Query 036551
Match_columns 453
No_of_seqs 211 out of 969
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 04:30:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036551.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036551hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dh3_A Transcription factor CR 99.5 7E-14 2.4E-18 107.3 6.3 53 353-405 1-53 (55)
2 1t2k_D Cyclic-AMP-dependent tr 99.3 3.6E-12 1.2E-16 98.8 9.4 55 353-407 1-55 (61)
3 2wt7_A Proto-oncogene protein 99.3 6.7E-12 2.3E-16 98.2 10.4 57 353-409 2-58 (63)
4 1jnm_A Proto-oncogene C-JUN; B 99.3 8.6E-12 3E-16 97.1 7.5 55 353-407 1-55 (62)
5 2dgc_A Protein (GCN4); basic d 99.2 9.3E-12 3.2E-16 97.9 6.8 50 356-405 12-61 (63)
6 1ci6_A Transcription factor AT 99.2 6.7E-11 2.3E-15 92.8 7.7 61 352-419 1-61 (63)
7 1gd2_E Transcription factor PA 99.1 2.3E-10 7.8E-15 92.0 8.4 61 355-415 10-70 (70)
8 1hjb_A Ccaat/enhancer binding 98.8 8.1E-09 2.8E-13 86.1 8.7 64 353-423 15-78 (87)
9 1gu4_A CAAT/enhancer binding p 98.8 1.8E-08 6.2E-13 82.5 8.5 59 354-419 16-74 (78)
10 3a5t_A Transcription factor MA 98.7 6.6E-10 2.2E-14 95.9 -3.6 53 347-399 31-83 (107)
11 2wt7_B Transcription factor MA 98.3 3.4E-06 1.2E-10 70.9 10.3 67 349-422 23-89 (90)
12 2oqq_A Transcription factor HY 97.6 0.00016 5.3E-09 53.1 6.0 40 373-419 2-41 (42)
13 1deb_A APC protein, adenomatou 96.4 0.0072 2.5E-07 46.2 6.2 48 376-423 5-52 (54)
14 1skn_P DNA-binding domain of S 95.9 0.0036 1.2E-07 52.7 2.7 32 350-381 59-90 (92)
15 2w6a_A ARF GTPase-activating p 95.7 0.035 1.2E-06 43.7 7.4 41 376-416 22-62 (63)
16 1go4_E MAD1 (mitotic arrest de 95.5 0.046 1.6E-06 46.7 8.1 25 400-424 73-97 (100)
17 3s9g_A Protein hexim1; cyclin 95.1 0.065 2.2E-06 45.9 7.6 50 373-422 36-92 (104)
18 2jee_A YIIU; FTSZ, septum, coi 95.0 0.083 2.8E-06 43.7 7.8 46 375-420 21-66 (81)
19 3a7p_A Autophagy protein 16; c 94.9 0.15 5.2E-06 46.4 10.0 78 352-429 67-144 (152)
20 3hnw_A Uncharacterized protein 94.6 0.099 3.4E-06 46.5 7.9 51 372-422 73-123 (138)
21 3he5_A Synzip1; heterodimeric 94.0 0.24 8.2E-06 36.6 7.4 45 375-419 4-48 (49)
22 3m48_A General control protein 93.7 0.065 2.2E-06 37.6 3.7 27 376-402 2-28 (33)
23 2jee_A YIIU; FTSZ, septum, coi 93.6 0.15 5E-06 42.2 6.3 53 372-424 25-77 (81)
24 2oxj_A Hybrid alpha/beta pepti 93.4 0.092 3.1E-06 37.0 4.1 28 375-402 2-29 (34)
25 2c9l_Y EB1, zebra, BZLF1 trans 93.4 0.37 1.3E-05 37.5 7.8 38 356-393 4-41 (63)
26 3oja_B Anopheles plasmodium-re 93.3 0.46 1.6E-05 48.7 11.0 44 379-422 535-578 (597)
27 3oja_B Anopheles plasmodium-re 92.6 0.7 2.4E-05 47.3 11.1 49 372-420 535-583 (597)
28 1kd8_B GABH BLL, GCN4 acid bas 92.5 0.19 6.6E-06 35.8 4.8 31 375-405 2-32 (36)
29 3hnw_A Uncharacterized protein 92.5 0.53 1.8E-05 41.8 8.8 48 374-421 82-129 (138)
30 2wt7_A Proto-oncogene protein 92.2 1 3.5E-05 34.8 9.0 38 382-419 24-61 (63)
31 1kd8_A GABH AIV, GCN4 acid bas 92.2 0.14 4.9E-06 36.4 3.7 31 375-405 2-32 (36)
32 3vmx_A Voltage-gated hydrogen 92.1 0.45 1.5E-05 35.9 6.6 41 380-420 3-43 (48)
33 3c3f_A Alpha/beta peptide with 91.9 0.19 6.5E-06 35.4 4.1 29 375-403 2-30 (34)
34 3a2a_A Voltage-gated hydrogen 91.7 0.34 1.2E-05 37.6 5.6 41 380-420 10-50 (58)
35 3m9b_A Proteasome-associated A 91.6 0.13 4.6E-06 50.1 4.2 44 373-416 53-96 (251)
36 3efg_A Protein SLYX homolog; x 91.6 0.5 1.7E-05 38.4 6.9 50 374-423 14-63 (78)
37 2wt7_B Transcription factor MA 91.6 1.7 5.7E-05 36.5 10.2 30 392-421 52-81 (90)
38 3cvf_A Homer-3, homer protein 91.2 0.24 8.4E-06 40.7 4.8 48 375-422 7-54 (79)
39 2yy0_A C-MYC-binding protein; 91.2 0.41 1.4E-05 36.4 5.7 32 382-420 20-51 (53)
40 1jnm_A Proto-oncogene C-JUN; B 91.1 0.6 2E-05 35.8 6.6 39 381-419 22-60 (62)
41 3c3g_A Alpha/beta peptide with 91.1 0.35 1.2E-05 33.9 4.7 28 376-403 2-29 (33)
42 3mq7_A Bone marrow stromal ant 91.1 0.95 3.3E-05 39.8 8.6 42 380-421 70-111 (121)
43 1t6f_A Geminin; coiled-coil, c 91.0 0.32 1.1E-05 34.8 4.5 30 387-416 6-35 (37)
44 2dfs_A Myosin-5A; myosin-V, in 91.0 0.96 3.3E-05 51.5 10.9 21 402-422 1023-1043(1080)
45 2bni_A General control protein 90.9 0.26 8.7E-06 34.8 3.9 28 375-402 2-29 (34)
46 1uo4_A General control protein 90.8 0.26 9E-06 34.7 3.9 28 375-402 2-29 (34)
47 3m91_A Proteasome-associated A 90.6 0.72 2.5E-05 35.0 6.4 39 376-414 11-49 (51)
48 3m91_A Proteasome-associated A 90.3 1 3.5E-05 34.2 7.1 43 380-422 8-50 (51)
49 2hy6_A General control protein 90.1 0.33 1.1E-05 34.2 3.9 29 375-403 2-30 (34)
50 1nkp_B MAX protein, MYC proto- 89.9 1.4 4.8E-05 35.2 8.1 34 390-423 49-82 (83)
51 4h22_A Leucine-rich repeat fli 89.5 1.3 4.5E-05 38.0 8.0 48 373-420 36-83 (103)
52 2wq1_A General control protein 89.5 0.58 2E-05 32.8 4.7 27 376-402 2-28 (33)
53 1hjb_A Ccaat/enhancer binding 89.5 2.2 7.5E-05 35.4 9.1 61 349-409 15-78 (87)
54 2yy0_A C-MYC-binding protein; 89.4 0.64 2.2E-05 35.3 5.3 28 376-403 21-48 (53)
55 3cve_A Homer protein homolog 1 89.4 0.73 2.5E-05 37.3 6.0 44 378-421 4-47 (72)
56 3u06_A Protein claret segregat 88.3 1 3.5E-05 46.1 7.8 52 373-424 9-60 (412)
57 4etp_A Kinesin-like protein KA 87.1 1.2 4.2E-05 45.3 7.5 53 372-424 8-60 (403)
58 2kz5_A Transcription factor NF 86.7 0.062 2.1E-06 45.2 -1.9 24 351-374 64-87 (91)
59 1fmh_A General control protein 86.3 0.86 2.9E-05 31.4 3.9 30 375-404 2-31 (33)
60 3htk_A Structural maintenance 85.9 5.4 0.00019 29.7 8.7 50 371-420 9-58 (60)
61 1nkp_B MAX protein, MYC proto- 85.7 0.92 3.1E-05 36.3 4.6 33 374-406 47-79 (83)
62 3a7o_A Autophagy protein 16; c 85.4 3.8 0.00013 33.3 7.9 48 376-423 27-74 (75)
63 1gd2_E Transcription factor PA 85.3 3.3 0.00011 33.1 7.5 34 374-407 36-69 (70)
64 3trt_A Vimentin; cytoskeleton, 85.3 12 0.0004 29.3 11.1 59 354-415 18-76 (77)
65 2w83_C C-JUN-amino-terminal ki 84.6 1.5 5.1E-05 36.0 5.3 44 377-420 33-76 (77)
66 3s9g_A Protein hexim1; cyclin 84.4 4 0.00014 35.0 8.1 31 373-403 64-94 (104)
67 2r2v_A GCN4 leucine zipper; co 84.4 1.2 4.2E-05 31.4 4.1 28 375-402 2-29 (34)
68 3nmd_A CGMP dependent protein 84.2 1.6 5.6E-05 35.3 5.3 29 372-400 38-66 (72)
69 1jcd_A Major outer membrane li 84.2 5.2 0.00018 30.4 7.8 47 374-420 4-50 (52)
70 1gu4_A CAAT/enhancer binding p 84.2 3.5 0.00012 33.6 7.3 56 349-404 15-73 (78)
71 3m9b_A Proteasome-associated A 83.6 0.79 2.7E-05 44.7 3.9 47 380-426 53-99 (251)
72 3u1c_A Tropomyosin alpha-1 cha 83.3 19 0.00064 30.0 11.8 43 358-400 28-70 (101)
73 2zxx_A Geminin; coiled-coil, c 83.2 3.4 0.00012 33.9 6.9 33 388-420 34-66 (79)
74 1uii_A Geminin; human, DNA rep 83.0 5.2 0.00018 33.2 8.0 33 387-419 45-77 (83)
75 1nlw_A MAD protein, MAX dimeri 82.9 2.1 7.3E-05 34.6 5.6 22 398-419 57-78 (80)
76 2j5u_A MREC protein; bacterial 82.9 0.6 2E-05 44.8 2.7 36 387-422 25-63 (255)
77 1nkp_A C-MYC, MYC proto-oncoge 82.9 4.2 0.00014 33.3 7.4 34 390-423 54-87 (88)
78 2oqq_A Transcription factor HY 82.9 1.9 6.4E-05 31.7 4.7 24 374-397 17-40 (42)
79 1wlq_A Geminin; coiled-coil; 2 82.6 3.9 0.00013 33.9 7.1 30 388-417 38-67 (83)
80 1wt6_A Myotonin-protein kinase 82.1 3.4 0.00012 34.2 6.5 43 380-422 30-72 (81)
81 1gmj_A ATPase inhibitor; coile 81.4 12 0.00039 31.2 9.5 8 381-388 58-65 (84)
82 1wt6_A Myotonin-protein kinase 81.2 9.1 0.00031 31.6 8.8 52 359-410 23-74 (81)
83 3u1c_A Tropomyosin alpha-1 cha 81.1 23 0.00078 29.5 11.7 48 370-417 26-73 (101)
84 2dfs_A Myosin-5A; myosin-V, in 80.7 4.9 0.00017 45.9 9.5 28 383-410 986-1013(1080)
85 2dgc_A Protein (GCN4); basic d 80.4 7 0.00024 30.3 7.5 19 377-395 40-58 (63)
86 1t2k_D Cyclic-AMP-dependent tr 80.1 16 0.00055 27.7 9.4 39 381-419 22-60 (61)
87 3i00_A HIP-I, huntingtin-inter 79.9 19 0.00064 31.3 10.9 47 369-415 35-81 (120)
88 3ghg_A Fibrinogen alpha chain; 79.7 2.4 8.1E-05 45.3 6.0 61 371-431 107-171 (562)
89 3o0z_A RHO-associated protein 79.6 19 0.00064 33.3 11.3 51 367-419 29-79 (168)
90 3mq7_A Bone marrow stromal ant 79.6 8.8 0.0003 33.8 8.6 46 377-422 60-105 (121)
91 3oja_A Leucine-rich immune mol 79.3 10 0.00034 38.2 10.3 28 388-415 435-462 (487)
92 1nkp_A C-MYC, MYC proto-oncoge 79.2 3.7 0.00013 33.6 5.9 34 374-407 52-85 (88)
93 1ic2_A Tropomyosin alpha chain 78.7 23 0.00079 28.2 11.3 46 374-419 27-72 (81)
94 3nmd_A CGMP dependent protein 78.7 8.3 0.00028 31.2 7.6 37 371-407 30-66 (72)
95 3mq9_A Bone marrow stromal ant 78.4 18 0.0006 36.2 11.7 36 378-413 433-468 (471)
96 3q8t_A Beclin-1; autophagy, AT 78.3 6.7 0.00023 32.7 7.3 46 373-418 38-83 (96)
97 3na7_A HP0958; flagellar bioge 78.0 17 0.00058 34.3 10.9 29 376-404 92-120 (256)
98 2eqb_B RAB guanine nucleotide 78.0 7.4 0.00025 33.1 7.4 21 400-420 74-94 (97)
99 3iv1_A Tumor susceptibility ge 77.8 19 0.00064 29.5 9.5 53 370-422 21-73 (78)
100 2v66_B Nuclear distribution pr 77.7 14 0.00047 32.0 9.2 49 376-424 37-85 (111)
101 2wuj_A Septum site-determining 77.5 2.2 7.4E-05 32.5 3.7 30 374-403 27-56 (57)
102 3oja_A Leucine-rich immune mol 77.2 20 0.00069 35.9 11.9 43 369-411 430-472 (487)
103 1ci6_A Transcription factor AT 77.2 7.2 0.00025 30.1 6.7 30 374-403 30-59 (63)
104 2ve7_C Kinetochore protein NUF 77.2 3.2 0.00011 39.8 5.7 59 352-410 119-184 (250)
105 2lw1_A ABC transporter ATP-bin 77.2 4.9 0.00017 32.6 6.0 48 373-420 21-74 (89)
106 1dip_A Delta-sleep-inducing pe 77.1 1.4 4.8E-05 36.1 2.7 29 390-418 17-45 (78)
107 3efg_A Protein SLYX homolog; x 77.1 4.2 0.00014 32.9 5.5 48 377-424 10-57 (78)
108 2wvr_A Geminin; DNA replicatio 76.8 5.7 0.00019 37.8 7.1 25 377-401 118-142 (209)
109 3ra3_A P1C; coiled coil domain 76.3 1.6 5.6E-05 29.0 2.3 26 383-408 2-27 (28)
110 4emc_A Monopolin complex subun 76.3 3.8 0.00013 38.5 5.8 15 385-399 38-52 (190)
111 1ic2_A Tropomyosin alpha chain 76.2 11 0.00038 30.1 7.8 44 375-418 21-64 (81)
112 1a93_B MAX protein, coiled coi 76.2 4 0.00014 28.8 4.5 13 407-419 19-31 (34)
113 2fxo_A Myosin heavy chain, car 75.5 27 0.00092 30.1 10.6 44 378-421 80-123 (129)
114 2v4h_A NF-kappa-B essential mo 75.3 23 0.00078 30.8 9.9 47 375-421 63-109 (110)
115 1am9_A Srebp-1A, protein (ster 74.9 8.5 0.00029 30.9 6.8 64 357-420 6-75 (82)
116 1am9_A Srebp-1A, protein (ster 74.9 4.2 0.00014 32.7 5.0 27 373-399 49-75 (82)
117 4b4t_K 26S protease regulatory 74.4 4 0.00014 41.9 5.9 46 378-423 46-91 (428)
118 1nlw_A MAD protein, MAX dimeri 73.8 7.7 0.00026 31.3 6.3 35 373-407 46-80 (80)
119 4dzn_A Coiled-coil peptide CC- 73.8 7.5 0.00026 26.7 5.2 23 378-400 6-28 (33)
120 1lwu_C Fibrinogen gamma chain; 73.7 10 0.00035 38.0 8.4 48 375-422 13-60 (323)
121 3o0z_A RHO-associated protein 73.0 32 0.0011 31.7 10.9 59 357-422 73-131 (168)
122 3bas_A Myosin heavy chain, str 72.9 37 0.0013 27.6 11.3 52 371-422 32-83 (89)
123 1a93_B MAX protein, coiled coi 72.9 5 0.00017 28.4 4.2 27 387-413 6-32 (34)
124 2xdj_A Uncharacterized protein 72.8 35 0.0012 27.9 10.0 47 376-422 22-68 (83)
125 3htk_A Structural maintenance 72.7 15 0.00051 27.3 7.3 43 377-419 8-50 (60)
126 1dip_A Delta-sleep-inducing pe 72.3 2.2 7.5E-05 34.9 2.7 27 375-401 16-42 (78)
127 3s4r_A Vimentin; alpha-helix, 71.9 41 0.0014 27.8 10.5 32 373-404 55-86 (93)
128 3u59_A Tropomyosin beta chain; 71.6 42 0.0014 27.7 11.9 62 359-420 29-97 (101)
129 2v4h_A NF-kappa-B essential mo 71.6 50 0.0017 28.6 13.6 63 361-423 32-104 (110)
130 3a7p_A Autophagy protein 16; c 71.5 21 0.00071 32.6 9.1 35 375-409 97-131 (152)
131 1go4_E MAD1 (mitotic arrest de 70.9 8.7 0.0003 32.7 6.2 25 375-399 13-37 (100)
132 1joc_A EEA1, early endosomal a 70.7 23 0.00078 30.5 9.0 42 377-418 14-55 (125)
133 4dzn_A Coiled-coil peptide CC- 70.5 8.5 0.00029 26.5 4.8 26 391-416 5-30 (33)
134 3he5_B Synzip2; heterodimeric 70.1 17 0.0006 27.1 6.8 28 384-411 20-47 (52)
135 3q8t_A Beclin-1; autophagy, AT 69.6 47 0.0016 27.5 11.7 70 352-421 24-93 (96)
136 1g6u_A Domain swapped dimer; d 69.1 10 0.00034 28.0 5.3 24 397-420 22-45 (48)
137 2xv5_A Lamin-A/C; structural p 68.9 16 0.00055 29.3 7.1 50 370-419 8-57 (74)
138 4h22_A Leucine-rich repeat fli 68.4 9.9 0.00034 32.7 6.0 50 375-424 31-80 (103)
139 2xdj_A Uncharacterized protein 68.3 40 0.0014 27.6 9.4 43 369-411 22-64 (83)
140 3w03_C DNA repair protein XRCC 68.2 11 0.00039 35.1 6.9 37 374-410 145-181 (184)
141 3he5_B Synzip2; heterodimeric 68.1 13 0.00045 27.7 5.8 41 379-419 8-48 (52)
142 2ve7_C Kinetochore protein NUF 68.1 1.7 5.9E-05 41.7 1.5 46 376-421 157-202 (250)
143 3qh9_A Liprin-beta-2; coiled-c 67.9 24 0.00081 29.2 7.9 44 377-420 36-79 (81)
144 3cve_A Homer protein homolog 1 67.9 23 0.00079 28.5 7.7 49 373-421 20-68 (72)
145 1p9i_A Cortexillin I/GCN4 hybr 67.8 6.9 0.00024 26.6 3.9 23 378-400 3-25 (31)
146 4ati_A MITF, microphthalmia-as 67.6 15 0.00052 31.5 7.1 72 353-424 23-113 (118)
147 1gk7_A Vimentin; intermediate 67.4 14 0.00048 26.4 5.7 30 391-420 9-38 (39)
148 2fxo_A Myosin heavy chain, car 67.0 35 0.0012 29.3 9.4 33 381-413 69-101 (129)
149 1hlo_A Protein (transcription 66.6 12 0.00042 29.6 6.0 24 363-386 18-41 (80)
150 1dh3_A Transcription factor CR 66.5 5.3 0.00018 30.2 3.6 26 397-422 24-49 (55)
151 1fmh_B General control protein 66.4 9.5 0.00032 26.2 4.4 30 375-404 2-31 (33)
152 2xv5_A Lamin-A/C; structural p 66.4 39 0.0013 27.1 8.8 49 374-422 5-53 (74)
153 2oxj_A Hybrid alpha/beta pepti 65.8 12 0.0004 26.5 4.9 28 392-419 5-32 (34)
154 3cvf_A Homer-3, homer protein 65.2 27 0.00091 28.6 7.7 48 374-421 27-74 (79)
155 2ve7_A Kinetochore protein HEC 64.9 7.2 0.00025 38.4 5.2 31 380-410 184-214 (315)
156 3swy_A Cyclic nucleotide-gated 64.7 18 0.00062 26.9 6.1 41 378-421 2-42 (46)
157 1fxk_C Protein (prefoldin); ar 63.4 28 0.00097 29.4 8.1 30 377-406 98-127 (133)
158 1gk6_A Vimentin; intermediate 63.3 12 0.0004 28.6 5.0 42 377-418 3-44 (59)
159 3i00_A HIP-I, huntingtin-inter 63.3 33 0.0011 29.8 8.5 47 376-422 35-81 (120)
160 1gmj_A ATPase inhibitor; coile 62.3 59 0.002 27.0 9.3 10 360-369 23-32 (84)
161 1zme_C Proline utilization tra 62.2 6.6 0.00023 29.4 3.4 24 374-397 44-67 (70)
162 2oa5_A Hypothetical protein BQ 62.2 4.1 0.00014 35.4 2.5 25 374-398 8-32 (110)
163 1jcd_A Major outer membrane li 62.1 25 0.00086 26.7 6.6 34 382-415 5-38 (52)
164 3u06_A Protein claret segregat 61.9 9.5 0.00033 39.0 5.6 50 372-421 15-64 (412)
165 4emc_A Monopolin complex subun 61.7 20 0.0007 33.7 7.3 16 382-397 42-57 (190)
166 4etp_A Kinesin-like protein KA 61.6 14 0.00049 37.4 6.9 50 372-421 15-64 (403)
167 3u59_A Tropomyosin beta chain; 61.3 68 0.0023 26.4 11.7 49 370-418 26-74 (101)
168 1x8y_A Lamin A/C; structural p 61.2 55 0.0019 26.5 9.0 47 373-419 27-73 (86)
169 3a2a_A Voltage-gated hydrogen 61.0 22 0.00076 27.6 6.1 35 366-402 12-46 (58)
170 3na7_A HP0958; flagellar bioge 60.8 35 0.0012 32.1 9.0 50 374-423 32-81 (256)
171 1p9i_A Cortexillin I/GCN4 hybr 60.7 5 0.00017 27.3 2.2 22 400-421 4-25 (31)
172 1fzc_C Fibrin; blood coagulati 60.6 4.9 0.00017 40.2 3.1 48 374-421 4-51 (319)
173 4b4t_K 26S protease regulatory 60.4 15 0.00051 37.7 6.7 43 374-416 49-91 (428)
174 1wle_A Seryl-tRNA synthetase; 60.3 43 0.0015 35.2 10.3 42 383-424 118-159 (501)
175 3qne_A Seryl-tRNA synthetase, 60.0 25 0.00086 37.0 8.5 41 384-424 74-114 (485)
176 2oto_A M protein; helical coil 60.0 26 0.0009 30.8 7.4 33 375-407 51-83 (155)
177 2w83_C C-JUN-amino-terminal ki 59.8 11 0.00039 30.8 4.6 19 402-420 37-55 (77)
178 1ses_A Seryl-tRNA synthetase; 59.5 69 0.0023 32.6 11.4 41 384-424 67-107 (421)
179 3swf_A CGMP-gated cation chann 58.9 16 0.00055 29.7 5.3 27 378-404 4-30 (74)
180 1m1j_A Fibrinogen alpha subuni 58.8 1.1E+02 0.0037 32.5 12.7 62 373-434 110-175 (491)
181 3oa7_A Head morphogenesis prot 58.7 20 0.00067 34.1 6.6 44 383-426 32-75 (206)
182 4gkw_A Spindle assembly abnorm 58.5 1.1E+02 0.0036 27.7 11.2 42 383-424 114-162 (167)
183 1gk4_A Vimentin; intermediate 58.3 70 0.0024 25.6 10.2 51 370-420 22-72 (84)
184 2wuj_A Septum site-determining 58.0 10 0.00036 28.7 3.9 25 398-422 30-54 (57)
185 1wle_A Seryl-tRNA synthetase; 57.8 61 0.0021 34.1 10.9 31 391-421 119-149 (501)
186 2zqm_A Prefoldin beta subunit 57.6 35 0.0012 27.8 7.4 39 385-423 74-112 (117)
187 4e61_A Protein BIM1; EB1-like 57.5 29 0.00098 29.9 6.9 26 385-410 15-40 (106)
188 2dq0_A Seryl-tRNA synthetase; 57.1 38 0.0013 34.9 9.1 43 383-425 71-113 (455)
189 3q0x_A Centriole protein; cent 56.9 12 0.00042 35.9 5.0 42 374-415 178-219 (228)
190 1uii_A Geminin; human, DNA rep 56.8 24 0.00081 29.3 6.0 31 374-404 46-76 (83)
191 1deq_A Fibrinogen (alpha chain 56.7 22 0.00077 36.6 7.2 53 374-426 113-165 (390)
192 1kd8_B GABH BLL, GCN4 acid bas 56.0 20 0.00068 25.6 4.7 27 393-419 6-32 (36)
193 3mud_A DNA repair protein XRCC 56.0 40 0.0014 31.3 8.1 34 378-411 132-165 (175)
194 3vkg_A Dynein heavy chain, cyt 55.1 49 0.0017 42.3 11.1 38 383-420 2030-2067(3245)
195 3tnu_B Keratin, type II cytosk 55.1 13 0.00043 32.0 4.4 23 377-399 46-68 (129)
196 2oto_A M protein; helical coil 55.0 45 0.0015 29.3 8.1 20 378-397 61-80 (155)
197 1m1j_C Fibrinogen gamma chain; 55.0 9.3 0.00032 39.4 4.2 43 379-421 89-131 (409)
198 3m48_A General control protein 54.5 20 0.00069 25.1 4.4 26 393-418 5-30 (33)
199 3iv1_A Tumor susceptibility ge 54.4 71 0.0024 26.1 8.5 24 391-414 49-72 (78)
200 3c3g_A Alpha/beta peptide with 54.2 24 0.00082 24.7 4.8 28 392-419 4-31 (33)
201 3q0x_A Centriole protein; cent 54.1 31 0.0011 33.0 7.4 20 396-415 186-205 (228)
202 2oa5_A Hypothetical protein BQ 54.0 7.5 0.00025 33.8 2.7 24 397-420 10-33 (110)
203 2ocy_A RAB guanine nucleotide 53.8 73 0.0025 28.9 9.3 22 401-422 107-128 (154)
204 1joc_A EEA1, early endosomal a 53.5 68 0.0023 27.5 8.8 39 374-412 18-56 (125)
205 3vkg_A Dynein heavy chain, cyt 53.5 45 0.0015 42.6 10.4 14 383-396 2037-2050(3245)
206 2dq0_A Seryl-tRNA synthetase; 53.4 39 0.0013 34.8 8.5 31 392-422 73-103 (455)
207 2xzr_A Immunoglobulin-binding 53.3 1.1E+02 0.0037 26.3 10.8 47 373-419 61-107 (114)
208 3tnu_A Keratin, type I cytoske 52.3 1.1E+02 0.0038 26.1 10.2 47 373-419 76-122 (131)
209 3w03_C DNA repair protein XRCC 52.0 40 0.0014 31.4 7.5 31 375-405 153-183 (184)
210 3ghg_A Fibrinogen alpha chain; 52.0 41 0.0014 36.2 8.4 42 385-426 114-155 (562)
211 3c3f_A Alpha/beta peptide with 51.9 27 0.00093 24.6 4.8 28 392-419 5-32 (34)
212 3qh9_A Liprin-beta-2; coiled-c 51.8 45 0.0016 27.5 6.9 47 373-419 25-71 (81)
213 3ra3_B P2F; coiled coil domain 51.7 12 0.0004 25.0 2.8 14 386-399 5-18 (28)
214 3mq9_A Bone marrow stromal ant 51.5 1.1E+02 0.0038 30.4 11.3 26 396-421 437-462 (471)
215 1lwu_C Fibrinogen gamma chain; 51.0 26 0.00088 35.1 6.5 32 373-404 25-56 (323)
216 2fic_A Bridging integrator 1; 50.6 42 0.0014 30.8 7.5 22 379-400 188-209 (251)
217 3trt_A Vimentin; cytoskeleton, 50.6 69 0.0024 24.8 7.7 40 381-420 35-74 (77)
218 2zvf_A Alanyl-tRNA synthetase; 50.3 19 0.00064 31.4 4.8 32 377-408 28-59 (171)
219 3tnu_B Keratin, type II cytosk 49.7 1.2E+02 0.0042 25.8 10.2 47 374-420 75-121 (129)
220 1zxa_A CGMP-dependent protein 49.7 23 0.00079 28.2 4.7 32 371-402 22-53 (67)
221 3mov_A Lamin-B1; LMNB1, B-type 49.6 79 0.0027 26.2 8.3 45 375-419 38-82 (95)
222 3bbp_D GRIP and coiled-coil do 49.3 9 0.00031 30.9 2.3 19 387-405 42-60 (71)
223 3qne_A Seryl-tRNA synthetase, 49.3 56 0.0019 34.3 9.0 51 371-421 44-104 (485)
224 3jsv_C NF-kappa-B essential mo 49.1 1.1E+02 0.0037 25.9 9.0 61 361-421 10-87 (94)
225 1uo4_A General control protein 49.0 30 0.001 24.4 4.6 27 393-419 6-32 (34)
226 3ljm_A Coil Ser L9C; de novo d 48.5 23 0.0008 24.0 3.9 25 376-400 3-27 (31)
227 1ik9_A DNA repair protein XRCC 48.4 43 0.0015 31.5 7.2 23 377-399 142-164 (213)
228 2er8_A Regulatory protein Leu3 48.1 9.5 0.00032 28.8 2.3 22 373-394 48-69 (72)
229 3tq2_A KE1; parallel three hel 47.8 28 0.00097 24.3 4.3 31 391-421 4-34 (36)
230 2wq1_A General control protein 47.4 37 0.0013 23.8 4.8 28 392-419 4-31 (33)
231 4b4t_M 26S protease regulatory 47.2 14 0.00047 38.0 4.0 30 391-420 42-71 (434)
232 2b5u_A Colicin E3; high resolu 47.2 1.4E+02 0.0048 32.0 11.4 27 362-388 316-342 (551)
233 2zdi_C Prefoldin subunit alpha 47.1 46 0.0016 28.9 6.8 41 377-417 101-141 (151)
234 1kd8_A GABH AIV, GCN4 acid bas 47.1 34 0.0012 24.4 4.7 24 395-418 8-31 (36)
235 2aze_A Transcription factor DP 46.8 50 0.0017 30.1 7.1 17 370-386 22-38 (155)
236 3ol1_A Vimentin; structural ge 46.7 1.3E+02 0.0046 25.5 11.5 33 386-418 67-99 (119)
237 3uux_B Mitochondrial division 45.5 55 0.0019 31.8 7.5 51 373-423 176-226 (242)
238 3a5t_A Transcription factor MA 45.4 4.9 0.00017 34.6 0.3 36 389-424 59-94 (107)
239 1fmh_A General control protein 45.3 32 0.0011 23.6 4.2 23 399-421 5-27 (33)
240 1uix_A RHO-associated kinase; 45.1 70 0.0024 25.7 6.9 12 377-388 14-25 (71)
241 1wlq_A Geminin; coiled-coil; 2 45.1 61 0.0021 26.9 6.7 25 377-401 41-65 (83)
242 1s1c_X RHO-associated, coiled- 45.0 75 0.0026 25.6 7.1 30 378-407 3-32 (71)
243 1ytz_T Troponin T; muscle, THI 44.9 1.5E+02 0.005 25.3 11.1 46 378-424 46-91 (107)
244 2zvf_A Alanyl-tRNA synthetase; 44.9 13 0.00045 32.4 3.0 25 393-417 30-54 (171)
245 1gk6_A Vimentin; intermediate 44.4 1E+02 0.0034 23.3 8.0 47 373-419 6-52 (59)
246 1fxk_A Prefoldin; archaeal pro 44.4 53 0.0018 26.4 6.4 35 386-420 70-104 (107)
247 2lz1_A Nuclear factor erythroi 44.4 0.46 1.6E-05 40.0 -6.0 22 352-373 65-86 (90)
248 4ath_A MITF, microphthalmia-as 44.1 46 0.0016 27.5 5.8 31 374-404 49-79 (83)
249 2hy6_A General control protein 44.0 46 0.0016 23.5 4.9 28 392-419 5-32 (34)
250 2bni_A General control protein 43.6 35 0.0012 24.1 4.3 28 392-419 5-32 (34)
251 1g6u_A Domain swapped dimer; d 42.8 30 0.001 25.4 4.1 20 384-403 23-42 (48)
252 4dk0_A Putative MACA; alpha-ha 42.8 1E+02 0.0034 29.4 9.0 39 383-421 117-155 (369)
253 1l8d_A DNA double-strand break 42.7 79 0.0027 25.7 7.3 37 383-419 66-102 (112)
254 3he5_A Synzip1; heterodimeric 42.7 53 0.0018 24.2 5.4 29 376-404 12-40 (49)
255 2lq4_p Lysophosphatidic acid r 42.5 5 0.00017 32.1 -0.1 45 375-419 14-79 (80)
256 1ykh_B RNA polymerase II holoe 42.3 52 0.0018 28.7 6.3 35 380-414 91-125 (132)
257 1yke_B RNA polymerase II holoe 42.2 51 0.0018 29.5 6.4 41 379-419 90-130 (151)
258 3swk_A Vimentin; cytoskeleton, 42.1 39 0.0013 27.5 5.2 39 375-413 1-39 (86)
259 1m1j_B Fibrinogen beta chain; 42.1 1.9E+02 0.0065 30.3 11.5 16 350-365 103-118 (464)
260 3lss_A Seryl-tRNA synthetase; 41.5 98 0.0034 32.5 9.3 39 387-425 109-148 (484)
261 2wvr_A Geminin; DNA replicatio 41.4 78 0.0027 30.2 7.7 28 389-416 116-143 (209)
262 3he4_A Synzip6; heterodimeric 41.3 37 0.0013 25.7 4.4 36 375-410 18-53 (56)
263 2xu6_A MDV1 coiled coil; prote 41.2 64 0.0022 26.1 6.1 49 374-422 21-69 (72)
264 3jsv_C NF-kappa-B essential mo 41.1 1.6E+02 0.0056 24.8 9.3 44 374-417 40-90 (94)
265 2q6q_A Spindle POLE BODY compo 40.9 1.4E+02 0.0049 24.1 8.2 43 371-420 14-56 (74)
266 2zqm_A Prefoldin beta subunit 40.8 61 0.0021 26.4 6.3 31 378-408 74-104 (117)
267 2akf_A Coronin-1A; coiled coil 40.8 56 0.0019 22.5 4.8 26 378-403 3-28 (32)
268 2z5i_A TM, general control pro 40.3 82 0.0028 23.6 6.3 32 377-408 8-39 (52)
269 3viq_B Mating-type switching p 40.2 72 0.0025 26.5 6.5 21 374-394 8-28 (85)
270 1lwu_B Fibrinogen beta chain; 40.2 45 0.0015 33.3 6.3 28 393-420 33-60 (323)
271 3lss_A Seryl-tRNA synthetase; 40.0 1.1E+02 0.0037 32.2 9.4 28 394-421 109-137 (484)
272 2aze_A Transcription factor DP 40.0 65 0.0022 29.4 6.7 31 383-413 7-37 (155)
273 2z5i_A TM, general control pro 39.4 56 0.0019 24.5 5.2 38 381-418 5-42 (52)
274 1fxk_A Prefoldin; archaeal pro 39.0 95 0.0032 24.9 7.1 24 394-417 71-94 (107)
275 2v66_B Nuclear distribution pr 38.7 1.9E+02 0.0065 24.9 11.1 54 366-419 48-101 (111)
276 1fxk_C Protein (prefoldin); ar 38.7 72 0.0024 26.9 6.6 40 377-416 91-130 (133)
277 3sja_C Golgi to ER traffic pro 38.2 72 0.0025 25.3 5.9 43 378-420 10-57 (65)
278 3iox_A AGI/II, PA; alpha helix 38.1 75 0.0026 33.8 7.8 48 355-405 18-65 (497)
279 3mtu_A Tropomyosin alpha-1 cha 37.9 38 0.0013 27.0 4.4 46 374-419 16-61 (75)
280 4ani_A Protein GRPE; chaperone 37.9 56 0.0019 30.9 6.2 30 374-403 73-102 (213)
281 2dq3_A Seryl-tRNA synthetase; 37.9 43 0.0015 34.1 5.9 42 384-425 71-112 (425)
282 2efr_A General control protein 37.7 1.7E+02 0.0059 26.4 9.1 31 380-410 97-127 (155)
283 1l8d_A DNA double-strand break 37.7 79 0.0027 25.8 6.5 26 396-421 65-90 (112)
284 2zxx_A Geminin; coiled-coil, c 37.5 1.6E+02 0.0053 24.2 8.0 24 377-400 37-60 (79)
285 3rrk_A V-type ATPase 116 kDa s 37.5 66 0.0023 31.1 6.9 35 376-410 94-128 (357)
286 3q4f_C DNA repair protein XRCC 37.4 51 0.0017 30.9 5.7 28 377-404 157-184 (186)
287 2r2v_A GCN4 leucine zipper; co 37.3 67 0.0023 22.7 4.9 28 392-419 5-32 (34)
288 2yko_A LINE-1 ORF1P; RNA-bindi 37.2 39 0.0013 32.6 5.1 38 377-414 9-46 (233)
289 1m1j_C Fibrinogen gamma chain; 36.8 57 0.002 33.6 6.6 52 371-422 88-139 (409)
290 3sjb_C Golgi to ER traffic pro 36.3 35 0.0012 28.8 4.1 6 407-412 61-66 (93)
291 4dzo_A Mitotic spindle assembl 36.1 64 0.0022 28.0 5.9 30 374-403 4-33 (123)
292 1ses_A Seryl-tRNA synthetase; 35.7 77 0.0026 32.3 7.3 51 371-421 39-97 (421)
293 2wg5_A General control protein 35.5 31 0.0011 29.0 3.7 19 405-423 17-35 (109)
294 3s4r_A Vimentin; alpha-helix, 35.0 1.9E+02 0.0064 23.7 10.9 27 389-415 57-83 (93)
295 1lrz_A FEMA, factor essential 34.9 1E+02 0.0035 30.7 8.0 20 374-393 247-266 (426)
296 3fpp_A Macrolide-specific effl 34.4 2.7E+02 0.0094 26.0 10.5 26 396-421 122-147 (341)
297 4b4t_J 26S protease regulatory 34.3 42 0.0014 34.4 5.1 42 375-423 26-67 (405)
298 1m1j_B Fibrinogen beta chain; 34.2 2.9E+02 0.0098 29.0 11.4 26 393-418 173-198 (464)
299 3hhm_B NISH2 P85alpha; PI3KCA, 33.9 86 0.003 31.7 7.3 48 375-422 206-253 (373)
300 3ghg_C Fibrinogen gamma chain; 33.7 40 0.0014 34.9 4.9 47 373-419 90-136 (411)
301 4a3a_A Amphiphysin; structural 33.7 1.1E+02 0.0038 28.7 7.6 50 369-421 139-195 (243)
302 3viq_B Mating-type switching p 33.2 2E+02 0.0068 23.8 8.0 24 377-400 4-27 (85)
303 2gkw_A TNF receptor-associated 32.8 67 0.0023 28.7 5.7 33 377-409 3-35 (192)
304 2no2_A HIP-I, huntingtin-inter 32.7 2.2E+02 0.0077 24.0 10.8 35 385-419 58-92 (107)
305 2lf0_A Uncharacterized protein 32.7 64 0.0022 28.4 5.3 13 353-365 9-21 (123)
306 4b4t_J 26S protease regulatory 32.3 69 0.0024 32.8 6.3 25 380-404 38-62 (405)
307 3rrk_A V-type ATPase 116 kDa s 32.0 1.3E+02 0.0044 29.0 8.0 19 377-395 236-254 (357)
308 3vlc_E Golgi to ER traffic pro 31.9 24 0.00084 29.8 2.4 25 397-421 58-82 (94)
309 2w6b_A RHO guanine nucleotide 31.8 1.8E+02 0.0061 22.5 7.1 22 378-399 14-35 (56)
310 4e61_A Protein BIM1; EB1-like 31.7 1.8E+02 0.0061 25.0 7.8 23 379-401 16-38 (106)
311 2b9c_A Striated-muscle alpha t 31.6 2.7E+02 0.0094 24.6 9.5 75 354-428 38-127 (147)
312 2wg5_A General control protein 31.6 33 0.0011 28.9 3.2 21 396-416 15-35 (109)
313 3gp4_A Transcriptional regulat 31.5 2.5E+02 0.0085 24.1 9.6 18 377-394 91-108 (142)
314 2q6q_A Spindle POLE BODY compo 31.4 2E+02 0.0068 23.3 7.4 44 377-420 6-49 (74)
315 2odv_A Plectin 1, HD1; plakin 31.3 2.8E+02 0.0096 26.1 10.0 36 349-384 99-134 (235)
316 1gk4_A Vimentin; intermediate 31.2 2E+02 0.0068 22.9 8.0 48 372-419 31-78 (84)
317 2i1j_A Moesin; FERM, coiled-co 31.0 46 0.0016 35.3 5.0 42 375-416 336-377 (575)
318 2lw1_A ABC transporter ATP-bin 30.8 1.1E+02 0.0038 24.5 6.1 44 374-417 29-78 (89)
319 4dyl_A Tyrosine-protein kinase 30.6 4.1E+02 0.014 26.4 11.6 64 363-426 319-397 (406)
320 1zxa_A CGMP-dependent protein 30.6 68 0.0023 25.5 4.7 11 382-392 26-36 (67)
321 4b4t_L 26S protease subunit RP 30.4 50 0.0017 34.0 4.9 29 387-415 71-99 (437)
322 2j5u_A MREC protein; bacterial 30.3 24 0.00083 33.6 2.5 15 381-395 43-57 (255)
323 2ve7_A Kinetochore protein HEC 30.1 86 0.0029 30.8 6.4 31 373-403 184-214 (315)
324 3kin_B Kinesin heavy chain; mo 29.3 76 0.0026 27.0 5.2 10 377-386 99-108 (117)
325 3ra3_A P1C; coiled coil domain 29.2 27 0.00092 23.3 1.7 21 380-400 6-26 (28)
326 4b4t_L 26S protease subunit RP 29.1 54 0.0018 33.7 4.9 31 392-422 69-99 (437)
327 3zwh_Q Myosin-9; Ca-binding pr 29.1 21 0.00071 26.5 1.4 21 375-395 7-27 (45)
328 4ath_A MITF, microphthalmia-as 28.9 99 0.0034 25.5 5.5 38 373-421 38-75 (83)
329 2l5g_B Putative uncharacterize 28.8 1.1E+02 0.0039 22.4 5.2 31 378-408 6-36 (42)
330 4ati_A MITF, microphthalmia-as 28.7 33 0.0011 29.4 2.8 17 373-389 73-89 (118)
331 3q4f_C DNA repair protein XRCC 28.2 1E+02 0.0034 29.0 6.0 25 373-397 160-184 (186)
332 3k29_A Putative uncharacterize 27.9 3.6E+02 0.012 24.9 11.4 18 351-368 31-48 (169)
333 3n7n_E Monopolin complex subun 27.7 13 0.00044 31.6 0.0 31 386-416 41-71 (95)
334 3ljm_A Coil Ser L9C; de novo d 27.7 98 0.0034 21.0 4.3 18 402-419 8-25 (31)
335 2dq3_A Seryl-tRNA synthetase; 27.5 42 0.0014 34.2 3.8 30 392-421 72-101 (425)
336 2yo3_A General control protein 26.9 1.6E+02 0.0056 28.9 7.6 55 366-420 208-262 (268)
337 1j1d_C Troponin I, TNI; THIN f 26.5 1.7E+02 0.0059 25.9 7.0 25 400-424 84-108 (133)
338 2l5g_A GPS2 protein, G protein 26.2 97 0.0033 22.3 4.3 19 389-407 16-34 (38)
339 3vmx_A Voltage-gated hydrogen 25.8 2.1E+02 0.0073 21.5 7.2 26 376-401 13-38 (48)
340 3k66_A Beta-amyloid-like prote 25.8 2.7E+02 0.0091 27.0 8.7 54 373-426 37-95 (239)
341 3u0c_A Invasin IPAB, 62 kDa an 25.7 4.1E+02 0.014 24.8 10.9 79 346-424 64-146 (201)
342 2aze_B Transcription factor E2 25.7 1.5E+02 0.0052 25.0 6.3 34 376-409 8-41 (106)
343 1zme_C Proline utilization tra 25.4 79 0.0027 23.3 4.1 11 407-417 56-66 (70)
344 2xus_A Breast cancer metastasi 25.3 2E+02 0.0068 21.7 6.1 39 370-414 6-44 (49)
345 2pnv_A Small conductance calci 25.0 88 0.003 22.9 4.0 20 381-400 16-35 (43)
346 2ocy_A RAB guanine nucleotide 24.8 3.9E+02 0.013 24.1 10.9 61 361-421 73-148 (154)
347 1hwt_C Protein (heme activator 24.7 39 0.0013 25.7 2.3 23 372-394 56-78 (81)
348 3thf_A Protein shroom; coiled- 24.6 1.3E+02 0.0045 28.2 6.2 31 369-399 14-44 (190)
349 1x8y_A Lamin A/C; structural p 24.5 2.7E+02 0.0094 22.3 9.1 50 370-419 31-80 (86)
350 1t3j_A Mitofusin 1; coiled coi 24.4 1.6E+02 0.0054 24.9 6.1 41 377-421 50-90 (96)
351 3mud_A DNA repair protein XRCC 24.3 1.2E+02 0.0041 28.1 5.8 31 368-398 136-166 (175)
352 2e7s_A RAB guanine nucleotide 24.2 63 0.0021 28.8 3.8 20 402-421 96-115 (135)
353 3gwk_C SAG1039, putative uncha 24.0 1.6E+02 0.0055 22.8 5.9 10 377-386 32-41 (98)
354 3ni0_A Bone marrow stromal ant 23.8 2.9E+02 0.0098 23.5 7.5 20 403-422 68-87 (99)
355 2z73_A Rhodopsin; visual pigme 23.8 17 0.00057 34.9 0.0 11 15-25 256-266 (448)
356 3p7i_A PHND, subunit of alkylp 23.7 78 0.0027 30.3 4.7 48 348-395 265-312 (321)
357 3iox_A AGI/II, PA; alpha helix 23.7 2.5E+02 0.0087 29.8 8.8 29 392-420 77-105 (497)
358 1rtm_1 Mannose-binding protein 23.6 88 0.003 26.0 4.5 20 376-395 6-25 (149)
359 1a93_A Coiled coil, LZ, MYC pr 23.3 1.3E+02 0.0045 21.1 4.5 25 397-421 9-33 (34)
360 2p22_A Suppressor protein STP2 23.0 3.2E+02 0.011 25.1 8.4 37 379-415 54-90 (174)
361 1lq7_A Alpha3W; three helix bu 22.8 2.4E+02 0.0083 21.8 6.3 12 407-418 53-64 (67)
362 4avm_A Bridging integrator 2; 22.6 2.3E+02 0.0079 26.2 7.6 50 369-421 134-190 (237)
363 1uix_A RHO-associated kinase; 22.5 3E+02 0.01 22.1 8.0 24 382-405 5-28 (71)
364 1ytz_T Troponin T; muscle, THI 22.4 2.2E+02 0.0076 24.2 6.7 42 373-414 48-89 (107)
365 3swy_A Cyclic nucleotide-gated 22.4 2.3E+02 0.0078 21.0 5.9 25 375-399 6-30 (46)
366 1j1d_C Troponin I, TNI; THIN f 22.3 2E+02 0.0069 25.4 6.6 46 373-418 64-109 (133)
367 2yko_A LINE-1 ORF1P; RNA-bindi 22.0 2.3E+02 0.0078 27.3 7.5 29 377-405 16-44 (233)
368 3okq_A BUD site selection prot 21.9 4.4E+02 0.015 23.7 9.5 36 361-396 8-43 (141)
369 2aze_B Transcription factor E2 21.7 1.5E+02 0.005 25.0 5.4 28 374-401 13-40 (106)
370 3e98_A GAF domain of unknown f 21.6 1.3E+02 0.0044 28.5 5.7 31 375-405 80-113 (252)
371 4aj5_1 SKA3, spindle and kinet 21.5 3.8E+02 0.013 22.9 8.7 64 348-413 18-88 (101)
372 3gp4_A Transcriptional regulat 21.4 2.8E+02 0.0097 23.7 7.4 33 377-409 84-116 (142)
373 1gk7_A Vimentin; intermediate 21.3 1.5E+02 0.0051 21.0 4.6 18 381-398 20-37 (39)
374 4h10_A ARYL hydrocarbon recept 21.1 1.9E+02 0.0066 22.8 5.7 34 353-386 5-38 (73)
375 4fla_A Regulation of nuclear P 21.1 2.8E+02 0.0095 24.7 7.4 16 405-420 131-146 (152)
376 2l5g_B Putative uncharacterize 21.1 1.3E+02 0.0043 22.2 4.2 29 393-421 7-35 (42)
377 1fzc_C Fibrin; blood coagulati 21.0 35 0.0012 34.1 1.7 15 393-407 30-44 (319)
378 4ad8_A DNA repair protein RECN 20.9 2.9E+02 0.01 28.0 8.6 13 194-207 62-74 (517)
379 4i0x_B ESAT-6-like protein MAB 20.7 2.1E+02 0.0071 22.8 6.0 16 374-389 32-47 (103)
380 3plt_A Sphingolipid long chain 20.7 1.8E+02 0.0062 28.0 6.5 19 356-374 96-115 (234)
381 3kqg_A Langerin, C-type lectin 20.6 1.1E+02 0.0038 26.1 4.6 42 378-419 3-47 (182)
382 2xnx_M M protein, M1-BC1; cell 20.6 3.7E+02 0.013 24.3 8.1 76 346-421 12-99 (146)
383 2k48_A Nucleoprotein; viral pr 20.5 3.4E+02 0.012 23.4 7.4 17 391-407 85-101 (107)
384 3zbh_A ESXA; unknown function, 20.3 2.2E+02 0.0074 21.7 5.9 24 396-419 57-80 (99)
385 1j1e_C Troponin I, TNI; THIN f 20.3 2.4E+02 0.0083 26.2 7.0 43 374-423 65-107 (180)
386 3n5l_A Binding protein compone 20.3 1.1E+02 0.0039 28.7 5.0 47 349-395 257-303 (310)
387 3vp9_A General transcriptional 20.1 3.9E+02 0.013 22.4 8.2 16 408-423 74-89 (92)
388 3tq2_A KE1; parallel three hel 20.0 2.3E+02 0.0079 19.7 5.5 31 377-407 4-34 (36)
No 1
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=99.46 E-value=7e-14 Score=107.32 Aligned_cols=53 Identities=34% Similarity=0.515 Sum_probs=49.7
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 353 KRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYE 405 (453)
Q Consensus 353 KReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~ 405 (453)
||++|+++||+||++||.||++|+++||.+|..|+.||..|..++..|++++.
T Consensus 1 kr~rR~~~NResA~rSR~RKk~~~~~LE~~v~~L~~eN~~L~~~~~~L~~~~~ 53 (55)
T 1dh3_A 1 KREVRLMKNREAARESRRKKKEYVKSLENRVAVLENQNKTLIEELKALKDLYS 53 (55)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred ChHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 57899999999999999999999999999999999999999999999887653
No 2
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=99.35 E-value=3.6e-12 Score=98.83 Aligned_cols=55 Identities=40% Similarity=0.537 Sum_probs=49.4
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 353 KRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQL 407 (453)
Q Consensus 353 KReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L 407 (453)
||++|+++||+||++||.||++++++|+.+|+.|+.+|..|..++..|++++..|
T Consensus 1 kR~~r~erNr~AA~k~R~rKk~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~L 55 (61)
T 1t2k_D 1 KRRKFLERNRAAASRSRQKRKVWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQL 55 (61)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6889999999999999999999999999999999999999999988855554443
No 3
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=99.34 E-value=6.7e-12 Score=98.17 Aligned_cols=57 Identities=30% Similarity=0.487 Sum_probs=51.6
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 353 KRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLA 409 (453)
Q Consensus 353 KReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~s 409 (453)
||++|+++||+||++||.||++++++|+.+|+.|+.+|..|..+|..|++++..|..
T Consensus 2 kr~rrrerNR~AA~rcR~rKk~~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~ 58 (63)
T 2wt7_A 2 KRRIRRERNKMAAAKCRNRRRELTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEF 58 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999999999887666655543
No 4
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=99.27 E-value=8.6e-12 Score=97.07 Aligned_cols=55 Identities=33% Similarity=0.481 Sum_probs=48.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 353 KRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQL 407 (453)
Q Consensus 353 KReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L 407 (453)
|+++|+++||+||++||.||++++++|+.+|+.|+.+|..|..++..|++++..|
T Consensus 1 K~errr~rNr~AA~k~R~rKk~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~L 55 (62)
T 1jnm_A 1 KAERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQVAQL 55 (62)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999999999999988855554433
No 5
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=99.25 E-value=9.3e-12 Score=97.91 Aligned_cols=50 Identities=32% Similarity=0.472 Sum_probs=44.1
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 356 RRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYE 405 (453)
Q Consensus 356 RRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~ 405 (453)
+++.+||+||+|||.||++++++|+.+|+.|+.+|..|..++..|++++.
T Consensus 12 ~KR~rNreAArrsR~RK~~~~~~Le~~v~~L~~eN~~L~~ev~~Lr~~l~ 61 (63)
T 2dgc_A 12 LKRARNTEAARRSRARKLQRMKQLEDKVEELLSKNYHLENEVARLKKLVG 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44455999999999999999999999999999999999999999887754
No 6
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=99.16 E-value=6.7e-11 Score=92.77 Aligned_cols=61 Identities=25% Similarity=0.420 Sum_probs=47.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 352 LKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 352 lKReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
+|+++++++||.||+|||.||++++++|+.+++.|+.+|..|..+++.| +.|+..|+..|.
T Consensus 1 ~k~~rKr~rNr~AA~R~R~KKk~~~~~le~~~~~L~~~N~~L~~~i~~L-------~~E~~~Lk~ll~ 61 (63)
T 1ci6_A 1 MKKLKKMEQNKTAATRYRQKKRAEQEALTGECKELEKKNEALKERADSL-------AKEIQYLKDLIE 61 (63)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHH
T ss_pred CchHhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHh
Confidence 3688999999999999999999999999999999999999999998885 455566665554
No 7
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=99.10 E-value=2.3e-10 Score=92.04 Aligned_cols=61 Identities=33% Similarity=0.361 Sum_probs=57.7
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 355 QRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLK 415 (453)
Q Consensus 355 eRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr 415 (453)
.||+..||.|+|.+|.||++|+.+||.+|..|+.+|..|..++..|+.++..|..||..|+
T Consensus 10 ~kR~~qNR~AQRafReRK~~~i~~LE~~v~~le~~~~~l~~en~~Lr~~i~~L~~El~~lr 70 (70)
T 1gd2_E 10 SKRKAQNRAAQRAFRKRKEDHLKALETQVVTLKELHSSTTLENDQLRQKVRQLEEELRILK 70 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHC-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4889999999999999999999999999999999999999999999999999999998875
No 8
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=98.85 E-value=8.1e-09 Score=86.14 Aligned_cols=64 Identities=23% Similarity=0.335 Sum_probs=51.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 353 KRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 353 KReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
+...|+.+|.+||++||.++++..++++.+++.|+.||..|+.+|.. |..|+..|+..|..+.+
T Consensus 15 ~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~-------L~~E~~~Lr~ll~~~p~ 78 (87)
T 1hjb_A 15 EYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQ-------LSRELSTLRNLFKQLPE 78 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHCcH
Confidence 34566789999999999999999999999999999999999999888 45556666666666554
No 9
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=98.78 E-value=1.8e-08 Score=82.50 Aligned_cols=59 Identities=22% Similarity=0.308 Sum_probs=49.5
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 354 RQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 354 ReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
...|+.+|.+||+|||.++++...+++.+|+.|+.||..|+.+|..|+.+ +..|+..|.
T Consensus 16 Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E-------~~~Lr~ll~ 74 (78)
T 1gu4_A 16 YKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRE-------LSTLRNLFK 74 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHTTTC
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHH
Confidence 34557899999999999999999999999999999999999999885554 555555444
No 10
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}
Probab=98.67 E-value=6.6e-10 Score=95.87 Aligned_cols=53 Identities=28% Similarity=0.412 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 347 QDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTR 399 (453)
Q Consensus 347 ~DErElKReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~ 399 (453)
++..++|.+||+++||.+|+.||.||.+++++||.++..|..+...|..|+..
T Consensus 31 ~e~~~lK~~RR~lKNR~yAq~CR~rk~~~~~~LE~e~~~L~~e~e~L~~En~~ 83 (107)
T 3a5t_A 31 EEIIQLKQRRRTLKNRGYAASCRVKRVTQKEELEKQKAELQQEVEKLASENAS 83 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSTTTTTTSTTSH
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999986666555554444444433
No 11
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=98.32 E-value=3.4e-06 Score=70.88 Aligned_cols=67 Identities=24% Similarity=0.345 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 349 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 349 ErElKReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
-.++|..||.++||.+|+-||.||.++.++||.++..|..+...|+.|+. .+..|...++.++..|.
T Consensus 23 v~~lKq~RRtlKNRgyAq~CR~Kr~~q~~~LE~e~~~L~~e~~~L~~e~~-------~~~~e~d~~k~k~~~L~ 89 (90)
T 2wt7_B 23 VIRLKQKRRTLKNRGYAQSCRYKRVQQKHHLENEKTQLIQQVEQLKQEVS-------RLARERDAYKVKSEKLA 89 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHhc
Confidence 36788999999999999999999999998888777766665555555554 46666777777776664
No 12
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=97.55 E-value=0.00016 Score=53.14 Aligned_cols=40 Identities=30% Similarity=0.403 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
|+|+.+||.++.+|+..|.+|..+++. |..||..||+.|.
T Consensus 2 KaYl~eLE~r~k~le~~naeLEervst-------Lq~EN~mLRqvl~ 41 (42)
T 2oqq_A 2 SAYLSELENRVKDLENKNSELEERLST-------LQNENQMLRHILK 41 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHH-------HHHhHHHHHHHhc
Confidence 589999999999999999999988887 7888999998875
No 13
>1deb_A APC protein, adenomatous polyposis coli protein; coiled coil, tumor suppressor, structural protein; 2.40A {Homo sapiens} SCOP: h.1.18.1
Probab=96.40 E-value=0.0072 Score=46.17 Aligned_cols=48 Identities=33% Similarity=0.464 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
.+.|-++|+.|+.||..|+.|++.=..++.+|+.|-.-+++-|..+.+
T Consensus 5 YdQL~~QVe~Lk~ENshLrrEL~dNS~~lskLE~ets~mKevlk~lq~ 52 (54)
T 1deb_A 5 YDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQG 52 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhhHHHHHHHHhhhhhHHHHHHHHcc
Confidence 578999999999999999999999999999999999999998877653
No 14
>1skn_P DNA-binding domain of SKN-1; complex (transcription factor/DNA), transcription/DNA complex; HET: DNA LDA; 2.50A {Caenorhabditis elegans} SCOP: a.37.1.1
Probab=95.92 E-value=0.0036 Score=52.74 Aligned_cols=32 Identities=25% Similarity=0.513 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Q 036551 350 RELKRQRRKQSNRESARRSRLRKQAECDELAQ 381 (453)
Q Consensus 350 rElKReRRKqsNRESARRSR~RKqaelEeLE~ 381 (453)
...|.+||+.+||.+|++||.||.+..++|+.
T Consensus 59 ~~ir~~RRR~KNr~AA~~CRkrK~~~~d~l~~ 90 (92)
T 1skn_P 59 QLIRKIRRRGKNKVAARTCRQRRTDRHDKMSH 90 (92)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhc
Confidence 34577899999999999999999999888753
No 15
>2w6a_A ARF GTPase-activating protein GIT1; PIX, zinc, signaling protein, CAT-1, cytoplasm, ANK repeat, coiled-coil, zinc-finger, metal-binding; 1.40A {Rattus norvegicus}
Probab=95.75 E-value=0.035 Score=43.71 Aligned_cols=41 Identities=27% Similarity=0.404 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKE 416 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~ 416 (453)
+..-|.+|++|.+-|+.|..|+..++.++++|.+||..||.
T Consensus 22 LaaSeAkiQQLmkVN~~ls~Elr~mQ~~lq~LQsen~~Lr~ 62 (63)
T 2w6a_A 22 LATSEAKVQQLMKVNSSLSDELRKLQREIHKLQAENLQLRQ 62 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhhHHHHHHHHHHhHhhhHHHHHHHHHHHHHHhhhhhhcc
Confidence 34557889999999999999999999999999999999984
No 16
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=95.54 E-value=0.046 Score=46.74 Aligned_cols=25 Identities=28% Similarity=0.320 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 400 IRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 400 Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
.+++.++|+.|+..||.+|..+...
T Consensus 73 ~~~~~e~Lq~E~erLr~~v~~lEeg 97 (100)
T 1go4_E 73 LREDHSQLQAECERLRGLLRAMERG 97 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4577889999999999999988764
No 17
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=95.10 E-value=0.065 Score=45.92 Aligned_cols=50 Identities=28% Similarity=0.266 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 373 QAECDELAQRADALKEENASLRS-------EVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~-------el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
-+++-+||.+++.|+.||..|+. ++..|..++++|+.||..|+.+-..-.
T Consensus 36 IqEYl~LE~~~s~le~e~~rlr~~~~~~~~~v~eLe~everL~~ENq~L~~e~~~~~ 92 (104)
T 3s9g_A 36 IKEYLELEKSLSRMEDENNRLRLESKRLDARVRELELELDRLRAENLQLLTENELHR 92 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 34556677777777777777666 667777777777777777776654433
No 18
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=95.01 E-value=0.083 Score=43.67 Aligned_cols=46 Identities=35% Similarity=0.400 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
.+.-|+.++++|+.+|..|..+++.++...+.|..||..|+++...
T Consensus 21 tI~lLqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~ 66 (81)
T 2jee_A 21 TITLLQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNG 66 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 3455666777777777777777777666666666666666655443
No 19
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=94.92 E-value=0.15 Score=46.44 Aligned_cols=78 Identities=17% Similarity=0.077 Sum_probs=60.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccc
Q 036551 352 LKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQEDERS 429 (453)
Q Consensus 352 lKReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~~~is~ 429 (453)
.+..+...+.+.+.++.-.....++++-..-++.|..|...|..++..+.++..+|+.||..|-+++..--.+++-.+
T Consensus 67 ~~~I~~L~~El~~l~~ki~dLeeel~eK~K~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~RWM~rk~qEAe~M 144 (152)
T 3a7p_A 67 LNTLAILQKELKSKEQEIRRLKEVIALKNKNTERLNAALISGTIENNVLQQKLSDLKKEHSQLVARWLKKTEKETEAM 144 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555556667777778889999999999999999999999999999999999888777666554
No 20
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=94.64 E-value=0.099 Score=46.49 Aligned_cols=51 Identities=18% Similarity=0.180 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 372 KQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 372 KqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
.+++++.|+.+++.+..|+..|+.++..++.+++.+..|+..|+.++..|.
T Consensus 73 ~~~~~~~L~~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~ 123 (138)
T 3hnw_A 73 AKKMADSLSLDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQ 123 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455555666655555555555555555555555555555555544443
No 21
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=93.98 E-value=0.24 Score=36.64 Aligned_cols=45 Identities=20% Similarity=0.296 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
-+..||.+|..|+.||..|+++.---+.-+.-|+.|...||.+|.
T Consensus 4 lvaqlenevaslenenetlkkknlhkkdliaylekeianlrkkie 48 (49)
T 3he5_A 4 LVAQLENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKIE 48 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhcccHHHHHhcccHHHHHHHHHHHHHHHHHHhc
Confidence 356899999999999999999887777778889999999998875
No 22
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=93.71 E-value=0.065 Score=37.61 Aligned_cols=27 Identities=26% Similarity=0.471 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRN 402 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lke 402 (453)
+..||.+|++|-.+|..|..|+.+|++
T Consensus 2 M~QLE~kVEeLl~~n~~Le~EV~RLk~ 28 (33)
T 3m48_A 2 MAQLEAKVEELLSKNWNLENEVARLKK 28 (33)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 568999999999999999999888765
No 23
>2jee_A YIIU; FTSZ, septum, coiled-coil, cell division, cell cycle, hypothetical protein; 2.8A {Escherichia coli}
Probab=93.59 E-value=0.15 Score=42.20 Aligned_cols=53 Identities=21% Similarity=0.320 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 372 KQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 372 KqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
=|.++++|..+-..|..+|+.++.....|..++++|..|-....++|..|-|+
T Consensus 25 LqmEieELKekN~~L~~e~~e~~~~~~~L~~en~qLk~E~~~wq~Rl~~LLgk 77 (81)
T 2jee_A 25 LQMEIEELKEKNNSLSQEVQNAQHQREELERENNHLKEQQNGWQERLQALLGR 77 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 35677888888888888888877777777777777777777777777665543
No 24
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=93.38 E-value=0.092 Score=37.02 Aligned_cols=28 Identities=25% Similarity=0.405 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRN 402 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lke 402 (453)
++..||.+|++|-.+|+.|..++.+|++
T Consensus 2 RMnQLE~kVEeLl~~n~~Le~eV~rLk~ 29 (34)
T 2oxj_A 2 RMXQLEXKVXELLXKNXHLEXEVXRLKX 29 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 4778999999999999998888888765
No 25
>2c9l_Y EB1, zebra, BZLF1 trans-activator protein; viral protein, epstein-BARR virus, EBV; 2.25A {Human herpesvirus 4} SCOP: h.1.3.1 PDB: 2c9n_Y
Probab=93.37 E-value=0.37 Score=37.53 Aligned_cols=38 Identities=29% Similarity=0.309 Sum_probs=25.6
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 356 RRKQSNRESARRSRLRKQAECDELAQRADALKEENASL 393 (453)
Q Consensus 356 RRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~L 393 (453)
+.+-+||.++|+||.|=++.++...+-...-..||..|
T Consensus 4 ~kryknr~asrk~rakfkn~lqh~r~vaaaks~en~rl 41 (63)
T 2c9l_Y 4 IKRYKNRVAARKSRAKFKQLLQHYREVAAAKSSENDRL 41 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH
Confidence 44578999999999998887766554444433444333
No 26
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=93.31 E-value=0.46 Score=48.68 Aligned_cols=44 Identities=16% Similarity=0.330 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 379 LAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 379 LE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
+.++.+.|+.|...|+.+++..+++...|..|+..++++|+.+.
T Consensus 535 ~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~ 578 (597)
T 3oja_B 535 KQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLE 578 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 33344444444444444444444555555555555555554443
No 27
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=92.57 E-value=0.7 Score=47.33 Aligned_cols=49 Identities=22% Similarity=0.266 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 372 KQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 372 KqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
++++++.|+++++.|+.+....++++.+|+++.+.++.|..+|.+++..
T Consensus 535 ~~~~~~~~~~~~~~le~~~~~~~~~~~~l~~e~~~~~~~~~~l~~~~~~ 583 (597)
T 3oja_B 535 KQKETEDLEQENIALEKQLDNKRAKQAELRQETSLKRQKVKQLEAKKNR 583 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred hhcchhhHHhhhHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3344555555555555555555555555555555555555555444443
No 28
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=92.53 E-value=0.19 Score=35.79 Aligned_cols=31 Identities=19% Similarity=0.407 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYE 405 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~ 405 (453)
++..||.+|++|-.+|..|..++.+|++-+.
T Consensus 2 RMnQLE~KVEeLl~~~~~Le~eV~RLk~ll~ 32 (36)
T 1kd8_B 2 KVKQLKAKVEELKSKLWHLKNKVARLKKKNA 32 (36)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 5788999999999999999999988876543
No 29
>3hnw_A Uncharacterized protein; coiled-coil, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.20A {Eubacterium eligens}
Probab=92.49 E-value=0.53 Score=41.79 Aligned_cols=48 Identities=13% Similarity=0.154 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
+.+++++.++..|+.++..++.++..+++++.+|..++..|..++..+
T Consensus 82 ~~l~~~~kE~~~lK~el~~~~~k~e~~~~e~~~l~~~~~~l~~~~~~l 129 (138)
T 3hnw_A 82 LDIENKDKEIYDLKHELIAAQIKAESSAKEIKELKSEINKYQKNIVKL 129 (138)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455555555555555555555555555555555554444443
No 30
>2wt7_A Proto-oncogene protein C-FOS; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 1fos_E* 1a02_F* 1s9k_D
Probab=92.18 E-value=1 Score=34.79 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 382 RADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 382 rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
.+..|+.+...|..++..|+.++..|..|...|+..|.
T Consensus 24 ~~~~Le~~v~~L~~~n~~L~~ei~~L~~e~~~Lk~~l~ 61 (63)
T 2wt7_A 24 LTDTLQAETDQLEDEKSALQTEIANLLKEKEKLEFILA 61 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47788888888888888888888888888888887764
No 31
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=92.16 E-value=0.14 Score=36.45 Aligned_cols=31 Identities=26% Similarity=0.414 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYE 405 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~ 405 (453)
++..||.+|++|..+|..|..++.+|++.+.
T Consensus 2 RMnQLE~kVEeLl~~~~~Le~EV~RL~~ll~ 32 (36)
T 1kd8_A 2 EVKQLEAEVEEIESEVWHLENEVARLEKENA 32 (36)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 4678999999999999999999988876544
No 32
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=92.11 E-value=0.45 Score=35.92 Aligned_cols=41 Identities=17% Similarity=0.184 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 380 AQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 380 E~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
++++..|+.-|..|..++..|+..|.+++.|+..|+.-|..
T Consensus 3 eq~l~kLKe~n~~L~~kv~~Le~~c~~~eQEieRL~~LLkq 43 (48)
T 3vmx_A 3 ERQILRLKQINIQLATKIQHLEFSCSEKEQEIERLNKLLKQ 43 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 57888999999999999999999999999999999988764
No 33
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=91.91 E-value=0.19 Score=35.40 Aligned_cols=29 Identities=10% Similarity=0.184 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee 403 (453)
++..||.+|++|-.+|..|..|+.+|++-
T Consensus 2 RMnQLEdKVEeLl~~~~~Le~EV~RLk~l 30 (34)
T 3c3f_A 2 RMXQIEXKLEXILSXLYHXENEXARIXKL 30 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 57789999999999999999888887653
No 34
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=91.67 E-value=0.34 Score=37.63 Aligned_cols=41 Identities=17% Similarity=0.191 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 380 AQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 380 E~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
|+++..|+..|-.|..+++.|+.+|.+.+.|+..|..-|.+
T Consensus 10 e~q~~kLKq~n~~L~~kv~~Le~~c~e~eQEieRL~~LLkq 50 (58)
T 3a2a_A 10 ERQLLRLKQMNVQLAAKIQHLEFSCSEKEQEIERLNKLLRQ 50 (58)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45777888889999999999999999999999999887764
No 35
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=91.60 E-value=0.13 Score=50.05 Aligned_cols=44 Identities=23% Similarity=0.310 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKE 416 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~ 416 (453)
...+.+|+.++..|..+|..|..++..+++++.+|+.|+..|++
T Consensus 53 ~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL~s 96 (251)
T 3m9b_A 53 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLGQ 96 (251)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44566788888888888888888888877777777777776653
No 36
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=91.57 E-value=0.5 Score=38.39 Aligned_cols=50 Identities=20% Similarity=0.127 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
+++++||.++..++.-...|...+.....++..|..+.+.|.++|..+..
T Consensus 14 ~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~rl~~~~~ 63 (78)
T 3efg_A 14 ARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLEDLGKVRS 63 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 57899999999999999999999999999999999999999999988775
No 37
>2wt7_B Transcription factor MAFB; transcription, transcription regulation, nucleus, activator, repressor, DNA-binding, phosphoprotein, differentiation; 2.30A {Mus musculus} PDB: 2wty_A* 1k1v_A
Probab=91.55 E-value=1.7 Score=36.48 Aligned_cols=30 Identities=27% Similarity=0.275 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
.|..++..|..+.+.|..||..+..++..+
T Consensus 52 ~LE~e~~~L~~e~~~L~~e~~~~~~e~d~~ 81 (90)
T 2wt7_B 52 HLENEKTQLIQQVEQLKQEVSRLARERDAY 81 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444555555555555443
No 38
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=91.25 E-value=0.24 Score=40.67 Aligned_cols=48 Identities=23% Similarity=0.367 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
+++++.++++.++.+|+.|..+|..|+..++.-..+-..++.+|..+.
T Consensus 7 e~e~~~~klq~~E~rN~~Le~~v~~le~~Le~s~~~q~~~~~Elk~l~ 54 (79)
T 3cvf_A 7 EREETQQKVQDLETRNAELEHQLRAMERSLEEARAERERARAEVGRAA 54 (79)
T ss_dssp ---CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666666666666666666666666666666655555555555443
No 39
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=91.18 E-value=0.41 Score=36.35 Aligned_cols=32 Identities=31% Similarity=0.564 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 382 RADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 382 rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
.|+.|+.||..|+. +++.|..++.+|+.+|..
T Consensus 20 d~eaLk~E~~eLk~-------k~~~L~~~~~el~~~l~~ 51 (53)
T 2yy0_A 20 EIELLRLELAEMKE-------KYEAIVEENKKLKAKLAQ 51 (53)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHhc
Confidence 44555555555444 445566666677766653
No 40
>1jnm_A Proto-oncogene C-JUN; BZIP, protein-DNA complex, transcription/DNA complex; 2.20A {Homo sapiens} SCOP: h.1.3.1 PDB: 1fos_F 2h7h_A 1t2k_C 1a02_J* 1s9k_E 1jun_A
Probab=91.12 E-value=0.6 Score=35.85 Aligned_cols=39 Identities=21% Similarity=0.320 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 381 QRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 381 ~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
..+..|+.+...|..++..|..++..|..|+..|+..|.
T Consensus 22 ~~~~~Le~~v~~L~~~n~~L~~~v~~L~~e~~~Lk~~l~ 60 (62)
T 1jnm_A 22 ERIARLEEKVKTLKAQNSELASTANMLREQVAQLKQKVM 60 (62)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446666666666666666666666666666666665553
No 41
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=91.07 E-value=0.35 Score=33.90 Aligned_cols=28 Identities=7% Similarity=0.214 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee 403 (453)
+..||.+|++|-.+|..|..|+.+|++-
T Consensus 2 MnQLEdKvEeLl~~~~~Le~EV~RLk~l 29 (33)
T 3c3g_A 2 MKXIEXKLXEIXSKXYHXENXLARIKXL 29 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 5789999999999999999888887653
No 42
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=91.07 E-value=0.95 Score=39.79 Aligned_cols=42 Identities=24% Similarity=0.362 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 380 AQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 380 E~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
..+|++|+.|+..|..+|+.+..+.++|+.+|..|..+|..-
T Consensus 70 q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~~r~~~~ 111 (121)
T 3mq7_A 70 QKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIADK 111 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhHhhhc
Confidence 345778888888888888888888888888888888887654
No 43
>1t6f_A Geminin; coiled-coil, cell cycle; 1.47A {Synthetic} SCOP: h.1.28.1
Probab=90.99 E-value=0.32 Score=34.78 Aligned_cols=30 Identities=37% Similarity=0.458 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 387 KEENASLRSEVTRIRNEYEQLLAENASLKE 416 (453)
Q Consensus 387 e~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~ 416 (453)
-.||..|..+|..-.+++..|+.||.+|++
T Consensus 6 L~ENekLhk~ie~KdeeIa~Lk~eN~eL~E 35 (37)
T 1t6f_A 6 LKENEKLHKEIEQKDNEIARLKKENKELAE 35 (37)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHh
Confidence 368999999999999999999999999874
No 44
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=90.99 E-value=0.96 Score=51.53 Aligned_cols=21 Identities=24% Similarity=0.235 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCC
Q 036551 402 NEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 402 ee~~~L~sEN~~Lr~qL~~L~ 422 (453)
++...|+.||..|++++.++.
T Consensus 1023 ~kv~~L~~e~~~L~qq~~~l~ 1043 (1080)
T 2dfs_A 1023 QLVSELKEQNTLLKTEKEELN 1043 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 444456666667776666655
No 45
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=90.91 E-value=0.26 Score=34.81 Aligned_cols=28 Identities=11% Similarity=0.368 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRN 402 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lke 402 (453)
++..||.+|++|-.+|..|..|+.+|++
T Consensus 2 RMnQLEdKvEeLl~~~~~L~~EV~RLk~ 29 (34)
T 2bni_A 2 RMKQIEDKLEEILSKGHHICNELARIKK 29 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 5678999999999999999998888765
No 46
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=90.83 E-value=0.26 Score=34.75 Aligned_cols=28 Identities=11% Similarity=0.362 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRN 402 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lke 402 (453)
++..||.+|++|-.+|..|..|+.+|++
T Consensus 2 RM~QLEdKVEeLl~~n~~Le~EV~RLk~ 29 (34)
T 1uo4_A 2 RMKQIEDKGEEILSKLYHIENELARIKK 29 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4678999999999999999988888765
No 47
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=90.59 E-value=0.72 Score=35.02 Aligned_cols=39 Identities=26% Similarity=0.328 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASL 414 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~L 414 (453)
+.+|..++..|.+.|..|...+...++++..|..|...|
T Consensus 11 ~~~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~L 49 (51)
T 3m91_A 11 IHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRL 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445666677777777777666666666665555555444
No 48
>3m91_A Proteasome-associated ATPase; coil COIL alpha helix, ATP-binding, chaperone, nucleotide-BI proteasome, S-nitrosylation; 1.80A {Mycobacterium tuberculosis} PDB: 3m9h_A
Probab=90.33 E-value=1 Score=34.20 Aligned_cols=43 Identities=14% Similarity=0.224 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 380 AQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 380 E~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
+.++.+|+.++..|..++..|.+-+...+.|...|+++|..+.
T Consensus 8 ~~r~~~l~~~l~~L~~rN~rL~~~L~~AR~el~~Lkeele~La 50 (51)
T 3m91_A 8 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLG 50 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5677788888888888888888888888888888888887664
No 49
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=90.09 E-value=0.33 Score=34.20 Aligned_cols=29 Identities=24% Similarity=0.393 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee 403 (453)
++..||.+|++|-.+|..|..++.+|++-
T Consensus 2 RMnQLEdkVEeLl~~~~~Le~eV~RL~~l 30 (34)
T 2hy6_A 2 KVKQLADAVEELASANYHLANAVARLAKA 30 (34)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46789999999999999999888887653
No 50
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=89.93 E-value=1.4 Score=35.24 Aligned_cols=34 Identities=15% Similarity=0.205 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 390 NASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 390 N~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
...|..++..|.++.+.|..||..|+.+|..+.+
T Consensus 49 I~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~L~~ 82 (83)
T 1nkp_B 49 IQYMRRKNHTHQQDIDDLKRQNALLEQQVRALGG 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3456666666777777788888888888888764
No 51
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=89.54 E-value=1.3 Score=38.04 Aligned_cols=48 Identities=19% Similarity=0.157 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
+..++++++.+.+|.+|+.....++..++..+..|..+...|+.+|..
T Consensus 36 KD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~L~q 83 (103)
T 4h22_A 36 KDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEALKQ 83 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888888888888888888888888888888888888888765
No 52
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=89.46 E-value=0.58 Score=32.82 Aligned_cols=27 Identities=11% Similarity=0.145 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRN 402 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lke 402 (453)
+.+||.+|++|-.+|..|..|+.+|++
T Consensus 2 MnQLEdKVEell~~~~~le~EV~Rl~~ 28 (33)
T 2wq1_A 2 MKQLEDKIEENTSKIYHNTNEIARNTK 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 578999999999999998888888664
No 53
>1hjb_A Ccaat/enhancer binding protein beta; transcription/DNA, protein-DNA complex; HET: DNA; 3.0A {Homo sapiens} SCOP: h.1.3.1
Probab=89.46 E-value=2.2 Score=35.45 Aligned_cols=61 Identities=26% Similarity=0.441 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 349 ERELKRQRRKQSNRESARRSR---LRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLA 409 (453)
Q Consensus 349 ErElKReRRKqsNRESARRSR---~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~s 409 (453)
+-..||.|=-+.-|.|-...| .--+.++++|+.+-..|+.+...|..|+..|+.-+.++-.
T Consensus 15 ~Y~~rR~rNN~AarrSR~krk~r~~e~~~r~~~Le~EN~~Lr~~v~~L~~E~~~Lr~ll~~~p~ 78 (87)
T 1hjb_A 15 EYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLFKQLPE 78 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcH
Confidence 344455554444444443333 3446678999999999999999999999998877665544
No 54
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=89.39 E-value=0.64 Score=35.32 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee 403 (453)
++.|..++++|+.++..|..+++.|+.+
T Consensus 21 ~eaLk~E~~eLk~k~~~L~~~~~el~~~ 48 (53)
T 2yy0_A 21 IELLRLELAEMKEKYEAIVEENKKLKAK 48 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444443
No 55
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=89.37 E-value=0.73 Score=37.27 Aligned_cols=44 Identities=11% Similarity=0.279 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
++.++++.++.+|+.|..+|..|+..++.-..+-..++.+|..+
T Consensus 4 ~~~~kLq~~E~~N~~Le~~v~~le~~Le~s~~~q~~~~~Elk~~ 47 (72)
T 3cve_A 4 NSHMKLQEVEIRNKDLEGQLSEMEQRLEKSQSEQDAFRSNLKTL 47 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555556666666666666666555555555555554444443
No 56
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=88.33 E-value=1 Score=46.13 Aligned_cols=52 Identities=19% Similarity=0.196 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
.+++++|++++++|+.++..+..++..+++++.+.+.+.+.|..+|.++.+.
T Consensus 9 ~~el~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~gn 60 (412)
T 3u06_A 9 STEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRDN 60 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4577888888888888888888899999988888888888999999888775
No 57
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=87.12 E-value=1.2 Score=45.25 Aligned_cols=53 Identities=15% Similarity=0.142 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 372 KQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 372 KqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
.++++++|++++++|+.++..|..++..|++++.+.+.+-+.|..+|.++.+.
T Consensus 8 ~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elkgn 60 (403)
T 4etp_A 8 LKEKIAALKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELRGN 60 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 45667777777777777777777777777777777777777777777776654
No 58
>2kz5_A Transcription factor NF-E2 45 kDa subunit; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=86.71 E-value=0.062 Score=45.24 Aligned_cols=24 Identities=29% Similarity=0.385 Sum_probs=20.7
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHH
Q 036551 351 ELKRQRRKQSNRESARRSRLRKQA 374 (453)
Q Consensus 351 ElKReRRKqsNRESARRSR~RKqa 374 (453)
..+.+||+-+||++|++||.||.+
T Consensus 64 lIrdiRRRgKNKvAAqnCRKRKld 87 (91)
T 2kz5_A 64 LVRDIRRRGKNKVAAQNYRKRKLE 87 (91)
T ss_dssp HHHHHHHHHHHHHHTTSCCCCCCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHH
Confidence 357789999999999999999853
No 59
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=86.28 E-value=0.86 Score=31.36 Aligned_cols=30 Identities=27% Similarity=0.413 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
++..|+.+|.+.++||-.|..++.+|..+|
T Consensus 2 evaqlekevaqaeaenyqleqevaqlehec 31 (33)
T 1fmh_A 2 EVAQLEKEVAQAEAENYQLEQEVAQLEHEC 31 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHhHHHHHHHHHHHhc
Confidence 356788888888899888888888877665
No 60
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=85.95 E-value=5.4 Score=29.75 Aligned_cols=50 Identities=12% Similarity=0.167 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 371 RKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 371 RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
+.+..+++++.++..++.+-..+..++..+.+.+...+.+...|+.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~~~k~qi~~ 58 (60)
T 3htk_A 9 TLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVIKKKNQNEY 58 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455566666666666666677777777777777777777777666654
No 61
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=85.71 E-value=0.92 Score=36.31 Aligned_cols=33 Identities=3% Similarity=0.123 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQ 406 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~ 406 (453)
+|+..|+.+++.|+.+...|+.++..|+.++..
T Consensus 47 ~YI~~L~~~~~~l~~e~~~L~~~~~~L~~~l~~ 79 (83)
T 1nkp_B 47 EYIQYMRRKNHTHQQDIDDLKRQNALLEQQVRA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466666666666666666666655555555443
No 62
>3a7o_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.50A {Saccharomyces cerevisiae}
Probab=85.40 E-value=3.8 Score=33.31 Aligned_cols=48 Identities=23% Similarity=0.225 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
+.+=+.++..|+....--.+..+.|..++-.|..||..|.++|..+..
T Consensus 27 L~~Ke~eI~~L~e~i~lk~kd~ErLNDEiislNIENNlL~~rl~~l~~ 74 (75)
T 3a7o_A 27 LKSKEQEIRRLKEVIALKNKNTERLNDELISGTIENNVLQQKLSDLKK 74 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHhhHHHHHhHHHHHHHHHHHHHHhc
Confidence 334444455555554444555667778888899999999999988753
No 63
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=85.27 E-value=3.3 Score=33.08 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQL 407 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L 407 (453)
..+.+|+...+.|..||..|+.+|..|..++..|
T Consensus 36 ~~v~~le~~~~~l~~en~~Lr~~i~~L~~El~~l 69 (70)
T 1gd2_E 36 TQVVTLKELHSSTTLENDQLRQKVRQLEEELRIL 69 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3456777777778888888888888887777654
No 64
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=85.26 E-value=12 Score=29.26 Aligned_cols=59 Identities=19% Similarity=0.183 Sum_probs=42.6
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 354 RQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLK 415 (453)
Q Consensus 354 ReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr 415 (453)
-+.-..+||+-|-.-=.. .+++|...+..-..+....+.+|..|+..++.|+.|...||
T Consensus 18 YE~ia~knr~EaE~~y~~---k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~slk 76 (77)
T 3trt_A 18 YESVAAKNLQEAEEWYKS---KFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDALK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHH---HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 344456777666543332 35678888887777778888889999988888988888776
No 65
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=84.56 E-value=1.5 Score=35.98 Aligned_cols=44 Identities=25% Similarity=0.399 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
++|-.+|++|..|+..|+.|+..+++-..+++..+.+|.++|..
T Consensus 33 ~DLI~rvdELt~E~e~l~~El~s~~~~~~r~~~ri~elEeElkr 76 (77)
T 2w83_C 33 NDLIAKVDELTCEKDVLQGELEAVKQAKLKLEEKNRELEEELRK 76 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---------
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56777888888888888888888888877777777777776653
No 66
>3s9g_A Protein hexim1; cyclin T-binding domain (TBD), cyclin T1/P-TEFB/7SK snRNA, N transcription; 2.10A {Homo sapiens} PDB: 2gd7_A
Probab=84.41 E-value=4 Score=34.99 Aligned_cols=31 Identities=32% Similarity=0.357 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee 403 (453)
-..+.+|+.+|+.|+.||+.|+.+....+++
T Consensus 64 ~~~v~eLe~everL~~ENq~L~~e~~~~~~~ 94 (104)
T 3s9g_A 64 DARVRELELELDRLRAENLQLLTENELHRQQ 94 (104)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4667888888888888888888777765543
No 67
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=84.38 E-value=1.2 Score=31.36 Aligned_cols=28 Identities=11% Similarity=0.239 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRN 402 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lke 402 (453)
++..||.+|++|-.+|..|..|+.+|++
T Consensus 2 RMnQledKvEel~~~~~~l~nEv~Rl~~ 29 (34)
T 2r2v_A 2 KLKQVADKLEEVASKLYHNANELARVAK 29 (34)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4678899999998888888888887665
No 68
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=84.24 E-value=1.6 Score=35.32 Aligned_cols=29 Identities=28% Similarity=0.290 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 372 KQAECDELAQRADALKEENASLRSEVTRI 400 (453)
Q Consensus 372 KqaelEeLE~rVe~Le~EN~~Lr~el~~L 400 (453)
|.+.+++|+.++.+++.++..|+.++..+
T Consensus 38 kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 38 RDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44456666666666666666666555543
No 69
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=84.23 E-value=5.2 Score=30.42 Aligned_cols=47 Identities=13% Similarity=0.218 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
+.+++|..+|..|..+...|..++..|+.+......|-..-.++|-.
T Consensus 4 aki~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak~eA~RAN~RlDN 50 (52)
T 1jcd_A 4 AKADQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRADN 50 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 35677888888888888888888888887777777776666666643
No 70
>1gu4_A CAAT/enhancer binding protein beta; transcription/DNA, protein-DNA complex, transcription factor, BZIP, C/EBP; 1.80A {Homo sapiens} SCOP: h.1.3.1 PDB: 1gtw_A 1gu5_A 1h88_A 1h8a_A 1io4_A 2e43_A* 2e42_A* 1h89_A 1ci6_B 1nwq_A
Probab=84.15 E-value=3.5 Score=33.57 Aligned_cols=56 Identities=25% Similarity=0.447 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 349 ERELKRQRRKQSNRESARRSR---LRKQAECDELAQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 349 ErElKReRRKqsNRESARRSR---~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
+--.||+|=-+.-|.|-.+.| .--+..+++|+.+-..|+.+...|..|+..|+.-+
T Consensus 15 ~Y~~rR~rNN~AakrSR~krk~r~~e~~~r~~~L~~eN~~L~~~v~~L~~E~~~Lr~ll 73 (78)
T 1gu4_A 15 EYKIRRERNNIAVRKSRDKAKMRNLETQHKVLELTAENERLQKKVEQLSRELSTLRNLF 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455554444444443333 44556789999999999999999999999987643
No 71
>3m9b_A Proteasome-associated ATPase; coil COIL with 5 beta-strand barrel inter domain, chaperone; 3.94A {Mycobacterium tuberculosis} PDB: 3m9d_A
Probab=83.58 E-value=0.79 Score=44.71 Aligned_cols=47 Identities=13% Similarity=0.193 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 036551 380 AQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQED 426 (453)
Q Consensus 380 E~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~~~ 426 (453)
+.++..|+.++..|..++..|.+.+..++.|+..|+++|..|..+..
T Consensus 53 ~~~l~eL~~ql~~L~arNe~L~~~Lk~ar~El~~LkeElerL~sPPL 99 (251)
T 3m9b_A 53 ARDIHQLEARIDSLAARNSKLMETLKEARQQLLALREEVDRLGQPPS 99 (251)
T ss_dssp CHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHSCCE
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 67899999999999999999999999999999999999999988654
No 72
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=83.26 E-value=19 Score=30.04 Aligned_cols=43 Identities=7% Similarity=0.203 Sum_probs=20.6
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 358 KQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRI 400 (453)
Q Consensus 358 KqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~L 400 (453)
.......+...+.++-+++..|..++..|+.+...+...+...
T Consensus 28 ~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea 70 (101)
T 3u1c_A 28 AEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKS 70 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444444445555555555555555555544444444333
No 73
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=83.16 E-value=3.4 Score=33.95 Aligned_cols=33 Identities=30% Similarity=0.374 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 388 EENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 388 ~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
.||..|..+|..+++++..|+.||..|++-+..
T Consensus 34 ~EN~~Lh~~ie~~~eEi~~LkeEN~~L~el~~~ 66 (79)
T 2zxx_A 34 KENEKLHKEIEQKDSEIARLRKENKDLAEVAEH 66 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567778888888888888888888777665543
No 74
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=83.00 E-value=5.2 Score=33.21 Aligned_cols=33 Identities=33% Similarity=0.376 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 387 KEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 387 e~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
-.||..|..+|..|++++..|+.+|..|+....
T Consensus 45 L~EN~~Lh~~ie~l~eEi~~lk~en~eL~elae 77 (83)
T 1uii_A 45 LKENEKLHKEIEQKDNEIARLKKENKELAEVAE 77 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 357888888888888888888888888876554
No 75
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=82.92 E-value=2.1 Score=34.58 Aligned_cols=22 Identities=27% Similarity=0.379 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHh
Q 036551 398 TRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 398 ~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
..|.++.+.|..||..|+.+|.
T Consensus 57 ~~l~~e~~~L~~e~~~L~~~L~ 78 (80)
T 1nlw_A 57 RKAVHQIDQLQREQRHLKRQLE 78 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 3333334444445555555554
No 76
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=82.91 E-value=0.6 Score=44.77 Aligned_cols=36 Identities=31% Similarity=0.375 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcCC
Q 036551 387 KEENASLRSEVTRIR---NEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 387 e~EN~~Lr~el~~Lk---ee~~~L~sEN~~Lr~qL~~L~ 422 (453)
.+||..|++|+..|+ .+++.|+.||.+||+.|....
T Consensus 25 ~~eN~~Lk~e~~~l~~~~~~~~~l~~En~rLr~lL~~~~ 63 (255)
T 2j5u_A 25 YTENQHLKERLEELAQLESEVADLKKENKDLKESLDITD 63 (255)
T ss_dssp -CTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 344444444444433 335678889999999887654
No 77
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=82.87 E-value=4.2 Score=33.32 Aligned_cols=34 Identities=21% Similarity=0.254 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 390 NASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 390 N~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
...|..+...|..+.+.|..+|..|+.+|..|.+
T Consensus 54 I~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L~~ 87 (88)
T 1nkp_A 54 ILSVQAEEQKLISEEDLLRKRREQLKHKLEQLGG 87 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4455555566666666677777778777776653
No 78
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=82.85 E-value=1.9 Score=31.74 Aligned_cols=24 Identities=33% Similarity=0.464 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEV 397 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el 397 (453)
....+||.+|..|+.||+.|++-+
T Consensus 17 ~~naeLEervstLq~EN~mLRqvl 40 (42)
T 2oqq_A 17 NKNSELEERLSTLQNENQMLRHIL 40 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHh
Confidence 345789999999999999988754
No 79
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=82.59 E-value=3.9 Score=33.95 Aligned_cols=30 Identities=33% Similarity=0.429 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 388 EENASLRSEVTRIRNEYEQLLAENASLKER 417 (453)
Q Consensus 388 ~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~q 417 (453)
.||..|..++..+++++..|+.||..|++-
T Consensus 38 ~EN~~Lh~~ie~~~eEi~~Lk~en~~L~el 67 (83)
T 1wlq_A 38 KENEKLHKEIEQKDSEIARLRKENKDLAEV 67 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666666666666666666666666654
No 80
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=82.13 E-value=3.4 Score=34.18 Aligned_cols=43 Identities=19% Similarity=0.342 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 380 AQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 380 E~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
..++...+..|..+.+++.....++..|..|...|+.++.+|+
T Consensus 30 ~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq 72 (81)
T 1wt6_A 30 SREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQ 72 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555666666666666666666667777777776666654
No 81
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=81.38 E-value=12 Score=31.20 Aligned_cols=8 Identities=13% Similarity=0.414 Sum_probs=2.9
Q ss_pred HHHHHHHH
Q 036551 381 QRADALKE 388 (453)
Q Consensus 381 ~rVe~Le~ 388 (453)
.+++.|+.
T Consensus 58 ~ei~~le~ 65 (84)
T 1gmj_A 58 KEIERLQK 65 (84)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 33333333
No 82
>1wt6_A Myotonin-protein kinase; coiled-coil, kinase activation, DMPK, molecular replacement, transferase; 1.60A {Homo sapiens}
Probab=81.25 E-value=9.1 Score=31.64 Aligned_cols=52 Identities=21% Similarity=0.269 Sum_probs=37.9
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 359 QSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAE 410 (453)
Q Consensus 359 qsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sE 410 (453)
++.+.+-++-=.+=+.....++.++.+.+..|..|..++..|+++...|+.+
T Consensus 23 IqAKQ~i~EELs~vr~~ni~~eskL~eae~rn~eL~~e~~~l~~~~eelq~~ 74 (81)
T 1wt6_A 23 VLTRQSLSREMEAIRTDNQNFASQLREAEARNRDLEAHVRQLQERMELLQAE 74 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3444444444445556667788899999999999999999999888877654
No 83
>3u1c_A Tropomyosin alpha-1 chain; anti-parallel coiled coil, contractIle protein; 1.80A {Gallus gallus} PDB: 3u1a_A
Probab=81.13 E-value=23 Score=29.53 Aligned_cols=48 Identities=15% Similarity=0.255 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 370 LRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKER 417 (453)
Q Consensus 370 ~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~q 417 (453)
..-+..+..++.+...++.+...|..+++.|..+++.+.......+.+
T Consensus 26 e~~e~~~k~~e~~~~~~E~Ei~sL~kk~~~lE~eld~~ee~L~ea~~k 73 (101)
T 3u1c_A 26 EQAEADKKAAEERSKQLEDDIVQLEKQLRVTEDSRDQVLEELHKSEDS 73 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333344444444445555555555555555544444444444433333
No 84
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=80.73 E-value=4.9 Score=45.86 Aligned_cols=28 Identities=29% Similarity=0.297 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 383 ADALKEENASLRSEVTRIRNEYEQLLAE 410 (453)
Q Consensus 383 Ve~Le~EN~~Lr~el~~Lkee~~~L~sE 410 (453)
+..|+.|+..|+++++.+.++.+.|+.+
T Consensus 986 v~~L~~e~~~l~~~~~~~~ke~~~lee~ 1013 (1080)
T 2dfs_A 986 VLSLQEEIAKLRKELHQTQTEKKTIEEW 1013 (1080)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333333333333
No 85
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=80.39 E-value=7 Score=30.33 Aligned_cols=19 Identities=32% Similarity=0.433 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRS 395 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~ 395 (453)
++|+.+-..|..+...|+.
T Consensus 40 ~~L~~eN~~L~~ev~~Lr~ 58 (63)
T 2dgc_A 40 EELLSKNYHLENEVARLKK 58 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444433
No 86
>1t2k_D Cyclic-AMP-dependent transcription factor ATF-2; protein DNA complex, transcription/DNA complex; 3.00A {Homo sapiens} SCOP: h.1.3.1
Probab=80.12 E-value=16 Score=27.65 Aligned_cols=39 Identities=26% Similarity=0.224 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 381 QRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 381 ~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
..++.|+.+...|..++..|..++..|+.|+..|+..|.
T Consensus 22 ~~~~~Le~~~~~L~~~n~~L~~~i~~L~~e~~~Lk~~ll 60 (61)
T 1t2k_D 22 VWVQSLEKKAEDLSSLNGQLQSEVTLLRNEVAQLKQLLL 60 (61)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 457888888888999999999999999999998888774
No 87
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=79.93 E-value=19 Score=31.35 Aligned_cols=47 Identities=19% Similarity=0.164 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 369 RLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLK 415 (453)
Q Consensus 369 R~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr 415 (453)
...-+.++.+|+.+|..|+.|...-+...+....+++.|+.|+..|+
T Consensus 35 ~~E~q~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~l~ 81 (120)
T 3i00_A 35 KTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELR 81 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667788888888888888888877777776666666666666553
No 88
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=79.69 E-value=2.4 Score=45.33 Aligned_cols=61 Identities=11% Similarity=0.141 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhcCCCcccccccc
Q 036551 371 RKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKE----RLGEIPVQEDERSVR 431 (453)
Q Consensus 371 RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~----qL~~L~g~~~is~~r 431 (453)
.+.++.++|+++++.|+.+.+.-...|..|+.-++.++.+...|.. +|....+.+...+.+
T Consensus 107 tynE~S~ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDIdiqirsCKgsCsr~~~~ 171 (562)
T 3ghg_A 107 TYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRGSCSRALAR 171 (562)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTBSCCCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhee
Confidence 4445556788888888877777667777777777777777776653 444455555544433
No 89
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=79.61 E-value=19 Score=33.28 Aligned_cols=51 Identities=24% Similarity=0.249 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 367 RSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 367 RSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
--|+||++ .||...+..++..+..|+..+..|......|..|+..|...|.
T Consensus 29 ~~rlkK~~--tEl~k~~~~~E~~~rELq~~~~~L~~~k~~Leke~~~LQa~L~ 79 (168)
T 3o0z_A 29 AVRLRKSH--TEMSKSISQLESLNRELQERNRILENSKSQTDKDYYQLQAILE 79 (168)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455554 4555555555555555555555555555555555555544443
No 90
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=79.60 E-value=8.8 Score=33.76 Aligned_cols=46 Identities=15% Similarity=0.200 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
+.|+.+...-..+.++|..||..|+++++.+.+|...||.....+.
T Consensus 60 ~SL~~ekaq~q~~vqeLqgEI~~Lnq~Lq~a~ae~erlr~~~~~~~ 105 (121)
T 3mq7_A 60 ASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLS 105 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhh
Confidence 4455555554556788888888888888888888888887776543
No 91
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=79.26 E-value=10 Score=38.15 Aligned_cols=28 Identities=14% Similarity=0.142 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 388 EENASLRSEVTRIRNEYEQLLAENASLK 415 (453)
Q Consensus 388 ~EN~~Lr~el~~Lkee~~~L~sEN~~Lr 415 (453)
++....+.+++.|+++.+.++.++.+|.
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (487)
T 3oja_A 435 RDWDMYQHKETQLAEENARLKKLNGEAD 462 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHhhhhhhhhhhhh
Confidence 3333333333333333333333333333
No 92
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=79.24 E-value=3.7 Score=33.65 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQL 407 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L 407 (453)
+|+..|+.+...|..+...|+.+...|+.++..|
T Consensus 52 ~YI~~L~~~~~~l~~~~~~L~~~n~~L~~rl~~L 85 (88)
T 1nkp_A 52 AYILSVQAEEQKLISEEDLLRKRREQLKHKLEQL 85 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555555555555555555555544444444433
No 93
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=78.70 E-value=23 Score=28.20 Aligned_cols=46 Identities=17% Similarity=0.303 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
..+++.+.+...++.+...|..++..|..+++.+.........+|.
T Consensus 27 ~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l~~a~~kLe 72 (81)
T 1ic2_A 27 ADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESLKDAQEKLE 72 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444445555555555555555555544444444444443
No 94
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=78.69 E-value=8.3 Score=31.21 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 371 RKQAECDELAQRADALKEENASLRSEVTRIRNEYEQL 407 (453)
Q Consensus 371 RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L 407 (453)
+|.+++...+.+++.|+.+.+.+..+|..|+.++.++
T Consensus 30 ~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLDKf 66 (72)
T 3nmd_A 30 EKIEELRQRDALIDELELELDQKDELIQMLQNELDKY 66 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3445566667777777777777776666666666555
No 95
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=78.36 E-value=18 Score=36.22 Aligned_cols=36 Identities=17% Similarity=0.214 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNEYEQLLAENAS 413 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~ 413 (453)
.|+.+|.+-++..++|..||..|..+++.+++|..+
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (471)
T 3mq9_A 433 SLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVER 468 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444333333333333333333333333333333
No 96
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=78.29 E-value=6.7 Score=32.72 Aligned_cols=46 Identities=17% Similarity=0.303 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
..+++.|+.+...|..+-..+..+...++.+...+..|..+|..++
T Consensus 38 ~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE~~Sl~~q~ 83 (96)
T 3q8t_A 38 AENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQM 83 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444444444444444444444443
No 97
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=77.95 E-value=17 Score=34.30 Aligned_cols=29 Identities=24% Similarity=0.324 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
++.|..+++.++.++..|..++..+.++.
T Consensus 92 ~~aL~kEie~~~~~i~~lE~eile~~e~i 120 (256)
T 3na7_A 92 LRSLNIEEDIAKERSNQANREIENLQNEI 120 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444443333333
No 98
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=77.95 E-value=7.4 Score=33.10 Aligned_cols=21 Identities=33% Similarity=0.298 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 036551 400 IRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 400 Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
-+.+.+.++..|..|+++|.+
T Consensus 74 ar~e~~~~e~kn~~L~~qL~d 94 (97)
T 2eqb_B 74 ARKEKYAIEILNKRLTEQLRE 94 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhh
Confidence 356778888999999999875
No 99
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=77.81 E-value=19 Score=29.52 Aligned_cols=53 Identities=28% Similarity=0.334 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 370 LRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 370 ~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
...+++++.|.+--++|..=-+.|..-+..|.++...|......|+.+..+|.
T Consensus 21 ~q~qaEl~sLrrT~~EL~~G~~KL~~mi~~l~~E~~~l~~ni~~lk~K~~EL~ 73 (78)
T 3iv1_A 21 DRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELS 73 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888877888888888888888888888888888888888777664
No 100
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=77.74 E-value=14 Score=32.05 Aligned_cols=49 Identities=10% Similarity=0.114 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
+..|+.++..|...|..|...|..|.+.++.|+...+..-.-|.++..+
T Consensus 37 ~~~Lq~El~~lr~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k 85 (111)
T 2v66_B 37 VSVLEDDLSQTRAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQR 85 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHH
Confidence 4456666666666666666666666666666666655555555544433
No 101
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=77.45 E-value=2.2 Score=32.50 Aligned_cols=30 Identities=7% Similarity=0.178 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee 403 (453)
+.|+++...++.|..||..|+.++..|+++
T Consensus 27 ~FLd~v~~~~~~l~~e~~~L~~~~~~l~~~ 56 (57)
T 2wuj_A 27 EFLAQVRKDYEIVLRKKTELEAKVNELDER 56 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345556666666666666666666555443
No 102
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=77.25 E-value=20 Score=35.92 Aligned_cols=43 Identities=19% Similarity=0.102 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 369 RLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAEN 411 (453)
Q Consensus 369 R~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN 411 (453)
|.|.+++++....+++.|+.||+.|+.++..+..++.+.....
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (487)
T 3oja_A 430 QNNAIRDWDMYQHKETQLAEENARLKKLNGEADLALASANATL 472 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcchhhhhhhhhHHHHHHHHhhhhhhhhhhhhhhhHhcccHH
Confidence 3344455555555555555566555555555554444443333
No 103
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=77.20 E-value=7.2 Score=30.09 Aligned_cols=30 Identities=37% Similarity=0.654 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee 403 (453)
.++++|+.+...|+.+...|..|+..|++-
T Consensus 30 ~~~~~L~~~N~~L~~~i~~L~~E~~~Lk~l 59 (63)
T 1ci6_A 30 GECKELEKKNEALKERADSLAKEIQYLKDL 59 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777777777777776554
No 104
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=77.19 E-value=3.2 Score=39.84 Aligned_cols=59 Identities=15% Similarity=0.076 Sum_probs=25.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 352 LKRQRRKQSNRESARRSRLRKQ-------AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAE 410 (453)
Q Consensus 352 lKReRRKqsNRESARRSR~RKq-------aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sE 410 (453)
.||.+|.++-=.==-+.|+-+. ++.+++..+++.|..||+.|..+|+.|+.+..+.++|
T Consensus 119 ~~Rt~~iLSalINF~~FRE~~~~~~~e~~~~~e~~~~~i~ql~~En~~le~~Ie~Lk~e~~e~~te 184 (250)
T 2ve7_C 119 AKRTSRFLSGIINFIHFREACRETYMEFLWQYKSSADKMQQLNAAHQEALMKLERLEKEVDEDTTV 184 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHSCC------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 4677777554333344444444 4445555555566666666666666655555544443
No 105
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=77.19 E-value=4.9 Score=32.61 Aligned_cols=48 Identities=23% Similarity=0.379 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHhc
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRI------RNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~L------kee~~~L~sEN~~Lr~qL~~ 420 (453)
|.+++.|+.+++.|+.+...|..++..- -.++..|..+...|..+|..
T Consensus 21 qrEle~le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~ 74 (89)
T 2lw1_A 21 QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQ 74 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 4467888888888888888887776421 23444555555555555544
No 106
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=77.07 E-value=1.4 Score=36.05 Aligned_cols=29 Identities=24% Similarity=0.260 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 390 NASLRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 390 N~~Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
...|+++|..|.+++.+|+.||..||...
T Consensus 17 VevLKe~I~EL~e~~~qLE~EN~~Lk~~a 45 (78)
T 1dip_A 17 VEILKEQIRELVEKNSQLERENTLLKTLA 45 (78)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34566666667777777888888888654
No 107
>3efg_A Protein SLYX homolog; xanthomonas campestris PV. campestris, coiled-coil, structur genomics, PSI-2, protein structure initiative; 2.00A {Xanthomonas campestris PV}
Probab=77.07 E-value=4.2 Score=32.93 Aligned_cols=48 Identities=15% Similarity=0.109 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
++|+.|+..|+.....+..-|+.|.+...+...+...|+.+|..|..+
T Consensus 10 ~~le~Ri~~LE~klAfqE~tIeeLn~~v~~Qq~~Id~L~~ql~~L~~r 57 (78)
T 3efg_A 10 QELEARLVELETRLSFQEQALTELSEALADARLTGARNAELIRHLLED 57 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667777777777777777777777777777777777776666554
No 108
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=76.80 E-value=5.7 Score=37.83 Aligned_cols=25 Identities=20% Similarity=0.320 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIR 401 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lk 401 (453)
+.|..+|+.|+.|+..|+.++..|+
T Consensus 118 ~~Lh~~ie~l~eEi~~LkeEn~eLk 142 (209)
T 2wvr_A 118 EKLHKEIEQKDNEIARLKKENKELA 142 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444455555555555555444443
No 109
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=76.33 E-value=1.6 Score=29.04 Aligned_cols=26 Identities=27% Similarity=0.431 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 383 ADALKEENASLRSEVTRIRNEYEQLL 408 (453)
Q Consensus 383 Ve~Le~EN~~Lr~el~~Lkee~~~L~ 408 (453)
++.|+.||..|..++..|++++..|.
T Consensus 2 idalefendaleqkiaalkqkiaslk 27 (28)
T 3ra3_A 2 IDALEFENDALEQKIAALKQKIASLK 27 (28)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cchHHhccHHHHHHHHHHHHHHHHhc
Confidence 34678888888888888877776653
No 110
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=76.28 E-value=3.8 Score=38.51 Aligned_cols=15 Identities=13% Similarity=0.197 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHHHH
Q 036551 385 ALKEENASLRSEVTR 399 (453)
Q Consensus 385 ~Le~EN~~Lr~el~~ 399 (453)
....|+..|+.+++.
T Consensus 38 ~k~~ei~~L~~ql~s 52 (190)
T 4emc_A 38 TKATEIKQLQKQIDS 52 (190)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 111
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=76.22 E-value=11 Score=30.09 Aligned_cols=44 Identities=16% Similarity=0.233 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
.++.++.++...+..+..+..++..|+.++..|+.+...+.++|
T Consensus 21 ~~~~~e~~l~~~e~~~~~~E~ev~~L~kKiq~lE~eld~~ee~l 64 (81)
T 1ic2_A 21 RAEQAEADKKAAEERSKQLEDELVALQKKLKGTEDELDKYSESL 64 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444444444444444444444444443
No 112
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=76.19 E-value=4 Score=28.80 Aligned_cols=13 Identities=31% Similarity=0.419 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHh
Q 036551 407 LLAENASLKERLG 419 (453)
Q Consensus 407 L~sEN~~Lr~qL~ 419 (453)
|+.+|..|.+++.
T Consensus 19 lkrQN~~Le~Qir 31 (34)
T 1a93_B 19 LKRQNALLEQQVR 31 (34)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344444444443
No 113
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=75.51 E-value=27 Score=30.06 Aligned_cols=44 Identities=11% Similarity=0.222 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
+|+.++..|+.........+..|..+..+|..+...|+.+|..+
T Consensus 80 eLe~~l~el~~rleeeee~~~~L~~~kkkle~e~~~Lk~~led~ 123 (129)
T 2fxo_A 80 QLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKRDIDDL 123 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444444444444444555555555555443
No 114
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=75.34 E-value=23 Score=30.77 Aligned_cols=47 Identities=17% Similarity=0.223 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
.+.-|+++++.++..-..=+..-+.+.++.+.|..++..|+.++..|
T Consensus 63 ~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq~q~~~l 109 (110)
T 2v4h_A 63 TVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFNKL 109 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHHHHHHhc
Confidence 44445555555554444444444555566666666666666665544
No 115
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=74.95 E-value=8.5 Score=30.91 Aligned_cols=64 Identities=17% Similarity=0.198 Sum_probs=32.9
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 357 RKQSNRESARRSRLRKQAECDELAQRADAL---KEENASL---RSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 357 RKqsNRESARRSR~RKqaelEeLE~rVe~L---e~EN~~L---r~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
|+...-.+-|+-|.+=...+.+|..-|-.. ...-.-| -.-|..|+.+.+.|..||..|+..+..
T Consensus 6 rr~~H~~~ErrRR~~in~~f~~L~~lvP~~~~k~~Ka~IL~~Ai~YI~~Lq~~~~~L~~e~~~L~~~~~~ 75 (82)
T 1am9_A 6 KRTAHNAIEKRYRSSINDKIIELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLRTAVHK 75 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444444555666665566666666544321 0011111 122445666666666667666666554
No 116
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=74.91 E-value=4.2 Score=32.70 Aligned_cols=27 Identities=33% Similarity=0.348 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLRSEVTR 399 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~ 399 (453)
-+|+.+|+.+++.|+.++..|+.+++.
T Consensus 49 i~YI~~Lq~~~~~L~~e~~~L~~~~~~ 75 (82)
T 1am9_A 49 IDYIRFLQHSNQKLKQENLSLRTAVHK 75 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 367788888888888877777777665
No 117
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=74.40 E-value=4 Score=41.92 Aligned_cols=46 Identities=20% Similarity=0.222 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
+|..+++.|+.+...|..+...|+.+...+..|...|++++..++.
T Consensus 46 dl~~~lk~le~~~~~L~~e~e~l~~~~~~~~~e~~~~~ee~~~l~~ 91 (428)
T 4b4t_K 46 DIYFKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQS 91 (428)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3334444444444444444444444444444444455555544443
No 118
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=73.84 E-value=7.7 Score=31.27 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQL 407 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L 407 (453)
.+|+..|+.+...|..|+..|+.++..|+.++++|
T Consensus 46 ~~yI~~L~~~~~~l~~e~~~L~~e~~~L~~~L~~l 80 (80)
T 1nlw_A 46 KLHIKKLEDSDRKAVHQIDQLQREQRHLKRQLEKL 80 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 47888888888888888888888888877776543
No 119
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=73.83 E-value=7.5 Score=26.72 Aligned_cols=23 Identities=39% Similarity=0.495 Sum_probs=9.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 036551 378 ELAQRADALKEENASLRSEVTRI 400 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~L 400 (453)
.|.+++..|+.|...|+-|+..|
T Consensus 6 alkqeiaalkkeiaalkfeiaal 28 (33)
T 4dzn_A 6 ALKQEIAALKKEIAALKFEIAAL 28 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444444333
No 120
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=73.68 E-value=10 Score=37.99 Aligned_cols=48 Identities=10% Similarity=-0.024 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
++..||..|...+.+...|+..+..++.++++|..+...|+.++....
T Consensus 13 ~~~~~e~~i~~~~~~i~~L~~~l~~~~~~i~~l~~~i~~l~~~~~~~~ 60 (323)
T 1lwu_C 13 EVRILEQIGVSHDAQIQELSEMWRVNQQFVTRLQQQLVDIRQTCSRPC 60 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 445555566666666666666666666666666666666666665443
No 121
>3o0z_A RHO-associated protein kinase 1; coiled-coil, transferase; HET: MSE; 2.33A {Homo sapiens}
Probab=73.00 E-value=32 Score=31.71 Aligned_cols=59 Identities=24% Similarity=0.336 Sum_probs=30.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 357 RKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 357 RKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
.++.-=+.=|+.|.+-.+.+.+|+.++..|+. ++..++....++..||..|.++|..+.
T Consensus 73 ~LQa~L~qEr~~r~q~se~~~elq~ri~~L~~-------El~~~k~~~~k~~~e~r~L~Ekl~~lE 131 (168)
T 3o0z_A 73 QLQAILEAERRDRGHDSEMIGDLQARITSLQE-------EVKHLKHNLEKVEGERKEAQDMLNHSE 131 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555555555555555555554444 444444445555555555555555443
No 122
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=72.93 E-value=37 Score=27.65 Aligned_cols=52 Identities=19% Similarity=0.346 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 371 RKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 371 RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
+-.....+|+.+...|..+...|..++..+.+.|..|......|..+|..+.
T Consensus 32 k~e~~rkele~~~~~l~~ek~~L~~ql~eaEe~~~~L~~~K~eLE~~l~el~ 83 (89)
T 3bas_A 32 KTERIKKELEEQNVTLLEQKNDLFGSMKQLEDKVEELLSKNYHLENEVARLK 83 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344456788888888888888888888888888888888888888887663
No 123
>1a93_B MAX protein, coiled coil, LZ; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Mus musculus} SCOP: h.1.3.1 PDB: 2a93_B
Probab=72.93 E-value=5 Score=28.35 Aligned_cols=27 Identities=7% Similarity=0.250 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 387 KEENASLRSEVTRIRNEYEQLLAENAS 413 (453)
Q Consensus 387 e~EN~~Lr~el~~Lkee~~~L~sEN~~ 413 (453)
..+|+..+++|..|+.++..|+.|.+.
T Consensus 6 RrKn~a~qqDIddlkrQN~~Le~Qir~ 32 (34)
T 1a93_B 6 RRKNDTHQQDIDDLKRQNALLEQQVRA 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhHhhHHHHHHHHHHHHHHHHh
Confidence 344555555555555555555555443
No 124
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=72.80 E-value=35 Score=27.93 Aligned_cols=47 Identities=13% Similarity=0.249 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
+-+|..+++.|+.|...|+-+++.+.-+++.|....+.+-..|....
T Consensus 22 ~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dLD~Rl 68 (83)
T 2xdj_A 22 LTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS 68 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677777777777777777777777777777777777766665443
No 125
>3htk_A Structural maintenance of chromosomes protein 5; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=72.68 E-value=15 Score=27.32 Aligned_cols=43 Identities=9% Similarity=0.271 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
..|+..+..++.+...+..++..++.++.++..+....+..|.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~l~~~~~~I~ 50 (60)
T 3htk_A 8 KTLENQVEELTEKCSLKTDEFLKAKEKINEIFEKLNTIRDEVI 50 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444444444444444444444433
No 126
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=72.31 E-value=2.2 Score=34.93 Aligned_cols=27 Identities=30% Similarity=0.407 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIR 401 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lk 401 (453)
++|.|..++.+|+..|..|..|+..|+
T Consensus 16 EVevLKe~I~EL~e~~~qLE~EN~~Lk 42 (78)
T 1dip_A 16 EVEILKEQIRELVEKNSQLERENTLLK 42 (78)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555555555555544
No 127
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=71.92 E-value=41 Score=27.76 Aligned_cols=32 Identities=22% Similarity=0.393 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
..++++|..+|+.+..++..|..++..|..+.
T Consensus 55 e~~i~~Lr~~i~~~~~ek~~l~~e~dnl~~~~ 86 (93)
T 3s4r_A 55 EEEMRELRRQVDQLTNDKARVEVERDNLAEDI 86 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35566666666666666666655555544433
No 128
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=71.64 E-value=42 Score=27.73 Aligned_cols=62 Identities=18% Similarity=0.218 Sum_probs=27.4
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHhc
Q 036551 359 QSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRN-------EYEQLLAENASLKERLGE 420 (453)
Q Consensus 359 qsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lke-------e~~~L~sEN~~Lr~qL~~ 420 (453)
......+...+.++-.++..|..++..|+.+...+...+..+.. .....+.++..|..+|..
T Consensus 29 e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kLe~~ek~~~~AE~evasLnRriql 97 (101)
T 3u59_A 29 EADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKLEQAEKKATDAEAEVASLNRRIQL 97 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444445555555555555554444443333333322 222333455555555543
No 129
>2v4h_A NF-kappa-B essential modulator; transcription, metal-binding, NEMO - IKK gamma - NFKB pathwa darpin, transcription regulation; 2.9A {Mus musculus}
Probab=71.62 E-value=50 Score=28.65 Aligned_cols=63 Identities=22% Similarity=0.295 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhcCCC
Q 036551 361 NRESARRSRLRKQAECDELAQRADALKE---ENASLRSEVTRI-------RNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 361 NRESARRSR~RKqaelEeLE~rVe~Le~---EN~~Lr~el~~L-------kee~~~L~sEN~~Lr~qL~~L~g 423 (453)
|-.+|-..=..|+..|++|++++..++. ....|+.++... +..-+++..|...|.++|..|..
T Consensus 32 ~L~~AEeaL~~Kq~~idelk~ei~q~~~~lE~I~vLkaQv~IY~~DF~aERadREkl~~eKe~L~~ql~~Lq~ 104 (110)
T 2v4h_A 32 QLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQR 104 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhhHHHHHhHHHHHHHHHHHHHH
Confidence 3444455555566666666666666555 444555555444 45556788888888888876653
No 130
>3a7p_A Autophagy protein 16; coiled-coil, coiled coil, cytoplasmic vesicle, protein transport, transport, vacuole; 2.80A {Saccharomyces cerevisiae}
Probab=71.54 E-value=21 Score=32.56 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLA 409 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~s 409 (453)
-++.|..++..|+.++..|..++..|++++..|..
T Consensus 97 ~~e~l~DEl~aLqlq~n~lE~kl~kLq~EN~~LV~ 131 (152)
T 3a7p_A 97 NTERLNAALISGTIENNVLQQKLSDLKKEHSQLVA 131 (152)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666666666666666666666666655543
No 131
>1go4_E MAD1 (mitotic arrest deficient)-like 1; mitotic spindle checkpoint, cell cycle, mitosis, nuclear Pro; 2.05A {Homo sapiens} SCOP: h.1.22.1
Probab=70.94 E-value=8.7 Score=32.75 Aligned_cols=25 Identities=28% Similarity=0.399 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTR 399 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~ 399 (453)
.+..|..+++.|+.||..|+.++..
T Consensus 13 ~~~~lr~ei~~Le~E~~rLr~~~~~ 37 (100)
T 1go4_E 13 EADTLRLKVEELEGERSRLEEEKRM 37 (100)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555444444333
No 132
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=70.73 E-value=23 Score=30.45 Aligned_cols=42 Identities=17% Similarity=0.152 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
-..|.+++.|+.++.+|+.++.....-...|-.+|..|+..+
T Consensus 14 ~~~e~e~~~l~~~~~el~~~l~~~~~~~~e~g~~~~~lq~~~ 55 (125)
T 1joc_A 14 LKGEGEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKH 55 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccc
Confidence 334445556666666666666555555555555666665444
No 133
>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B
Probab=70.46 E-value=8.5 Score=26.46 Aligned_cols=26 Identities=35% Similarity=0.500 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 391 ASLRSEVTRIRNEYEQLLAENASLKE 416 (453)
Q Consensus 391 ~~Lr~el~~Lkee~~~L~sEN~~Lr~ 416 (453)
..|+.|+..|+.++..|.-|...|++
T Consensus 5 aalkqeiaalkkeiaalkfeiaalkq 30 (33)
T 4dzn_A 5 AALKQEIAALKKEIAALKFEIAALKQ 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44455555555555555555555554
No 134
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=70.05 E-value=17 Score=27.07 Aligned_cols=28 Identities=21% Similarity=0.334 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 384 DALKEENASLRSEVTRIRNEYEQLLAEN 411 (453)
Q Consensus 384 e~Le~EN~~Lr~el~~Lkee~~~L~sEN 411 (453)
-+|+...+.|.+-+..|+.++..|+.|.
T Consensus 20 lqlerdeqnlekiianlrdeiarlenev 47 (52)
T 3he5_B 20 LQLERDEQNLEKIIANLRDEIARLENEV 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhHhhHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555555555555555443
No 135
>3q8t_A Beclin-1; autophagy, ATG14L uvrag, apoptosis; 1.90A {Rattus norvegicus}
Probab=69.60 E-value=47 Score=27.54 Aligned_cols=70 Identities=14% Similarity=0.239 Sum_probs=47.0
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 352 LKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 352 lKReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
........++|+....-....+.+++.|..+=..+-.+-+.++.++..+..+...|.++..--..+|..|
T Consensus 24 ~~eL~~lEke~~~l~~el~~le~E~~~L~~eE~~~w~eyn~~~~ql~e~~dE~~Sl~~q~~~~~~qLdkL 93 (96)
T 3q8t_A 24 IQELEDVEKNRKVVAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQMRYAQMQLDKL 93 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455566777777777777777777777776666666666666666666777666666666655555544
No 136
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=69.14 E-value=10 Score=27.97 Aligned_cols=24 Identities=25% Similarity=0.371 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 397 VTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 397 l~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
+..|..+++.|+.....|+.+|..
T Consensus 22 laaleselqalekklaalksklqa 45 (48)
T 1g6u_A 22 LAALESELQALEKKLAALKSKLQA 45 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444555555443
No 137
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=68.95 E-value=16 Score=29.30 Aligned_cols=50 Identities=10% Similarity=-0.009 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 370 LRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 370 ~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
...+..+..|+.++..++.+-+....+.+.|-.-...|..|....|.-|.
T Consensus 8 ~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYRkLLE 57 (74)
T 2xv5_A 8 DTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLE 57 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33444444555555555444444444444444444455555555554443
No 138
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=68.38 E-value=9.9 Score=32.68 Aligned_cols=50 Identities=20% Similarity=0.232 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
+++-|..++++++.....|+.++.....+++.+.-....|+.++..+..+
T Consensus 31 qVdlLKD~LEe~eE~~aql~Re~~eK~re~e~~Kr~~~~L~~~~~~lk~~ 80 (103)
T 4h22_A 31 QVDTLKDMLLELEEQLAESRRQYEEKNKEFEREKHAHSILQFQFAEVKEA 80 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999999999999999999999999999999999998887653
No 139
>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A
Probab=68.33 E-value=40 Score=27.55 Aligned_cols=43 Identities=12% Similarity=0.153 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 369 RLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAEN 411 (453)
Q Consensus 369 R~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN 411 (453)
=..=+..+++|+.+|..|+-.+..+..++..|+++-..+-.+.
T Consensus 22 ~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dL 64 (83)
T 2xdj_A 22 LTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQI 64 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566667777777777777777777666666655555544
No 140
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=68.21 E-value=11 Score=35.09 Aligned_cols=37 Identities=11% Similarity=0.116 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAE 410 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sE 410 (453)
+.++.|=..+..|+.+|..|.+++++|+.+.++...+
T Consensus 145 elid~~ld~~~~L~~~n~~LqkeNeRL~~E~n~~l~q 181 (184)
T 3w03_C 145 ELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQGR 181 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666666666666666666666665554443
No 141
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=68.14 E-value=13 Score=27.72 Aligned_cols=41 Identities=22% Similarity=0.324 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 379 LAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 379 LE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
|..++..|+..|-.|...-+.|..-+..|+.|...|..++.
T Consensus 8 lrkkiarlkkdnlqlerdeqnlekiianlrdeiarleneva 48 (52)
T 3he5_B 8 LRKKIARLKKDNLQLERDEQNLEKIIANLRDEIARLENEVA 48 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHhhhhhhhhhhHhhHHHHHHHHHHHHHHHHHHHh
Confidence 44455666666666666666666666666666666655554
No 142
>2ve7_C Kinetochore protein NUF2, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_D*
Probab=68.10 E-value=1.7 Score=41.71 Aligned_cols=46 Identities=15% Similarity=0.037 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
++.|+.+.+.++++.+.|+.++.+...+.........+|...+..+
T Consensus 157 i~ql~~En~~le~~Ie~Lk~e~~e~~te~~p~~k~~~qly~~vt~i 202 (250)
T 2ve7_C 157 MQQLNAAHQEALMKLERLEKEVDEDTTVTIPSAVYVAQLYHQVSKI 202 (250)
T ss_dssp HHHHHHHHHHHHHSCC-------------CTTTHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHhhc
Confidence 3344444444444444444444433333333334444444444444
No 143
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=67.95 E-value=24 Score=29.20 Aligned_cols=44 Identities=18% Similarity=0.247 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
++|+.+-.+.+.....-+.+|..|+++++.-.+|.+.|+.+|..
T Consensus 36 ~elEnErlQyEkKLKsTK~El~~Lq~qLe~kd~ei~rL~~~l~~ 79 (81)
T 3qh9_A 36 EELENERNQYEWKLKATKAEVAQLQEQVALKDAEIERLHSQLSR 79 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhHHHHHHHHHHHhh
Confidence 34444444444444445566777777777777777777777653
No 144
>3cve_A Homer protein homolog 1; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse; 1.75A {Rattus norvegicus}
Probab=67.91 E-value=23 Score=28.54 Aligned_cols=49 Identities=18% Similarity=0.359 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
+..+..|+.+++.-+.+-..++.++..+.+.+..-..|...|++.|..|
T Consensus 20 e~~v~~le~~Le~s~~~q~~~~~Elk~~~e~Ld~KI~eL~elrq~LakL 68 (72)
T 3cve_A 20 EGQLSEMEQRLEKSQSEQDAFRSNLKTLLEILDGKIFELTELRDNLAKL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 3455666666666666667777777777777777777777787777664
No 145
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=67.75 E-value=6.9 Score=26.58 Aligned_cols=23 Identities=26% Similarity=0.443 Sum_probs=11.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 036551 378 ELAQRADALKEENASLRSEVTRI 400 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~L 400 (453)
.|..-+..|++||..|+.+++.|
T Consensus 3 qlnallasleaenkqlkakveel 25 (31)
T 1p9i_A 3 QLNALLASLEAENKQLKAKVEEL 25 (31)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555555555555554443
No 146
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=67.60 E-value=15 Score=31.48 Aligned_cols=72 Identities=25% Similarity=0.305 Sum_probs=23.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-------------HHH---HHHHHHHHHHHHHHHH---HHHHHHHHHH
Q 036551 353 KRQRRKQSNRESARRSRLRKQAECDELAQRAD-------------ALK---EENASLRSEVTRIRNE---YEQLLAENAS 413 (453)
Q Consensus 353 KReRRKqsNRESARRSR~RKqaelEeLE~rVe-------------~Le---~EN~~Lr~el~~Lkee---~~~L~sEN~~ 413 (453)
|+..|+...-.+-|+-|.+=...+.+|..-|- .|. .-...|+.+++.|+++ ...|+.+|..
T Consensus 23 k~~~kr~~Hn~~ERrRR~~In~~~~~L~~lvP~~~~~~~k~~Ka~IL~~aieYIk~Lq~~~~~l~~~~~~~~~l~~~n~~ 102 (118)
T 4ati_A 23 KERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRAKDLENRQKKLEHANRH 102 (118)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHSCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-----------
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555556667767666666777665433 222 1233455555555433 5567888888
Q ss_pred HHHHHhcCCCc
Q 036551 414 LKERLGEIPVQ 424 (453)
Q Consensus 414 Lr~qL~~L~g~ 424 (453)
|..+|.+|.-+
T Consensus 103 L~~riqeLE~~ 113 (118)
T 4ati_A 103 LLLRVQELEMQ 113 (118)
T ss_dssp -----------
T ss_pred HHHHHHHHHHH
Confidence 88888877643
No 147
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=67.42 E-value=14 Score=26.41 Aligned_cols=30 Identities=17% Similarity=0.165 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 391 ASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 391 ~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
+.|-.++....++...|+.+|..|..+|..
T Consensus 9 q~LNdrlAsyidkVR~LE~~N~~Le~~i~~ 38 (39)
T 1gk7_A 9 QELNDRFANYIDKVRFLEQQNKILLAELEQ 38 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444444555666677777777777754
No 148
>2fxo_A Myosin heavy chain, cardiac muscle beta isoform; coiled coil (dimeric, parallel), familial hypertrophic cardiomyopathy, FHC-associated mutant E924K; 2.50A {Homo sapiens} SCOP: h.1.26.1 PDB: 2fxm_A
Probab=66.99 E-value=35 Score=29.33 Aligned_cols=33 Identities=24% Similarity=0.340 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 381 QRADALKEENASLRSEVTRIRNEYEQLLAENAS 413 (453)
Q Consensus 381 ~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~ 413 (453)
.+++.|......|...+..|.+.++.....|..
T Consensus 69 E~~~~L~~~k~eLe~~l~el~~rleeeee~~~~ 101 (129)
T 2fxo_A 69 ERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNAE 101 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333333333333333
No 149
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=66.63 E-value=12 Score=29.60 Aligned_cols=24 Identities=17% Similarity=0.198 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 363 ESARRSRLRKQAECDELAQRADAL 386 (453)
Q Consensus 363 ESARRSR~RKqaelEeLE~rVe~L 386 (453)
.+-|+-|.+=...+++|..-|-.+
T Consensus 18 ~~Er~RR~~in~~f~~Lr~lvP~~ 41 (80)
T 1hlo_A 18 ALERKRRDHIKDSFHSLRDSVPSL 41 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHCcCC
Confidence 344444444455666666655443
No 150
>1dh3_A Transcription factor CREB; protein-DNA complex, transcription/DNA complex; HET: DNA; 3.00A {Mus musculus} SCOP: h.1.3.1
Probab=66.54 E-value=5.3 Score=30.23 Aligned_cols=26 Identities=27% Similarity=0.342 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 397 VTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 397 l~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
+..|..++..|+.||..|+.+|..|.
T Consensus 24 ~~~LE~~v~~L~~eN~~L~~~~~~L~ 49 (55)
T 1dh3_A 24 VKSLENRVAVLENQNKTLIEELKALK 49 (55)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445555555666655555543
No 151
>1fmh_B General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_B
Probab=66.42 E-value=9.5 Score=26.23 Aligned_cols=30 Identities=30% Similarity=0.480 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
++..|..+|+.|++.|-.-+.+++.|+.+|
T Consensus 2 evqalkkrvqalkarnyaakqkvqalrhkc 31 (33)
T 1fmh_B 2 EVQALKKRVQALKARNYAAKQKVQALRHKC 31 (33)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 355677777777777777777777766655
No 152
>2xv5_A Lamin-A/C; structural protein, intermediate filaments, nuclear membrane LEFT-handed coiled coil, right-handed coiled coil; HET: MSE; 2.40A {Homo sapiens}
Probab=66.36 E-value=39 Score=27.06 Aligned_cols=49 Identities=20% Similarity=0.256 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
.+.+.+...+..|+.+.+.++.+++....+++.|.+=.-.|-.+|...+
T Consensus 5 ~e~~~~~~~i~~lE~eL~~~r~e~~~ql~EYq~LlniKl~Le~EIatYR 53 (74)
T 2xv5_A 5 RERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYR 53 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678888999999999999999999999999999988888888887654
No 153
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=65.85 E-value=12 Score=26.46 Aligned_cols=28 Identities=21% Similarity=0.194 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
.|..++..|-.+...|+.|+..||+-|.
T Consensus 5 QLE~kVEeLl~~n~~Le~eV~rLk~ll~ 32 (34)
T 2oxj_A 5 QLEXKVXELLXKNXHLEXEVXRLKXLVX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHh
Confidence 4555555566666667777777776654
No 154
>3cvf_A Homer-3, homer protein homolog 3; coiled coil, alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism; 2.90A {Homo sapiens}
Probab=65.24 E-value=27 Score=28.60 Aligned_cols=48 Identities=21% Similarity=0.288 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
..+..|+.+++.-+.+-..++.++..|.+.+..-.-|...||+.|..|
T Consensus 27 ~~v~~le~~Le~s~~~q~~~~~Elk~l~e~Ld~KI~eL~elRqgLakL 74 (79)
T 3cvf_A 27 HQLRAMERSLEEARAERERARAEVGRAAQLLDVSLFELSELREGLARL 74 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 345566666666666666677777777777777777777777776654
No 155
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=64.89 E-value=7.2 Score=38.42 Aligned_cols=31 Identities=19% Similarity=0.342 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 380 AQRADALKEENASLRSEVTRIRNEYEQLLAE 410 (453)
Q Consensus 380 E~rVe~Le~EN~~Lr~el~~Lkee~~~L~sE 410 (453)
+++++.|+.+|+.|.+|++.|+++.+.+...
T Consensus 184 ~~eie~L~~~~~~L~eEi~~Le~~~e~~~k~ 214 (315)
T 2ve7_A 184 AFKLESLEAKNRALNEQIARLEQERSTANKA 214 (315)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3455555555555555555555554444443
No 156
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=64.68 E-value=18 Score=26.89 Aligned_cols=41 Identities=22% Similarity=0.471 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
+||.+|+.|+.-...|+.++..|-.++..- ...|+++|..+
T Consensus 2 dlEekv~~Le~~ld~LqTr~ArLlae~~ss---q~KlKqRit~l 42 (46)
T 3swy_A 2 ALEEKVEQLGSSLDTLQTRFARLLAEYNAT---QMKMKQRLSQL 42 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
Confidence 577777777777777777777766665443 34566666544
No 157
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=63.40 E-value=28 Score=29.40 Aligned_cols=30 Identities=13% Similarity=0.262 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQ 406 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~ 406 (453)
+.|+.+++.|+.....++.++..+.++..+
T Consensus 98 ~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~ 127 (133)
T 1fxk_C 98 NELESTLQKMGENLRAITDIMMKLSPQAEE 127 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444444444333
No 158
>1gk6_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, leucine zipper, fusion protein; 1.9A {Saccharomyces cerevisiae} SCOP: h.1.20.1
Probab=63.30 E-value=12 Score=28.59 Aligned_cols=42 Identities=24% Similarity=0.393 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
.+++..+..|+.+.+.++.++.....+++.|.+=.-.|-.+|
T Consensus 3 ~~~q~~i~~le~el~~~r~e~~~q~~eYq~LlniK~~Le~EI 44 (59)
T 1gk6_A 3 KQLEDKVEELLSKNYHLENEVARLKKLVGDLLNVKMALDIEI 44 (59)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 345556666666666666666666666665554444444444
No 159
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=63.25 E-value=33 Score=29.83 Aligned_cols=47 Identities=17% Similarity=0.169 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
..+-...|..|+..+..|..++..-+...+....||..|+.++..+.
T Consensus 35 ~~E~q~~v~ql~~~i~~Le~eL~e~r~~~q~a~~e~e~Lr~e~~~l~ 81 (120)
T 3i00_A 35 KTESQRVVLQLKGHVSELEADLAEQQHLRQQAADDCEFLRAELDELR 81 (120)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445678888888888888888888888889999999999998763
No 160
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=62.29 E-value=59 Score=26.97 Aligned_cols=10 Identities=40% Similarity=0.594 Sum_probs=4.6
Q ss_pred HhHHHHHHHH
Q 036551 360 SNRESARRSR 369 (453)
Q Consensus 360 sNRESARRSR 369 (453)
.-||+|+.-+
T Consensus 23 gKrEaA~Ee~ 32 (84)
T 1gmj_A 23 GKREQAEEER 32 (84)
T ss_dssp HHHHHHHHHH
T ss_pred ccHHHHhHHH
Confidence 3344555443
No 161
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=62.25 E-value=6.6 Score=29.37 Aligned_cols=24 Identities=21% Similarity=0.266 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEV 397 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el 397 (453)
.++++|+.+++.|+.+...|+..|
T Consensus 44 ~~~~~L~~ri~~Le~~l~~l~~~l 67 (70)
T 1zme_C 44 KYLQQLQKDLNDKTEENNRLKALL 67 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468888888888888877777654
No 162
>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*
Probab=62.18 E-value=4.1 Score=35.39 Aligned_cols=25 Identities=28% Similarity=0.492 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVT 398 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~ 398 (453)
.-+|+|+.++..|+-||..|+.++.
T Consensus 8 ~t~EeLaaeL~kLqmENK~LKkkl~ 32 (110)
T 2oa5_A 8 KTYEEMVKEVERLKLENKTLKQKVK 32 (110)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3478888888888888888888876
No 163
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=62.14 E-value=25 Score=26.65 Aligned_cols=34 Identities=12% Similarity=0.222 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 382 RADALKEENASLRSEVTRIRNEYEQLLAENASLK 415 (453)
Q Consensus 382 rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr 415 (453)
+++.|..+.+.|..++..|+.+...|+.+...-+
T Consensus 5 ki~~Lss~V~~L~~kVdqLssdV~al~~~v~~ak 38 (52)
T 1jcd_A 5 KADQASSDAQTANAKADQASNDANAARSDAQAAK 38 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555554444444444333
No 164
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=61.89 E-value=9.5 Score=39.02 Aligned_cols=50 Identities=12% Similarity=0.168 Sum_probs=41.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 372 KQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 372 KqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
.++.+++|+++++.++.++..|.+++.....+..+|.++...|+..|..+
T Consensus 15 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~rr~l~n~~~~l~gnIrV~ 64 (412)
T 3u06_A 15 LRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRDNIRVF 64 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 34556888888999999999999988888888888999999998877654
No 165
>4emc_A Monopolin complex subunit CSM1; RWD domain, kinetochore-binding, kinetoch replication-replication complex; 3.05A {Saccharomyces cerevisiae} PDB: 3n7n_A 3n4x_A
Probab=61.65 E-value=20 Score=33.65 Aligned_cols=16 Identities=25% Similarity=0.374 Sum_probs=5.9
Q ss_pred HHHHHHHHHHHHHHHH
Q 036551 382 RADALKEENASLRSEV 397 (453)
Q Consensus 382 rVe~Le~EN~~Lr~el 397 (453)
+++.|+.+.+.|+.+.
T Consensus 42 ei~~L~~ql~sl~~~~ 57 (190)
T 4emc_A 42 EIKQLQKQIDSLNAQV 57 (190)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhh
Confidence 3333333333333333
No 166
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=61.63 E-value=14 Score=37.43 Aligned_cols=50 Identities=10% Similarity=0.062 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 372 KQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 372 KqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
-++++++|+++++.|+.++..|.+++........+|.++..+|+..|..+
T Consensus 15 l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~rr~l~n~~~elkgnIrV~ 64 (403)
T 4etp_A 15 LKEKIAALKEKIKDTELGMKELNEILIKEETVRRTLHNELQELRGNIRVY 64 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCeEEE
Confidence 34556888888888888889998888888888888999999998877654
No 167
>3u59_A Tropomyosin beta chain; muscle contraction, actin, contractIle protein; 2.50A {Gallus gallus}
Probab=61.30 E-value=68 Score=26.42 Aligned_cols=49 Identities=20% Similarity=0.319 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 370 LRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 370 ~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
..-+..+..++.+...++.+...|..++..|..+++.+......+..+|
T Consensus 26 e~~e~~~k~~e~~~~~~E~ei~sL~kKiq~lE~eld~~~e~l~~a~~kL 74 (101)
T 3u59_A 26 EQAEADKKQAEDRCKQLEEEQQGLQKKLKGTEDEVEKYSESVKEAQEKL 74 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444444444455555555555555544444444444444333
No 168
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=61.16 E-value=55 Score=26.49 Aligned_cols=47 Identities=21% Similarity=0.277 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
..+++.+...+..|+.+...++.++.....+|+.|..=.-.|-.+|.
T Consensus 27 ~~~l~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIa 73 (86)
T 1x8y_A 27 ARERDTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIH 73 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 34566677777777777777777777777777766655555555544
No 169
>3a2a_A Voltage-gated hydrogen channel 1; voltage-gated proton channel, alternative splicing, coiled C transport, ionic channel, membrane, transmembrane; 2.00A {Homo sapiens}
Probab=61.01 E-value=22 Score=27.59 Aligned_cols=35 Identities=20% Similarity=0.292 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 366 RRSRLRKQAECDELAQRADALKEENASLRSEVTRIRN 402 (453)
Q Consensus 366 RRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lke 402 (453)
+-+|+|... ..|..+|+.|+..+.....||.+|..
T Consensus 12 q~~kLKq~n--~~L~~kv~~Le~~c~e~eQEieRL~~ 46 (58)
T 3a2a_A 12 QLLRLKQMN--VQLAAKIQHLEFSCSEKEQEIERLNK 46 (58)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444333 78888899998888888888877543
No 170
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=60.79 E-value=35 Score=32.09 Aligned_cols=50 Identities=10% Similarity=0.100 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
.++++|+.++..|+.+...+..++..+..++.+++.+...+++++.....
T Consensus 32 ~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~ 81 (256)
T 3na7_A 32 KDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQK 81 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666666666666666666666666666666666666555555443
No 171
>1p9i_A Cortexillin I/GCN4 hybrid peptide; coiled-coil, unknown function; 1.17A {Synthetic} SCOP: h.1.10.1
Probab=60.74 E-value=5 Score=27.27 Aligned_cols=22 Identities=32% Similarity=0.430 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcC
Q 036551 400 IRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 400 Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
|..-+..|++||.+|+.++.++
T Consensus 4 lnallasleaenkqlkakveel 25 (31)
T 1p9i_A 4 LNALLASLEAENKQLKAKVEEL 25 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556777777777777655
No 172
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=60.62 E-value=4.9 Score=40.19 Aligned_cols=48 Identities=13% Similarity=-0.010 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
+++..||.+|..++.+...|+..+..+++++++|......|..++...
T Consensus 4 ~~~~~lE~~Il~~~~~i~~L~~~l~~~~~ki~~L~~~i~~l~~~~~~~ 51 (319)
T 1fzc_C 4 EEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQEP 51 (319)
T ss_dssp ------CTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSC
T ss_pred HHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 456677788888888888888888888888888888888887776654
No 173
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=60.37 E-value=15 Score=37.69 Aligned_cols=43 Identities=12% Similarity=0.227 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKE 416 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~ 416 (453)
.++..|+++++.|+.|+..|+.++..|++++..++.|...|+.
T Consensus 49 ~~lk~le~~~~~L~~e~e~l~~~~~~~~~e~~~~~ee~~~l~~ 91 (428)
T 4b4t_K 49 FKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQS 91 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3456788888889999999999999999999999999888765
No 174
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=60.34 E-value=43 Score=35.22 Aligned_cols=42 Identities=17% Similarity=0.111 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 383 ADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 383 Ve~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
++.|.++-..|++++..|.++...++.+...+...|-++-..
T Consensus 118 ~~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~~l~~iPN~~~~ 159 (501)
T 1wle_A 118 YQSLRARGREIRKQLTLLYPKEAQLEEQFYLRALRLPNQTHP 159 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 344555555555555555555555555555555555555544
No 175
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=60.02 E-value=25 Score=36.96 Aligned_cols=41 Identities=20% Similarity=0.162 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 384 DALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 384 e~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
+.|.++-..|+.++..|.++...++.+...+...|-.+-..
T Consensus 74 ~~l~~~~~~l~~~i~~le~~~~~~~~~~~~~l~~iPN~~~~ 114 (485)
T 3qne_A 74 KDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQVGNIVHE 114 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCc
Confidence 34444555555555555555555555555555555555443
No 176
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=59.96 E-value=26 Score=30.82 Aligned_cols=33 Identities=18% Similarity=0.504 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQL 407 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L 407 (453)
..++|+.++..|+.+|..|..++..++.+++.|
T Consensus 51 ~~~eL~~~~~~Le~~n~~L~~~lke~~~~~~~l 83 (155)
T 2oto_A 51 RAEELEKAKQALEDQRKDLETKLKELQQDYDLA 83 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347788888888888888888888888777444
No 177
>2w83_C C-JUN-amino-terminal kinase-interacting protein 4; golgi apparatus, protein transport, ER-golgi transport, ARF, GTPase, effector, myristate; HET: GTP; 1.93A {Homo sapiens}
Probab=59.84 E-value=11 Score=30.81 Aligned_cols=19 Identities=21% Similarity=0.331 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 036551 402 NEYEQLLAENASLKERLGE 420 (453)
Q Consensus 402 ee~~~L~sEN~~Lr~qL~~ 420 (453)
.+.+.|..|+..|+.+|..
T Consensus 37 ~rvdELt~E~e~l~~El~s 55 (77)
T 2w83_C 37 AKVDELTCEKDVLQGELEA 55 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhHHHHHHHHHHH
Confidence 3344444444444444433
No 178
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=59.55 E-value=69 Score=32.63 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 384 DALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 384 e~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
+.|.++-..|+.++..|.++...++.+...+...|-++-..
T Consensus 67 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~~~~ 107 (421)
T 1ses_A 67 EALIARGKALGEEAKRLEEALREKEARLEALLLQVPLPPWP 107 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 34444444455555555555555555555555555555443
No 179
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=58.87 E-value=16 Score=29.70 Aligned_cols=27 Identities=22% Similarity=0.404 Sum_probs=13.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
+||.+|+.|+.-...|+.++.+|-.++
T Consensus 4 dlEEKv~~LE~sld~LQTrfARLLaEy 30 (74)
T 3swf_A 4 GLEEKVTRMESSVDLLQTRFARILAEY 30 (74)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555555555555544443
No 180
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=58.75 E-value=1.1e+02 Score=32.50 Aligned_cols=62 Identities=15% Similarity=0.115 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhcCCCccccccccccc
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKE----RLGEIPVQEDERSVRNDQ 434 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~----qL~~L~g~~~is~~rn~q 434 (453)
.++.++||.++..|+.....--..|..|+.-++.++.+...|.. ++....+++...+.+.-.
T Consensus 110 ~e~S~eLe~ri~yIK~kVd~qi~~IrvLq~~l~~q~skIQRLE~dI~~q~~~Cr~pC~r~~~y~VD 175 (491)
T 1m1j_A 110 GHVSTELRRRIVTLKQRVATQVNRIKALQNSIQEQVVEMKRLEVDIDIKIRACKGSCARSFDYQVD 175 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTBSSCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhHHhhhc
Confidence 35778888888888876655447777777777777777777754 455556666655544433
No 181
>3oa7_A Head morphogenesis protein, chaotic nuclear migra protein 67 fusion protein; coiled coils, structural protein, spindle POLE BODY; 2.30A {Bacillus phage PHI29}
Probab=58.71 E-value=20 Score=34.11 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 036551 383 ADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQED 426 (453)
Q Consensus 383 Ve~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~~~ 426 (453)
+++|+++--+..++.+.|....++|.+||..|+..|..+.|...
T Consensus 32 ~~~~~a~~~s~~s~~~dl~~s~~~l~ae~~~L~~~l~kLeGn~s 75 (206)
T 3oa7_A 32 LQQLRVNYGSFVSEYNDLTKSHNTLSKELDNLRSRFGNLEGNTS 75 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHccCCHH
Confidence 45566666777777888888888899999999999999998655
No 182
>4gkw_A Spindle assembly abnormal protein 6; double helix, SAS-5, centriole, structural protein; 3.30A {Caenorhabditis elegans}
Probab=58.47 E-value=1.1e+02 Score=27.75 Aligned_cols=42 Identities=31% Similarity=0.460 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 383 ADALKEENASLRSEVTR-------IRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 383 Ve~Le~EN~~Lr~el~~-------Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
|+.|..-.-.|++++.. .-..+++|..||..++++|...+.+
T Consensus 114 Ve~LT~TiG~LrKELEdEklK~~E~MdSFE~LkvENE~vkerl~mYR~Q 162 (167)
T 4gkw_A 114 VESLTETIGILRKELENEKLKAAENMDSFEKLSMENENLKEKIAHYRAQ 162 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHHHh
Confidence 44444444445544432 2244778999999999999987754
No 183
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=58.32 E-value=70 Score=25.63 Aligned_cols=51 Identities=20% Similarity=0.304 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 370 LRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 370 ~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
.|-...+..++..+..|+.+...++.++.....+|+.|..=.-.|-.+|..
T Consensus 22 ~~~~~~~~~~q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK~~Ld~EIat 72 (84)
T 1gk4_A 22 ENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIAT 72 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 333455677778888888888888888887777777666655555555543
No 184
>2wuj_A Septum site-determining protein diviva; bacterial cell division, septation, cell cycle, sporulation; 1.40A {Bacillus subtilis} PDB: 2wuk_A
Probab=58.04 E-value=10 Score=28.69 Aligned_cols=25 Identities=24% Similarity=0.623 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 398 TRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 398 ~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
..+.+.++.|..||..|+++|..+.
T Consensus 30 d~v~~~~~~l~~e~~~L~~~~~~l~ 54 (57)
T 2wuj_A 30 AQVRKDYEIVLRKKTELEAKVNELD 54 (57)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566667777777777776654
No 185
>1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus}
Probab=57.84 E-value=61 Score=34.05 Aligned_cols=31 Identities=29% Similarity=0.332 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 391 ASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 391 ~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
..|..+...|++++..|+.+..+|.++|..+
T Consensus 119 ~~l~~~~~~l~~~i~~l~~~~~~~~~~l~~~ 149 (501)
T 1wle_A 119 QSLRARGREIRKQLTLLYPKEAQLEEQFYLR 149 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666666777777777766666666543
No 186
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=57.58 E-value=35 Score=27.83 Aligned_cols=39 Identities=15% Similarity=0.198 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 385 ALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 385 ~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
.|+.....|..++..|..++..+..+...|+.+|..+.+
T Consensus 74 ~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk~~l~~~~~ 112 (117)
T 2zqm_A 74 ELKEKIETLEVRLNALERQEKKLNEKLKELTAQIQSALR 112 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 344455555666666666666666666666666665543
No 187
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=57.52 E-value=29 Score=29.92 Aligned_cols=26 Identities=23% Similarity=0.263 Sum_probs=10.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 385 ALKEENASLRSEVTRIRNEYEQLLAE 410 (453)
Q Consensus 385 ~Le~EN~~Lr~el~~Lkee~~~L~sE 410 (453)
..+.+...|..++..|+..++.|+.|
T Consensus 15 ~~~~ei~~L~~ei~eLk~~ve~lEkE 40 (106)
T 4e61_A 15 KSQETIGSLNEEIEQYKGTVSTLEIE 40 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333344444444443
No 188
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=57.12 E-value=38 Score=34.95 Aligned_cols=43 Identities=21% Similarity=0.221 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 036551 383 ADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQE 425 (453)
Q Consensus 383 Ve~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~~ 425 (453)
++.|..+-..|++++..|.++...++.+...+...|-++-..+
T Consensus 71 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~~~~~ 113 (455)
T 2dq0_A 71 VDELLAKSREIVKRIGELENEVEELKKKIDYYLWRLPNITHPS 113 (455)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 3455555555666666666666666666666666666665443
No 189
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=56.93 E-value=12 Score=35.87 Aligned_cols=42 Identities=14% Similarity=0.339 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLK 415 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr 415 (453)
+++..|+++++..+.|++++.+.+.+.+++..+++..-..+.
T Consensus 178 ~kl~~l~~~L~~~~~e~~s~~~~~~~~~~~~~~~~~~~~~~~ 219 (228)
T 3q0x_A 178 GTCHDLSDDLSRTRDDRDSMVAQLAQCRQQLAQLREQYDKHL 219 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 366888999999999999999988888777777776665544
No 190
>1uii_A Geminin; human, DNA replication, cell cycle; 2.00A {Homo sapiens} SCOP: h.1.28.1
Probab=56.79 E-value=24 Score=29.31 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
++-+.|..+|+.|+.|+..|+.++..|++-.
T Consensus 46 ~EN~~Lh~~ie~l~eEi~~lk~en~eL~ela 76 (83)
T 1uii_A 46 KENEKLHKEIEQKDNEIARLKKENKELAEVA 76 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446677777777777777777777665543
No 191
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=56.70 E-value=22 Score=36.60 Aligned_cols=53 Identities=9% Similarity=0.108 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQED 426 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~~~ 426 (453)
++.++||+++..|+.....-...|..|+.-++.++.+...|...|......+.
T Consensus 113 e~s~eLe~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~Id~c~~~C~ 165 (390)
T 1deq_A 113 QINEDLRSRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDIDIKIRSCK 165 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 57789999999998776665558888888888888888888887754444443
No 192
>1kd8_B GABH BLL, GCN4 acid base heterodimer base-D12LA16L; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kd9_B 1kdd_B
Probab=56.03 E-value=20 Score=25.57 Aligned_cols=27 Identities=22% Similarity=0.355 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 393 LRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 393 Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
|..+++.|..+...|+.|...|+..|.
T Consensus 6 LE~KVEeLl~~~~~Le~eV~RLk~ll~ 32 (36)
T 1kd8_B 6 LKAKVEELKSKLWHLKNKVARLKKKNA 32 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 444444444555556666666666554
No 193
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=56.02 E-value=40 Score=31.30 Aligned_cols=34 Identities=9% Similarity=0.014 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNEYEQLLAEN 411 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN 411 (453)
.-+..|+.|+++|..|..++...++++..+..+.
T Consensus 132 ~AertV~kLqkeiD~LEDeL~~eKek~k~i~~eL 165 (175)
T 3mud_A 132 YCLDTTAKNEKSIDDLEEKVAHAKEENLNMHQML 165 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344555555555555555555555555555443
No 194
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=55.13 E-value=49 Score=42.25 Aligned_cols=38 Identities=18% Similarity=0.380 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 383 ADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 383 Ve~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
++.++++...|.++++.|+++++++..|...|+.++..
T Consensus 2030 L~~~~~~L~~le~~l~~L~~~~~~~~~ek~~L~~e~~~ 2067 (3245)
T 3vkg_A 2030 QDEIVATITALEKSIATYKEEYATLIRETEQIKTESSK 2067 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444555555555555555555555555544
No 195
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=55.05 E-value=13 Score=32.02 Aligned_cols=23 Identities=22% Similarity=0.403 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTR 399 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~ 399 (453)
..|+.+++.|+..|..|...|..
T Consensus 46 q~L~~el~~l~~~~~~LE~~l~e 68 (129)
T 3tnu_B 46 QRLRAEIDNVKKQCANLQNAIAD 68 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHH
Confidence 34444444444444444444333
No 196
>2oto_A M protein; helical coiled coil, fibrinogen-binding, virulence factor, S active protein, toxin; 3.04A {Streptococcus pyogenes serotype M1} PDB: 2xny_M
Probab=55.02 E-value=45 Score=29.28 Aligned_cols=20 Identities=15% Similarity=0.275 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 036551 378 ELAQRADALKEENASLRSEV 397 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el 397 (453)
+|+.+.+.|+.++..++.+.
T Consensus 61 ~Le~~n~~L~~~lke~~~~~ 80 (155)
T 2oto_A 61 ALEDQRKDLETKLKELQQDY 80 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333333443333333333
No 197
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=54.98 E-value=9.3 Score=39.37 Aligned_cols=43 Identities=5% Similarity=0.095 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 379 LAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 379 LE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
+.+++..|+........+|..|++.+..+......|+.+|..|
T Consensus 89 ml~~~~~~e~~~~~~~~~i~~l~~~~~~~~~~i~~l~~~i~~l 131 (409)
T 1m1j_C 89 IIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQLKQKIAQL 131 (409)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3333334433333333344444444444444444444444433
No 198
>3m48_A General control protein GCN4; leucine zipper, synthetic peptide, alpha helix, activa amino-acid biosynthesis, DNA-binding, nucleus; 1.45A {Synthetic} PDB: 3i1g_A 2ahp_A* 2o7h_A
Probab=54.50 E-value=20 Score=25.13 Aligned_cols=26 Identities=27% Similarity=0.266 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 393 LRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 393 Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
|..+++.|..+...|+.|...|+.-|
T Consensus 5 LE~kVEeLl~~n~~Le~EV~RLk~Ll 30 (33)
T 3m48_A 5 LEAKVEELLSKNWNLENEVARLKKLV 30 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHh
Confidence 44445555555555666666666544
No 199
>3iv1_A Tumor susceptibility gene 101 protein; coiled_COIL, tumorigenesis, CELL_cycle regulation, alternative splicing, cell cycle, cell division; HET: MSE; 2.50A {Homo sapiens}
Probab=54.43 E-value=71 Score=26.10 Aligned_cols=24 Identities=25% Similarity=0.379 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 391 ASLRSEVTRIRNEYEQLLAENASL 414 (453)
Q Consensus 391 ~~Lr~el~~Lkee~~~L~sEN~~L 414 (453)
..|..+-..|...++.|...+.+|
T Consensus 49 ~~l~~E~~~l~~ni~~lk~K~~EL 72 (78)
T 3iv1_A 49 TRLDQEVAEVDKNIELLKKKDEEL 72 (78)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333444444444443
No 200
>3c3g_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-beta) backbone; helix bundle, foldamer, unknown function protein; HET: HMR B3Q B3D B3E B3L BIL B3K BAL GOL; 1.80A {Synthetic} PDB: 3heu_A* 3het_A* 3hev_A* 3hew_A* 3hey_A* 3hex_A* 3c3h_A*
Probab=54.16 E-value=24 Score=24.72 Aligned_cols=28 Identities=14% Similarity=0.148 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
.|..+++.|-.+...|+.|...|+.-|.
T Consensus 4 QLEdKvEeLl~~~~~Le~EV~RLk~lL~ 31 (33)
T 3c3g_A 4 XIEXKLXEIXSKXYHXENXLARIKXLLX 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 3455555555566666666777766554
No 201
>3q0x_A Centriole protein; centrosome protein, coiled coil mediated dimer, structural P; 3.02A {Chlamydomonas reinhardtii}
Probab=54.10 E-value=31 Score=33.05 Aligned_cols=20 Identities=20% Similarity=0.506 Sum_probs=7.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 036551 396 EVTRIRNEYEQLLAENASLK 415 (453)
Q Consensus 396 el~~Lkee~~~L~sEN~~Lr 415 (453)
+++.++.+...+.++..+.|
T Consensus 186 ~L~~~~~e~~s~~~~~~~~~ 205 (228)
T 3q0x_A 186 DLSRTRDDRDSMVAQLAQCR 205 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333
No 202
>2oa5_A Hypothetical protein BQLF2; MHR28B, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: PE5; 2.10A {Murid herpesvirus 4} SCOP: d.362.1.1 PDB: 2h3r_A*
Probab=53.97 E-value=7.5 Score=33.78 Aligned_cols=24 Identities=29% Similarity=0.415 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 397 VTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 397 l~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
++.|..++.+|+.||+.||.+|..
T Consensus 10 ~EeLaaeL~kLqmENK~LKkkl~~ 33 (110)
T 2oa5_A 10 YEEMVKEVERLKLENKTLKQKVKS 33 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 456777888899999999999975
No 203
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=53.81 E-value=73 Score=28.91 Aligned_cols=22 Identities=32% Similarity=0.255 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC
Q 036551 401 RNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 401 kee~~~L~sEN~~Lr~qL~~L~ 422 (453)
+.+.+.++..|..|+.+|.+..
T Consensus 107 r~~~~~~e~r~~~L~~ql~e~~ 128 (154)
T 2ocy_A 107 RKEKYAIEILNKRLTEQLREKD 128 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566666667776666543
No 204
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=53.53 E-value=68 Score=27.47 Aligned_cols=39 Identities=15% Similarity=0.245 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENA 412 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~ 412 (453)
++++.|+.++.+|+.........+..|..+.+.|..+..
T Consensus 18 ~e~~~l~~~~~el~~~l~~~~~~~~e~g~~~~~lq~~~~ 56 (125)
T 1joc_A 18 GEIEKLQTKVLELQRKLDNTTAAVQELGRENQSLQIKHT 56 (125)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccc
Confidence 366777777777776666555555555555555555443
No 205
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=53.53 E-value=45 Score=42.58 Aligned_cols=14 Identities=29% Similarity=0.378 Sum_probs=4.9
Q ss_pred HHHHHHHHHHHHHH
Q 036551 383 ADALKEENASLRSE 396 (453)
Q Consensus 383 Ve~Le~EN~~Lr~e 396 (453)
+++|+++.+.|+++
T Consensus 2037 L~~le~~l~~L~~~ 2050 (3245)
T 3vkg_A 2037 ITALEKSIATYKEE 2050 (3245)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 206
>2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A
Probab=53.43 E-value=39 Score=34.85 Aligned_cols=31 Identities=19% Similarity=0.192 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
.|..+...|++++..|+.+...|.++|..+.
T Consensus 73 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (455)
T 2dq0_A 73 ELLAKSREIVKRIGELENEVEELKKKIDYYL 103 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4666666677777777777777666665543
No 207
>2xzr_A Immunoglobulin-binding protein EIBD; cell adhesion, trimeric autotransporter adhesin, TAA; 2.80A {Enterobacteria phage p-eibd}
Probab=53.27 E-value=1.1e+02 Score=26.30 Aligned_cols=47 Identities=15% Similarity=0.203 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
-+++...+.++.+=.+|-..+..+...|-.++--|+.|...|+.-+.
T Consensus 61 ~aRlnsqQrQI~ENhkEMKq~aaqsaaLlsk~yh~ene~ar~kkl~~ 107 (114)
T 2xzr_A 61 SARLDSQQRQINENHKEMKQIEDKIEEILSKIYHIENEIARIKKLIK 107 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34455555555555555555556666666666666667777765554
No 208
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=52.32 E-value=1.1e+02 Score=26.14 Aligned_cols=47 Identities=21% Similarity=0.372 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
...+..++..+..|+.+...++.++.....+|+.|..=--.|-.+|.
T Consensus 76 ~~~l~~~q~~i~~lE~eL~~~r~em~~ql~EYq~Ll~vKl~Ld~EIa 122 (131)
T 3tnu_A 76 CMQLAQIQEMIGSVEEQLAQLRCEMEQQNQEYKILLDVKTRLEQEIA 122 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666677777777777777777777777766665555555554
No 209
>3w03_C DNA repair protein XRCC4; coiled-coil, NHEJ, DSBS repair, KU70/80, DNA-PKCS, DNA ligas binding protein; HET: DNA; 8.49A {Homo sapiens}
Probab=52.02 E-value=40 Score=31.42 Aligned_cols=31 Identities=19% Similarity=0.355 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYE 405 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~ 405 (453)
.+.+|..+++.|+++|..|+.+.+...++.+
T Consensus 153 ~~~~L~~~n~~LqkeNeRL~~E~n~~l~qlE 183 (184)
T 3w03_C 153 TIAENQAKNEHLQKENERLLRDWNDVQGRFE 183 (184)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3455566666666666666666555555443
No 210
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=52.00 E-value=41 Score=36.15 Aligned_cols=42 Identities=14% Similarity=0.133 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 036551 385 ALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQED 426 (453)
Q Consensus 385 ~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~~~ 426 (453)
+|+...+.|+.+|..-...+..|+.-.+.|+.+|..|....+
T Consensus 114 ELRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDId 155 (562)
T 3ghg_A 114 DLRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDID 155 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555555555555555556666666666666666665443
No 211
>3c3f_A Alpha/beta peptide with the GCN4-PLI SIDE chain S AN (alpha-alpha-alpha-beta) backbone...; helix bundle, foldamer, unknown function, de novo protein; HET: B3K B3D B3E BIL B3L BAL; 2.00A {Synthetic} SCOP: h.1.3.1
Probab=51.92 E-value=27 Score=24.59 Aligned_cols=28 Identities=14% Similarity=0.176 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
.|..+++.|-.+...|+.|...|+.-|.
T Consensus 5 QLEdKVEeLl~~~~~Le~EV~RLk~ll~ 32 (34)
T 3c3f_A 5 QIEXKLEXILSXLYHXENEXARIXKLLX 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 3444555555555556666666666553
No 212
>3qh9_A Liprin-beta-2; coiled-coil, dimerization, structural protein; 2.01A {Homo sapiens}
Probab=51.80 E-value=45 Score=27.53 Aligned_cols=47 Identities=17% Similarity=0.194 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
-+++.+|.-+|.+|+.|-.....++..-++++..|..+...=-..|.
T Consensus 25 ~qEi~~Lr~kv~elEnErlQyEkKLKsTK~El~~Lq~qLe~kd~ei~ 71 (81)
T 3qh9_A 25 LQELRHLKIKVEELENERNQYEWKLKATKAEVAQLQEQVALKDAEIE 71 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhHHHHH
Confidence 45667777777777777666666666666665555544443333333
No 213
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=51.75 E-value=12 Score=24.96 Aligned_cols=14 Identities=43% Similarity=0.707 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHHHH
Q 036551 386 LKEENASLRSEVTR 399 (453)
Q Consensus 386 Le~EN~~Lr~el~~ 399 (453)
|++.|..|+.|+..
T Consensus 5 lkqknarlkqeiaa 18 (28)
T 3ra3_B 5 LKQKNARLKQEIAA 18 (28)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHhhhHHHHHHHH
Confidence 33344444444433
No 214
>3mq9_A Bone marrow stromal antigen 2 fused to maltose-BI periplasmic protein; HIV, antiviral protein; 2.80A {Escherichia coli}
Probab=51.51 E-value=1.1e+02 Score=30.36 Aligned_cols=26 Identities=23% Similarity=0.317 Sum_probs=13.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 396 EVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 396 el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
++.+-..+++.|+.|...|..+|.++
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 462 (471)
T 3mq9_A 437 EKAQGQKKVEELEGEITTLNHKLQDA 462 (471)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344555555555555555544
No 215
>1lwu_C Fibrinogen gamma chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_C*
Probab=50.98 E-value=26 Score=35.07 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
.+.+..|+.+++.++.+.+.|..+|..|.+.|
T Consensus 25 ~~~i~~L~~~l~~~~~~i~~l~~~i~~l~~~~ 56 (323)
T 1lwu_C 25 DAQIQELSEMWRVNQQFVTRLQQQLVDIRQTC 56 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555555555555555555444443
No 216
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=50.63 E-value=42 Score=30.79 Aligned_cols=22 Identities=23% Similarity=0.418 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 036551 379 LAQRADALKEENASLRSEVTRI 400 (453)
Q Consensus 379 LE~rVe~Le~EN~~Lr~el~~L 400 (453)
|+.--+.++.-|..|..++..|
T Consensus 188 l~~ak~~ye~ln~~L~~eLp~l 209 (251)
T 2fic_A 188 LIKAQKVFEEMNVDLQEELPSL 209 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334444455555555544
No 217
>3trt_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural protein; 2.30A {Homo sapiens} PDB: 3klt_A*
Probab=50.61 E-value=69 Score=24.76 Aligned_cols=40 Identities=13% Similarity=0.142 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 381 QRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 381 ~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
.++++|......-..++...+.++..|+.....|..+|..
T Consensus 35 ~k~eel~~~~~~~~~~l~~~k~Ei~elrr~iq~L~~el~s 74 (77)
T 3trt_A 35 SKFADLSEAANRNNDALRQAKQESTEYRRQVQSLTMEVDA 74 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4555555555554555555555555555555555555543
No 218
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=50.33 E-value=19 Score=31.43 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLL 408 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~ 408 (453)
++|..+|+.|..|+..|++++..|++++....
T Consensus 28 ~~l~~~v~~l~~e~k~l~ke~~~l~~~~a~~~ 59 (171)
T 2zvf_A 28 AKLPKTVERFFEEWKDQRKEIERLKSVIADLW 59 (171)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47778888888888888888888777765543
No 219
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=49.70 E-value=1.2e+02 Score=25.80 Aligned_cols=47 Identities=15% Similarity=0.332 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
..+..+...+..|+.+...++.++.....+|+.|..=--.|-.+|..
T Consensus 75 ~~l~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Ld~EIat 121 (129)
T 3tnu_B 75 LALKDARNKLAELEEALQKAKQDMARLLREYQELMNTKLALDVEIAT 121 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666666666666666666666666666555555555543
No 220
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=49.69 E-value=23 Score=28.21 Aligned_cols=32 Identities=22% Similarity=0.338 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 371 RKQAECDELAQRADALKEENASLRSEVTRIRN 402 (453)
Q Consensus 371 RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lke 402 (453)
.|.+.+.+||..+..-..++..|+.++..++.
T Consensus 22 ~Kde~I~eLE~~L~~kd~eI~eLr~~LdK~qs 53 (67)
T 1zxa_A 22 LKEERIKELEKRLSEKEEEIQELKRKLHKCQS 53 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788888888777777777777666443
No 221
>3mov_A Lamin-B1; LMNB1, B-type lamins, intermediate filament (IF), nucleus, coiled coil, structural genomics consortium, SGC, structural protein; 2.40A {Homo sapiens} PDB: 3tyy_A
Probab=49.63 E-value=79 Score=26.24 Aligned_cols=45 Identities=27% Similarity=0.353 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
+++.++..+..|+.+...++.++.....+|+.|..=.-.|-.+|.
T Consensus 38 e~~~~q~~i~~lE~eL~~~r~e~~~ql~EYq~LlnvKl~Le~EIa 82 (95)
T 3mov_A 38 EKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEIS 82 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555666666666666666666655666555554444444443
No 222
>3bbp_D GRIP and coiled-coil domain-containing protein 2; golgi complex, GRIP domain, RAB GTPase, ARL GTPase, golgin, RAB effector, clAsp protein; HET: GTP; 3.00A {Homo sapiens}
Probab=49.31 E-value=9 Score=30.93 Aligned_cols=19 Identities=21% Similarity=0.359 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 036551 387 KEENASLRSEVTRIRNEYE 405 (453)
Q Consensus 387 e~EN~~Lr~el~~Lkee~~ 405 (453)
++-|..|..++..|++++.
T Consensus 42 EatnarL~eq~~lLK~EIR 60 (71)
T 3bbp_D 42 EATNAILMEQIKLLKSEIR 60 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 3334444444444444433
No 223
>3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A
Probab=49.31 E-value=56 Score=34.34 Aligned_cols=51 Identities=18% Similarity=0.322 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 371 RKQAECDELAQRADALKEEN----------ASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 371 RKqaelEeLE~rVe~Le~EN----------~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
.-+.++++|+.+...+.++. ..|..+...|++++..|+.+...|.++|..+
T Consensus 44 ~~~~~~~~l~~~rn~~sk~i~~~k~~~~~~~~l~~~~~~l~~~i~~le~~~~~~~~~~~~~ 104 (485)
T 3qne_A 44 KLRFDLDEHNKKLNSVQKEIGKRFKAKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSK 104 (485)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455554444444433 3466677777777777777777777766544
No 224
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=49.09 E-value=1.1e+02 Score=25.88 Aligned_cols=61 Identities=20% Similarity=0.264 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHhcC
Q 036551 361 NRESARRSRLRKQAECDELAQRADALK---EENASLRSEVTR--------------IRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 361 NRESARRSR~RKqaelEeLE~rVe~Le---~EN~~Lr~el~~--------------Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
|-.+|-..=..|+..+++|.+++..++ ..+..|+.++.. +.++.+.|..++..|+.++..|
T Consensus 10 ~L~~aEeaL~~kq~~id~lke~~~q~~~~~E~i~vLk~Qv~IY~~DF~aERadREkl~~eKe~L~~ql~~lq~q~~~L 87 (94)
T 3jsv_C 10 QLQQAEEALVAKQELIDKLKEEAEQHKIVMETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFNKL 87 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTC--
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 333444444445555555555554444 333444444433 3444444555555555444444
No 225
>1uo4_A General control protein GCN4; four helix bundle, cavity, iodobenzene; 1.70A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1uo3_A 1unt_A 1uo5_A 1unu_A 1unv_A 1uo1_A 2ccf_A 2cce_A 1unx_A 1unw_A 1w5j_A* 1w5k_A* 1u9f_A* 3f86_A* 3f87_A* 3hez_A* 3c3f_A*
Probab=48.97 E-value=30 Score=24.42 Aligned_cols=27 Identities=22% Similarity=0.278 Sum_probs=15.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 393 LRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 393 Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
|..+++.|-.+...|+.|...|+.-|.
T Consensus 6 LEdKVEeLl~~n~~Le~EV~RLk~LL~ 32 (34)
T 1uo4_A 6 IEDKGEEILSKLYHIENELARIKKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHc
Confidence 444455555555556666666665543
No 226
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=48.55 E-value=23 Score=24.01 Aligned_cols=25 Identities=16% Similarity=0.356 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRI 400 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~L 400 (453)
.+.||.+...|+...+.|.++++.|
T Consensus 3 wealekkcaalesklqalekkleal 27 (31)
T 3ljm_A 3 WEALEKKCAALESKLQALEKKLEAL 27 (31)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666665555555555443
No 227
>1ik9_A DNA repair protein XRCC4; DNA END joining, double-strand break repair, V(D)J recombination, protein-protein complex, coiled coil; HET: DNA; 2.30A {Homo sapiens} SCOP: b.59.1.1 h.1.11.1 PDB: 3ii6_A* 1fu1_A* 3rwr_A*
Probab=48.40 E-value=43 Score=31.49 Aligned_cols=23 Identities=9% Similarity=0.277 Sum_probs=8.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTR 399 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~ 399 (453)
..|..+++.|+.++..|.++++.
T Consensus 142 ~~L~~e~~~l~~~~~~l~~qlE~ 164 (213)
T 1ik9_A 142 EHLQKENERLLRDWNDVQGRFEK 164 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333333
No 228
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=48.08 E-value=9.5 Score=28.79 Aligned_cols=22 Identities=18% Similarity=0.291 Sum_probs=15.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLR 394 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr 394 (453)
..++++||.+|+.|+.....|.
T Consensus 48 ~~~~~~Le~ri~~Le~~l~~l~ 69 (72)
T 2er8_A 48 RARNEAIEKRFKELTRTLTNLT 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHh
Confidence 4678888888888877666554
No 229
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=47.78 E-value=28 Score=24.28 Aligned_cols=31 Identities=19% Similarity=0.519 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 391 ASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 391 ~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
..|++++..|++++.-|.-..+.|++++..+
T Consensus 4 salkekvsalkeqflmlmfkvsalkekvsal 34 (36)
T 3tq2_A 4 SALKEKVSALKEQFLMLMFKVSALKEKVSAL 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4566666667777777777777777776554
No 230
>2wq1_A General control protein GCN4; TAA, nucleus, coiled coil, DNA-binding, protein export, ION coordination, polar core residues; 1.08A {Saccharomyces cerevisiae} PDB: 2wq0_A 2wq2_A 2wq3_A 2wpz_A 2wpy_A 1ij0_A 1ij1_A 1gcm_A 1rb5_A 1rb6_A 1rb1_A 1rb4_A 1swi_A 3k7z_A 1zii_A 1zij_A 1ij2_A 1ij3_A 1zil_A 1zim_A ...
Probab=47.39 E-value=37 Score=23.80 Aligned_cols=28 Identities=14% Similarity=0.115 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
+|..+++.|..+...|+.|...|+.-|.
T Consensus 4 QLEdKVEell~~~~~le~EV~Rl~~ll~ 31 (33)
T 2wq1_A 4 QLEDKIEENTSKIYHNTNEIARNTKLVG 31 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 4555566666666667777777776554
No 231
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=47.16 E-value=14 Score=38.02 Aligned_cols=30 Identities=27% Similarity=0.406 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 391 ASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 391 ~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
..|+.++..++.++..+..+...+++++..
T Consensus 42 ~~l~~e~~r~~~e~~~~~~~~~~~~~~i~~ 71 (434)
T 4b4t_M 42 RIFRSELQRLSHENNVMLEKIKDNKEKIKN 71 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333333333334444444444444444443
No 232
>2b5u_A Colicin E3; high resolution colicin E3, ribosome inactivation, ribosome inhibitor, hydrolase; HET: CIT; 2.30A {Escherichia coli} SCOP: b.101.1.1 b.110.1.1 h.4.9.1 PDB: 1jch_A* 1ujw_B* 2ysu_B 1e44_B 2xfz_Y* 2xg1_Y*
Probab=47.16 E-value=1.4e+02 Score=32.00 Aligned_cols=27 Identities=26% Similarity=0.272 Sum_probs=16.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 362 RESARRSRLRKQAECDELAQRADALKE 388 (453)
Q Consensus 362 RESARRSR~RKqaelEeLE~rVe~Le~ 388 (453)
-|.|+|-=++-+++|++.+.-++.++.
T Consensus 316 ~~~Aer~~e~a~ael~~a~k~~a~~~e 342 (551)
T 2b5u_A 316 VEAAERNYERARAELNQANEDVARNQE 342 (551)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 366777666666666666555555444
No 233
>2zdi_C Prefoldin subunit alpha; chaperone, cytoplasm; 3.00A {Pyrococcus horikoshii}
Probab=47.15 E-value=46 Score=28.91 Aligned_cols=41 Identities=7% Similarity=0.195 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKER 417 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~q 417 (453)
+.|+.+++.|+.....|...+..+++++..++.....|..+
T Consensus 101 ~~l~~ri~~l~~~l~~l~~~l~~l~~~i~~~~~~l~~l~~~ 141 (151)
T 2zdi_C 101 SFLEKRLKEYDEAIKKTQGALAELEKRIGEVARKAQEVQQK 141 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444455555555555555555555555555555443
No 234
>1kd8_A GABH AIV, GCN4 acid base heterodimer acid-D12IA16V; coiled coil heterodimer, de novo protein; 1.90A {Synthetic} SCOP: h.1.3.1 PDB: 1kdd_A 1kd9_A
Probab=47.06 E-value=34 Score=24.41 Aligned_cols=24 Identities=33% Similarity=0.299 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 395 SEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 395 ~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
.++..|..+...|+.|...|+..|
T Consensus 8 ~kVEeLl~~~~~Le~EV~RL~~ll 31 (36)
T 1kd8_A 8 AEVEEIESEVWHLENEVARLEKEN 31 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHh
Confidence 333333444444555555555444
No 235
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=46.75 E-value=50 Score=30.12 Aligned_cols=17 Identities=29% Similarity=0.288 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHH
Q 036551 370 LRKQAECDELAQRADAL 386 (453)
Q Consensus 370 ~RKqaelEeLE~rVe~L 386 (453)
++|++++.+|..+...+
T Consensus 22 ~~K~~~LqeL~~Q~vaf 38 (155)
T 2aze_A 22 KQKQSQLQELILQQIAF 38 (155)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 46788888887655543
No 236
>3ol1_A Vimentin; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, structural protein; 2.81A {Homo sapiens} PDB: 3uf1_A
Probab=46.74 E-value=1.3e+02 Score=25.46 Aligned_cols=33 Identities=21% Similarity=0.199 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 386 LKEENASLRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 386 Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
++.+...|++.+..+.-....|+.+...|+++|
T Consensus 67 ~E~di~~lrK~lD~~~l~r~dLE~~iesL~eEl 99 (119)
T 3ol1_A 67 AENTLQSFRQDVDNASLARLDLERKVESLQEEI 99 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHH
Confidence 344444555554443333333444444444443
No 237
>3uux_B Mitochondrial division protein 1; tetratricopeptide repeat, mitochondrial fission, mitochondri cytoplasm, apoptosis; 3.90A {Saccharomyces cerevisiae S288C}
Probab=45.52 E-value=55 Score=31.83 Aligned_cols=51 Identities=14% Similarity=0.239 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
..++.++..+++.|...-..+..+|..|.+.=..|+.+...++.+|..++.
T Consensus 176 ~sEI~EID~KI~~L~~mR~~vl~RLA~lEqdEl~LE~eL~~V~~Rief~qE 226 (242)
T 3uux_B 176 LSEIRDIEVEVENLRQKKEKLLGKIANIEQNQLLLEDNLKQIDDRLDFLEE 226 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999999999999887765
No 238
>3a5t_A Transcription factor MAFG; protein-DNA complex, BZIP factor, acetylation, DNA-binding, isopeptide bond, nucleus; 2.80A {Mus musculus}
Probab=45.40 E-value=4.9 Score=34.58 Aligned_cols=36 Identities=28% Similarity=0.434 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 389 ENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 389 EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
+...|..++..|..+.+.|..||..|+.++..+..+
T Consensus 59 ~~~~LE~e~~~L~~e~e~L~~En~~l~~E~~~lk~k 94 (107)
T 3a5t_A 59 QKEELEKQKAELQQEVEKLASENASMKLELDALRSK 94 (107)
T ss_dssp HHHHHHHHHTTTSSTTTTTTSTTSHHHHTTTSSSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455555555555555666666666666665543
No 239
>1fmh_A General control protein GCN4; coiled coil, leucine zipper, inter-helical ION pairing, transcription; NMR {Synthetic} SCOP: k.6.1.1 PDB: 1u2u_A
Probab=45.31 E-value=32 Score=23.61 Aligned_cols=23 Identities=26% Similarity=0.416 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Q 036551 399 RIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 399 ~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
+|..+..+.++||-+|.+++..+
T Consensus 5 qlekevaqaeaenyqleqevaql 27 (33)
T 1fmh_A 5 QLEKEVAQAEAENYQLEQEVAQL 27 (33)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHHHHHHHH
Confidence 34444444555555555544443
No 240
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=45.07 E-value=70 Score=25.75 Aligned_cols=12 Identities=25% Similarity=0.462 Sum_probs=4.4
Q ss_pred HHHHHHHHHHHH
Q 036551 377 DELAQRADALKE 388 (453)
Q Consensus 377 EeLE~rVe~Le~ 388 (453)
++|-.++..++.
T Consensus 14 eel~~klk~~~e 25 (71)
T 1uix_A 14 EELNNKLKEAQE 25 (71)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 333333333333
No 241
>1wlq_A Geminin; coiled-coil; 2.80A {Mus musculus} PDB: 2zxx_A*
Probab=45.06 E-value=61 Score=26.85 Aligned_cols=25 Identities=24% Similarity=0.328 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIR 401 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lk 401 (453)
+.|..+++.++.|...|+.++..|+
T Consensus 41 ~~Lh~~ie~~~eEi~~Lk~en~~L~ 65 (83)
T 1wlq_A 41 EKLHKEIEQKDSEIARLRKENKDLA 65 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555555555555555443
No 242
>1s1c_X RHO-associated, coiled-coil containing protein kinase 1; GTPase, RHO kinase, ROCK, signaling protein; HET: GNP; 2.60A {Homo sapiens} SCOP: h.1.27.1
Probab=45.04 E-value=75 Score=25.55 Aligned_cols=30 Identities=23% Similarity=0.422 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNEYEQL 407 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee~~~L 407 (453)
+|...|+.|..|+..|..++..+.+++..+
T Consensus 3 ~L~k~i~~l~~E~eel~~klk~~~ee~~~~ 32 (71)
T 1s1c_X 3 MLTKDIEILRRENEELTEKMKKAEEEYKLE 32 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555555555554444443
No 243
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=44.87 E-value=1.5e+02 Score=25.34 Aligned_cols=46 Identities=17% Similarity=0.211 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
+|+..+.+|-.....|.++-=.|..+...-.-|...|+.++.++ ++
T Consensus 46 ~L~e~~keLh~~I~~lEeEKYDlE~kv~kq~yEI~eL~~rV~dl-gK 91 (107)
T 1ytz_T 46 KLRDKAKELWDWLYQLQTEKYDFAEQIKRKKYEIVTLRNRIDQA-QK 91 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHh-cC
Confidence 34444444444444444444444455555667788888888888 54
No 244
>2zvf_A Alanyl-tRNA synthetase; C-terminal, oligomerization domain, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding; 3.20A {Archaeoglobus fulgidus}
Probab=44.86 E-value=13 Score=32.41 Aligned_cols=25 Identities=28% Similarity=0.287 Sum_probs=10.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 393 LRSEVTRIRNEYEQLLAENASLKER 417 (453)
Q Consensus 393 Lr~el~~Lkee~~~L~sEN~~Lr~q 417 (453)
|..+++.|.+++..|+.|+..|+.+
T Consensus 30 l~~~v~~l~~e~k~l~ke~~~l~~~ 54 (171)
T 2zvf_A 30 LPKTVERFFEEWKDQRKEIERLKSV 54 (171)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444433
No 245
>1gk6_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, leucine zipper, fusion protein; 1.9A {Saccharomyces cerevisiae} SCOP: h.1.20.1
Probab=44.42 E-value=1e+02 Score=23.34 Aligned_cols=47 Identities=26% Similarity=0.239 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
+..+..|+.++..++.+-.....+.+.|-.-...|..|....|.-|.
T Consensus 6 q~~i~~le~el~~~r~e~~~q~~eYq~LlniK~~Le~EIatYRkLLE 52 (59)
T 1gk6_A 6 EDKVEELLSKNYHLENEVARLKKLVGDLLNVKMALDIEIATYRKLLE 52 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHc
Confidence 45678888888889888888888888888888889999988887775
No 246
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=44.41 E-value=53 Score=26.37 Aligned_cols=35 Identities=17% Similarity=0.286 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 386 LKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 386 Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
|+.....|..++..|..+...+..+...|+..|..
T Consensus 70 L~~~~e~i~~~i~~le~~~~~~~~~l~~lk~~l~~ 104 (107)
T 1fxk_A 70 LQEKLETLQLREKTIERQEERVMKKLQEMQVNIQE 104 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444555555555555566666666665544
No 247
>2lz1_A Nuclear factor erythroid 2-related factor 2; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=44.39 E-value=0.46 Score=39.96 Aligned_cols=22 Identities=32% Similarity=0.507 Sum_probs=19.4
Q ss_pred HHHHHHHHHhHHHHHHHHHHHH
Q 036551 352 LKRQRRKQSNRESARRSRLRKQ 373 (453)
Q Consensus 352 lKReRRKqsNRESARRSR~RKq 373 (453)
.+-.||+-+||.+|++||.||.
T Consensus 65 IrdiRRRgKNkvAAqnCRKRKl 86 (90)
T 2lz1_A 65 IRDIRRRGKNKVAAQNCRKRKL 86 (90)
T ss_dssp HHHHHHHSCSCCCCCCCSCCCC
T ss_pred HHHHHHhhhhHHHHHHcchhhc
Confidence 4668899999999999999984
No 248
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=44.13 E-value=46 Score=27.51 Aligned_cols=31 Identities=19% Similarity=0.283 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
+.+.+++.+...|+..|..|..++++|..++
T Consensus 49 ~r~~e~e~r~k~le~~n~~l~~riqELE~qa 79 (83)
T 4ath_A 49 QRAKDLENRQKKLEHANRHLLLRVQELEMQA 79 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 4456667777778888888888877766554
No 249
>2hy6_A General control protein GCN4; protein design, parallel heptamer, protein structure, biosyn protein; 1.25A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2nrn_A 3crp_A 2b1f_A 3crp_B 2ipz_A 3ck4_A 3ck4_B 2b22_A 1ce9_A
Probab=43.98 E-value=46 Score=23.47 Aligned_cols=28 Identities=21% Similarity=0.277 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
.|..+++.|-.+...|+.|...|+.-|.
T Consensus 5 QLEdkVEeLl~~~~~Le~eV~RL~~ll~ 32 (34)
T 2hy6_A 5 QLADAVEELASANYHLANAVARLAKAVG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 3444555555555556666777766554
No 250
>2bni_A General control protein GCN4; four helix bundle, antiparallel four helix bundle acyl transferase; HET: TYZ; 1.5A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 2ccn_A 1w5k_A* 2ccf_A 2cce_A 1w5j_A* 1uo2_A 1gcl_A 1uo1_A 1unv_A 1uo0_A 1unt_A 1uo5_A 1unz_A 1unx_A 1unu_A 1unw_A 1uo4_A 1uo3_A 1uny_A 1u9f_A* ...
Probab=43.62 E-value=35 Score=24.07 Aligned_cols=28 Identities=21% Similarity=0.336 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
.|..+++.|-.+...|+.|...||.-|.
T Consensus 5 QLEdKvEeLl~~~~~L~~EV~RLk~lL~ 32 (34)
T 2bni_A 5 QIEDKLEEILSKGHHICNELARIKKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHHhc
Confidence 3444555555555556666666665543
No 251
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=42.84 E-value=30 Score=25.44 Aligned_cols=20 Identities=20% Similarity=0.403 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 036551 384 DALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 384 e~Le~EN~~Lr~el~~Lkee 403 (453)
..|+.|.+.|.+++..|+.+
T Consensus 23 aaleselqalekklaalksk 42 (48)
T 1g6u_A 23 AALESELQALEKKLAALKSK 42 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33444444444444444433
No 252
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=42.81 E-value=1e+02 Score=29.39 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 383 ADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 383 Ve~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
++..+.+...++.++..++.++..++.+...++.+|...
T Consensus 117 ~~~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~ 155 (369)
T 4dk0_A 117 LNTAKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYT 155 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 334444555555666666666666777777777666543
No 253
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=42.72 E-value=79 Score=25.73 Aligned_cols=37 Identities=5% Similarity=0.093 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 383 ADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 383 Ve~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
++.++.+...|..++..|+++...|..+...|+.++.
T Consensus 66 i~~~~~~l~~l~~~i~~l~~~i~~l~~~~~~l~~~~~ 102 (112)
T 1l8d_A 66 LSKYHLDLNNSKNTLAKLIDRKSELERELRRIDMEIK 102 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444445555555555555555555555555555
No 254
>3he5_A Synzip1; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=42.71 E-value=53 Score=24.22 Aligned_cols=29 Identities=17% Similarity=0.313 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
+..||.+-+.|+..|-.-+.-+.-|..++
T Consensus 12 vaslenenetlkkknlhkkdliaylekei 40 (49)
T 3he5_A 12 VASLENENETLKKKNLHKKDLIAYLEKEI 40 (49)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcccHHHHHhcccHHHHHHHHHHHH
Confidence 33444444444444433333333333333
No 255
>2lq4_p Lysophosphatidic acid receptor 1; GPCR, G protein-coupled receptor, de novo protein; NMR {Artificial gene}
Probab=42.51 E-value=5 Score=32.15 Aligned_cols=45 Identities=24% Similarity=0.407 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 375 ECDELAQRADALKEEN---------------------ASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 375 elEeLE~rVe~Le~EN---------------------~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
++..||.++.+|+.|. +.|++++.+|+=+++.|...|.+|+.+|.
T Consensus 14 elqalekelaqlekelqawncicdiencsnmaplysdqalkkklaqlkwklqalkkknaqlkkklq 79 (80)
T 2lq4_p 14 ELQALEKELAQLEKELQAWNCICDIENCSNMAPLYSDQALKKKLAQLKWKLQALKKKNAQLKKKLQ 79 (80)
T ss_dssp TTHHHHTTHHHHHHHHTTTCSSCCCCCCCSSCCCCCSTTTHHHHHTTHHHHHHHTTTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccccccccchHHHHHHHHHHHHHHHHHHHhhHHHHHHhc
Confidence 3456777777777765 35788888888888899999999988875
No 256
>1ykh_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.00A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=42.32 E-value=52 Score=28.68 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 380 AQRADALKEENASLRSEVTRIRNEYEQLLAENASL 414 (453)
Q Consensus 380 E~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~L 414 (453)
.+++..|+.||.....++....++.+.|..+...+
T Consensus 91 ~~ri~~L~~E~~~~~~el~~~v~e~e~ll~~v~~~ 125 (132)
T 1ykh_B 91 LRKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSM 125 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666666666665555555554444433
No 257
>1yke_B RNA polymerase II holoenzyme component SRB7; gene regulation; 3.30A {Saccharomyces cerevisiae} SCOP: a.252.1.1
Probab=42.18 E-value=51 Score=29.51 Aligned_cols=41 Identities=22% Similarity=0.225 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 379 LAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 379 LE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
-.+++..|+.||.....++....++.+.|..+...+-..+.
T Consensus 90 Q~~ri~~Le~E~~~~~~el~~~v~eae~ll~~v~~~l~~ia 130 (151)
T 1yke_B 90 QLRKIDMLQKKLVEVEDEKIEAIKKKEKLLRHVDSLIEDFV 130 (151)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677777777777777777666666666555555444443
No 258
>3swk_A Vimentin; cytoskeleton, intermediate filament, alpha-helix, structural; 1.70A {Homo sapiens}
Probab=42.15 E-value=39 Score=27.49 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENAS 413 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~ 413 (453)
++++|..++..+..+|..|..++..++...+.++..-..
T Consensus 1 Ei~eLr~qi~~l~~e~~~l~~e~dn~~~~~edfk~KyE~ 39 (86)
T 3swk_A 1 EMRELRRQVDQLTNDKARVEVERDNLAEDIMRLREKLQE 39 (86)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
No 259
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=42.08 E-value=1.9e+02 Score=30.33 Aligned_cols=16 Identities=31% Similarity=0.424 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHhHHHH
Q 036551 350 RELKRQRRKQSNRESA 365 (453)
Q Consensus 350 rElKReRRKqsNRESA 365 (453)
.++|..-..++|+.+.
T Consensus 103 qeLe~~l~~lsn~Ts~ 118 (464)
T 1m1j_B 103 RDLKDRVAKFSDTSTT 118 (464)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhhH
Confidence 4455555556665554
No 260
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=41.45 E-value=98 Score=32.48 Aligned_cols=39 Identities=23% Similarity=0.305 Sum_probs=24.0
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 036551 387 KEE-NASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQE 425 (453)
Q Consensus 387 e~E-N~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~~ 425 (453)
.++ -..|+.++..|.++...++.+...+...|-++-..+
T Consensus 109 ~~~~~~~l~~~i~~le~~~~~~~~~~~~~l~~iPN~~~~~ 148 (484)
T 3lss_A 109 LKQLSKDLSDQVAGLAKEAQQLEEERDKLMLNVGNILHES 148 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 444 556666666666666666666666666666655443
No 261
>2wvr_A Geminin; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens}
Probab=41.38 E-value=78 Score=30.16 Aligned_cols=28 Identities=39% Similarity=0.501 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 389 ENASLRSEVTRIRNEYEQLLAENASLKE 416 (453)
Q Consensus 389 EN~~Lr~el~~Lkee~~~L~sEN~~Lr~ 416 (453)
||..|..+|..|.+++..|+.||..|++
T Consensus 116 EN~~Lh~~ie~l~eEi~~LkeEn~eLke 143 (209)
T 2wvr_A 116 ENEKLHKEIEQKDNEIARLKKENKELAE 143 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555555555555555555544443
No 262
>3he4_A Synzip6; heterodimeric coiled-coil, de novo protein; 2.46A {Artificial gene}
Probab=41.26 E-value=37 Score=25.66 Aligned_cols=36 Identities=19% Similarity=0.384 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAE 410 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sE 410 (453)
+-..||.-|..|+..|..|.+.+..|...+..|+..
T Consensus 18 enaklenivarlendnanlekdianlekdianlerd 53 (56)
T 3he4_A 18 ENAKLENIVARLENDNANLEKDIANLEKDIANLERD 53 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcchHHHHHHHHhcccchHHHHHHHHHHHHHHHHHh
Confidence 345577778888889999988888887777766644
No 263
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=41.17 E-value=64 Score=26.10 Aligned_cols=49 Identities=14% Similarity=0.276 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
.++.++..+++.|...-+.+..++..|.+.=..|+.+...+..+|..++
T Consensus 21 sEI~EID~Ki~nL~~mR~ivldRlA~lEqdE~~LE~~l~~i~~rle~~q 69 (72)
T 2xu6_A 21 SEIRDIEVEVENLRQKKEKLLGKIANIEQNQLMLEDNLKQIDDRLDFLE 69 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 5778888888888888888888888888887777777777777766543
No 264
>3jsv_C NF-kappa-B essential modulator; ubiquitin, coiled-coil, cellular signaling, cytoplasm, isopeptide bond, nucleus, phosphoprotein, UBL conjugation; 2.70A {Mus musculus} PDB: 3f89_A 2zvo_B 2zvn_B
Probab=41.11 E-value=1.6e+02 Score=24.81 Aligned_cols=44 Identities=25% Similarity=0.261 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEE-------NASLRSEVTRIRNEYEQLLAENASLKER 417 (453)
Q Consensus 374 aelEeLE~rVe~Le~E-------N~~Lr~el~~Lkee~~~L~sEN~~Lr~q 417 (453)
+.++-|+++|+.++.. -..|..+...|.+++..|..+|..|...
T Consensus 40 E~i~vLk~Qv~IY~~DF~aERadREkl~~eKe~L~~ql~~lq~q~~~L~~~ 90 (94)
T 3jsv_C 40 ETVPVLKAQADIYKADFQAERHAREKLVEKKEYLQEQLEQLQREFNKLKVG 90 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHTTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 6667777777766533 2346667777888888888888777654
No 265
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=40.88 E-value=1.4e+02 Score=24.07 Aligned_cols=43 Identities=23% Similarity=0.339 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 371 RKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 371 RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
.||++++.|..-|..|+. ++....+-..+|+.++.-++..+..
T Consensus 14 ~Kq~EI~rLnvlvgslR~-------KLiKYtelnKKLe~~~~~~q~s~~~ 56 (74)
T 2q6q_A 14 EKQNEIFELKKIAETLRS-------KLEKYVDITKKLEDQNLNLQIKISD 56 (74)
T ss_dssp HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhhhhhHH
Confidence 345555555555554443 3333333344444444444444433
No 266
>2zqm_A Prefoldin beta subunit 1; chaperone; HET: CIT; 1.90A {Thermococcus SP} PDB: 2zdi_A
Probab=40.84 E-value=61 Score=26.36 Aligned_cols=31 Identities=16% Similarity=0.358 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNEYEQLL 408 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~ 408 (453)
.|+.+++.|+.+...|..++..+..++..|.
T Consensus 74 ~L~~~~e~ie~~i~~le~~~~~l~~~l~~lk 104 (117)
T 2zqm_A 74 ELKEKIETLEVRLNALERQEKKLNEKLKELT 104 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444444343
No 267
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=40.75 E-value=56 Score=22.50 Aligned_cols=26 Identities=15% Similarity=0.280 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee 403 (453)
.||+++..|..-.+.|++++..|.+-
T Consensus 3 rlee~~r~l~~ivq~lq~r~drle~t 28 (32)
T 2akf_A 3 RLEEDVRNLNAIVQKLQERLDRLEET 28 (32)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666666666666666666665544
No 268
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=40.26 E-value=82 Score=23.56 Aligned_cols=32 Identities=19% Similarity=0.229 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLL 408 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~ 408 (453)
+.-|+.|..|+.+...|..++..-++++..+.
T Consensus 8 efAERsV~KLek~ID~LEdeL~~eKek~~~i~ 39 (52)
T 2z5i_A 8 YHLENEVARLKKLVDDLEDELYAQKLKYKAIS 39 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 44445555555555555555444444444443
No 269
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=40.22 E-value=72 Score=26.45 Aligned_cols=21 Identities=14% Similarity=0.143 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLR 394 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr 394 (453)
+++..|+.+.+.|+++...|.
T Consensus 8 ~~i~~L~~q~~~L~~ei~~~~ 28 (85)
T 3viq_B 8 SRVHLLEQQKEQLESSLQDAL 28 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444444
No 270
>1lwu_B Fibrinogen beta chain; heterotrimer, protein-peptide complex, blood clotting; HET: NDG MAN NAG BMA GAL; 2.80A {Petromyzon marinus} SCOP: d.171.1.1 h.1.8.1 PDB: 1n73_B*
Probab=40.19 E-value=45 Score=33.27 Aligned_cols=28 Identities=14% Similarity=0.236 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 393 LRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 393 Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
|+.+++.|++++.+|+.+...|+..+..
T Consensus 33 Lq~~le~L~~KI~~LE~~v~~q~~~~~~ 60 (323)
T 1lwu_B 33 MKSVLEHLRAKMQRMEEAIKTQKELCSA 60 (323)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4444444455555555555555554443
No 271
>3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A*
Probab=40.01 E-value=1.1e+02 Score=32.19 Aligned_cols=28 Identities=14% Similarity=0.235 Sum_probs=19.4
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 394 RSE-VTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 394 r~e-l~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
.++ ...|++++..|+.+...|.++|..+
T Consensus 109 ~~~~~~~l~~~i~~le~~~~~~~~~~~~~ 137 (484)
T 3lss_A 109 LKQLSKDLSDQVAGLAKEAQQLEEERDKL 137 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556 6677777777777777777776544
No 272
>2aze_A Transcription factor DP-1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.1
Probab=39.98 E-value=65 Score=29.37 Aligned_cols=31 Identities=10% Similarity=0.244 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 383 ADALKEENASLRSEVTRIRNEYEQLLAENAS 413 (453)
Q Consensus 383 Ve~Le~EN~~Lr~el~~Lkee~~~L~sEN~~ 413 (453)
++.|+.|...++.+|..-++++++|..+...
T Consensus 7 ~~~Le~Ek~~~~~rI~~K~~~LqeL~~Q~va 37 (155)
T 2aze_A 7 CQNLEVERQRRLERIKQKQSQLQELILQQIA 37 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444444444444444444433333
No 273
>2z5i_A TM, general control protein GCN4 and tropomyosin alpha-1 chain; coiled coil, actin, troponin, cytoskeleton, cardiomyopathy; 2.10A {Saccharomyces cerevisiae} PDB: 2z5h_A 1kql_A 1mv4_A 2g9j_C
Probab=39.39 E-value=56 Score=24.48 Aligned_cols=38 Identities=21% Similarity=0.251 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 381 QRADALKEENASLRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 381 ~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
.+.+.-++..+.|.++|..|..++..-..++..+.+.|
T Consensus 5 ~~aefAERsV~KLek~ID~LEdeL~~eKek~~~i~~eL 42 (52)
T 2z5i_A 5 SKNYHLENEVARLKKLVDDLEDELYAQKLKYKAISEEL 42 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 44455555555555555555555554444444444444
No 274
>1fxk_A Prefoldin; archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1 PDB: 1fxk_B
Probab=38.97 E-value=95 Score=24.86 Aligned_cols=24 Identities=0% Similarity=0.151 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 394 RSEVTRIRNEYEQLLAENASLKER 417 (453)
Q Consensus 394 r~el~~Lkee~~~L~sEN~~Lr~q 417 (453)
..++..+..++..|..+...|..+
T Consensus 71 ~~~~e~i~~~i~~le~~~~~~~~~ 94 (107)
T 1fxk_A 71 QEKLETLQLREKTIERQEERVMKK 94 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333333
No 275
>2v66_B Nuclear distribution protein NUDE-like 1; structural protein, developmental protein, structural protei phosphorylation, transport, microtubule; 2.10A {Homo sapiens}
Probab=38.74 E-value=1.9e+02 Score=24.90 Aligned_cols=54 Identities=20% Similarity=0.239 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 366 RRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 366 RRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
|..+..=+.++-+||+.-++|+...-....-+..+..++......|..|..+|.
T Consensus 48 r~~~~~l~~~iReLEq~NDDLER~~R~t~~SLeD~E~k~n~aiErnalLE~El~ 101 (111)
T 2v66_B 48 RAIKEQLHKYVRELEQANDDLERAKRATIVSLEDFEQRLNQAIERNAFLESELD 101 (111)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444556666666666666666666666677777777777777777766664
No 276
>1fxk_C Protein (prefoldin); archaeal protein, chaperone; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.2.5.1
Probab=38.73 E-value=72 Score=26.87 Aligned_cols=40 Identities=10% Similarity=0.195 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKE 416 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~ 416 (453)
+.|+.+++.|+.....|...+..+++++..+..+.+++..
T Consensus 91 ~~l~~r~~~l~~~~~~l~~~l~~l~~~i~~~~~~l~~~~~ 130 (133)
T 1fxk_C 91 ESIKSQKNELESTLQKMGENLRAITDIMMKLSPQAEELLA 130 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 5566666666666666666666666666665555555543
No 277
>3sja_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.00A {Saccharomyces cerevisiae} PDB: 3sjc_C
Probab=38.23 E-value=72 Score=25.30 Aligned_cols=43 Identities=23% Similarity=0.273 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 378 ELAQRADALKEENASLR-----SEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr-----~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
.|..++..|..|+.... .+-..|+.++.+|..|...|...|..
T Consensus 10 ~l~~E~~~lk~E~~stSaQDeFAKWaKL~Rk~DKl~~ele~l~~~l~~ 57 (65)
T 3sja_C 10 AKVKERHELKEFNNSISAQDNYAKWTKNNRKLDSLDKEINNLKDEIQS 57 (65)
T ss_dssp HHHHHHHHHHHHHTTSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 33444444444444322 22456777788888888888777754
No 278
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=38.10 E-value=75 Score=33.78 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=23.3
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 355 QRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYE 405 (453)
Q Consensus 355 eRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~ 405 (453)
..|.++--+.|+..=++| +.+++.+-+.+++||..+++++...+.+++
T Consensus 18 larvqkana~aka~Ye~~---~ae~~a~n~~i~aeNeaikkrNa~aka~Ye 65 (497)
T 3iox_A 18 LARVQKANADAKAAYEAA---VAANNAANAALTAENTAIKKRNADAKADYE 65 (497)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444443333222 344455555556666666666655554444
No 279
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=37.93 E-value=38 Score=26.99 Aligned_cols=46 Identities=13% Similarity=0.151 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
.+.+++..+++.|+.|-.-.-.+|..+..-|+..+.++..|..+|.
T Consensus 16 ~Ekdna~e~~e~lE~ERdFYf~KLRdiE~l~q~~e~e~~~l~~~I~ 61 (75)
T 3mtu_A 16 LDKENALDRAEQAEADKDFYFGKLRNIELICQENEGENDPVLQRIV 61 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 3556666677777776666555666666666666666555554444
No 280
>4ani_A Protein GRPE; chaperone cycle, complementary assay; 4.09A {Geobacillus kaustophilus}
Probab=37.87 E-value=56 Score=30.93 Aligned_cols=30 Identities=17% Similarity=0.171 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee 403 (453)
+++++|..++..|.++...++++..+=+++
T Consensus 73 ~e~~el~d~~lR~~AEfeN~RkR~~rE~e~ 102 (213)
T 4ani_A 73 AKLSEMEHRYLRLYADFENFRRRTRQEMEA 102 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445566666666666666666555544433
No 281
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=37.86 E-value=43 Score=34.14 Aligned_cols=42 Identities=14% Similarity=0.271 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Q 036551 384 DALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQE 425 (453)
Q Consensus 384 e~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~~ 425 (453)
+.|.++-..|+.++..|.++...++.+...+...|-++-..+
T Consensus 71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ipN~~~~~ 112 (425)
T 2dq3_A 71 TEIQNRVKELKEEIDRLEEELRKVEEELKNTLLWIPNLPHPS 112 (425)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 445555566666666666666667777766666676665543
No 282
>2efr_A General control protein GCN4 and tropomyosin 1 Al; destabilizing cluster, hydrophobic core, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2efs_A 2d3e_A
Probab=37.73 E-value=1.7e+02 Score=26.41 Aligned_cols=31 Identities=16% Similarity=0.269 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 380 AQRADALKEENASLRSEVTRIRNEYEQLLAE 410 (453)
Q Consensus 380 E~rVe~Le~EN~~Lr~el~~Lkee~~~L~sE 410 (453)
+..|..|+.++..|..++..-+.++..+..+
T Consensus 97 ERsv~kLEk~id~lEd~L~~~Kek~~~i~~e 127 (155)
T 2efr_A 97 ERSVTKLEKSIDDLEDELYAQKLKYKAISEE 127 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344444444444333333333333333
No 283
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=37.70 E-value=79 Score=25.75 Aligned_cols=26 Identities=15% Similarity=0.172 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 396 EVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 396 el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
.+.....+...+..+...|+.++..+
T Consensus 65 ~i~~~~~~l~~l~~~i~~l~~~i~~l 90 (112)
T 1l8d_A 65 LLSKYHLDLNNSKNTLAKLIDRKSEL 90 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555556666666666555544
No 284
>2zxx_A Geminin; coiled-coil, cell cycle, coiled coil, DNA replication inhibitor, phosphoprotein, DNA-binding, nucleus, proto-oncogene; HET: DNA; 2.80A {Mus musculus}
Probab=37.53 E-value=1.6e+02 Score=24.16 Aligned_cols=24 Identities=25% Similarity=0.350 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRI 400 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~L 400 (453)
+.|..+|+.++.|...|+.++..|
T Consensus 37 ~~Lh~~ie~~~eEi~~LkeEN~~L 60 (79)
T 2zxx_A 37 EKLHKEIEQKDSEIARLRKENKDL 60 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555555555544
No 285
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=37.47 E-value=66 Score=31.06 Aligned_cols=35 Identities=11% Similarity=0.090 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEYEQLLAE 410 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sE 410 (453)
+++++..++.+..+...|..++..|+++..+|..+
T Consensus 94 ~~~~e~~~~~l~~~~~~l~~~~~~L~~~~~~l~~~ 128 (357)
T 3rrk_A 94 LEEAEAVLRPVASRAEVLGKERAALEEEIQTIELF 128 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 45555556666666666666666666666666655
No 286
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=37.36 E-value=51 Score=30.93 Aligned_cols=28 Identities=14% Similarity=0.164 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
...=.++.+|+++|..|.+|+++|.++.
T Consensus 157 ~~~L~~i~~L~a~N~hLqkENeRL~~e~ 184 (186)
T 3q4f_C 157 CYCLDTIAENQAKNEHLQKENERLLRDW 184 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3334556677777777777766666554
No 287
>2r2v_A GCN4 leucine zipper; coiled coils, anti-parallel tetramer, protein design, de novo protein; HET: CIT; 1.90A {Saccharomyces cerevisiae} SCOP: h.1.3.1
Probab=37.28 E-value=67 Score=22.65 Aligned_cols=28 Identities=14% Similarity=0.211 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
+|..+++.|-.+...|+.|...|++-|.
T Consensus 5 QledKvEel~~~~~~l~nEv~Rl~~lLg 32 (34)
T 2r2v_A 5 QVADKLEEVASKLYHNANELARVAKLLG 32 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 3455555566666667777777776654
No 288
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=37.22 E-value=39 Score=32.60 Aligned_cols=38 Identities=16% Similarity=0.185 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASL 414 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~L 414 (453)
+++|+++..|+....++....+....+..+++...+.|
T Consensus 9 d~~EErIs~le~rleei~q~eq~~ekrik~ne~sL~dL 46 (233)
T 2yko_A 9 DQLEERVSAAEDEINEIKREGKFREKRIKRNEQSLQEI 46 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444443333333333333333333333
No 289
>1m1j_C Fibrinogen gamma chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_C
Probab=36.83 E-value=57 Score=33.57 Aligned_cols=52 Identities=17% Similarity=-0.003 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 371 RKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 371 RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
+=.+++..||..+...+.+...|+..+..++.+++.|..+..+|..++....
T Consensus 88 kml~~~~~~e~~~~~~~~~i~~l~~~~~~~~~~i~~l~~~i~~l~~~~~~~~ 139 (409)
T 1m1j_C 88 KIIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQLKQKIAQLESHCQEPC 139 (409)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCC
T ss_pred HHHHHHHHHHHHhcchHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhccc
Confidence 3445677778888888888888888888888888888888888877665543
No 290
>3sjb_C Golgi to ER traffic protein 1; coiled-coil, receptor complex, TA-protein biogenesis, GET PA hydrolase-transport protein complex; 3.30A {Saccharomyces cerevisiae}
Probab=36.35 E-value=35 Score=28.79 Aligned_cols=6 Identities=33% Similarity=0.008 Sum_probs=2.1
Q ss_pred HHHHHH
Q 036551 407 LLAENA 412 (453)
Q Consensus 407 L~sEN~ 412 (453)
|..|..
T Consensus 61 l~~ele 66 (93)
T 3sjb_C 61 LDKEIN 66 (93)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 333333
No 291
>4dzo_A Mitotic spindle assembly checkpoint protein MAD1; homodimer, kinetochore, mitosis, spindle checkpoint protein, nucleus, cell cycle; HET: MSE; 1.76A {Homo sapiens}
Probab=36.13 E-value=64 Score=27.96 Aligned_cols=30 Identities=20% Similarity=0.263 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee 403 (453)
+++.+|+.+|+.++..|+.|++-...-..+
T Consensus 4 ~e~~~l~~qi~~~ekr~~RLKevF~~ks~e 33 (123)
T 4dzo_A 4 KEVAELKKQVESAELKNQRLKEVFQTKIQE 33 (123)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467777777777777777777655554333
No 292
>1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A
Probab=35.70 E-value=77 Score=32.26 Aligned_cols=51 Identities=14% Similarity=0.185 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 371 RKQAECDELAQRADALKE--------ENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 371 RKqaelEeLE~rVe~Le~--------EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
.-+.++++|+.+.+.+.+ +...|..+...|++++..|+.+...|.++|..+
T Consensus 39 ~~~~~~~~l~~~~n~~sk~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (421)
T 1ses_A 39 ELKKRLQEVQTERNQVAKRVPKAPPEEKEALIARGKALGEEAKRLEEALREKEARLEAL 97 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444443 235677777778888888887777777777654
No 293
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=35.52 E-value=31 Score=29.03 Aligned_cols=19 Identities=26% Similarity=0.476 Sum_probs=7.7
Q ss_pred HHHHHHHHHHHHHHhcCCC
Q 036551 405 EQLLAENASLKERLGEIPV 423 (453)
Q Consensus 405 ~~L~sEN~~Lr~qL~~L~g 423 (453)
..|+.|...|+++|..+++
T Consensus 17 ~~l~~~i~~lkeel~~L~~ 35 (109)
T 2wg5_A 17 EELLSKNYHLENEVARLRS 35 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 3333334444444444433
No 294
>3s4r_A Vimentin; alpha-helix, cytoskeleton, intermediate filament, structural; 2.45A {Homo sapiens} PDB: 3ssu_A
Probab=35.04 E-value=1.9e+02 Score=23.75 Aligned_cols=27 Identities=26% Similarity=0.394 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 389 ENASLRSEVTRIRNEYEQLLAENASLK 415 (453)
Q Consensus 389 EN~~Lr~el~~Lkee~~~L~sEN~~Lr 415 (453)
+...|+.+|..+..+...|..|...|.
T Consensus 57 ~i~~Lr~~i~~~~~ek~~l~~e~dnl~ 83 (93)
T 3s4r_A 57 EMRELRRQVDQLTNDKARVEVERDNLA 83 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333333333333333333333333
No 295
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=34.92 E-value=1e+02 Score=30.70 Aligned_cols=20 Identities=20% Similarity=0.230 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASL 393 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~L 393 (453)
+++++|+++++.|+.+...|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~ 266 (426)
T 1lrz_A 247 EYIKELNEERDILNKDLNKA 266 (426)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 45566666666666665555
No 296
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=34.43 E-value=2.7e+02 Score=26.05 Aligned_cols=26 Identities=12% Similarity=0.055 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 396 EVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 396 el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
++...+.++..++.+...++.+|...
T Consensus 122 ~~~~~~a~l~~~~a~l~~a~a~l~~a 147 (341)
T 3fpp_A 122 EMAVKQAQIGTIDAQIKRNQASLDTA 147 (341)
T ss_dssp HHHHTHHHHHHHHHHHHHTHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444455555555443
No 297
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=34.27 E-value=42 Score=34.37 Aligned_cols=42 Identities=14% Similarity=0.124 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
.+++++.++..+......|..+... |..+...|++++..+..
T Consensus 26 ~i~~~~~~~~~~~~~~~~l~~~~~~-------l~~~~~~~~~e~~~l~~ 67 (405)
T 4b4t_J 26 KIQETELKIRSKTENVRRLEAQRNA-------LNDKVRFIKDELRLLQE 67 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHhcC
Confidence 4445555555444444444444444 33444444555554444
No 298
>1m1j_B Fibrinogen beta chain; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: d.171.1.1 h.1.8.1 PDB: 1ei3_B*
Probab=34.15 E-value=2.9e+02 Score=29.00 Aligned_cols=26 Identities=15% Similarity=0.240 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 393 LRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 393 Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
|+..+..|++++..|+.....+.+.+
T Consensus 173 L~~~~~~l~~ki~~l~~~~~~~~~~~ 198 (464)
T 1m1j_B 173 LRAVIDSLHKKIQKLENAIATQTDYC 198 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44444455555555555555444443
No 299
>3hhm_B NISH2 P85alpha; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_B 2rd0_B 4a55_B* 3mtt_A
Probab=33.86 E-value=86 Score=31.68 Aligned_cols=48 Identities=19% Similarity=0.328 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
-.+.|..++++|...-..|..++....+.+..|+.+...|+-.|..|+
T Consensus 206 n~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~lkp~l~ql~ 253 (373)
T 3hhm_B 206 NYDKLKSRISEIIDSRRRLEEDLKKQAAEYREIDKRMNSIKPDLIQLR 253 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHH
Confidence 344555566655555555555555555555555555555555554443
No 300
>3ghg_C Fibrinogen gamma chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 1deq_C
Probab=33.72 E-value=40 Score=34.87 Aligned_cols=47 Identities=11% Similarity=-0.029 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
.++++.|+.-+...+.....|+..+.....++..|+.....|..++.
T Consensus 90 l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~i~~L~~~v~~l~~~~~ 136 (411)
T 3ghg_C 90 LEEIMKYEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQLEAQCQ 136 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34444445555555555556666655555555555555555555443
No 301
>4a3a_A Amphiphysin; structural genomics, invagination, knobs-IN-holes, curvature membrane, structural genomics consortium; 1.78A {Homo sapiens} PDB: 4atm_A 3sog_A
Probab=33.68 E-value=1.1e+02 Score=28.72 Aligned_cols=50 Identities=24% Similarity=0.412 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 369 RLRKQAECDELAQRADALK-------EENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 369 R~RKqaelEeLE~rVe~Le-------~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
|.+|+--.+....+++.|. ........+++..++.++.| |..|+++|-.+
T Consensus 139 R~~KllDYD~~~~k~~kL~~K~~kd~~kl~kae~el~~Ak~~Ye~l---N~~L~eELP~l 195 (243)
T 4a3a_A 139 RSRKLVDYDSARHHLEALQSSKRKDESRISKAEEEFQKAQKVFEEF---NVDLQEELPSL 195 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred hcchHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
No 302
>3viq_B Mating-type switching protein SWI5; recombination activator; 2.20A {Schizosaccharomyces pombe} PDB: 3vir_A*
Probab=33.23 E-value=2e+02 Score=23.83 Aligned_cols=24 Identities=21% Similarity=0.383 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRI 400 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~L 400 (453)
+.|+.+++.|+.+...|..++..+
T Consensus 4 ~~L~~~i~~L~~q~~~L~~ei~~~ 27 (85)
T 3viq_B 4 SQLESRVHLLEQQKEQLESSLQDA 27 (85)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555554444444444444
No 303
>2gkw_A TNF receptor-associated factor 3; CD40, NF-KB signaling, BAFF receptor, TRAF3, apoptosis; 2.70A {Homo sapiens} PDB: 1kzz_A 1l0a_A 1zms_A 1rf3_A
Probab=32.76 E-value=67 Score=28.69 Aligned_cols=33 Identities=6% Similarity=0.026 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLA 409 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~s 409 (453)
+.||+++..++.....+..++..|+++.+.|+.
T Consensus 3 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 35 (192)
T 2gkw_A 3 GLLESQLSRHDQMLSVHDIRLADMDLRFQVLET 35 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 456666666666666666666665555555554
No 304
>2no2_A HIP-I, huntingtin-interacting protein 1; clathrin light chain binding, HIP1 coiled-coil domain, endocytosis, clathrin SELF-assembly, cell adhesion; 2.80A {Homo sapiens}
Probab=32.72 E-value=2.2e+02 Score=23.96 Aligned_cols=35 Identities=20% Similarity=0.271 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 385 ALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 385 ~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
.|+.+...=..+|..|++.+..+..++..|..+|.
T Consensus 58 ~lk~eL~~~~~el~~lq~~l~~~~~~~~~l~~~~~ 92 (107)
T 2no2_A 58 SLKQELATSQRELQVLQGSLETSAQSEANWAAEFA 92 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333444444444445555555544443
No 305
>2lf0_A Uncharacterized protein YIBL; two-domain protein, structural genomics, PSI-biology, protei structure initiative; NMR {Shigella flexneri}
Probab=32.65 E-value=64 Score=28.44 Aligned_cols=13 Identities=31% Similarity=0.406 Sum_probs=6.1
Q ss_pred HHHHHHHHhHHHH
Q 036551 353 KRQRRKQSNRESA 365 (453)
Q Consensus 353 KReRRKqsNRESA 365 (453)
|.+-..++||.=+
T Consensus 9 K~Eiq~L~drLD~ 21 (123)
T 2lf0_A 9 KNEIKRLSDRLDA 21 (123)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3344445555544
No 306
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=32.33 E-value=69 Score=32.76 Aligned_cols=25 Identities=20% Similarity=0.379 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 380 AQRADALKEENASLRSEVTRIRNEY 404 (453)
Q Consensus 380 E~rVe~Le~EN~~Lr~el~~Lkee~ 404 (453)
++.+..|+.+...|..++..+++++
T Consensus 38 ~~~~~~l~~~~~~l~~~~~~~~~e~ 62 (405)
T 4b4t_J 38 TENVRRLEAQRNALNDKVRFIKDEL 62 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555566666666554443
No 307
>3rrk_A V-type ATPase 116 kDa subunit; alpha beta fold, proton pump, subunit I/A, V-ATPase, proton; HET: NHE; 2.64A {Meiothermus ruber}
Probab=31.98 E-value=1.3e+02 Score=29.00 Aligned_cols=19 Identities=21% Similarity=0.191 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRS 395 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~ 395 (453)
++|+.+++.++++...+..
T Consensus 236 ~~l~~~l~~~~~~l~~~~~ 254 (357)
T 3rrk_A 236 RLAPEELVGIREEVARLSR 254 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3333333333333333333
No 308
>3vlc_E Golgi to ER traffic protein 1; ATPase, membrane protein insertion, ATP binding, membrane PR binding; HET: ADP; 4.50A {Saccharomyces cerevisiae}
Probab=31.93 E-value=24 Score=29.78 Aligned_cols=25 Identities=20% Similarity=0.203 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 397 VTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 397 l~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
-..|+.++++|..|...|+..|...
T Consensus 58 WAKL~Rk~DKl~~ele~l~~~L~s~ 82 (94)
T 3vlc_E 58 WTKNNRKLDSLDKEINNLKDEIQSE 82 (94)
T ss_dssp HHHHHHHHHHHHHHTTTHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666666666666666665543
No 309
>2w6b_A RHO guanine nucleotide exchange factor 7; X-RAY crystallography, phosphoprotein, guanine-nucleotide releasing factor, GIT, PAK, PIX, COOL; 2.80A {Rattus norvegicus}
Probab=31.78 E-value=1.8e+02 Score=22.51 Aligned_cols=22 Identities=14% Similarity=0.432 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q 036551 378 ELAQRADALKEENASLRSEVTR 399 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~ 399 (453)
.|..+|.+|++||..|..-++.
T Consensus 14 aLkDqV~eL~qe~k~m~k~lEe 35 (56)
T 2w6b_A 14 ALKDEVQELRQDNKKMKKSLEE 35 (56)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4566666777777666665554
No 310
>4e61_A Protein BIM1; EB1-like motif, coiled-coil, spindle orientation, mitosis, K phosphorylation, mitotic spindle, microtubules, cell cycle; 2.45A {Saccharomyces cerevisiae}
Probab=31.73 E-value=1.8e+02 Score=25.00 Aligned_cols=23 Identities=17% Similarity=0.290 Sum_probs=9.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 036551 379 LAQRADALKEENASLRSEVTRIR 401 (453)
Q Consensus 379 LE~rVe~Le~EN~~Lr~el~~Lk 401 (453)
+..+++.|..+...|+..+..|.
T Consensus 16 ~~~ei~~L~~ei~eLk~~ve~lE 38 (106)
T 4e61_A 16 SQETIGSLNEEIEQYKGTVSTLE 38 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444444443333
No 311
>2b9c_A Striated-muscle alpha tropomyosin; alpha-helix, coiled coil, alanine, axial stagger, radius, SIDE-chain packing, crystal packing; 2.30A {Rattus norvegicus} SCOP: h.1.5.1
Probab=31.59 E-value=2.7e+02 Score=24.61 Aligned_cols=75 Identities=12% Similarity=0.172 Sum_probs=46.3
Q ss_pred HHHHHHHhHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 354 RQRRKQSNRESARRSRLRKQ---------------AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 354 ReRRKqsNRESARRSR~RKq---------------aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
|.++.+-||.-+---|.... ...++...++..++.+......+......+|..|..+...+-..|
T Consensus 38 R~~k~lE~r~~~deEr~~~lE~qLkeak~~aeeadrKyeE~~RKl~~~E~dLeraeeRae~aE~k~~eLEeeL~~~~~nl 117 (147)
T 2b9c_A 38 RGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEELKTVTNNL 117 (147)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555666665554443322 234556666667777777767777777777777777777777777
Q ss_pred hcCCCccccc
Q 036551 419 GEIPVQEDER 428 (453)
Q Consensus 419 ~~L~g~~~is 428 (453)
..|...+...
T Consensus 118 KsLE~~eeka 127 (147)
T 2b9c_A 118 KSLEDKVEEL 127 (147)
T ss_dssp HHHHHTTTTH
T ss_pred HhhHHhHHHH
Confidence 6665554433
No 312
>2wg5_A General control protein GCN4, proteasome-activating nucleotidase; transcription hydrolase complex, nucleotide-binding; 2.10A {Saccharomyces cerevisiae} PDB: 2wg6_A
Probab=31.55 E-value=33 Score=28.91 Aligned_cols=21 Identities=24% Similarity=0.257 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 036551 396 EVTRIRNEYEQLLAENASLKE 416 (453)
Q Consensus 396 el~~Lkee~~~L~sEN~~Lr~ 416 (453)
++..|++++..|+.|+..|++
T Consensus 15 ~~~~l~~~i~~lkeel~~L~~ 35 (109)
T 2wg5_A 15 KVEELLSKNYHLENEVARLRS 35 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHhC
Confidence 333334444445555555553
No 313
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=31.51 E-value=2.5e+02 Score=24.11 Aligned_cols=18 Identities=33% Similarity=0.388 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLR 394 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr 394 (453)
++|+++++.|+.....|.
T Consensus 91 ~~l~~~i~~L~~~~~~L~ 108 (142)
T 3gp4_A 91 IELKNRIDVMQEALDRLD 108 (142)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333333333333333
No 314
>2q6q_A Spindle POLE BODY component SPC42; SPC42P, budding yeast, cell cycle; 1.97A {Saccharomyces cerevisiae}
Probab=31.35 E-value=2e+02 Score=23.25 Aligned_cols=44 Identities=16% Similarity=0.198 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
.+|..++..-+.|...|..-+..|+.++.+-..=|..|..++..
T Consensus 6 KeL~~kl~~Kq~EI~rLnvlvgslR~KLiKYtelnKKLe~~~~~ 49 (74)
T 2q6q_A 6 KELNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLN 49 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666666666666666666666666666666665533
No 315
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=31.28 E-value=2.8e+02 Score=26.06 Aligned_cols=36 Identities=17% Similarity=0.244 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 349 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAD 384 (453)
Q Consensus 349 ErElKReRRKqsNRESARRSR~RKqaelEeLE~rVe 384 (453)
++...+..+.+..|+-|-+...++++.++.|..++.
T Consensus 99 ~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~ 134 (235)
T 2odv_A 99 EKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQ 134 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777777888888888888888888887766554
No 316
>1gk4_A Vimentin; intermediate filament, dimer, parallel coiled coil, heptad repeat, stutter; 2.3A {Homo sapiens} SCOP: h.1.20.1
Probab=31.23 E-value=2e+02 Score=22.92 Aligned_cols=48 Identities=25% Similarity=0.159 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 372 KQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 372 KqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
-+..+..|+.++..++.+-.....+.+.|-.-...|..|....|.-|.
T Consensus 31 ~q~~i~~lE~eL~~~r~e~~~q~~EYq~LlnvK~~Ld~EIatYRkLLE 78 (84)
T 1gk4_A 31 YQDTIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLE 78 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHc
Confidence 355667777777777777777777777777777777777777776654
No 317
>2i1j_A Moesin; FERM, coiled-coil, C-ermad, ERM, radixin, ezrin, MER actin binding, masking, regulation, SELF-inhibition, cell A membrane protein; 2.10A {Spodoptera frugiperda} PDB: 2i1k_A 1e5w_A
Probab=30.99 E-value=46 Score=35.26 Aligned_cols=42 Identities=14% Similarity=0.179 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKE 416 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~ 416 (453)
+.++|+.++..++.+......+|..-.+....|..+.+...+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~e~~~~~~~ 377 (575)
T 2i1j_A 336 KQQEYQDRLRQMQEEMERSQANLLEAQDMILRLEEQLRQLQA 377 (575)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 356777777777777777666666555544444444444433
No 318
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=30.76 E-value=1.1e+02 Score=24.52 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENAS------LRSEVTRIRNEYEQLLAENASLKER 417 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~------Lr~el~~Lkee~~~L~sEN~~Lr~q 417 (453)
..|+.|+.+++.|+.+... =..++..|..++..+..+...+.++
T Consensus 29 ~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~er 78 (89)
T 2lw1_A 29 QLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFER 78 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666666666665432 1234445555555555555544443
No 319
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=30.58 E-value=4.1e+02 Score=26.37 Aligned_cols=64 Identities=17% Similarity=0.113 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 036551 363 ESARRSRLRKQAECDELAQRADALKE---------------ENASLRSEVTRIRNEYEQLLAENASLKERLGEIPVQED 426 (453)
Q Consensus 363 ESARRSR~RKqaelEeLE~rVe~Le~---------------EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g~~~ 426 (453)
+-+++.=..|+++++.|+..++.-+. -.++++.++..|+-.-.+|.++-..|+..|..+-+.+-
T Consensus 319 ~~~~~~~~~k~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~ 397 (406)
T 4dyl_A 319 AVATEMVFRRQEMVTQLQQELRNEEENTHPRERVQLLGKRQVLQEALQGLQVALCSQAKLQAQQELLQTKLEHLGPGEP 397 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchHHHHHhHHhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 34455556677888888877654422 23456666777777778889999999999999877554
No 320
>1zxa_A CGMP-dependent protein kinase 1, alpha isozyme; parallel coiled coil dimer, transferase; NMR {Homo sapiens}
Probab=30.58 E-value=68 Score=25.49 Aligned_cols=11 Identities=18% Similarity=0.290 Sum_probs=4.1
Q ss_pred HHHHHHHHHHH
Q 036551 382 RADALKEENAS 392 (453)
Q Consensus 382 rVe~Le~EN~~ 392 (453)
++.+|+.++..
T Consensus 26 ~I~eLE~~L~~ 36 (67)
T 1zxa_A 26 RIKELEKRLSE 36 (67)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333333333
No 321
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=30.37 E-value=50 Score=33.96 Aligned_cols=29 Identities=10% Similarity=0.264 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 387 KEENASLRSEVTRIRNEYEQLLAENASLK 415 (453)
Q Consensus 387 e~EN~~Lr~el~~Lkee~~~L~sEN~~Lr 415 (453)
+.+...++.++..|+++...++.|...|+
T Consensus 71 e~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 99 (437)
T 4b4t_L 71 DDQLKQRRQNIRDLEKLYDKTENDIKALQ 99 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 33333444444455555555555554444
No 322
>2j5u_A MREC protein; bacterial cell shape determining protein MREC, cell shape regulation; 2.5A {Listeria monocytogenes}
Probab=30.34 E-value=24 Score=33.60 Aligned_cols=15 Identities=33% Similarity=0.510 Sum_probs=6.3
Q ss_pred HHHHHHHHHHHHHHH
Q 036551 381 QRADALKEENASLRS 395 (453)
Q Consensus 381 ~rVe~Le~EN~~Lr~ 395 (453)
.++++|+.||..|++
T Consensus 43 ~~~~~l~~En~rLr~ 57 (255)
T 2j5u_A 43 SEVADLKKENKDLKE 57 (255)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 334444444444443
No 323
>2ve7_A Kinetochore protein HEC1, kinetochore protein SPC; mitosis, centromere, cell cycle, microtubule, C division, calponin homology; 2.88A {Homo sapiens} PDB: 3iz0_C*
Probab=30.11 E-value=86 Score=30.77 Aligned_cols=31 Identities=23% Similarity=0.278 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNE 403 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee 403 (453)
.++++.|+.+.+.|+.|.+.|..+...+++.
T Consensus 184 ~~eie~L~~~~~~L~eEi~~Le~~~e~~~k~ 214 (315)
T 2ve7_A 184 AFKLESLEAKNRALNEQIARLEQERSTANKA 214 (315)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 4577777777777777777777766665553
No 324
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=29.34 E-value=76 Score=26.98 Aligned_cols=10 Identities=20% Similarity=0.189 Sum_probs=3.6
Q ss_pred HHHHHHHHHH
Q 036551 377 DELAQRADAL 386 (453)
Q Consensus 377 EeLE~rVe~L 386 (453)
+.|..+++.|
T Consensus 99 ~~L~~~i~~L 108 (117)
T 3kin_B 99 KALKSVIQHL 108 (117)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3333333333
No 325
>3ra3_A P1C; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=29.24 E-value=27 Score=23.26 Aligned_cols=21 Identities=24% Similarity=0.442 Sum_probs=8.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 036551 380 AQRADALKEENASLRSEVTRI 400 (453)
Q Consensus 380 E~rVe~Le~EN~~Lr~el~~L 400 (453)
|-+-+.|++....|+.++..|
T Consensus 6 efendaleqkiaalkqkiasl 26 (28)
T 3ra3_A 6 EFENDALEQKIAALKQKIASL 26 (28)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HhccHHHHHHHHHHHHHHHHh
Confidence 333334444444444444433
No 326
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.14 E-value=54 Score=33.71 Aligned_cols=31 Identities=6% Similarity=0.118 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~ 422 (453)
.|..++..++++...|..+...++++|..+.
T Consensus 69 ~~e~~~~~~~~~~~~l~~~~~~~~~~~~~l~ 99 (437)
T 4b4t_L 69 RYDDQLKQRRQNIRDLEKLYDKTENDIKALQ 99 (437)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4445555555555555555555555555543
No 327
>3zwh_Q Myosin-9; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} PDB: 2lnk_C
Probab=29.08 E-value=21 Score=26.48 Aligned_cols=21 Identities=33% Similarity=0.544 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRS 395 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~ 395 (453)
+||+++++.+.++.+++.|+.
T Consensus 7 ELeEa~Erae~ae~~vnkLR~ 27 (45)
T 3zwh_Q 7 ELEDATETADAMNREVSSLKN 27 (45)
T ss_dssp HHHHHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 445555555554444444443
No 328
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=28.87 E-value=99 Score=25.49 Aligned_cols=38 Identities=18% Similarity=0.167 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
-+|+..|+++++.+..+... ...|+..|..|.-+|.+|
T Consensus 38 vdYI~~Lq~e~~r~~e~e~r-----------~k~le~~n~~l~~riqEL 75 (83)
T 4ath_A 38 VDYIRKLQREQQRAKDLENR-----------QKKLEHANRHLLLRVQEL 75 (83)
T ss_dssp HHHHHHHHHTHHHHHHHHHH-----------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-----------HHHhhhhhHHHHHHHHHH
Confidence 56766666555544433332 334566666666655554
No 329
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=28.80 E-value=1.1e+02 Score=22.39 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 378 ELAQRADALKEENASLRSEVTRIRNEYEQLL 408 (453)
Q Consensus 378 eLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~ 408 (453)
+|-++++...+|...-+++|..|+.+...|+
T Consensus 6 ~l~qkI~kVdrEI~Kte~kI~~lqkKlkeLe 36 (42)
T 2l5g_B 6 ELIQNMDRVDREITMVEQQISKLKKKQQQLE 36 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555555555555555555444444443
No 330
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=28.73 E-value=33 Score=29.38 Aligned_cols=17 Identities=12% Similarity=0.061 Sum_probs=9.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEE 389 (453)
Q Consensus 373 qaelEeLE~rVe~Le~E 389 (453)
-+|+..|+.+++.|+.+
T Consensus 73 ieYIk~Lq~~~~~l~~~ 89 (118)
T 4ati_A 73 VDYIRKLQREQQRAKDL 89 (118)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 35666666666666543
No 331
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=28.18 E-value=1e+02 Score=28.97 Aligned_cols=25 Identities=20% Similarity=0.225 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLRSEV 397 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el 397 (453)
-..+.+|+.+...|++||+.|..+-
T Consensus 160 L~~i~~L~a~N~hLqkENeRL~~e~ 184 (186)
T 3q4f_C 160 LDTIAENQAKNEHLQKENERLLRDW 184 (186)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3456777777777888888777653
No 332
>3k29_A Putative uncharacterized protein; YSCO, type III secretion apparatus, S genomics, csgid; HET: MSE; 2.00A {Chlamydia trachomatis}
Probab=27.87 E-value=3.6e+02 Score=24.86 Aligned_cols=18 Identities=33% Similarity=0.392 Sum_probs=8.8
Q ss_pred HHHHHHHHHHhHHHHHHH
Q 036551 351 ELKRQRRKQSNRESARRS 368 (453)
Q Consensus 351 ElKReRRKqsNRESARRS 368 (453)
.+.+++-+++.++++|--
T Consensus 31 ~le~ek~~l~~~e~~r~k 48 (169)
T 3k29_A 31 LLELEQEKLRERESERDK 48 (169)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 344444555555555543
No 333
>3n7n_E Monopolin complex subunit LRS4; meiosis, rDNA, replication; 3.90A {Saccharomyces cerevisiae}
Probab=27.69 E-value=13 Score=31.58 Aligned_cols=31 Identities=16% Similarity=0.325 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 386 LKEENASLRSEVTRIRNEYEQLLAENASLKE 416 (453)
Q Consensus 386 Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~ 416 (453)
+..|.-.|+.++..|..+++.+..||..||+
T Consensus 41 ~~~Etl~LQrQv~qLt~~lQ~~~~Ene~Lke 71 (95)
T 3n7n_E 41 VVDETLFLQRQIAQLNKQLQLSFQENEKLLS 71 (95)
T ss_dssp -------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445555566666666666666666666554
No 334
>3ljm_A Coil Ser L9C; de novo design, three stranded coiled coil, APO, de novo Pro; 1.36A {Synthetic} PDB: 2jgo_A 1cos_A 3h5g_A 3h5f_A 3pbj_A 2x6p_C 1coi_A
Probab=27.68 E-value=98 Score=20.98 Aligned_cols=18 Identities=17% Similarity=0.279 Sum_probs=7.1
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 036551 402 NEYEQLLAENASLKERLG 419 (453)
Q Consensus 402 ee~~~L~sEN~~Lr~qL~ 419 (453)
.+|..|++....|..+|.
T Consensus 8 kkcaalesklqalekkle 25 (31)
T 3ljm_A 8 KKCAALESKLQALEKKLE 25 (31)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333334444444433333
No 335
>2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus}
Probab=27.51 E-value=42 Score=34.16 Aligned_cols=30 Identities=20% Similarity=0.387 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
.|..+...|++++..|+.+...|.++|..+
T Consensus 72 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (425)
T 2dq3_A 72 EIQNRVKELKEEIDRLEEELRKVEEELKNT 101 (425)
T ss_dssp TSTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777777777777777777666554
No 336
>2yo3_A General control protein GCN4, putative inner MEMB protein, general control protein...; HANS motif, YADA-like head, ylhead; 2.00A {Saccharomyces cerevisiae}
Probab=26.86 E-value=1.6e+02 Score=28.91 Aligned_cols=55 Identities=9% Similarity=0.177 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 366 RRSRLRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 366 RRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
......-...+.+|..+|..++.+-..+.+.++.+.+.+..|+.|...++..|+.
T Consensus 208 ~~an~yTd~k~~~l~n~I~~V~n~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (268)
T 2yo3_A 208 EEANTYTDQKMGEMNSKIKGVENKMKQIEDKIEEILSKIYHIENEIARIKKLIKL 262 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 3444556677888999999999999999999999999999999988888765543
No 337
>1j1d_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.2
Probab=26.51 E-value=1.7e+02 Score=25.89 Aligned_cols=25 Identities=16% Similarity=0.250 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCc
Q 036551 400 IRNEYEQLLAENASLKERLGEIPVQ 424 (453)
Q Consensus 400 Lkee~~~L~sEN~~Lr~qL~~L~g~ 424 (453)
|..+...-.-|...|+.++.++.|+
T Consensus 84 lE~kvkkq~yEI~dL~~rV~Dl~gK 108 (133)
T 1j1d_C 84 IEAKVTKNITEIADLTQKIFDLRGK 108 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHcchHHHHHHHHHHHHHcc
Confidence 3333444555667777777777664
No 338
>2l5g_A GPS2 protein, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=26.20 E-value=97 Score=22.28 Aligned_cols=19 Identities=21% Similarity=0.305 Sum_probs=8.1
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 036551 389 ENASLRSEVTRIRNEYEQL 407 (453)
Q Consensus 389 EN~~Lr~el~~Lkee~~~L 407 (453)
+.+.|..++..|+++.++|
T Consensus 16 Qi~~l~~kl~~LkeEKHQL 34 (38)
T 2l5g_A 16 QILKLEEKLLALQEEKHQL 34 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444433
No 339
>3vmx_A Voltage-gated hydrogen channel 1; coiled-coil, ION channel, ION transport, membrane protein; 1.45A {Mus musculus}
Probab=25.76 E-value=2.1e+02 Score=21.47 Aligned_cols=26 Identities=19% Similarity=0.238 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRIR 401 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lk 401 (453)
.+.|.++|.+|+..+..+..|+.+|+
T Consensus 13 n~~L~~kv~~Le~~c~~~eQEieRL~ 38 (48)
T 3vmx_A 13 NIQLATKIQHLEFSCSEKEQEIERLN 38 (48)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 36677777777777777777766654
No 340
>3k66_A Beta-amyloid-like protein; X-RAY amyloid precursor protein, heparin binding, alternative splicing, developmental protein, differentiation; 2.70A {Caenorhabditis elegans} PDB: 3k6b_A*
Probab=25.76 E-value=2.7e+02 Score=27.03 Aligned_cols=54 Identities=15% Similarity=0.286 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHHH----HHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Q 036551 373 QAECDELAQRADALKEENA----SLRSE-VTRIRNEYEQLLAENASLKERLGEIPVQED 426 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~----~Lr~e-l~~Lkee~~~L~sEN~~Lr~qL~~L~g~~~ 426 (453)
..+.++++.+++.|..-+- .++.+ ++..++.+..|+.|+..-+++|.+.+.+..
T Consensus 37 MkEW~Eae~q~k~l~kaDpk~Ae~~k~~m~~rFQ~~v~sLEqE~a~ErqqL~etH~qRV 95 (239)
T 3k66_A 37 MKEWGDLETRYNEQKAKDPKGAEKFKSQMNARFQKTVSSLEEEHKRMRKEIEAVHEERV 95 (239)
T ss_dssp HHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 4566788888888876652 23333 344666777888888888888887766544
No 341
>3u0c_A Invasin IPAB, 62 kDa antigen; translocator, type three secretion system, coiled-coil, VIRU cell invasion; 2.05A {Shigella flexneri} PDB: 3gz1_P
Probab=25.73 E-value=4.1e+02 Score=24.80 Aligned_cols=79 Identities=15% Similarity=0.235 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 346 LQDERELKRQRRKQSNRESARRSRLRKQAEC-DELAQRADALKEENASLRSE---VTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 346 l~DErElKReRRKqsNRESARRSR~RKqael-EeLE~rVe~Le~EN~~Lr~e---l~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
+.++.-.-+..-++-|+.+.+.-|..|-.++ +....-+++-+.-+..++.. +......++.|+.....+..+|..|
T Consensus 64 IlG~~SlTqL~nrL~~wlsQ~em~~qks~EFSD~~qTaL~eAQ~AtD~y~~Ainny~~Ads~~~~lekKvn~aq~kLs~L 143 (201)
T 3u0c_A 64 ILGEKSLTALTNKITAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQIQTRLSEL 143 (201)
T ss_dssp HHCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3455555555666677777777777776666 11122222223333333333 3345677888888888888888888
Q ss_pred CCc
Q 036551 422 PVQ 424 (453)
Q Consensus 422 ~g~ 424 (453)
...
T Consensus 144 ~P~ 146 (201)
T 3u0c_A 144 DPE 146 (201)
T ss_dssp CSS
T ss_pred CCC
Confidence 654
No 342
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=25.69 E-value=1.5e+02 Score=24.95 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRSEVTRIRNEYEQLLA 409 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~s 409 (453)
+..|+.+++.|+.+-+.|-..+..+++++..|..
T Consensus 8 ~~~Lk~El~~L~~~E~~LD~~i~~~~~~l~~lte 41 (106)
T 2aze_B 8 LEGLTQDLRQLQESEQQLDHLMNICTTQLRLLSE 41 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3455555666666666666666665555555554
No 343
>1zme_C Proline utilization transcription activator; complex (transcription regulation/DNA), PUT3, Zn2Cys6, binuclear cluster; HET: DNA 5IU; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 1ajy_A
Probab=25.40 E-value=79 Score=23.29 Aligned_cols=11 Identities=36% Similarity=0.259 Sum_probs=4.2
Q ss_pred HHHHHHHHHHH
Q 036551 407 LLAENASLKER 417 (453)
Q Consensus 407 L~sEN~~Lr~q 417 (453)
|+.++..|+..
T Consensus 56 Le~~l~~l~~~ 66 (70)
T 1zme_C 56 KTEENNRLKAL 66 (70)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 33333334333
No 344
>2xus_A Breast cancer metastasis-suppressor 1; protein binding; 1.912A {Homo sapiens}
Probab=25.33 E-value=2e+02 Score=21.65 Aligned_cols=39 Identities=18% Similarity=0.267 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 370 LRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASL 414 (453)
Q Consensus 370 ~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~L 414 (453)
.||.+.+++| ..|+.+...|+.++ .++++.+|..+..+|
T Consensus 6 rrr~e~ld~l----~~LEkqF~~LkEql--Y~ERl~ql~~~Leel 44 (49)
T 2xus_A 6 RRRSECVSEM----LDLEKQFSELKEKL--FRERLSQLRLRLEEV 44 (49)
T ss_dssp HHHHHHHHHH----HHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH----HHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 3445555544 45666666666654 234444444444444
No 345
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=24.98 E-value=88 Score=22.87 Aligned_cols=20 Identities=10% Similarity=0.416 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 036551 381 QRADALKEENASLRSEVTRI 400 (453)
Q Consensus 381 ~rVe~Le~EN~~Lr~el~~L 400 (453)
.+-+.|++....|..++..|
T Consensus 16 ~r~e~LE~Ri~~LE~KLd~L 35 (43)
T 2pnv_A 16 ERSEDFEKRIVTLETKLETL 35 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHHHHHHH
Confidence 33333333333333333333
No 346
>2ocy_A RAB guanine nucleotide exchange factor SEC2; RAB, GEF, guanine exchange factor, coiled-coil, endocytosis/exocytosis complex; 3.30A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=24.76 E-value=3.9e+02 Score=24.15 Aligned_cols=61 Identities=16% Similarity=0.189 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHH--------HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 361 NRESARRSRLRKQAECDELAQ--------RAD-------ALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 361 NRESARRSR~RKqaelEeLE~--------rVe-------~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
-|..|-..+.+=..++|+|.. -|. .++..|..|+.++..-...+..|..+...|+.-+..+
T Consensus 73 ~R~~aE~~~~~ie~ElEeLTasLFeEAN~MVa~ar~~~~~~e~r~~~L~~ql~e~~~~l~~lq~ql~~LK~v~~~m 148 (154)
T 2ocy_A 73 LRTKAEEEADKLNKEVEDLTASLFDEANNMVADARKEKYAIEILNKRLTEQLREKDTLLDTLTLQLKNLKKVMHSL 148 (154)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444455555566666643 122 2334444444444444444445555555555444433
No 347
>1hwt_C Protein (heme activator protein); transcription factor, asymmetry, GAL4, complex activator/DNA, gene regulation/DNA complex; HET: DNA; 2.50A {Saccharomyces cerevisiae} SCOP: g.38.1.1 h.1.3.1 PDB: 2hap_C* 1qp9_A* 1pyc_A
Probab=24.65 E-value=39 Score=25.72 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=14.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 036551 372 KQAECDELAQRADALKEENASLR 394 (453)
Q Consensus 372 KqaelEeLE~rVe~Le~EN~~Lr 394 (453)
+..+++.|+.+|..||.....|.
T Consensus 56 ~~~~~~~L~~ri~~LE~~l~~l~ 78 (81)
T 1hwt_C 56 KDNELKKLRERVKSLEKTLSKVH 78 (81)
T ss_dssp HHHHHHHHHHHHHHHHTTC----
T ss_pred hHHHHHHHHHHHHHHHHHHHHhc
Confidence 45678888888888876655543
No 348
>3thf_A Protein shroom; coiled-coil, anti-parallel, helical, RHO-kinase, actin-bindi protein binding, cytoskeleton regulator; 2.70A {Drosophila melanogaster}
Probab=24.61 E-value=1.3e+02 Score=28.21 Aligned_cols=31 Identities=19% Similarity=0.295 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 369 RLRKQAECDELAQRADALKEENASLRSEVTR 399 (453)
Q Consensus 369 R~RKqaelEeLE~rVe~Le~EN~~Lr~el~~ 399 (453)
+.||.+-++.|..++..|+.|-..|..++..
T Consensus 14 ~~Kk~ELi~~L~~kL~~L~~eqe~l~ee~~~ 44 (190)
T 3thf_A 14 KQKMDELIKHLNQKIVSLKREQQTISEECSA 44 (190)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4677777888888888888888888777665
No 349
>1x8y_A Lamin A/C; structural protein, intermediate filament protein; 2.20A {Homo sapiens} SCOP: h.1.20.1 PDB: 3v5b_A 3v4w_A 3v4q_A
Probab=24.47 E-value=2.7e+02 Score=22.29 Aligned_cols=50 Identities=10% Similarity=-0.009 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 370 LRKQAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 370 ~RKqaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
..-+..+..|+.++..++.+-.....+.+.|-.-...|..|....|.-|.
T Consensus 31 ~~~q~~i~~lE~el~~~r~e~~~ql~EYq~LlnvK~~Le~EIatYRkLLE 80 (86)
T 1x8y_A 31 DTSRRLLAEKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLE 80 (86)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHc
Confidence 34456778888888888888888888888888888888888888876664
No 350
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=24.35 E-value=1.6e+02 Score=24.91 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
.+|+.+++.|+.|...|.. +..+...|+.+-..|..+|..+
T Consensus 50 ~eL~~EI~~L~~eI~~LE~----iqs~aK~LRnKA~~L~~eLe~F 90 (96)
T 1t3j_A 50 KHLEEEIARLSKEIDQLEK----MQNNSKLLRNKAVQLESELENF 90 (96)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHhHHHHHHHHHHHHHHHHH
No 351
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=24.27 E-value=1.2e+02 Score=28.14 Aligned_cols=31 Identities=19% Similarity=0.377 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 368 SRLRKQAECDELAQRADALKEENASLRSEVT 398 (453)
Q Consensus 368 SR~RKqaelEeLE~rVe~Le~EN~~Lr~el~ 398 (453)
+-.+-+.+++.||.++...+.++..+..++.
T Consensus 136 tV~kLqkeiD~LEDeL~~eKek~k~i~~eLD 166 (175)
T 3mud_A 136 TTAKNEKSIDDLEEKVAHAKEENLNMHQMLD 166 (175)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555566555555555555555543
No 352
>2e7s_A RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 3.00A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=24.24 E-value=63 Score=28.85 Aligned_cols=20 Identities=30% Similarity=0.164 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q 036551 402 NEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 402 ee~~~L~sEN~~Lr~qL~~L 421 (453)
.+.+.++..|..|+.+|.+.
T Consensus 96 ~~~~~~e~r~~~L~~ql~e~ 115 (135)
T 2e7s_A 96 MEKYAIEILNKRLTEQLREK 115 (135)
T ss_dssp HHHHHHHHHHHHHHHTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 44556666666666666543
No 353
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=24.04 E-value=1.6e+02 Score=22.77 Aligned_cols=10 Identities=20% Similarity=0.318 Sum_probs=4.0
Q ss_pred HHHHHHHHHH
Q 036551 377 DELAQRADAL 386 (453)
Q Consensus 377 EeLE~rVe~L 386 (453)
..|...++.|
T Consensus 32 ~~L~~~~~~l 41 (98)
T 3gwk_C 32 NLLTQEQAVI 41 (98)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3344444443
No 354
>3ni0_A Bone marrow stromal antigen 2; coiled-coil, antiviral defense, immune system, GPI anchor; 1.60A {Mus musculus}
Probab=23.84 E-value=2.9e+02 Score=23.53 Aligned_cols=20 Identities=20% Similarity=0.310 Sum_probs=11.2
Q ss_pred HHHHHHHHHHHHHHHHhcCC
Q 036551 403 EYEQLLAENASLKERLGEIP 422 (453)
Q Consensus 403 e~~~L~sEN~~Lr~qL~~L~ 422 (453)
++++|+.|...|+++|.+..
T Consensus 68 ~v~elqgEI~~Lnq~Lqda~ 87 (99)
T 3ni0_A 68 RIKELENEVTKLNQELENLR 87 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 35555666666666655543
No 355
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=23.76 E-value=17 Score=34.95 Aligned_cols=11 Identities=36% Similarity=0.507 Sum_probs=5.4
Q ss_pred hhhccccccee
Q 036551 15 RRRLMKTTTVV 25 (453)
Q Consensus 15 ~~~~~~~~~~~ 25 (453)
++|+.|+..++
T Consensus 256 ~~k~~~~l~~i 266 (448)
T 2z73_A 256 EMRLAKISIVI 266 (448)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44555554433
No 356
>3p7i_A PHND, subunit of alkylphosphonate ABC transporter; phosphonate binding protein, transport protein; 1.71A {Escherichia coli UTI89} PDB: 3qk6_A 3quj_A* 3s4u_A
Probab=23.69 E-value=78 Score=30.26 Aligned_cols=48 Identities=21% Similarity=0.222 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 348 DERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRS 395 (453)
Q Consensus 348 DErElKReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~ 395 (453)
.-|++.+.+.+++-+..+..+..-|++.+.+|+.++..|+.....|..
T Consensus 265 ~ir~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (321)
T 3p7i_A 265 PIRQLALFKEMQSVKDNKGLNEQDKLAKTTAIQAQLDDLDRLNNALSA 312 (321)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345555555555555555556666777777777777777766555443
No 357
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface adhesin WALL, peptidoglycan-anchor, cell adhesion; HET: PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Probab=23.65 E-value=2.5e+02 Score=29.81 Aligned_cols=29 Identities=17% Similarity=0.259 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 036551 392 SLRSEVTRIRNEYEQLLAENASLKERLGE 420 (453)
Q Consensus 392 ~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~ 420 (453)
...+++..-..++..-+.+.......|.+
T Consensus 77 kY~~~~AeY~~kl~aYe~~~~~~~k~lae 105 (497)
T 3iox_A 77 KYQKDLADYPVKLKAYEDEQTSIKAALAE 105 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333444444444444444444555553
No 358
>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A* 1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1* 2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1* 1fif_A 1fih_A*
Probab=23.61 E-value=88 Score=25.96 Aligned_cols=20 Identities=10% Similarity=0.114 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 036551 376 CDELAQRADALKEENASLRS 395 (453)
Q Consensus 376 lEeLE~rVe~Le~EN~~Lr~ 395 (453)
+..|+.+++.|+.+...|..
T Consensus 6 l~~l~~~~~~l~~~l~~l~~ 25 (149)
T 1rtm_1 6 LANMEAEINTLKSKLELTNK 25 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 44455555555544444443
No 359
>1a93_A Coiled coil, LZ, MYC proto-oncogene protein; leucine zipper, 2D solution structure, H-bonds, buried salt bridge, proto-oncogene, nuclear protein; NMR {Homo sapiens} SCOP: h.1.3.1 PDB: 2a93_A
Probab=23.26 E-value=1.3e+02 Score=21.12 Aligned_cols=25 Identities=20% Similarity=0.327 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 397 VTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 397 l~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
-..|..+.++|...|..|+.+|..+
T Consensus 9 E~kLl~ekE~l~~r~eqL~~kLe~L 33 (34)
T 1a93_A 9 EQKLISEEDLLRKRREQLKHKLEQL 33 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3334444445555566666665543
No 360
>2p22_A Suppressor protein STP22 of temperature- sensitive alpha-factor receptor and arginine...; endosome, trafficking complex, VPS23, VPS28, VPS37, MVB12; 2.70A {Saccharomyces cerevisiae} PDB: 2caz_A
Probab=22.98 E-value=3.2e+02 Score=25.11 Aligned_cols=37 Identities=14% Similarity=0.291 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 379 LAQRADALKEENASLRSEVTRIRNEYEQLLAENASLK 415 (453)
Q Consensus 379 LE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr 415 (453)
|..-...|+.+...|..+...|..++..|..+...+.
T Consensus 54 l~~g~~~L~~~~~~Le~~~~~L~~~i~~l~~~~~k~~ 90 (174)
T 2p22_A 54 IAIDKNHLRAVEQAIEQTMHSLNAQIDVLTANRAKVQ 90 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444444444444444444444444444343333
No 361
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=22.78 E-value=2.4e+02 Score=21.84 Aligned_cols=12 Identities=25% Similarity=0.338 Sum_probs=5.1
Q ss_pred HHHHHHHHHHHH
Q 036551 407 LLAENASLKERL 418 (453)
Q Consensus 407 L~sEN~~Lr~qL 418 (453)
++.|...|.++|
T Consensus 53 veeevkkleeei 64 (67)
T 1lq7_A 53 VEEEVKKLEEEI 64 (67)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 344444444444
No 362
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=22.61 E-value=2.3e+02 Score=26.24 Aligned_cols=50 Identities=26% Similarity=0.377 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 369 RLRKQAECDELAQRADAL-------KEENASLRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 369 R~RKqaelEeLE~rVe~L-------e~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
|.+|.--++....+++.| .........++...++.++.| |..|+++|-.+
T Consensus 134 R~~kllDyd~~~~~~~kl~~k~~kd~~kl~kae~el~~a~~~ye~l---N~~L~~eLP~l 190 (237)
T 4avm_A 134 RGRKLVDYDSARHHLEAVQNAKKKDEAKTAKAEEEFNKAQTVFEDL---NQELLEELPIL 190 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
No 363
>1uix_A RHO-associated kinase; coiled-coil, transferase; HET: MSE; 1.80A {Bos taurus} SCOP: h.1.27.1
Probab=22.52 E-value=3e+02 Score=22.06 Aligned_cols=24 Identities=13% Similarity=0.286 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 382 RADALKEENASLRSEVTRIRNEYE 405 (453)
Q Consensus 382 rVe~Le~EN~~Lr~el~~Lkee~~ 405 (453)
.|+.|..|+..|..++..+.+++.
T Consensus 5 ~v~~l~~E~eel~~klk~~~ee~~ 28 (71)
T 1uix_A 5 DVANLANEKEELNNKLKEAQEQLS 28 (71)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444444444333333
No 364
>1ytz_T Troponin T; muscle, THIN filament, actin binding, calcium, contractIle protein; HET: DR6; 3.00A {Gallus gallus} SCOP: h.1.25.1 PDB: 1yv0_T 2w49_1 2w4u_1
Probab=22.43 E-value=2.2e+02 Score=24.21 Aligned_cols=42 Identities=17% Similarity=0.159 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASL 414 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~L 414 (453)
++.|.+|..++..|+.|-=.|..++..-.-++..|......|
T Consensus 48 ~e~~keLh~~I~~lEeEKYDlE~kv~kq~yEI~eL~~rV~dl 89 (107)
T 1ytz_T 48 RDKAKELWDWLYQLQTEKYDFAEQIKRKKYEIVTLRNRIDQA 89 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHh
Confidence 456677777777777777777777776666777776666666
No 365
>3swy_A Cyclic nucleotide-gated cation channel alpha-3; coiled-coil, assembly domain, transport protein; 1.90A {Homo sapiens}
Probab=22.38 E-value=2.3e+02 Score=20.98 Aligned_cols=25 Identities=24% Similarity=0.327 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALKEENASLRSEVTR 399 (453)
Q Consensus 375 elEeLE~rVe~Le~EN~~Lr~el~~ 399 (453)
.++.|+.-++.|+..-..|..|+..
T Consensus 6 kv~~Le~~ld~LqTr~ArLlae~~s 30 (46)
T 3swy_A 6 KVEQLGSSLDTLQTRFARLLAEYNA 30 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555555443
No 366
>1j1d_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 2.61A {Homo sapiens} SCOP: h.1.25.2
Probab=22.32 E-value=2e+02 Score=25.45 Aligned_cols=46 Identities=24% Similarity=0.325 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 373 QAECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERL 418 (453)
Q Consensus 373 qaelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL 418 (453)
++.|.+|..++..|+.|-=.|..++..-.-++..|......|+.+.
T Consensus 64 ~e~~keLh~~I~~LEeEKYDlE~kvkkq~yEI~dL~~rV~Dl~gKf 109 (133)
T 1j1d_C 64 QDLARQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDLRGKF 109 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHcchHHHHHHHHHHHHHccc
Confidence 5677888888888888888888888888888888888888887643
No 367
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=22.02 E-value=2.3e+02 Score=27.33 Aligned_cols=29 Identities=10% Similarity=0.186 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYE 405 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~ 405 (453)
.+|+.+++++.+..+....++..+.+.+.
T Consensus 16 s~le~rleei~q~eq~~ekrik~ne~sL~ 44 (233)
T 2yko_A 16 SAAEDEINEIKREGKFREKRIKRNEQSLQ 44 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444444444444443333333
No 368
>3okq_A BUD site selection protein 6; coiled-coil, protein binding; 2.04A {Saccharomyces cerevisiae} PDB: 3onx_A
Probab=21.85 E-value=4.4e+02 Score=23.66 Aligned_cols=36 Identities=22% Similarity=0.284 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 361 NRESARRSRLRKQAECDELAQRADALKEENASLRSE 396 (453)
Q Consensus 361 NRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~e 396 (453)
||.---.++.+=-...+.|=.+|+.|+.-...|+..
T Consensus 8 ~R~y~~~~k~kL~~~sd~LvtkVDDLQD~VE~LRkD 43 (141)
T 3okq_A 8 NRMYMEKSQTELGDLSDTLLSKVDDLQDVIEIMRKD 43 (141)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHhHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 333333444444444555555555555555555443
No 369
>2aze_B Transcription factor E2F1; coiled coil, beta sandwich, cell cycle, transcription; 2.55A {Homo sapiens} SCOP: e.63.1.2
Probab=21.67 E-value=1.5e+02 Score=25.04 Aligned_cols=28 Identities=7% Similarity=0.118 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIR 401 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lk 401 (453)
++++.|+.+=+.|-.....++..+..|.
T Consensus 13 ~El~~L~~~E~~LD~~i~~~~~~l~~lt 40 (106)
T 2aze_B 13 QDLRQLQESEQQLDHLMNICTTQLRLLS 40 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344444444444444444444444444
No 370
>3e98_A GAF domain of unknown function; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 2.43A {Pseudomonas aeruginosa}
Probab=21.60 E-value=1.3e+02 Score=28.54 Aligned_cols=31 Identities=23% Similarity=0.219 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Q 036551 375 ECDELAQRADALK---EENASLRSEVTRIRNEYE 405 (453)
Q Consensus 375 elEeLE~rVe~Le---~EN~~Lr~el~~Lkee~~ 405 (453)
++++||.++..|- .+|..+..++..|..+..
T Consensus 80 r~~~Le~~L~~Li~~A~~Ne~l~~~~~~l~l~LL 113 (252)
T 3e98_A 80 RNIEMRHRLSQLMDVARENDRLFDKTRRLVLDLL 113 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3456666665544 577777777777766544
No 371
>4aj5_1 SKA3, spindle and kinetochore-associated protein 3; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=21.54 E-value=3.8e+02 Score=22.87 Aligned_cols=64 Identities=17% Similarity=0.116 Sum_probs=39.7
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Q 036551 348 DERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRSEV-------TRIRNEYEQLLAENAS 413 (453)
Q Consensus 348 DErElKReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~el-------~~Lkee~~~L~sEN~~ 413 (453)
=|+|-.|..|.+...+|--. .+=-.-+-+|..+|..|+.+.+.+..+. ......|.-|+..|..
T Consensus 18 Le~Eta~L~~al~~edsd~E--~~~~rilhdl~seV~~LK~dv~~~L~k~~~e~qe~~~FIKa~kvL~~rns~ 88 (101)
T 4aj5_1 18 LDCETARLQRALDGEESDFE--DYPMRILYDLHSEVQTLKDDINILLDKARLENQEGIDFIKATKVLMEKNSM 88 (101)
T ss_dssp HHHHHHHHHHHHHTCSSHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhHH
Confidence 37777777787777666543 3445566788888888877776665443 3334445555555543
No 372
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=21.36 E-value=2.8e+02 Score=23.75 Aligned_cols=33 Identities=12% Similarity=0.178 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQLLA 409 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~s 409 (453)
+-|+.+++.|+.+...|...+..|...+...+.
T Consensus 84 ~~L~~~~~~l~~~i~~L~~~~~~L~~~i~~~~~ 116 (142)
T 3gp4_A 84 ELLKKQRIELKNRIDVMQEALDRLDFKIDNYDT 116 (142)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555555555555555555544444433
No 373
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=21.30 E-value=1.5e+02 Score=21.04 Aligned_cols=18 Identities=22% Similarity=0.362 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 036551 381 QRADALKEENASLRSEVT 398 (453)
Q Consensus 381 ~rVe~Le~EN~~Lr~el~ 398 (453)
.+|..|+.+|..|..++.
T Consensus 20 dkVR~LE~~N~~Le~~i~ 37 (39)
T 1gk7_A 20 DKVRFLEQQNKILLAELE 37 (39)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456666666666666554
No 374
>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=21.14 E-value=1.9e+02 Score=22.78 Aligned_cols=34 Identities=18% Similarity=0.248 Sum_probs=26.0
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 353 KRQRRKQSNRESARRSRLRKQAECDELAQRADAL 386 (453)
Q Consensus 353 KReRRKqsNRESARRSR~RKqaelEeLE~rVe~L 386 (453)
|+.+|+...-++.|+-|.|=...+++|..-|-..
T Consensus 5 k~~~rR~~H~~~ERrRR~rIN~~l~eL~~LvP~~ 38 (73)
T 4h10_A 5 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTC 38 (73)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHH
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHcccc
Confidence 4456667777888888888888899988877754
No 375
>4fla_A Regulation of nuclear PRE-mRNA domain-containing 1B; structural genomics consortium, SGC, transcription; 2.20A {Homo sapiens}
Probab=21.10 E-value=2.8e+02 Score=24.74 Aligned_cols=16 Identities=13% Similarity=0.210 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHHhc
Q 036551 405 EQLLAENASLKERLGE 420 (453)
Q Consensus 405 ~~L~sEN~~Lr~qL~~ 420 (453)
.++..-..+|+..+..
T Consensus 131 ~rv~~vkkeL~~hi~s 146 (152)
T 4fla_A 131 ARVTQVRKELKSHIQS 146 (152)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhc
Confidence 3333333444444433
No 376
>2l5g_B Putative uncharacterized protein NCOR2, G protein pathway suppressor 2; GPS2, SMRT, TBL1, CO-repressor, transcription regulator; NMR {Homo sapiens}
Probab=21.05 E-value=1.3e+02 Score=22.16 Aligned_cols=29 Identities=17% Similarity=0.298 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 036551 393 LRSEVTRIRNEYEQLLAENASLKERLGEI 421 (453)
Q Consensus 393 Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L 421 (453)
|...+..+-.++++.+.+...|+.++..|
T Consensus 7 l~qkI~kVdrEI~Kte~kI~~lqkKlkeL 35 (42)
T 2l5g_B 7 LIQNMDRVDREITMVEQQISKLKKKQQQL 35 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555555555555544
No 377
>1fzc_C Fibrin; blood coagulation, plasma protein, crosslinking; HET: NAG MAN; 2.30A {Homo sapiens} SCOP: d.171.1.1 h.1.8.1 PDB: 1fzb_C* 1fza_C* 1fze_C* 1fzf_C* 1fzg_C* 2xnx_C 2xny_C 3e1i_C* 2hlo_C* 1n8e_C 1n86_C* 2q9i_C* 2z4e_C* 2h43_C* 2hod_C* 2hpc_C* 3h32_C* 1re3_C* 1ltj_C* 1lt9_C* ...
Probab=20.95 E-value=35 Score=34.08 Aligned_cols=15 Identities=13% Similarity=0.341 Sum_probs=5.7
Q ss_pred HHHHHHHHHHHHHHH
Q 036551 393 LRSEVTRIRNEYEQL 407 (453)
Q Consensus 393 Lr~el~~Lkee~~~L 407 (453)
|..+|+.|++++..|
T Consensus 30 ~~~ki~~L~~~i~~l 44 (319)
T 1fzc_C 30 NNQKIVNLKEKVAQL 44 (319)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 333333333333333
No 378
>4ad8_A DNA repair protein RECN; DNA binding protein, ATPase domain; HET: DNA; 4.00A {Deinococcus radiodurans}
Probab=20.90 E-value=2.9e+02 Score=27.97 Aligned_cols=13 Identities=31% Similarity=0.572 Sum_probs=10.3
Q ss_pred cccccccCCCCCCC
Q 036551 194 LNMITGKNNDLGKA 207 (453)
Q Consensus 194 l~m~~Gk~~~~gk~ 207 (453)
+++++|.|+. ||+
T Consensus 62 ~n~i~G~NGa-GKS 74 (517)
T 4ad8_A 62 FCAFTGETGA-GKS 74 (517)
T ss_dssp EEEEEESHHH-HHH
T ss_pred eEEEEcCCCC-CHH
Confidence 8999998876 664
No 379
>4i0x_B ESAT-6-like protein MAB_3113; structural genomics, PSI-2, protein structure initiative, in center for structure and function innovation; HET: BME GOL; 1.96A {Mycobacterium abscessus}
Probab=20.72 E-value=2.1e+02 Score=22.81 Aligned_cols=16 Identities=31% Similarity=0.455 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHH
Q 036551 374 AECDELAQRADALKEE 389 (453)
Q Consensus 374 aelEeLE~rVe~Le~E 389 (453)
..|++|+..|+.|...
T Consensus 32 ~~l~~L~~~v~~L~~~ 47 (103)
T 4i0x_B 32 ENLDQLESRAQKLVQS 47 (103)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcC
Confidence 4455555555555554
No 380
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=20.69 E-value=1.8e+02 Score=28.03 Aligned_cols=19 Identities=32% Similarity=0.324 Sum_probs=10.1
Q ss_pred HHHHHhHHHH-HHHHHHHHH
Q 036551 356 RRKQSNRESA-RRSRLRKQA 374 (453)
Q Consensus 356 RRKqsNRESA-RRSR~RKqa 374 (453)
-.-++|||.. +.+|.||+.
T Consensus 96 LK~IR~~E~svqp~R~~R~~ 115 (234)
T 3plt_A 96 LKSIRNIEASVQPSRDRKEK 115 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhHHHHHHHH
Confidence 3456677654 455555443
No 381
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=20.60 E-value=1.1e+02 Score=26.10 Aligned_cols=42 Identities=12% Similarity=0.163 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 378 ELAQRADALKEENASL---RSEVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 378 eLE~rVe~Le~EN~~L---r~el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
.|..+++.|+++...+ ..+++.|+.++..|.......+..+.
T Consensus 3 ~l~~~~~~l~~~~~~~~~l~~~~~~l~~~l~~~~~~l~~~~~~~~ 47 (182)
T 3kqg_A 3 TLNAQIPELKSDLEKASALNTKIRALQGSLENMSKLLKRQNDILQ 47 (182)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
No 382
>2xnx_M M protein, M1-BC1; cell adhesion, virulence factor, streptococcal toxic shock S; 3.30A {Streptococcus pyogenes}
Probab=20.58 E-value=3.7e+02 Score=24.26 Aligned_cols=76 Identities=18% Similarity=0.165 Sum_probs=0.0
Q ss_pred hhhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHH
Q 036551 346 LQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEEN------------ASLRSEVTRIRNEYEQLLAENAS 413 (453)
Q Consensus 346 l~DErElKReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN------------~~Lr~el~~Lkee~~~L~sEN~~ 413 (453)
+.+.++.-...+...++.-.+.-+.-..++...|+.+.+.++.-- ..|+..+...++....+..+...
T Consensus 12 ~~e~~~~l~~~~~~~~~~~~~a~~~~le~e~~kl~~e~~i~eas~~~~~~~~le~~~~~l~rdleasr~akk~~ea~la~ 91 (146)
T 2xnx_M 12 LEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKELEAITREQEINRNLLGNAKLELDQ 91 (146)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHTTTTTTHHHHHHTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHhhHHHHHHHHHHHHHHHHhHHHHHHH
Q ss_pred HHHHHhcC
Q 036551 414 LKERLGEI 421 (453)
Q Consensus 414 Lr~qL~~L 421 (453)
|+.++..+
T Consensus 92 l~~~~~~L 99 (146)
T 2xnx_M 92 LSSEKEQL 99 (146)
T ss_dssp HHHHHHHH
T ss_pred HHhhHHHH
No 383
>2k48_A Nucleoprotein; viral protein; NMR {Andes virus}
Probab=20.54 E-value=3.4e+02 Score=23.38 Aligned_cols=17 Identities=12% Similarity=0.456 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHHHHH
Q 036551 391 ASLRSEVTRIRNEYEQL 407 (453)
Q Consensus 391 ~~Lr~el~~Lkee~~~L 407 (453)
..|+.+|.+|+.++..+
T Consensus 85 salq~KiaeLKrqLAd~ 101 (107)
T 2k48_A 85 STLETKLGELKRQLADL 101 (107)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33444444444443333
No 384
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=20.31 E-value=2.2e+02 Score=21.71 Aligned_cols=24 Identities=13% Similarity=0.284 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Q 036551 396 EVTRIRNEYEQLLAENASLKERLG 419 (453)
Q Consensus 396 el~~Lkee~~~L~sEN~~Lr~qL~ 419 (453)
....+.....++......+...|.
T Consensus 57 ~~~~~~~~~~~~~~~L~~i~~~L~ 80 (99)
T 3zbh_A 57 QYQELRPSFEKMAVLLNEVGQQLH 80 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444444444444444444443
No 385
>1j1e_C Troponin I, TNI; THIN filament, muscle regulation, Ca2+ binding protein, EF- hand, coiled-coil, contractIle protein; 3.30A {Homo sapiens} SCOP: h.1.25.2
Probab=20.29 E-value=2.4e+02 Score=26.15 Aligned_cols=43 Identities=23% Similarity=0.347 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 036551 374 AECDELAQRADALKEENASLRSEVTRIRNEYEQLLAENASLKERLGEIPV 423 (453)
Q Consensus 374 aelEeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L~sEN~~Lr~qL~~L~g 423 (453)
+.|.+|..++..|+.|-=.|...+.. -.-|...|+.++.++.|
T Consensus 65 e~ckELh~~I~~LEeEKYDlE~kvkk-------qdyEI~dL~~rV~DLrG 107 (180)
T 1j1e_C 65 DLARQLHARVDKVDEERYDIEAKVTK-------NITEIADLTQKIFDLRG 107 (180)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHh-------cchhHHHHHHHHHHHHh
Confidence 33444444444444444444333333 34445555555555555
No 386
>3n5l_A Binding protein component of ABC phosphonate TRAN; structural genomics, joint center for structural genomics; HET: UNL; 1.97A {Pseudomonas aeruginosa}
Probab=20.26 E-value=1.1e+02 Score=28.67 Aligned_cols=47 Identities=17% Similarity=0.169 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 349 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRADALKEENASLRS 395 (453)
Q Consensus 349 ErElKReRRKqsNRESARRSR~RKqaelEeLE~rVe~Le~EN~~Lr~ 395 (453)
-|++...+.+++-+.-+.-+..-|++.+.+|+.++..|++....|..
T Consensus 257 ir~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (310)
T 3n5l_A 257 IRQLELFKQRTDVANNANLGAEEKAAKLKALDEELAKLEKRMAEREQ 303 (310)
T ss_dssp HHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455555555555555556666777777887777777766555443
No 387
>3vp9_A General transcriptional corepressor TUP1; four helix bundle; 1.80A {Saccharomyces cerevisiae} PDB: 3vp8_A
Probab=20.06 E-value=3.9e+02 Score=22.36 Aligned_cols=16 Identities=25% Similarity=0.015 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHhcCCC
Q 036551 408 LAENASLKERLGEIPV 423 (453)
Q Consensus 408 ~sEN~~Lr~qL~~L~g 423 (453)
+.|...||.+|....+
T Consensus 74 EeEI~rLr~eLe~r~~ 89 (92)
T 3vp9_A 74 EEEIKHLKLGLEQRDH 89 (92)
T ss_dssp HHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHcCC
Confidence 4577777777776443
No 388
>3tq2_A KE1; parallel three helix bundle, de novo protein; 1.10A {Synthetic}
Probab=20.04 E-value=2.3e+02 Score=19.74 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 036551 377 DELAQRADALKEENASLRSEVTRIRNEYEQL 407 (453)
Q Consensus 377 EeLE~rVe~Le~EN~~Lr~el~~Lkee~~~L 407 (453)
..|.++|..|+.+--.|.-++..|+++...|
T Consensus 4 salkekvsalkeqflmlmfkvsalkekvsal 34 (36)
T 3tq2_A 4 SALKEKVSALKEQFLMLMFKVSALKEKVSAL 34 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455666666666666666666666655443
Done!