEASVMTQLRHSN 60
Query: 61 IVKVKELIVE-KGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
+V++ +IVE KG ++ V E M + +L + ++ + + + + V ++Y+
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL 118
Query: 119 HQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
+ HRDL N+LVS+ + K++DFGL +E + T ++ +W APE L +
Sbjct: 119 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEAL-REKK 175
Query: 178 YSSKVDMWAMGAIMAELLLF 197
+S+K D+W+ G ++ E+ F
Sbjct: 176 FSTKSDVWSFGILLWEIYSF 195
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 12/200 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
M++ L + +G G FG V + + G VA+K +K + + L E + +L H N
Sbjct: 20 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQAFLA--EASVMTQLRHSN 75
Query: 61 IVKVKELIVE-KGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
+V++ +IVE KG ++ V E M + +L + ++ + + + + V ++Y+
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL 133
Query: 119 HQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
+ HRDL N+LVS+ + K++DFGL +E + T ++ +W APE L +
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEAL-REKK 190
Query: 178 YSSKVDMWAMGAIMAELLLF 197
+S+K D+W+ G ++ E+ F
Sbjct: 191 FSTKSDVWSFGILLWEIYSF 210
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR---EVKCLRKLNH 58
++Y L + LG G V A + VA+K L+ +R+ LR E + LNH
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 59 PNIVKV---KELIVEKGNV-FFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
P IV V E G + + V E + L + + + + A++ + +
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEV-IADACQA 128
Query: 115 LDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREI-DAFPPYTER---VGTRWYQAP 169
L++ HQ G HRD+KP N+++S +K+ DFG+AR I D+ T+ +GT Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
E + ++ D++++G ++ E+L P F G Y+
Sbjct: 189 E-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 105/200 (52%), Gaps = 12/200 (6%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
M++ L + +G G FG V + + G VA+K +K + + L E + +L H N
Sbjct: 192 MKELKLLQTIGKGEFGDV--MLGDYRGNKVAVKCIKNDATAQAFL--AEASVMTQLRHSN 247
Query: 61 IVKVKELIVE-KGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
+V++ +IVE KG ++ V E M + +L + ++ + + + + V ++Y+
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYL 305
Query: 119 HQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
+ HRDL N+LVS+ + K++DFGL +E + T ++ +W APE L +
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-TGKLPVKW-TAPEAL-REKK 362
Query: 178 YSSKVDMWAMGAIMAELLLF 197
+S+K D+W+ G ++ E+ F
Sbjct: 363 FSTKSDVWSFGILLWEIYSF 382
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 118/238 (49%), Gaps = 15/238 (6%)
Query: 8 KKLGSGSFGCVWQA--VNKHSGEV-VAIKALKKSYSREKC-LNLREVKCLRKLNHPNIVK 63
+ +G G FG V+ +++ + AIK+L + ++ LRE +R LNHPN++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 64 VKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGY 123
+ +++ + V C+ L++ + Q+ + + ++ QV RG++Y+ +Q +
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCH-GDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKF 145
Query: 124 FHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT------ERVGTRWYQAPEILFKSG 176
HRDL N ++ + T+K+ADFGLAR+I Y+ R+ +W + ++
Sbjct: 146 VHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL--QTY 203
Query: 177 LYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
+++K D+W+ G ++ ELL P ++ D D + + P + D L Q M
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVM 261
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR---EVKCLRKLNH 58
++Y L + LG G V A + VA+K L+ +R+ LR E + LNH
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 59 PNIVKV---KELIVEKGNV-FFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
P IV V E G + + V E + L + + + + A++ + +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEV-IADACQA 128
Query: 115 LDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREI-DAFPPYTER---VGTRWYQAP 169
L++ HQ G HRD+KP N+++S +K+ DFG+AR I D+ T+ +GT Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
E + ++ D++++G ++ E+L P F G Y+
Sbjct: 189 E-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 256 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 314
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 315 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 372
Query: 118 MHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HR+L N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 373 LEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 431
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 432 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 470
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 471 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 510
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 20/202 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
E L KLG G FG VW + V AIK LK + L+E + ++KL H +
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAF-LQEAQVMKKLRHEKL 65
Query: 62 VKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQ----QLFSESAVKAWLFQVFRGLD 116
V++ ++ E+ + V E M + +L ++ + K QL +A Q+ G+
Sbjct: 66 VQLYAVVSEE-PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA------QIASGMA 118
Query: 117 YMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYTERVGTRW---YQAPEIL 172
Y+ + Y HRDL+ N+LV + + K+ADFGLAR I+ T R G ++ + APE
Sbjct: 119 YVERMNYVHRDLRAANILVGENLVCKVADFGLARLIED-NEXTARQGAKFPIKWTAPEAA 177
Query: 173 FKSGLYSSKVDMWAMGAIMAEL 194
G ++ K D+W+ G ++ EL
Sbjct: 178 L-YGRFTIKSDVWSFGILLTEL 198
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 116/222 (52%), Gaps = 31/222 (13%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEVVAIKALK--KSYSREKCLN--LREVKCL 53
++ L K LG G+FG V A ++K V A+K KS + EK L+ + E++ +
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 54 RKLN-HPNIVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQ-------------KQQL 98
+ + H NI+ + + G ++ + E + NL + ++A++ ++QL
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLARE---IDAF 154
S+ V +QV RG++Y+ + HRDL N+LV++ + KIADFGLAR+ ID
Sbjct: 148 SSKDLVSC-AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXX 206
Query: 155 PPYTE-RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
T R+ +W APE LF +Y+ + D+W+ G ++ E+
Sbjct: 207 KKTTNGRLPVKW-MAPEALFDR-IYTHQSDVWSFGVLLWEIF 246
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 12/204 (5%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V+ V K VA+K LK+ + E L+E ++++ H
Sbjct: 29 MERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 87
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWL-FQVFRGLDY 117
PN+V++ + + + V E M L++ ++ + + V ++ Q+ ++Y
Sbjct: 88 PNLVQLLGVCTLEPPFYIVTEYMPYG--NLLDYLRECNREEVTAVVLLYMATQISSAMEY 145
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 146 LEKKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESL- 203
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF 197
+S K D+WA G ++ E+ +
Sbjct: 204 AYNTFSIKSDVWAFGVLLWEIATY 227
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 141/340 (41%), Gaps = 73/340 (21%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLN-HPNIVKVKELI 68
LG G+ G + + +V + L + +S REV+ LR+ + HPN+++
Sbjct: 32 LGHGAEGTIVYRGMFDNRDVAVKRILPECFS----FADREVQLLRESDEHPNVIRY--FC 85
Query: 69 VEKGNVF--FVFECMQCNLYQLMEAKKQKQQLFSESAVK--AWLFQVFRGLDYMHQQGYF 124
EK F E L + +E K F+ ++ L Q GL ++H
Sbjct: 86 TEKDRQFQYIAIELCAATLQEYVEQKD-----FAHLGLEPITLLQQTTSGLAHLHSLNIV 140
Query: 125 HRDLKPENLLVS----QGTIK--IADFGLAREI----DAFPPYTERVGTRWYQAPEILFK 174
HRDLKP N+L+S G IK I+DFGL +++ +F + GT + APE+L +
Sbjct: 141 HRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSE 200
Query: 175 SGLY--SSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ VD+++ G + Y + S P S RQA
Sbjct: 201 DCKENPTYTVDIFSAGCV-------------------FYYVISEGSHPFGKSLQ---RQA 238
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAI--NLIESLCSWDPCKRPTAAEALQHPFFKRCLY 290
+ L +L L P ED I LIE + + DP KRP+A L+HPFF
Sbjct: 239 NIL------LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF----- 287
Query: 291 VPPHLRSTPAVAATRRGMLKQQGDRIDAEALPYPKIVKQL 330
+ + DRI+ E+L P IVKQL
Sbjct: 288 ---------WSLEKQLQFFQDVSDRIEKESLDGP-IVKQL 317
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 11 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 69
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 70 PNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 127
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + T G ++ + APE L
Sbjct: 128 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLA 186
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 187 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 225
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 226 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 265
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 133/289 (46%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 214 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 272
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 273 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 330
Query: 118 MHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HR+L N LV + +K+ADFGL+R + YT G ++ + APE L
Sbjct: 331 LEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLA 389
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 390 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 428
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 429 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 468
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 16/223 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLR---EVKCLRKLNH 58
++Y L + LG G V A + VA+K L+ +R+ LR E + LNH
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 88
Query: 59 PNIVKV---KELIVEKGNV-FFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
P IV V E G + + V E + L + + + + A++ + +
Sbjct: 89 PAIVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPKRAIEV-IADACQA 145
Query: 115 LDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREI-DAFPPYTER---VGTRWYQAP 169
L++ HQ G HRD+KP N+++S +K+ DFG+AR I D+ T+ +GT Y +P
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 205
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
E + ++ D++++G ++ E+L P F G Y+
Sbjct: 206 E-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 247
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSG-EVVAIKALKK--SYSREKCLNLREVKCLR 54
++ L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL-MSELKILI 76
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK------------QQLF 99
+ H N+V + + G V C NL + +K+ + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 100 SESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYT 158
+ + + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P Y
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 159 ERVGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 197 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 235
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 107/204 (52%), Gaps = 22/204 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
E L ++LG+G G VW N H+ VA+K+LK+ L E +++L H
Sbjct: 13 ETLKLVERLGAGQAGEVWMGYYNGHTK--VAVKSLKQGSMSPDAF-LAEANLMKQLQHQR 69
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEA----KKQKQQLFSESAVKAWLFQVFRGL 115
+V++ ++ ++ ++ + E M+ +L ++ K +L +A Q+ G+
Sbjct: 70 LVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA------QIAEGM 122
Query: 116 DYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEI 171
++ ++ Y HRDL+ N+LVS + KIADFGLAR I+ T R G ++ + APE
Sbjct: 123 AFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED-AEXTAREGAKFPIKWTAPEA 181
Query: 172 LFKSGLYSSKVDMWAMGAIMAELL 195
+ G ++ K D+W+ G ++ E++
Sbjct: 182 I-NYGTFTIKSDVWSFGILLTEIV 204
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSG-EVVAIKALKK--SYSREKCLNLREVKCLR 54
++ L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL-MSELKILI 76
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK------------QQLF 99
+ H N+V + + G V C NL + +K+ + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 100 SESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYT 158
+ + + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P Y
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 196
Query: 159 ERVGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 197 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 235
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 132/289 (45%), Gaps = 42/289 (14%)
Query: 1 MEKYSLT--KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNH 58
ME+ +T KLG G +G V++ V K VA+K LK+ + E L+E ++++ H
Sbjct: 15 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKH 73
Query: 59 PNIVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
PN+V++ + + + + E M NL + ++ +Q + + Q+ ++Y
Sbjct: 74 PNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQISSAMEY 131
Query: 118 MHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVGTRW---YQAPEILF 173
+ ++ + HRDL N LV + +K+ADFGL+R + T G ++ + APE L
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLA 190
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF-RPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQA 232
+ +S K D+WA G ++ E+ + + G D Q+Y++
Sbjct: 191 YNK-FSIKSDVWAFGVLLWEIATYGMSPYPGID-LSQVYEL------------------- 229
Query: 233 MAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
+ +Y+ + G E L+ + W+P RP+ AE Q
Sbjct: 230 LEKDYRMERPEG---------CPEKVYELMRACWQWNPSDRPSFAEIHQ 269
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 111/222 (50%), Gaps = 34/222 (15%)
Query: 6 LTKKLGSGSFGCVWQAVNKH-----SGEVVAIKALKKSYSREKCLNL-REVKCLRKLNHP 59
L K LG G FG V +A H VA+K LK++ S + +L E L+++NHP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 60 NIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKK-------------------QKQQL 98
+++K+ + G + + E + + L E++K ++
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPY 157
+ + ++ +Q+ +G+ Y+ + HRDL N+LV++G +KI+DFGL+R++ Y
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 158 TE----RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R+ +W A E LF +Y+++ D+W+ G ++ E++
Sbjct: 207 VKRSQGRIPVKW-MAIESLFDH-IYTTQSDVWSFGVLLWEIV 246
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSG-EVVAIKALKK--SYSREKCLNLREVKCLR 54
++ L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL-MSELKILI 122
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK------------QQLF 99
+ H N+V + + G V C NL + +K+ + +
Sbjct: 123 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182
Query: 100 SESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYT 158
+ + + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P Y
Sbjct: 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 242
Query: 159 ERVGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 243 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 281
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSG-EVVAIKALKK--SYSREKCLNLREVKCLR 54
++ L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL-MSELKILI 85
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK------------QQLF 99
+ H N+V + + G V C NL + +K+ + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 100 SESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYT 158
+ + + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P Y
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 205
Query: 159 ERVGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 206 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 244
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 104/205 (50%), Gaps = 17/205 (8%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKL-NHPNIV 62
+ L + +G+G++G V++ + +G++ AIK + + E+ + +E+ L+K +H NI
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK-QEINMLKKYSHHRNIA 84
Query: 63 KVKELIVEKG------NVFFVFE-CMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
++K ++ V E C ++ L+ K K E + ++ RGL
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREILRGL 142
Query: 116 DYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREID-AFPPYTERVGTRWYQAPEILF 173
++HQ HRD+K +N+L+++ +K+ DFG++ ++D +GT ++ APE++
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIA 202
Query: 174 ----KSGLYSSKVDMWAMGAIMAEL 194
Y K D+W++G E+
Sbjct: 203 CDENPDATYDFKSDLWSLGITAIEM 227
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 101/241 (41%), Gaps = 60/241 (24%)
Query: 104 VKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTIKIA--DFGLAR-------EIDAF 154
V+ ++ +F+ L +HQ G HRD+KP N L ++ K A DFGLA+ E+ F
Sbjct: 119 VREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKF 178
Query: 155 ----------------------PPYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMA 192
R GT ++APE+L K ++ +DMW+ G I
Sbjct: 179 VQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238
Query: 193 ELLLFR-PLFQGTDEADQMYKICSVLGSPTMDSWADGLRQAMAINYQFP---------QL 242
LL R P ++ +D+ + +I ++ GS A +++ + + P +L
Sbjct: 239 SLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERL 298
Query: 243 SGVNLSALMPSASEDAINLIESLCSW-----------------DPCKRPTAAEALQHPFF 285
G++ S P + D +L W +P R TA EAL HPFF
Sbjct: 299 RGMDSST--PKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356
Query: 286 K 286
K
Sbjct: 357 K 357
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSG-EVVAIKALKK--SYSREKCLNLREVKCLR 54
++ L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL-MSELKILI 87
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK------------QQLF 99
+ H N+V + + G V C NL + +K+ + +
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 100 SESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYT 158
+ + + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P Y
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV 207
Query: 159 ERVGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 208 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 246
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 104/198 (52%), Gaps = 14/198 (7%)
Query: 9 KLGSGSFGCVWQAVNKHSGEV--VAIKALKKSYSREKCLNL-REVKCLRKLNHPNIVKVK 65
+LG G+FG V Q V + + VAIK LK+ + + RE + + +L++P IV++
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFH 125
+ + + + L++ + K+++ S V L QV G+ Y+ ++ + H
Sbjct: 77 GVCQAEALMLVMEMAGGGPLHKFLVGKREE---IPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 126 RDLKPEN-LLVSQGTIKIADFGLAREIDAFPP-YTERVGTRW---YQAPE-ILFKSGLYS 179
RDL N LLV++ KI+DFGL++ + A YT R +W + APE I F+ +S
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK--FS 191
Query: 180 SKVDMWAMGAIMAELLLF 197
S+ D+W+ G M E L +
Sbjct: 192 SRSDVWSYGVTMWEALSY 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 108/218 (49%), Gaps = 26/218 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKH-SGEVVAIKALKK--SYSREKCLNLREVKCLR 54
++ L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRAL-MSELKILI 87
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK----------QQLFSE 101
+ H N+V + + G V C NL + +K+ + + +
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 102 SAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTER 160
+ + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P +
Sbjct: 148 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 161 VGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 208 GDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 244
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 6 LTKKLGSGSFGCVWQAVNKHSGE---VVAIKALKKSYSREKCLN-LREVKCLRKLNHPNI 61
+ K +G G FG V K G+ VAIK LK Y+ ++ + L E + + +HPNI
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNI 92
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
+ ++ ++ + V + E M+ K + F+ + L + G+ Y+
Sbjct: 93 IHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR--FTVIQLVGMLRGIGSGMKYLSDM 150
Query: 122 GYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFP--PYTERVG---TRWYQAPEILFKS 175
HRDL N+LV+ + K++DFG++R ++ P YT R G RW I ++
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 176 GLYSSKVDMWAMGAIMAELLLF--RPLFQGTDE 206
++S D+W+ G +M E++ + RP + +++
Sbjct: 211 --FTSASDVWSYGIVMWEVMSYGERPYWDMSNQ 241
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 105/198 (53%), Gaps = 14/198 (7%)
Query: 9 KLGSGSFGCVWQAVNKHSGEV--VAIKALKKSYSREKCLNL-REVKCLRKLNHPNIVKVK 65
+LG G+FG V Q V + + VAIK LK+ + + RE + + +L++P IV++
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYFH 125
+ + + + L++ + K+++ + S V L QV G+ Y+ ++ + H
Sbjct: 403 GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPV---SNVAELLHQVSMGMKYLEEKNFVH 459
Query: 126 RDLKPEN-LLVSQGTIKIADFGLAREIDAFPP-YTERVGTRW---YQAPE-ILFKSGLYS 179
R+L N LLV++ KI+DFGL++ + A YT R +W + APE I F+ +S
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK--FS 517
Query: 180 SKVDMWAMGAIMAELLLF 197
S+ D+W+ G M E L +
Sbjct: 518 SRSDVWSYGVTMWEALSY 535
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 109/219 (49%), Gaps = 27/219 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSG-EVVAIKALKK--SYSREKCLNLREVKCLR 54
++ +L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL-MSELKILI 86
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK-----------QQLFS 100
+ H N+V + + G V C NL + +K+ + + +
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 101 ESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTE 159
+ + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVR 206
Query: 160 RVGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 207 KGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 244
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 113/222 (50%), Gaps = 34/222 (15%)
Query: 6 LTKKLGSGSFGCVWQAVNKH-----SGEVVAIKALKKSYSREKCLNL-REVKCLRKLNHP 59
L K LG G FG V +A H VA+K LK++ S + +L E L+++NHP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 60 NIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKK-------------------QKQQL 98
+++K+ + G + + E + + L E++K ++
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREI---DAF 154
+ + ++ +Q+ +G+ Y+ + HRDL N+LV++G +KI+DFGL+R++ D+
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 155 PPYTE-RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
++ R+ +W A E LF +Y+++ D+W+ G ++ E++
Sbjct: 207 VKRSQGRIPVKW-MAIESLFDH-IYTTQSDVWSFGVLLWEIV 246
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L A L S K
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 144
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER----VGT 163
++ G+ Y++ + HRDL N +V++ T+KI DFG+ R+I Y + +
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 164 RWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 205 RW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 233
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 94/197 (47%), Gaps = 9/197 (4%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYS--REKCLNLREVKCLRKLN-H 58
+ + +LG GS+G V++ +K G + A+K + +++ L EV K+ H
Sbjct: 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQH 116
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
P V++++ E G ++ E +L Q EA E+ V +L L ++
Sbjct: 117 PCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGAS---LPEAQVWGYLRDTLLALAHL 173
Query: 119 HQQGYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGL 177
H QG H D+KP N+ + +G K+ DFGL E+ + G Y APE+L G
Sbjct: 174 HSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELL--QGS 231
Query: 178 YSSKVDMWAMGAIMAEL 194
Y + D++++G + E+
Sbjct: 232 YGTAADVFSLGLTILEV 248
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 11 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ C +LY + + K ++ + Q +G+DY+H +
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYLHAKS 124
Query: 123 YFHRDLKPENLLVSQG-TIKIADFGLAREIDAFP---PYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA E + + + G+ + APE++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
YS + D++A G ++ EL+ + + + DQ+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 62/310 (20%)
Query: 2 EKYSLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKS-YSREKCLNLREVKCLRK 55
+ S K LG+G+FG V +A + + VA+K LK S + E+ + E+K L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 56 L-NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVK--------- 105
L NH NIV + G + E C L+ ++K+ F S
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITE--YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 106 --------AWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
++ +QV +G+ ++ + HRDL N+L++ G I KI DFGLAR+I
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 200
Query: 157 Y----TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
Y R+ +W APE +F +Y+ + D+W+ G + EL
Sbjct: 201 YVVKGNARLPVKW-MAPESIFNC-VYTFESDVWSYGIFLWELF----------------- 241
Query: 213 ICSVLGSPTMDSWADGLRQAMAINYQFPQLSGVNLSALMPS-ASEDAINLIESLCSWDPC 271
S+ SP M ++ +F ++ L P A + +++++ DP
Sbjct: 242 --SLGSSP---------YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPL 290
Query: 272 KRPTAAEALQ 281
KRPT + +Q
Sbjct: 291 KRPTFKQIVQ 300
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 30/220 (13%)
Query: 9 KLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVK 63
+LG G+FG V+ A + + +VA+KALK++ + RE + L L H +IV+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 64 VKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESA-----------VKAWLFQV 111
+ E + VFE M+ +L + + + +L + + A QV
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG------TR 164
G+ Y+ + HRDL N LV QG +KI DFG++R+I + Y RVG R
Sbjct: 168 AAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY--RVGGRTMLPIR 225
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELLLF--RPLFQ 202
W IL++ ++++ D+W+ G ++ E+ + +P +Q
Sbjct: 226 WMPPESILYRK--FTTESDVWSFGVVLWEIFTYGKQPWYQ 263
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 31 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 87
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ C +LY + + K ++ + Q +G+DY+H +
Sbjct: 88 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYLHAKS 144
Query: 123 YFHRDLKPENLLVSQG-TIKIADFGLAREIDAFP---PYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA E + + + G+ + APE++
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
YS + D++A G ++ EL+ + + + DQ+
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 238
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 30/223 (13%)
Query: 6 LTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
L +LG G+FG V+ A + + +VA+KALK++ + RE + L L H +
Sbjct: 16 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 75
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESA-----------VKAWL 108
IV+ + E + VFE M+ +L + + + +L + + A
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 135
Query: 109 FQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG----- 162
QV G+ Y+ + HRDL N LV QG +KI DFG++R+I + Y RVG
Sbjct: 136 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY--RVGGRTML 193
Query: 163 -TRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLF--RPLFQ 202
RW IL++ ++++ D+W+ G ++ E+ + +P +Q
Sbjct: 194 PIRWMPPESILYRK--FTTESDVWSFGVVLWEIFTYGKQPWYQ 234
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 62/310 (20%)
Query: 2 EKYSLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKS-YSREKCLNLREVKCLRK 55
+ S K LG+G+FG V +A + + VA+K LK S + E+ + E+K L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 56 L-NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVK--------- 105
L NH NIV + G + E C L+ ++K+ F S
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITE--YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 106 --------AWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
++ +QV +G+ ++ + HRDL N+L++ G I KI DFGLAR+I
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 223
Query: 157 Y----TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
Y R+ +W APE +F +Y+ + D+W+ G + EL
Sbjct: 224 YVVKGNARLPVKW-MAPESIFNC-VYTFESDVWSYGIFLWELF----------------- 264
Query: 213 ICSVLGSPTMDSWADGLRQAMAINYQFPQLSGVNLSALMPS-ASEDAINLIESLCSWDPC 271
S+ SP M ++ +F ++ L P A + +++++ DP
Sbjct: 265 --SLGSSP---------YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPL 313
Query: 272 KRPTAAEALQ 281
KRPT + +Q
Sbjct: 314 KRPTFKQIVQ 323
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 15 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 74
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L A L S K
Sbjct: 75 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA 134
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER----VGT 163
++ G+ Y++ + HRDL N +V++ T+KI DFG+ R+I Y + +
Sbjct: 135 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 194
Query: 164 RWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 195 RW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 223
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 8 KKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSYSRE-KCLNLREVKCLRKLNHPNIV 62
+ LG G FG V + N +GE+VA+KALK+ + + RE++ LR L H +IV
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 73
Query: 63 KVKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLF--QVFRGLDYM 118
K K ++G +V V E Y + + + + LF Q+ G+ Y+
Sbjct: 74 KYKGCCEDQGEKSVQLVME------YVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYL 127
Query: 119 HQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTR--------WYQAP 169
H Q Y HR L N+L+ +KI DFGLA+ A P E R WY AP
Sbjct: 128 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWY-AP 183
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLF 197
E L + Y + D+W+ G + ELL +
Sbjct: 184 ECLKECKFYYAS-DVWSFGVTLYELLTY 210
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSG-EVVAIKALKK--SYSREKCLNLREVKCLR 54
++ L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL-MSELKILI 76
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK------------QQLF 99
+ H N+V + + G V C NL + +K+ + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 100 SESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYT 158
+ + + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 159 ERVGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 197 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 235
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 62/310 (20%)
Query: 2 EKYSLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKS-YSREKCLNLREVKCLRK 55
+ S K LG+G+FG V +A + + VA+K LK S + E+ + E+K L
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 56 L-NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVK--------- 105
L NH NIV + G + E C L+ ++K+ F S
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITE--YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 156
Query: 106 --------AWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
++ +QV +G+ ++ + HRDL N+L++ G I KI DFGLAR+I
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 216
Query: 157 Y----TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
Y R+ +W APE +F +Y+ + D+W+ G + EL
Sbjct: 217 YVVKGNARLPVKW-MAPESIFNC-VYTFESDVWSYGIFLWELF----------------- 257
Query: 213 ICSVLGSPTMDSWADGLRQAMAINYQFPQLSGVNLSALMPS-ASEDAINLIESLCSWDPC 271
S+ SP M ++ +F ++ L P A + +++++ DP
Sbjct: 258 --SLGSSP---------YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPL 306
Query: 272 KRPTAAEALQ 281
KRPT + +Q
Sbjct: 307 KRPTFKQIVQ 316
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 108/223 (48%), Gaps = 30/223 (13%)
Query: 6 LTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
L +LG G+FG V+ A + + +VA+KALK++ + RE + L L H +
Sbjct: 22 LKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQH 81
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAKKQKQQLFSESA-----------VKAWL 108
IV+ + E + VFE M+ +L + + + +L + + A
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 141
Query: 109 FQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG----- 162
QV G+ Y+ + HRDL N LV QG +KI DFG++R+I + Y RVG
Sbjct: 142 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY--RVGGRTML 199
Query: 163 -TRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLF--RPLFQ 202
RW IL++ ++++ D+W+ G ++ E+ + +P +Q
Sbjct: 200 PIRWMPPESILYRK--FTTESDVWSFGVVLWEIFTYGKQPWYQ 240
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 98/208 (47%), Gaps = 29/208 (13%)
Query: 8 KKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSYSRE-KCLNLREVKCLRKLNHPNIV 62
+ LG G FG V + N +GE+VA+KALK+ + + RE++ LR L H +IV
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIV 74
Query: 63 KVKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLF--QVFRGLDYM 118
K K ++G +V V E Y + + + + LF Q+ G+ Y+
Sbjct: 75 KYKGCCEDQGEKSVQLVME------YVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYL 128
Query: 119 HQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTR--------WYQAP 169
H Q Y HR L N+L+ +KI DFGLA+ A P E R WY AP
Sbjct: 129 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWY-AP 184
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELLLF 197
E L + Y + D+W+ G + ELL +
Sbjct: 185 ECLKECKFYYAS-DVWSFGVTLYELLTY 211
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 15/196 (7%)
Query: 9 KLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREK----CLNLREVKCLRKLNHPNIVKV 64
++GSG+ G VW+ + +G V+A+K +++S ++E+ ++L V L+ + P IV+
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVV--LKSHDCPYIVQC 89
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ-GY 123
+ +VF E M +L KK+ Q E + + + L Y+ ++ G
Sbjct: 90 FGTFITNTDVFIAMELMGTCAEKL---KKRMQGPIPERILGKMTVAIVKALYYLKEKHGV 146
Query: 124 FHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILF----KSGLY 178
HRD+KP N+L+ + G IK+ DFG++ + G Y APE + Y
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDY 206
Query: 179 SSKVDMWAMGAIMAEL 194
+ D+W++G + EL
Sbjct: 207 DIRADVWSLGISLVEL 222
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 132/310 (42%), Gaps = 62/310 (20%)
Query: 2 EKYSLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKS-YSREKCLNLREVKCLRK 55
+ S K LG+G+FG V +A + + VA+K LK S + E+ + E+K L
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 56 L-NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVK--------- 105
L NH NIV + G + E C L+ ++K+ F S
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITE--YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 158
Query: 106 --------AWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
++ +QV +G+ ++ + HRDL N+L++ G I KI DFGLAR+I
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN 218
Query: 157 Y----TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
Y R+ +W APE +F +Y+ + D+W+ G + EL
Sbjct: 219 YVVKGNARLPVKW-MAPESIFNC-VYTFESDVWSYGIFLWELF----------------- 259
Query: 213 ICSVLGSPTMDSWADGLRQAMAINYQFPQLSGVNLSALMPS-ASEDAINLIESLCSWDPC 271
S+ SP M ++ +F ++ L P A + +++++ DP
Sbjct: 260 --SLGSSP---------YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPL 308
Query: 272 KRPTAAEALQ 281
KRPT + +Q
Sbjct: 309 KRPTFKQIVQ 318
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 113/222 (50%), Gaps = 34/222 (15%)
Query: 6 LTKKLGSGSFGCVWQAVNKH-----SGEVVAIKALKKSYSREKCLNL-REVKCLRKLNHP 59
L K LG G FG V +A H VA+K LK++ S + +L E L+++NHP
Sbjct: 27 LGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHP 86
Query: 60 NIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKK-------------------QKQQL 98
+++K+ + G + + E + + L E++K ++
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 99 FSESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREI---DAF 154
+ + ++ +Q+ +G+ Y+ + HRDL N+LV++G +KI+DFGL+R++ D+
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 155 PPYTE-RVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
++ R+ +W A E LF +Y+++ D+W+ G ++ E++
Sbjct: 207 VKRSQGRIPVKW-MAIESLFDH-IYTTQSDVWSFGVLLWEIV 246
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 14/214 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 39 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ C +LY + + K ++ + Q +G+DY+H +
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYLHAKS 152
Query: 123 YFHRDLKPENLLVSQG-TIKIADFGLAREIDAFP---PYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA E + + + G+ + APE++
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
YS + D++A G ++ EL+ + + + DQ+
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSG-EVVAIKALKK--SYSREKCLNLREVKCLR 54
++ L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL-MSELKILI 85
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK------------QQLF 99
+ H N+V + + G V C NL + +K+ + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 100 SESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYT 158
+ + + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 205
Query: 159 ERVGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 206 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 244
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 131/310 (42%), Gaps = 62/310 (20%)
Query: 2 EKYSLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKS-YSREKCLNLREVKCLRK 55
+ S K LG+G+FG V +A + + VA+K LK S + E+ + E+K L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 56 L-NHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVK--------- 105
L NH NIV + G + E C L+ ++K+ F S
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITE--YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 106 --------AWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPP 156
++ +QV +G+ ++ + HRDL N+L++ G I KI DFGLAR I
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSN 223
Query: 157 Y----TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
Y R+ +W APE +F +Y+ + D+W+ G + EL
Sbjct: 224 YVVKGNARLPVKW-MAPESIFNC-VYTFESDVWSYGIFLWELF----------------- 264
Query: 213 ICSVLGSPTMDSWADGLRQAMAINYQFPQLSGVNLSALMPS-ASEDAINLIESLCSWDPC 271
S+ SP M ++ +F ++ L P A + +++++ DP
Sbjct: 265 --SLGSSP---------YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPL 313
Query: 272 KRPTAAEALQ 281
KRPT + +Q
Sbjct: 314 KRPTFKQIVQ 323
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 25/216 (11%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCL----RKLNHPN----I 61
LG GSFG V + K + E+ A+K LKK + +V+C R L P +
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDV----VIQDDDVECTMVEKRVLALPGKPPFL 404
Query: 62 VKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
++ ++FV E + +Y + + + F E + ++ GL ++
Sbjct: 405 TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-----FKEPHAVFYAAEIAIGLFFLQ 459
Query: 120 QQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTER--VGTRWYQAPEILFKSG 176
+G +RDLK +N+++ S+G IKIADFG+ +E + + T + GT Y APEI+
Sbjct: 460 SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
Y VD WA G ++ E+L + F+G DE D++++
Sbjct: 519 -YGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQ 552
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 25/225 (11%)
Query: 1 MEKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCL----RKL 56
+ ++ LG GSFG V + K + E+ A+K LKK + + +V+C R L
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKK----DVVIQDDDVECTMVEKRVL 74
Query: 57 NHPN----IVKVKELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQ 110
P + ++ ++FV E + +Y + + + F E + +
Sbjct: 75 ALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-----FKEPHAVFYAAE 129
Query: 111 VFRGLDYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERV--GTRWYQ 167
+ GL ++ +G +RDLK +N+++ S+G IKIADFG+ +E + + T + GT Y
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKE-NIWDGVTTKXFCGTPDYI 188
Query: 168 APEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYK 212
APEI+ Y VD WA G ++ E+L + F+G DE D++++
Sbjct: 189 APEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQ 231
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 51/306 (16%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ Y +KLG G F V H G A+K + +++ RE R NHPNI
Sbjct: 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNI 88
Query: 62 VK-VKELIVEKGNVFFVFECM----QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
++ V + E+G + + + L+ +E K K +E + L + RGL+
Sbjct: 89 LRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLE 148
Query: 117 YMHQQGYFHRDLKPENLLVS-QGTIKIADFGL----------AREIDAFPPYTERVGTRW 165
+H +GY HRDLKP N+L+ +G + D G +R+ + + T
Sbjct: 149 AIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTIS 208
Query: 166 YQAPEILFKSG--LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMD 223
Y+APE+ + + D+W++G ++ ++ G D +++ D
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF------GEGPYDMVFQ--------KGD 254
Query: 224 SWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRP------TAA 277
S A ++ ++I PQ P S L+ S+ + DP +RP +
Sbjct: 255 SVALAVQNQLSI----PQ---------SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQL 301
Query: 278 EALQHP 283
EALQ P
Sbjct: 302 EALQPP 307
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 84
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L + L S K
Sbjct: 85 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 144
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER----VGT 163
++ G+ Y++ + HRDL N +V++ T+KI DFG+ R+I Y + +
Sbjct: 145 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 204
Query: 164 RWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 205 RW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 233
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 95/206 (46%), Gaps = 29/206 (14%)
Query: 8 KKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHPNIV 62
+ LG G FG V + N +GE+VA+KALK + + E+ LR L H +I+
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 63 KVKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLF--QVFRGLDYM 118
K K + G ++ V E Y + + + S + LF Q+ G+ Y+
Sbjct: 97 KYKGCCEDAGAASLQLVME------YVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYL 150
Query: 119 HQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTR--------WYQAP 169
H Q Y HRDL N+L+ +KI DFGLA+ A P E R WY AP
Sbjct: 151 HAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK---AVPEGHEXYRVREDGDSPVFWY-AP 206
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELL 195
E L + Y + D+W+ G + ELL
Sbjct: 207 ECLKEYKFYYAS-DVWSFGVTLYELL 231
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSG-EVVAIKALKK--SYSREKCLNLREVKCLR 54
++ L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL-MSELKILI 76
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK------------QQLF 99
+ H N+V + + G V C NL + +K+ + +
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 100 SESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYT 158
+ + + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXV 196
Query: 159 ERVGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 197 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L + L S K
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER----VGT 163
++ G+ Y++ + HRDL N +V++ T+KI DFG+ R+I Y + +
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 164 RWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 198 RW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 226
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 108/220 (49%), Gaps = 28/220 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSG-EVVAIKALKK--SYSREKCLNLREVKCLR 54
++ L K LG G+FG V +A ++K + VA+K LK+ ++S + L + E+K L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRAL-MSELKILI 85
Query: 55 KLNHP-NIVKVKELIVEKGNVFFVFE--CMQCNLYQLMEAKKQK------------QQLF 99
+ H N+V + + G V C NL + +K+ + +
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 100 SESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYT 158
+ + + FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXV 205
Query: 159 ERVGTRW---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ R + APE +F +Y+ + D+W+ G ++ E+
Sbjct: 206 RKGDARLPLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 244
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L + L S K
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER----VGT 163
++ G+ Y++ + HRDL N +V++ T+KI DFG+ R+I Y + +
Sbjct: 132 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 164 RWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 192 RW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 57/304 (18%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPN- 60
YS+ K++GSG V+Q +N+ ++ AIK + + + L+ E+ L KL +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 61 -IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
I+++ + + ++ V EC +L ++ KK K++ + + +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIH 172
Query: 120 QQGYFHRDLKPENLLVSQGTIKIADFGLAREIDAFPPYT-----ERVGTRWYQAPEILFK 174
Q G H DLKP N L+ G +K+ DFG+A ++ P T +VGT Y PE +
Sbjct: 173 QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI-- 228
Query: 175 SGLYSSK------------VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTM 222
+ SS+ D+W++G I+ + + FQ +Q+ K+ +++ P
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAII-DPNH 285
Query: 223 DSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQH 282
+ +FP + +D ++++ DP +R + E L H
Sbjct: 286 E-------------IEFPDI-----------PEKDLQDVLKCCLKRDPKQRISIPELLAH 321
Query: 283 PFFK 286
P+ +
Sbjct: 322 PYVQ 325
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L + L S K
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER----VGT 163
++ G+ Y++ + HRDL N +V++ T+KI DFG+ R+I Y + +
Sbjct: 139 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 198
Query: 164 RWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 199 RW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 227
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 18 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 77
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L + L S K
Sbjct: 78 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 137
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER----VGT 163
++ G+ Y++ + HRDL N +V++ T+KI DFG+ R+I Y + +
Sbjct: 138 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 197
Query: 164 RWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 198 RW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 226
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 16 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 75
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L + L S K
Sbjct: 76 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 135
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER----VGT 163
++ G+ Y++ + HRDL N +V++ T+KI DFG+ R+I Y + +
Sbjct: 136 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 195
Query: 164 RWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 196 RW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 224
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 57/304 (18%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPN- 60
YS+ K++GSG V+Q +N+ ++ AIK + + + L+ E+ L KL +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 61 -IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
I+++ + + ++ V EC +L ++ KK K++ + + +H
Sbjct: 73 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIH 128
Query: 120 QQGYFHRDLKPENLLVSQGTIKIADFGLAREIDAFPPYT-----ERVGTRWYQAPEILFK 174
Q G H DLKP N L+ G +K+ DFG+A ++ P T +VGT Y PE +
Sbjct: 129 QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI-- 184
Query: 175 SGLYSSK------------VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTM 222
+ SS+ D+W++G I+ + + FQ +Q+ K+ +++ P
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAII-DPNH 241
Query: 223 DSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQH 282
+ +FP + +D ++++ DP +R + E L H
Sbjct: 242 E-------------IEFPDI-----------PEKDLQDVLKCCLKRDPKQRISIPELLAH 277
Query: 283 PFFK 286
P+ +
Sbjct: 278 PYVQ 281
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 20/211 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 47 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 106
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L + L S K
Sbjct: 107 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 166
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER----VGT 163
++ G+ Y++ + HRDL N +V++ T+KI DFG+ R+I Y + +
Sbjct: 167 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 226
Query: 164 RWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 227 RW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 255
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 57/304 (18%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPN- 60
YS+ K++GSG V+Q +N+ ++ AIK + + + L+ E+ L KL +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 61 -IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
I+++ + + ++ V EC +L ++ KK K++ + + +H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIH 144
Query: 120 QQGYFHRDLKPENLLVSQGTIKIADFGLAREIDAFPPYT-----ERVGTRWYQAPEILFK 174
Q G H DLKP N L+ G +K+ DFG+A ++ P T +VGT Y PE +
Sbjct: 145 QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI-- 200
Query: 175 SGLYSSK------------VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTM 222
+ SS+ D+W++G I+ + + FQ +Q+ K+ +++ P
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAII-DPNH 257
Query: 223 DSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQH 282
+ +FP + +D ++++ DP +R + E L H
Sbjct: 258 E-------------IEFPDI-----------PEKDLQDVLKCCLKRDPKQRISIPELLAH 293
Query: 283 PFFK 286
P+ +
Sbjct: 294 PYVQ 297
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 57/304 (18%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPN- 60
YS+ K++GSG V+Q +N+ ++ AIK + + + L+ E+ L KL +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 61 -IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
I+++ + + ++ V EC +L ++ KK K++ + + +H
Sbjct: 69 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIH 124
Query: 120 QQGYFHRDLKPENLLVSQGTIKIADFGLAREIDAFPPYT-----ERVGTRWYQAPEILFK 174
Q G H DLKP N L+ G +K+ DFG+A ++ P T +VGT Y PE +
Sbjct: 125 QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI-- 180
Query: 175 SGLYSSK------------VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTM 222
+ SS+ D+W++G I+ + + FQ +Q+ K+ +++ P
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAII-DPNH 237
Query: 223 DSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQH 282
+ +FP + +D ++++ DP +R + E L H
Sbjct: 238 E-------------IEFPDI-----------PEKDLQDVLKCCLKRDPKQRISIPELLAH 273
Query: 283 PFFK 286
P+ +
Sbjct: 274 PYVQ 277
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 57/304 (18%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPN- 60
YS+ K++GSG V+Q +N+ ++ AIK + + + L+ E+ L KL +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 61 -IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
I+++ + + ++ V EC +L ++ KK K++ + + +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIH 172
Query: 120 QQGYFHRDLKPENLLVSQGTIKIADFGLAREIDAFPPYT-----ERVGTRWYQAPEILFK 174
Q G H DLKP N L+ G +K+ DFG+A ++ P T +VGT Y PE +
Sbjct: 173 QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI-- 228
Query: 175 SGLYSSK------------VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTM 222
+ SS+ D+W++G I+ + + FQ +Q+ K+ +++ P
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAII-DPNH 285
Query: 223 DSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQH 282
+ +FP + +D ++++ DP +R + E L H
Sbjct: 286 E-------------IEFPDI-----------PEKDLQDVLKCCLKRDPKQRISIPELLAH 321
Query: 283 PFFK 286
P+ +
Sbjct: 322 PYVQ 325
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 8 KKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHPNIV 62
+ LG G FG V + N +GE+VA+KALK + + E+ LR L H +I+
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 63 KVKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLF--QVFRGLDYM 118
K K ++G ++ V E Y + + + S + LF Q+ G+ Y+
Sbjct: 80 KYKGCCEDQGEKSLQLVME------YVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYL 133
Query: 119 HQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTR--------WYQAP 169
H Q Y HR+L N+L+ +KI DFGLA+ A P E R WY AP
Sbjct: 134 HSQHYIHRNLAARNVLLDNDRLVKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWY-AP 189
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELL 195
E L + Y + D+W+ G + ELL
Sbjct: 190 ECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 9 KLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKV 64
+LG G+FG C + + ++G +VA+K L+ S ++ RE++ L+ L+ IVK
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 65 KELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ + G + V E + L + ++ + S + + Q+ +G++Y+ +
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGC--LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 123 YFHRDLKPENLLV-SQGTIKIADFGLAR--EIDAFPPYTERVGTR---WYQAPEILFKSG 176
HRDL N+LV S+ +KIADFGLA+ +D G WY APE L
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWY-APESL-SDN 189
Query: 177 LYSSKVDMWAMGAIMAELLLF 197
++S + D+W+ G ++ EL +
Sbjct: 190 IFSRQSDVWSFGVVLYELFTY 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 11 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ C +LY + + K ++ + Q +G+DY+H +
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYLHAKS 124
Query: 123 YFHRDLKPENLLVSQG-TIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA + + G+ + APE++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
YS + D++A G ++ EL+ + + + DQ+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 13 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ C +LY + + K ++ + Q +G+DY+H +
Sbjct: 70 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYLHAKS 126
Query: 123 YFHRDLKPENLLVSQG-TIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA + + G+ + APE++
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
YS + D++A G ++ EL+ + + + DQ+
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 220
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 96/206 (46%), Gaps = 29/206 (14%)
Query: 8 KKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSYSREKCLNLR-EVKCLRKLNHPNIV 62
+ LG G FG V + N +GE+VA+KALK + + E+ LR L H +I+
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 63 KVKELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLF--QVFRGLDYM 118
K K ++G ++ V E Y + + + S + LF Q+ G+ Y+
Sbjct: 80 KYKGCCEDQGEKSLQLVME------YVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYL 133
Query: 119 HQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTR--------WYQAP 169
H Q Y HR+L N+L+ +KI DFGLA+ A P E R WY AP
Sbjct: 134 HAQHYIHRNLAARNVLLDNDRLVKIGDFGLAK---AVPEGHEYYRVREDGDSPVFWY-AP 189
Query: 170 EILFKSGLYSSKVDMWAMGAIMAELL 195
E L + Y + D+W+ G + ELL
Sbjct: 190 ECLKEYKFYYAS-DVWSFGVTLYELL 214
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 16 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ C +LY + + K ++ + Q +G+DY+H +
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYLHAKS 129
Query: 123 YFHRDLKPENLLVSQG-TIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA + + G+ + APE++
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
YS + D++A G ++ EL+ + + + DQ+
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 9 KLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKV 64
+LG G+FG C + + ++G +VA+K L+ S ++ RE++ L+ L+ IVK
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 65 KELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ + G ++ V E + L + ++ + S + + Q+ +G++Y+ +
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGC--LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 123 YFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPY--TERVGTR---WYQAPEILFKSG 176
HRDL N+LV S+ +KIADFGLA+ + Y G WY APE L
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESL-SDN 192
Query: 177 LYSSKVDMWAMGAIMAELLLF 197
++S + D+W+ G ++ EL +
Sbjct: 193 IFSRQSDVWSFGVVLYELFTY 213
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 57/304 (18%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPN- 60
YS+ K++GSG V+Q +N+ ++ AIK + + + L+ E+ L KL +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 61 -IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
I+++ + + ++ V EC +L ++ KK K++ + + +H
Sbjct: 70 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIH 125
Query: 120 QQGYFHRDLKPENLLVSQGTIKIADFGLAREIDAFPPYT-----ERVGTRWYQAPEILFK 174
Q G H DLKP N L+ G +K+ DFG+A ++ P T +VGT Y PE +
Sbjct: 126 QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGTVNYMPPEAI-- 181
Query: 175 SGLYSSK------------VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTM 222
+ SS+ D+W++G I+ + + FQ +Q+ K+ +++ P
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAII-DPNH 238
Query: 223 DSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQH 282
+ +FP + +D ++++ DP +R + E L H
Sbjct: 239 E-------------IEFPDI-----------PEKDLQDVLKCCLKRDPKQRISIPELLAH 274
Query: 283 PFFK 286
P+ +
Sbjct: 275 PYVQ 278
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 16 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ C +LY + + K ++ + Q +G+DY+H +
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYLHAKS 129
Query: 123 YFHRDLKPENLLVSQG-TIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA + + G+ + APE++
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
YS + D++A G ++ EL+ + + + DQ+
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 223
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 104/211 (49%), Gaps = 20/211 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 12 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 71
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L + L S K
Sbjct: 72 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 131
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER----VGT 163
++ G+ Y++ + HRDL N V++ T+KI DFG+ R+I Y + +
Sbjct: 132 GEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPV 191
Query: 164 RWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 192 RW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 220
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEV-VAIKALKKSYS-REKCLNLREVKCLRK 55
EK +L ++LG GSFG V++ + K E VA+K + +S S RE+ L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQK------------QQLFSES 102
++V++ ++ + V E M +L + + + + Q++ +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 103 AVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER- 160
A ++ G+ Y++ + + HRDL N +V+ T+KI DFG+ R+I Y +
Sbjct: 137 A------EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGG 190
Query: 161 ---VGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
+ RW APE L K G++++ DMW+ G ++ E+
Sbjct: 191 KGLLPVRW-MAPESL-KDGVFTTSSDMWSFGVVLWEI 225
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 9 KLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKV 64
+LG G+FG C + + ++G +VA+K L+ S ++ RE++ L+ L+ IVK
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 65 KELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ + G ++ V E + L + ++ + S + + Q+ +G++Y+ +
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGC--LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 123 YFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPY--TERVGTR---WYQAPEILFKSG 176
HRDL N+LV S+ +KIADFGLA+ + Y G WY APE L
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESL-SDN 205
Query: 177 LYSSKVDMWAMGAIMAELLLF 197
++S + D+W+ G ++ EL +
Sbjct: 206 IFSRQSDVWSFGVVLYELFTY 226
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEV-VAIKALKKSYS-REKCLNLREVKCLRK 55
EK +L ++LG GSFG V++ + K E VA+K + +S S RE+ L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQK------------QQLFSES 102
++V++ ++ + V E M +L + + + + Q++ +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 103 AVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER- 160
A ++ G+ Y++ + + HRDL N +V+ T+KI DFG+ R+I Y +
Sbjct: 137 A------EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG 190
Query: 161 ---VGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
+ RW APE L K G++++ DMW+ G ++ E+
Sbjct: 191 KGLLPVRW-MAPESL-KDGVFTTSSDMWSFGVVLWEI 225
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEV--VAIKALKKSYS---REKCLNLREVKCLRK 55
E L + LG G FG V++ V H GE VA+K KK + +EK ++ E ++
Sbjct: 24 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS--EAVIMKN 81
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
L+HP+IVK+ +I E+ + L +E K ++ + + + Q+ + +
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAM 138
Query: 116 DYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREI---DAFPPYTERVGTRWYQAPEI 171
Y+ HRD+ N+LV S +K+ DFGL+R I D + R+ +W I
Sbjct: 139 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 198
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLF--RPLF 201
F+ +++ D+W M E+L F +P F
Sbjct: 199 NFRR--FTTASDVWMFAVCMWEILSFGKQPFF 228
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%), Gaps = 16/201 (7%)
Query: 9 KLGSGSFG----CVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKV 64
+LG G+FG C + + ++G +VA+K L+ S ++ RE++ L+ L+ IVK
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 65 KELIVEKG--NVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ + G ++ V E + L + ++ + S + + Q+ +G++Y+ +
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGC--LRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 123 YFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPY--TERVGTR---WYQAPEILFKSG 176
HRDL N+LV S+ +KIADFGLA+ + Y G WY APE L
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWY-APESL-SDN 193
Query: 177 LYSSKVDMWAMGAIMAELLLF 197
++S + D+W+ G ++ EL +
Sbjct: 194 IFSRQSDVWSFGVVLYELFTY 214
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEV--VAIKALKKSYS---REKCLNLREVKCLRK 55
E L + LG G FG V++ V H GE VA+K KK + +EK ++ E ++
Sbjct: 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS--EAVIMKN 69
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
L+HP+IVK+ +I E+ + L +E K ++ + + + Q+ + +
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAM 126
Query: 116 DYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREI---DAFPPYTERVGTRWYQAPEI 171
Y+ HRD+ N+LV S +K+ DFGL+R I D + R+ +W I
Sbjct: 127 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 186
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLF--RPLF 201
F+ +++ D+W M E+L F +P F
Sbjct: 187 NFRR--FTTASDVWMFAVCMWEILSFGKQPFF 216
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 131/302 (43%), Gaps = 53/302 (17%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPN- 60
YS+ K++GSG V+Q +N+ ++ AIK + + + L+ E+ L KL +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 61 -IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
I+++ + + ++ V EC +L ++ KK K++ + + +H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIH 144
Query: 120 QQGYFHRDLKPENLLVSQGTIKIADFGLAREIDAFPPYT---ERVGTRWYQAPEILFKSG 176
Q G H DLKP N L+ G +K+ DFG+A ++ +VGT Y PE +
Sbjct: 145 QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAI--KD 202
Query: 177 LYSSK------------VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDS 224
+ SS+ D+W++G I+ + + FQ +Q+ K+ +++ P +
Sbjct: 203 MSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAII-DPNHE- 258
Query: 225 WADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQHPF 284
+FP + +D ++++ DP +R + E L HP+
Sbjct: 259 ------------IEFPDI-----------PEKDLQDVLKCCLKRDPKQRISIPELLAHPY 295
Query: 285 FK 286
+
Sbjct: 296 VQ 297
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 24/213 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 10 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 69
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L + L S K
Sbjct: 70 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 129
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG----- 162
++ G+ Y++ + HRDL N +V++ T+KI DFG+ R+I R G
Sbjct: 130 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD--XXRKGGKGLL 187
Query: 163 -TRWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 188 PVRW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 218
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 38 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 94
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ C +LY + + K ++ + Q +G+DY+H +
Sbjct: 95 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYLHAKS 151
Query: 123 YFHRDLKPENLLVSQG-TIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA + + G+ + APE++
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
YS + D++A G ++ EL+ + + + DQ+
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 245
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 14/214 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 39 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 95
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
+ C +LY + + K ++ + Q +G+DY+H +
Sbjct: 96 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYLHAKS 152
Query: 123 YFHRDLKPENLLVSQG-TIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA + + G+ + APE++
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
YS + D++A G ++ EL+ + + + DQ+
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 246
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Query: 2 EKYSLTKKLGSGSFGCVWQAV-NKHSGEV--VAIKALKKSYS---REKCLNLREVKCLRK 55
E L + LG G FG V++ V H GE VA+K KK + +EK ++ E ++
Sbjct: 8 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMS--EAVIMKN 65
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGL 115
L+HP+IVK+ +I E+ + L +E K ++ + + + Q+ + +
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLT---LVLYSLQICKAM 122
Query: 116 DYMHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREI---DAFPPYTERVGTRWYQAPEI 171
Y+ HRD+ N+LV S +K+ DFGL+R I D + R+ +W I
Sbjct: 123 AYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESI 182
Query: 172 LFKSGLYSSKVDMWAMGAIMAELLLF--RPLF 201
F+ +++ D+W M E+L F +P F
Sbjct: 183 NFRR--FTTASDVWMFAVCMWEILSFGKQPFF 212
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE---KCLNLREVKCLRKLNHPNIVKVKE 66
LG G FG V + +G++ A K L+K ++ + + L E + L K+N +V +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 67 LIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + V M + ++Y + +A F E+ + ++ GL+ +H++
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAG------FPEARAVFYAAEICCGLEDLHRE 305
Query: 122 GYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSS 180
+RDLKPEN+L+ G I+I+D GLA + RVGT Y APE++ K+ Y+
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV-KNERYTF 364
Query: 181 KVDMWAMGAIMAELLLFRPLFQ 202
D WA+G ++ E++ + FQ
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 24/213 (11%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNK-----HSGEVVAIKALKKSYS-REKCLNLREVKCLRK 55
EK +++++LG GSFG V++ V K VAIK + ++ S RE+ L E +++
Sbjct: 19 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKE 78
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLF- 109
N ++V++ ++ + + E M + L L + L S K
Sbjct: 79 FNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMA 138
Query: 110 -QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG----- 162
++ G+ Y++ + HRDL N +V++ T+KI DFG+ R+I R G
Sbjct: 139 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETD--XXRKGGKGLL 196
Query: 163 -TRWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
RW +PE L K G++++ D+W+ G ++ E+
Sbjct: 197 PVRW-MSPESL-KDGVFTTYSDVWSFGVVLWEI 227
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 100/214 (46%), Gaps = 14/214 (6%)
Query: 5 SLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNL--REVKCLRKLNHPNIV 62
++ +++GSGSFG V++ K G+V A+K L + + L EV LRK H NI+
Sbjct: 11 TVGQRIGSGSFGTVYKG--KWHGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
C +LY + + K ++ + Q +G+DY+H +
Sbjct: 68 LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIAR---QTAQGMDYLHAKS 124
Query: 123 YFHRDLKPENLLVSQG-TIKIADFGLA---REIDAFPPYTERVGTRWYQAPEILF--KSG 176
HRDLK N+ + + T+KI DFGLA + + G+ + APE++
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 177 LYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
YS + D++A G ++ EL+ + + + DQ+
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI 218
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEV-VAIKALKKSYS-REKCLNLREVKCLRK 55
EK +L ++LG GSFG V++ + K E VA+K + +S S RE+ L E ++
Sbjct: 16 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 75
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQK------------QQLFSES 102
++V++ ++ + V E M +L + + + + Q++ +
Sbjct: 76 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 135
Query: 103 AVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER- 160
A ++ G+ Y++ + + HRDL N +V+ T+KI DFG+ R+I Y +
Sbjct: 136 A------EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG 189
Query: 161 ---VGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
+ RW APE L K G++++ DMW+ G ++ E+
Sbjct: 190 KGLLPVRW-MAPESL-KDGVFTTSSDMWSFGVVLWEI 224
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + YS + L+ L E + K NH
Sbjct: 48 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNH 107
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 165
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 226 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 16/202 (7%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSRE---KCLNLREVKCLRKLNHPNIVKVKE 66
LG G FG V + +G++ A K L+K ++ + + L E + L K+N +V +
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAY 251
Query: 67 LIVEKGNVFFVFECM-----QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
K + V M + ++Y + +A F E+ + ++ GL+ +H++
Sbjct: 252 AYETKDALCLVLTLMNGGDLKFHIYHMGQAG------FPEARAVFYAAEICCGLEDLHRE 305
Query: 122 GYFHRDLKPENLLVS-QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSS 180
+RDLKPEN+L+ G I+I+D GLA + RVGT Y APE++ K+ Y+
Sbjct: 306 RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVV-KNERYTF 364
Query: 181 KVDMWAMGAIMAELLLFRPLFQ 202
D WA+G ++ E++ + FQ
Sbjct: 365 SPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 10 LGSGSFGCVWQAVNKHSGEVV--AIKALKKSYSREKCLNLR-EVKCLRKL-NHPNIVKVK 65
+G G+FG V +A K G + AIK +K+ S++ + E++ L KL +HPNI+ +
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 66 ELIVEKGNVFFVFECM-QCNLYQLMEAKK------------QKQQLFSESAVKAWLFQVF 112
+G ++ E NL + + S + + V
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYT-ERVGTRWYQAPE 170
RG+DY+ Q+ + HRDL N+LV + + KIADFGL+R + + T R+ RW
Sbjct: 143 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES 202
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELL 195
+ + +Y++ D+W+ G ++ E++
Sbjct: 203 LNY--SVYTTNSDVWSYGVLLWEIV 225
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 10 LGSGSFGCVWQAVNKHSGEVV--AIKALKKSYSREKCLNLR-EVKCLRKL-NHPNIVKVK 65
+G G+FG V +A K G + AIK +K+ S++ + E++ L KL +HPNI+ +
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 66 ELIVEKGNVFFVFECM-QCNLYQLMEAKK------------QKQQLFSESAVKAWLFQVF 112
+G ++ E NL + + S + + V
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYT-ERVGTRWYQAPE 170
RG+DY+ Q+ + HRDL N+LV + + KIADFGL+R + + T R+ RW
Sbjct: 153 RGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES 212
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELL 195
+ + +Y++ D+W+ G ++ E++
Sbjct: 213 LNY--SVYTTNSDVWSYGVLLWEIV 235
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 105/224 (46%), Gaps = 31/224 (13%)
Query: 6 LTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPN 60
L ++LG G+FG V+ A +VA+KALK + RE + L L H +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 61 IVKVKELIVEKGNVFFVFECMQ-CNLYQLMEAK---------KQKQQLFSESAVKAWLF- 109
IVK + + + VFE M+ +L + + A Q +Q E + L
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 110 --QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERVG---- 162
Q+ G+ Y+ Q + HRDL N LV +KI DFG++R++ + Y RVG
Sbjct: 139 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY--RVGGHTM 196
Query: 163 --TRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLF--RPLFQ 202
RW I+++ ++++ D+W+ G I+ E+ + +P FQ
Sbjct: 197 LPIRWMPPESIMYRK--FTTESDVWSFGVILWEIFTYGKQPWFQ 238
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 121/283 (42%), Gaps = 71/283 (25%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS--YSREKCLNLREVKCLRKLN--H 58
+Y + +KLG G F VW + VA+K +K + Y+ ++ +KC+R+ +
Sbjct: 32 RYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESDPSD 91
Query: 59 PNIVKVKELI-------VEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQV 111
PN V +LI + +V VFE + +L + + K Q VK+ + QV
Sbjct: 92 PNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWI--IKSNYQGLPVRCVKSIIRQV 149
Query: 112 FRGLDYMHQQ-GYFHRDLKPENLLV-----------SQGT-------------------- 139
+GLDY+H + H D+KPEN+L+ ++ T
Sbjct: 150 LQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTAPA 209
Query: 140 -----------------IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSSKV 182
+KIAD G A + +TE + TR Y++ E+L +G YS+
Sbjct: 210 ADLLVNPLDPRNADKIRVKIADLGNACWVHKH--FTEDIQTRQYRSIEVLIGAG-YSTPA 266
Query: 183 DMWAMGAIMAELLLFRPLFQ---GTD---EADQMYKICSVLGS 219
D+W+ + EL LF+ G D + D + I +LGS
Sbjct: 267 DIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGS 309
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 138/343 (40%), Gaps = 50/343 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E Y + K +G G+FG V +K + +V A+K L K + E + N
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 59 PNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
P +V++ + ++ V E M +L LM E + + +V LD
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDA 183
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREID--AFPPYTERVGTRWYQAPEILFK 174
+H G+ HRD+KP+N+L+ + G +K+ADFG +++ VGT Y +PE+L
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243
Query: 175 ---SGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTMDSWADGLRQ 231
G Y + D W++G + E+L+ F KI + S T
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT---------- 293
Query: 232 AMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCK--RPTAAEALQHPFFKRCL 289
FP + + S++A NLI + + + R E +H FFK
Sbjct: 294 -------FPDDNDI---------SKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ 337
Query: 290 YVPPHLRST--PAVAATRRGMLKQ-----QGDRIDAEALPYPK 325
+ LR T P V + + D+ + E P PK
Sbjct: 338 WAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFPIPK 380
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E Y + K +G G+FG V +K + +V A+K L K + E + N
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 59 PNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
P +V++ + ++ V E M +L LM E + + +V LD
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDA 188
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREID--AFPPYTERVGTRWYQAPEILFK 174
+H G+ HRD+KP+N+L+ + G +K+ADFG +++ VGT Y +PE+L
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 175 ---SGLYSSKVDMWAMGAIMAELLL 196
G Y + D W++G + E+L+
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLV 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 96/205 (46%), Gaps = 15/205 (7%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSY---SREKCLNLREVKCLRKLNH 58
E Y + K +G G+FG V +K + +V A+K L K + E + N
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 59 PNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
P +V++ + ++ V E M +L LM E + + +V LD
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD-----VPEKWARFYTAEVVLALDA 188
Query: 118 MHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREID--AFPPYTERVGTRWYQAPEILFK 174
+H G+ HRD+KP+N+L+ + G +K+ADFG +++ VGT Y +PE+L
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 175 ---SGLYSSKVDMWAMGAIMAELLL 196
G Y + D W++G + E+L+
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLV 273
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 20/208 (9%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK-----L 56
E + + K +G G+FG V K++ +V A+K L K + L E C R+ +
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKW----EMLKRAETACFREERDVLV 129
Query: 57 NHPN--IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRG 114
N + I + + N++ V + L+ + + E + +L ++
Sbjct: 130 NGDSKWITTLHYAFQDDNNLYLVMDYYVGG--DLLTLLSKFEDRLPEEMARFYLAEMVIA 187
Query: 115 LDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREI--DAFPPYTERVGTRWYQAPEI 171
+D +HQ Y HRD+KP+N+L+ G I++ADFG ++ D + VGT Y +PEI
Sbjct: 188 IDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEI 247
Query: 172 L----FKSGLYSSKVDMWAMGAIMAELL 195
L G Y + D W++G M E+L
Sbjct: 248 LQAMEGGKGRYGPECDWWSLGVCMYEML 275
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 132/304 (43%), Gaps = 57/304 (18%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLN--LREVKCLRKLNHPN- 60
YS+ K++GSG V+Q +N+ ++ AIK + + + L+ E+ L KL +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 61 -IVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMH 119
I+++ + + ++ V EC +L ++ KK K++ + + +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS----IDPWERKSYWKNMLEAVHTIH 172
Query: 120 QQGYFHRDLKPENLLVSQGTIKIADFGLAREIDAFPPYT-----ERVGTRWYQAPEILFK 174
Q G H DLKP N L+ G +K+ DFG+A ++ P T +VG Y PE +
Sbjct: 173 QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ--PDTTSVVKDSQVGAVNYMPPEAI-- 228
Query: 175 SGLYSSK------------VDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPTM 222
+ SS+ D+W++G I+ + + FQ +Q+ K+ +++ P
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI--INQISKLHAII-DPNH 285
Query: 223 DSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQH 282
+ +FP + +D ++++ DP +R + E L H
Sbjct: 286 E-------------IEFPDI-----------PEKDLQDVLKCCLKRDPKQRISIPELLAH 321
Query: 283 PFFK 286
P+ +
Sbjct: 322 PYVQ 325
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 145/376 (38%), Gaps = 111/376 (29%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS--YSREKCLNLREVKCLRKL--NH 58
+Y + +KLG G F VW + + + VA+K +K + Y+ +R +K +R N
Sbjct: 38 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 97
Query: 59 PNIVKVKELI-------VEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQV 111
PN V +L+ V ++ VFE + +L + + K Q VK + QV
Sbjct: 98 PNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWI--IKSNYQGLPLPCVKKIIQQV 155
Query: 112 FRGLDYMHQQ-GYFHRDLKPENLLVSQGT------------------------------- 139
+GLDY+H + H D+KPEN+L+S
Sbjct: 156 LQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPA 215
Query: 140 -------------------IKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSS 180
+KIAD G A + +TE + TR Y++ E+L SG Y++
Sbjct: 216 TAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSG-YNT 272
Query: 181 KVDMWAMGAIMAELLLFRPLFQG------TDEADQMYKICSVLGS--------------- 219
D+W+ + EL LF+ T + D + I +LG
Sbjct: 273 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEF 332
Query: 220 ----------PTMDSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWD 269
+ W GL + + Y++ Q + + + ++E +
Sbjct: 333 FTKKGDLKHITKLKPW--GLFEVLVEKYEWSQEEAAGFTDFL-------LPMLELI---- 379
Query: 270 PCKRPTAAEALQHPFF 285
P KR TAAE L+HP+
Sbjct: 380 PEKRATAAECLRHPWL 395
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 145/376 (38%), Gaps = 111/376 (29%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKS--YSREKCLNLREVKCLRKL--NH 58
+Y + +KLG G F VW + + + VA+K +K + Y+ +R +K +R N
Sbjct: 22 RYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPND 81
Query: 59 PNIVKVKELI-------VEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQV 111
PN V +L+ V ++ VFE + +L + + K Q VK + QV
Sbjct: 82 PNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWI--IKSNYQGLPLPCVKKIIQQV 139
Query: 112 FRGLDYMHQQ-GYFHRDLKPENLLVSQG-------------------------------- 138
+GLDY+H + H D+KPEN+L+S
Sbjct: 140 LQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPA 199
Query: 139 ------------------TIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLYSS 180
+KIAD G A + +TE + TR Y++ E+L SG Y++
Sbjct: 200 TAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSG-YNT 256
Query: 181 KVDMWAMGAIMAELLLFRPLFQG------TDEADQMYKICSVLGS--------------- 219
D+W+ + EL LF+ T + D + I +LG
Sbjct: 257 PADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEF 316
Query: 220 ----------PTMDSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWD 269
+ W GL + + Y++ Q + + + ++E +
Sbjct: 317 FTKKGDLKHITKLKPW--GLFEVLVEKYEWSQEEAAGFTDFL-------LPMLELI---- 363
Query: 270 PCKRPTAAEALQHPFF 285
P KR TAAE L+HP+
Sbjct: 364 PEKRATAAECLRHPWL 379
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEV-VAIKALKKSYS-REKCLNLREVKCLRK 55
EK +L ++LG GSFG V++ + K E VA+K + +S S RE+ L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQK------------QQLFSES 102
++V++ ++ + V E M +L + + + + Q++ +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 103 AVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV 161
A ++ G+ Y++ + + HRDL N +V+ T+KI DFG+ R+I R
Sbjct: 137 A------EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD--XXRK 188
Query: 162 G------TRWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
G RW APE L K G++++ DMW+ G ++ E+
Sbjct: 189 GGKGLLPVRW-MAPESL-KDGVFTTSSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEV-VAIKALKKSYS-REKCLNLREVKCLRK 55
EK +L ++LG GSFG V++ + K E VA+K + +S S RE+ L E ++
Sbjct: 14 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 73
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQK------------QQLFSES 102
++V++ ++ + V E M +L + + + + Q++ +
Sbjct: 74 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 133
Query: 103 AVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV 161
A ++ G+ Y++ + + HRDL N +V+ T+KI DFG+ R+I R
Sbjct: 134 A------EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD--XXRK 185
Query: 162 G------TRWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
G RW APE L K G++++ DMW+ G ++ E+
Sbjct: 186 GGKGLLPVRW-MAPESL-KDGVFTTSSDMWSFGVVLWEI 222
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 106 AWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGT-IKIADFGLAREIDAFPPYTERVGTR 164
++ FQV RG++++ + HRDL N+L+S+ +KI DFGLAR+I P Y + TR
Sbjct: 203 SYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTR 262
Query: 165 W---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ APE +F +YS+K D+W+ G ++ E+
Sbjct: 263 LPLKWMAPESIFDK-IYSTKSDVWSYGVLLWEIF 295
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 36/219 (16%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEV-VAIKALKKSYS-REKCLNLREVKCLRK 55
EK +L ++LG GSFG V++ + K E VA+K + +S S RE+ L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQK------------QQLFSES 102
++V++ ++ + V E M +L + + + + Q++ +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 103 AVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTERV 161
A ++ G+ Y++ + + HRDL N +V+ T+KI DFG+ R+I R
Sbjct: 137 A------EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETD--XXRK 188
Query: 162 G------TRWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
G RW APE L K G++++ DMW+ G ++ E+
Sbjct: 189 GGKGLLPVRW-MAPESL-KDGVFTTSSDMWSFGVVLWEI 225
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 6 LTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSY-SREKCLN--LREVKCLRKLNH 58
L +KLG GSFG V W A + + V A+K LK S+ + ++ +REV + L+H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
N++++ +++ + V E L L++ ++ Q F + + QV G+ Y+
Sbjct: 81 RNLIRLYGVVLTP-PMKMVTEL--APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREI----DAFPPYTERVGTRWYQAPEILF 173
+ + HRDL NLL+ ++ +KI DFGL R + D + R + APE L
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL- 196
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF 197
K+ +S D W G + E+ +
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTY 220
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEV-VAIKALKKSYS-REKCLNLREVKCLRK 55
EK +L ++LG GSFG V++ + K E VA+K + +S S RE+ L E ++
Sbjct: 17 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 76
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQK------------QQLFSES 102
++V++ ++ + V E M +L + + + + Q++ +
Sbjct: 77 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 136
Query: 103 AVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER- 160
A ++ G+ Y++ + + HR+L N +V+ T+KI DFG+ R+I Y +
Sbjct: 137 A------EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG 190
Query: 161 ---VGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
+ RW APE L K G++++ DMW+ G ++ E+
Sbjct: 191 KGLLPVRW-MAPESL-KDGVFTTSSDMWSFGVVLWEI 225
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 6 LTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSY-SREKCLN--LREVKCLRKLNH 58
L +KLG GSFG V W A + + V A+K LK S+ + ++ +REV + L+H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
N++++ +++ + V E L L++ ++ Q F + + QV G+ Y+
Sbjct: 71 RNLIRLYGVVLTP-PMKMVTEL--APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREI----DAFPPYTERVGTRWYQAPEILF 173
+ + HRDL NLL+ ++ +KI DFGL R + D + R + APE L
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL- 186
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF 197
K+ +S D W G + E+ +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTY 210
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 6 LTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSY-SREKCLN--LREVKCLRKLNH 58
L +KLG GSFG V W A + + V A+K LK S+ + ++ +REV + L+H
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
N++++ +++ + V E L L++ ++ Q F + + QV G+ Y+
Sbjct: 75 RNLIRLYGVVLTP-PMKMVTEL--APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREI----DAFPPYTERVGTRWYQAPEILF 173
+ + HRDL NLL+ ++ +KI DFGL R + D + R + APE L
Sbjct: 132 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL- 190
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF 197
K+ +S D W G + E+ +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTY 214
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 32/217 (14%)
Query: 2 EKYSLTKKLGSGSFGCVWQA----VNKHSGEV-VAIKALKKSYS-REKCLNLREVKCLRK 55
EK +L ++LG GSFG V++ + K E VA+K + +S S RE+ L E ++
Sbjct: 18 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKG 77
Query: 56 LNHPNIVKVKELIVEKGNVFFVFECM-QCNLYQLMEAKKQK------------QQLFSES 102
++V++ ++ + V E M +L + + + + Q++ +
Sbjct: 78 FTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMA 137
Query: 103 AVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTER- 160
A ++ G+ Y++ + + HR+L N +V+ T+KI DFG+ R+I Y +
Sbjct: 138 A------EIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 161 ---VGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAEL 194
+ RW APE L K G++++ DMW+ G ++ E+
Sbjct: 192 KGLLPVRW-MAPESL-KDGVFTTSSDMWSFGVVLWEI 226
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 143/332 (43%), Gaps = 57/332 (17%)
Query: 4 YSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALK--KSYSREKCLNLREVKCLRKLNHPNI 61
+ + +K+G G+FG V + + + A+K ++ K Y+R + E L+K+ + +I
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKI---EADILKKIQNDDI 93
Query: 62 -----VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLD 116
VK + ++ +FE + +LY+++ + F +K + ++ + L+
Sbjct: 94 NNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIIT--RNNYNGFHIEDIKLYCIEILKALN 151
Query: 117 YMHQQGYFHRDLKPENLL---------------VSQGT-----------IKIADFGLARE 150
Y+ + H DLKPEN+L V+ G IK+ DFG A
Sbjct: 152 YLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATF 211
Query: 151 IDAFPPYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQM 210
+ + + TR Y+APE++ G + DMW+ G ++AEL LF+ + + +
Sbjct: 212 KSDY--HGSIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHL 268
Query: 211 YKICSVLG--SPTMDSWADGLRQAMAINYQFPQL------SGVN----LSALMP----SA 254
+ S++ M A + +N +L S +N + +P
Sbjct: 269 AMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIK 328
Query: 255 SEDAINLIESLCSWDPCKRPTAAEALQHPFFK 286
E + + S+ DP RP+ AE L+H F +
Sbjct: 329 HELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 6 LTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSY-SREKCLN--LREVKCLRKLNH 58
L +KLG GSFG V W A + + V A+K LK S+ + ++ +REV + L+H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
N++++ +++ + V E L L++ ++ Q F + + QV G+ Y+
Sbjct: 71 RNLIRLYGVVLTP-PMKMVTEL--APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREI----DAFPPYTERVGTRWYQAPEILF 173
+ + HRDL NLL+ ++ +KI DFGL R + D + R + APE L
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL- 186
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF 197
K+ +S D W G + E+ +
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTY 210
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 6 LTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSY-SREKCLN--LREVKCLRKLNH 58
L +KLG GSFG V W A + + V A+K LK S+ + ++ +REV + L+H
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
N++++ +++ + V E L L++ ++ Q F + + QV G+ Y+
Sbjct: 75 RNLIRLYGVVLTP-PMKMVTEL--APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 131
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREI----DAFPPYTERVGTRWYQAPEILF 173
+ + HRDL NLL+ ++ +KI DFGL R + D + R + APE L
Sbjct: 132 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL- 190
Query: 174 KSGLYSSKVDMWAMGAIMAELLLF 197
K+ +S D W G + E+ +
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTY 214
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 129/301 (42%), Gaps = 63/301 (20%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN-HPNIVKV 64
+K+GSG FG V++ V + G + AIK KK + S ++ LREV L H ++V+
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQL---FSESAVKAWLFQVFRGLDYMHQQ 121
E ++ E CN L +A + ++ F E+ +K L QV RGL Y+H
Sbjct: 73 FSAWAEDDHMLIQNEY--CNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 130
Query: 122 GYFHRDLKPENLLVSQGTI--------------------KIADFGLAREIDAFPPYTERV 161
H D+KP N+ +S+ +I KI D G I + P E
Sbjct: 131 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--PQVEEG 188
Query: 162 GTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSPT 221
+R + A E+L ++ + K D++A+ + PL + D+
Sbjct: 189 DSR-FLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQ--------------- 232
Query: 222 MDSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAEALQ 281
W + +RQ + P++ V S++ L++ + DP +RP+A ++
Sbjct: 233 ---WHE-IRQG-----RLPRIPQV--------LSQEFTELLKVMIHPDPERRPSAMALVK 275
Query: 282 H 282
H
Sbjct: 276 H 276
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 10 LGSGSFGCVWQAVNKHSGEVV--AIKALKKSYSREKCLNLR-EVKCLRKL-NHPNIVKVK 65
+G G+FG V +A K G + AIK +K+ S++ + E++ L KL +HPNI+ +
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 66 ELIVEKGNVFFVFECM-QCNLYQLMEAKK------------QKQQLFSESAVKAWLFQVF 112
+G ++ E NL + + S + + V
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 113 RGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPYT-ERVGTRWYQAPE 170
RG+DY+ Q+ + HR+L N+LV + + KIADFGL+R + + T R+ RW
Sbjct: 150 RGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIES 209
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELL 195
+ + +Y++ D+W+ G ++ E++
Sbjct: 210 LNYS--VYTTNSDVWSYGVLLWEIV 232
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + KLNH
Sbjct: 34 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNH 93
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 151
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 212 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + KLNH
Sbjct: 48 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNH 107
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 165
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 226 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 129/304 (42%), Gaps = 69/304 (22%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN-HPNIVKV 64
+K+GSG FG V++ V + G + AIK KK + S ++ LREV L H ++V+
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQL---FSESAVKAWLFQVFRGLDYMHQQ 121
E ++ E CN L +A + ++ F E+ +K L QV RGL Y+H
Sbjct: 75 FSAWAEDDHMLIQNE--YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 132
Query: 122 GYFHRDLKPENLLVSQGTI--------------------KIADFGLAREIDAFPPYTERV 161
H D+KP N+ +S+ +I KI D G I + P E
Sbjct: 133 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--PQVEEG 190
Query: 162 GTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSP- 220
+R + A E+L ++ + K D++A+ + +C+ P
Sbjct: 191 DSR-FLANEVLQENYTHLPKADIFALALTV---------------------VCAAGAEPL 228
Query: 221 --TMDSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAE 278
D W + +RQ + P++ V S++ L++ + DP +RP+A
Sbjct: 229 PRNGDQWHE-IRQG-----RLPRIPQV--------LSQEFTELLKVMIHPDPERRPSAMA 274
Query: 279 ALQH 282
++H
Sbjct: 275 LVKH 278
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 129/304 (42%), Gaps = 69/304 (22%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN-HPNIVKV 64
+K+GSG FG V++ V + G + AIK KK + S ++ LREV L H ++V+
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQL---FSESAVKAWLFQVFRGLDYMHQQ 121
E ++ E CN L +A + ++ F E+ +K L QV RGL Y+H
Sbjct: 77 FSAWAEDDHMLIQNE--YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 134
Query: 122 GYFHRDLKPENLLVSQGTI--------------------KIADFGLAREIDAFPPYTERV 161
H D+KP N+ +S+ +I KI D G I + P E
Sbjct: 135 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--PQVEEG 192
Query: 162 GTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSP- 220
+R + A E+L ++ + K D++A+ + +C+ P
Sbjct: 193 DSR-FLANEVLQENYTHLPKADIFALALTV---------------------VCAAGAEPL 230
Query: 221 --TMDSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAE 278
D W + +RQ + P++ V S++ L++ + DP +RP+A
Sbjct: 231 PRNGDQWHE-IRQG-----RLPRIPQV--------LSQEFTELLKVMIHPDPERRPSAMA 276
Query: 279 ALQH 282
++H
Sbjct: 277 LVKH 280
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 77 NPHVCRLLGICL-TSTVQLIMQLMPFG--XLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 194 HR--IYTHQSDVWSYGVTVWELMTF 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 80 NPHVCRLLGICL-TSTVQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 197 HR--IYTHQSDVWSYGVTVWELMTF 219
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 129/304 (42%), Gaps = 69/304 (22%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALKK--SYSREKCLNLREVKCLRKLN-HPNIVKV 64
+K+GSG FG V++ V + G + AIK KK + S ++ LREV L H ++V+
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 65 KELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQL---FSESAVKAWLFQVFRGLDYMHQQ 121
E ++ E CN L +A + ++ F E+ +K L QV RGL Y+H
Sbjct: 75 FSAWAEDDHMLIQNE--YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM 132
Query: 122 GYFHRDLKPENLLVSQGTI--------------------KIADFGLAREIDAFPPYTERV 161
H D+KP N+ +S+ +I KI D G I + P E
Sbjct: 133 SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS--PQVEEG 190
Query: 162 GTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKICSVLGSP- 220
+R+ A E+L ++ + K D++A+ + +C+ P
Sbjct: 191 DSRFL-ANEVLQENYTHLPKADIFALALTV---------------------VCAAGAEPL 228
Query: 221 --TMDSWADGLRQAMAINYQFPQLSGVNLSALMPSASEDAINLIESLCSWDPCKRPTAAE 278
D W + +RQ + P++ V S++ L++ + DP +RP+A
Sbjct: 229 PRNGDQWHE-IRQG-----RLPRIPQV--------LSQEFTELLKVMIHPDPERRPSAMA 274
Query: 279 ALQH 282
++H
Sbjct: 275 LVKH 278
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCL---NLREVKCLRKLNHPNIVKV 64
+ LG G FG V+ K +G++ A K L K +++ + E K L K++ IV +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 65 KELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
K ++ V M Y + + F E + Q+ GL+++HQ+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 123 YFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTE-RVGTRWYQAPEILFKSGLYSS 180
+RDLKPEN+L+ G ++I+D GLA E+ A T+ GT + APE+L Y
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-YDF 368
Query: 181 KVDMWAMGAIMAELLLFRPLFQGTDE 206
VD +A+G + E++ R F+ E
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCL---NLREVKCLRKLNHPNIVKV 64
+ LG G FG V+ K +G++ A K L K +++ + E K L K++ IV +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 65 KELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
K ++ V M Y + + F E + Q+ GL+++HQ+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 123 YFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTE-RVGTRWYQAPEILFKSGLYSS 180
+RDLKPEN+L+ G ++I+D GLA E+ A T+ GT + APE+L Y
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-YDF 368
Query: 181 KVDMWAMGAIMAELLLFRPLFQGTDE 206
VD +A+G + E++ R F+ E
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 78 NPHVCRLLGICL-TSTVQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 195 HR--IYTHQSDVWSYGVTVWELMTF 217
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 9/204 (4%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCL---NLREVKCLRKLNHPNIVKVKE 66
LG G FG V+ K +G++ A K L K +++ + E K L K++ IV +
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAY 252
Query: 67 LIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGYF 124
K ++ V M Y + + F E + Q+ GL+++HQ+
Sbjct: 253 AFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 125 HRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTE-RVGTRWYQAPEILFKSGLYSSKV 182
+RDLKPEN+L+ G ++I+D GLA E+ A T+ GT + APE+L Y V
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-YDFSV 370
Query: 183 DMWAMGAIMAELLLFRPLFQGTDE 206
D +A+G + E++ R F+ E
Sbjct: 371 DYFALGVTLYEMIAARGPFRARGE 394
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 76 NPHVCRLLGICL-TSTVQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 193 HR--IYTHQSDVWSYGVTVWELMTF 215
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 79 NPHVCRLLGICL-TSTVQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 196 HR--IYTHQSDVWSYGVTVWELMTF 218
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 7 TKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLNHPNI 61
K LGSG+FG V++ + GE V AIK L ++ + + + E + ++HP++
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
V++ + + + V + M L+E + + + W Q+ +G+ Y+ ++
Sbjct: 103 VRLLGVCLSP-TIQLVTQLMPHGC--LLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER 159
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEILFKSG 176
HRDL N+LV S +KI DFGLAR ++ + ++ +W I ++
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK- 218
Query: 177 LYSSKVDMWAMGAIMAELLLF 197
++ + D+W+ G + EL+ F
Sbjct: 219 -FTHQSDVWSYGVTIWELMTF 238
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 77 NPHVCRLLGICL-TSTVQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 194 HR--IYTHQSDVWSYGVTVWELMTF 216
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCL---NLREVKCLRKLNHPNIVKV 64
+ LG G FG V+ K +G++ A K L K +++ + E K L K++ IV +
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSL 250
Query: 65 KELIVEKGNVFFVFECMQCN--LYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
K ++ V M Y + + F E + Q+ GL+++HQ+
Sbjct: 251 AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG-FQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 123 YFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTE-RVGTRWYQAPEILFKSGLYSS 180
+RDLKPEN+L+ G ++I+D GLA E+ A T+ GT + APE+L Y
Sbjct: 310 IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEE-YDF 368
Query: 181 KVDMWAMGAIMAELLLFRPLFQGTDE 206
VD +A+G + E++ R F+ E
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 110/214 (51%), Gaps = 23/214 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQA-VNKHSGEVV--AIKALKKSYSREKCLN--LREVKCLRKL 56
++++L + LG G FG V +A + + G V A+K LK + LRE C+++
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 57 NHPNIVKVKELIVE---KGNV---FFVFECMQ-CNLYQLMEAKKQKQQLFS---ESAVKA 106
+HP++ K+ + + KG + + M+ +L+ + A + + F+ ++ V+
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR- 141
Query: 107 WLFQVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYTE----RV 161
++ + G++Y+ + + HRDL N ++++ T+ +ADFGL+R+I + Y + ++
Sbjct: 142 FMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 162 GTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+W + LY+ D+WA G M E++
Sbjct: 202 PVKWLALESL--ADNLYTVHSDVWAFGVTMWEIM 233
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 6 LTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSY-SREKCLN--LREVKCLRKLNH 58
L +KLG GSFG V W A + + V A+K LK S+ + ++ +REV + L+H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
N++++ +++ + V E L L++ ++ Q F + + QV G+ Y+
Sbjct: 81 RNLIRLYGVVLTP-PMKMVTEL--APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 137
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQ-------APE 170
+ + HRDL NLL+ ++ +KI DFGL R A P + + ++ APE
Sbjct: 138 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHXVMQEHRKVPFAWCAPE 194
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLLF 197
L K+ +S D W G + E+ +
Sbjct: 195 SL-KTRTFSHASDTWMFGVTLWEMFTY 220
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 113/240 (47%), Gaps = 24/240 (10%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKH-SGEVVAIKALKKSYSREKCLNLREVK-CLRKLNHPN 60
+Y + + G G ++ A++++ +G V +K L S E + L ++ HP+
Sbjct: 81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPS 140
Query: 61 IVKVKELI--VEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
IV++ + ++ + M+ Q + K+ K Q + A+L ++ L Y+
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL--KRSKGQKLPVAEAIAYLLEILPALSYL 198
Query: 119 HQQGYFHRDLKPENLLVSQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPEILFKSGLY 178
H G + DLKPEN+++++ +K+ D G I++F GT +QAPEI+ ++G
Sbjct: 199 HSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSF---GYLYGTPGFQAPEIV-RTG-P 253
Query: 179 SSKVDMWAMGAIMAELLLFRPL-----FQGTDEADQMYKICSVLGSPTMDSWADGLRQAM 233
+ D++ +G +A L L P G E D + K T DS+ LR+A+
Sbjct: 254 TVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLK--------TYDSYGRLLRRAI 305
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 27/213 (12%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEV-----VAIKALKKS-YSREKCLNLREVKCLRKLN-HPN 60
K LG+G+FG V +A G+ VA+K LK + ++ EK + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 61 IVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKK------------QKQQLFSESAVKAW 107
IV + G V + E C +L + K+ ++ S + +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 108 LFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY----TERVG 162
QV +G+ ++ + HRD+ N+L++ G + KI DFGLAR+I Y R+
Sbjct: 172 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 231
Query: 163 TRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+W APE +F +Y+ + D+W+ G ++ E+
Sbjct: 232 VKW-MAPESIFDC-VYTVQSDVWSYGILLWEIF 262
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 76 NPHVCRLLGICL-TSTVQLITQLMPFG--XLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 193 HR--IYTHQSDVWSYGVTVWELMTF 215
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 23/207 (11%)
Query: 6 LTKKLGSGSFGCV----WQAVNKHSGEVVAIKALKKSY-SREKCLN--LREVKCLRKLNH 58
L +KLG GSFG V W A + + V A+K LK S+ + ++ +REV + L+H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYM 118
N++++ +++ + V E L L++ ++ Q F + + QV G+ Y+
Sbjct: 71 RNLIRLYGVVLTP-PMKMVTEL--APLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYL 127
Query: 119 HQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPPYTERVGTRWYQ-------APE 170
+ + HRDL NLL+ ++ +KI DFGL R A P + + ++ APE
Sbjct: 128 ESKRFIHRDLAARNLLLATRDLVKIGDFGLMR---ALPQNDDHXVMQEHRKVPFAWCAPE 184
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLLF 197
L K+ +S D W G + E+ +
Sbjct: 185 SL-KTRTFSHASDTWMFGVTLWEMFTY 210
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 97/204 (47%), Gaps = 20/204 (9%)
Query: 8 KKLGSGSFGCVWQA-VNKHSGEVVAIKALKKSYSRE-KCLNLREVKCLRKLNHPNIVKVK 65
K+G G FG V++ VN + V + A+ + E K +E+K + K H N+V++
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQ------VFRGLDYMH 119
+ ++ V+ +Y + + + +W + G++++H
Sbjct: 97 GFSSDGDDLCLVY------VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 120 QQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPP---YTERVGTRWYQAPEILFKS 175
+ + HRD+K N+L+ + T KI+DFGLAR + F + VGT Y APE L
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL--R 208
Query: 176 GLYSSKVDMWAMGAIMAELLLFRP 199
G + K D+++ G ++ E++ P
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 98/201 (48%), Gaps = 15/201 (7%)
Query: 7 TKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLNHPNI 61
K LGSG+FG V++ + GE V AIK L ++ + + + E + ++HP++
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
V++ + + + V + M L+E + + + W Q+ +G+ Y+ ++
Sbjct: 80 VRLLGVCLSP-TIQLVTQLMPHGC--LLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER 136
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEILFKSG 176
HRDL N+LV S +KI DFGLAR ++ + ++ +W I ++
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK- 195
Query: 177 LYSSKVDMWAMGAIMAELLLF 197
++ + D+W+ G + EL+ F
Sbjct: 196 -FTHQSDVWSYGVTIWELMTF 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 82 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 199 HR--IYTHQSDVWSYGVTVWELMTF 221
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEV-----VAIKALKKS-YSREKCLNLREVKCLRKLN-HPN 60
K LG+G+FG V +A G+ VA+K LK + ++ EK + E+K + L H N
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 61 IVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAK------KQKQQLFSESAVKAWLFQVFR 113
IV + G V + E C +L + K K+ + + + QV +
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 163
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY----TERVGTRWYQA 168
G+ ++ + HRD+ N+L++ G + KI DFGLAR+I Y R+ +W A
Sbjct: 164 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW-MA 222
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELL 195
PE +F +Y+ + D+W+ G ++ E+
Sbjct: 223 PESIFDC-VYTVQSDVWSYGILLWEIF 248
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYS-REKCLNLREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 83 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 200 HR--IYTHQSDVWSYGVTVWELMTF 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 79 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 196 HR--IYTHQSDVWSYGVTVWELMTF 218
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 79 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 196 HR--IYTHQSDVWSYGVTVWELMTF 218
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 25/211 (11%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEV-----VAIKALKKS-YSREKCLNLREVKCLRKLN-HPN 60
K LG+G+FG V +A G+ VA+K LK + ++ EK + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 61 IVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQ----------KQQLFSESAVKAWLF 109
IV + G V + E C +L + K + S + +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 110 QVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY----TERVGTR 164
QV +G+ ++ + HRD+ N+L++ G + KI DFGLAR+I Y R+ +
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 231
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W APE +F +Y+ + D+W+ G ++ E+
Sbjct: 232 W-MAPESIFDC-VYTVQSDVWSYGILLWEIF 260
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 79 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 196 HR--IYTHQSDVWSYGVTVWELMTF 218
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 21/207 (10%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEV-----VAIKALKKS-YSREKCLNLREVKCLRKLN-HPN 60
K LG+G+FG V +A G+ VA+K LK + ++ EK + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 61 IVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAK------KQKQQLFSESAVKAWLFQVFR 113
IV + G V + E C +L + K K+ + + + QV +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQ 171
Query: 114 GLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY----TERVGTRWYQA 168
G+ ++ + HRD+ N+L++ G + KI DFGLAR+I Y R+ +W A
Sbjct: 172 GMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW-MA 230
Query: 169 PEILFKSGLYSSKVDMWAMGAIMAELL 195
PE +F +Y+ + D+W+ G ++ E+
Sbjct: 231 PESIFDC-VYTVQSDVWSYGILLWEIF 256
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 101 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 218 HR--IYTHQSDVWSYGVTVWELMTF 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + K NH
Sbjct: 34 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 93
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 151
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 211
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 212 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 76 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 193 HR--IYTHQSDVWSYGVTVWELMTF 215
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 78 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 195 HR--IYTHQSDVWSYGVTVWELMTF 217
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + K NH
Sbjct: 60 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 119
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 120 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 177
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 178 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 237
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 238 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 266
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 86 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 203 HR--IYTHQSDVWSYGVTVWELMTF 225
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + K NH
Sbjct: 25 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 84
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 85 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 142
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 143 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 202
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 203 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 231
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + K NH
Sbjct: 50 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 109
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 110 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 167
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 168 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 227
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 228 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 256
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + K NH
Sbjct: 40 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 99
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 100 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 157
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 158 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 217
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 218 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 246
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + K NH
Sbjct: 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 92
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 93 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 150
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 211 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYS-REKCLNLREVKCLRKLNHPNIV 62
K LGSG+FG V++ + GE V AIK L+++ S + L E + +++P++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
++ + + V + + M L++ ++ + + W Q+ +G++Y+ +
Sbjct: 75 RLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 131
Query: 123 YFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEILFKSGL 177
HRDL N+LV + +KI DFGLA+ + A + +V +W IL + +
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR--I 189
Query: 178 YSSKVDMWAMGAIMAELLLF 197
Y+ + D+W+ G + EL+ F
Sbjct: 190 YTHQSDVWSYGVTVWELMTF 209
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYS-REKCLNLREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 76 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 193 HR--IYTHQSDVWSYGVTVWELMTF 215
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + K NH
Sbjct: 74 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 133
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 134 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 191
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 192 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 252 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 8 KKLGSGSFGCVWQA-VNKHSGEVVAIKALKKSYSRE-KCLNLREVKCLRKLNHPNIVKVK 65
K+G G FG V++ VN + V + A+ + E K +E+K + K H N+V++
Sbjct: 31 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 90
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQ------VFRGLDYMH 119
+ ++ V+ +Y + + + +W + G++++H
Sbjct: 91 GFSSDGDDLCLVY------VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 144
Query: 120 QQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT---ERVGTRWYQAPEILFKS 175
+ + HRD+K N+L+ + T KI+DFGLAR + F VGT Y APE L
Sbjct: 145 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL--R 202
Query: 176 GLYSSKVDMWAMGAIMAELLLFRP 199
G + K D+++ G ++ E++ P
Sbjct: 203 GEITPKSDIYSFGVVLLEIITGLP 226
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + K NH
Sbjct: 33 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 92
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 93 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 150
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 210
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 211 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 8 KKLGSGSFGCVWQA-VNKHSGEVVAIKALKKSYSRE-KCLNLREVKCLRKLNHPNIVKVK 65
K+G G FG V++ VN + V + A+ + E K +E+K + K H N+V++
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELL 96
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQ------VFRGLDYMH 119
+ ++ V+ +Y + + + +W + G++++H
Sbjct: 97 GFSSDGDDLCLVY------VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH 150
Query: 120 QQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPYT---ERVGTRWYQAPEILFKS 175
+ + HRD+K N+L+ + T KI+DFGLAR + F VGT Y APE L
Sbjct: 151 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL--R 208
Query: 176 GLYSSKVDMWAMGAIMAELLLFRP 199
G + K D+++ G ++ E++ P
Sbjct: 209 GEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + K NH
Sbjct: 48 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 107
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 108 QNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 165
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVK 225
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 226 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 254
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + K NH
Sbjct: 51 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 110
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 111 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 168
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+AR+I Y + + +
Sbjct: 169 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 229 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 257
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 6 LTKKLGSGSFGCVWQAVNKHSGEV---VAIKALKKSYSREKCLN--LREVKCLRKLNHPN 60
L K LG G FG V + K VA+K +K S ++ + L E C++ +HPN
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPN 97
Query: 61 IVKVKELIVEKGN--------VFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
++++ + +E + + + + Y L + + + ++ +
Sbjct: 98 VIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157
Query: 113 RGLDYMHQQGYFHRDLKPEN-LLVSQGTIKIADFGLAREIDAFPPYTE----RVGTRWYQ 167
G++Y+ + + HRDL N +L T+ +ADFGL+++I + Y + ++ +W
Sbjct: 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 168 APEILFKSGLYSSKVDMWAMGAIMAEL 194
+ + +Y+SK D+WA G M E+
Sbjct: 218 IESLADR--VYTSKSDVWAFGVTMWEI 242
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYS-REKCLNLREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ G++Y
Sbjct: 73 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 190 HR--IYTHQSDVWSYGVTVWELMTF 212
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 25/211 (11%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEV-----VAIKALKKS-YSREKCLNLREVKCLRKLN-HPN 60
K LG+G+FG V +A G+ VA+K LK + ++ EK + E+K + L H N
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 61 IVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAKKQKQQL-------FSESAVKAWLF--- 109
IV + G V + E C +L + K + + S ++ + L
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 110 QVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY----TERVGTR 164
QV +G+ ++ + HRD+ N+L++ G + KI DFGLAR+I Y R+ +
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 231
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W APE +F +Y+ + D+W+ G ++ E+
Sbjct: 232 W-MAPESIFDC-VYTVQSDVWSYGILLWEIF 260
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK----LN 57
E + + K +G G+FG V K++ + A+K L K + L E C R+ L
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW----EMLKRAETACFREERDVLV 129
Query: 58 HPN---IVKVKELIVEKGNVFFVFEC-MQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ + I + ++ +++ V + + +L L+ + K E + ++ ++
Sbjct: 130 NGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK---LPEDMARFYIGEMVL 186
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFG--LAREIDAFPPYTERVGTRWYQAPE 170
+D +HQ Y HRD+KP+N+L+ G I++ADFG L D + VGT Y +PE
Sbjct: 187 AIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPE 246
Query: 171 IL--FKSGL--YSSKVDMWAMGAIMAELL 195
IL + G+ Y + D W++G M E+L
Sbjct: 247 ILQAMEDGMGKYGPECDWWSLGVCMYEML 275
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 96/201 (47%), Gaps = 15/201 (7%)
Query: 7 TKKLGSGSFGCVWQAVNKHSGE----VVAIKALKKSYSREKCLN-LREVKCLRKLNHPNI 61
K LGSG+FG V++ + GE VAIK L+++ S + L E + + P +
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQ 121
++ + + V V + M L++ ++ + + W Q+ +G+ Y+
Sbjct: 82 SRLLGICL-TSTVQLVTQLMPYGC--LLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDV 138
Query: 122 GYFHRDLKPENLLV-SQGTIKIADFGLAR--EIDAFPPYTE--RVGTRWYQAPEILFKSG 176
HRDL N+LV S +KI DFGLAR +ID + + +V +W IL +
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRR- 197
Query: 177 LYSSKVDMWAMGAIMAELLLF 197
++ + D+W+ G + EL+ F
Sbjct: 198 -FTHQSDVWSYGVTVWELMTF 217
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 22/209 (10%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRK----LN 57
E + + K +G G+FG V K++ + A+K L K + L E C R+ L
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKW----EMLKRAETACFREERDVLV 145
Query: 58 HPN---IVKVKELIVEKGNVFFVFEC-MQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFR 113
+ + I + ++ +++ V + + +L L+ + K E + ++ ++
Sbjct: 146 NGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK---LPEDMARFYIGEMVL 202
Query: 114 GLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFG--LAREIDAFPPYTERVGTRWYQAPE 170
+D +HQ Y HRD+KP+N+L+ G I++ADFG L D + VGT Y +PE
Sbjct: 203 AIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPE 262
Query: 171 IL--FKSGL--YSSKVDMWAMGAIMAELL 195
IL + G+ Y + D W++G M E+L
Sbjct: 263 ILQAMEDGMGKYGPECDWWSLGVCMYEML 291
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEV----VAIKALKKSYSREKCLNLRE-VKCLRKLNHPNIV 62
K LGSG FG V + V GE V IK ++ R+ + + + + L+H +IV
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
++ L ++ V + + L L++ +Q + + W Q+ +G+ Y+ + G
Sbjct: 97 RLLGL-CPGSSLQLVTQYLP--LGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 153
Query: 123 YFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPP------YTE-RVGTRWYQAPEILFK 174
HR+L N+L+ S +++ADFG+A D PP Y+E + +W I F
Sbjct: 154 MVHRNLAARNVLLKSPSQVQVADFGVA---DLLPPDDKQLLYSEAKTPIKWMALESIHF- 209
Query: 175 SGLYSSKVDMWAMGAIMAELLLF 197
G Y+ + D+W+ G + EL+ F
Sbjct: 210 -GKYTHQSDVWSYGVTVWELMTF 231
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEV----VAIKALKKSYSREKCLNLRE-VKCLRKLNHPNIV 62
K LGSG FG V + V GE V IK ++ R+ + + + + L+H +IV
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 63 KVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQG 122
++ L ++ V + + L L++ +Q + + W Q+ +G+ Y+ + G
Sbjct: 79 RLLGL-CPGSSLQLVTQYLP--LGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG 135
Query: 123 YFHRDLKPENLLV-SQGTIKIADFGLAREIDAFPP------YTE-RVGTRWYQAPEILFK 174
HR+L N+L+ S +++ADFG+A D PP Y+E + +W I F
Sbjct: 136 MVHRNLAARNVLLKSPSQVQVADFGVA---DLLPPDDKQLLYSEAKTPIKWMALESIHF- 191
Query: 175 SGLYSSKVDMWAMGAIMAELLLF 197
G Y+ + D+W+ G + EL+ F
Sbjct: 192 -GKYTHQSDVWSYGVTVWELMTF 213
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 78 NPHVCRLLGICL-TSTVQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFG A+ + A + +V +W IL
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 195 HR--IYTHQSDVWSYGVTVWELMTF 217
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 78 NPHVCRLLGICL-TSTVQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFG A+ + A + +V +W IL
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 195 HR--IYTHQSDVWSYGVTVWELMTF 217
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYS-REKCLNLREVKCLRKLN 57
++ K L SG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 83 NPHVCRLLGICL-TSTVQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 200 HR--IYTHQSDVWSYGVTVWELMTF 222
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 80 NPHVCRLLGICL-TSTVQLIMQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFG A+ + A + +V +W IL
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 197 HR--IYTHQSDVWSYGVTVWELMTF 219
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 5 SLTKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLN-LREVKCLRKLNH 58
+L + LG G+FG V++ N S VA+K L + S + L+ L E + K NH
Sbjct: 34 TLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNH 93
Query: 59 PNIVKVKELIVEKGNVFFVFECMQCNLYQ--LMEAKKQKQQLFSESAVKAWLFQVFR--- 113
NIV+ + ++ F + E M + L E + + Q S + + L V R
Sbjct: 94 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLD--LLHVARDIA 151
Query: 114 -GLDYMHQQGYFHRDLKPENLLVS---QGTI-KIADFGLAREIDAFPPYTE----RVGTR 164
G Y+ + + HRD+ N L++ G + KI DFG+A++I Y + + +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVK 211
Query: 165 WYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
W P F G+++SK D W+ G ++ E+
Sbjct: 212 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 28/231 (12%)
Query: 2 EKYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNI 61
+ + + K +G G+F V K +G+V A+K + K L EV C R+ +
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW----DMLKRGEVSCFREERDVLV 116
Query: 62 VKVKELIVEKGNVFFVFECMQCNLYQLME----------AKKQKQQLFSESAVKAWLFQV 111
+ I + + F F+ + LY +ME K +++ +E A + +L ++
Sbjct: 117 NGDRRWITQ---LHFAFQD-ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA-RFYLAEI 171
Query: 112 FRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFG--LAREIDAFPPYTERVGTRWYQA 168
+D +H+ GY HRD+KP+N+L+ + G I++ADFG L D VGT Y +
Sbjct: 172 VMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLS 231
Query: 169 PEIL------FKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKI 213
PEIL +G Y + D WA+G E+ + F A+ KI
Sbjct: 232 PEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 83 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFG A+ + A + +V +W IL
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 200 HR--IYTHQSDVWSYGVTVWELMTF 222
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 34/223 (15%)
Query: 7 TKKLGSGSFGCVWQA-----VNKHSGEVVAIKALKKSYSREKCLNL-REVKCLRKLNHPN 60
+ +G G+FG V+QA + +VA+K LK+ S + + RE + + ++PN
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPN 111
Query: 61 IVKVKELIVEKGNVFFVFECMQCN----LYQLMEAKKQKQQLFSESAVKAWLF------- 109
IVK+ + + +FE M + M S+ + +A +
Sbjct: 112 IVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171
Query: 110 ----------QVFRGLDYMHQQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFPPY- 157
QV G+ Y+ ++ + HRDL N LV + +KIADFGL+R I + Y
Sbjct: 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 158 ---TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLF 197
+ + RW PE +F + Y+++ D+WA G ++ E+ +
Sbjct: 232 ADGNDAIPIRW-MPPESIFYNR-YTTESDVWAYGVVLWEIFSY 272
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK------SYSREKCLNLREVKCLRKL 56
+Y L LG G FG V+ VAIK + + S + EV L K+
Sbjct: 32 EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 57 N----HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
HP ++++ + + V E L + +K L E + + QV
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLE-RPLPAQDLFDYITEKGPL-GEGPSRCFFGQVV 149
Query: 113 RGLDYMHQQGYFHRDLKPENLLVS--QGTIKIADFGLAREIDAFPPYTERVGTRWYQAPE 170
+ + H +G HRD+K EN+L+ +G K+ DFG + PYT+ GTR Y PE
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHD-EPYTDFDGTRVYSPPE 208
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELL 195
+ + ++ +W++G ++ +++
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMV 233
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 78 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFG A+ + A + +V +W IL
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 195 HR--IYTHQSDVWSYGVTVWELMTF 217
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AI L+++ S + L E + ++
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 110 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 166
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 167 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 227 HR--IYTHQSDVWSYGVTVWELMTF 249
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYS-REKCLNLREVKCLRKLN 57
++ K L SG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 83 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 200 HR--IYTHQSDVWSYGVTVWELMTF 222
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K LGSG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 76 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFG A+ + A + +V +W IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 193 HR--IYTHQSDVWSYGVTVWELMTF 215
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVV----AIKALKKSYSREKCLN-LREVKCLRKLN 57
++ K L SG+FG V++ + GE V AIK L+++ S + L E + ++
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 58 HPNIVKVKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDY 117
+P++ ++ + + V + + M L++ ++ + + W Q+ +G++Y
Sbjct: 76 NPHVCRLLGICL-TSTVQLITQLMPFGC--LLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 118 MHQQGYFHRDLKPENLLV-SQGTIKIADFGLAREIDA----FPPYTERVGTRWYQAPEIL 172
+ + HRDL N+LV + +KI DFGLA+ + A + +V +W IL
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 173 FKSGLYSSKVDMWAMGAIMAELLLF 197
+ +Y+ + D+W+ G + EL+ F
Sbjct: 193 HR--IYTHQSDVWSYGVTVWELMTF 215
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 32/173 (18%)
Query: 108 LFQVFRGLDYMHQQGYFHRDLKPENLLVS-QGTIKIADFGLAREID-------------A 153
Q+ ++++H +G HRDLKP N+ + +K+ DFGL +D A
Sbjct: 170 FIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229
Query: 154 FPPYTERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDEADQMYKI 213
+ + +VGT+ Y +PE + + YS KVD++++G L+LF L+ + + +++ I
Sbjct: 230 YATHXGQVGTKLYMSPEQIHGNN-YSHKVDIFSLG-----LILFELLYSFSTQMERVRII 283
Query: 214 CSVLGSPTMDSWADGLRQAMAINYQFPQLSGVNLSALMPSASE--DAINLIES 264
V L+ + ++PQ + L PS +E +A ++IE+
Sbjct: 284 TDV----------RNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALK---KSYSREKCLNLREVKCLRKLNHPNIVK 63
+G G FG V++A NK AIK ++ + +REK + REVK L KL HP IV+
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVM--REVKALAKLEHPGIVR 68
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 8 KKLGSGSFGCVWQA-VNKHSGEVVAIKALKKSYSRE-KCLNLREVKCLRKLNHPNIVKVK 65
K G G FG V++ VN + V + A+ + E K +E+K K H N+V++
Sbjct: 28 NKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELL 87
Query: 66 ELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQ------VFRGLDYMH 119
+ ++ V+ +Y + + + +W + G++++H
Sbjct: 88 GFSSDGDDLCLVY------VYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLH 141
Query: 120 QQGYFHRDLKPENLLVSQG-TIKIADFGLAREIDAFP---PYTERVGTRWYQAPEILFKS 175
+ + HRD+K N+L+ + T KI+DFGLAR + F + VGT Y APE L
Sbjct: 142 ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEAL--R 199
Query: 176 GLYSSKVDMWAMGAIMAELLLFRP 199
G + K D+++ G ++ E++ P
Sbjct: 200 GEITPKSDIYSFGVVLLEIITGLP 223
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 101/216 (46%), Gaps = 17/216 (7%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK---SYSREKCLNLR---EVKCLRKL 56
+Y + LGSG FG V+ + VAIK ++K S E R EV L+K+
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 57 NH--PNIVKVKELIVEKGNVFFVFECMQC--NLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
+ ++++ + + + E M+ +L+ + + Q E +++ +QV
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQ----EELARSFFWQVL 124
Query: 113 RGLDYMHQQGYFHRDLKPENLLV--SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPE 170
+ + H G HRD+K EN+L+ ++G +K+ DFG + YT+ GTR Y PE
Sbjct: 125 EAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPE 183
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELLLFRPLFQGTDE 206
+ + +W++G ++ +++ F+ +E
Sbjct: 184 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE 219
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 101/220 (45%), Gaps = 34/220 (15%)
Query: 8 KKLGSGSFGCVWQAVNKHSGEV-----VAIKALKKS-YSREKCLNLREVKCLRKLN-HPN 60
K LG+G+FG V +A G+ VA+K LK + ++ EK + E+K + L H N
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 61 IVKVKELIVEKGNVFFVFE-CMQCNLYQLMEAK-------------------KQKQQLFS 100
IV + G V + E C +L + K K+ +
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 101 ESAVKAWLFQVFRGLDYMHQQGYFHRDLKPENLLVSQGTI-KIADFGLAREIDAFPPY-- 157
+ + QV +G+ ++ + HRD+ N+L++ G + KI DFGLAR+I Y
Sbjct: 157 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 216
Query: 158 --TERVGTRWYQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
R+ +W APE +F +Y+ + D+W+ G ++ E+
Sbjct: 217 KGNARLPVKW-MAPESIFDC-VYTVQSDVWSYGILLWEIF 254
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 23/202 (11%)
Query: 10 LGSGSFGCVWQAVNKHSGEVVAIKALKKSYSREKCLNLREVKCLRKLNHPNIVKVKELIV 69
+G G FG V++ V + G VA+K S+ E++ L HP++V +
Sbjct: 47 IGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 70 EKGNVFFVFECMQCNLYQLMEAKKQKQQLFSE---SAVKAW------LFQVFRGLDYMHQ 120
E+ + + Y+ ME K+ L+ + +W RGL Y+H
Sbjct: 106 ERNEMILI--------YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT 157
Query: 121 QGYFHRDLKPENLLVSQGTI-KIADFGLAR---EIDAFPPYTERVGTRWYQAPEILFKSG 176
+ HRD+K N+L+ + + KI DFG+++ E+D GT Y PE K G
Sbjct: 158 RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIK-G 216
Query: 177 LYSSKVDMWAMGAIMAELLLFR 198
+ K D+++ G ++ E+L R
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 109 FQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRW-- 165
FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P Y + R
Sbjct: 198 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 166 -YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ APE +F +Y+ + D+W+ G ++ E+
Sbjct: 258 KWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 287
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 109 FQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRW-- 165
FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P Y + R
Sbjct: 200 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 166 -YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ APE +F +Y+ + D+W+ G ++ E+
Sbjct: 260 KWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 289
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 107 WLFQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRW 165
+ FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P Y + R
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 264
Query: 166 ---YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ APE +F +Y+ + D+W+ G ++ E+
Sbjct: 265 PLKWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 296
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 109 FQVFRGLDYMHQQGYFHRDLKPENLLVSQ-GTIKIADFGLAREIDAFPPYTERVGTRW-- 165
FQV +G++++ + HRDL N+L+S+ +KI DFGLAR+I P Y + R
Sbjct: 205 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 166 -YQAPEILFKSGLYSSKVDMWAMGAIMAELL 195
+ APE +F +Y+ + D+W+ G ++ E+
Sbjct: 265 KWMAPETIFDR-VYTIQSDVWSFGVLLWEIF 294
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 20/202 (9%)
Query: 8 KKLGSGSFGCVWQAVNK-HSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNHPNIVK 63
K+LGSG+FG V + + + K+ + + L L E +++L++P IV+
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 434
Query: 64 VKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGY 123
+ I E + V E + L L + +Q + + ++ ++ + QV G+ Y+ + +
Sbjct: 435 MIG-ICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNF 490
Query: 124 FHRDLKPEN-LLVSQGTIKIADFGLAREIDAFPPYTE-----RVGTRWYQAPEIL--FKS 175
HRDL N LLV+Q KI+DFGL++ + A Y + + +WY APE + +K
Sbjct: 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK- 548
Query: 176 GLYSSKVDMWAMGAIMAELLLF 197
+SSK D+W+ G +M E +
Sbjct: 549 --FSSKSDVWSFGVLMWEAFSY 568
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 103/202 (50%), Gaps = 20/202 (9%)
Query: 8 KKLGSGSFGCVWQAVNK-HSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNHPNIVK 63
K+LGSG+FG V + + + K+ + + L L E +++L++P IV+
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 435
Query: 64 VKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGY 123
+ I E + V E + L L + +Q + + ++ ++ + QV G+ Y+ + +
Sbjct: 436 MIG-ICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNF 491
Query: 124 FHRDLKPEN-LLVSQGTIKIADFGLAREIDAFPPYTE-----RVGTRWYQAPEIL--FKS 175
HRDL N LLV+Q KI+DFGL++ + A Y + + +WY APE + +K
Sbjct: 492 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECINYYK- 549
Query: 176 GLYSSKVDMWAMGAIMAELLLF 197
+SSK D+W+ G +M E +
Sbjct: 550 --FSSKSDVWSFGVLMWEAFSY 569
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 16/200 (8%)
Query: 8 KKLGSGSFGCVWQAVNK-HSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNHPNIVK 63
K+LGSG+FG V + + + K+ + + L L E +++L++P IV+
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 64 VKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGY 123
+ I E + V E + L L + +Q + + ++ ++ + QV G+ Y+ + +
Sbjct: 93 MIG-ICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNF 148
Query: 124 FHRDLKPEN-LLVSQGTIKIADFGLAREIDAFPPYTE-----RVGTRWYQAPEILFKSGL 177
HRDL N LLV+Q KI+DFGL++ + A Y + + +WY APE +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI-NYYK 206
Query: 178 YSSKVDMWAMGAIMAELLLF 197
+SSK D+W+ G +M E +
Sbjct: 207 FSSKSDVWSFGVLMWEAFSY 226
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 16/200 (8%)
Query: 8 KKLGSGSFGCVWQAVNK-HSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNHPNIVK 63
K+LGSG+FG V + + + K+ + + L L E +++L++P IV+
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 92
Query: 64 VKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGY 123
+ I E + V E + L L + +Q + + ++ ++ + QV G+ Y+ + +
Sbjct: 93 MIG-ICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNF 148
Query: 124 FHRDLKPEN-LLVSQGTIKIADFGLAREIDAFPPYTE-----RVGTRWYQAPEILFKSGL 177
HRDL N LLV+Q KI+DFGL++ + A Y + + +WY APE +
Sbjct: 149 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI-NYYK 206
Query: 178 YSSKVDMWAMGAIMAELLLF 197
+SSK D+W+ G +M E +
Sbjct: 207 FSSKSDVWSFGVLMWEAFSY 226
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 16/200 (8%)
Query: 8 KKLGSGSFGCVWQAVNK-HSGEVVAIKALKKSYSREKCLN---LREVKCLRKLNHPNIVK 63
K+LGSG+FG V + + + K+ + + L L E +++L++P IV+
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVR 90
Query: 64 VKELIVEKGNVFFVFECMQCNLYQLMEAKKQKQQLFSESAVKAWLFQVFRGLDYMHQQGY 123
+ I E + V E + L L + +Q + + ++ ++ + QV G+ Y+ + +
Sbjct: 91 MIG-ICEAESWMLVMEMAE--LGPLNKYLQQNRHVKDKNIIEL-VHQVSMGMKYLEESNF 146
Query: 124 FHRDLKPEN-LLVSQGTIKIADFGLAREIDAFPPYTE-----RVGTRWYQAPEILFKSGL 177
HRDL N LLV+Q KI+DFGL++ + A Y + + +WY APE +
Sbjct: 147 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY-APECI-NYYK 204
Query: 178 YSSKVDMWAMGAIMAELLLF 197
+SSK D+W+ G +M E +
Sbjct: 205 FSSKSDVWSFGVLMWEAFSY 224
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 3 KYSLTKKLGSGSFGCVWQAVNKHSGEVVAIKALKK---SYSREKCLNLR---EVKCLRKL 56
+Y + LGSG FG V+ + VAIK ++K S E R EV L+K+
Sbjct: 5 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 57 NH--PNIVKVKELIVEKGNVFFVFECMQC--NLYQLMEAKKQKQQLFSESAVKAWLFQVF 112
+ ++++ + + + E + +L+ + + Q E +++ +QV
Sbjct: 65 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQ----EELARSFFWQVL 120
Query: 113 RGLDYMHQQGYFHRDLKPENLLV--SQGTIKIADFGLAREIDAFPPYTERVGTRWYQAPE 170
+ + H G HRD+K EN+L+ ++G +K+ DFG + YT+ GTR Y PE
Sbjct: 121 EAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPE 179
Query: 171 ILFKSGLYSSKVDMWAMGAIMAELL 195
+ + +W++G ++ +++
Sbjct: 180 WIRYHRYHGRSAAVWSLGILLYDMV 204
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.134 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,473,171
Number of Sequences: 62578
Number of extensions: 415331
Number of successful extensions: 5334
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 966
Number of HSP's gapped (non-prelim): 1273
length of query: 356
length of database: 14,973,337
effective HSP length: 100
effective length of query: 256
effective length of database: 8,715,537
effective search space: 2231177472
effective search space used: 2231177472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)