BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036554
(105 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118484218|gb|ABK93989.1| unknown [Populus trichocarpa]
Length = 149
Score = 148 bits (373), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 71/103 (68%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
Query: 3 RGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV 62
R R F RFE + + G R N PPSRHLWVGNLSH+IEE +LTD+FL+FG+L+SV
Sbjct: 14 RDRFRREFTSSRFE--SSNSNGKRGNNPPSRHLWVGNLSHSIEETDLTDEFLQFGDLDSV 71
Query: 63 AFQPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
AFQPGRSYAF+NF EEDAIA++K+LQG+PLAGNPLRIEFAKA
Sbjct: 72 AFQPGRSYAFVNFNKEEDAIAAIKSLQGYPLAGNPLRIEFAKA 114
>gi|255567158|ref|XP_002524560.1| RNA binding protein, putative [Ricinus communis]
gi|223536113|gb|EEF37768.1| RNA binding protein, putative [Ricinus communis]
Length = 929
Score = 145 bits (367), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 87/114 (76%), Gaps = 9/114 (7%)
Query: 1 SGRGGGRERFR---------GGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTD 51
+ RGG R+R R RFED S ++ PPSRHLWVGNLSH+I E +LTD
Sbjct: 11 ASRGGSRDRVRRDFVSSTSNYSRFEDSNSSSNKRSSSNPPSRHLWVGNLSHSIMENDLTD 70
Query: 52 QFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
F+RFGEL+SVAFQPGRSYAFINFK +++AIA++KALQGFPLAGNPLRIEFAKA
Sbjct: 71 HFVRFGELDSVAFQPGRSYAFINFKNDDEAIAALKALQGFPLAGNPLRIEFAKA 124
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 31 PSRHLWVGNLSH-NIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PS LW+G + ++E L F FG++E + PGRSYAF+ F+ A + + LQ
Sbjct: 181 PSEVLWIGFPALLKVDEMILRKAFSPFGDIEKITVFPGRSYAFVRFRNVMSACRAKETLQ 240
Query: 90 GFPLAGNP-LRIEFAK 104
G L GNP + I FA+
Sbjct: 241 G-KLFGNPRVHICFAR 255
>gi|225447446|ref|XP_002266343.1| PREDICTED: uncharacterized protein LOC100249524 [Vitis vinifera]
Length = 953
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 86/104 (82%), Gaps = 6/104 (5%)
Query: 5 GGRERFR---GGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
G RERFR RFE+++HSG R++ PPSRHLWVGNLSH+I E LTD FL+FGEL++
Sbjct: 26 GARERFRRDYPPRFEEKSHSG---RSSHPPSRHLWVGNLSHSISENTLTDPFLQFGELDT 82
Query: 62 VAFQPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
VAFQPGRSYAFINFK EEDAI +M++LQGF +AG PL+IEFAKA
Sbjct: 83 VAFQPGRSYAFINFKQEEDAIHAMRSLQGFSVAGMPLKIEFAKA 126
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 31 PSRHLWVGNLSH-NIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P LW+G S ++E L F FGE+E + PGRSYAF+ F+ A + + LQ
Sbjct: 183 PCEVLWIGFPSLLKVDETILRKAFSPFGEIEKITSFPGRSYAFVQFRSVTAACRAKETLQ 242
Query: 90 GFPLAGNP-LRIEFAKA 105
G L GNP + I FAK+
Sbjct: 243 G-KLFGNPRVHICFAKS 258
>gi|296085076|emb|CBI28491.3| unnamed protein product [Vitis vinifera]
Length = 1054
Score = 144 bits (363), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 72/104 (69%), Positives = 86/104 (82%), Gaps = 6/104 (5%)
Query: 5 GGRERFR---GGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
G RERFR RFE+++HSG R++ PPSRHLWVGNLSH+I E LTD FL+FGEL++
Sbjct: 397 GARERFRRDYPPRFEEKSHSG---RSSHPPSRHLWVGNLSHSISENTLTDPFLQFGELDT 453
Query: 62 VAFQPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
VAFQPGRSYAFINFK EEDAI +M++LQGF +AG PL+IEFAKA
Sbjct: 454 VAFQPGRSYAFINFKQEEDAIHAMRSLQGFSVAGMPLKIEFAKA 497
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 52/118 (44%), Gaps = 16/118 (13%)
Query: 3 RGGGRERFRGGRFEDRTHSGGGGRANT-------------PPSRHLWVGNLSH-NIEEAN 48
R R RG F R G +T P LW+G S ++E
Sbjct: 513 RDEQRSTIRGSPFSQRDSRTRHGSPDTFYPDKSSISDRKGEPCEVLWIGFPSLLKVDETI 572
Query: 49 LTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLAGNP-LRIEFAKA 105
L F FGE+E + PGRSYAF+ F+ A + + LQG L GNP + I FAK+
Sbjct: 573 LRKAFSPFGEIEKITSFPGRSYAFVQFRSVTAACRAKETLQG-KLFGNPRVHICFAKS 629
>gi|224129262|ref|XP_002320541.1| predicted protein [Populus trichocarpa]
gi|222861314|gb|EEE98856.1| predicted protein [Populus trichocarpa]
Length = 827
Score = 142 bits (358), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 75/80 (93%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASM 85
R N PPSRHLWVGNLSH+IEE +LTD+FL+FG+L+SVAFQPGRSYAF+NF EEDAIA++
Sbjct: 1 RGNNPPSRHLWVGNLSHSIEETDLTDEFLQFGDLDSVAFQPGRSYAFVNFNKEEDAIAAI 60
Query: 86 KALQGFPLAGNPLRIEFAKA 105
K+LQG+PLAGNPLRIEFAKA
Sbjct: 61 KSLQGYPLAGNPLRIEFAKA 80
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 31 PSRHLWVGNLSH-NIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PS LW+G + ++E L F FGE+E + PGRSYAF+ F A + + LQ
Sbjct: 137 PSEVLWIGFPALLKVDEMILRKAFSPFGEIEKITVFPGRSYAFVRFTNLTSACRAKETLQ 196
Query: 90 GFPLAGNP-LRIEFAK 104
G L GNP + I FAK
Sbjct: 197 GK-LFGNPRVHICFAK 211
>gi|356549711|ref|XP_003543235.1| PREDICTED: uncharacterized protein LOC100816831 [Glycine max]
Length = 934
Score = 136 bits (342), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 67/99 (67%), Positives = 77/99 (77%), Gaps = 6/99 (6%)
Query: 13 GRFEDRTHSGGGGRAN------TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP 66
R +D +G GGR N PPSRHLWVGNLSHNI E L FLR+G LE+VAFQP
Sbjct: 17 SRCDDNRGNGVGGRDNRNSSRNNPPSRHLWVGNLSHNIVEEELAHHFLRYGPLENVAFQP 76
Query: 67 GRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
GRSYAFINF+++EDAI +++ALQGFPLAGNPLRIEFAKA
Sbjct: 77 GRSYAFINFRMDEDAIDALRALQGFPLAGNPLRIEFAKA 115
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 25 GRANTPPSRHLWVGNLSH-NIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIA 83
G N PS LW+G + +EE+ L F FGE+ + PGRSYAF+ F+ A +
Sbjct: 164 GDKNPEPSEVLWIGFPAQLKVEESILRKAFSPFGEIVKITTFPGRSYAFVRFRSLTSACS 223
Query: 84 SMKALQGFPLAGNP-LRIEFAKA 105
+ L+G L GNP + I FAK+
Sbjct: 224 ARDDLKG-KLFGNPRVHICFAKS 245
>gi|297790690|ref|XP_002863230.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297309064|gb|EFH39489.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 131 bits (330), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/81 (75%), Positives = 69/81 (85%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
GR PPSRHLWVGNL H I E L D+FLRFGELES+AFQPGRSYAF+NFK EDA A+
Sbjct: 6 GRGRNPPSRHLWVGNLPHGIPERELADRFLRFGELESLAFQPGRSYAFVNFKHNEDAFAA 65
Query: 85 MKALQGFPLAGNPLRIEFAKA 105
+++LQGFPL+GNPLRIEFAKA
Sbjct: 66 IESLQGFPLSGNPLRIEFAKA 86
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 28 NTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
N PS L++G S +++A L + F FGE+ V PGRSYAF+ F+ A + +
Sbjct: 137 NAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACKAKE 196
Query: 87 ALQGFPLAGNP-LRIEFAKA 105
LQG L GNP + I FAK+
Sbjct: 197 TLQG-KLFGNPRVHICFAKS 215
>gi|42566726|ref|NP_193001.2| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332657759|gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 823
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 69/81 (85%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
GR PPSRHLWVGNL H I E L D+FLRFGELES+AFQPGRSYAF+NF +EDA A+
Sbjct: 15 GRGRNPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAA 74
Query: 85 MKALQGFPLAGNPLRIEFAKA 105
+++LQGFPL+GNPLRIEFAKA
Sbjct: 75 IESLQGFPLSGNPLRIEFAKA 95
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 28 NTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
N PS L++G S +++A L + F FGE+ V PGRSYAF+ F+ A + +
Sbjct: 146 NAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACKAKE 205
Query: 87 ALQGFPLAGNP-LRIEFAKA 105
+LQG L GNP + I FAK+
Sbjct: 206 SLQG-KLFGNPRVHICFAKS 224
>gi|110738193|dbj|BAF01027.1| hypothetical protein [Arabidopsis thaliana]
Length = 823
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 69/81 (85%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
GR PPSRHLWVGNL H I E L D+FLRFGELES+AFQPGRSYAF+NF +EDA A+
Sbjct: 15 GRGRNPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAA 74
Query: 85 MKALQGFPLAGNPLRIEFAKA 105
+++LQGFPL+GNPLRIEFAKA
Sbjct: 75 IESLQGFPLSGNPLRIEFAKA 95
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 28 NTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
N PS L++G S +++A L + F FGE+ V PGRSYAF+ F+ A + +
Sbjct: 146 NAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACKAKE 205
Query: 87 ALQGFPLAGNP-LRIEFAKA 105
+LQG L GNP + I FAK+
Sbjct: 206 SLQG-KLFGNPRVHICFAKS 224
>gi|110739368|dbj|BAF01596.1| hypothetical protein [Arabidopsis thaliana]
Length = 823
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 69/81 (85%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
GR PPSRHLWVGNL H I E L D+FLRFGELES+AFQPGRSYAF+NF +EDA A+
Sbjct: 15 GRGRNPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAA 74
Query: 85 MKALQGFPLAGNPLRIEFAKA 105
+++LQGFPL+GNPLRIEFAKA
Sbjct: 75 IESLQGFPLSGNPLRIEFAKA 95
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 28 NTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
N PS L++G S +++A L + F FGE+ V PGRSYAF+ F+ A + +
Sbjct: 146 NAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACKAKE 205
Query: 87 ALQGFPLAGNP-LRIEFAKA 105
+LQG L GNP + I FAK+
Sbjct: 206 SLQG-KLFGNPRVHICFAKS 224
>gi|48310520|gb|AAT41832.1| At4g12630 [Arabidopsis thaliana]
Length = 117
Score = 128 bits (321), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/89 (68%), Positives = 71/89 (79%)
Query: 17 DRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFK 76
+R GR PPSRHLWVGNL H I E L D+FLRFGELES+AFQPGRSYAF+NF
Sbjct: 7 ERMMMKEDGRGRNPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFN 66
Query: 77 IEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+EDA A++++LQGFPL+GNPLRIEFAKA
Sbjct: 67 HDEDAFAAIESLQGFPLSGNPLRIEFAKA 95
>gi|449444608|ref|XP_004140066.1| PREDICTED: uncharacterized protein LOC101216073 [Cucumis sativus]
Length = 898
Score = 128 bits (321), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 83/109 (76%), Gaps = 5/109 (4%)
Query: 1 SGR-GGGRERFR---GGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRF 56
SGR GGR+R+R RF+++ SG +N PPSRHLWVGNL+H + E +L+ F +F
Sbjct: 2 SGRVDGGRDRYRKDYTSRFDEKPQSGHSNSSN-PPSRHLWVGNLAHVVVERDLSRYFSQF 60
Query: 57 GELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
GEL+S+AFQP RSYAF+NFK +EDA+A+M+ LQGF L GNP++IEF KA
Sbjct: 61 GELDSIAFQPSRSYAFVNFKRDEDAMAAMRELQGFSLGGNPIKIEFTKA 109
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 28 NTPPSRHLWVGNLSH-NIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
NT PS LW+G + ++E L F FGE++ + PGR+YAF+ F+ A + +
Sbjct: 158 NTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVTSAWRAKE 217
Query: 87 ALQGFPLAGNP-LRIEFAK 104
LQG L GNP + I FAK
Sbjct: 218 TLQG-KLFGNPRVHICFAK 235
>gi|449475881|ref|XP_004154577.1| PREDICTED: uncharacterized protein LOC101229209 [Cucumis sativus]
Length = 898
Score = 127 bits (320), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 63/109 (57%), Positives = 83/109 (76%), Gaps = 5/109 (4%)
Query: 1 SGR-GGGRERFR---GGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRF 56
SGR GGR+R+R RF+++ SG +N PPSRHLWVGNL+H + E +L+ F +F
Sbjct: 2 SGRVDGGRDRYRKDYTSRFDEKPQSGHSNSSN-PPSRHLWVGNLAHVVVERDLSRYFSQF 60
Query: 57 GELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
GEL+S+AFQP RSYAF+NFK +EDA+A+M+ LQGF L GNP++IEF KA
Sbjct: 61 GELDSIAFQPSRSYAFVNFKRDEDAMAAMRELQGFSLGGNPIKIEFTKA 109
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 28 NTPPSRHLWVGNLSH-NIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
NT PS LW+G + ++E L F FGE++ + PGR+YAF+ F+ A + +
Sbjct: 158 NTEPSEVLWIGFPALLKVDEMILRKAFSPFGEIDKITTFPGRTYAFVRFRGVTSAWRAKE 217
Query: 87 ALQGFPLAGNP-LRIEFAK 104
LQG L GNP + I FAK
Sbjct: 218 TLQG-KLFGNPRVHICFAK 235
>gi|5823574|emb|CAB53756.1| putative protein [Arabidopsis thaliana]
gi|7267965|emb|CAB78306.1| putative protein [Arabidopsis thaliana]
Length = 109
Score = 127 bits (319), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 69/81 (85%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
GR PPSRHLWVGNL H I E L D+FLRFGELES+AFQPGRSYAF+NF +EDA A+
Sbjct: 7 GRGRNPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAA 66
Query: 85 MKALQGFPLAGNPLRIEFAKA 105
+++LQGFPL+GNPLRIEFAKA
Sbjct: 67 IESLQGFPLSGNPLRIEFAKA 87
>gi|357462057|ref|XP_003601310.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355490358|gb|AES71561.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 180
Score = 125 bits (315), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/76 (77%), Positives = 66/76 (86%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PPSRHLWVGNLSHNI E L F+RFG LE VAFQPGRSYAFINF+++EDAI +M++LQ
Sbjct: 40 PPSRHLWVGNLSHNIVEDELAHPFIRFGPLEKVAFQPGRSYAFINFEVDEDAIDAMRSLQ 99
Query: 90 GFPLAGNPLRIEFAKA 105
GF LAGNPLRIEFAKA
Sbjct: 100 GFLLAGNPLRIEFAKA 115
>gi|356577389|ref|XP_003556809.1| PREDICTED: uncharacterized protein LOC100811668 [Glycine max]
Length = 925
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/72 (77%), Positives = 64/72 (88%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPL 93
HLWVGNLSHNI E L FLR+G LE+VAFQPGRSYAFINF+++EDAI +++ALQGFPL
Sbjct: 44 HLWVGNLSHNIVEEELAHHFLRYGPLENVAFQPGRSYAFINFRMDEDAIDALRALQGFPL 103
Query: 94 AGNPLRIEFAKA 105
AGNPLRIEFAKA
Sbjct: 104 AGNPLRIEFAKA 115
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 28 NTPPSRHLWVGNLSH-NIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
N PS LW+G + ++E+ L F FGE+ + PGRSYAF+ F+ A +
Sbjct: 167 NPEPSEVLWIGFPAQLKVDESILRKAFSPFGEIVKITTFPGRSYAFVRFRSLTSACRARD 226
Query: 87 ALQGFPLAGNP-LRIEFAKA 105
L+G L GNP + I FAK+
Sbjct: 227 DLKG-KLFGNPRVHICFAKS 245
>gi|148906028|gb|ABR16173.1| unknown [Picea sitchensis]
Length = 1019
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Query: 6 GRERFRGGRFEDRTHSGGGGRANTPP---SRHLWVGNLSHNIEEANLTDQFLRFGELESV 62
++R G RF++++H G + + SR+LWVGN+ N+ E L +QF RFGE+ES+
Sbjct: 21 AKDRVHGPRFDEKSHLFGAQKTESDTIQASRNLWVGNVYQNVTETALAEQFSRFGEIESI 80
Query: 63 AFQPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
R+YAFINF+ EEDA+ + ++LQG L+G LRIEFAK
Sbjct: 81 TVYSARNYAFINFRKEEDAVIAKRSLQGLVLSGLALRIEFAK 122
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 31 PSRHLWVGNLSH-NIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PS LW+G S+ I+E L +F FGE+E + PGR+YAF+ F A + +ALQ
Sbjct: 179 PSEVLWIGFPSYMEIDEMGLRKEFSPFGEIEHITTFPGRTYAFVQFCSVVAACRAKEALQ 238
Query: 90 GFPLAGNP-LRIEFAK 104
G L NP + I F+K
Sbjct: 239 G-KLFNNPRVNICFSK 253
>gi|218201874|gb|EEC84301.1| hypothetical protein OsI_30787 [Oryza sativa Indica Group]
Length = 1005
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%)
Query: 9 RFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR 68
RF R + G PPSRHLWVG+LS + A+L++ FLR G++E ++ PGR
Sbjct: 25 RFSAARDDPPPRRSSSGWGVAPPSRHLWVGSLSPGVAAADLSELFLRCGDVEGISRDPGR 84
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEF 102
S+AF+ F EEDA+A+++ LQG L G P+RIEF
Sbjct: 85 SFAFVTFAREEDAVAAVRELQGIHLRGAPIRIEF 118
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 31 PSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PS LW+G + ++EA L + F FGE+ + PGR+YAF+ + A + + LQ
Sbjct: 168 PSEVLWIGFPVGLKVDEATLWEAFSPFGEVVKITTFPGRTYAFVQYTTIAAACRAKETLQ 227
Query: 90 GFPLAGNP-LRIEFAKA 105
G L NP + I F+++
Sbjct: 228 GN-LFNNPRVSICFSRS 243
>gi|115478432|ref|NP_001062811.1| Os09g0298700 [Oryza sativa Japonica Group]
gi|50725522|dbj|BAD32991.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113631044|dbj|BAF24725.1| Os09g0298700 [Oryza sativa Japonica Group]
gi|222641269|gb|EEE69401.1| hypothetical protein OsJ_28759 [Oryza sativa Japonica Group]
Length = 1005
Score = 92.4 bits (228), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%)
Query: 9 RFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR 68
RF R + G PPSRHLWVG+LS + A+L++ FLR G++E ++ PGR
Sbjct: 25 RFSAARDDPPPRRSSSGWGVAPPSRHLWVGSLSPGVAAADLSELFLRCGDVEGISRDPGR 84
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEF 102
S+AF+ F EEDA+A+++ LQG L G P+RIEF
Sbjct: 85 SFAFVTFAREEDAVAAVRELQGIHLRGAPIRIEF 118
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 31 PSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PS LW+G + ++EA L + F FGE+ + PGR+YAF+ + A + + LQ
Sbjct: 168 PSEVLWIGFPVGLKVDEATLWEAFSPFGEVVKITTFPGRTYAFVQYTTIAAACRAKETLQ 227
Query: 90 G 90
G
Sbjct: 228 G 228
>gi|242048800|ref|XP_002462146.1| hypothetical protein SORBIDRAFT_02g020460 [Sorghum bicolor]
gi|241925523|gb|EER98667.1| hypothetical protein SORBIDRAFT_02g020460 [Sorghum bicolor]
Length = 1019
Score = 91.3 bits (225), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/82 (52%), Positives = 62/82 (75%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G PPSRHLWVG L+ ++ ++L++ FLR G++E VA QPGR++AF++F E DA+
Sbjct: 43 GSGWGVAPPSRHLWVGGLAPSVTASDLSELFLRCGDIEDVARQPGRNFAFVSFLREGDAV 102
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
A+++ LQG LAG P+RIEF+K
Sbjct: 103 AAVRELQGARLAGAPVRIEFSK 124
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 31 PSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PS LW+G ++EA L + F FG++ V PGR+YAF+ + A + +ALQ
Sbjct: 172 PSEVLWIGFPPGLKVDEALLWEAFSPFGKVLRVTTFPGRTYAFVQYTSIAAACRAKEALQ 231
Query: 90 G 90
G
Sbjct: 232 G 232
>gi|414884932|tpg|DAA60946.1| TPA: hypothetical protein ZEAMMB73_205486, partial [Zea mays]
Length = 176
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 60/76 (78%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL 88
PPSRHLWVG L+ ++ ++L++ FLR G++E VA +PGR++AF++F E DA+A+++ L
Sbjct: 50 APPSRHLWVGGLAPSVTASDLSELFLRCGDVEGVAREPGRNFAFVSFLREGDAVAAVREL 109
Query: 89 QGFPLAGNPLRIEFAK 104
QG LAG P+RIEF+K
Sbjct: 110 QGARLAGAPVRIEFSK 125
>gi|414884931|tpg|DAA60945.1| TPA: hypothetical protein ZEAMMB73_205486, partial [Zea mays]
Length = 174
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 60/76 (78%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL 88
PPSRHLWVG L+ ++ ++L++ FLR G++E VA +PGR++AF++F E DA+A+++ L
Sbjct: 49 APPSRHLWVGGLAPSVTASDLSELFLRCGDVEGVAREPGRNFAFVSFLREGDAVAAVREL 108
Query: 89 QGFPLAGNPLRIEFAK 104
QG LAG P+RIEF+K
Sbjct: 109 QGARLAGAPVRIEFSK 124
>gi|414884934|tpg|DAA60948.1| TPA: hypothetical protein ZEAMMB73_205486, partial [Zea mays]
Length = 152
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 61/82 (74%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G PPSRHLWVG L+ ++ ++L++ FLR G++E VA +PGR++AF++F E DA+
Sbjct: 43 ASGWGVAPPSRHLWVGGLAPSVTASDLSELFLRCGDVEGVAREPGRNFAFVSFLREGDAV 102
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
A+++ LQG LAG P+RIEF+K
Sbjct: 103 AAVRELQGARLAGAPVRIEFSK 124
>gi|168037574|ref|XP_001771278.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677367|gb|EDQ63838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PPSRHLW+GN+S + EA + D+F +FG+++SV R+YAF+NF+ EDA+ + LQ
Sbjct: 1 PPSRHLWIGNVSQDASEAAIRDKFSQFGDVDSVTVYSSRNYAFVNFRNLEDAVEAKTHLQ 60
Query: 90 GFPLAGNPLRIEFAK 104
GF L G +RIE+AK
Sbjct: 61 GFVLGGMAIRIEYAK 75
>gi|414884933|tpg|DAA60947.1| TPA: hypothetical protein ZEAMMB73_205486 [Zea mays]
Length = 1015
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 60/75 (80%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PPSRHLWVG L+ ++ ++L++ FLR G++E VA +PGR++AF++F E DA+A+++ LQ
Sbjct: 51 PPSRHLWVGGLAPSVTASDLSELFLRCGDVEGVAREPGRNFAFVSFLREGDAVAAVRELQ 110
Query: 90 GFPLAGNPLRIEFAK 104
G LAG P+RIEF+K
Sbjct: 111 GARLAGAPVRIEFSK 125
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 NTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
+T PS LW+G ++E L + F FG++ V PGR+YAF+ + A + +
Sbjct: 170 STDPSDVLWIGFPPGLKVDETLLWEAFSPFGKVLRVTTFPGRTYAFVQYTSIAAACRAKE 229
Query: 87 ALQG 90
ALQG
Sbjct: 230 ALQG 233
>gi|168011117|ref|XP_001758250.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690706|gb|EDQ77072.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1252
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%)
Query: 20 HSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEE 79
H G +TPPSRHLW+GN+SH+ EA + ++F + G+++SV R+YAF+NF+
Sbjct: 56 HHGRDDHEDTPPSRHLWIGNVSHDATEAAIREKFSQIGDVDSVTVYSSRNYAFVNFRNLH 115
Query: 80 DAIASMKALQGFPLAGNPLRIEFAK 104
DA+ + LQGF + G +RIE+AK
Sbjct: 116 DAVEAKNRLQGFVIGGMAIRIEYAK 140
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 31 PSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PS LWVG L ++E L F+ +GE+E V PGR+YAF+ F+ E+A + AL
Sbjct: 290 PSEILWVGFPLPSKVDEDGLRRAFMPYGEVERVKTFPGRTYAFVQFQKVEEATRAKNALD 349
Query: 90 GFPLAGNPLRIEFAKA 105
G + I ++K+
Sbjct: 350 GKLFDDPRVHIRYSKS 365
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
SRHLWVG +S N+ + + +F +G LE R+ AF+++ EDA+ +++AL
Sbjct: 173 SRHLWVGGISPNVTKEQIEGEFRNYGVLEDFKLLRERNCAFVDYIRIEDAVNAVEALNRK 232
Query: 92 PLAGNPLRIEFAKA 105
+ LR+++ ++
Sbjct: 233 RIGDEELRVDYGRS 246
>gi|326504492|dbj|BAJ91078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1019
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 59/84 (70%), Gaps = 2/84 (2%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
S G G A PPSRHLWVG+L + ++L+ F R G++E + PGR++AF+NF E+D
Sbjct: 44 SSGWGVA--PPSRHLWVGSLGPGVTASDLSQLFHRCGDIEGITRDPGRNFAFVNFMREQD 101
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
A+A+++ LQG L G PLRIEF+K
Sbjct: 102 AVAAVRELQGTRLHGVPLRIEFSK 125
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 28 NTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
+T PS LW+G ++EA L + F FGE+ + PGR+Y F+ + +A + +
Sbjct: 170 STEPSEVLWIGFPAGVKVDEAALWEAFSPFGEIVKITTFPGRTYGFVKYTTITEACRAKE 229
Query: 87 ALQG 90
ALQG
Sbjct: 230 ALQG 233
>gi|357153263|ref|XP_003576393.1| PREDICTED: uncharacterized protein LOC100824421 [Brachypodium
distachyon]
Length = 1003
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
S G G A PPSRHLWVG+L + ++L++ FLR GE+E + PGRS+AF++F E +
Sbjct: 60 SSGWGVA--PPSRHLWVGSLGSGVTVSDLSELFLRCGEIEGITRDPGRSFAFVSFMREHE 117
Query: 81 AIASMKALQGFPLAGNPLRIEF 102
A+A+++ LQG L G P+RIEF
Sbjct: 118 AVAAVRELQGTRLRGAPIRIEF 139
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 28 NTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
+T PS LW+G ++E L + F FGE+ + PGR+YAF+ + A + +
Sbjct: 186 STEPSEVLWIGFPAGLKVDETALWEAFSSFGEIVKITSFPGRTYAFVKYTSIAAACKAKE 245
Query: 87 ALQG 90
ALQG
Sbjct: 246 ALQG 249
>gi|255577189|ref|XP_002529477.1| RNA recognition motif-containing protein, putative [Ricinus
communis]
gi|223531035|gb|EEF32887.1| RNA recognition motif-containing protein, putative [Ricinus
communis]
Length = 902
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 53/74 (71%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PS +LWVGNL+ ++ +++L D F ++G L+SV RSYAF+ FK EDA A+ ALQG
Sbjct: 20 PSNNLWVGNLAPDVTDSDLMDLFAKYGALDSVTTYSSRSYAFLYFKHVEDAAAAKDALQG 79
Query: 91 FPLAGNPLRIEFAK 104
L GNP++IEFA+
Sbjct: 80 TLLRGNPVKIEFAR 93
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 50/75 (66%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PS++LWVG +S + + L ++FL+FG++E F R+ AFI + EDA+ +M+++ G
Sbjct: 97 PSKNLWVGGISPAVSKEQLEEEFLKFGKIEEFKFLRDRNTAFIEYVKLEDALEAMRSMNG 156
Query: 91 FPLAGNPLRIEFAKA 105
L G+ +R++F ++
Sbjct: 157 KRLGGDQIRVDFLRS 171
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 23 GGGRANTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA 81
GGR PPS LWVG S I+E L + + FGE+E + P R Y+F+ F+ ++A
Sbjct: 195 SGGRKEGPPSNVLWVGYPPSVQIDEQMLHNAMILFGEIERIKSFPARHYSFVEFRSVDEA 254
Query: 82 IASMKALQG 90
+ + LQG
Sbjct: 255 RRAKEGLQG 263
>gi|449471899|ref|XP_004153439.1| PREDICTED: flowering time control protein FPA-like [Cucumis
sativus]
Length = 1000
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 52/74 (70%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PS LWVGNLS + + +L + F +FG ++SV P RSYAFI FK EDA A+ +ALQG
Sbjct: 21 PSNSLWVGNLSMEVTDGDLMNLFAQFGGIDSVTSYPSRSYAFIFFKHMEDAQAAKEALQG 80
Query: 91 FPLAGNPLRIEFAK 104
+ L GN ++IEFA+
Sbjct: 81 YFLRGNSIKIEFAR 94
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P R+LWVG +S + L ++F +FG+++ F R+ AF+ + EDA +++ + G
Sbjct: 98 PCRNLWVGGISPAVSREQLEEEFSKFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMMNG 157
Query: 91 FPLAGNPLRIEFAKA 105
+ G LR++F ++
Sbjct: 158 KRIGGEQLRVDFLRS 172
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 RANTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
R + PPS+ LW+G S I+E L + + FGE+E + R +AF+ F+ ++A +
Sbjct: 216 RRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERITSFHSRHFAFVEFRSVDEARRA 275
Query: 85 MKALQG 90
+ LQG
Sbjct: 276 KEGLQG 281
>gi|449454582|ref|XP_004145033.1| PREDICTED: flowering time control protein FPA-like [Cucumis
sativus]
Length = 999
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 52/74 (70%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PS LWVGNLS + + +L + F +FG ++SV P RSYAFI FK EDA A+ +ALQG
Sbjct: 21 PSNSLWVGNLSMEVTDGDLMNLFAQFGGIDSVTSYPSRSYAFIFFKHMEDAQAAKEALQG 80
Query: 91 FPLAGNPLRIEFAK 104
+ L GN ++IEFA+
Sbjct: 81 YFLRGNSIKIEFAR 94
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P R+LWVG +S + L ++F +FG+++ F R+ AF+ + EDA +++ + G
Sbjct: 98 PCRNLWVGGISPAVSREQLEEEFSKFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMMNG 157
Query: 91 FPLAGNPLRIEFAKA 105
+ G LR++F ++
Sbjct: 158 KRIGGEQLRVDFLRS 172
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 RANTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
R + PPS+ LW+G S I+E L + + FGE+E + R +AF+ F+ ++A +
Sbjct: 216 RRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERITSFHSRHFAFVEFRSVDEARRA 275
Query: 85 MKALQG 90
+ LQG
Sbjct: 276 KEGLQG 281
>gi|356538883|ref|XP_003537930.1| PREDICTED: flowering time control protein FPA-like [Glycine max]
Length = 970
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 54/77 (70%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKA 87
+ PPS +LWVGNL+ ++ +A+L + F ++G L+SV RSYAF+ FK EDA A+ A
Sbjct: 14 SAPPSNNLWVGNLAADVTDADLMELFAKYGALDSVTSYSARSYAFVFFKRVEDAKAAKNA 73
Query: 88 LQGFPLAGNPLRIEFAK 104
LQG L G+ L+IEFA+
Sbjct: 74 LQGTSLRGSSLKIEFAR 90
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
+ LWVG +S + + +L +F +FG +E F R+ A + F EDA +MK + G
Sbjct: 95 CKQLWVGGISQAVTKEDLEAEFHKFGTIEDFKFFRDRNTACVEFFNLEDACQAMKIMNGK 154
Query: 92 PLAGNPLRIEFAKA 105
+ G +R++F ++
Sbjct: 155 RIGGEHIRVDFLRS 168
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 5 GGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVA 63
G + + G + + G + ++ PS LW+G + I+E L + + FGE+E +
Sbjct: 188 GPTDAYSGQKRPLHSQPPMGRKGDSQPSNILWIGYPPAVQIDEQMLHNAMILFGEIERIK 247
Query: 64 FQPGRSYAFINFKIEEDAIASMKALQG 90
P R+Y+ + F+ ++A + + LQG
Sbjct: 248 SFPSRNYSIVEFRSVDEARRAKEGLQG 274
>gi|356544510|ref|XP_003540693.1| PREDICTED: flowering time control protein FPA-like [Glycine max]
Length = 909
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PS +LWVGNL+ ++ +A+L + F ++G L+SV RSYAF+ FK EDA A+ ALQG
Sbjct: 17 PSNNLWVGNLAADVTDADLMELFAKYGALDSVTSYSARSYAFVFFKRVEDAKAAKNALQG 76
Query: 91 FPLAGNPLRIEFAK 104
L G+ L+IEFA+
Sbjct: 77 TSLRGSSLKIEFAR 90
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
+ LWVG +S + + +L +F +FG++E F R+ A + F EDA +MK + G
Sbjct: 95 CKQLWVGGISQAVTKEDLEAEFQKFGKIEDFKFFRDRNTACVEFFNLEDATQAMKIMNGK 154
Query: 92 PLAGNPLRIEFAKA 105
+ G +R++F ++
Sbjct: 155 RIGGEHIRVDFLRS 168
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 24 GGRANTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
GG+ ++ PS LW+G + I+E L + + FGE+E + P R+Y+ + F+ ++A
Sbjct: 192 GGKGDSQPSNILWIGYPPAVQIDEQMLHNAMILFGEIERIKSFPLRNYSIVEFRSVDEAR 251
Query: 83 ASMKALQG 90
+ + LQG
Sbjct: 252 RAKEGLQG 259
>gi|357473075|ref|XP_003606822.1| Flowering time control protein FPA [Medicago truncatula]
gi|355507877|gb|AES89019.1| Flowering time control protein FPA [Medicago truncatula]
Length = 973
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 20 HSGGG--GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKI 77
H G G ++ PS +L+V NLS ++ +++L D F+++G L+SV R+YAF+ FK
Sbjct: 12 HEGSGRYSEDSSTPSNNLYVANLSPDVTDSDLMDLFVQYGALDSVTSYSARNYAFVFFKR 71
Query: 78 EEDAIASMKALQGFPLAGNPLRIEFAK 104
+DA A+ ALQGF GN LRIEFA+
Sbjct: 72 IDDAKAAKNALQGFNFRGNSLRIEFAR 98
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
+ LWVG +S + + +L F +FG++E F R+ A + F +DAI +MK + G
Sbjct: 103 CKQLWVGGISPAVTKEDLEADFRKFGKVEDFKFFRDRNTACVEFFNLDDAIQAMKIMNGK 162
Query: 92 PLAGNPLRIEFAKA 105
+ G +R++F ++
Sbjct: 163 HIGGENIRVDFLRS 176
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 31 PSRHLWVGNLSH-NIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P+ LW+G + I+E L + + FGE+E + P R+++F+ F+ ++A + + LQ
Sbjct: 222 PNNILWIGYPPNVQIDEQMLHNAMILFGEIERIKSVPSRNFSFVEFRSVDEARRAKEGLQ 281
Query: 90 G 90
G
Sbjct: 282 G 282
>gi|224133226|ref|XP_002327991.1| predicted protein [Populus trichocarpa]
gi|222837400|gb|EEE75779.1| predicted protein [Populus trichocarpa]
Length = 934
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +LWVGN+S + +++L + F +FG L+SV RSYAF+ FK EDA + ALQG
Sbjct: 29 SNNLWVGNISREVADSDLMELFAQFGALDSVTTYSARSYAFVYFKHVEDAKQAKDALQGS 88
Query: 92 PLAGNPLRIEFAK 104
L GN ++IEFA+
Sbjct: 89 SLRGNQIKIEFAR 101
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 48/75 (64%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PS++LWVG +S ++ E L ++FL+FG++E F R A++ + EDA +MK + G
Sbjct: 105 PSKYLWVGGISSSVSEERLEEEFLKFGKIEDFKFLRDRKIAYVEYLKLEDAFEAMKNMNG 164
Query: 91 FPLAGNPLRIEFAKA 105
+ G+ +R++F ++
Sbjct: 165 KKIGGDQIRVDFLRS 179
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 24 GGRANTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
GGR + PS LWVG S I+E L + + FGE+E + P R Y+F+ F+ ++A
Sbjct: 215 GGRKDGQPSNILWVGYPPSVRIDEQMLHNAMILFGEIERIKSFPSRHYSFVEFRSVDEAR 274
Query: 83 ASMKALQG 90
+ + LQG
Sbjct: 275 RAKEGLQG 282
>gi|159473631|ref|XP_001694937.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276316|gb|EDP02089.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1623
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+RHLW+GN+ HN+++A L F RFG LESV P R++ F+NF + + A A+ AL G
Sbjct: 833 PNRHLWLGNIPHNVDKAELEALFSRFGPLESVRVFPDRNFCFVNFVLPQHAAAARLALDG 892
Query: 91 FP 92
P
Sbjct: 893 QP 894
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 4/75 (5%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
+RHLW+GNL A L F +G LESV R++AF+NF + A + AL+G
Sbjct: 297 ARHLWLGNLLPTTTGAQLERLFAPYGPLESVRVFADRNFAFVNFMTAQHASTAKAALEGQ 356
Query: 92 P----LAGNPLRIEF 102
P G PL I +
Sbjct: 357 PAFGITGGRPLLIRY 371
>gi|224093058|ref|XP_002309788.1| predicted protein [Populus trichocarpa]
gi|222852691|gb|EEE90238.1| predicted protein [Populus trichocarpa]
Length = 806
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +LWVGN+S ++ E++L F ++G +++V RSY F+ FK EDA + ALQG
Sbjct: 6 SNNLWVGNISRDVTESDLMKLFAQYGSIDNVTTYTARSYGFVYFKRVEDAKQAKDALQGT 65
Query: 92 PLAGNPLRIEFAK 104
L GN + IEFA+
Sbjct: 66 SLRGNQIIIEFAR 78
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 48/75 (64%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PSRHLWVG + ++ E L ++FL+FG++E F+ ++ A++ + EDA +MK + G
Sbjct: 82 PSRHLWVGGIGSSVSEEWLEEEFLKFGKIEDFKFRRDQNTAYVEYFKLEDASQAMKNMNG 141
Query: 91 FPLAGNPLRIEFAKA 105
+ G+ LR++F +
Sbjct: 142 KKIGGDQLRVDFLRT 156
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Query: 18 RTHSGGGGRANTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFK 76
R G R + PS LW+G S I+E + + + FGE+E + P R Y+F+ F+
Sbjct: 161 RIPKSPGERKDGQPSNILWIGYPPSVRIDEQMIHNAMILFGEIEKIKSFPSRHYSFVEFR 220
Query: 77 IEEDAIASMKALQGFPLAGNPLRIEFAKA 105
++A + + LQG + I F+ +
Sbjct: 221 SVDEARRAKEGLQGRLFCDPRITITFSSS 249
>gi|328865219|gb|EGG13605.1| hypothetical protein DFA_11366 [Dictyostelium fasciculatum]
Length = 620
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 17 DRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFK 76
DR PP ++LWVGN++ + E L D F +FG++E+V GRS AF+NF
Sbjct: 190 DRNEPSAPVDTTNPPCKNLWVGNVAAAVTEDQLRDVFEQFGKVENVRILVGRSCAFVNFT 249
Query: 77 IEEDAIASMKALQGFPLAGNPLRIEFAK 104
+ A+A+ LQG P+ G L I F +
Sbjct: 250 CIDHAMAAKNNLQGKPVQGYNLTINFRR 277
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P++ +W GN + E + F +G +++V P R ++FI F ++ + + L G
Sbjct: 115 PTKVIWAGNTHPDTTEEEVRGLFGPYGFVKTVKIVPQRRFSFITFADINASVQAQQELNG 174
Query: 91 FPLAGNPLRIEFAK 104
+ G PL++ F K
Sbjct: 175 YMHRGMPLKLGFGK 188
>gi|297820786|ref|XP_002878276.1| hypothetical protein ARALYDRAFT_907458 [Arabidopsis lyrata subsp.
lyrata]
gi|297324114|gb|EFH54535.1| hypothetical protein ARALYDRAFT_907458 [Arabidopsis lyrata subsp.
lyrata]
Length = 906
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 52/73 (71%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +LWVG+L+ + E+++ D F RFGE++ + RS+AFI ++ E+A+A+ +ALQG
Sbjct: 16 SNNLWVGSLTTDTTESDIADLFGRFGEIDRITAFSSRSFAFIYYRRVEEAVAAKEALQGA 75
Query: 92 PLAGNPLRIEFAK 104
L G+ ++IEFA+
Sbjct: 76 DLNGSLIKIEFAR 88
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + LWVG +S ++ + +L +F FG++E F R AFI+F EDAI + K + G
Sbjct: 92 PCKSLWVGGISPSVSKDDLEAKFRNFGKIEDFRFLRERKTAFIDFYNMEDAIEA-KNMNG 150
Query: 91 FPLAGNPLRIEFAKA 105
+ + LR++F ++
Sbjct: 151 KRMGNSYLRVDFLRS 165
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 20 HSGGGGRANTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIE 78
HS G PS L +G S I+E L + + FGE+E P R ++ + F+
Sbjct: 192 HSFGDAEGERRPSNVLRIGYPPSVQIDEQTLHNCMILFGEIERCISYPSRHFSLVEFRSI 251
Query: 79 EDAIASMKALQG 90
E+A + + L G
Sbjct: 252 EEARCAKEGLHG 263
>gi|297743841|emb|CBI36724.3| unnamed protein product [Vitis vinifera]
Length = 510
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
LWVGN+ +++ E++L F RFG L+ RS+AF+ F+ EDA A+ +ALQG +
Sbjct: 19 LWVGNVGNSVTESDLLAVFSRFGALDCFISYSSRSFAFVYFRRGEDARAAREALQGMVVL 78
Query: 95 GNPLRIEFAK 104
G P++IEFA+
Sbjct: 79 GTPMKIEFAR 88
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + LWVG S + + L ++FL+FG++E F R+ A + + EDA ++K L G
Sbjct: 92 PCKSLWVGGFSPSTTKGELENEFLKFGKIEDFKFFWDRNSALVEYVKLEDASQALKGLNG 151
Query: 91 FPLAGNPLRIEFAK 104
+ G +R++F +
Sbjct: 152 KQIGGAMIRVDFLR 165
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNL-SHNIEEANLTDQFLRFGELESVAFQP 66
E + G + + + S + PS LWVG S +EE L + + FGE+E + P
Sbjct: 208 EPYSGSKRQHSSQSSVIRKGEGQPSNVLWVGYPPSIQLEEQMLYNAMILFGEIERIKSFP 267
Query: 67 GRSYAFINFKIEEDAIASMKALQG 90
R Y+F+ F+ ++A + + LQG
Sbjct: 268 SRHYSFVEFRSIDEARRAKEGLQG 291
>gi|147801865|emb|CAN74982.1| hypothetical protein VITISV_007871 [Vitis vinifera]
Length = 1976
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
LWVGN+ +++ E++L F RFG L+ RS+AF+ F+ EDA A+ +ALQG +
Sbjct: 595 LWVGNVGNSVTESDLLAVFSRFGALDCFISYSSRSFAFVYFRRGEDARAAREALQGMVVL 654
Query: 95 GNPLRIEFAK 104
G P++IEFA+
Sbjct: 655 GTPMKIEFAR 664
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + LWVG S + + L ++FL+FG++E F R+ A + + EDA ++K L G
Sbjct: 668 PCKSLWVGGFSPSTTKGELENEFLKFGKIEDFKFFWDRNSALVEYVKLEDASQALKGLNG 727
Query: 91 FPLAGNPLRIEFAK 104
+ G +R++F +
Sbjct: 728 KQIGGAMIRVDFLR 741
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 31 PSRHLWVGNL-SHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PS LWVG S +EE L + + FGE+E + P R Y+F+ F+ ++A + + LQ
Sbjct: 1257 PSNVLWVGYPPSIQLEEQMLYNAMILFGEIERIKSFPSRHYSFVEFRSIDEARRAKEGLQ 1316
Query: 90 G 90
G
Sbjct: 1317 G 1317
>gi|359478105|ref|XP_002269583.2| PREDICTED: flowering time control protein FPA-like [Vitis vinifera]
Length = 878
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
LWVGN+ +++ E++L F RFG L+ RS+AF+ F+ EDA A+ +ALQG +
Sbjct: 19 LWVGNVGNSVTESDLLAVFSRFGALDCFISYSSRSFAFVYFRRGEDARAAREALQGMVVL 78
Query: 95 GNPLRIEFAK 104
G P++IEFA+
Sbjct: 79 GTPMKIEFAR 88
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + LWVG S + + L ++FL+FG++E F R+ A + + EDA ++K L G
Sbjct: 92 PCKSLWVGGFSPSTTKGELENEFLKFGKIEDFKFFWDRNSALVEYVKLEDASQALKGLNG 151
Query: 91 FPLAGNPLRIEFAK 104
+ G +R++F +
Sbjct: 152 KQIGGAMIRVDFLR 165
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 31 PSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PS LWVG S +EE L + + FGE+E + P R Y+F+ F+ ++A + + LQ
Sbjct: 199 PSNVLWVGYPPSIQLEEQMLYNAMILFGEIERIKSFPSRHYSFVEFRSIDEARRAKEGLQ 258
Query: 90 G 90
G
Sbjct: 259 G 259
>gi|440801020|gb|ELR22045.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1256
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 16 EDRTHSGGGGR-ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFIN 74
+ R +GG GR N PPSRHLWVGN + + +L F FG++ESV P ++Y F+N
Sbjct: 256 KSRELNGGPGRNKNFPPSRHLWVGN-ADRFTDRDLRTAFGAFGDIESVELLPTKAYGFVN 314
Query: 75 FKIEEDAIASMKALQGFPLAGNPLRIEF 102
F +E A+ + + L G L G L + +
Sbjct: 315 FYAKESAVQAKEKLHGVMLKGCRLLVHY 342
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
SRHLWVGNL + + L D+F R G++ESV+ P S+AF++F A + K LQ
Sbjct: 567 SRHLWVGNLDQGVHKRKLWDEFSRVGKVESVSRFP--SHAFVDFVSVRSAEKAHKYLQCV 624
Query: 92 PL 93
L
Sbjct: 625 TL 626
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL 88
T PSR +W G L+ +I L F +G + ++AF P YA + F+I ++A+ + K L
Sbjct: 345 TRPSRFVWAGPLTPDISLEKLNQTFSAYGAVRNIAFIPASDYAVVEFQILQEAVQAKKRL 404
Query: 89 QG 90
G
Sbjct: 405 NG 406
>gi|326533042|dbj|BAJ93493.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 854
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 50/73 (68%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R+LWVG +S +I + + D+F +FG++E +AF ++ A+I+F+ EDAI++ +AL G
Sbjct: 118 RNLWVGGISPSISKQEVEDEFQKFGKIEGIAFSHDQTSAYIDFEKLEDAISAHRALNGTD 177
Query: 93 LAGNPLRIEFAKA 105
L G L ++F ++
Sbjct: 178 LGGKELCVDFQRS 190
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPG-RSYAFINFKIEEDAIASMKALQGFPL 93
LWVGNL + E ++ F G L+ V + G RSYAF+ F+ +++ A+++AL+G +
Sbjct: 42 LWVGNLPTHAGEDDVMAAFAPHGALDCVVMRAGSRSYAFVLFRSVDESRAALEALRGSKV 101
Query: 94 AGNPLRIEFAK 104
G P+R+EF +
Sbjct: 102 KGLPIRVEFGR 112
>gi|384489804|gb|EIE81026.1| hypothetical protein RO3G_05731 [Rhizopus delemar RA 99-880]
Length = 699
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LWVGNL N+ L + F FG +ESV ++ FINF+ +EDA+ + +ALQ
Sbjct: 268 PTRALWVGNLPANVNATMLKNIFQAFGHIESVRILTHKNCGFINFEHQEDAVRARRALQN 327
Query: 91 FPLAG---NPLRIEFAK 104
+ G P+RI FAK
Sbjct: 328 KEILGLGTGPVRIGFAK 344
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
PSR LW+GN++ ++ +L+ F +G++ESV + AF+NF E A+A+ L+
Sbjct: 177 PSRALWLGNINPSLGVPDLSQLFSVYGQVESVRILSDKECAFVNFSTVEAAMAAKDDLET 236
Query: 90 --GFPLAGNPLRIEFAKA 105
G LAG P+R+ F KA
Sbjct: 237 RLGSKLAGTPVRVGFGKA 254
>gi|222423512|dbj|BAH19726.1| AT2G43410 [Arabidopsis thaliana]
Length = 901
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 51/73 (69%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +LWVG+L+ E++LT+ F R+G+++ + R +AFI ++ E+A+A+ +ALQG
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 92 PLAGNPLRIEFAK 104
L G+ ++IE+A+
Sbjct: 77 NLNGSQIKIEYAR 89
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + LWVG + N+ + L ++F +FG++E F R AFI++ +DA+ + K++ G
Sbjct: 93 PCKSLWVGGIGPNVSKDGLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQA-KSMNG 151
Query: 91 FPLAGNPLRIEFAKA 105
P+ G+ LR++F ++
Sbjct: 152 KPMGGSFLRVDFLRS 166
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 20 HSGGGGRANTPPSRHLWVG---NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFK 76
HS + + PS+ LW+G + +E L + + FGE+E V P R++A + F+
Sbjct: 193 HSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFR 252
Query: 77 IEEDAIASMKALQG 90
E+A + LQG
Sbjct: 253 SAEEARQCKEGLQG 266
>gi|20453185|gb|AAM19833.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
gi|27764946|gb|AAO23594.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
Length = 901
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 51/73 (69%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +LWVG+L+ E++LT+ F R+G+++ + R +AFI ++ E+A+A+ +ALQG
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 92 PLAGNPLRIEFAK 104
L G+ ++IE+A+
Sbjct: 77 NLNGSQIKIEYAR 89
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + LWVG + N+ + +L ++F +FG++E F R AFI++ +DA+ + K++ G
Sbjct: 93 PCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQA-KSMNG 151
Query: 91 FPLAGNPLRIEFAKA 105
P+ G+ LR++F ++
Sbjct: 152 KPMGGSFLRVDFLRS 166
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 20 HSGGGGRANTPPSRHLWVG---NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFK 76
HS + + PS+ LW+G + +E L + + FGE+E V P R++A + F+
Sbjct: 193 HSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFR 252
Query: 77 IEEDAIASMKALQG 90
E+A + LQG
Sbjct: 253 SAEEARQCKEGLQG 266
>gi|145331109|ref|NP_001078046.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331111|ref|NP_001078047.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331113|ref|NP_001078048.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|290463421|sp|Q8LPQ9.2|FPA_ARATH RecName: Full=Flowering time control protein FPA
gi|330255169|gb|AEC10263.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255170|gb|AEC10264.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255171|gb|AEC10265.1| Flowering time control protein FPA [Arabidopsis thaliana]
Length = 901
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 51/73 (69%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +LWVG+L+ E++LT+ F R+G+++ + R +AFI ++ E+A+A+ +ALQG
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 92 PLAGNPLRIEFAK 104
L G+ ++IE+A+
Sbjct: 77 NLNGSQIKIEYAR 89
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + LWVG + N+ + +L ++F +FG++E F R AFI++ +DA+ + K++ G
Sbjct: 93 PCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQA-KSMNG 151
Query: 91 FPLAGNPLRIEFAKA 105
P+ G+ LR++F ++
Sbjct: 152 KPMGGSFLRVDFLRS 166
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 20 HSGGGGRANTPPSRHLWVG---NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFK 76
HS + + PS+ LW+G + +E L + + FGE+E V P R++A + F+
Sbjct: 193 HSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFR 252
Query: 77 IEEDAIASMKALQG 90
E+A + LQG
Sbjct: 253 SAEEARQCKEGLQG 266
>gi|145360944|ref|NP_181869.2| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255168|gb|AEC10262.1| Flowering time control protein FPA [Arabidopsis thaliana]
Length = 858
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 51/73 (69%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +LWVG+L+ E++LT+ F R+G+++ + R +AFI ++ E+A+A+ +ALQG
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 92 PLAGNPLRIEFAK 104
L G+ ++IE+A+
Sbjct: 77 NLNGSQIKIEYAR 89
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + LWVG + N+ + +L ++F +FG++E F R AFI++ +DA+ + K++ G
Sbjct: 93 PCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQA-KSMNG 151
Query: 91 FPLAGNPLRIEFAKA 105
P+ G+ LR++F ++
Sbjct: 152 KPMGGSFLRVDFLRS 166
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 20 HSGGGGRANTPPSRHLWVG---NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFK 76
HS + + PS+ LW+G + +E L + + FGE+E V P R++A + F+
Sbjct: 193 HSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFR 252
Query: 77 IEEDAIASMKALQG 90
E+A + LQG
Sbjct: 253 SAEEARQCKEGLQG 266
>gi|297828039|ref|XP_002881902.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
gi|297327741|gb|EFH58161.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
Length = 902
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 51/73 (69%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +LWVG+L+ E++LT+ F R+G+++ + R +AFI ++ E+A+A+ +ALQG
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRRVEEAVAAKEALQGA 76
Query: 92 PLAGNPLRIEFAK 104
L G+ ++IE+A+
Sbjct: 77 NLNGSQIKIEYAR 89
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + LWVG + ++ + +L ++F +FG++E F R AFI++ +DA+ + K++ G
Sbjct: 93 PCKSLWVGGIGPSVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQA-KSMNG 151
Query: 91 FPLAGNPLRIEFAKA 105
+ G+ LR++F ++
Sbjct: 152 KRMGGSFLRVDFLRS 166
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 20 HSGGGGRANTPPSRHLWVG---NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFK 76
HS G+ + PS+ LW+G N + +E L + + +GE+E + P ++ + F+
Sbjct: 193 HSYDDGKGDVQPSKVLWIGYPPNATQCNDEQMLHNAMILYGEIERIKCYPSSHFSLVEFR 252
Query: 77 IEEDAIASMKALQG 90
E+A + + +QG
Sbjct: 253 SAEEARHAKEGIQG 266
>gi|414886318|tpg|DAA62332.1| TPA: hypothetical protein ZEAMMB73_716132 [Zea mays]
Length = 915
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R+LWVG +S +I + L +FL+FG++E VAF ++ A+I+F+ EDAI++ ++L G
Sbjct: 118 RNLWVGGISPSISKEELEGEFLKFGKVEGVAFSQDQTSAYIDFEKLEDAISAHRSLNGKM 177
Query: 93 LAGNPLRIEFAKA 105
L G L ++F ++
Sbjct: 178 LGGKELCVDFQRS 190
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 12 GGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG-RSY 70
G +D + G A +P + LWVGNL ++ E +L F G L+ + G RSY
Sbjct: 19 GSPSKDAVGTEVGAAAGSPETNTLWVGNLPSHVTEGDLLALFGPHGALDCALARAGSRSY 78
Query: 71 AFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
AF+ F+ +A +++A +G + G +R EFA+
Sbjct: 79 AFVLFRSPAEAREAVEATRGEKVKGAAMRTEFAR 112
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRS--YAF 72
RT G ++N P L+VGN+ +IEE++L D F FGELE V Q GRS Y F
Sbjct: 296 RTSEGQPTQSNGIPFHRLYVGNIHFSIEESDLRDVFEPFGELEFVQLQKEDTGRSKGYGF 355
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F ++A +++ + GF +AG P+R+
Sbjct: 356 VQFAKSDEAKIALEKMNGFEVAGRPIRV 383
>gi|357154289|ref|XP_003576733.1| PREDICTED: flowering time control protein FPA-like [Brachypodium
distachyon]
Length = 875
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R+LWVG +S +I + L ++F +FG++E VAF ++ A+I+F+ EDAI++ +AL G
Sbjct: 117 RNLWVGGISPSISKEELEEEFQKFGKIEGVAFSRDQTSAYIDFEKLEDAISAHRALNGTV 176
Query: 93 LAGNPLRIEFAKA 105
L G L ++F ++
Sbjct: 177 LGGKELCVDFQRS 189
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPG-RSYAFINFKIEEDAIASMKALQGFPL 93
LWVGNL E ++ F G L+ V + G RSY+F+ F+ ++ A+++AL+G +
Sbjct: 41 LWVGNLPPFASEDDVMAAFTAHGALDCVLTRAGSRSYSFVLFRSLSESRAALEALRGAKV 100
Query: 94 AGNPLRIEFAK 104
G+ +RIEFA+
Sbjct: 101 KGSSIRIEFAR 111
>gi|414886317|tpg|DAA62331.1| TPA: hypothetical protein ZEAMMB73_716132 [Zea mays]
Length = 947
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R+LWVG +S +I + L +FL+FG++E VAF ++ A+I+F+ EDAI++ ++L G
Sbjct: 150 RNLWVGGISPSISKEELEGEFLKFGKVEGVAFSQDQTSAYIDFEKLEDAISAHRSLNGKM 209
Query: 93 LAGNPLRIEFAKA 105
L G L ++F ++
Sbjct: 210 LGGKELCVDFQRS 222
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 12 GGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG-RSY 70
G +D + G A +P + LWVGNL ++ E +L F G L+ + G RSY
Sbjct: 19 GSPSKDAVGTEVGAAAGSPETNTLWVGNLPSHVTEGDLLALFGPHGALDCALARAGSRSY 78
Query: 71 AFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
AF+ F+ +A +++A +G + G +R EFA+
Sbjct: 79 AFVLFRSPAEAREAVEATRGEKVKGAAMRTEFAR 112
>gi|242049838|ref|XP_002462663.1| hypothetical protein SORBIDRAFT_02g029880 [Sorghum bicolor]
gi|241926040|gb|EER99184.1| hypothetical protein SORBIDRAFT_02g029880 [Sorghum bicolor]
Length = 918
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 51/73 (69%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R+LWVG++S ++ + L ++F +FG++E VAF ++ A+I+F+ EDAI++ ++L G
Sbjct: 122 RNLWVGSISPSVSKEELEEEFQKFGKVEGVAFSQDQTSAYIDFEKLEDAISAHRSLNGKT 181
Query: 93 LAGNPLRIEFAKA 105
L G L ++F ++
Sbjct: 182 LGGKELCVDFQRS 194
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG-RSYAFINFKIEEDAIASMKAL 88
P + LWVGNL ++ E +L F G L+ + G RSYAF+ F+ +A A+++A
Sbjct: 41 PETNTLWVGNLPLHVTEGDLLALFGPHGALDCALARAGSRSYAFLLFRSPAEARAAVEAT 100
Query: 89 QGFPLAGNPLRIEFAK 104
+G + G +R EFA+
Sbjct: 101 RGEKVKGAAMRTEFAR 116
>gi|62318594|dbj|BAD95007.1| hypothetical protein [Arabidopsis thaliana]
Length = 130
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 51/73 (69%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +LWVG+L+ E++LT+ F R+G+++ + R +AFI ++ E+A+A+ +ALQG
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 92 PLAGNPLRIEFAK 104
L G+ ++IE+A+
Sbjct: 77 NLNGSQIKIEYAR 89
>gi|307111688|gb|EFN59922.1| hypothetical protein CHLNCDRAFT_17893, partial [Chlorella
variabilis]
Length = 59
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P+RHLW+GNL A L F RFG ++ V PGR YAF+N++ E+A+ + LQ
Sbjct: 1 PTRHLWIGNLGTRTPRALLKTLFERFGTVDDVVTFPGRMYAFVNYRTTEEAVLAFDTLQ 59
>gi|302833936|ref|XP_002948531.1| hypothetical protein VOLCADRAFT_88720 [Volvox carteri f.
nagariensis]
gi|300266218|gb|EFJ50406.1| hypothetical protein VOLCADRAFT_88720 [Volvox carteri f.
nagariensis]
Length = 938
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P RHLW+GN+ + ++ +L F RFG +ESV P ++YAF+NFK + A A+ AL G
Sbjct: 640 PCRHLWLGNILSSAKQQDLEPVFSRFGAVESVRIFPAKNYAFVNFKSPQSAEAAKLALGG 699
Query: 91 FPL----AGNPLRIEFAK 104
P+ +PL + + +
Sbjct: 700 RPVPSLTGSSPLLLRYKR 717
Score = 36.6 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFK---IEE 79
GG + + PSRHL + N++ ++ L F +G LES+ + A +N+ E
Sbjct: 111 GGCLSCSIPSRHLLLSNITWTTDQQALEQLFACYGPLESIQLFHDKGCAVLNYSSTMCAE 170
Query: 80 DAIASMKALQGFPLAGN-PLRIEF 102
A AS+ ++ L GN PL I F
Sbjct: 171 AARASLSGVRIAILTGNRPLEICF 194
>gi|110331931|gb|ABG67071.1| RNA binding motif protein 15B [Bos taurus]
Length = 331
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 63 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 120
Query: 83 ASMKALQGFPLAG--NPLRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 121 AACAKMRGFPLGGPDRRLRVDFAKA 145
>gi|149520722|ref|XP_001515308.1| PREDICTED: putative RNA-binding protein 15B-like [Ornithorhynchus
anatinus]
Length = 595
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+ LWVG L N A L +F RFG + ++ + G S+A+I ++ + A A+ ++G
Sbjct: 125 PTTRLWVGGLGPNASLAALAREFDRFGSIRTIDYAKGDSFAYIQYESLDAAQAACAQMRG 184
Query: 91 FPLAGNP--LRIEFAKA 105
FPL G LR++FAKA
Sbjct: 185 FPLGGADRRLRVDFAKA 201
>gi|351711931|gb|EHB14850.1| Putative RNA-binding protein 15B [Heterocephalus glaber]
Length = 632
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 152 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 209
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 210 AACAKMRGFPLGGPDRRLRVDFAKA 234
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 78 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 137
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 138 AMSGRVIGRNPIKIGYGKA 156
>gi|390604396|gb|EIN13787.1| splicing factor CC1-like protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 433
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 14/97 (14%)
Query: 17 DRTHSGGGGRANTPPS-------RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---- 65
+RTH+G G N PP R L+VG+L N+ E+++ F FGELE V
Sbjct: 186 NRTHAGDGS-LNLPPGVSGTHGPRQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPM 244
Query: 66 PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI +K EDA +++ ++GF LAG LR+
Sbjct: 245 TGRSKGYCFIQYKRAEDAKMALEQMEGFELAGRTLRV 281
>gi|355746671|gb|EHH51285.1| hypothetical protein EGM_10631, partial [Macaca fascicularis]
Length = 597
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 117 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 174
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 175 AACAKMRGFPLGGPDRRLRVDFAKA 199
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 43 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 102
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 103 AMSGRVIGRNPIKIGYGKA 121
>gi|432092448|gb|ELK25063.1| Putative RNA-binding protein 15B [Myotis davidii]
Length = 649
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 167 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 224
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 225 AACAKMRGFPLGGPDRRLRVDFAKA 249
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 93 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 152
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 153 AMSGRVIGRNPIKIGYGKA 171
>gi|26344604|dbj|BAC35951.1| unnamed protein product [Mus musculus]
Length = 503
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 22 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 79
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 80 AACAKMRGFPLGGPDRRLRVDFAKA 104
>gi|426249916|ref|XP_004018692.1| PREDICTED: putative RNA-binding protein 15B, partial [Ovis aries]
Length = 612
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 133 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 190
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 191 AACAKMRGFPLGGPDRRLRVDFAKA 215
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 59 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 118
Query: 87 ALQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 119 GMSGRVIGRNPIKIGYGKA 137
>gi|75773735|gb|AAI04621.1| RBM15B protein [Bos taurus]
Length = 560
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 80 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 137
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 138 AACAKMRGFPLGGPDRRLRVDFAKA 162
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 6 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 65
Query: 87 ALQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 66 GMSGRVIGRNPIKIGYGKA 84
>gi|149018628|gb|EDL77269.1| rCG25263 [Rattus norvegicus]
Length = 564
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 83 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 140
Query: 83 ASMKALQGFPLAG--NPLRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 141 AACAKMRGFPLGGPDRRLRVDFAKA 165
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 9 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 68
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 69 AMSGRVIGRNPIKIGYGKA 87
>gi|354476449|ref|XP_003500437.1| PREDICTED: putative RNA-binding protein 15B-like [Cricetulus
griseus]
gi|344252785|gb|EGW08889.1| Putative RNA-binding protein 15B [Cricetulus griseus]
Length = 564
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 83 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 140
Query: 83 ASMKALQGFPLAG--NPLRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 141 AACAKMRGFPLGGPDRRLRVDFAKA 165
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 9 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 68
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 69 AMSGRVIGRNPIKIGYGKA 87
>gi|431913468|gb|ELK15143.1| Putative RNA-binding protein 15B [Pteropus alecto]
Length = 562
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 83 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 140
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 141 AACAKMRGFPLGGPDRRLRVDFAKA 165
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 9 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 68
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 69 AMSGRVIGRNPIKIGYGKA 87
>gi|57997108|emb|CAD38547.2| hypothetical protein [Homo sapiens]
gi|190689771|gb|ACE86660.1| RNA binding motif protein 15B protein [synthetic construct]
gi|190691137|gb|ACE87343.1| RNA binding motif protein 15B protein [synthetic construct]
Length = 563
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 83 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 140
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 141 AACAKMRGFPLGGPDRRLRVDFAKA 165
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 9 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 68
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 69 AMSGRVIGRNPIKIGYGKA 87
>gi|141795846|gb|AAI39837.1| RBM15B protein [Homo sapiens]
Length = 563
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 83 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 140
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 141 AACAKMRGFPLGGPDRRLRVDFAKA 165
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 9 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 68
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 69 AMSGRVIGRNPIKIGYGKA 87
>gi|37589116|gb|AAH52180.1| RNA binding motif protein 15B [Mus musculus]
Length = 564
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 83 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 140
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 141 AACAKMRGFPLGGPDRRLRVDFAKA 165
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 9 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 68
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 69 AMSGRVIGRNPIKIGYGKA 87
>gi|241896855|ref|NP_780611.3| putative RNA-binding protein 15B [Mus musculus]
gi|229462811|sp|Q6PHZ5.2|RB15B_MOUSE RecName: Full=Putative RNA-binding protein 15B; AltName:
Full=RNA-binding motif protein 15B
Length = 887
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 406 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 463
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 464 AACAKMRGFPLGGPDRRLRVDFAKA 488
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 332 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 391
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 392 AMSGRVIGRNPIKIGYGKA 410
>gi|444513559|gb|ELV10405.1| Putative RNA-binding protein 15B [Tupaia chinensis]
Length = 564
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 83 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 140
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 141 AACAKMRGFPLGGPDRRLRVDFAKA 165
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 9 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 68
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 69 AMSGRVIGRNPIKIGYGKA 87
>gi|380797055|gb|AFE70403.1| putative RNA-binding protein 15B, partial [Macaca mulatta]
Length = 683
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 203 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 260
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 261 AACAKMRGFPLGGPDRRLRVDFAKA 285
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 129 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 188
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 189 AMSGRVIGRNPIKIGYGKA 207
>gi|410951403|ref|XP_003982387.1| PREDICTED: putative RNA-binding protein 15B [Felis catus]
Length = 1145
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 666 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 723
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 724 AACAKMRGFPLGGPDRRLRVDFAKA 748
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 592 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 651
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 652 AMSGRVIGRNPIKIGYGKA 670
>gi|109485382|ref|XP_001074007.1| PREDICTED: putative RNA-binding protein 15B-like [Rattus
norvegicus]
Length = 860
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 379 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 436
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 437 AACAKMRGFPLGGPDRRLRVDFAKA 461
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 305 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 364
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 365 AMSGRVIGRNPIKIGYGKA 383
>gi|392350333|ref|XP_236613.6| PREDICTED: putative RNA-binding protein 15B-like [Rattus
norvegicus]
Length = 887
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 406 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 463
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 464 AACAKMRGFPLGGPDRRLRVDFAKA 488
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 332 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 391
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 392 AMSGRVIGRNPIKIGYGKA 410
>gi|395832707|ref|XP_003789398.1| PREDICTED: putative RNA-binding protein 15B [Otolemur garnettii]
Length = 886
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 406 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 463
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 464 AACAKMRGFPLGGPDRRLRVDFAKA 488
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 332 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 391
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 392 AMSGRVIGRNPIKIGYGKA 410
>gi|301767252|ref|XP_002919030.1| PREDICTED: putative RNA-binding protein 15B-like [Ailuropoda
melanoleuca]
Length = 761
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 282 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 339
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 340 AACAKMRGFPLGGPDRRLRVDFAKA 364
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 208 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 267
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 268 AMSGRVIGRNPIKIGYGKA 286
>gi|330864798|ref|NP_001193510.1| putative RNA-binding protein 15B [Bos taurus]
gi|296474899|tpg|DAA17014.1| TPA: RNA binding motif protein 15B [Bos taurus]
Length = 894
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 414 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 471
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 472 AACAKMRGFPLGGPDRRLRVDFAKA 496
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 340 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 399
Query: 87 ALQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 400 GMSGRVIGRNPIKIGYGKA 418
>gi|148689224|gb|EDL21171.1| mCG19533 [Mus musculus]
Length = 785
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 304 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 361
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 362 AACAKMRGFPLGGPDRRLRVDFAKA 386
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 230 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 289
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 290 AMSGRVIGRNPIKIGYGKA 308
>gi|281338063|gb|EFB13647.1| hypothetical protein PANDA_007613 [Ailuropoda melanoleuca]
Length = 732
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 253 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 310
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 311 AACAKMRGFPLGGPDRRLRVDFAKA 335
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 179 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 238
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 239 AMSGRVIGRNPIKIGYGKA 257
>gi|54607124|ref|NP_037418.3| putative RNA-binding protein 15B [Homo sapiens]
gi|114587106|ref|XP_516489.2| PREDICTED: putative RNA-binding protein 15B [Pan troglodytes]
gi|229463030|sp|Q8NDT2.3|RB15B_HUMAN RecName: Full=Putative RNA-binding protein 15B; AltName:
Full=One-twenty two protein 3; Short=HuOTT3; AltName:
Full=RNA-binding motif protein 15B
gi|119585543|gb|EAW65139.1| RNA binding motif protein 15B [Homo sapiens]
gi|410220072|gb|JAA07255.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410260990|gb|JAA18461.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410288636|gb|JAA22918.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410335595|gb|JAA36744.1| RNA binding motif protein 15B [Pan troglodytes]
gi|410335597|gb|JAA36745.1| RNA binding motif protein 15B [Pan troglodytes]
Length = 890
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 410 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 467
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 468 AACAKMRGFPLGGPDRRLRVDFAKA 492
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 336 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 395
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 396 AMSGRVIGRNPIKIGYGKA 414
>gi|311268970|ref|XP_003132286.1| PREDICTED: putative RNA-binding protein 15B-like [Sus scrofa]
Length = 893
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 413 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 470
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 471 AACAKMRGFPLGGPDRRLRVDFAKA 495
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 339 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 398
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 399 AMSGRVIGRNPIKIGYGKA 417
>gi|159163367|pdb|1WHY|A Chain A, Solution Structure Of The Rna Recognition Motif From
Hypothetical Rna Binding Protein Bc052180
Length = 97
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 10 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 67
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAK+
Sbjct: 68 AACAKMRGFPLGGPDRRLRVDFAKS 92
>gi|397496175|ref|XP_003818918.1| PREDICTED: putative RNA-binding protein 15B [Pan paniscus]
Length = 552
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 249 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 306
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 307 AACAKMRGFPLGGPDRRLRVDFAKA 331
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 175 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 234
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 235 AMSGRVIGRNPIKIGYGKA 253
>gi|402859962|ref|XP_003894405.1| PREDICTED: putative RNA-binding protein 15B [Papio anubis]
Length = 890
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 410 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 467
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 468 AACAKMRGFPLGGPDRRLRVDFAKA 492
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 336 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 395
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 396 AMSGRVIGRNPIKIGYGKA 414
>gi|348581977|ref|XP_003476753.1| PREDICTED: putative RNA-binding protein 15B-like [Cavia porcellus]
Length = 891
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 411 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 468
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 469 AACAKMRGFPLGGPDRRLRVDFAKA 493
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 337 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 396
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 397 AMSGRVIGRNPIKIGYGKA 415
>gi|359322208|ref|XP_003639807.1| PREDICTED: putative RNA-binding protein 15B-like [Canis lupus
familiaris]
Length = 898
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 419 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 476
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 477 AACAKMRGFPLGGPDRRLRVDFAKA 501
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 345 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 404
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 405 AMSGRVIGRNPIKIGYGKA 423
>gi|296225323|ref|XP_002758278.1| PREDICTED: putative RNA-binding protein 15B [Callithrix jacchus]
Length = 813
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 333 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 390
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 391 AACAKMRGFPLGGPDRRLRVDFAKA 415
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 259 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 318
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 319 AMSGRVIGRNPIKIGYGKA 337
>gi|388454468|ref|NP_001252598.1| putative RNA-binding protein 15B [Macaca mulatta]
gi|387540072|gb|AFJ70663.1| putative RNA-binding protein 15B [Macaca mulatta]
Length = 890
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 410 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 467
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 468 AACAKMRGFPLGGPDRRLRVDFAKA 492
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 336 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 395
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 396 AMSGRVIGRNPIKIGYGKA 414
>gi|388852381|emb|CCF53996.1| related to JSN1-RNA-binding protein (pumilio family) [Ustilago
hordei]
Length = 1305
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G AN PSR LW+G++ L F FG +ES+ +S AFINF+ +DAI
Sbjct: 634 GAEPANQEPSRALWIGSVPSTTCTEALMSIFSSFGPIESIRVLASKSCAFINFQRLDDAI 693
Query: 83 ASMKALQGFPLAGN---PLRIEFAKA 105
+ KAL G L G P++I FAK
Sbjct: 694 IARKALNGRELLGTELGPVKIGFAKV 719
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
P+R LW+G+L + +L F +G +E+ P ++ AFIN+ DA+
Sbjct: 520 PTRSLWIGHLRPDATSQDLLQSFSPYGPIETFRMVPEKACAFINYVDIVDAV 571
>gi|167621548|ref|NP_001108062.1| RNA binding motif protein 15B [Danio rerio]
gi|160773467|gb|AAI55335.1| Zgc:175165 protein [Danio rerio]
Length = 402
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ + G ++A+I+++ + A
Sbjct: 114 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDYVKGDNFAYIHYESLDAAQ 171
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 172 AACAQMRGFPLGGPSRRLRVDFAKA 196
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL HNI E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 40 TRNLFIGNLDHNITEVELRQGFDKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 99
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+QG + GNP++I + KA
Sbjct: 100 AMQGRMINGNPIKIGYGKA 118
>gi|441611741|ref|XP_004093062.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein 15B
[Nomascus leucogenys]
Length = 837
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 357 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 414
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 415 AACAKMRGFPLGGPDRRLRVDFAKA 439
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 283 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 342
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 343 AMSGRVIGRNPIKIGYGKA 361
>gi|410081644|ref|XP_003958401.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
gi|372464989|emb|CCF59266.1| hypothetical protein KAFR_0G02320 [Kazachstania africana CBS 2517]
Length = 620
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKA 87
N P + ++VGNL+ I E L F FG +E V PG+ F+ F + DA ASM
Sbjct: 317 NDPTNTTVFVGNLNCKITEDELQKVFEPFGAIEKVKIPPGKKCGFVKFCNKIDAEASMYG 376
Query: 88 LQGFPLAGNPLRIEF 102
LQG+ +AG+P+RI +
Sbjct: 377 LQGYFVAGSPIRISW 391
>gi|395733741|ref|XP_003776287.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein 15B
[Pongo abelii]
Length = 890
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 410 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 467
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ + GFPL G LR++FAKA
Sbjct: 468 AACAKMXGFPLGGPDRRLRVDFAKA 492
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 336 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 395
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 396 AMSGRVIGRNPIKIGYGKA 414
>gi|395516962|ref|XP_003762652.1| PREDICTED: putative RNA-binding protein 15B [Sarcophilus harrisii]
Length = 689
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 219 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 276
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 277 AACVQMRGFPLGGPDRRLRVDFAKA 301
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 145 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 204
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 205 AMSGRVVGRNPIKIGYGKA 223
>gi|126336349|ref|XP_001368088.1| PREDICTED: putative RNA-binding protein 15B-like [Monodelphis
domestica]
Length = 903
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G S+A+I ++ + A
Sbjct: 434 GYGKAN--PTTRLWVGGLGPNTSLAALAREFDRFGSIRTIDHVKGDSFAYIQYESLDAAQ 491
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 492 AACVQMRGFPLGGPERRLRVDFAKA 516
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 360 TRNLFIGNLDHSVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 419
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 420 AMSGRVVGRNPIKIGYGKA 438
>gi|363738498|ref|XP_003642020.1| PREDICTED: putative RNA-binding protein 15B [Gallus gallus]
Length = 783
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L + A L +F RFG + ++ + G S+A+I ++ + A
Sbjct: 309 GYGKAN--PTTRLWVGGLGPSTSLAALAREFDRFGSIRTIDYVKGDSFAYIQYESLDAAQ 366
Query: 83 ASMKALQGFPLAG--NPLRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 367 AACAQMRGFPLGGPERRLRVDFAKA 391
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL HN+ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 235 TRNLFIGNLDHNVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 294
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 295 AMSGRVVGRNPIKIGYGKA 313
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
RT G ++N+ P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 269 RTTEAAGTQSNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDTGRSRGYGF 328
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ ++ A +++ + GF LAG P+R+
Sbjct: 329 VQYRDAGQAREALEKMNGFDLAGRPIRV 356
>gi|327265765|ref|XP_003217678.1| PREDICTED: putative RNA-binding protein 15B-like [Anolis
carolinensis]
Length = 913
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L + A L +F RFG + ++ + G S+A+I ++ + A
Sbjct: 441 GYGKAN--PTTRLWVGGLGPSTSLAALAREFDRFGSIRTIDYVKGDSFAYIQYESLDAAQ 498
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 499 AACAQMRGFPLGGPERRLRVDFAKA 523
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL H++ EA L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 367 TRNLFIGNLDHSVSEAELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 426
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 427 AMSGRVVGRNPIKIGYGKA 445
>gi|224065811|ref|XP_002190221.1| PREDICTED: putative RNA-binding protein 15B [Taeniopygia guttata]
Length = 652
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L + A L +F RFG + ++ + G S+A+I ++ + A
Sbjct: 178 GYGKAN--PTTRLWVGGLGPSTSLAALAREFDRFGSIRTIDYVKGDSFAYIQYESLDAAQ 235
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAKA
Sbjct: 236 AACAQMRGFPLGGPERRLRVDFAKA 260
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R+L++GNL HN+ E L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 104 TRNLFIGNLDHNVSEVELRRAFEKYGIIEEVVIKRPARGQGGAYAFLKFQNLDMAHRAKV 163
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 164 AMSGRVVGRNPIKIGYGKA 182
>gi|302695543|ref|XP_003037450.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
gi|300111147|gb|EFJ02548.1| hypothetical protein SCHCODRAFT_80935 [Schizophyllum commune H4-8]
Length = 409
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
Query: 17 DRTHSGGGGRANTPP--------SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ--- 65
+R H+G G N PP + L+VG+L N+ EA++ F FGELE V
Sbjct: 159 NRLHAGDGN-LNLPPGVSAPHGGAMQLYVGSLHFNLTEADIKQVFEPFGELEFVDLHRDP 217
Query: 66 -PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS YAF+ +K EDA +M+ ++GF LAG L++
Sbjct: 218 TTGRSKGYAFVQYKRAEDARMAMEQMEGFELAGRQLKV 255
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
RT GG N P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 243 RTTEPGGSHPNHVPFHRLYVGNIHFNVTEQDLQAVFDPFGELEFVQLQKDETNRSRGYGF 302
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 303 VQFRDAGQAREALEKMNGFDLAGRPIRV 330
>gi|66800585|ref|XP_629218.1| hypothetical protein DDB_G0293252 [Dictyostelium discoideum AX4]
gi|60462622|gb|EAL60825.1| hypothetical protein DDB_G0293252 [Dictyostelium discoideum AX4]
Length = 691
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 10 FRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS 69
F GGRF+ P+++LW+GN++ N+ L F +FG ++++ GR
Sbjct: 257 FGGGRFDQYNKP----HQEETPTKNLWLGNVNSNVSYELLKQIFDQFGNVDTIRILHGRG 312
Query: 70 YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
AF+NF E A A+ L G + G PL+I F K
Sbjct: 313 CAFVNFFTVESAAAARNGLNGTMVCGMPLKINFRK 347
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 20 HSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEE 79
+ G GG+ P++ +W GN++ E + F +FG L+++ P + AFI F
Sbjct: 166 NKGAGGQLE--PTKIVWAGNINPESTEEEVRHLFSQFGYLQAIKIIPNKQCAFITFADVN 223
Query: 80 DAIASMKALQGFPLAGNPLRIEFAKA 105
AI + L G G PL++ F K
Sbjct: 224 CAIQAQFNLNGTIFRGLPLKLGFGKV 249
>gi|393218616|gb|EJD04104.1| splicing factor, CC1-like protein [Fomitiporia mediterranea MF3/22]
Length = 464
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 55/95 (57%), Gaps = 12/95 (12%)
Query: 17 DRTHSGGGGRANTPPSRH-----LWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PG 67
++TH+G G N PP L+VG+L N+ E+++ F FGEL+ V G
Sbjct: 218 NKTHAGDGS-INLPPGASGRGATLYVGSLHFNLTESDIKQVFEPFGELDFVDLHKDSATG 276
Query: 68 RS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
RS YAFI++K EDA +++ ++GF LAG LR+
Sbjct: 277 RSKGYAFIHYKRAEDAKMALEQMEGFELAGRTLRV 311
>gi|392597434|gb|EIW86756.1| splicing factor CC1-like protein [Coniophora puteana RWD-64-598
SS2]
Length = 360
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 17 DRTHSGGGGRANTPPSRH-------LWVGNLSHNIEEANLTDQFLRFGELESVAFQ---- 65
+R H G G N PP H L+VG+L N+ EA++ F FG+LE V
Sbjct: 113 NRLHPGDGN-LNLPPGVHAPHGAMQLYVGSLHFNLTEADIKQVFEPFGDLEFVDLHRDST 171
Query: 66 PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS YAF+ +K EDA +++ + GF LAG LR+
Sbjct: 172 TGRSKGYAFVQYKRPEDAKMALEQMDGFELAGRTLRV 208
>gi|348533327|ref|XP_003454157.1| PREDICTED: hypothetical protein LOC100707118 [Oreochromis
niloticus]
Length = 514
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 40/70 (57%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R LWVGN++ + E +L D F FGE+ES+ R AF+NFK A ++ LQG
Sbjct: 367 RSLWVGNITQEVTEKDLCDLFKNFGEIESIRVLHERFCAFVNFKNANMAAKALDKLQGVE 426
Query: 93 LAGNPLRIEF 102
L GN L + +
Sbjct: 427 LGGNKLVMRY 436
>gi|156843736|ref|XP_001644934.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
gi|156115587|gb|EDO17076.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
Length = 587
Score = 57.8 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 45/71 (63%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
+++G LS I E+ + F FG + +V PG++ F+ F+ DA A+++ LQGF +A
Sbjct: 382 VFIGGLSPKINESQVRSLFKPFGNIVNVKLPPGKNCGFVKFENRIDAEAAIQGLQGFIVA 441
Query: 95 GNPLRIEFAKA 105
GNP+R+ + KA
Sbjct: 442 GNPIRLSWGKA 452
>gi|255568699|ref|XP_002525321.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223535380|gb|EEF37054.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 126
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PGRS--YAFINFKIEEDAIA 83
PP+ L+V LS +++E +L D F FGE+ V GRS + F+NF E +A+
Sbjct: 22 PPNSKLFVAGLSWSVDEKSLKDAFSSFGEVSEVRIMYDKDSGRSRGFGFVNFSKENEAVC 81
Query: 84 SMKALQGFPLAGNPLRIEFA 103
+ A+ G L G PLRI FA
Sbjct: 82 AKDAMDGKALLGRPLRISFA 101
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 17 DRTHSGGGGRANTPP---SRH---LWVGNLSHNIEEANLTDQFLRFGELESVAFQ----P 66
++TH+G G N PP + H L+VG+L N+ E+++ F FGELE V
Sbjct: 316 NKTHAGDGS-INLPPGVSAPHGAILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMT 374
Query: 67 GRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS YAF+ +K EDA +++ ++GF LAG LR+
Sbjct: 375 GRSKGYAFVQYKRAEDARMALQQMEGFELAGRTLRV 410
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 17 DRTHSGGGGRANTPP---SRH---LWVGNLSHNIEEANLTDQFLRFGELESVAFQ----P 66
++TH+G G N PP + H L+VG+L N+ E+++ F FGELE V
Sbjct: 316 NKTHAGDGS-INLPPGVSAPHGAILYVGSLHFNLTESDIKQVFEVFGELEFVDLHRDAMT 374
Query: 67 GRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS YAF+ +K EDA +++ ++GF LAG LR+
Sbjct: 375 GRSKGYAFVQYKRAEDARMALQQMEGFELAGRTLRV 410
>gi|145531303|ref|XP_001451420.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419071|emb|CAK84023.1| unnamed protein product [Paramecium tetraurelia]
Length = 158
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG--RSYAFINFKIEEDAIASMK 86
+ P + LW+GNL++ +++ +L + F ++G++ + YAF+ F+ E AI +
Sbjct: 2 SEPKKKLWIGNLAYKVQKDDLEELFKQYGQITEIKVLDKGPHVYAFVEFEKVEKAIDAFN 61
Query: 87 ALQGFPLAGNPLRIEFA 103
+LQG L G ++IE+A
Sbjct: 62 SLQGRELKGQAMKIEYA 78
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G N+ P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 258 RNTESTSGNPNSVPFHRLYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDDNGRSRGYGF 317
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 318 VQFRDATQAREALEKMNGFDLAGRPIRV 345
>gi|145500107|ref|XP_001436037.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403175|emb|CAK68640.1| unnamed protein product [Paramecium tetraurelia]
Length = 158
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG--RSYAFINFKIEEDAIASMK 86
+ P + LW+GNL++ +++ +L + F ++G++ + YAF+ F+ E AI +
Sbjct: 2 SEPKKKLWIGNLAYKVQKDDLEELFKQYGQITEIKVLDKGPHVYAFVEFEKVEKAIEAYN 61
Query: 87 ALQGFPLAGNPLRIEFA 103
+LQG L G ++IE+A
Sbjct: 62 SLQGRELKGQAMKIEYA 78
>gi|443715596|gb|ELU07509.1| hypothetical protein CAPTEDRAFT_122321, partial [Capitella teleta]
Length = 274
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL 88
T S +W+G+LS N + N+ D+ + +GE+ SV P R A++ +DA ++ L
Sbjct: 137 TVCSTTIWIGHLSKNTTQDNIMDEMVNYGEVHSVNLVPPRGCAYVCLSSRKDASRALSKL 196
Query: 89 QGFPLAGNPLRIEFA 103
+G L GN L++ +A
Sbjct: 197 KGVKLLGNTLKVAWA 211
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G N+ P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 262 RNTESTSGNPNSVPFHRLYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDDNGRSRGYGF 321
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 322 VQFRDATQAREALEKMNGFDLAGRPIRV 349
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRS--YAF 72
R G +T P L+VGN+ +I E +LT+ F FGELE V Q GRS YAF
Sbjct: 250 RNPEATAGNQHTAPFHRLYVGNVHFSITEDDLTNVFEPFGELEFVQLQKDETGRSKGYAF 309
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F E A +++ + GF LAG +R+
Sbjct: 310 VQFANPEQARDALEKMNGFELAGRAIRV 337
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRS--YAF 72
R G +T P L+VGN+ +I E +LT+ F FGELE V Q GRS YAF
Sbjct: 257 RNTESTSGHHHTAPFHRLYVGNVHFSITEEDLTNVFEPFGELEFVQLQKDETGRSKGYAF 316
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F E A +++ + GF LAG +R+
Sbjct: 317 VQFANPEQARDALEKMNGFELAGRAIRV 344
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 20 HSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFIN 74
+S G N+ P L+VGN+ +I E +L + F FGELE V Q R Y F+
Sbjct: 279 NSESSGHPNSIPFHRLYVGNIHFSITETDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQ 338
Query: 75 FKIEEDAIASMKALQGFPLAGNPLRI 100
F+ A +++ + GF LAG P+R+
Sbjct: 339 FRDASQAREALEKMNGFDLAGRPIRV 364
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R GG N P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 254 RNTEAGGPHPNHVPFHRLYVGNIHFNVTEEDLRAVFEPFGELEFVQLQKDESDRSRGYGF 313
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 314 VQFRDATQAREALEKMNGFDLAGRPIRV 341
>gi|384490609|gb|EIE81831.1| hypothetical protein RO3G_06536 [Rhizopus delemar RA 99-880]
Length = 807
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LWVGN+ +N + L D F FG +ESV P ++ AFINF E+A+ + +AL
Sbjct: 349 PTRALWVGNIPNNTTQVMLVDTFSTFGTIESVRVLPHKNCAFINFFNVEEAVMAKRALHN 408
Query: 91 FPLAGN---PLRIEFAK 104
+ G ++ FAK
Sbjct: 409 REIMGQGTGAVKTGFAK 425
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL-- 88
PSR LW+G L + + L F +FG +ES+ P R AFIN+ E+A+ + L
Sbjct: 256 PSRSLWIGQLDLALTTSELNGMFSKFGAIESIRILPDRECAFINYFGVEEALRARDVLVN 315
Query: 89 -QGFPLAGNPLRIEFAK 104
G L +++ F K
Sbjct: 316 KMGSRLGNTIVKVGFGK 332
>gi|195332305|ref|XP_002032839.1| GM20997 [Drosophila sechellia]
gi|194124809|gb|EDW46852.1| GM20997 [Drosophila sechellia]
Length = 763
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +W+G L L +F RFG ++ + +Q G YA+I ++ E A A+
Sbjct: 357 GYGKVTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAA 416
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 417 VKEMRGFPLGGPERRLRTDFAE 438
>gi|336389603|gb|EGO30746.1| hypothetical protein SERLADRAFT_455043 [Serpula lacrymans var.
lacrymans S7.9]
Length = 583
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 23 GGGRANTPP-------SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PGRS-- 69
G G N PP + L+VG+L N+ E+++ F FGELE V GRS
Sbjct: 341 GDGNLNLPPGVSAPHGAMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKG 400
Query: 70 YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
YAF+ +K EDA +++ ++GF LAG LR+
Sbjct: 401 YAFVQYKRAEDARMALEQMEGFELAGRTLRV 431
>gi|198457395|ref|XP_001360651.2| GA15511 [Drosophila pseudoobscura pseudoobscura]
gi|198135960|gb|EAL25226.2| GA15511 [Drosophila pseudoobscura pseudoobscura]
Length = 782
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +W+G L L +F RFG ++ + +Q G YA+I ++ E A A+
Sbjct: 375 GYGKVTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAA 434
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 435 VKEMRGFPLGGPERRLRTDFAE 456
>gi|195150583|ref|XP_002016230.1| GL11478 [Drosophila persimilis]
gi|194110077|gb|EDW32120.1| GL11478 [Drosophila persimilis]
Length = 782
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +W+G L L +F RFG ++ + +Q G YA+I ++ E A A+
Sbjct: 375 GYGKVTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAA 434
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 435 VKEMRGFPLGGPERRLRTDFAE 456
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP---GRS--YAF 72
RT G ++N P L+VGN+ +I EA+L + F FGELE Q GRS Y F
Sbjct: 320 RTTEGTATQSNGVPFHRLYVGNIHFSITEADLKNVFEPFGELEFAQLQKEENGRSKGYGF 379
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F A +++ + GF LAG P+R+
Sbjct: 380 VQFIDPAQAKEALEKMNGFELAGRPIRV 407
>gi|336376609|gb|EGO04944.1| hypothetical protein SERLA73DRAFT_174031 [Serpula lacrymans var.
lacrymans S7.3]
Length = 583
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 13/91 (14%)
Query: 23 GGGRANTPP-------SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PGRS-- 69
G G N PP + L+VG+L N+ E+++ F FGELE V GRS
Sbjct: 341 GDGNLNLPPGVSAPHGAMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKG 400
Query: 70 YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
YAF+ +K EDA +++ ++GF LAG LR+
Sbjct: 401 YAFVQYKRAEDARMALEQMEGFELAGRTLRV 431
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
RT G N+ P L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 266 RTTETSGHHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGF 325
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 326 VQFRDAGQAREALEKMNGFDLAGRPIRV 353
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
RT G N+ P L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 267 RTTETSGHHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGF 326
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 327 VQFRDAGQAREALEKMNGFDLAGRPIRV 354
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
RT G N+ P L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 267 RTTETSGHHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGF 326
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 327 VQFRDAGQAREALEKMNGFDLAGRPIRV 354
>gi|195383756|ref|XP_002050592.1| GJ20116 [Drosophila virilis]
gi|194145389|gb|EDW61785.1| GJ20116 [Drosophila virilis]
Length = 793
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +W+G L L +F RFG ++ + +Q G YA+I ++ E A A+
Sbjct: 388 GYGKVTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAA 447
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 448 VKEMRGFPLGGPERRLRTDFAE 469
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
RT G N+ P L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 267 RTTETSGHHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGF 326
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 327 VQFRDAGQAREALEKMNGFDLAGRPIRV 354
>gi|195474554|ref|XP_002089556.1| GE19164 [Drosophila yakuba]
gi|194175657|gb|EDW89268.1| GE19164 [Drosophila yakuba]
Length = 774
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +W+G L L +F RFG ++ + +Q G YA+I ++ E A A+
Sbjct: 368 GYGKVTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAA 427
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 428 VKEMRGFPLGGPERRLRTDFAE 449
>gi|195121748|ref|XP_002005381.1| GI20446 [Drosophila mojavensis]
gi|193910449|gb|EDW09316.1| GI20446 [Drosophila mojavensis]
Length = 791
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +W+G L L +F RFG ++ + +Q G YA+I ++ E A A+
Sbjct: 388 GYGKVTPATRIWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAA 447
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 448 VKEMRGFPLGGPERRLRTDFAE 469
>gi|19921778|ref|NP_610339.1| spenito, isoform B [Drosophila melanogaster]
gi|24586450|ref|NP_724633.1| spenito, isoform A [Drosophila melanogaster]
gi|5052618|gb|AAD38639.1|AF145664_1 BcDNA.GH11110 [Drosophila melanogaster]
gi|7304123|gb|AAF59160.1| spenito, isoform B [Drosophila melanogaster]
gi|21627747|gb|AAM68878.1| spenito, isoform A [Drosophila melanogaster]
gi|220953662|gb|ACL89374.1| nito-PA [synthetic construct]
Length = 793
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +W+G L L +F RFG ++ + +Q G YA+I ++ E A A+
Sbjct: 387 GYGKVTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAA 446
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 447 VKEMRGFPLGGPERRLRTDFAE 468
>gi|194863642|ref|XP_001970541.1| GG23320 [Drosophila erecta]
gi|190662408|gb|EDV59600.1| GG23320 [Drosophila erecta]
Length = 774
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +W+G L L +F RFG ++ + +Q G YA+I ++ E A A+
Sbjct: 368 GYGKVTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAA 427
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 428 VKEMRGFPLGGPERRLRTDFAE 449
>gi|330812809|ref|XP_003291310.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
gi|325078525|gb|EGC32172.1| hypothetical protein DICPUDRAFT_38760 [Dictyostelium purpureum]
Length = 587
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+++LW+GN+ ++ L F +FG ++++ GR AF+NF E AIA+ L G
Sbjct: 217 PTKNLWLGNIGPSVTSETLKQLFDQFGNVDNIRILVGRGCAFVNFFTVESAIAARNNLTG 276
Query: 91 FPLAGNPLRIEFAK 104
+ G PL+I F K
Sbjct: 277 TMVCGMPLKINFRK 290
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 20 HSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEE 79
H G G+ T P++ +W GN+ + E + F +FG ++++ P + AFI F
Sbjct: 105 HLQGSGKP-TEPTKIVWAGNVHPDSSEDEIRGLFSQFGYIQAIKIIPAKQCAFITFGDVN 163
Query: 80 DAIASMKALQGFPLAGNPLRIEFAK 104
AIA+ L G P+ G PL++ F K
Sbjct: 164 AAIAAQYNLNGTPIRGYPLKLGFGK 188
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS------YAFINFKIEEDA 81
+PP+ LW+G+LS ++ E + + F + G+++SV R + ++ F EDA
Sbjct: 289 QSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDA 348
Query: 82 IASMKALQGFPLAGNPLRIEFA 103
A++KA+ G +AG +R++FA
Sbjct: 349 SAALKAMNGAEIAGRAIRVDFA 370
>gi|17862204|gb|AAL39579.1| LD14125p [Drosophila melanogaster]
Length = 589
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+ +W+G L L +F RFG ++ + +Q G YA+I ++ E A A++K ++G
Sbjct: 189 PATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAAVKEMRG 248
Query: 91 FPLAGNP--LRIEFAK 104
FPL G LR +FA+
Sbjct: 249 FPLGGPERRLRTDFAE 264
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP- 66
E+ R R D T G N+ P L+VGN+ N+ E +L F FGELE V Q
Sbjct: 262 EKNRQARNPDST----SGHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD 317
Query: 67 ----GRSYAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
R Y F+ F+ A +++ + GF LAG P+R+
Sbjct: 318 DNGRSRGYGFVQFRDAGQAREALEKMNGFDLAGRPIRV 355
>gi|195581400|ref|XP_002080522.1| GD10528 [Drosophila simulans]
gi|194192531|gb|EDX06107.1| GD10528 [Drosophila simulans]
Length = 768
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +W+G L L +F RFG ++ + +Q G YA+I ++ E A A+
Sbjct: 368 GYGKVTPATRMWIGGLGAWTSVTQLEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATAA 427
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 428 VKEMRGFPLGGPERRLRTDFAE 449
>gi|392571432|gb|EIW64604.1| splicing factor CC1-like protein [Trametes versicolor FP-101664
SS1]
Length = 344
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 17 DRTHSGGGGRANTPPS-------RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---- 65
+R H G G N PP L+VG+L N+ E+++ F FGELE V
Sbjct: 96 NRLHPGDGN-LNLPPGVSAPHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPM 154
Query: 66 PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS YAF+ +K EDA +++ ++GF LAG LR+
Sbjct: 155 TGRSKGYAFVQYKRAEDAKMALEQMEGFELAGRTLRV 191
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 20 HSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFIN 74
+S G N+ P L+VGN+ +I E +L + F FGELE V Q R Y F+
Sbjct: 268 NSESSGHPNSVPFHRLYVGNIHFSITETDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQ 327
Query: 75 FKIEEDAIASMKALQGFPLAGNPLRI 100
F+ A +++ + GF LAG P+R+
Sbjct: 328 FRDAGQAREALEKMNGFDLAGRPIRV 353
>gi|170083917|ref|XP_001873182.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650734|gb|EDR14974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 448
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 23 GGGRANTPP---SRH---LWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PGRS--Y 70
G G N PP + H L+VG+L N+ E+++ F FGELE V GRS Y
Sbjct: 206 GDGSLNLPPGVTASHGAILYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKGY 265
Query: 71 AFINFKIEEDAIASMKALQGFPLAGNPLRI 100
AF+ +K EDA +++ ++GF LAG LR+
Sbjct: 266 AFVQYKRSEDARMALEQMEGFELAGRTLRV 295
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G N+ P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 269 RNPDASNGHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGF 328
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 329 VQFRDAGQAREALEKMNGFDLAGRPIRV 356
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 17 DRTHSGGGGRANTPPS-------RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---- 65
+R H G G N PP L+VG+L N+ E+++ F FGELE V
Sbjct: 375 NRLHPGDGN-LNLPPGVSASHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPM 433
Query: 66 PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS YAF+ +K EDA +++ ++GF LAG LR+
Sbjct: 434 TGRSKGYAFVQYKRSEDARMALEQMEGFELAGRTLRV 470
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G N+ P L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 263 RNPDATGNHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDTGRSRGYGF 322
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 323 VQFRDATQAREALEKMNGFDLAGRPIRV 350
>gi|301612329|ref|XP_002935665.1| PREDICTED: putative RNA-binding protein 15B-like [Xenopus
(Silurana) tropicalis]
Length = 749
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+ N PS LWVG L N A L +F RFG + +V + G S+A+I ++ + A
Sbjct: 310 GYGKPN--PSTRLWVGGLGPNTSLAALAREFDRFGSIRTVDYVKGDSFAYIQYESLDAAQ 367
Query: 83 ASMKALQGFPLAGNPLRIEFA 103
A+ ++GF L LR++FA
Sbjct: 368 AACTQMRGFALGDRRLRVDFA 388
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 10/107 (9%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTP-----PSRHLWVGNLSHNIEEANLTDQFLRFGELESV 62
ER RG + + S P +R+L++GNL H + E +L F ++G +E V
Sbjct: 207 ERVRGATYGMSSTSTADDEQLAPEDDHRATRNLFIGNLDHMVSEVDLRRAFDKYGPIEEV 266
Query: 63 AFQ-PGR----SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
+ PGR +YAF+ F+ + A + A+ G L N ++I + K
Sbjct: 267 VIKRPGRGQGAAYAFLRFQNLDMAHRAKLAMSGRLLGRNAMKIGYGK 313
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS------YAFINFKIEEDAI 82
+PP+ LW+G+LS ++ E + + F + G+++SV R + ++ F +DA
Sbjct: 292 SPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDAS 351
Query: 83 ASMKALQGFPLAGNPLRIEFA 103
A++KA+ G +AG +R++FA
Sbjct: 352 AALKAMNGAEIAGRAIRVDFA 372
>gi|194757497|ref|XP_001961001.1| GF13651 [Drosophila ananassae]
gi|190622299|gb|EDV37823.1| GF13651 [Drosophila ananassae]
Length = 774
Score = 55.8 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +WVG L L +F RFG ++ + +Q G YA+I ++ E A A+
Sbjct: 368 GYGKVTPATRIWVGGLGAWTSVTQLEREFDRFGVIKKIEYQKGEPYAYIQYETVEAATAA 427
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 428 VKEMRGFPLGGPERRLRTDFAE 449
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS------YAFINFKIEEDAI 82
+PP+ LW+G+LS ++ E + + F + G+++SV R + ++ F +DA
Sbjct: 289 SPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDAS 348
Query: 83 ASMKALQGFPLAGNPLRIEFA 103
A++KA+ G +AG +R++FA
Sbjct: 349 AALKAMNGAEIAGRAIRVDFA 369
>gi|321258093|ref|XP_003193811.1| puf protein [Cryptococcus gattii WM276]
gi|317460281|gb|ADV22024.1| Puf protein, putative [Cryptococcus gattii WM276]
Length = 1236
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 6 GRERFRGGRFEDRTHSGGGGR-----ANTP--PSRHLWVGNLSHNIEEANLTDQFLRFGE 58
R+ R GR +H+ G ++TP P+R LW+GNL N + L F +G
Sbjct: 351 SRDSSRAGRLSISSHTSRTGTPEDKGSSTPQVPTRSLWIGNLDVNATSSALLHVFAPYGA 410
Query: 59 LESVAFQPGRSYAFINFKIEEDAI 82
+ESV P ++ AF+NF + DAI
Sbjct: 411 IESVRMLPEKTCAFVNFMDKVDAI 434
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ + L F FG +ES + F+NF+ + A+++ AL G
Sbjct: 541 PTRALWIGSIPSTTSASTLLQIFSPFGPVESSRVLQNKCCGFVNFERLDSAVSARNALNG 600
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ P+RI FA+
Sbjct: 601 RDILGSDVGPIRIGFARV 618
>gi|66821693|ref|XP_644288.1| hypothetical protein DDB_G0274995 [Dictyostelium discoideum AX4]
gi|60472437|gb|EAL70390.1| hypothetical protein DDB_G0274995 [Dictyostelium discoideum AX4]
Length = 1104
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 8 ERFRGGRFEDRTHS---GGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF 64
E+ + FE +T S G G + PSR LWVGN+ ++ E +L +F FGELESV
Sbjct: 886 EKIKLSWFEFQTLSNSIGDGEDEDHLPSRVLWVGNIGMDVSEDDLKYEFGSFGELESVRI 945
Query: 65 QPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEF 102
+ AF+NFK +AI + K + L + + F
Sbjct: 946 LHNKYCAFVNFKDTNEAINAKKGMHNQVLGSQYIVVNF 983
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 43/73 (58%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
SR +++GN+S N+ E + + ++GE+ES+ ++ AF+NF +A A+++ L G
Sbjct: 1010 SRAIYIGNVSDNLPEKEIRKECEKYGEIESIRILRKKACAFVNFMNIPNATAALQTLNGK 1069
Query: 92 PLAGNPLRIEFAK 104
L +R+ + K
Sbjct: 1070 KLGDTIVRVNYGK 1082
>gi|348683415|gb|EGZ23230.1| hypothetical protein PHYSODRAFT_556082 [Phytophthora sojae]
Length = 222
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKALQG 90
++VGNL ++ E +L+D+F RFG + SV + P R +AFI + EEDA +++++ G
Sbjct: 3 RVFVGNLPEDVRERDLSDKFERFGRISSVRIKFPTRPPPFAFIAYDNEEDASDAVRSMHG 62
Query: 91 FPLAGNPLRIEFAK 104
L+G LR+E ++
Sbjct: 63 AMLSGCRLRVEMSR 76
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF---QPGRS---YAFINFKIEEDAIAS 84
P+R L+VG+L HN++E L D F + + S Q G + YA++NF +DA +
Sbjct: 31 PNRSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKA 90
Query: 85 MKALQGFPLAGNPLRIEFA 103
M+ L PL G P+RI F+
Sbjct: 91 MEVLNFTPLNGKPIRIMFS 109
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEEDAI 82
N P L+VGN+ +I EA+L + F FGELE V Q R Y F+ F+ A
Sbjct: 271 NQIPFHRLYVGNIHFSITEADLQNVFEPFGELEFVQLQKEEQGRSRGYGFVQFRDPNQAR 330
Query: 83 ASMKALQGFPLAGNPLRI 100
+++ + GF LAG P+R+
Sbjct: 331 EALEKMNGFDLAGRPIRV 348
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G N+ P L+VGN+ +I E +L + F FGELE V Q R Y F+ F+
Sbjct: 279 GHPNSVPFHRLYVGNIHFSITETDLQNVFEPFGELEFVQLQKDDSGRSRGYGFVQFRDAG 338
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 339 QAREALEKMNGFDLAGRPIRV 359
>gi|301606869|ref|XP_002933032.1| PREDICTED: putative RNA-binding protein 15-like isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301606871|ref|XP_002933033.1| PREDICTED: putative RNA-binding protein 15-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 836
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKI 77
R+H+ G P+ LWVG L + L +F RFG + + ++ G ++A+I ++
Sbjct: 367 RSHALKIGYGKVVPTNRLWVGGLGPWVPVTALAREFDRFGTIRQIDYRKGENWAYIQYES 426
Query: 78 EEDAIASMKALQGFPLAGNP--LRIEFAKA 105
+ A A+ ++GFP+ G+ LR++FA+A
Sbjct: 427 LDAAQAACTQMRGFPMGGDHRRLRVDFAEA 456
>gi|195425606|ref|XP_002061087.1| GK10751 [Drosophila willistoni]
gi|194157172|gb|EDW72073.1| GK10751 [Drosophila willistoni]
Length = 798
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +W+G L L +F RFG ++ + +Q G YA+I ++ E A A+
Sbjct: 390 GYGKVTPATRMWIGGLGGWTSVTQLEREFDRFGAIKKIEYQKGDPYAYIQYETVEAATAA 449
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 450 VKEMRGFPLGGPERRLRTDFAE 471
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
RT N+ P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 264 RTTETTAAHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGF 323
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ ++ A +++ + GF LAG P+R+
Sbjct: 324 VQYREASQAREALEKMNGFDLAGRPIRV 351
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 19 THSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFI 73
+ + G N+ P L+VGN+ N+ E +L F FGELE V Q R Y F+
Sbjct: 271 SETATGAHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFV 330
Query: 74 NFKIEEDAIASMKALQGFPLAGNPLRI 100
++ A +++ + GF LAG P+R+
Sbjct: 331 QYREASQAREALEKMNGFDLAGRPIRV 357
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
RT N+ P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 264 RTTETTSAHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGF 323
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ ++ A +++ + GF LAG P+R+
Sbjct: 324 VQYREASQAREALEKMNGFDLAGRPIRV 351
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
+T S G + + P R L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 259 KTESTGTQQTSVPFHR-LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDSGRSRGYGF 317
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 318 VQFRDATQAREALEKMNGFDLAGRPIRV 345
>gi|403412344|emb|CCL99044.1| predicted protein [Fibroporia radiculosa]
Length = 599
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 23 GGGRANTPPS-------RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PGRS-- 69
G G N PP L+VG+L N+ E+++ F FGELE V GRS
Sbjct: 356 GDGNLNLPPGVSAPHGGMQLYVGSLHFNLTESDIKQVFEPFGELEFVDLHRDPMTGRSKG 415
Query: 70 YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
YAF+ +K EDA +++ ++GF LAG LR+
Sbjct: 416 YAFVQYKRAEDARMALEQMEGFELAGRTLRV 446
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G N+ P L+VGN+ +I E++L + F FGEL+ V Q R Y F+ F+
Sbjct: 296 GNQNSIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGRSRGYGFVQFRDPN 355
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 356 QAREALEKMNGFDLAGRPIRV 376
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS------YAFINFKIE 78
G + PS L++GNLS + + + F +G + V+ R + +++F +
Sbjct: 340 GDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQ 399
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
E+A A+++ALQG +AG PLR++FA
Sbjct: 400 EEATAALEALQGQDVAGRPLRVDFA 424
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMK 86
++L+VGNLS NI+E L +F FGE+ + GR+ + ++ F DA + K
Sbjct: 248 KNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAKAQK 307
Query: 87 ALQGFPLAGNPLRIEFA 103
+ + L G PL ++F+
Sbjct: 308 DMHEYELDGRPLNVDFS 324
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G N+ P L+VGN+ +I E++L + F FGEL+ V Q R Y F+ F+
Sbjct: 298 GNQNSIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGRSRGYGFVQFRDPN 357
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 358 QAREALEKMNGFDLAGRPIRV 378
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G N+ P L+VGN+ +I E++L + F FGEL+ V Q R Y F+ F+
Sbjct: 287 GNQNSIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQKDENGRSRGYGFVQFRDPN 346
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 347 QAREALEKMNGFDLAGRPIRV 367
>gi|428182228|gb|EKX51089.1| hypothetical protein GUITHDRAFT_161608 [Guillardia theta CCMP2712]
Length = 258
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VG+LS + E +L D+F RFG++ ++ + G +AF+ + EDA +++ + G L
Sbjct: 7 VYVGHLSSRVRERDLDDEFSRFGKIRDISLKQG--FAFVEYDHSEDAEYAVRKMDGVNLE 64
Query: 95 GNPLRIEFAK 104
G + +EFAK
Sbjct: 65 GMRILVEFAK 74
>gi|405120012|gb|AFR94783.1| pumilio domain-containing protein c [Cryptococcus neoformans var.
grubii H99]
Length = 1266
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 6 GRERFRGGRFEDRTHSGGGGR-----ANTP--PSRHLWVGNLSHNIEEANLTDQFLRFGE 58
R+ R GR +H+ G ++TP P+R LW+GNL N L F +G
Sbjct: 394 SRDSSRAGRLSISSHTSRTGTPEDKGSSTPQVPTRSLWIGNLDVNATSNALLQVFAPYGA 453
Query: 59 LESVAFQPGRSYAFINFKIEEDAI 82
+ESV P ++ AF+NF + DAI
Sbjct: 454 IESVRMLPEKTCAFVNFMDKVDAI 477
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ + L F FG +ES + F+NF+ + A+++ AL G
Sbjct: 580 PTRALWIGSIPSTTSASTLLQIFTPFGPVESSRVLQNKCCGFVNFERLDSAVSARNALNG 639
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ P+RI FA+
Sbjct: 640 RDILGSDVGPIRIGFARV 657
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G N+ P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 262 RNPEASGPHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDENGRSRGYGF 321
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 322 VQFRDAGQAREALEKMNGFDLAGRPIRV 349
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G N+ P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 262 RNPEASGPHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDENGRSRGYGF 321
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 322 VQFRDAGQAREALEKMNGFDLAGRPIRV 349
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G N+ P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 262 RNPEASGPHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDENGRSRGYGF 321
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 322 VQFRDAGQAREALEKMNGFDLAGRPIRV 349
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G N+ P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 262 RNPEASGPHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDENGRSRGYGF 321
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 322 VQFRDAGQAREALEKMNGFDLAGRPIRV 349
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
+T S G + + P R L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 259 KTESTGTQQTSVPFHR-LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDSGRSRGYGF 317
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 318 VQFRDATQAREALEKMNGFDLAGRPIRV 345
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G + P L+VGN+ +I E++L + F FGELE V Q R Y F+ F+ +
Sbjct: 302 GNSTGVPFHRLYVGNIHFSITESDLRNVFEPFGELEFVQLQKDDTGRSRGYGFVQFRDSD 361
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 362 QAREALEKMNGFDLAGRPIRV 382
>gi|328774281|gb|EGF84318.1| hypothetical protein BATDEDRAFT_34237 [Batrachochytrium
dendrobatidis JAM81]
Length = 1281
Score = 55.1 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PSR LWVGN+ + A+L F FG +ES+ P + AFINF EDA+ + + + G
Sbjct: 463 PSRSLWVGNIDALMSSADLHVIFSPFGLIESIRMLPEKECAFINFMNIEDAVVARQQMHG 522
Query: 91 FPLAGNPLRIEFAKA 105
+ N +R F K+
Sbjct: 523 GRIRNNIVRAGFGKS 537
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 6 GRERFRGGRFEDRTHSGGGGRAN--------TPPSRHLWVGNLSHNIEEANLTDQFLRFG 57
R++ GGR + G G+++ T P++ +W+GN+S A L F FG
Sbjct: 516 ARQQMHGGRIRNNIVRAGFGKSDPGTTEVHGTQPTKSIWIGNISPTTNPAALEGIFSCFG 575
Query: 58 ELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
++ES ++ F+NF +DAI + + + G ++I FAK
Sbjct: 576 QVESARVLTHKNCGFVNFVHVQDAIRARNEMNNQDIGGFVVKIGFAK 622
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 17 DRTHSGGGGRANTPPS-------RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---- 65
+R H G G N PP L+VG+L N+ E+++ F FGELE V
Sbjct: 376 NRLHPGDGN-LNLPPGVSAPHGGMQLYVGSLHFNLSESDIKQVFEPFGELEFVDLHRDPV 434
Query: 66 PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS YAF+ +K EDA +++ + GF LAG LR+
Sbjct: 435 TGRSKGYAFVQYKRAEDAKMALEQMDGFELAGRTLRV 471
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G N+ P L+VGN+ +I E++L F FGEL+ V Q R Y F+ F+
Sbjct: 281 GNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPN 340
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 341 QAREALEKMNGFDLAGRPIRV 361
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G N+ P L+VGN+ +I E++L F FGEL+ V Q R Y F+ F+
Sbjct: 282 GNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPN 341
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 342 QAREALEKMNGFDLAGRPIRV 362
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
+T S G + + P R L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 259 KTESTGTQQTSVPFHR-LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDSGRSRGYGF 317
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 318 VQFRDATQAREALEKMNGFDLAGRPIRV 345
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
RT N P L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 262 RTAEPASNNPNQIPFHRLYVGNIHFSITEGDLQNVFEPFGELEFVQLQKEDQGRSRGYGF 321
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 322 VQFRDPHQAREALEKMNGFDLAGRPIRV 349
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G N+ P L+VGN+ +I E++L F FGEL+ V Q R Y F+ F+
Sbjct: 282 GNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPN 341
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 342 QAREALEKMNGFDLAGRPIRV 362
>gi|330800147|ref|XP_003288100.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
gi|325081861|gb|EGC35362.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
Length = 297
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGEL--ESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
L++G LS + E +L D F ++G + V GR YAFI +K ++DA ++KAL G
Sbjct: 3 LYIGRLSTDTTERHLNDHFSKYGTITRNDVKRSNGRCYAFIEYKEKKDADDALKALNGTT 62
Query: 93 LAGNPLRIEFAK 104
L + + +E+AK
Sbjct: 63 LLNSKISVEWAK 74
>gi|327271017|ref|XP_003220284.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein
15-like [Anolis carolinensis]
Length = 1004
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A A+
Sbjct: 483 GYGKATPTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAQAA 542
Query: 85 MKALQGFPLAGNP--LRIEFA 103
++GFPL G LR++FA
Sbjct: 543 CTHMRGFPLGGPDRRLRVDFA 563
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL ++ +++L F RFG + V + P R +Y F+ F+ + A +
Sbjct: 409 NRTLFLGNLDISVTKSDLQRAFDRFGVITEVDLKRPTRGQTSTYGFVKFENLDMAHRAKL 468
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G L N ++I + KA
Sbjct: 469 AMSGKVLLCNTIKIGYGKA 487
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G N+ P L+VGN+ +I E++L F FGEL+ V Q R Y F+ F+
Sbjct: 293 GNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPN 352
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 353 QAREALEKMNGFDLAGRPIRV 373
>gi|323507800|emb|CBQ67671.1| related to JSN1-RNA-binding protein (pumilio family) [Sporisorium
reilianum SRZ2]
Length = 1333
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G N SR LW+G++ L F FG +ES+ +S AF+NF +DA+
Sbjct: 654 GAEPVNQEASRALWIGSIPSTTSTETLVSIFAPFGPIESIRVLASKSCAFVNFDRLDDAM 713
Query: 83 ASMKALQGFPLAGN---PLRIEFAKA 105
A+ KAL G + G P+RI FAK
Sbjct: 714 AARKALHGREVLGAEVGPVRIGFAKV 739
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
P+R LW+G+L + ++L R+G +E++ P +S AF+NF DA+
Sbjct: 539 PTRTLWIGHLRPTVTNSDLLQILTRYGSIETIRLVPEKSCAFVNFVEIADAV 590
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G N+ P L+VGN+ +I E++L F FGEL+ V Q R Y F+ F+
Sbjct: 280 GNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPN 339
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 340 QAREALEKMNGFDLAGRPIRV 360
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIE 78
G N+ P L+VGN+ +I E +L F FGELE V Q R Y F+ F+
Sbjct: 318 GHHPNSVPFHRLYVGNIHFSITETDLQHVFEPFGELEFVQLQKDENGRSRGYGFVQFRDA 377
Query: 79 EDAIASMKALQGFPLAGNPLRI 100
+A +++ + GF LAG P+R+
Sbjct: 378 ANAREALEKMNGFDLAGRPIRV 399
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G N+ P L+VGN+ +I E++L F FGEL+ V Q R Y F+ F+
Sbjct: 297 GNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPN 356
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 357 QAREALEKMNGFDLAGRPIRV 377
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEEDAI 82
N P L+VGN+ +I E++L + F FGELE V Q R Y F+ F+ A
Sbjct: 286 NQIPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKEEQGRSRGYGFVQFRDPSQAR 345
Query: 83 ASMKALQGFPLAGNPLRI 100
+++ + GF LAG P+R+
Sbjct: 346 EALEKMNGFDLAGRPIRV 363
>gi|296411655|ref|XP_002835545.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629331|emb|CAZ79702.1| unnamed protein product [Tuber melanosporum]
Length = 533
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R + N P L+VGN+ +I E++L + F FGELE V Q R Y F
Sbjct: 222 RVSAAEATTTNQIPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKEEGGRSRGYGF 281
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ ++ A +++ + GF LAG P+R+
Sbjct: 282 VQYRDPNQAREALEKMNGFDLAGRPIRV 309
>gi|281209169|gb|EFA83344.1| hypothetical protein PPL_04137 [Polysphondylium pallidum PN500]
Length = 664
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIA 83
G + PP ++LW+GN++ ++ E +L + F G++E V GR AF++F+ E AI
Sbjct: 223 GFDSQNPPCKNLWIGNVAMSVTEDSLRELFETVGKVEYVRVLTGRQCAFVSFQDVETAIL 282
Query: 84 SMKALQGFPLAGNPLRIEF 102
+ A+QG G L I F
Sbjct: 283 AKSAVQGRNFHGLNLAINF 301
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL 88
+ PSR +W GN + E + F FG ++ V P + Y+FI + +I + L
Sbjct: 140 SQPSRVIWAGNTHPDATEEEIRQMFGTFGYIKYVKLVPAKRYSFITYAELNSSIQAQYEL 199
Query: 89 QGFPLAGNPLRIEFAKA 105
G L G PL++ F KA
Sbjct: 200 NGAMLRGLPLKLGFGKA 216
>gi|443896159|dbj|GAC73503.1| RNA-binding protein [Pseudozyma antarctica T-34]
Length = 1243
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 22 GGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA 81
GG AN PSR LW+G++ L F FG +ESV +S AFINF+ EDA
Sbjct: 621 GGVEAANHEPSRALWIGSIPPTTSSDVLVSVFAPFGSIESVRVLSSKSCAFINFERTEDA 680
Query: 82 IASMKALQGFPLAGN---PLRIEFAKA 105
+ + K L G + G ++I FAK
Sbjct: 681 MTARKLLNGRDVLGPEVGAVKIGFAKV 707
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 27 ANTP---PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
+N+P P+R LW+G+L + L F +G +E+ P + AF+N+ DA+
Sbjct: 501 SNSPFLQPTRSLWIGHLRPTVTSQELVQAFSPYGAIETFRLVPEKGCAFVNYVDLADAV 559
>gi|348537600|ref|XP_003456281.1| PREDICTED: putative RNA-binding protein 15B-like [Oreochromis
niloticus]
Length = 909
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L A L +F RFG + ++ + G S+A+I ++ + A
Sbjct: 410 GYGKAN--PTTRLWVGGLGPGNSLAALAREFDRFGSIRNIDYVKGDSFAYIQYESLDAAQ 467
Query: 83 ASMKALQGFPLAGNP--LRIEFAKA 105
A+ ++GFPL G LR++FAK
Sbjct: 468 AACTQMRGFPLGGPERRLRVDFAKV 492
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 47/79 (59%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+ +L++GNL N+ EA L F ++G +E V + P R +YAF+ F+ + A +
Sbjct: 336 TSNLFIGNLDGNVTEAELRRGFDKYGIIEDVVIKRPSRGQGGAYAFVKFQNLDMAHRAKV 395
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+QG + GNP++I + KA
Sbjct: 396 AMQGRLIGGNPIKIGYGKA 414
>gi|50292159|ref|XP_448512.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527824|emb|CAG61473.1| unnamed protein product [Candida glabrata]
Length = 802
Score = 54.3 bits (129), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
A P + ++VG L ++E L F FG + S+ PG++ F+ F+ + DA A+++
Sbjct: 461 ATDPTNTTVFVGGLGPTVQEQQLRKIFQPFGNILSIKIPPGKNCGFVKFEHKIDAEAAIQ 520
Query: 87 ALQGFPLAGNPLRIEFAK 104
LQGF L NP+R+ + +
Sbjct: 521 GLQGFVLVENPIRLSWGR 538
>gi|348507889|ref|XP_003441488.1| PREDICTED: putative RNA-binding protein 15-like [Oreochromis
niloticus]
Length = 851
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PS LWVG L + A L +F RFG + ++ ++ G ++A+I ++ + A A ++G
Sbjct: 376 PSTRLWVGGLGPWVPLAALAKEFDRFGTIRTIDYRKGDAWAYIQYESLDAAQAGYTHMRG 435
Query: 91 FPLAGNP--LRIEFAKA 105
FPL G LR++FA+A
Sbjct: 436 FPLGGPDRRLRVDFAEA 452
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 14 RFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-----PGR 68
R ED RAN R L++GNL + E++L F RFG + V +
Sbjct: 282 RDEDMLSPEDDQRAN----RTLFLGNLDVTVTESDLRRAFDRFGVITEVDIKRTVRGQSN 337
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
+Y FI F+ + A + A+ G L +P++I + K
Sbjct: 338 TYGFIKFENLDMAHRAKVAMAGKILGHSPIKIGYGK 373
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEE 79
G N+ P L+VGN+ +I E++L F FGEL+ V Q R Y F+ F+
Sbjct: 297 GNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKEEGGRSRGYGFVQFRDPN 356
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG P+R+
Sbjct: 357 QAREALEKMNGFDLAGRPIRV 377
>gi|449490120|ref|XP_004186141.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein 15
[Taeniopygia guttata]
Length = 654
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A A+ ++G
Sbjct: 148 PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAQAACTHMRG 207
Query: 91 FPLAGNP--LRIEFA 103
FPL G LR++FA
Sbjct: 208 FPLGGPDRRLRVDFA 222
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEE 79
GR + +R L++GNL + E++L F RFG + V + PGR +Y F+ F+ +
Sbjct: 61 GRDDQRANRTLFLGNLDITVSESDLRRAFDRFGVITEVDIKRPGRGQTSTYGFLKFENLD 120
Query: 80 DAIASMKALQGFPLAGNPLRIEFAKA 105
A + A+ G L NP++I + KA
Sbjct: 121 MAHRAKLAMSGKVLLRNPIKIGYGKA 146
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEEDAI 82
N+ P L+VGN+ +I E +L + F FGELE V Q R Y F+ F+ A
Sbjct: 263 NSVPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDETGRSRGYGFVQFRDPNQAR 322
Query: 83 ASMKALQGFPLAGNPLRI 100
+++ + GF LAG P+R+
Sbjct: 323 EALEKMNGFDLAGRPIRV 340
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEEDAI 82
N P L+VGN+ +I E++L + F FGELE V Q R Y F+ F+ A
Sbjct: 271 NQIPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKEEQGRSRGYGFVQFRDPNQAR 330
Query: 83 ASMKALQGFPLAGNPLRI 100
+++ + GF LAG P+R+
Sbjct: 331 EALEKMNGFDLAGRPIRV 348
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP---GRS--YAF 72
R G ++N P L+VGN+ +I E +L + F FGELE V Q GRS Y F
Sbjct: 242 RNTEGTATQSNGIPFHRLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEEAGRSKGYGF 301
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F A +++ + GF LAG P+R+
Sbjct: 302 VQFIDPAQAKEALEKMNGFELAGRPIRV 329
>gi|212531765|ref|XP_002146039.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
gi|210071403|gb|EEA25492.1| RNA splicing factor (Pad-1), putative [Talaromyces marneffei ATCC
18224]
Length = 562
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G++ + P L+VGN+ +I E ++ + F FGELE V Q R Y F
Sbjct: 253 RNPEASSGQSASAPFHRLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDETGRSRGYGF 312
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 313 VQFRDPNQAREALEKMNGFDLAGRPIRV 340
>gi|409051610|gb|EKM61086.1| hypothetical protein PHACADRAFT_247456 [Phanerochaete carnosa
HHB-10118-sp]
Length = 584
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 15/96 (15%)
Query: 18 RTHSGGGGRANTPP---SRH----LWVGNLSHNIEEANLTDQFLRFGELESVAFQ----P 66
RTH+G + PP S H L+VG+L N+ E+++ F FGELE V
Sbjct: 338 RTHAGDS--LHLPPGVSSHHGGMQLYVGSLHFNLTESDIRQVFEPFGELEFVDLHRDPMT 395
Query: 67 GRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS YAF+ +K EDA +++ ++GF LAG LR+
Sbjct: 396 GRSKGYAFVQYKRGEDAKMALEQMEGFELAGRTLRV 431
>gi|61661314|gb|AAX51263.1| FPA [Arabidopsis thaliana]
Length = 1056
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + LWVG + N+ + +L ++F +FG++E F R AFI++ +DA+ + K++ G
Sbjct: 248 PCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQA-KSMNG 306
Query: 91 FPLAGNPLRIEFAKA 105
P+ G+ LR++F ++
Sbjct: 307 KPMGGSFLRVDFLRS 321
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +LWVG+L+ E++LT+ F R+G+++ + R +AFI ++ E+A+A+ +ALQG
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 92 PLAG 95
L G
Sbjct: 77 NLNG 80
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 20 HSGGGGRANTPPSRHLWVG---NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFK 76
HS + + PS+ LW+G + +E L + + FGE+E V P R++A + F+
Sbjct: 348 HSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFR 407
Query: 77 IEEDAIASMKALQG 90
E+A + LQG
Sbjct: 408 SAEEARQCKEGLQG 421
>gi|195026607|ref|XP_001986295.1| GH20604 [Drosophila grimshawi]
gi|193902295|gb|EDW01162.1| GH20604 [Drosophila grimshawi]
Length = 793
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +W+G L + +F RFG ++ + +Q G YA+I ++ E A ++
Sbjct: 388 GYGKVTPATRMWIGGLGAWTSVTQIEREFDRFGAIKKIEYQKGEPYAYIQYETVEAATSA 447
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
+K ++GFPL G LR +FA+
Sbjct: 448 VKEMRGFPLGGPERRLRTDFAE 469
>gi|2288985|gb|AAB64314.1| hypothetical protein [Arabidopsis thaliana]
Length = 1056
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + LWVG + N+ + +L ++F +FG++E F R AFI++ +DA+ + K++ G
Sbjct: 248 PCKSLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFLRERKTAFIDYYEMDDALQA-KSMNG 306
Query: 91 FPLAGNPLRIEFAKA 105
P+ G+ LR++F ++
Sbjct: 307 KPMGGSFLRVDFLRS 321
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +LWVG+L+ E++LT+ F R+G+++ + R +AFI ++ E+A+A+ +ALQG
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 92 PLAG 95
L G
Sbjct: 77 NLNG 80
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 20 HSGGGGRANTPPSRHLWVG---NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFK 76
HS + + PS+ LW+G + +E L + + FGE+E V P R++A + F+
Sbjct: 348 HSYEDFKGDVQPSKVLWIGFPPTATQCNDEQILHNAMILFGEIERVKSYPSRNFALVEFR 407
Query: 77 IEEDAIASMKALQG 90
E+A + LQG
Sbjct: 408 SAEEARQCKEGLQG 421
>gi|147901721|ref|NP_001084762.1| RNA binding motif protein 15 [Xenopus laevis]
gi|47125240|gb|AAH70824.1| MGC83913 protein [Xenopus laevis]
Length = 830
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKI 77
R+++ G P+ LWVG L + L +F RFG + + ++ G ++A+I ++
Sbjct: 365 RSYALKIGYGKVVPTNRLWVGGLGPWVPVTALAREFDRFGTIRQIDYRKGENWAYIQYES 424
Query: 78 EEDAIASMKALQGFPLAGNP--LRIEFAKA 105
+ A A+ ++GFPL G+ LR++FA+A
Sbjct: 425 LDAAQAACTQMRGFPLGGDHRRLRVDFAEA 454
>gi|134110564|ref|XP_776109.1| hypothetical protein CNBD1570 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258777|gb|EAL21462.1| hypothetical protein CNBD1570 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1268
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 6 GRERFRGGRFEDRTHSGGGGR-----ANTP--PSRHLWVGNLSHNIEEANLTDQFLRFGE 58
R+ R GR +H+ G ++TP P+R LW+GNL N L F +G
Sbjct: 397 SRDSSRAGRLSISSHTSRTGTPEDKGSSTPQVPTRSLWIGNLDVNATSNALFQVFAPYGA 456
Query: 59 LESVAFQPGRSYAFINFKIEEDAI 82
+ESV P ++ AF+NF + DAI
Sbjct: 457 IESVRMLPEKTCAFVNFMDKVDAI 480
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ + L F FG +ES + F+NF+ + A+++ AL G
Sbjct: 583 PTRALWIGSIPSTTSASTLLQIFTPFGPVESSRVLQNKCCGFVNFERLDSAVSARNALNG 642
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ P+RI FA+
Sbjct: 643 RDILGSDVGPIRIGFARV 660
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP---GRS--YAF 72
R G ++N P L+VGN+ +I E +L + F FGELE V Q GRS Y F
Sbjct: 305 RNTEGTATQSNGIPFHRLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEEAGRSKGYGF 364
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F A +++ + GF LAG P+R+
Sbjct: 365 VQFIDPTQAKEALEKMNGFELAGRPIRV 392
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R N+ P L+VGN+ N+ E +L F FGELE V Q R Y F
Sbjct: 267 RNPDSSNAHPNSVPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGF 326
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 327 VQFRDAGQAREALEKMNGFDLAGRPIRV 354
>gi|410899543|ref|XP_003963256.1| PREDICTED: putative RNA-binding protein 15-like [Takifugu rubripes]
Length = 845
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A PS LWVG L + A L +F RFG + ++ ++ G ++A+I ++ + A
Sbjct: 371 GYGKAT--PSTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGHTWAYIQYESLDAAQ 428
Query: 83 ASMKALQGFPLAG--NPLRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 429 AACTHMRGFPLGGPERRLRVDFA 451
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 14 RFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR---- 68
R ED RAN R L++GNL + EA+L F RFG + V + P R
Sbjct: 283 REEDFISPEDDQRAN----RTLFLGNLDITVTEADLRRAFDRFGVITEVDIKRPTRGQVS 338
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+Y F+ F+ + A + ++ G + NP++I + KA
Sbjct: 339 TYGFLKFENLDMAHRAKLSMSGKVVGRNPIKIGYGKA 375
>gi|402217675|gb|EJT97754.1| splicing factor CC1-like protein [Dacryopinax sp. DJM-731 SS1]
Length = 640
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 20 HSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PGRS--YAFI 73
H G A P S L+VG+L N+ E+++ F FGELE V GRS +AF+
Sbjct: 396 HLPPGVTAPPPGSMQLYVGSLHFNLTESDVKQVFEPFGELEFVDLHRDPLTGRSKGFAFV 455
Query: 74 NFKIEEDAIASMKALQGFPLAGNPLRI 100
+K EDA +++++ GF LAG L++
Sbjct: 456 QYKRSEDARMALQSMDGFDLAGRQLKV 482
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G++ + P L+VGN+ +I E ++ + F FGELE V Q R Y F
Sbjct: 253 RNPEASSGQSASAPFHRLYVGNIHFSITENDIQNVFEPFGELEFVQLQKDETGRSRGYGF 312
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG P+R+
Sbjct: 313 VQFRDPNQAREALEKMNGFDLAGRPIRV 340
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKIEEDAIASM 85
P L+VGN+ +I E++L + F FGELE V Q R Y F+ F+ A ++
Sbjct: 307 PFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKEEGGRSRGYGFVQFRDPAQAKEAL 366
Query: 86 KALQGFPLAGNPLRI 100
+ + GF LAG P+R+
Sbjct: 367 EKMNGFDLAGRPIRV 381
>gi|2815290|emb|CAA05719.1| P23 protein [Chironomus tentans]
gi|3954793|emb|CAA06034.1| hnRNP protein [Chironomus tentans]
Length = 191
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRSYAFINFKIEEDAIASMKALQGF 91
++VGNL+ +++ L ++F RFG+L SV PG +AFI F +++AI++ +L G
Sbjct: 9 VYVGNLTDKVKKEQLEEEFTRFGKLNSVWLAHNPPG--FAFIEFANKDEAISACDSLNGQ 66
Query: 92 PLAGNPLRIEFAK 104
L G+ LR+E +K
Sbjct: 67 ELLGSKLRVEISK 79
>gi|47228760|emb|CAG07492.1| unnamed protein product [Tetraodon nigroviridis]
Length = 841
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A PS LWVG L + A L +F RFG + ++ ++ G ++A+I ++ + A
Sbjct: 371 GYGKAT--PSTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGHTWAYIQYESLDAAQ 428
Query: 83 ASMKALQGFPLAG--NPLRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 429 AACTHMRGFPLGGPERRLRVDFA 451
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 14 RFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR---- 68
R ED RAN R L++GNL + EA+L F RFG + V + P R
Sbjct: 283 REEDFISPEDDQRAN----RTLFLGNLDITVTEADLRRAFDRFGVITEVDIKRPTRGQVS 338
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+Y F+ F+ + A + ++ G + NP++I + KA
Sbjct: 339 TYGFLKFENLDMAHRAKLSMSGKVVGRNPIKIGYGKA 375
>gi|291244948|ref|XP_002742355.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 922
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 43/68 (63%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
LW+GN+ + E ++ + F ++G+L+SV P + F+N+K ++ A +M+ALQG +
Sbjct: 738 LWIGNVLPKVTEKDIREAFGKYGQLQSVRMLPEKFCVFVNYKRKDSASKAMEALQGLEMQ 797
Query: 95 GNPLRIEF 102
G + I+F
Sbjct: 798 GQRILIKF 805
>gi|363743160|ref|XP_003642784.1| PREDICTED: putative RNA-binding protein 15-like [Gallus gallus]
Length = 889
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 372 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAQ 429
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 430 AACTHMRGFPLGGPDRRLRVDFA 452
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E +L F RFG + V + PGR +Y F+ F+ + A +
Sbjct: 298 NRTLFLGNLDITVSETDLRRAFDRFGVITEVDIKRPGRGQTSTYGFLKFENLDMAHRAKL 357
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G L NP++I + KA
Sbjct: 358 AMSGKVLLRNPIKIGYGKA 376
>gi|326433655|gb|EGD79225.1| splicing factor [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R ++VGNL ++I E + D F +FG +E + + YAF++F+ DA +++ G+
Sbjct: 4 RRIYVGNLPYDIREREIDDLFYKFGRIEEITIKG--PYAFVSFEDSRDAEDAVRRRDGYE 61
Query: 93 LAGNPLRIEFA 103
G LR+EFA
Sbjct: 62 FGGGRLRVEFA 72
>gi|71003490|ref|XP_756415.1| hypothetical protein UM00268.1 [Ustilago maydis 521]
gi|46095793|gb|EAK81026.1| hypothetical protein UM00268.1 [Ustilago maydis 521]
Length = 2031
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKA 87
N PSR LW+G++ + L F FG +ESV +S AFIN++ +DA+ + +
Sbjct: 659 NQEPSRALWIGSIPSSTSIETLISIFAPFGPIESVRVLASKSCAFINYERLDDAMVARQT 718
Query: 88 LQGFPLAGN---PLRIEFAKA 105
L G + G P+RI FAK
Sbjct: 719 LHGRDVLGAELGPVRIGFAKV 739
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 27 ANTP---PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
AN+P P+R LW+G+L + ++L F R+G +E+V P +S AFIN+ DA+
Sbjct: 533 ANSPFVQPTRTLWIGHLRPTVTSSDLVHIFSRYGSIETVRLVPEKSCAFINYADLADAV 591
>gi|421994878|emb|CCM44540.1| spen-like protein [Oryza sativa Japonica Group x Oryza sativa
Indica Group]
Length = 900
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG-RSYAFINFKIEEDAIASMKAL 88
P + LWVGNL E ++ F G L+ V + G RSYAF+ F+ +A A++ AL
Sbjct: 43 PETNTLWVGNLPAQAAEDDVMASFSPHGALDCVMARAGPRSYAFVLFRSVPEARAALDAL 102
Query: 89 QGFPLAGNPLRIEFAK 104
QG + G+ +R+EFA+
Sbjct: 103 QGSKVKGSVVRLEFAR 118
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 49/73 (67%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++LWVG +S +I + L ++F +FG+++ +AF ++ A+I+F EDAI++ +AL G
Sbjct: 124 KNLWVGGISSSISKEELEEEFKKFGKVDGIAFSRDQTSAYIDFDKLEDAISAHRALNGRV 183
Query: 93 LAGNPLRIEFAKA 105
L G L ++F ++
Sbjct: 184 LGGQELCVDFQRS 196
>gi|115480155|ref|NP_001063671.1| Os09g0516300 [Oryza sativa Japonica Group]
gi|50725369|dbj|BAD34441.1| unknown protein [Oryza sativa Japonica Group]
gi|50726245|dbj|BAD33821.1| unknown protein [Oryza sativa Japonica Group]
gi|113631904|dbj|BAF25585.1| Os09g0516300 [Oryza sativa Japonica Group]
gi|215694475|dbj|BAG89424.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 900
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG-RSYAFINFKIEEDAIASMKAL 88
P + LWVGNL E ++ F G L+ V + G RSYAF+ F+ +A A++ AL
Sbjct: 43 PETNTLWVGNLPAQAAEDDVMASFSPHGALDCVMARAGPRSYAFVLFRSVPEARAALDAL 102
Query: 89 QGFPLAGNPLRIEFAK 104
QG + G+ +R+EFA+
Sbjct: 103 QGSKVKGSVVRLEFAR 118
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 49/73 (67%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++LWVG +S +I + L ++F +FG+++ +AF ++ A+I+F EDAI++ +AL G
Sbjct: 124 KNLWVGGISSSISKEELEEEFKKFGKVDGIAFSRDQTSAYIDFDKLEDAISAHRALNGRV 183
Query: 93 LAGNPLRIEFAKA 105
L G L ++F ++
Sbjct: 184 LGGQELCVDFQRS 196
>gi|348588329|ref|XP_003479919.1| PREDICTED: putative RNA-binding protein 15B-like [Cavia porcellus]
Length = 670
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A+ P+ LWVG L N A L +F RFG + ++ G ++A+I ++ + A
Sbjct: 205 GPGKAS--PTTRLWVGGLGPNTSLATLAREFDRFGIIRTIDHVKGDTFAYIQYESLDAAQ 262
Query: 83 ASMKALQGFPLAG--NPLRIEFAKA 105
+ ++GFPL G LR++FAK
Sbjct: 263 VACAQMRGFPLGGPHRRLRVDFAKT 287
>gi|449271637|gb|EMC81921.1| Putative RNA-binding protein 15, partial [Columba livia]
Length = 568
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 82 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAQ 139
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 140 AACTHMRGFPLGGPDRRLRVDFA 162
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + PGR +Y F+ F+ + A +
Sbjct: 8 NRTLFLGNLDITVSESDLRRAFDRFGVITEVDIKRPGRGQTSTYGFLKFENLDMAHRAKL 67
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G L NP++I + KA
Sbjct: 68 AMSGKVLLRNPIKIGYGKA 86
>gi|384491365|gb|EIE82561.1| hypothetical protein RO3G_07266 [Rhizopus delemar RA 99-880]
Length = 837
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL-- 88
PSR LWVG L I + L + F +FG +ES+ P R AFIN+ E+A+ + AL
Sbjct: 224 PSRSLWVGQLDPTITKNELNNLFSKFGTIESIRILPDRECAFINYFGVEEALRARDALVN 283
Query: 89 -QGFPLAGNPLRIEFAK 104
G L ++I F K
Sbjct: 284 KMGCQLGNTTVKIGFGK 300
>gi|427779509|gb|JAA55206.1| Putative heat shock protein [Rhipicephalus pulchellus]
Length = 468
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R LWVGN+ + E LTD F R+G++ S+ R AFIN+ + +M+ALQG
Sbjct: 314 RSLWVGNIQPEVTEKMLTDLFRRYGDVHSIRILHDRHCAFINYGNKLSPGKAMEALQGHV 373
Query: 93 LAGNPLRIEF 102
L G + I F
Sbjct: 374 LCGTAILIRF 383
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRS--YAFINFKIEE 79
G A T P + L++GNL NI+E +L F FG +E + Q GRS Y F+ ++
Sbjct: 226 GNAGTGPCK-LYIGNLHPNIQEQDLKQVFEAFGAVEYITLQKDPTGRSQGYGFVQYQTTP 284
Query: 80 DAIASMKALQGFPLAGNPLRIEFA 103
DA +M+ L G +AG+ + ++ A
Sbjct: 285 DATKAMQQLDGLDIAGSQISVKIA 308
>gi|111226239|ref|XP_001134500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970421|gb|EAS66817.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 312
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGEL--ESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
L++G LS + NL D F ++G + V GR YAF+ +K DA ++KAL G
Sbjct: 3 LYIGRLSVETTQKNLNDHFSKYGTITRNDVKKTNGRCYAFVEYKERRDADDALKALNGTT 62
Query: 93 LAGNPLRIEFAK 104
L + + +E+AK
Sbjct: 63 LLNSKISVEWAK 74
>gi|218202458|gb|EEC84885.1| hypothetical protein OsI_32043 [Oryza sativa Indica Group]
Length = 900
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG-RSYAFINFKIEEDAIASMKAL 88
P + LWVGNL E ++ F G L+ V + G RSYAF+ F+ +A A++ AL
Sbjct: 43 PETNTLWVGNLPAQAAEDDVMAAFSPHGALDCVMARAGPRSYAFVLFRSVPEARAALDAL 102
Query: 89 QGFPLAGNPLRIEFAK 104
QG + G+ +R+EFA+
Sbjct: 103 QGSKVKGSVVRLEFAR 118
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 49/73 (67%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++LWVG +S +I + L ++F +FG+++ +AF ++ A+I+F EDAI++ +AL G
Sbjct: 124 KNLWVGGISSSISKEELEEEFKKFGKVDGIAFSRDQTSAYIDFDKLEDAISAHRALNGRV 183
Query: 93 LAGNPLRIEFAKA 105
L G L ++F ++
Sbjct: 184 LGGQELCVDFQRS 196
>gi|417413205|gb|JAA52945.1| Putative large rna-binding protein rrm superfamily, partial
[Desmodus rotundus]
Length = 944
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 435 GYGKAT--PTTRLWVGGLGSWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 492
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 493 AAWTHMRGFPLGGPDRRLRVDFA 515
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 361 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 420
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 421 AMSGKIIIRNPIKIGYGKA 439
>gi|297833586|ref|XP_002884675.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
gi|297330515|gb|EFH60934.1| hypothetical protein ARALYDRAFT_317651 [Arabidopsis lyrata subsp.
lyrata]
Length = 142
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPG----RSYAFINFKIEEDAIASMKAL 88
L++G LS +++E +L D F FGE+ V A+ G R + F++F E DA+++ A+
Sbjct: 42 LFIGGLSCSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAM 101
Query: 89 QGFPLAGNPLRIEFA 103
G L G PLRI FA
Sbjct: 102 DGKGLLGRPLRISFA 116
>gi|403284224|ref|XP_003933478.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 970
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|302846481|ref|XP_002954777.1| hypothetical protein VOLCADRAFT_95588 [Volvox carteri f.
nagariensis]
gi|300259960|gb|EFJ44183.1| hypothetical protein VOLCADRAFT_95588 [Volvox carteri f.
nagariensis]
Length = 460
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PSRHLW+GN+ ++ + F RFG LESV PG+++AF+N+ + A+A+ L G
Sbjct: 57 PSRHLWLGNVPAESDKPEIERLFGRFGPLESVRVFPGKTFAFVNYLELQHAVAARMGLDG 116
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP---GRS--YAF 72
R G ++N P L+VGN+ +I E +L + F FGELE V Q GRS Y F
Sbjct: 331 RHTEGTATQSNGIPFHRLYVGNIHFSITEDDLKNVFEPFGELEFVQLQKEEQGRSKGYGF 390
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F A +++ + GF LAG P+R+
Sbjct: 391 VQFIDPAQAKEALEKMNGFELAGRPIRV 418
>gi|427781181|gb|JAA56042.1| Putative heat shock protein [Rhipicephalus pulchellus]
Length = 360
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R LWVGN+ + E LTD F R+G++ S+ R AFIN+ + +M+ALQG
Sbjct: 202 RSLWVGNIQPEVTEKMLTDLFRRYGDVHSIRILHDRHCAFINYGNKLSPGKAMEALQGHV 261
Query: 93 LAGNPLRIEF 102
L G + I F
Sbjct: 262 LCGTAILIRF 271
>gi|426216198|ref|XP_004002353.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein 15
[Ovis aries]
Length = 967
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 444 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 501
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 502 AAWTHMRGFPLGGPDRRLRVDFA 524
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 370 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 429
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 430 AMSGKIIIRNPIKIGYGKA 448
>gi|332237583|ref|XP_003267985.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Nomascus
leucogenys]
Length = 977
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|296208783|ref|XP_002751239.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Callithrix
jacchus]
Length = 970
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|390466316|ref|XP_003733563.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Callithrix
jacchus]
Length = 978
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|358411388|ref|XP_003582008.1| PREDICTED: putative RNA-binding protein 15 [Bos taurus]
gi|359063916|ref|XP_003585900.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Bos taurus]
Length = 971
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 448 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 505
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 506 AAWTHMRGFPLGGPDRRLRVDFA 528
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 374 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 433
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 434 AMSGKIIIRNPIKIGYGKA 452
>gi|395821533|ref|XP_003784092.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Otolemur
garnettii]
Length = 964
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|403284226|ref|XP_003933479.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 977
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|395821537|ref|XP_003784094.1| PREDICTED: putative RNA-binding protein 15 isoform 3 [Otolemur
garnettii]
Length = 960
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|334323885|ref|XP_001381969.2| PREDICTED: putative RNA-binding protein 15 [Monodelphis domestica]
Length = 959
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 445 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 502
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 503 AAWTHMRGFPLGGPDRRLRVDFA 525
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIE 78
G RAN R L++GNL + E++L F RFG + V + P R +Y F+ F+
Sbjct: 367 GQRAN----RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPTRGQTSTYGFLKFENL 422
Query: 79 EDAIASMKALQGFPLAGNPLRIEFAKA 105
+ + + A+ G + NP++I + KA
Sbjct: 423 DMSHRAKLAMSGKVIIRNPIKIGYGKA 449
>gi|395821535|ref|XP_003784093.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Otolemur
garnettii]
Length = 972
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|354506098|ref|XP_003515103.1| PREDICTED: putative RNA-binding protein 15-like [Cricetulus
griseus]
Length = 960
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 446 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 503
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 504 AAWTHMRGFPLGGPDRRLRVDFA 526
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 372 NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 431
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 432 AMSGKIIIRNPIKIGYGKA 450
>gi|402855599|ref|XP_003892407.1| PREDICTED: putative RNA-binding protein 15 [Papio anubis]
Length = 969
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|57088155|ref|XP_537035.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Canis lupus
familiaris]
Length = 969
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 446 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 503
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 504 AAWTHMRGFPLGGPDRRLRVDFA 526
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 372 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 431
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 432 AMSGKIIIRNPIKIGYGKA 450
>gi|338725325|ref|XP_003365115.1| PREDICTED: putative RNA-binding protein 15 isoform 3 [Equus
caballus]
Length = 971
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 448 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 505
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 506 AAWTHMRGFPLGGPDRRLRVDFA 528
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 374 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 433
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 434 AMSGKIIIRNPIKIGYGKA 452
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF---QPGRS---YAFINFKIEEDAIASMKAL 88
L+VG+L N+ E L D F + ++ SV Q RS Y ++NF +DA +MKAL
Sbjct: 47 LYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAMKAL 106
Query: 89 QGFPLAGNPLRIEFA 103
PL G P+RI F+
Sbjct: 107 NFTPLNGKPIRIMFS 121
>gi|109013397|ref|XP_001100087.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Macaca
mulatta]
Length = 969
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|30802064|gb|AAH51409.1| Rbm15 protein, partial [Mus musculus]
Length = 949
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 433 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 490
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 491 AAWTHMRGFPLGGPDRRLRVDFA 513
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 360 RTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 419
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 420 MSGKIIIRNPIKIGYGKA 437
>gi|14161369|gb|AAK54722.1|AF368062_1 putative RNA-binding motif protein 15 short form [Homo sapiens]
Length = 969
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|73959300|ref|XP_865906.1| PREDICTED: putative RNA-binding protein 15 isoform 3 [Canis lupus
familiaris]
Length = 957
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 446 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 503
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 504 AAWTHMRGFPLGGPDRRLRVDFA 526
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 373 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 432
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 433 MSGKIIIRNPIKIGYGKA 450
>gi|74147567|dbj|BAE38672.1| unnamed protein product [Mus musculus]
Length = 948
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 436 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 493
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 494 AAWTHMRGFPLGGPDRRLRVDFA 516
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 363 RTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 422
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 423 MSGKIIIRNPIKIGYGKA 440
>gi|73959298|ref|XP_865892.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Canis lupus
familiaris]
Length = 1042
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 446 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 503
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 504 AAWTHMRGFPLGGPDRRLRVDFA 526
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 372 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 431
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 432 AMSGKIIIRNPIKIGYGKA 450
>gi|332237581|ref|XP_003267984.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Nomascus
leucogenys]
Length = 969
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|297664148|ref|XP_002810514.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Pongo abelii]
Length = 969
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|358411386|ref|XP_614275.4| PREDICTED: putative RNA-binding protein 15 isoform 1 [Bos taurus]
gi|359063913|ref|XP_002686230.2| PREDICTED: putative RNA-binding protein 15 isoform 1 [Bos taurus]
Length = 958
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 448 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 505
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 506 AAWTHMRGFPLGGPDRRLRVDFA 528
Score = 38.9 bits (89), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 374 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 433
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 434 AMSGKIIIRNPIKIGYGKA 452
>gi|410967940|ref|XP_003990471.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Felis catus]
Length = 970
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|344275625|ref|XP_003409612.1| PREDICTED: putative RNA-binding protein 15 [Loxodonta africana]
Length = 968
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|14161371|gb|AAK54723.1| putative RNA-binding motif protein 15 short form plus alternative
exon [Homo sapiens]
Length = 977
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|325182043|emb|CCA16496.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 193
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAI 82
+ P +L+V NL+H + E L D F +FG LE + R +AF+ F+ DA
Sbjct: 25 SNPGNNLYVANLAHRVTETELNDLFAKFGRLEKCEVITDPISRESRGFAFVTFEDVRDAN 84
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
+++ L G + G +R+E A+
Sbjct: 85 DAVQELNGKDIQGRRIRVEHAR 106
>gi|301785870|ref|XP_002928350.1| PREDICTED: putative RNA-binding protein 15-like [Ailuropoda
melanoleuca]
Length = 970
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|335287222|ref|XP_003355304.1| PREDICTED: putative RNA-binding protein 15 [Sus scrofa]
Length = 959
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 448 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 505
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 506 AAWTHMRGFPLGGPDRRLRVDFA 528
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 374 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 433
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 434 AMSGKIIIRNPIKIGYGKA 452
>gi|440909660|gb|ELR59545.1| Putative RNA-binding protein 15, partial [Bos grunniens mutus]
Length = 990
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 448 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 505
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 506 AAWTHMRGFPLGGPDRRLRVDFA 528
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 374 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 433
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 434 AMSGKIIIRNPIKIGYGKA 452
>gi|74212055|dbj|BAE40192.1| unnamed protein product [Mus musculus]
Length = 949
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 433 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 490
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 491 AAWTHMRGFPLGGPDRRLRVDFA 513
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 360 RTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 419
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 420 MSGKIIIRNPIKIGYGKA 437
>gi|149708732|ref|XP_001496267.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Equus
caballus]
Length = 960
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 448 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 505
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 506 AAWTHMRGFPLGGPDRRLRVDFA 528
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 374 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 433
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 434 AMSGKIIIRNPIKIGYGKA 452
>gi|34784964|gb|AAH57038.1| Rbm15 protein, partial [Mus musculus]
Length = 953
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 437 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 494
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 495 AAWTHMRGFPLGGPDRRLRVDFA 517
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 364 RTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 423
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 424 MSGKIIIRNPIKIGYGKA 441
>gi|14161373|gb|AAK54724.1|AF368064_1 putative RNA-binding motif protein 15 long form [Homo sapiens]
Length = 957
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|431896472|gb|ELK05884.1| Putative RNA-binding protein 15 [Pteropus alecto]
Length = 947
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 404 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 461
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 462 AAWTHMRGFPLGGPDRRLRVDFA 484
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 330 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 389
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 390 AMSGKIIIRNPIKIGYGKA 408
>gi|338725322|ref|XP_003365114.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Equus
caballus]
Length = 958
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 448 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 505
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 506 AAWTHMRGFPLGGPDRRLRVDFA 528
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 374 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 433
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 434 AMSGKIIIRNPIKIGYGKA 452
>gi|335287224|ref|XP_003355305.1| PREDICTED: putative RNA-binding protein 15 [Sus scrofa]
Length = 972
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 448 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 505
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 506 AAWTHMRGFPLGGPDRRLRVDFA 528
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 374 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 433
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 434 AMSGKIIIRNPIKIGYGKA 452
>gi|281340783|gb|EFB16367.1| hypothetical protein PANDA_018274 [Ailuropoda melanoleuca]
Length = 956
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|60653225|gb|AAX29307.1| RNA binding motif protein 15 [synthetic construct]
Length = 934
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 403 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 460
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 461 AAWTHMRGFPLGGPDRRLRVDFA 483
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 329 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 388
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 389 AMSGKIIIRNPIKIGYGKA 407
>gi|73695234|gb|AAI03494.1| RBM15 protein [Homo sapiens]
Length = 969
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|124249066|ref|NP_001039272.1| RNA binding motif protein 15 [Mus musculus]
gi|111308226|gb|AAI20591.1| RNA binding motif protein 15 [Mus musculus]
gi|223459828|gb|AAI37742.1| RNA binding motif protein 15 [Mus musculus]
Length = 962
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 446 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 503
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 504 AAWTHMRGFPLGGPDRRLRVDFA 526
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 373 RTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 432
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 433 MSGKIIIRNPIKIGYGKA 450
>gi|355745517|gb|EHH50142.1| hypothetical protein EGM_00920, partial [Macaca fascicularis]
Length = 977
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|344258674|gb|EGW14778.1| Putative RNA-binding protein 15 [Cricetulus griseus]
Length = 912
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 402 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 459
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 460 AAWTHMRGFPLGGPDRRLRVDFA 482
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 328 NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 387
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 388 AMSGKIIIRNPIKIGYGKA 406
>gi|291398305|ref|XP_002715834.1| PREDICTED: RNA binding motif protein 15 [Oryctolagus cuniculus]
Length = 962
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|335287220|ref|XP_001929412.3| PREDICTED: putative RNA-binding protein 15 isoform 1 [Sus scrofa]
Length = 1006
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 448 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 505
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 506 AAWTHMRGFPLGGPDRRLRVDFA 528
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 374 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 433
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 434 AMSGKIIIRNPIKIGYGKA 452
>gi|109467371|ref|XP_001068152.1| PREDICTED: putative RNA-binding protein 15-like [Rattus norvegicus]
gi|392345990|ref|XP_003749428.1| PREDICTED: putative RNA-binding protein 15-like [Rattus norvegicus]
gi|149025632|gb|EDL81875.1| rCG28930, isoform CRA_b [Rattus norvegicus]
Length = 962
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 446 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 503
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 504 AAWTHMRGFPLGGPDRRLRVDFA 526
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 373 RTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKIA 432
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 433 MSGKIIIRNPIKIGYGKA 450
>gi|51593323|gb|AAH80828.1| Rbm15 protein, partial [Mus musculus]
Length = 946
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 430 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 487
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 488 AAWTHMRGFPLGGPDRRLRVDFA 510
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 357 RTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 416
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 417 MSGKIIIRNPIKIGYGKA 434
>gi|14140099|emb|CAC38861.1| one twenty two protein [Homo sapiens]
gi|119576842|gb|EAW56438.1| RNA binding motif protein 15, isoform CRA_a [Homo sapiens]
Length = 957
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|319996623|ref|NP_001188474.1| putative RNA-binding protein 15 isoform 2 [Homo sapiens]
gi|114559018|ref|XP_524800.2| PREDICTED: putative RNA-binding protein 15 isoform 2 [Pan
troglodytes]
gi|397478748|ref|XP_003810699.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Pan paniscus]
gi|14140100|emb|CAC38862.1| one twenty two protein [Homo sapiens]
gi|66990081|gb|AAH98140.1| RBM15 protein [Homo sapiens]
gi|73695337|gb|AAI03508.1| RBM15 protein [Homo sapiens]
gi|119576843|gb|EAW56439.1| RNA binding motif protein 15, isoform CRA_b [Homo sapiens]
Length = 969
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|410967944|ref|XP_003990473.1| PREDICTED: putative RNA-binding protein 15 isoform 3 [Felis catus]
Length = 958
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|150866559|ref|XP_001386201.2| hypothetical protein PICST_33568 [Scheffersomyces stipitis CBS
6054]
gi|149387815|gb|ABN68172.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 387
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 15 FEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ------PGR 68
FE R + + PPSR L+VGNLS + E NL + F GE+ + +
Sbjct: 209 FEGRPAAAVAPLSKNPPSRILFVGNLSFDTSEDNLEEHFRHCGEIVRIRMATFEDTGKCK 268
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEF 102
+AFI+FK E A++K+ L PLR+E+
Sbjct: 269 GFAFIDFKDETGPTAALKSKLAKKLINRPLRLEY 302
>gi|28958098|gb|AAH47479.1| RBM15 protein, partial [Homo sapiens]
Length = 959
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 437 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 494
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 495 AAWTHMRGFPLGGPDRRLRVDFA 517
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 363 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 422
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 423 AMSGKIIIRNPIKIGYGKA 441
>gi|351704318|gb|EHB07237.1| Putative RNA-binding protein 15 [Heterocephalus glaber]
Length = 913
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 404 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 461
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 462 AAWTHMRGFPLGGPDRRLRVDFA 484
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 331 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 390
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 391 MSGKIIIRNPIKIGYGKA 408
>gi|348587024|ref|XP_003479268.1| PREDICTED: LOW QUALITY PROTEIN: putative RNA-binding protein
15-like [Cavia porcellus]
Length = 961
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLKTAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|426330713|ref|XP_004026351.1| PREDICTED: putative RNA-binding protein 15 isoform 1 [Gorilla
gorilla gorilla]
Length = 969
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|410967942|ref|XP_003990472.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Felis catus]
Length = 982
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 12/95 (12%)
Query: 17 DRTHSGGGGRANTPPSRH-----LWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PG 67
+++H+G G + PP L+VG+L N+ E+++ F FGELE V G
Sbjct: 335 NKSHAGDGS-LHLPPGVTASGAILYVGSLHFNLTESDIKQVFEPFGELEFVDLHKDPMTG 393
Query: 68 RS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
RS YAF+ +K EDA +++ ++GF LAG LR+
Sbjct: 394 RSKGYAFVQYKRAEDARMALEQMEGFELAGRTLRV 428
>gi|118480583|tpg|DAA05818.1| TPA_exp: RNA binding motif protein 15 isoform L2 [Homo sapiens]
Length = 913
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 403 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 460
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 461 AAWTHMRGFPLGGPDRRLRVDFA 483
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 330 RTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 389
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 390 MSGKIIIRNPIKIGYGKA 407
>gi|60360206|dbj|BAD90348.1| mKIAA4257 protein [Mus musculus]
Length = 959
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + + A
Sbjct: 374 RTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKLA 433
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ G + NP++I + KA
Sbjct: 434 MSGKIIIRNPIKIGYGKA 451
>gi|47933339|ref|NP_073605.4| putative RNA-binding protein 15 isoform 1 [Homo sapiens]
gi|397478750|ref|XP_003810700.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Pan paniscus]
gi|32363506|sp|Q96T37.2|RBM15_HUMAN RecName: Full=Putative RNA-binding protein 15; AltName:
Full=One-twenty two protein 1; AltName: Full=RNA-binding
motif protein 15
gi|119576844|gb|EAW56440.1| RNA binding motif protein 15, isoform CRA_c [Homo sapiens]
Length = 977
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|157167923|ref|XP_001662905.1| hypothetical protein AaeL_AAEL002986 [Aedes aegypti]
gi|108881522|gb|EAT45747.1| AAEL002986-PA [Aedes aegypti]
Length = 1337
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S LWVG+LS +++ L+D F ++G++ S+ P R AFI +DA SM++L+
Sbjct: 473 STTLWVGHLSKLVQQEELSDTFGKYGDIVSIDLIPPRGCAFIVMNRRQDAYKSMQSLKNH 532
Query: 92 PLAGNPLRIEFA 103
+ G + I +A
Sbjct: 533 KMHGRTITISWA 544
>gi|10433990|dbj|BAB14088.1| unnamed protein product [Homo sapiens]
Length = 925
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 403 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 460
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 461 AAWTHMRGFPLGGPDRRLRVDFA 483
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 329 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 388
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 389 AMSGKIIIRNPIKIGYGKA 407
>gi|355558256|gb|EHH15036.1| hypothetical protein EGK_01068, partial [Macaca mulatta]
Length = 977
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E +L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTENDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|308483894|ref|XP_003104148.1| CRE-RSP-8 protein [Caenorhabditis remanei]
gi|308258456|gb|EFP02409.1| CRE-RSP-8 protein [Caenorhabditis remanei]
Length = 297
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF---QP---GRSYAFINFKIEE 79
R N PPS+ L V NLS + +L D F FGE++ +P R + FI FK+ E
Sbjct: 67 RENPPPSKCLGVFNLSSYTTDKDLRDVFGEFGEIDKCDLVYDRPSGNSRGFGFIYFKLIE 126
Query: 80 DAIASMKALQGFPLAGNPLRIEFA 103
DA A+ + L L G+ +R++++
Sbjct: 127 DATAAREKLCNTDLDGHKIRVDYS 150
>gi|296489432|tpg|DAA31545.1| TPA: OTT-MAL-like [Bos taurus]
Length = 992
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 448 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 505
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 506 AAWTHMRGFPLGGPDRRLRVDFA 528
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 374 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 433
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 434 AMSGKIIIRNPIKIGYGKA 452
>gi|426330715|ref|XP_004026352.1| PREDICTED: putative RNA-binding protein 15 isoform 2 [Gorilla
gorilla gorilla]
Length = 977
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 373 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 432
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 433 AMSGKIIIRNPIKIGYGKA 451
>gi|38565992|gb|AAH62316.1| RBM15 protein, partial [Homo sapiens]
gi|39644750|gb|AAH06397.2| RBM15 protein, partial [Homo sapiens]
Length = 957
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 427 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 484
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 485 AAWTHMRGFPLGGPDRRLRVDFA 507
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 353 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 412
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 413 AMSGKIIIRNPIKIGYGKA 431
>gi|60656279|gb|AAX32703.1| RNA binding motif protein 15 [synthetic construct]
Length = 933
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 403 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 460
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 461 AAWTHMRGFPLGGPDRRLRVDFA 483
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 329 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKL 388
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 389 AMSGKIIIRNPIKIGYGKA 407
>gi|432103939|gb|ELK30772.1| Putative RNA-binding protein 15 [Myotis davidii]
Length = 863
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 346 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 403
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 404 AAWTHMRGFPLGGPDRRLRVDFA 426
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E++L F RFG + V + P R +Y F+ F+ + + +
Sbjct: 272 NRTLFLGNLDITVTESDLRRAFDRFGVITEVDIKRPSRGQTSTYGFLKFENLDMSHRAKV 331
Query: 87 ALQGFPLAGNPLRIEFAKA 105
A+ G + NP++I + KA
Sbjct: 332 AMSGKIIIRNPIKIGYGKA 350
>gi|378728173|gb|EHY54632.1| hypothetical protein HMPREF1120_02799 [Exophiala dermatitidis
NIH/UT8656]
Length = 1172
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PSR LW+G++ ++ ++L F RFG +ES ++ F+NF+ E AI + L G
Sbjct: 441 PSRSLWIGSIPNSTTMSSLDAIFSRFGPIESTRVLTHKNCGFVNFESVEPAIRARHLLNG 500
Query: 91 ---FPLAGNPLRIEFAKA 105
FP AG P+RI FAKA
Sbjct: 501 QEIFPGAG-PVRIGFAKA 517
>gi|10438163|dbj|BAB15185.1| unnamed protein product [Homo sapiens]
Length = 532
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 22 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 79
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 80 AAWTHMRGFPLGGPDRRLRVDFA 102
>gi|126002576|ref|XP_001382208.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|195146834|ref|XP_002014389.1| GL18979 [Drosophila persimilis]
gi|54640338|gb|EAL29321.1| GA19037 [Drosophila pseudoobscura pseudoobscura]
gi|194106342|gb|EDW28385.1| GL18979 [Drosophila persimilis]
Length = 196
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ +++ +L +F ++G+L SV AF P +AF+ F+ +DA + L G
Sbjct: 12 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNP-PGFAFVEFEHRDDAEKACDILNGSE 70
Query: 93 LAGNPLRIEFAKA 105
L G+ LR+E +K
Sbjct: 71 LLGSQLRVEISKG 83
>gi|444724640|gb|ELW65239.1| Putative RNA-binding protein 15, partial [Tupaia chinensis]
Length = 1381
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 830 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 887
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 888 AAWTHMRGFPLGGPDRRLRVDFA 910
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 2 GRGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
G G G FR D RAN R L++GNL + E++L F RFG +
Sbjct: 733 GAGAGAAPFRE---VDEISPEDDQRAN----RTLFLGNLDITVTESDLRRAFDRFGVITE 785
Query: 62 VAFQ-PGR----SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
V + P R +Y F+ F+ + + + A+ G + NP++I + KA
Sbjct: 786 VDIKRPSRGQTSTYGFLKFENLDMSHRAKLAMSGKIIIRNPIKIGYGKA 834
>gi|298714075|emb|CBJ33838.1| similar to arginine/serine-rich splicing factor 7 [Ectocarpus
siliculosus]
Length = 249
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRSYAFINFKIEEDAIASMKA 87
P +WVGNL EE +L D+F +FGEL V PG +AF+ F + DA +++
Sbjct: 5 PGTKVWVGNLGSTCEERDLRDEFSKFGELNKVWVARNPPG--FAFVWFADDRDAGDAVRE 62
Query: 88 LQGFPLAGNPLRIEFA 103
+ G +AG R+E +
Sbjct: 63 IDGKSIAGREWRVEVS 78
>gi|365987806|ref|XP_003670734.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
gi|343769505|emb|CCD25491.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + + ++VG LS ++ E L + F FGE+ V G+ F+ FK DA A+
Sbjct: 300 GLGSNSKNSTIFVGGLSTDVSEQELNELFRPFGEIMDVKIPLGKKCGFVTFKRRIDAKAA 359
Query: 85 MKALQGFPLAGNPLRIEFAK 104
+K L GF + G P+R+ + K
Sbjct: 360 IKGLHGFLVRGCPIRLSWGK 379
>gi|221116369|ref|XP_002164038.1| PREDICTED: putative RNA-binding protein 15B-like [Hydra
magnipapillata]
Length = 620
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G T PS LW+G L H L +F RFG L + + G +AF+ F+ + A A+
Sbjct: 255 GYGKTQPSTRLWIGGLGHWCSSDLLNREFDRFGALRKIEYVKGSRHAFVEFESIDAASAA 314
Query: 85 MKALQGFPLAG--NPLRIEFAK 104
++GFPL G ++I++A+
Sbjct: 315 HTEMRGFPLGGPDRKIKIDYAE 336
>gi|430812058|emb|CCJ30513.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1021
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + P+R LW+ NL ++LT F +FG ES+ + Y F+N+ E AI +
Sbjct: 385 GDVMSQPTRSLWIINLPLTASNSSLTTLFSQFGVAESIWILADKKYGFVNYTRLESAIQA 444
Query: 85 MKALQG---FPLAGNPLRIEFAK 104
+L G FP +P+R+E+ K
Sbjct: 445 KASLDGKELFP-GNDPIRVEYIK 466
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS------YAFINFKIE 78
G + PS L++GNLS + + + F +G + V+ R + +++F +
Sbjct: 327 GDKRSAPSNTLFIGNLSFDCTNETIQEVFAEYGNVTRVSLPTDRDSGALKGFGYVDFGSQ 386
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
E+A A+++AL G +AG PLR++FA
Sbjct: 387 EEATAALEALHGQDVAGRPLRVDFA 411
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMK 86
++L+VGNLS NI+E L +F FGE+ + GR+ + ++ F DA + K
Sbjct: 235 KNLFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFAKAADAAKAQK 294
Query: 87 ALQGFPLAGNPLRIEFA 103
+ + L G PL ++F+
Sbjct: 295 DMHEYELDGRPLNVDFS 311
>gi|302804889|ref|XP_002984196.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
gi|300148045|gb|EFJ14706.1| hypothetical protein SELMODRAFT_119951 [Selaginella moellendorffii]
Length = 298
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL ++ E+ + D F ++G + + + P R YAFI F DA ++KA
Sbjct: 5 SRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKAR 64
Query: 89 QGFPLAGNPLRIEFAKA 105
G+ G+ LR+EFA +
Sbjct: 65 DGYVFDGHRLRVEFAHS 81
>gi|302781020|ref|XP_002972284.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
gi|300159751|gb|EFJ26370.1| hypothetical protein SELMODRAFT_97566 [Selaginella moellendorffii]
Length = 288
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL ++ E+ + D F ++G + + + P R YAFI F DA ++KA
Sbjct: 5 SRTIYVGNLPGDVRESEIDDLFYKYGRILDIDLKLPPRPPGYAFIEFDDPRDAEDAIKAR 64
Query: 89 QGFPLAGNPLRIEFAKA 105
G+ G+ LR+EFA +
Sbjct: 65 DGYVFDGHRLRVEFAHS 81
>gi|403376343|gb|EJY88148.1| hypothetical protein OXYTRI_18935 [Oxytricha trifallax]
Length = 208
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+VGN+S ++ + L D+F +FG S+ F+ SYAFI FK E DA ++ L G +
Sbjct: 3 LFVGNISRSMRQDELHDEFDKFGSC-SINFKG--SYAFIEFKDERDAEDALTELNGREFS 59
Query: 95 GNPLRIEFAK 104
G L IE++K
Sbjct: 60 GQRLAIEWSK 69
>gi|321472566|gb|EFX83536.1| hypothetical protein DAPPUDRAFT_194972 [Daphnia pulex]
Length = 366
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIAS 84
P R L+VG+L NI E L F FG++E + + GRS Y FI F+ EDA +
Sbjct: 109 PMR-LYVGSLHFNITEDMLRSIFEPFGKIEHMQLMIDTETGRSKGYGFITFRNAEDAKKA 167
Query: 85 MKALQGFPLAGNPLRI 100
M+ L GF LAG P++I
Sbjct: 168 MEQLNGFELAGRPMKI 183
>gi|195131747|ref|XP_002010307.1| GI14756 [Drosophila mojavensis]
gi|193908757|gb|EDW07624.1| GI14756 [Drosophila mojavensis]
Length = 325
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA-IASMKALQGFPL 93
L+VGNLS I EA L + F +GE+ SV P +SYAF+ + DA +A+ + L
Sbjct: 199 LYVGNLSEQISEAELLNVFYPYGEIRSVTLVPRQSYAFVQYFKRSDAELAAERTFSKLSL 258
Query: 94 AGNPLRIEFAK 104
G L I++A+
Sbjct: 259 KGRRLIIKWAR 269
>gi|406605166|emb|CCH43325.1| RNA-binding protein [Wickerhamomyces ciferrii]
Length = 380
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 15 FEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---R 68
FE R + + PPSR L+VGNLS + E L QF+ GEL + F+ +
Sbjct: 193 FEGRPNKEEAQLSKNPPSRILFVGNLSFDTTEEMLHRQFVHCGELIKIRMATFEDSGKCK 252
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEF 102
+AF++FK EE ++K L PLR+EF
Sbjct: 253 GFAFLDFKDEEGPTKALKDKSCKKLLNRPLRMEF 286
>gi|348514898|ref|XP_003444977.1| PREDICTED: putative RNA-binding protein 15-like [Oreochromis
niloticus]
Length = 855
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G ++A+I ++ + A
Sbjct: 377 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDTWAYIQYESLDAAQ 434
Query: 83 ASMKALQGFPLAG--NPLRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 435 AACTHMRGFPLGGPERRLRVDFA 457
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 14 RFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR---- 68
R ED RAN R L++GNL + EA+L F RFG + V + P R
Sbjct: 289 REEDFISPEDDQRAN----RTLFLGNLDITVAEADLRRAFDRFGVITEVDIKRPTRGQTS 344
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+Y F+ F+ + A + ++ G + NP++I + KA
Sbjct: 345 TYGFLKFENLDMAHRAKLSMSGKIVGRNPIKIGYGKA 381
>gi|410919661|ref|XP_003973302.1| PREDICTED: putative RNA-binding protein 15-like [Takifugu rubripes]
Length = 831
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PS LWVG L + A L +F RFG + ++ + +A+I ++ + A A+ ++G
Sbjct: 368 PSTRLWVGGLGPWVSLAALAKEFDRFGTIRTIDYTKDDVWAYIQYESLDAAQAACSHMRG 427
Query: 91 FPLAGNP--LRIEFAKA 105
FPL G LR++FA A
Sbjct: 428 FPLGGPDRRLRVDFADA 444
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKA 87
R L++GNL + E +L F RFG + V + P R +Y F+ F+ + A + A
Sbjct: 289 RTLFLGNLDVTVTENDLRRAFARFGMITEVDIKRPVRGQSNTYGFMKFENLDVAHRAKMA 348
Query: 88 LQGFPLAGNPLRIEFAK 104
+ G L +P++I + K
Sbjct: 349 MSGKMLGHSPIKIGYGK 365
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 27 ANTPPSRH--LWVGNLSHNIEEANLTD----QFLRFGELESVAFQPGRS----YAFINFK 76
A+TP S + L + L + + ++ D +F RFG+ V+ + GR AF+NF+
Sbjct: 105 ASTPDSEYKTLKISQLGSQLNDEDVEDGLFHEFKRFGD---VSIKIGRENDERVAFVNFR 161
Query: 77 IEEDAIASMKALQGFPLAGNPLRIE 101
+DA A+ A L PL+IE
Sbjct: 162 RPDDARAAKHARGKLVLYDRPLKIE 186
>gi|15231912|ref|NP_187457.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|6648212|gb|AAF21210.1|AC013483_34 putative RNA-binding protein [Arabidopsis thaliana]
gi|45752630|gb|AAS76213.1| At3g08000 [Arabidopsis thaliana]
gi|46359799|gb|AAS88763.1| At3g08000 [Arabidopsis thaliana]
gi|332641108|gb|AEE74629.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 143
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPG----RSYAFINFKIEEDAIASMKAL 88
L++G LS +++E +L D F FGE+ V A+ G R + F++F E DA+++ A+
Sbjct: 43 LFIGGLSWSVDEQSLKDAFSSFGEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAM 102
Query: 89 QGFPLAGNPLRIEFA 103
G L G PLRI FA
Sbjct: 103 DGKGLLGRPLRISFA 117
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 16/98 (16%)
Query: 17 DRTHSGGGGRANTPP--------SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ--P 66
+R H+G N PP + L+VG+L N+ E ++ F FGEL+ V P
Sbjct: 332 NRVHAGEN--LNLPPGVSAPQGGAMQLYVGSLHFNLTEQDIKQVFEPFGELDFVDLHRDP 389
Query: 67 G----RSYAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
G + YAF+ +K EDA +++ + GF LAG LR+
Sbjct: 390 GTGRSKGYAFVQYKRAEDAKMALEQMDGFELAGRTLRV 427
>gi|195119159|ref|XP_002004099.1| GI19446 [Drosophila mojavensis]
gi|193914674|gb|EDW13541.1| GI19446 [Drosophila mojavensis]
Length = 196
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ +++ +L +F ++G+L SV AF P +AF+ F+ +DA + L G
Sbjct: 9 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNP-PGFAFVEFEHRDDAEKACDILNGSE 67
Query: 93 LAGNPLRIEFAK 104
L G+ LR+E +K
Sbjct: 68 LLGSQLRVEISK 79
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 52.4 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKAL 88
L+VG+L NI E L F FG++ES+ R Y FI F EDA +M+ L
Sbjct: 329 LYVGSLHFNITEEMLRGIFEPFGKIESIQLLKDPETSRSRGYGFITFYNSEDAKRAMEQL 388
Query: 89 QGFPLAGNPLRI 100
GF LAG P+++
Sbjct: 389 NGFELAGRPMKV 400
>gi|430811846|emb|CCJ30702.1| unnamed protein product [Pneumocystis jirovecii]
Length = 486
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP------GRSYAFINFKI 77
GGR + P L+VGN+ N+ E +L F FGELE V Q R Y F+ ++
Sbjct: 217 GGRQSDAPFHRLYVGNIHFNLTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFVQYRD 276
Query: 78 EEDAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG +R+
Sbjct: 277 PAQARDALEKMNGFELAGRAIRV 299
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRS--YAFINFKIEEDAIASM 85
P L+VGN+ +I E++L + F FGEL+ V Q GRS Y F+ F+ A ++
Sbjct: 297 PFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREETGRSKGYGFVQFRDPNQAREAL 356
Query: 86 KALQGFPLAGNPLRI 100
+ + GF LAG P+R+
Sbjct: 357 EKMNGFDLAGRPIRV 371
>gi|170050233|ref|XP_001859912.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871912|gb|EDS35295.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1014
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S LWVG+LS +++ L+D F ++G++ S+ P R AFI +DA SM++L+
Sbjct: 516 STTLWVGHLSKLVQQEELSDTFGKYGDIVSIDLIPPRGCAFIVMNRRQDAHKSMQSLKNH 575
Query: 92 PLAGNPLRIEFA 103
+ G + I +A
Sbjct: 576 KMHGRTITISWA 587
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF-------QPGRSYAFINFKI 77
G + PS L++GNLS N + N+++ F +FGE+ SV QP + + ++ +
Sbjct: 257 GDVPSEPSETLFLGNLSFNADRDNISEMFSKFGEIVSVRIPTHPETEQP-KGFGYVQYTN 315
Query: 78 EEDAIASMKALQGFPLAGNPLRIEFA 103
EDA ++ ALQG + P+R++F+
Sbjct: 316 VEDAKKALDALQGEYIDNRPVRLDFS 341
>gi|70947892|ref|XP_743519.1| u1 small nuclear ribonucleoprotein a [Plasmodium chabaudi chabaudi]
gi|56523052|emb|CAH75488.1| u1 small nuclear ribonucleoprotein a, putative [Plasmodium chabaudi
chabaudi]
Length = 444
Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P R L+V N+ N+ D F F P R+ AF+++ E A ++MKALQ
Sbjct: 370 PYRILFVENVDENVNTEAFNDIFKAFSGFVEARIIPQRNVAFVDYTDESSATSAMKALQD 429
Query: 91 FPLAGNPLRIEFAK 104
+ L G+ L+I +AK
Sbjct: 430 YELQGSKLKISYAK 443
Score = 37.7 bits (86), Expect = 0.87, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 28 NTPPSRHLWVGNLSHNIE----EANLTDQFLRFGELESVAFQPG---RSYAFINFKIEED 80
N PP+ L+V NL+ I+ + +L + F ++G +E + + A+I + E
Sbjct: 158 NIPPNETLYVKNLNDKIKCEDMKKSLKNIFNQYGLIEDIIVMKSFWRKGQAWIVYDTIES 217
Query: 81 AIASMKALQGFPLAGNPLRIEFA 103
+ ++ ALQGF L G ++I ++
Sbjct: 218 STKALNALQGFVLFGKIMQINYS 240
>gi|302664299|ref|XP_003023781.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
gi|291187796|gb|EFE43163.1| hypothetical protein TRV_02070 [Trichophyton verrucosum HKI 0517]
Length = 592
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRS--YAFINFKIEEDAIASM 85
P L+VGN+ +I E++L + F FGEL+ V Q GRS Y F+ F+ A ++
Sbjct: 297 PFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREAL 356
Query: 86 KALQGFPLAGNPLRI 100
+ + GF LAG P+R+
Sbjct: 357 EKMNGFDLAGRPIRV 371
>gi|326485177|gb|EGE09187.1| RNA splicing factor [Trichophyton equinum CBS 127.97]
Length = 560
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRS--YAFINFKIEEDAIASM 85
P L+VGN+ +I E++L + F FGEL+ V Q GRS Y F+ F+ A ++
Sbjct: 265 PFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREAL 324
Query: 86 KALQGFPLAGNPLRI 100
+ + GF LAG P+R+
Sbjct: 325 EKMNGFDLAGRPIRV 339
>gi|47229632|emb|CAG06828.1| unnamed protein product [Tetraodon nigroviridis]
Length = 804
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PS LWVG L + A L +F RFG + ++ + +A+I ++ + A A+ ++G
Sbjct: 357 PSTRLWVGGLGPWVSLAALAKEFDRFGTIRTIDYAKDDVWAYIQYESLDAAQAACTHMRG 416
Query: 91 FPLAGNP--LRIEFAKA 105
FPL G LR++FA A
Sbjct: 417 FPLGGPDRRLRVDFADA 433
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMK 86
+R L++GNL + E +L F RFG + V + P R +Y FI F+ + A +
Sbjct: 277 TRTLFLGNLDITLTENDLRRAFARFGMITEVDIKRPARGQSNTYGFIKFENLDVAHRAKM 336
Query: 87 ALQGFPLAGNPLRIEFAK 104
+ G L +P++I + K
Sbjct: 337 VMSGKVLGHSPIKIGYGK 354
>gi|347969782|ref|XP_314272.5| AGAP003369-PA [Anopheles gambiae str. PEST]
gi|333469268|gb|EAA09643.5| AGAP003369-PA [Anopheles gambiae str. PEST]
Length = 1392
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S LWVG+LS +++ L+D F ++G++ S+ P R AFI +DA M++L+
Sbjct: 454 STTLWVGHLSKLVQQEELSDTFGKYGDIVSIDMIPPRGCAFIVMNRRQDAFKCMQSLKNH 513
Query: 92 PLAGNPLRIEFA 103
+ G + I +A
Sbjct: 514 KMHGRTITISWA 525
>gi|432864864|ref|XP_004070455.1| PREDICTED: putative RNA-binding protein 15-like [Oryzias latipes]
Length = 845
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G ++A+I ++ + A
Sbjct: 372 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDTWAYIQYESLDAAQ 429
Query: 83 ASMKALQGFPLAG--NPLRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 430 AAWTHMRGFPLGGPERRLRVDFA 452
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 9/97 (9%)
Query: 14 RFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR---- 68
R ED RAN R L++GNL NI EA+L F RFG + V + P R
Sbjct: 284 REEDLISPEDDQRAN----RTLFLGNLDINIAEADLRRAFDRFGVITEVDIKRPSRGQTS 339
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+Y F+ F+ + A + ++ G + NP++I + KA
Sbjct: 340 TYGFLKFENLDMAHRAKLSMSGKIVGRNPIKIGYGKA 376
>gi|432857215|ref|XP_004068586.1| PREDICTED: putative RNA-binding protein 15-like [Oryzias latipes]
Length = 824
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+ LWVG L + L +F RFG + ++ ++ G ++A+I ++ + A A+ ++G
Sbjct: 364 PTTRLWVGGLGPWVPLTALAKEFDRFGTIRTIDYRKGEAWAYIQYESLDAAQAACSHMRG 423
Query: 91 FPLAGNP--LRIEFA 103
FPL G LR++FA
Sbjct: 424 FPLGGPDRRLRVDFA 438
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-----PGRSYAFINFKIEEDAIASMK 86
+R L++GNL ++ E++L F RFG + V + +Y FI F+ + A +
Sbjct: 284 NRTLFLGNLDVSVTESDLRRAFDRFGVITEVDIKRPVKGQSNTYGFIKFENLDMAHRAKV 343
Query: 87 ALQGFPLAGNPLRIEFAK 104
A+ G L +P++I + K
Sbjct: 344 AMSGKILGHSPVKIGYGK 361
>gi|347969784|ref|XP_003436461.1| AGAP003369-PB [Anopheles gambiae str. PEST]
gi|333469269|gb|EGK97234.1| AGAP003369-PB [Anopheles gambiae str. PEST]
Length = 1272
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S LWVG+LS +++ L+D F ++G++ S+ P R AFI +DA M++L+
Sbjct: 334 STTLWVGHLSKLVQQEELSDTFGKYGDIVSIDMIPPRGCAFIVMNRRQDAFKCMQSLKNH 393
Query: 92 PLAGNPLRIEFA 103
+ G + I +A
Sbjct: 394 KMHGRTITISWA 405
>gi|367016893|ref|XP_003682945.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
gi|359750608|emb|CCE93734.1| hypothetical protein TDEL_0G03670 [Torulaspora delbrueckii]
Length = 617
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 29 TPPSRH-LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKA 87
TPP+ +++G L+ I EA L F FG + +V G++ F+ ++ DA A+++
Sbjct: 381 TPPNNTTVFIGGLTPKINEAQLQALFSPFGNILTVKIPQGKNCGFVKYENRIDAEAAIQG 440
Query: 88 LQGFPLAGNPLRIEFAK 104
+QGF + GNP+R+ + +
Sbjct: 441 MQGFIVGGNPVRLSWGR 457
>gi|195053219|ref|XP_001993524.1| GH13017 [Drosophila grimshawi]
gi|193900583|gb|EDV99449.1| GH13017 [Drosophila grimshawi]
Length = 201
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ +++ +L +F ++G+L SV AF P +AF+ F+ +DA + L G
Sbjct: 9 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPP-GFAFVEFEHRDDAEKACDILNGSE 67
Query: 93 LAGNPLRIEFAK 104
L G+ LR+E +K
Sbjct: 68 LLGSQLRVEISK 79
>gi|443689765|gb|ELT92082.1| hypothetical protein CAPTEDRAFT_136516 [Capitella teleta]
Length = 554
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PS LWVG L + L +F RFG + + + G+S+A++ + + A A++K ++G
Sbjct: 192 PSPCLWVGGLGQWLSAEVLEREFDRFGVIHRIEWPHGKSFAYVLYDNIDAATAALKDMRG 251
Query: 91 FPLAGNP--LRIEFAKA 105
FPL G+ LR++FA
Sbjct: 252 FPLGGSDHRLRVDFADV 268
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF---QPGRSYAFINF 75
+R L+VGNL I +A+L F R+G +E V Q G +YAFI F
Sbjct: 114 TRTLFVGNLDIEITDADLRGVFERYGTVEDVDIKRPQQGNAYAFIKF 160
>gi|68074359|ref|XP_679094.1| u1 small nuclear ribonucleoprotein a [Plasmodium berghei strain
ANKA]
gi|56499751|emb|CAH97936.1| u1 small nuclear ribonucleoprotein a, putative [Plasmodium berghei]
Length = 371
Score = 52.0 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 28 NTP--PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASM 85
N P P + L+V N+ N+ D F F P R+ AF+++ E A ++M
Sbjct: 292 NNPVIPYKILFVENVDENVNTEAFNDIFKAFSGFVEARIIPQRNVAFVDYTDESSATSAM 351
Query: 86 KALQGFPLAGNPLRIEFAK 104
KALQ + L G+ L+I +AK
Sbjct: 352 KALQNYELQGSKLKISYAK 370
>gi|326471726|gb|EGD95735.1| RNA splicing factor [Trichophyton tonsurans CBS 112818]
Length = 592
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRS--YAFINFKIEEDAIASM 85
P L+VGN+ +I E++L + F FGEL+ V Q GRS Y F+ F+ A ++
Sbjct: 297 PFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREAL 356
Query: 86 KALQGFPLAGNPLRI 100
+ + GF LAG P+R+
Sbjct: 357 EKMNGFDLAGRPIRV 371
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS------YAFINFKIEEDAI 82
+PP+ LW+G+LS ++ E + + F + G+++SV R + ++ F +DA
Sbjct: 292 SPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDAT 351
Query: 83 ASMKALQGFPLAGNPLRIEFA 103
A++KA+ G +AG +R++FA
Sbjct: 352 AALKAMNGAEIAGRAIRVDFA 372
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRS--YAFINFKIEEDAIASM 85
P L+VGN+ +I E++L + F FGEL+ V Q GRS Y F+ F+ A ++
Sbjct: 294 PFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREAL 353
Query: 86 KALQGFPLAGNPLRI 100
+ + GF LAG P+R+
Sbjct: 354 EKMNGFDLAGRPIRV 368
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRS--YAFINFKIEEDAIASM 85
P L+VGN+ +I E++L + F FGEL+ V Q GRS Y F+ F+ A ++
Sbjct: 300 PFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREAL 359
Query: 86 KALQGFPLAGNPLRI 100
+ + GF LAG P+R+
Sbjct: 360 EKMNGFDLAGRPIRV 374
>gi|302499164|ref|XP_003011578.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
gi|291175130|gb|EFE30938.1| hypothetical protein ARB_02131 [Arthroderma benhamiae CBS 112371]
Length = 594
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRS--YAFINFKIEEDAIASM 85
P L+VGN+ +I E++L + F FGEL+ V Q GRS Y F+ F+ A ++
Sbjct: 299 PFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQREEAGRSKGYGFVQFRDPNQAREAL 358
Query: 86 KALQGFPLAGNPLRI 100
+ + GF LAG P+R+
Sbjct: 359 EKMNGFDLAGRPIRV 373
>gi|384485171|gb|EIE77351.1| hypothetical protein RO3G_02055 [Rhizopus delemar RA 99-880]
Length = 452
Score = 51.6 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
PSR LW+GN+S +I+ ++L F +G +ES + AFINF+ + A+A+ K L+
Sbjct: 205 PSRALWLGNISPSIKVSDLFQMFSSYGHIESARILSDKDCAFINFESVKSALAAKKDLET 264
Query: 90 --GFPLAGNPLRIEFAKA 105
G + G+ +++ F KA
Sbjct: 265 RLGSKVGGSVVKVGFGKA 282
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LWVGN+ N L F FG +E++ ++ AFINF +EDA+ + K LQ
Sbjct: 301 PTRALWVGNIPTNTSSHVLQPIFESFGPVETIRILSHKNCAFINFHRQEDAVRARKMLQN 360
Query: 91 FPL---AGNPLRIEFAK 104
+ G +R+ FA+
Sbjct: 361 KEILGPGGGTVRVGFAR 377
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 55/103 (53%), Gaps = 8/103 (7%)
Query: 7 RERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP 66
R++ G+ DR + G R + PS L++GNLS + ++ + F +G + V+
Sbjct: 313 RQKPDAGKTNDRANKYGDKR--SAPSNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPT 370
Query: 67 GRS------YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
R + +++F +E+A A++ AL G +AG +RI++A
Sbjct: 371 DRDTGSIKGFGYVDFGSQEEATAALDALNGQDIAGRNIRIDYA 413
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP------GRSYAFINFKIEEDAIASMK 86
++L+VGNLS NI+E L +F FGE+ G+ + ++ F DA +
Sbjct: 234 KNLFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQA 293
Query: 87 ALQGFPLAGNPLRIEFA 103
+ + L G PL ++F+
Sbjct: 294 EMHQYELDGRPLNVDFS 310
>gi|294909807|ref|XP_002777856.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239885818|gb|EER09651.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 360
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+VGN+S E ++ D+F R+G + PG++ F+ + E DA + + + +
Sbjct: 7 LYVGNISSRTTERDIKDEFGRYGRVIRCYIPPGKNICFVEYDDERDAEDAYRGMASARVD 66
Query: 95 GNPLRIEFAKA 105
GN L +++AKA
Sbjct: 67 GNTLNLQWAKA 77
>gi|324500726|gb|ADY40332.1| RNA-binding protein 15B [Ascaris suum]
Length = 614
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 17 DRTHSGGGGRAN-----TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYA 71
DR+ G R + PS LW+G L L +F R+G ++ + ++ G YA
Sbjct: 318 DRSIRPGTSRCKIGYGKSQPSNRLWIGGLGPWTSADYLAKEFDRYGLIDRLDYEEGADYA 377
Query: 72 FINFKIEEDAIASMKALQGFPLAGNP--LRIEFAK 104
FI F + A+ + +A++GFPL G + ++FAK
Sbjct: 378 FIRFADQNAAMDACRAMKGFPLGGRDRCIIVDFAK 412
>gi|403183501|gb|EJY58142.1| AAEL017030-PA [Aedes aegypti]
Length = 193
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGF 91
++VGNL+ +++ +L +F ++G+L SV AF P +AFI F+ +E+A ++ L G
Sbjct: 8 RVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNP-PGFAFIEFENKEEAESACDNLNGQ 66
Query: 92 PLAGNPLRIEFAKA 105
+ G+ LR+E +K
Sbjct: 67 DILGSKLRVEISKG 80
>gi|324500698|gb|ADY40321.1| RNA-binding protein 15B [Ascaris suum]
Length = 587
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + PS LW+G L L +F R+G ++ + ++ G YAFI F + A+ +
Sbjct: 304 GYGKSQPSNRLWIGGLGPWTSADYLAKEFDRYGLIDRLDYEEGADYAFIRFADQNAAMDA 363
Query: 85 MKALQGFPLAGNP--LRIEFAK 104
+A++GFPL G + ++FAK
Sbjct: 364 CRAMKGFPLGGRDRCIIVDFAK 385
>gi|312381414|gb|EFR27170.1| hypothetical protein AND_06286 [Anopheles darlingi]
Length = 1644
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S LWVG+LS +++ L+D F ++G++ S+ P R AFI +DA M++L+
Sbjct: 652 STTLWVGHLSKLVQQEELSDTFGKYGDIVSIDMIPPRGCAFIVMNRRQDAFKCMQSLKNH 711
Query: 92 PLAGNPLRIEFA 103
+ G + I +A
Sbjct: 712 KMHGRAITISWA 723
>gi|289740733|gb|ADD19114.1| repressor splicing factor 1 [Glossina morsitans morsitans]
Length = 186
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ I++ +L +F ++G+L SV AF P +AF+ F+ +DA + L G
Sbjct: 9 VYVGNLTDKIKKDDLEGEFTKYGKLNSVWIAFNP-PGFAFVEFEHRDDAEKACDVLNGTE 67
Query: 93 LAGNPLRIEFAK 104
L G+ LR+E +K
Sbjct: 68 LLGSQLRVEISK 79
>gi|341880258|gb|EGT36193.1| CBN-RSP-8 protein [Caenorhabditis brenneri]
Length = 307
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF---QP---GRSYAFINFKIEE 79
R N PPS+ L V NLS E +L D F FGE++ +P R + FI F + E
Sbjct: 77 RENPPPSKCLGVFNLSSYTTEKDLRDVFGEFGEIDKCDLVYDRPSGNSRGFGFIYFNLLE 136
Query: 80 DAIASMKALQGFPLAGNPLRIEFA 103
DA A+ + L L G+ +R++++
Sbjct: 137 DATAAREKLCNTDLDGHKIRVDYS 160
>gi|3929381|sp|Q24491.1|RX21_DROME RecName: Full=RNA-binding protein Rsf1; AltName: Full=RNA-binding
protein Rox21
gi|606749|gb|AAA73521.1| RNA binding protein [Drosophila melanogaster]
Length = 197
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ +++ +L +F ++G+L SV AF P +AF+ F+ +DA + L G
Sbjct: 9 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNP-PGFAFVEFEHRDDAEKACDILNGSE 67
Query: 93 LAGNPLRIEFAK 104
L G+ LR+E +K
Sbjct: 68 LLGSQLRVEISK 79
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-----PGRS--YAFINFKIEE 79
AN P L+VGN+ ++ E +L + F FGELE V Q PGRS Y F+ F
Sbjct: 272 ANGAPFHRLYVGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPS 331
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A ++ + GF LAG +R+
Sbjct: 332 HAKNALAEMNGFELAGRQIRV 352
>gi|14041648|emb|CAC38829.1| OTT-MAL [Homo sapiens]
Length = 1883
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 2 GRGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
G G G FR D RAN R L++GNL + E++L F RFG +
Sbjct: 350 GAGAGAAPFREV---DEISPEDDQRAN----RTLFLGNLDITVTESDLRRAFDRFGVITE 402
Query: 62 VAFQ-PGR----SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
V + P R +Y F+ F+ + + + A+ G + NP++I + KA
Sbjct: 403 VDIKRPSRGQTSTYGFLKFENLDMSHRAKLAMSGKIIIRNPIKIGYGKA 451
>gi|24583292|ref|NP_477001.2| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|442627179|ref|NP_001260318.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
gi|195339711|ref|XP_002036460.1| GM11879 [Drosophila sechellia]
gi|195578095|ref|XP_002078901.1| GD22286 [Drosophila simulans]
gi|7297638|gb|AAF52890.1| repressor splicing factor 1, isoform A [Drosophila melanogaster]
gi|17945878|gb|AAL48985.1| RE39606p [Drosophila melanogaster]
gi|194130340|gb|EDW52383.1| GM11879 [Drosophila sechellia]
gi|194190910|gb|EDX04486.1| GD22286 [Drosophila simulans]
gi|220948492|gb|ACL86789.1| Rsf1-PA [synthetic construct]
gi|220957768|gb|ACL91427.1| Rsf1-PA [synthetic construct]
gi|440213636|gb|AGB92853.1| repressor splicing factor 1, isoform B [Drosophila melanogaster]
Length = 200
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ +++ +L +F ++G+L SV AF P +AF+ F+ +DA + L G
Sbjct: 12 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNP-PGFAFVEFEHRDDAEKACDILNGSE 70
Query: 93 LAGNPLRIEFAK 104
L G+ LR+E +K
Sbjct: 71 LLGSQLRVEISK 82
>gi|403343546|gb|EJY71107.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 388
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELE--SVAFQP----GRSYAFINFKIEEDAIASMKAL 88
L+V NLS +++++L D F R+G ++ +V P R +AF+ + +DA S+ L
Sbjct: 110 LYVANLSKRVKDSDLRDLFERYGTIQKCTVVVDPITSESRGFAFVVYDNPQDAEDSLSKL 169
Query: 89 QGFPLAGNPLRIEFAK 104
G+ L G +R+E +K
Sbjct: 170 NGYDLLGKEIRVEKSK 185
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G + P L+VGN+ +I E++L + F FGELE V Q R Y F
Sbjct: 262 RNPEASSGSNHAAPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKDETGRSRGYGF 321
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG +R+
Sbjct: 322 VQFRDPNQAREALEKMNGFDLAGRAIRV 349
>gi|194859678|ref|XP_001969428.1| GG23961 [Drosophila erecta]
gi|195473557|ref|XP_002089059.1| GE26241 [Drosophila yakuba]
gi|190661295|gb|EDV58487.1| GG23961 [Drosophila erecta]
gi|194175160|gb|EDW88771.1| GE26241 [Drosophila yakuba]
Length = 200
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ +++ +L +F ++G+L SV AF P +AF+ F+ +DA + L G
Sbjct: 12 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNP-PGFAFVEFEHRDDAEKACDILNGSE 70
Query: 93 LAGNPLRIEFAK 104
L G+ LR+E +K
Sbjct: 71 LLGSQLRVEISK 82
>gi|14041646|emb|CAC38828.1| OTT-MAL [Homo sapiens]
Length = 1905
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + A L +F RFG + ++ ++ G S+A+I ++ + A
Sbjct: 447 GYGKAT--PTTRLWVGGLGPWVPLAALAREFDRFGTIRTIDYRKGDSWAYIQYESLDAAH 504
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 505 AAWTHMRGFPLGGPDRRLRVDFA 527
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 2 GRGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
G G G FR D RAN R L++GNL + E++L F RFG +
Sbjct: 350 GAGAGAAPFREV---DEISPEDDQRAN----RTLFLGNLDITVTESDLRRAFDRFGVITE 402
Query: 62 VAFQ-PGR----SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
V + P R +Y F+ F+ + + + A+ G + NP++I + KA
Sbjct: 403 VDIKRPSRGQTSTYGFLKFENLDMSHRAKLAMSGKIIIRNPIKIGYGKA 451
>gi|125823894|ref|XP_001335820.1| PREDICTED: putative RNA-binding protein 15 [Danio rerio]
Length = 853
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ LWVG L + L +F RFG + ++ ++ G ++A+I ++ + A
Sbjct: 377 GYGKAT--PTTRLWVGGLGPWVPLTALAREFDRFGTIRTIDYRKGDTWAYIQYESLDAAQ 434
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A+ ++GFPL G LR++FA
Sbjct: 435 AACTHMRGFPLGGPDRRLRVDFA 457
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 14 RFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR---- 68
R ED RAN R L++GNL + E +L F RFG + V + P R
Sbjct: 289 REEDFISPEDDQRAN----RTLFLGNLDITVTENDLRRAFERFGTITEVDIKRPTRGQSS 344
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+Y F+ F+ + A + ++ G + NP++I + KA
Sbjct: 345 TYGFLKFENLDMAHRAKISMSGKVVGRNPIKIGYGKA 381
>gi|225714040|gb|ACO12866.1| Splicing factor, arginine/serine-rich 10 [Lepeophtheirus salmonis]
Length = 323
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF-----QPGRSYAFINFKIEED 80
R N P S L V LS++ +E +L +F RFG LES+ + R + FI+FK ED
Sbjct: 208 RDNPPASNVLGVFGLSYSTDEHDLNREFSRFGALESIRIVRDPERRSRGFGFIDFKYVED 267
Query: 81 AIASMKALQGFPLAGNPLRIEFA 103
A + +AL L G +R++F+
Sbjct: 268 AKQARRALCDTYLDGKKIRVDFS 290
>gi|255732796|ref|XP_002551321.1| hypothetical protein CTRG_05619 [Candida tropicalis MYA-3404]
gi|240131062|gb|EER30623.1| hypothetical protein CTRG_05619 [Candida tropicalis MYA-3404]
Length = 409
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 13 GRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQ---P 66
GR E T G + PPSR L+VGNLS + E NL + F G++ + FQ
Sbjct: 196 GRPEKSTTEGSSSASKNPPSRILFVGNLSFDTTEDNLEEHFRHCGDITRIRMATFQDTGK 255
Query: 67 GRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEF 102
+ +AFI+FK EE A ++ + LR+E+
Sbjct: 256 CKGFAFIDFKNEEGATNALNSKLTKIFINRKLRMEY 291
>gi|357601983|gb|EHJ63226.1| RNA recognition motif protein split ends [Danaus plexippus]
Length = 518
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 13 GRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAF 72
G+F+ + G G+A P+ +WVG L A L +F RFG ++ + + G +A+
Sbjct: 135 GKFQCKI---GYGKAT--PTTRVWVGGLGPWTSVAQLEREFDRFGAIKKIEYAKGEPHAY 189
Query: 73 INFKIEEDAIASMKALQGFPLAGNP--LRIEFA 103
I + + A A++K ++GFPL G LRI+FA
Sbjct: 190 ILYDSIDAAQAAVKEMRGFPLGGPDRRLRIDFA 222
>gi|363750388|ref|XP_003645411.1| hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889045|gb|AET38594.1| Hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
Length = 586
Score = 51.2 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + +++G L++ I E+ L F+ FG + SV PG+ F+ F+ DA A+++ +Q
Sbjct: 395 PSNTTVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGKGCGFVKFEHRLDAEAAIQGMQ 454
Query: 90 GFPLAGNPLRIEFAK 104
GF + + +R+ + +
Sbjct: 455 GFIVGNSAIRLSWGR 469
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G + P L+VGN+ +I E++L + F FGELE V Q R Y F
Sbjct: 265 RNPEASSGNNHAAPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKDETGRSRGYGF 324
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG +R+
Sbjct: 325 VQFRDPNQAREALEKMNGFDLAGRAIRV 352
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 22 GGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF---QPGRS---YAFINF 75
GGG AN L+VG+L N+ E L D F + ++ S+ Q RS YA++NF
Sbjct: 28 GGGPFANA----SLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNF 83
Query: 76 KIEEDAIASMKALQGFPLAGNPLRIEFAK 104
+DA +M+ L PL G P+RI F++
Sbjct: 84 ANAQDASNAMELLNFTPLNGKPIRIMFSQ 112
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
Query: 22 GGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF---QPGRS---YAFINF 75
GGG AN L+VG+L N+ E L D F + ++ S+ Q RS YA++NF
Sbjct: 28 GGGPFANA----SLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNF 83
Query: 76 KIEEDAIASMKALQGFPLAGNPLRIEFAK 104
+DA +M+ L PL G P+RI F++
Sbjct: 84 ANAQDASNAMELLNFTPLNGKPIRIMFSQ 112
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G + P L+VGN+ +I E++L + F FGELE V Q R Y F
Sbjct: 264 RNPEASSGNNHAAPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQKDETGRSRGYGF 323
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG +R+
Sbjct: 324 VQFRDPNQAREALEKMNGFDLAGRAIRV 351
>gi|158298753|ref|XP_318916.3| AGAP009810-PA [Anopheles gambiae str. PEST]
gi|157014037|gb|EAA14200.3| AGAP009810-PA [Anopheles gambiae str. PEST]
Length = 306
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAI 82
T R ++VG LS + E +TD F+ FG+L + Q R +AFI F+ EDA
Sbjct: 2 TSDKRTVYVGGLSEEVTEKLITDAFIPFGDLVDIQMPIDYESQKHRGFAFIEFENAEDAA 61
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
A++ + L G +R+ AK
Sbjct: 62 AAVDNMNDSELCGRTIRVNTAK 83
>gi|45184976|ref|NP_982694.1| AAR151Wp [Ashbya gossypii ATCC 10895]
gi|44980597|gb|AAS50518.1| AAR151Wp [Ashbya gossypii ATCC 10895]
Length = 481
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
+++G LS+ I E L F+ FG + SV PGR F+ F+ DA A+++ +QGF +
Sbjct: 328 VFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGMQGFIVG 387
Query: 95 GNPLRIEFAKA 105
GN +R+ + +
Sbjct: 388 GNAIRLSWGRT 398
>gi|374105894|gb|AEY94805.1| FAAR151Wp [Ashbya gossypii FDAG1]
Length = 475
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
+++G LS+ I E L F+ FG + SV PGR F+ F+ DA A+++ +QGF +
Sbjct: 328 VFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGMQGFIVG 387
Query: 95 GNPLRIEFAKA 105
GN +R+ + +
Sbjct: 388 GNAIRLSWGRT 398
>gi|443919138|gb|ELU39394.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 364
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 6/104 (5%)
Query: 7 RERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGEL--ESVAF 64
R R G EDR S G N P ++ V LS ++ L D F +FG++ SV +
Sbjct: 163 RSRSPGRSGEDRGRSNANGPVNLNPGNNIHVSGLSSRVDNRMLEDAFGKFGKVAKASVVY 222
Query: 65 QP----GRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
P R +AF+ E+A A++ L LAG P+ +E A+
Sbjct: 223 DPHSRESRGFAFVTMDTVEEAEAAIAGLHNSELAGKPITVEKAR 266
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 18 RTHSGGGGRAN------TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-- 69
+ + GG RAN +PPS L++GN+S ++ + F +G + V+ R
Sbjct: 298 KPDANGGARANKYGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTG 357
Query: 70 ----YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
+ +++F +++A A+++AL G + G +RI++A
Sbjct: 358 ALKGFGYVDFSSQQEATAALEALNGQDIGGRAIRIDYA 395
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMK 86
++L+VGN+S NI+E L +F FGE+ + GR+ + ++ F DA + K
Sbjct: 217 KNLFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKAQK 276
Query: 87 ALQGFPLAGNPLRIEFA 103
+ + L G L ++F+
Sbjct: 277 EMHEYELDGRQLNVDFS 293
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 12/98 (12%)
Query: 18 RTHSGGGGRAN------TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-- 69
+ + GG RAN +PPS L++GN+S ++ + F +G + V+ R
Sbjct: 302 KPDANGGARANKYGDKRSPPSNTLFLGNVSFECSNESIQEVFAEYGSITRVSLPTDRDTG 361
Query: 70 ----YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
+ +++F +++A A+++AL G + G +RI++A
Sbjct: 362 ALKGFGYVDFSSQQEATAALEALNGQDIGGRAIRIDYA 399
>gi|307136258|gb|ADN34086.1| RNA-binding protein [Cucumis melo subsp. melo]
Length = 916
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P R+LWVG +S + L ++F +FG+++ F R+ AF+ + EDA +++ + G
Sbjct: 3 PCRNLWVGGISPAVSREQLEEEFSKFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMMNG 62
Query: 91 FPLAGNPLRIEFAKA 105
+ G LR++F ++
Sbjct: 63 KRIGGEQLRVDFLRS 77
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 26 RANTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
R + PPS+ LW+G S I+E L + + FGE+E + R +AF+ F+ ++A +
Sbjct: 121 RRDGPPSKVLWIGYPPSVQIDEQMLHNAMILFGEIERITSFHTRHFAFVEFRSVDEARRA 180
Query: 85 MKALQG 90
+ LQG
Sbjct: 181 KEGLQG 186
>gi|3789907|gb|AAC67539.1| developmental protein DG1074 [Dictyostelium discoideum]
Length = 259
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S ++VG+L+ +E L + F FGE+ S+ P R +AF+N+K E + ++ + G
Sbjct: 85 SNAIFVGDLTPIAQEQTLNNIFKEFGEITSIRLFPSRGFAFVNYKDSESCVRAIAGMNGG 144
Query: 92 PLAGNPLRI 100
+ GNP+++
Sbjct: 145 LVDGNPVKV 153
>gi|351713456|gb|EHB16375.1| Putative RNA-binding protein 15B [Heterocephalus glaber]
Length = 570
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L N A L +F RFG + ++ G +A+I F+ + A
Sbjct: 86 GYGKAN--PTARLWVGGLGPNPSLAALAREFDRFGIIRTIDHIKGDDFAYIQFETLDAAE 143
Query: 83 ASMKALQGFPLAG--NPLRIEFAKA 105
+ ++GFP+ G LR+ FA+A
Sbjct: 144 VACAEMRGFPVGGPHRRLRVGFARA 168
>gi|390601482|gb|EIN10876.1| hypothetical protein PUNSTDRAFT_51453 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 206
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
SG + + P+R LW+G++ A + F +G +ES ++ FINF+ +D
Sbjct: 70 SGMDAQLQSTPTRTLWIGSIPSTTTPAAILSVFSPYGPIESARVLTHKNCGFINFECLDD 129
Query: 81 AIASMKALQGFPLAGN---PLRIEFAK 104
A+ + KAL G + G+ +RI FAK
Sbjct: 130 AVRARKALNGRDILGSDVGAIRIGFAK 156
>gi|50291529|ref|XP_448197.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527508|emb|CAG61148.1| unnamed protein product [Candida glabrata]
Length = 380
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS + + L F GE+ + FQ + +AF++FK EE
Sbjct: 217 SKNPPSRILFVGNLSFDTTDELLRKHFQHCGEIVKIRMATFQDSGKCKGFAFVDFKNEEG 276
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
A ++K +AG PLR+EF +
Sbjct: 277 ATNALKDKSCRKIAGRPLRMEFGE 300
>gi|357462061|ref|XP_003601312.1| Flowering time control protein FPA [Medicago truncatula]
gi|355490360|gb|AES71563.1| Flowering time control protein FPA [Medicago truncatula]
Length = 881
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 28 NTPPSRHLWVGNLSH-NIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
N PS LWVG + ++E+ L F FGE+E ++ PGRSYAF+ + A ++
Sbjct: 120 NPEPSEVLWVGFPAQLKVDESILGRAFAPFGEIEKISTFPGRSYAFVRYSSVASACIALD 179
Query: 87 ALQGFPLAGNP-LRIEFA 103
ALQG L GNP + I FA
Sbjct: 180 ALQG-KLFGNPRVHICFA 196
>gi|170035265|ref|XP_001845491.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877141|gb|EDS40524.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 197
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGF 91
++VGNL+ +++ +L +F ++G+L SV AF P +AFI F+ +E+A ++ L G
Sbjct: 8 RVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPP-GFAFIEFENKEEAESACDNLNGQ 66
Query: 92 PLAGNPLRIEFAK 104
+ G+ LR+E +K
Sbjct: 67 DILGSKLRVEISK 79
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
ER R T S R N P R L+VG+L NI E L F FG+++ +
Sbjct: 275 ERNRAAAQNASTSSSTLQRGNVGPMR-LYVGSLHFNITEDMLKGIFEPFGKIDKIELIKD 333
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ RS Y FI F EDA +++ L GF LAG P+++
Sbjct: 334 METNRSKGYGFITFHDSEDAKKALEQLNGFELAGRPMKV 372
>gi|195450476|ref|XP_002072511.1| GK12439 [Drosophila willistoni]
gi|194168596|gb|EDW83497.1| GK12439 [Drosophila willistoni]
Length = 192
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ +++ +L +F ++G+L SV AF P +AF+ F+ +DA + L G
Sbjct: 9 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPP-GFAFVEFEHRDDAEKACDILNGSE 67
Query: 93 LAGNPLRIEFAK 104
L G+ LR+E +K
Sbjct: 68 LLGSQLRVEISK 79
>gi|390596324|gb|EIN05726.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 614
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAI 82
+ PPS L+VGNLS EE ++ D F FG +ESV G+ +A + FK EDA+
Sbjct: 308 HMPPSPTLFVGNLSFQAEEEDVQDLFEDFGVVESVTLGRGKDGRMAGFAHVEFKSIEDAL 367
Query: 83 ASMKALQGFPLA 94
+M+ Q PLA
Sbjct: 368 RAMERHQESPLA 379
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDA 81
++ PS L++G +S++ +E +L + F ++GE+ + GRS + FI + E+A
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
Query: 82 IASMKALQGFPLAGNPLRIEFA 103
++++AL G L G P+R+ +A
Sbjct: 97 SSAIQALDGQDLHGRPIRVNYA 118
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L+ N+ + +L F FG++E V G+S YAF+ FK DA +M+ +
Sbjct: 435 LYVGSLNFNLTDDDLRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKM 494
Query: 89 QGFPLAGNPLRIEF 102
GF LAG LR+E
Sbjct: 495 NGFQLAGRALRVEI 508
>gi|308466765|ref|XP_003095634.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
gi|308244633|gb|EFO88585.1| hypothetical protein CRE_13671 [Caenorhabditis remanei]
Length = 328
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQ 89
++VGNL N+ E + D F ++GE+ ++ + RS +AFI F DA +++A
Sbjct: 6 VYVGNLPSNVREKEIEDIFHKYGEIRNIDIK-SRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 90 GFPLAGNPLRIEF 102
G+ G LR+EF
Sbjct: 65 GYEFDGKRLRVEF 77
>gi|195387425|ref|XP_002052396.1| GJ17527 [Drosophila virilis]
gi|194148853|gb|EDW64551.1| GJ17527 [Drosophila virilis]
Length = 198
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ +++ +L +F ++G+L SV AF P +AF+ F+ +DA + L G
Sbjct: 9 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPP-GFAFVEFEHRDDAEKACDILNGSE 67
Query: 93 LAGNPLRIEFAK 104
L G+ LR+E +K
Sbjct: 68 LLGSQLRVEISK 79
>gi|405953685|gb|EKC21299.1| Regulator of differentiation 1 [Crassostrea gigas]
Length = 764
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-GRSYAFINFKIEEDAIASMKAL 88
PPS L + N+ NIEE L+D F + G++++ F P R A I ++A+ ++ A+
Sbjct: 685 PPSAVLHLSNIPPNIEEDFLSDAFAQHGQVKAFKFFPKDRKMALIQMASVDEAVTALIAM 744
Query: 89 QGFPLAG-NPLRIEFAKA 105
+PL+ N LR+ F+K+
Sbjct: 745 HNYPLSDTNHLRVSFSKS 762
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + ++VG LS ++ E L F +FG ++ + PG++ F+ + EDA ++ ++Q
Sbjct: 325 PNNTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQ 384
Query: 90 GFPLAGNPLRIEFAKA 105
GF + GN +R+ + +
Sbjct: 385 GFIIGGNRVRLSWGRV 400
>gi|330795007|ref|XP_003285567.1| hypothetical protein DICPUDRAFT_149432 [Dictyostelium purpureum]
gi|325084480|gb|EGC37907.1| hypothetical protein DICPUDRAFT_149432 [Dictyostelium purpureum]
Length = 268
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%)
Query: 13 GRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAF 72
G ++ R ++ G A ++VG+L+ +I+E +L + F FGE+ S+ P R +AF
Sbjct: 18 GGYQPRDYNNNNGMAQQNNQNAIFVGDLTQSIQEPHLQNSFKEFGEIVSIRIFPQRGFAF 77
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+NFK E ++ + G + G +++ + A
Sbjct: 78 VNFKDSESVEKAINGMNGGLIEGIAVKVGHSNA 110
>gi|296420628|ref|XP_002839871.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636077|emb|CAZ84062.1| unnamed protein product [Tuber melanosporum]
Length = 1073
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 10/104 (9%)
Query: 10 FRGGRFEDRTHSGGGGRANTP------PSRHLWVGNLSHNIEEANLTDQFLRFGELESVA 63
+ G R SG GG A+ P+R LW+GN+ + +L F FG +ES
Sbjct: 314 LKLGNMHPRPSSGEGGLASIEESSLEGPTRSLWLGNIPASTTTTSLVHIFQGFGNVESAR 373
Query: 64 FQPGRSYAFINFKIEEDAIASMKALQG---FPLAGNPLRIEFAK 104
++ F+NF + A+ + +L G FP AG P+RI FAK
Sbjct: 374 VLTHKNCGFVNFNSIDSAVQARSSLNGKEIFPGAG-PVRIGFAK 416
>gi|146421272|ref|XP_001486586.1| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 44/76 (57%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + ++VG LS ++ E L F +FG ++ + PG++ F+ + EDA ++ ++Q
Sbjct: 325 PNNTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQ 384
Query: 90 GFPLAGNPLRIEFAKA 105
GF + GN +R+ + +
Sbjct: 385 GFIIGGNRVRLSWGRV 400
>gi|428182175|gb|EKX51036.1| hypothetical protein GUITHDRAFT_134574 [Guillardia theta CCMP2712]
Length = 458
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 47/76 (61%), Gaps = 7/76 (9%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG------RSYAFINFKIEEDAIA 83
PP+R +++G++ +++E+ + F FG ++ ++ P + Y FI ++ +DA+
Sbjct: 229 PPAR-IYIGSVLFDVKESEVKQIFQVFGSIKQISMIPNPENGKHKGYGFIEYEKHDDAVQ 287
Query: 84 SMKALQGFPLAGNPLR 99
+++A+ GF LAG PL+
Sbjct: 288 AIQAMNGFQLAGRPLK 303
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 49/78 (62%), Gaps = 7/78 (8%)
Query: 30 PPSRH-LWVGNLSHNIEEANLTDQFLRFGELESV--AFQP----GRSYAFINFKIEEDAI 82
PP R+ L+VG+L +++EA++ F FG ++++ +++P + YAFI + + A
Sbjct: 94 PPQRNRLYVGSLHFDLKEADVRAIFQPFGPIKTIEMSYEPTTGKSKGYAFIEYMNDAQAD 153
Query: 83 ASMKALQGFPLAGNPLRI 100
A KA+ GF +AG P+++
Sbjct: 154 ACEKAMDGFMIAGRPIKV 171
>gi|111226955|ref|XP_645138.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90971285|gb|EAL71206.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 469
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S ++VG+L+ +E L + F FGE+ S+ P R +AF+N+K E + ++ + G
Sbjct: 246 SNAIFVGDLTPIAQEQTLNNIFKEFGEITSIRLFPSRGFAFVNYKDSESCVRAIAGMNGG 305
Query: 92 PLAGNPLRI 100
+ GNP+++
Sbjct: 306 LVDGNPVKV 314
>gi|449436495|ref|XP_004136028.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
gi|449498497|ref|XP_004160553.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Cucumis sativus]
Length = 309
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D F ++G + + + P R YAF+ F+ EDA +++
Sbjct: 6 SRTVYVGNLPGDIREKEVEDLFYKYGRIAHIDLKVPPRPPGYAFVEFEDAEDAQDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ LR+E A
Sbjct: 66 DGYDFDGHRLRVELA 80
>gi|281208502|gb|EFA82678.1| hypothetical protein PPL_04372 [Polysphondylium pallidum PN500]
Length = 918
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G ++ PSR LWVGN+ ++ E L +F +GELESV R AF+NFK DAI +
Sbjct: 580 GNSDEQPSRILWVGNIGMDVSEEELKSEFGVYGELESVRILHDRFCAFVNFK---DAINA 636
Query: 85 MKA 87
A
Sbjct: 637 ANA 639
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 43/73 (58%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
SR +++GN+S N+ E + + ++GE+ESV ++ AF+NF +A +++AL G
Sbjct: 686 SRAIYIGNVSDNLPEKEIRKECEKYGEIESVRILRKKACAFVNFMNIPNATVALQALNGK 745
Query: 92 PLAGNPLRIEFAK 104
L +R+ + K
Sbjct: 746 KLGDTIVRVNYGK 758
>gi|289739371|gb|ADD18433.1| alternative splicing factor SRP20/9G8 [Glossina morsitans
morsitans]
Length = 168
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ I++ +L +F ++G+L SV AF P +AF+ F+ +DA + L G
Sbjct: 9 VYVGNLTDKIKKDDLEGEFTKYGKLNSVWIAFNP-PGFAFVEFEHRDDAEKACDVLNGTE 67
Query: 93 LAGNPLRIEFAK 104
L G+ LR+E +K
Sbjct: 68 LLGSQLRVEISK 79
>gi|74215844|dbj|BAE23446.1| unnamed protein product [Mus musculus]
Length = 631
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 10/59 (16%)
Query: 27 ANTPPS-----RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-----SYAFINF 75
A TPPS RHLWVGNL N+ E + + F R+G +ESV P R AF++F
Sbjct: 74 AGTPPSMVRETRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDF 132
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR---SYAFINFKIEEDAIASMKAL 88
+R L++GNL +L + F RFGE+ + + YAF+ + ++K +
Sbjct: 518 TRTLFIGNLEKTTTYHDLRNIFQRFGEIVDIDIKKVNGVPQYAFLQYCDIASVCKAIKKM 577
Query: 89 QGFPLAGNPLRIEFAKA 105
G L N L++ F K+
Sbjct: 578 DGEYLGNNRLKLGFGKS 594
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESV------AFQPGRSYAFINFKIEEDAIASMK 86
+ L+VG+L +NI E L F FG +E V A R YAF+ F+ + A +M
Sbjct: 250 KKLYVGSLHYNITEDMLQGIFSPFGNVERVSIMRDTATNVSRGYAFVEFRDSDSAERAMA 309
Query: 87 ALQGFPLAGNPLRIEFA 103
L GF LAG P+++ +
Sbjct: 310 NLNGFELAGRPMKVNYG 326
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G + P L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 262 RNPDASSGNNHAAPFHRLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDETGRSRGYGF 321
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG +R+
Sbjct: 322 VQFRDPNQAREALEKMNGFDLAGRAIRV 349
>gi|50304975|ref|XP_452445.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641578|emb|CAH01296.1| KLLA0C05522p [Kluyveromyces lactis]
Length = 540
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S ++VG L+ NI E L + F FG + V PG+ F+ + +A A++ LQGF
Sbjct: 444 STTVFVGGLNPNINELQLFELFKPFGTITDVKIPPGKQCGFVKYNERLEAEAAINGLQGF 503
Query: 92 PLAGNPLRIEFAK 104
+ G+P+R+ + +
Sbjct: 504 IIMGSPIRLSWGR 516
>gi|367002926|ref|XP_003686197.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
gi|357524497|emb|CCE63763.1| hypothetical protein TPHA_0F02820 [Tetrapisispora phaffii CBS 4417]
Length = 608
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
+++G LS + E L F FG + SV G++ F+ FK + +A A++K +QGF +
Sbjct: 344 VFIGGLSTSTNEYELQVLFEPFGNILSVKIPIGKNCGFVKFKRKIEANAAIKGMQGFIIN 403
Query: 95 GNPLRIEFAKA 105
GNP+R+ + K+
Sbjct: 404 GNPIRLSWGKS 414
>gi|345569228|gb|EGX52096.1| hypothetical protein AOL_s00043g486 [Arthrobotrys oligospora ATCC
24927]
Length = 1145
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+GN+ + ++L F +G +ES ++ F+NF+ E A+ S L G
Sbjct: 418 PTRALWLGNIPASTTTSSLVAIFQNYGPIESARVLTHKNCGFVNFERVESAVQSRSVLNG 477
Query: 91 ---FPLAGNPLRIEFAKA 105
FP AG P+RI FAK
Sbjct: 478 KEIFPGAG-PVRIGFAKV 494
>gi|325192592|emb|CCA27020.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 347
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VGNL+ + +E +L F +FG +ES A + R Y F+NF+ + A +++ + L
Sbjct: 4 IYVGNLTSDFDERDLEAGFEKFGRIESCAVK--RGYGFVNFRDDHSAAEALREMDDTELK 61
Query: 95 GNPLRIEFAKA 105
G +R+ +A +
Sbjct: 62 GRRIRVAYANS 72
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEE 79
R N P SR+L+V N+ N+ L + F R+G++++V P AF++F E
Sbjct: 86 ARENGPVSRNLFVANIPPNVRLRELEEFFERYGKVQNVKILPQVKGNVTMSAFVDFSTEA 145
Query: 80 DAIASMKALQGFPLAGNPLRIEF 102
+A ++ A L G LR ++
Sbjct: 146 EAESAHTA--ELVLDGKCLRTDY 166
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G + P L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 260 RNPEASSGHNHAAPFHRLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDETGRSRGYGF 319
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG +R+
Sbjct: 320 VQFRDPNQAREALEKMNGFDLAGRAIRV 347
>gi|158299891|ref|XP_319902.4| AGAP009142-PA [Anopheles gambiae str. PEST]
gi|157013736|gb|EAA43387.4| AGAP009142-PA [Anopheles gambiae str. PEST]
Length = 202
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGF 91
++VGNL+ +++ +L +F ++G+L SV AF P +AFI F+ +E+A + L G
Sbjct: 11 RVYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPP-GFAFIEFENKEEAETACDNLNGQ 69
Query: 92 PLAGNPLRIEFAK 104
+ G+ LR+E +K
Sbjct: 70 DILGSKLRVEISK 82
>gi|374628484|ref|ZP_09700869.1| RNP-1 like RNA-binding protein [Methanoplanus limicola DSM 2279]
gi|373906597|gb|EHQ34701.1| RNP-1 like RNA-binding protein [Methanoplanus limicola DSM 2279]
Length = 83
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S ++VGNL+H + E + D F FG++ SV +P +AF+ + E+A ++ G
Sbjct: 3 SHKVYVGNLAHYVTEEEIEDLFAEFGDIMSVKIKPQEGFAFVEYSTIEEAENAIHGTNGK 62
Query: 92 PLAGNPLRIEFA 103
+G L++E A
Sbjct: 63 EFSGRTLKVEDA 74
>gi|323303373|gb|EGA57169.1| Nop13p [Saccharomyces cerevisiae FostersB]
gi|323352517|gb|EGA85016.1| Nop13p [Saccharomyces cerevisiae VL3]
Length = 235
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS ++ + L F G++ + F+ + +AFI+FK EE
Sbjct: 65 SKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEG 124
Query: 81 AIASMKALQGFPLAGNPLRIEF 102
+ ++K +AG PLR+E+
Sbjct: 125 STNALKDKSCRKIAGRPLRMEY 146
>gi|194761708|ref|XP_001963070.1| GF14123 [Drosophila ananassae]
gi|190616767|gb|EDV32291.1| GF14123 [Drosophila ananassae]
Length = 192
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ +++ +L +F ++G+L SV AF P +AF+ F+ +DA + L G
Sbjct: 9 VYVGNLTDKVKKDDLEGEFTKYGKLNSVWIAFNPP-GFAFVEFEHRDDAEKACDILNGSE 67
Query: 93 LAGNPLRIEFAK 104
L G+ LR+E +K
Sbjct: 68 LLGSQLRVEISK 79
>gi|11527011|gb|AAG36874.1|AF242767_1 SF2 [Caenorhabditis elegans]
Length = 258
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR--SYAFINFKIEEDAIASMKALQ 89
+ ++VGNL ++ E + D F ++G ++ V + GR ++AF+ F+ DA +++A
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 90 GFPLAGNPLRIEFAK 104
G+ G +R+EF +
Sbjct: 68 GYEFDGRRIRVEFTR 82
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 44/76 (57%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + ++VG LS+NI EA L F +G++ V PG+ F+ F DA +++ LQ
Sbjct: 247 PTNTTVFVGGLSNNITEATLLSIFEPYGQIVHVKVPPGKGCGFVKFTQRTDAERAIEQLQ 306
Query: 90 GFPLAGNPLRIEFAKA 105
G+ + G+ +R+ + ++
Sbjct: 307 GYVIDGSRVRLSWGRS 322
>gi|268572859|ref|XP_002641430.1| C. briggsae CBR-RSP-8 protein [Caenorhabditis briggsae]
Length = 298
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF---QP---GRSYAFINFK 76
G R N PPS+ L V NLS E +L D F FGE+E +P R + FI F+
Sbjct: 62 GQDRENPPPSKCLGVFNLSSYTTEKDLRDVFGEFGEIEKCDLVYDRPSGNSRGFGFIYFE 121
Query: 77 IEEDAIASMKALQGFPLAGNPLRIEFA 103
+DA A+ + L L G+ +R++++
Sbjct: 122 QIDDAAAAREKLCNTDLDGHKIRVDYS 148
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASM 85
S +L+VGNLS N++E L +F FGEL V GRS + ++ F EDA +
Sbjct: 264 SANLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDAAKAF 323
Query: 86 KALQGFPLAGNPLRIEFAKA 105
+A +G L G PL +++A A
Sbjct: 324 EAKKGAELDGRPLNLDYANA 343
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 4 GGGRER--FRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
GG ++R R F D+T +P S L++GN+S +E + + F +G +
Sbjct: 348 GGAKDRSQARAKSFGDQT---------SPESDTLFIGNISFGADENAIQETFSSYGTISG 398
Query: 62 VAF----QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
+ + GR + +I F ++A +++ LQG LAG +R++F+
Sbjct: 399 IRLPTDPESGRPKGFGYIQFSSVDEARSALNELQGSELAGRAMRLDFS 446
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDA 81
++ PS L++G +S++ +E +L + F ++GE+ + GRS + FI + E+A
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
Query: 82 IASMKALQGFPLAGNPLRIEFAK 104
++++AL G L G P+R+ +A
Sbjct: 97 SSAIQALDGQDLHGRPIRVNYAN 119
>gi|70996384|ref|XP_752947.1| RNA splicing factor (Pad-1) [Aspergillus fumigatus Af293]
gi|66850582|gb|EAL90909.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus Af293]
gi|159131701|gb|EDP56814.1| RNA splicing factor (Pad-1), putative [Aspergillus fumigatus A1163]
Length = 566
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP---GRS--YAF 72
R G + P L+VGN+ +I E +L + F FGELE V Q GRS Y F
Sbjct: 260 RNPEASSGHNHAAPFHRLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDEAGRSKGYGF 319
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG +R+
Sbjct: 320 VQFRDPNQAREALEKMNGFDLAGRAIRV 347
>gi|119494703|ref|XP_001264168.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
gi|119412330|gb|EAW22271.1| RNA splicing factor (Pad-1), putative [Neosartorya fischeri NRRL
181]
Length = 566
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP---GRS--YAF 72
R G + P L+VGN+ +I E +L + F FGELE V Q GRS Y F
Sbjct: 260 RNPEASSGHNHAAPFHRLYVGNIHFSITENDLQNVFEPFGELEFVQLQKDEAGRSKGYGF 319
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + GF LAG +R+
Sbjct: 320 VQFRDPNQAREALEKMNGFDLAGRAIRV 347
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VGNL N+ E L FL+FGE+ SV PG++ F+ F A +++ +QG L
Sbjct: 236 IYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILG 295
Query: 95 GNPLRIEFAK 104
+R+ + +
Sbjct: 296 QQVIRVSWGR 305
>gi|398409740|ref|XP_003856335.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
gi|339476220|gb|EGP91311.1| hypothetical protein MYCGRDRAFT_102491 [Zymoseptoria tritici
IPO323]
Length = 505
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 4 GGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVA 63
G + R RF D T++ P+ L+VGN+S + +E +T+ F G +++V
Sbjct: 328 AGNKSNDRAARFGDTTNA---------PAATLFVGNISFDADENAITEYFQEHGTIKAVR 378
Query: 64 FQPGRS------YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
R + ++ E+A A+ ALQG +AG P+R+++A
Sbjct: 379 LPTDRETGAPKGFGYVEMSSIEEAQAAFTALQGADIAGRPIRLDYA 424
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIAS 84
P+ +L+VGN+S N++E LT +F FGEL V GRS + ++ F ++A +
Sbjct: 240 PTGNLFVGNISWNVDEEWLTREFEEFGELAGVRIITDRDSGRSKGFGYVEFSDPQNAKKA 299
Query: 85 MKALQGFPLAGNPLRIEFA 103
++A G L G LR++F+
Sbjct: 300 LEAKNGAELDGRELRLDFS 318
>gi|443921112|gb|ELU40879.1| splicing factor, CC1-like family protein [Rhizoctonia solani AG-1
IA]
Length = 399
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 17 DRTHSGGGGRANTPP--------SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ--- 65
+R G + PP S L+VG+L N+ E+++ F FGEL+ V
Sbjct: 146 ERNKIGPSSSLHLPPGVSHPHAGSMQLYVGSLHFNLTESDIRQVFEPFGELDFVDLHRDP 205
Query: 66 ---PGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ Y FI +K EDA +++ ++GF LAG LR+
Sbjct: 206 ATGKSKGYCFIQYKRPEDARMALEQMEGFELAGRQLRV 243
>gi|355567930|gb|EHH24271.1| Nucleolar protein Nop132 [Macaca mulatta]
Length = 1172
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS NI EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|393910934|gb|EFO26130.2| hypothetical protein LOAG_02347 [Loa loa]
Length = 555
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + PS LW+G L L +F R+G ++ + ++ G +A+I F + A+ +
Sbjct: 273 GYGKSQPSNRLWIGGLGPWTSAEYLAKEFDRYGLIDRLDYEEGADFAYIRFTDQNAAMDA 332
Query: 85 MKALQGFPLAGNP--LRIEFAK 104
+A++GFPL G + ++FAK
Sbjct: 333 CRAMKGFPLGGRDRCIIVDFAK 354
>gi|58266510|ref|XP_570411.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57226644|gb|AAW43104.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1221
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 7 RERFRGGRFEDRTHSGGGGR-----ANTP--PSRHLWVGNLSHNIEEANLTDQFLRFGEL 59
R+ R GR +H+ G ++TP P+R LW+GNL N L F +G +
Sbjct: 351 RDSSRAGRLSISSHTSRTGTPEDKGSSTPQVPTRSLWIGNLDVNATSNALFQVFAPYGAI 410
Query: 60 ESVAFQPGRSYAFINFKIEEDAIAS----MKALQGFPLAGN---PLRIEFAK 104
ESV P ++ AF+NF + DAI + + L G A + P+RI F K
Sbjct: 411 ESVRMLPEKTCAFVNFMDKVDAIRARDDVLNRLGGHVSALSETAPVRIGFGK 462
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ + L F FG +ES + F+NF+ + A+++ AL G
Sbjct: 536 PTRALWIGSIPSTTSASTLLQIFTPFGPVESSRVLQNKCCGFVNFERLDSAVSARNALNG 595
Query: 91 FPLAGN---PLRIEFAK 104
+ G+ P+RI FA+
Sbjct: 596 RDILGSDVGPIRIGFAR 612
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ------PGRSYAFINFKIEEDAIASMKAL 88
L+VG+L+ N+ + ++ F FG++E V + YAF+ FK DA +M+ +
Sbjct: 452 LYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKM 511
Query: 89 QGFPLAGNPLRIEF 102
GF LAG LR+E
Sbjct: 512 NGFQLAGRALRVEI 525
>gi|241953799|ref|XP_002419621.1| RNA-binding protein, putative; nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223642961|emb|CAX43217.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 393
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 17 DRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSY 70
D H+GG +N PPSR L+VGNLS + E L + F GE+ + FQ + +
Sbjct: 195 DTAHNGGINSSN-PPSRILFVGNLSFDTTEDLLEEHFKHCGEIVKIRMATFQDTGKCKGF 253
Query: 71 AFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
AFI+FK EE A ++K+ L LR+E+ +
Sbjct: 254 AFIDFKDEEGATTALKSKLTKMLINRKLRMEYGE 287
>gi|68472133|ref|XP_719862.1| hypothetical protein CaO19.6766 [Candida albicans SC5314]
gi|68472368|ref|XP_719745.1| hypothetical protein CaO19.14058 [Candida albicans SC5314]
gi|46441577|gb|EAL00873.1| hypothetical protein CaO19.14058 [Candida albicans SC5314]
gi|46441703|gb|EAL00998.1| hypothetical protein CaO19.6766 [Candida albicans SC5314]
Length = 396
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 17 DRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSY 70
D T SGG +N PPSR L+VGNLS + E L + F GE+ + FQ + +
Sbjct: 200 DATQSGGINSSN-PPSRILFVGNLSFDTTEDLLEEHFRHCGEIVKIRMATFQDTGKCKGF 258
Query: 71 AFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
AFI+FK EE A ++K+ L LR+E+ +
Sbjct: 259 AFIDFKDEEGATTALKSKLTKMLINRKLRMEYGE 292
>gi|260949537|ref|XP_002619065.1| hypothetical protein CLUG_00224 [Clavispora lusitaniae ATCC 42720]
gi|238846637|gb|EEQ36101.1| hypothetical protein CLUG_00224 [Clavispora lusitaniae ATCC 42720]
Length = 416
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ------PGRSYAFINFKIEED 80
+ PPSR L+VGNLS + E NL + F G++ + + +AFI+FK E
Sbjct: 241 SKNPPSRILFVGNLSFDTTEDNLEEHFRHCGDIVRIRMATFEDTGKCKGFAFIDFKDESG 300
Query: 81 AIASMKALQGFPLAGNPLRIEF 102
A++K+ L PLR+E+
Sbjct: 301 PTAALKSKLAKKLINRPLRLEY 322
>gi|448520574|ref|XP_003868310.1| Ngr1 protein [Candida orthopsilosis Co 90-125]
gi|380352650|emb|CCG25406.1| Ngr1 protein [Candida orthopsilosis]
Length = 696
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 43/75 (57%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + ++VG LS + EA L F FG ++ + PG++ F+ + E+A ++ A+Q
Sbjct: 423 PNNTTVFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIGAMQ 482
Query: 90 GFPLAGNPLRIEFAK 104
GF + GN +R+ + +
Sbjct: 483 GFIIGGNRVRLSWGR 497
>gi|308459677|ref|XP_003092154.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
gi|308254084|gb|EFO98036.1| hypothetical protein CRE_20061 [Caenorhabditis remanei]
Length = 336
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQ 89
++VGNL ++ E + D F ++GE+ ++ + RS +AFI F DA +++A
Sbjct: 6 VYVGNLPSDVREKEIEDIFHKYGEIRNIDIK-SRSRDSPAFAFIQFDDRRDAKEAVRACD 64
Query: 90 GFPLAGNPLRIEF 102
G+ G LR+EF
Sbjct: 65 GYEFDGKRLRVEF 77
>gi|159478857|ref|XP_001697517.1| predicted protein [Chlamydomonas reinhardtii]
gi|158274396|gb|EDP00179.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1010
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 22 GGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF---------QPGRSYAF 72
GG P + +L+VGNLS +E L +F RFG + SV + GR+ F
Sbjct: 205 GGSFDHGDPFTTNLYVGNLSQETDEEVLKREFGRFGAIASVKVMWPRDEEQRRKGRNCGF 264
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+ F +DA +M+ LQG L GN L I + KA
Sbjct: 265 VGFMKRDDAEMAMRKLQGIILHGNELHIGWGKA 297
>gi|242089655|ref|XP_002440660.1| hypothetical protein SORBIDRAFT_09g004726 [Sorghum bicolor]
gi|241945945|gb|EES19090.1| hypothetical protein SORBIDRAFT_09g004726 [Sorghum bicolor]
Length = 94
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 20 HSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEE 79
HSG G L+VGN+S E +L F R+G L +V Q GR+Y F+ F +
Sbjct: 15 HSGQHGSTTK-----LYVGNMSRYTRERDLEAAFGRYGRLVTVYLQ-GRNYGFVVFYDPK 68
Query: 80 DAIASMKALQGFPLAGNPLRIEFAK 104
DA A+ L G + G+ + ++FA+
Sbjct: 69 DADAARNGLDGQEICGSHITVQFAR 93
>gi|401885820|gb|EJT49905.1| hypothetical protein A1Q1_00918 [Trichosporon asahii var. asahii
CBS 2479]
Length = 1177
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ A L F FG +ES +S F+NF+ + AI++ AL G
Sbjct: 500 PTRALWIGSIPSTTSSATLLQIFSPFGPVESARVLTHKSCGFVNFERLDSAISARNALNG 559
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ P+RI FA+
Sbjct: 560 RDILGSDIGPIRIGFARV 577
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 3 RGGGRERFRGGRFE-----DRTHSGGGGRANTP--PSRHLWVGNLSHNIEEANLTDQFLR 55
R G R+ RG R RT + ++TP P+R LW+GNL N L F
Sbjct: 332 REGSRD-LRGHRLSISSQNSRTGTPDNAGSSTPQMPTRSLWIGNLDVNATSEALLRVFSS 390
Query: 56 FGELESVAFQPGRSYAFINFKIEEDAI 82
+G +ES+ P ++ AF+NF + DA+
Sbjct: 391 YGAIESLRMLPEKTCAFVNFMDKADAV 417
>gi|380814182|gb|AFE78965.1| nucleolar protein 8 [Macaca mulatta]
Length = 1166
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS NI EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|380814180|gb|AFE78964.1| nucleolar protein 8 [Macaca mulatta]
Length = 1168
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS NI EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|355753465|gb|EHH57511.1| Nucleolar protein Nop132 [Macaca fascicularis]
Length = 1172
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS NI EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|406695685|gb|EKC98987.1| hypothetical protein A1Q2_06741 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1177
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ A L F FG +ES +S F+NF+ + AI++ AL G
Sbjct: 500 PTRALWIGSIPSTTSSATLLQIFSPFGPVESARVLTHKSCGFVNFERLDSAISARNALNG 559
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ P+RI FA+
Sbjct: 560 RDILGSDIGPIRIGFARV 577
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 3 RGGGRERFRGGRFE-----DRTHSGGGGRANTP--PSRHLWVGNLSHNIEEANLTDQFLR 55
R G R+ RG R RT + ++TP P+R LW+GNL N L F
Sbjct: 332 REGSRD-LRGHRLSISSQNSRTGTPDNAGSSTPQMPTRSLWIGNLDVNATSEALLRVFSS 390
Query: 56 FGELESVAFQPGRSYAFINFKIEEDAI 82
+G +ES+ P ++ AF+NF + DA+
Sbjct: 391 YGAIESLRMLPEKTCAFVNFMDKADAV 417
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ------PGRSYAFINFKIEEDAIASMKAL 88
L+VG+L+ N+ + ++ F FG++E V + YAF+ FK DA +M+ +
Sbjct: 452 LYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKM 511
Query: 89 QGFPLAGNPLRIEF 102
GF LAG LR+E
Sbjct: 512 NGFQLAGRALRVEI 525
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VGNL N+ E L L+FGE+ SV QPG+ + F+ F A +++ +QG +
Sbjct: 229 IFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIG 288
Query: 95 GNPLRIEFAK 104
+RI + +
Sbjct: 289 QQVVRISWGR 298
>gi|149242977|ref|XP_001526491.1| hypothetical protein LELG_03049 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450614|gb|EDK44870.1| hypothetical protein LELG_03049 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 356
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQ---PGRSYAFINFKIEEDAIA 83
PPSR L+VGNL + E NL + F G++ + FQ + +AFI+FK EE A+A
Sbjct: 160 PPSRILFVGNLGFDTTEDNLEEHFRHCGDIARIRMATFQDTGKCKGFAFIDFKKEEGAVA 219
Query: 84 SMKALQGFPLAGNPLRIEF 102
+M + + LR+E+
Sbjct: 220 AMNSKLTKMMLNRKLRLEY 238
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIA 83
G A P + ++VG ++ ++ E L D F GE+++V PGR AF+ F A
Sbjct: 195 GAHATDPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFAHRASAEH 254
Query: 84 SMKALQGFPLAGNPLRIEFAKA 105
+ +QG + G+ +R+ + K+
Sbjct: 255 VINNMQGTTVCGSCVRLSWGKS 276
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFL-RFGEL--ESVAFQP----GRSYAFINF 75
GG R P ++VG+LS + +A L FL ++ + V P +S+ FI F
Sbjct: 97 GGKRIEQAPEYSVFVGDLSPEVTDAELKATFLGKYTSVLGAKVVTNPMTGSSKSFGFIRF 156
Query: 76 KIEEDAIASMKALQGFPLAGNPLRI 100
E++ ++ A+ G G P+R+
Sbjct: 157 GDEQERDEALTAMNGAECCGRPIRV 181
>gi|402898000|ref|XP_003912023.1| PREDICTED: nucleolar protein 8 [Papio anubis]
Length = 1131
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS NI EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG------RSYAFINFKIEEDAIAS 84
PS L++GNLS +I E ++ + F GE+ V + + ++ F +E A A+
Sbjct: 304 PSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 363
Query: 85 MKALQGFPLAGNPLRIEFA 103
+ A+ G LAG PLR++F+
Sbjct: 364 LDAMTGQELAGRPLRLDFS 382
>gi|330814951|ref|XP_003291492.1| hypothetical protein DICPUDRAFT_82158 [Dictyostelium purpureum]
gi|325078337|gb|EGC31994.1| hypothetical protein DICPUDRAFT_82158 [Dictyostelium purpureum]
Length = 622
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
PS LW+G + NI L F++FG+++ + +YAFI F +DAI + L G
Sbjct: 263 PSEILWIGRIGSNINYEKLYQLFIKFGKVDYLHMVNDSNYAFIKFLDVKDAINAKLKLNG 322
Query: 91 FPLAGNPLRIEFAKA 105
G PL ++F K
Sbjct: 323 SLKFGAPLLVDFKKG 337
>gi|441593211|ref|XP_003260545.2| PREDICTED: nucleolar protein 8 isoform 1 [Nomascus leucogenys]
Length = 1168
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS NI EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + L+VGNL + +A LT F +G + + Q R YAF+ + A+++M LQ
Sbjct: 247 PDNCTLFVGNLGPYVTQAELTPLFQTYGYVTDIRMQADRGYAFVKLDTSQAAVSAMATLQ 306
Query: 90 GFPLAGNPLRIEFAK 104
+ G PL+I++ +
Sbjct: 307 NTMVQGRPLKIQWGR 321
Score = 35.4 bits (80), Expect = 4.3, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ------PGRSYAFINFKIEE 79
+ +T H++VG+LS + + L F FG + R Y F++F+ E
Sbjct: 100 KEDTQHHHHVFVGDLSPEVNDDVLAKAFGAFGSMSEARVMWDMNSGKSRGYGFLSFRKRE 159
Query: 80 DAIASMKALQGFPLAGNPLRIEFA 103
DA ++ + G L +R+ +A
Sbjct: 160 DAEQAINTMNGEWLGSRAIRVNWA 183
>gi|109112292|ref|XP_001102499.1| PREDICTED: nucleolar protein 8 isoform 2 [Macaca mulatta]
Length = 1166
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS NI EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQNISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|448091265|ref|XP_004197286.1| Piso0_004533 [Millerozyma farinosa CBS 7064]
gi|448095746|ref|XP_004198317.1| Piso0_004533 [Millerozyma farinosa CBS 7064]
gi|359378708|emb|CCE84967.1| Piso0_004533 [Millerozyma farinosa CBS 7064]
gi|359379739|emb|CCE83936.1| Piso0_004533 [Millerozyma farinosa CBS 7064]
Length = 581
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
SG G ++ PSR +++GN+ +I+ L D ++R G LESV P +S AFI+F +
Sbjct: 142 SGANGGSSVAPSRTVYLGNIPSDIQPNELLD-YVRSGILESVKIIPSKSCAFISFVDHQS 200
Query: 81 AIA--SMKALQGFPLAGNPLRIEFAKA 105
A+ S L+ + G+ +RI + K+
Sbjct: 201 ALLFHSDCILKKLSIKGHDIRIGWGKS 227
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSH-NIEEAN-LTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
SR++++GN++ AN L + F +FGE+E + F ++ AFINF +AI ++ ++
Sbjct: 473 SRNIYIGNITDFKYYNANKLREDFTKFGEVEQINFLEEKNCAFINFVNIANAIKAIDGIK 532
Query: 90 GFPLAGNPLRIEFAK 104
FP N L+I F K
Sbjct: 533 SFPDYKN-LKINFGK 546
>gi|345490930|ref|XP_001607958.2| PREDICTED: putative RNA-binding protein 15-like [Nasonia
vitripennis]
Length = 740
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ +WVG L A L +F RFG ++ + + G S A+I + + A
Sbjct: 346 GYGKAT--PTTRIWVGGLGPWTSVAQLEREFDRFGAIKKIDYIKGDSNAYILYDSIDAAQ 403
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A++K ++GFPL G LR++FA
Sbjct: 404 AAVKEMRGFPLGGPDRRLRVDFA 426
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
R G ++ P L+VGN+ +I+E +L F FGELE V Q R Y F
Sbjct: 258 RNSEASSGNKHSAPFHRLYVGNIHFSIDENDLQSVFEPFGELEFVQLQKDETGRSRGYGF 317
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ F+ A +++ + G+ L G +R+
Sbjct: 318 VQFRDPNQAREALEKMNGYDLGGRAIRV 345
>gi|42565781|ref|NP_190512.3| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|334185842|ref|NP_001190041.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|124301106|gb|ABN04805.1| At3g49430 [Arabidopsis thaliana]
gi|332645020|gb|AEE78541.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645022|gb|AEE78543.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 300
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D F ++G + + + P R Y F+ F+ DA ++K
Sbjct: 6 SRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ L G LR+E A
Sbjct: 66 DGYNLDGCRLRVELA 80
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
ER R T + R N P R L+VG+L NI E L F FG+++ +
Sbjct: 216 ERNRAAAQNASTSNSTLQRGNVGPMR-LYVGSLHFNITEEMLKGIFEPFGKIDKIELIKD 274
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ RS Y FI F EDA +++ L GF LAG P+++
Sbjct: 275 METNRSKGYGFITFHDSEDAKKALEQLNGFELAGRPMKV 313
>gi|448520521|ref|XP_003868297.1| hypothetical protein CORT_0C00140 [Candida orthopsilosis Co 90-125]
gi|380352637|emb|CCG25393.1| hypothetical protein CORT_0C00140 [Candida orthopsilosis]
Length = 327
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEEDAIA 83
PPSR L+VGNLS + E NL + F G++ + FQ + +AFI+FK E+ AI
Sbjct: 173 PPSRILFVGNLSFDTTEDNLREHFQHCGDIVRIRMATFQDTGKCKGFAFIDFKSEDGAIT 232
Query: 84 SMKALQGFPLAGNPLRIEFAK 104
+MK+ + LR+E+ +
Sbjct: 233 AMKSKLAKSMLNRKLRLEYGE 253
>gi|405965808|gb|EKC31162.1| STI1-like protein [Crassostrea gigas]
Length = 518
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 35 LWVGN-LSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPL 93
LWVGN L +++ L F R+G + SV P + AF+NFK +E A +M+ LQG
Sbjct: 353 LWVGNVLPDKVDDKKLLKIFSRYGPVTSVRTLPEKFCAFVNFKTKEAAGKAMQCLQGAEC 412
Query: 94 AGNPLRIEF 102
G L I+F
Sbjct: 413 GGQKLLIKF 421
>gi|392575824|gb|EIW68956.1| hypothetical protein TREMEDRAFT_73973 [Tremella mesenterica DSM
1558]
Length = 1232
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
P+R LW+GNL + +L F+ +G +ESV P ++ AF+NF + DA+
Sbjct: 426 PTRSLWIGNLDVSATNQSLLQVFMVYGAIESVRMLPEKTCAFVNFMDKADAV 477
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ + L F FG +ES + F+NF+ + A+A+ AL G
Sbjct: 559 PTRALWIGSIPATTSSSTLLQIFTPFGPVESARVLMHKCCGFVNFEHLDSAVAARSALNG 618
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ P+RI FA+
Sbjct: 619 RDILGSDIGPVRIGFARV 636
>gi|365988124|ref|XP_003670893.1| hypothetical protein NDAI_0F03320 [Naumovozyma dairenensis CBS 421]
gi|343769664|emb|CCD25650.1| hypothetical protein NDAI_0F03320 [Naumovozyma dairenensis CBS 421]
Length = 399
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS + + L F GE+ + F+ + +AF++FK EE
Sbjct: 232 SKNPPSRILFVGNLSFDTTDELLRKHFQHCGEIIKIRMATFEDSGKCKGFAFVDFKNEEG 291
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
A ++K +AG PLR+EF +
Sbjct: 292 ATNALKDKTCRKIAGRPLRMEFGE 315
>gi|157131668|ref|XP_001655916.1| RNA recognition motif protein split ends [Aedes aegypti]
gi|108871456|gb|EAT35681.1| AAEL012171-PA [Aedes aegypti]
Length = 663
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ +WVG L L +F RFG ++ + + G + AFI + + A
Sbjct: 279 GYGKAT--PTTRIWVGGLGAWTSVTQLEREFDRFGAIKKIEYNKGDTQAFILYDSIDAAT 336
Query: 83 ASMKALQGFPLAGNP---LRIEFA 103
A++K ++GFPL G P +RI+FA
Sbjct: 337 AAVKEMRGFPL-GAPDRRIRIDFA 359
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
ER R T + R N P R L+VG+L NI E L F FG+++ +
Sbjct: 228 ERNRAAAQNASTSNSTLQRGNVGPMR-LYVGSLHFNITEEMLKGIFEPFGKIDKIELIKD 286
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ RS Y FI F EDA +++ L GF LAG P+++
Sbjct: 287 METNRSKGYGFITFHDSEDAKKALEQLNGFELAGRPMKV 325
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 8/86 (9%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF-------QPGRSYAFINFKI 77
G + PS L++GNLS + + NL + F +FGE+ SV QP + + ++ +
Sbjct: 242 GDVPSEPSDTLFLGNLSFDADRDNLYEIFGKFGEIISVRIPTHPETEQP-KGFGYVQYTN 300
Query: 78 EEDAIASMKALQGFPLAGNPLRIEFA 103
EDA ++ ALQG + P+R++F+
Sbjct: 301 TEDAKKALDALQGESINDRPVRLDFS 326
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VGNL N+ E L L+FGE+ SV QPG+ + F+ F A +++ +QG +
Sbjct: 229 IFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKMQGKMIG 288
Query: 95 GNPLRIEFAK 104
+RI + +
Sbjct: 289 QQVVRISWGR 298
>gi|354545611|emb|CCE42339.1| hypothetical protein CPAR2_808880 [Candida parapsilosis]
Length = 739
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VG LS + EA L F FG ++ + PG++ F+ + E+A ++ A+QGF +
Sbjct: 478 VFVGGLSSEVTEATLFTLFKPFGVIQQIKIPPGKNCGFVKYSTREEAERTIAAMQGFIIG 537
Query: 95 GNPLRIEFAKA 105
GN +R+ + K
Sbjct: 538 GNRVRLSWGKV 548
>gi|88603697|ref|YP_503875.1| RNA recognition motif-containing protein [Methanospirillum hungatei
JF-1]
gi|88189159|gb|ABD42156.1| RNA-binding region RNP-1 (RNA recognition motif) [Methanospirillum
hungatei JF-1]
Length = 105
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
+ L+VGNL+++++E L D F ++G++ SV + + F+ E+A A+M AL
Sbjct: 4 KRLYVGNLTYSVKEDQLKDLFSQYGDVVSVKIIEQKGFGFVEMGTSEEAQAAMDALNQTV 63
Query: 93 LAGNPLRIEFAK 104
G +RI+ A+
Sbjct: 64 FEGRTMRIDEAR 75
>gi|313232695|emb|CBY19365.1| unnamed protein product [Oikopleura dioica]
Length = 223
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R WVGNLS + E L + FL+ G LE V +++AFI F + ++KAL
Sbjct: 8 RTCWVGNLSDKVTEEILFELFLQIGPLEDVTKPKNKNFAFILFTHKRSTTYAVKALNNVS 67
Query: 93 LAGNPLRIEF 102
L G + ++F
Sbjct: 68 LFGQTIHVKF 77
>gi|410901365|ref|XP_003964166.1| PREDICTED: uncharacterized protein LOC101078680 [Takifugu rubripes]
Length = 498
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P R LWVGN++ + E +L D F G++ES+ R AF+NFK + A +M+ L G
Sbjct: 355 PCRSLWVGNVTTELTEKHLWDLFKACGDIESIRVLHERFCAFVNFKSADAAAHAMEKLNG 414
Query: 91 FPLAGNPLRIEF 102
+ + L + +
Sbjct: 415 YCIKNTRLVVRY 426
>gi|159163837|pdb|2CPD|A Chain A, Solution Structure Of The Rna Recognition Motif Of Human
Apobec-1 Complementation Factor, Acf
Length = 99
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 21 SGGGGRANTPPS-RHLWVGNLSHNIEEANLTDQF--LRFGELESVAFQPGRSYAFINFKI 77
SG G +T S + L+V NL + E + +F ++ G +E V + R YAF++F
Sbjct: 3 SGSSGDEDTMSSVKILYVRNLMLSTSEEMIEKEFNNIKPGAVERV--KKIRDYAFVHFSN 60
Query: 78 EEDAIASMKALQGFPLAGNPLRIEFAK 104
EDA+ +MKAL G L G+P+ + AK
Sbjct: 61 REDAVEAMKALNGKVLDGSPIEVTLAK 87
>gi|47223958|emb|CAG06135.1| unnamed protein product [Tetraodon nigroviridis]
Length = 227
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG 67
++++ FED H G S L V NL + +++L + F FG L+ +
Sbjct: 69 DKWQHDMFED--HEDGAPAGEAEGSAKLLVSNLDFGVSDSDLRELFAEFGPLKEASIHYD 126
Query: 68 RS-----YAFINFKIEEDAIASMKALQGFPLAGNPLRIE 101
RS A ++F+ + DAI +MK G PL G P++I+
Sbjct: 127 RSGRSKGTADVHFQHKADAIKAMKQYNGVPLDGQPMKIQ 165
>gi|302754352|ref|XP_002960600.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
gi|302771648|ref|XP_002969242.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300162718|gb|EFJ29330.1| hypothetical protein SELMODRAFT_15428 [Selaginella moellendorffii]
gi|300171539|gb|EFJ38139.1| hypothetical protein SELMODRAFT_25552 [Selaginella moellendorffii]
Length = 197
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFG--ELESVAFQ----PGRSYAFINFK 76
G R+ P+ L+VGN++ N++ L D F G ELE V + R +AF+
Sbjct: 8 GSFRSEPAPNTKLYVGNIAWNVDSKMLADCFNGVGITELEEVMYDRMLGKSRGFAFVTLS 67
Query: 77 IEEDAIASMKALQGFPLAGNPLRIEFAKA 105
E+ A +++ L G L G PLR+ + +
Sbjct: 68 TEDAAKTAIEKLDGHELEGRPLRVNYPQV 96
>gi|299469752|emb|CBN76606.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 330
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKALQGF 91
+++GNL ++ E ++ D F +FG + + + P R ++ FI F+ DA +++A G+
Sbjct: 4 IYIGNLPMDVTEKDMDDVFYKFGRIVDIDLKTPARPPAFGFITFQDARDAEEAVRARDGY 63
Query: 92 PLAGNPLRIEFAK 104
+ G+ LR+E ++
Sbjct: 64 DMDGSRLRVEISR 76
>gi|255646543|gb|ACU23746.1| unknown [Glycine max]
Length = 310
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D FL++G + + + P R YAF+ F+ +DA +++
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ LR+E A
Sbjct: 66 DGYDFDGHRLRVEPA 80
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG------RSYAFINFKIEEDAIAS 84
PS L++GNLS +I E ++ + F GE+ V + + ++ F +E A A+
Sbjct: 300 PSSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 359
Query: 85 MKALQGFPLAGNPLRIEFA 103
+ A+ G LAG PLR++F+
Sbjct: 360 IDAMTGQELAGRPLRLDFS 378
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS------YAFINFKIEEDAIASM 85
+ +WVG LS N++ L + FGE+ S Q R+ + +++F A +
Sbjct: 202 TNQIWVGQLSWNVDNEWLKSEMEAFGEVTSARVQLDRTTGKSRGFGYVDFATAAAAKKAF 261
Query: 86 KALQGFPLAGNPLRIEFA 103
+ QG + G +RI+ +
Sbjct: 262 EEGQGKEVDGRAIRIDLS 279
>gi|12324445|gb|AAG52185.1|AC012329_12 putative splicing factor; 53460-55514 [Arabidopsis thaliana]
Length = 295
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D F ++G + + + P R Y F+ F+ DA ++K
Sbjct: 6 SRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ L G LR+E A
Sbjct: 66 DGYNLDGCRLRVELA 80
>gi|328874752|gb|EGG23117.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 304
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 27 ANT-PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEE 79
ANT PPSR L V L+ E++L F ++G+LE V + R YAFI F +E
Sbjct: 105 ANTAPPSRVLGVFGLNPRTTESDLDQVFSKYGKLEKVNLIRDRQTRSSRCYAFIYFDNKE 164
Query: 80 DAIASMKALQGFPLAGNPLRIEFAKA 105
DA+++ + L G +RI+++ +
Sbjct: 165 DAVSAKEGSLSLELDGRVIRIDYSAS 190
>gi|354545626|emb|CCE42354.1| hypothetical protein CPAR2_809030 [Candida parapsilosis]
Length = 345
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEEDAIA 83
PPSR L+VGNLS + E NL + F G++ + FQ + +AFI+FK E+ AI
Sbjct: 172 PPSRILFVGNLSFDTTEDNLREHFQHCGDIVRIRMATFQDTGKCKGFAFIDFKSEDGAIT 231
Query: 84 SMKALQGFPLAGNPLRIEFAK 104
+MK+ + LR+E+ +
Sbjct: 232 AMKSKLAKSMLNRKLRLEYGE 252
>gi|5823575|emb|CAB53757.1| putative protein [Arabidopsis thaliana]
gi|7267966|emb|CAB78307.1| putative protein [Arabidopsis thaliana]
Length = 695
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 28 NTPPSRHLWVG-NLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
N PS L++G S +++A L + F FGE+ V PGRSYAF+ F+ A + +
Sbjct: 18 NAEPSEVLYIGFPASLKVDDALLRNVFSSFGEITKVTVFPGRSYAFVQFRNLMAACKAKE 77
Query: 87 ALQGFPLAGNP-LRIEFAKA 105
+LQG L GNP + I FAK+
Sbjct: 78 SLQG-KLFGNPRVHICFAKS 96
>gi|6561944|emb|CAB62448.1| PRE-MRNA SPLICING FACTOR SF2-like protein [Arabidopsis thaliana]
Length = 243
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D F ++G + + + P R Y F+ F+ DA ++K
Sbjct: 6 SRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ L G LR+E A
Sbjct: 66 DGYNLDGCRLRVELA 80
>gi|156843476|ref|XP_001644805.1| hypothetical protein Kpol_1041p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156115456|gb|EDO16947.1| hypothetical protein Kpol_1041p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 384
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS + + L F GE+ + FQ + +AF++FK EE
Sbjct: 216 SKNPPSRILFVGNLSFDTTDDLLRKHFQHCGEIIKIRMATFQDTGKCKGFAFVDFKNEEG 275
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
A ++ +AG PLR+EF +
Sbjct: 276 ATKALTDKSCRKIAGRPLRMEFGE 299
>gi|268563921|ref|XP_002647045.1| C. briggsae CBR-RSP-3 protein [Caenorhabditis briggsae]
Length = 234
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR--SYAFINFKIEEDAIASMKALQ 89
+ ++VGNL ++ + + D F ++G ++ + + GR ++AFI F+ DA +++A
Sbjct: 7 DQKVYVGNLPADVRDKEVEDIFHKYGRIKYIDVKSGRGPAFAFIEFEDNRDAEDAVRARD 66
Query: 90 GFPLAGNPLRIEFAK 104
G+ G +R+EF +
Sbjct: 67 GYEFDGRRIRVEFTR 81
>gi|224131664|ref|XP_002321147.1| predicted protein [Populus trichocarpa]
gi|222861920|gb|EEE99462.1| predicted protein [Populus trichocarpa]
Length = 120
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Query: 26 RANTPPSRH-LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIE 78
+A+ P + + L+V LS +++E +L D F FG++ V GRS + F++F E
Sbjct: 10 KAHNPATNNKLFVAGLSWSVDEKSLKDAFSSFGDVTEVNILYDRNSGRSRGFGFVSFCKE 69
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
++A+++ A+ G L G PLRI +A
Sbjct: 70 DEAVSAKDAMDGKALLGRPLRISYA 94
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP------GRSYAFINFKIEE 79
+ N+ P R L+VG+L +NI EA L F FG+++++ + Y FI F E
Sbjct: 299 KVNSGPMR-LYVGSLHYNITEAMLRGIFEPFGKIDNIQLMMDTDANRSKGYGFITFHDAE 357
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA ++ L GF LAG P+++
Sbjct: 358 DAKRALDQLNGFELAGRPMKV 378
>gi|452822290|gb|EME29311.1| splicing factor, arginine/serine-rich 7 [Galdieria sulphuraria]
Length = 258
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R L+VGN+S + +L D F ++G + V YAF+ E DA + L G
Sbjct: 2 PTRKLYVGNVSRHATRRDLEDLFSKYGRVRDVRLL--SDYAFVEMGDERDAEDARYYLDG 59
Query: 91 FPLAGNPLRIEFAK 104
L G +R+EFAK
Sbjct: 60 KRLEGERIRVEFAK 73
>gi|149242856|ref|XP_001526474.1| hypothetical protein LELG_03032 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450597|gb|EDK44853.1| hypothetical protein LELG_03032 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 692
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VG LS + EA L F FG + + PG++ F+ + E+A ++ A+QGF +
Sbjct: 356 VFVGGLSSEVTEATLFTLFKPFGTILQIKIPPGKNCGFVKYATREEAEETISAMQGFIIG 415
Query: 95 GNPLRIEFAKA 105
GN +R+ + +
Sbjct: 416 GNRVRLSWGRV 426
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG------RSYAFINFKIEEDAIAS 84
PS L++GNLS ++ E ++ + F GE+ V + + ++ F +E A A+
Sbjct: 310 PSSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAA 369
Query: 85 MKALQGFPLAGNPLRIEFA 103
+ A+ G LAG PLR++F+
Sbjct: 370 IDAMTGQELAGRPLRLDFS 388
>gi|25150290|ref|NP_499649.2| Protein RSP-3 [Caenorhabditis elegans]
gi|56749665|sp|Q9NEW6.2|RSP3_CAEEL RecName: Full=Probable splicing factor, arginine/serine-rich 3;
AltName: Full=CeSF2; AltName: Full=CeSF2/ASF
gi|21615505|emb|CAC35847.2| Protein RSP-3 [Caenorhabditis elegans]
Length = 258
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR--SYAFINFKIEEDAIASMKALQ 89
+ ++VGNL ++ E + D F ++G ++ V + GR ++AF+ F+ DA +++A
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 90 GFPLAGNPLRIEFA 103
G+ G +R+EF
Sbjct: 68 GYEFDGRRIRVEFT 81
>gi|356572736|ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
Length = 309
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D FL++G + + + P R YAF+ F+ +DA +++
Sbjct: 6 SRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ LR+E A
Sbjct: 66 DGYDFDGHRLRVEPA 80
>gi|308459689|ref|XP_003092160.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
gi|308254090|gb|EFO98042.1| hypothetical protein CRE_20046 [Caenorhabditis remanei]
Length = 333
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQ 89
++VGNL ++ E + D F ++GE+ ++ + RS +AFI F DA +++A
Sbjct: 6 VYVGNLPSDVREKEIEDIFHKYGEIRNIDIK-SRSRDSPAFAFIQFDDRRDAKEAVRARD 64
Query: 90 GFPLAGNPLRIEF 102
G+ G LR+EF
Sbjct: 65 GYEFDGKRLRVEF 77
>gi|301072399|gb|ADK56161.1| RNA-binding protein [Helicoverpa armigera]
Length = 166
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 1 SGRGGGRERFRGGRFEDRTHSGGGGRANTP-PSRH-----LWVGNLSHNIEEANLTDQFL 54
+G GG ER GR++ G G NTP P R L+V N+ +E ++ +QF
Sbjct: 42 TGSGGASERGNRGRYDSLAPEGDG---NTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFS 98
Query: 55 RFGELESVAFQPGR------SYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
FGE++++ R YA + ++ + A ++ +AL G + G P+ +++
Sbjct: 99 EFGEIKNIHLNLDRRTGFLKGYALVEYETYKQAASAREALDGADILGQPISVDWC 153
>gi|296005347|ref|XP_002809001.1| U1 small nuclear ribonucleoprotein a, putative [Plasmodium
falciparum 3D7]
gi|225631938|emb|CAX64282.1| U1 small nuclear ribonucleoprotein a, putative [Plasmodium
falciparum 3D7]
Length = 449
Score = 49.3 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P + L+V N+ N++ D F + P R+ AF++F E A +MKA+Q
Sbjct: 375 PYKILFVENVVENVDTQAFNDLFKNYAGFVEARIIPQRNVAFVDFTDETTATFAMKAVQN 434
Query: 91 FPLAGNPLRIEFAK 104
+ L G+ L+I +AK
Sbjct: 435 YELQGSKLKISYAK 448
>gi|353238970|emb|CCA70899.1| related to polyadenylate-binding protein [Piriformospora indica DSM
11827]
Length = 944
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + ++VG LS I E L F FG + V PG+S F+ F + DA +++AL
Sbjct: 399 PQNTTVFVGGLSPLISEETLRTFFAPFGAIHYVKVPPGKSCGFVQFVKKSDAERAIEALS 458
Query: 90 GFPLAGNPLRIEFAK 104
GF +AG+ +R+ + +
Sbjct: 459 GFSIAGSKVRLSWGR 473
>gi|390980746|pdb|2YKA|A Chain A, Rrm Domain Of Mrna Export Adaptor Ref2-I Bound To Hvs
Orf57 Peptide
Length = 124
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 17 DRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YA 71
D SG GG L V NL + +A++ + F FG L+ A RS A
Sbjct: 20 DLFDSGCGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTA 79
Query: 72 FINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
++F+ DA+ +MK +G PL G P+ I+
Sbjct: 80 DVHFERRADALKAMKQYKGVPLDGRPMDIQLV 111
>gi|47206459|emb|CAF93650.1| unnamed protein product [Tetraodon nigroviridis]
Length = 602
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 5/77 (6%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR----SYAFINFKIEEDAIASMKAL 88
+L++GNL N+ EA L F ++G +E V + P R +YAF+ F+ + A + A+
Sbjct: 189 NLFIGNLDGNVTEAELRRGFDKYGIIEDVVIKRPARGQGGAYAFVKFQNLDMAHRAKVAM 248
Query: 89 QGFPLAGNPLRIEFAKA 105
QG + GNP++I + KA
Sbjct: 249 QGRLIGGNPIKIGYGKA 265
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+AN P+ LWVG L A L +F RFG + ++ + G S+A+I ++ + A
Sbjct: 261 GYGKAN--PTTRLWVGGLGPGNSLAALAREFDRFGSIRNIDYVKGDSFAYIQYESLDAAQ 318
Query: 83 ASMKALQGF 91
A+ ++GF
Sbjct: 319 AACTQMRGF 327
>gi|331242735|ref|XP_003334013.1| RNA-binding protein rsd1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 546
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ------PGRSYAFINFKIEEDAIASMKAL 88
L+VG+L+ N+ + ++ F FG++E V + YAF+ FK DA +M+ +
Sbjct: 426 LYVGSLNFNLTDDDIRQVFQPFGDIEYVDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKM 485
Query: 89 QGFPLAGNPLRIEF 102
GF LAG LR+E
Sbjct: 486 NGFQLAGRALRVEI 499
>gi|317454987|pdb|2KT5|A Chain A, Rrm Domain Of Mrna Export Adaptor Ref2-I Bound To Hsv-1
Icp27 Peptide
Length = 124
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 17 DRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YA 71
D SG GG L V NL + +A++ + F FG L+ A RS A
Sbjct: 20 DLFDSGCGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTA 79
Query: 72 FINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
++F+ DA+ +MK +G PL G P+ I+
Sbjct: 80 DVHFERRADALKAMKQYKGVPLDGRPMDIQLV 111
>gi|321462197|gb|EFX73222.1| hypothetical protein DAPPUDRAFT_14394 [Daphnia pulex]
Length = 263
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S LWVG+LS +++ L+D F ++GE+ S+ P R AF+ +DA ++ L G
Sbjct: 142 STTLWVGHLSKLVQQEELSDTFGQYGEILSIDLIPPRGCAFVCMHRRQDAYRALTKLAGH 201
Query: 92 PLAGNPLRIEFA 103
L G + + +A
Sbjct: 202 KLQGKAITLAWA 213
>gi|367002824|ref|XP_003686146.1| hypothetical protein TPHA_0F02310 [Tetrapisispora phaffii CBS 4417]
gi|357524446|emb|CCE63712.1| hypothetical protein TPHA_0F02310 [Tetrapisispora phaffii CBS 4417]
Length = 400
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS + + L F G++ + FQ + +AF++FK EE
Sbjct: 227 SKNPPSRILFVGNLSFDTTDELLRKHFQHCGDIVKIRMATFQDSGKCKGFAFVDFKNEEG 286
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
A ++ +AG PLR+EF +
Sbjct: 287 ATKALSDKSCRKIAGRPLRMEFGE 310
>gi|307195359|gb|EFN77277.1| RNA-binding protein 39 [Harpegnathos saltator]
Length = 370
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
+ T P R L+VG+L NI E L F FG+++++ + GRS Y F+ F+ +
Sbjct: 103 KGQTGPMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNAD 161
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA +++ L GF LAG P+++
Sbjct: 162 DAKKALEQLNGFELAGRPMKV 182
>gi|187735468|ref|YP_001877580.1| RNP-1 like RNA-binding protein [Akkermansia muciniphila ATCC
BAA-835]
gi|187425520|gb|ACD04799.1| RNP-1 like RNA-binding protein [Akkermansia muciniphila ATCC
BAA-835]
Length = 221
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVA--FQP----GRSYAFINFKIEEDAIASM 85
+R L+VGNLS+ E++L D F GE+ SV + P + YAF+ K EDAI S+
Sbjct: 98 NRRLYVGNLSYEATESDLEDVFKGIGEVNSVEIIYNPRTHKSKGYAFVEMKKMEDAIRSV 157
Query: 86 KALQGFPLAGNPLRI 100
L P G L +
Sbjct: 158 DILHNQPFMGRNLLV 172
>gi|86438313|gb|AAI12618.1| NOL8 protein [Bos taurus]
Length = 294
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKIEE-DAIA 83
+ L+VG L NI EA+L +QF RFGE+ V P + +A+IN ++ E D
Sbjct: 8 KRLFVGGLGQNISEADLQNQFGRFGEVSDVEIITRKDDQGNPQKVFAYINIRVTEADLKK 67
Query: 84 SMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 68 CMSVLNKTKWKGGTLQIQLAK 88
>gi|213404018|ref|XP_002172781.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
gi|212000828|gb|EEB06488.1| RNA-binding protein [Schizosaccharomyces japonicus yFS275]
Length = 485
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
Query: 2 GRGGGRERFRGG--RFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGEL 59
G+ GG + G F DR + AN PPS + +GNL + +L D F FG++
Sbjct: 250 GQYGGPAGYNAGPNDFVDRAY------ANGPPSPIIHIGNLPWLTVDQDLLDLFNSFGKI 303
Query: 60 E--SVAFQP-GRSYAF--INFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
E ++A++P GRS F + F+ +A ++++ L G+ PL+I +A+
Sbjct: 304 ERAAIAYEPSGRSRGFGVVQFQTTPEAASAIEKLNGYVYGNRPLQISYAR 353
>gi|431907193|gb|ELK11259.1| Putative RNA-binding protein 23 [Pteropus alecto]
Length = 914
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 224 EKNRLAAMANNLQKGSGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 277
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 278 SDTGRSKGYGFITFSESECARRALEQLNGFELAGRPMRV 316
>gi|241240909|ref|XP_002401786.1| hypothetical protein IscW_ISCW005052 [Ixodes scapularis]
gi|215496241|gb|EEC05881.1| hypothetical protein IscW_ISCW005052 [Ixodes scapularis]
Length = 642
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 7/93 (7%)
Query: 13 GRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAF 72
G+F+ + G G+A PS +WVG L A+L +F RFG + + + G ++A+
Sbjct: 317 GKFQCKI---GYGKAT--PSMRIWVGGLGSWTSLAHLEREFDRFGAIRKIDWVKGENHAY 371
Query: 73 INFKIEEDAIASMKALQGFPLAG--NPLRIEFA 103
+ + + A A+ + ++GFPL G LR++FA
Sbjct: 372 LQYDSIDAAQAACQEMRGFPLGGPDKRLRVDFA 404
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGR--SYAFINF 75
+R L+VGNL I EA+L F R+G +E V + PG+ +YAFI F
Sbjct: 250 TRTLFVGNLEVTISEADLRRIFERYGVVEDVDVKRPPPGQGNAYAFIKF 298
>gi|451997861|gb|EMD90326.1| hypothetical protein COCHEDRAFT_1106708 [Cochliobolus
heterostrophus C5]
Length = 455
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
+VGNL+ +A+L F FG + FQ R +AFI E+A ++ L G+ +
Sbjct: 277 CYVGNLTPYTSQADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVN 336
Query: 95 GNPLRIEFAK 104
G PL+ + K
Sbjct: 337 GRPLKCSWGK 346
>gi|396479838|ref|XP_003840852.1| similar to RNA binding protein Jsn1 [Leptosphaeria maculans JN3]
gi|312217425|emb|CBX97373.1| similar to RNA binding protein Jsn1 [Leptosphaeria maculans JN3]
Length = 1126
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+GN+ + ++L F +G +ES ++ F+NF+ E A+ + L G
Sbjct: 446 PTRSLWLGNIPSSTTVSSLNVIFANYGAIESTRVLTHKNCGFVNFETLESAVNAKSTLNG 505
Query: 91 ---FPLAGNPLRIEFAK 104
FP AG P+RI +AK
Sbjct: 506 KEIFPGAG-PVRIGYAK 521
>gi|116180414|ref|XP_001220056.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
gi|88185132|gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium globosum CBS 148.51]
Length = 475
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIE 78
G +PPS L+VGNL + +E+++++ F +++S+ + GR +A++ F
Sbjct: 318 GDVISPPSDTLFVGNLPFSADESSVSNYFNEVAQVQSLRIPTDQESGRPKGFAYVTFSSI 377
Query: 79 EDAIASMKALQGFPLAGNPLRIEFAK 104
+DA +AL G L G P+R+++AK
Sbjct: 378 DDAKKVFEALNGGDLDGRPVRLDYAK 403
>gi|242013147|ref|XP_002427276.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511617|gb|EEB14538.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 800
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ +WVG L L +F RFG ++ + + G + A+I + + A
Sbjct: 397 GYGKAT--PTTRIWVGGLGQWTSIQQLEREFDRFGAIKKIDYIKGDNSAYIQYDSIDAAQ 454
Query: 83 ASMKALQGFPLAG--NPLRIEFAKA 105
A++K ++GFPL G + LR++FA
Sbjct: 455 AAVKEMRGFPLGGMEHRLRVDFADV 479
>gi|451847206|gb|EMD60514.1| hypothetical protein COCSADRAFT_29739 [Cochliobolus sativus ND90Pr]
Length = 506
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
+VGNL+ +A+L F FG + FQ R +AFI E+A ++ L G+ +
Sbjct: 309 CYVGNLTPYTSQADLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVN 368
Query: 95 GNPLRIEFAK 104
G PL+ + K
Sbjct: 369 GRPLKCSWGK 378
>gi|449456443|ref|XP_004145959.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor SF2-like
[Cucumis sativus]
Length = 248
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKAL 88
SR ++VGNL +I+E + D F ++G + + + P R Y F+ F+ DA +++A
Sbjct: 6 SRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRAR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G LR+E A
Sbjct: 66 DGYNFDGCRLRVELA 80
>gi|145332797|ref|NP_001078264.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
gi|332645021|gb|AEE78542.1| putative Pre-mRNA splicing factor SF2 [Arabidopsis thaliana]
Length = 297
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D F ++G + + + P R Y F+ F+ DA ++K
Sbjct: 6 SRSIYVGNLPGDIREHEIEDIFYKYGRIVDIELKVPPRPPCYCFVEFEHSRDAEDAIKGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ L G LR+E A
Sbjct: 66 DGYNLDGCRLRVELA 80
>gi|449522400|ref|XP_004168214.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
sativus]
Length = 106
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKAL 88
SR ++VGNL +I+E + D F ++G + + + P R Y F+ F+ DA +++A
Sbjct: 6 SRTIYVGNLPSDIKEYEIEDLFYKYGRILDIELKIPPRPPCYCFVEFESVRDAEDAIRAR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G LR+E A
Sbjct: 66 DGYNFDGCRLRVELA 80
>gi|224085256|ref|XP_002307525.1| predicted protein [Populus trichocarpa]
gi|222856974|gb|EEE94521.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV------AFQPGRSYAFINFK 76
G A P+ L+VG+L HN+ E L D F + ++ S+ A + YA++NF
Sbjct: 13 GTAEAGQFPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFS 72
Query: 77 IEEDAIASMKALQGFPLAGNPLRI 100
+DA +M+ L PL G +RI
Sbjct: 73 NPQDAANAMELLNFTPLNGKAIRI 96
>gi|323335915|gb|EGA77193.1| Nop13p [Saccharomyces cerevisiae Vin13]
Length = 235
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS ++ + L F G++ + F+ + +AFI+FK EE
Sbjct: 65 SKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEG 124
Query: 81 AIASMKALQGFPLAGNPLRIE 101
+ ++K +AG PLR+E
Sbjct: 125 STNALKDKSCRKIAGRPLRME 145
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
+ N+ P R L+VG+L NI E L F FG+++++ + GRS Y FI F E
Sbjct: 250 KGNSGPMR-LYVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAE 308
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA +++ L GF LAG P+++
Sbjct: 309 DAKKALEQLNGFELAGRPMKV 329
>gi|444315572|ref|XP_004178443.1| hypothetical protein TBLA_0B00810 [Tetrapisispora blattae CBS 6284]
gi|387511483|emb|CCH58924.1| hypothetical protein TBLA_0B00810 [Tetrapisispora blattae CBS 6284]
Length = 389
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGE---LESVAFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS++ + L F GE + + F+ + ++FI+F EE
Sbjct: 216 SKNPPSRILFVGNLSYDTTDELLRSHFQHCGEIVKIRTATFEDTGKCKGFSFIDFLTEES 275
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
A ++K +AG P+R+E+ +
Sbjct: 276 ATKALKDKSCRKIAGRPIRMEYGE 299
>gi|195429948|ref|XP_002063019.1| GK21698 [Drosophila willistoni]
gi|194159104|gb|EDW74005.1| GK21698 [Drosophila willistoni]
Length = 558
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L++GNL N +E++L + F FGE++ + P +++ F+ + ++A+ + AL G
Sbjct: 123 LYIGNLGANTKESDLRELFKPFGEIDDIFSNPRKNFTFLRVDLYDNAVKAKLALDGSMYD 182
Query: 95 GNPLRIEFA 103
G LR+ FA
Sbjct: 183 GRQLRVSFA 191
>gi|195999148|ref|XP_002109442.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190587566|gb|EDV27608.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 296
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 37 VGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKALQG 90
V NLS + +EA+LTD F FG++ V + + +AFIN+K EDA ++ L G
Sbjct: 219 VSNLSEDADEADLTDLFRHFGQISRVFLVRDKKTRRSKCFAFINYKNREDAAYAISQLNG 278
Query: 91 FPLAGNPLRIEFAK 104
F L +E+AK
Sbjct: 279 FAYDHLLLDVEWAK 292
>gi|71033489|ref|XP_766386.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353343|gb|EAN34103.1| hypothetical protein TP01_0865 [Theileria parva]
Length = 343
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-----SYAFINFKIE 78
GG+AN PS ++VGNL ++E ++ D F +FGE++ + + G+ SYAFI F
Sbjct: 5 GGKANRSPS-CVFVGNLPDRVDERDIQDLFDKFGEIKDIDIKHGKTSNYTSYAFIEFASV 63
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
A ++ + G+ LR+EFA
Sbjct: 64 RSAEDAVDSRDGYEYDRYRLRVEFA 88
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VGN+ N+ + +L F RFG ++ V FQ R +AF+ E+A ++ LQ +
Sbjct: 226 IYVGNIPLNVSQNDLVQPFQRFGYVQEVKFQADRGFAFVKMDTHENAANAIVHLQNMSIN 285
Query: 95 GNPLRIEFAK 104
GN ++ + K
Sbjct: 286 GNVTKLSWGK 295
Score = 35.0 bits (79), Expect = 6.0, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES--VAFQP----GRSYAFINFKIEE 79
+ +T H++VG+L+ I + L F FG + V + P R + F+ F+ +
Sbjct: 110 KEDTTNHFHVFVGDLAAEINDEKLAQAFSEFGTMSEAHVMWDPLSGKSRGFGFVAFRDKT 169
Query: 80 DAIASMKALQGFPLAGNPLRIEFA 103
DA ++ + G L P+R +A
Sbjct: 170 DAERAIATMNGEWLGTRPIRCNWA 193
>gi|157138134|ref|XP_001664142.1| peptidyl-prolyl cis-trans isomerase e, ppie [Aedes aegypti]
gi|108869557|gb|EAT33782.1| AAEL013948-PA [Aedes aegypti]
Length = 304
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMK 86
R ++VG LS + E + D F+ FG+L + Q R +AFI F+ EDA A++
Sbjct: 6 RTVYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFESAEDAAAAVD 65
Query: 87 ALQGFPLAGNPLRIEFAK 104
+ L G +R+ AK
Sbjct: 66 NMNDSELCGRTIRVNIAK 83
>gi|84998374|ref|XP_953908.1| splicing factor (SR protein) [Theileria annulata]
gi|65304906|emb|CAI73231.1| splicing factor (SR protein), putative [Theileria annulata]
Length = 341
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-----SYAFINFKIE 78
GG+AN PS ++VGNL ++E ++ D F +FGE++ V + G+ SYAFI F
Sbjct: 5 GGKANRSPS-CVFVGNLPDRVDERDIHDLFDKFGEIKDVDIKHGKTSNYTSYAFIEFASV 63
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
A ++ + G+ LR+EFA
Sbjct: 64 RSAEDAVDSRDGYEYDRYRLRVEFA 88
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 37/70 (52%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VGNL N E +L FL+ GE+ SV GR F+ F A +++ +QG +
Sbjct: 232 IFVGNLDPNATEEDLRQTFLQLGEIASVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVIG 291
Query: 95 GNPLRIEFAK 104
P+RI + K
Sbjct: 292 QQPVRISWGK 301
>gi|170043665|ref|XP_001849498.1| RNA and export factor binding protein [Culex quinquefasciatus]
gi|167867015|gb|EDS30398.1| RNA and export factor binding protein [Culex quinquefasciatus]
Length = 290
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMK 86
S L V NL + E+++ + F FG L+S + RS A + F+ DAI +MK
Sbjct: 125 STKLMVSNLDFGVSESDINELFADFGPLKSASVHYDRSGRSLGTADVVFERRADAIKAMK 184
Query: 87 ALQGFPLAGNPLRIEFAKA 105
G PL G P+ I+ A +
Sbjct: 185 QYNGVPLDGRPMSIQLATS 203
>gi|392567132|gb|EIW60307.1| hypothetical protein TRAVEDRAFT_70736 [Trametes versicolor
FP-101664 SS1]
Length = 1299
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
SG + + P+R LW+G++ A + F +G +ES ++ FINF+ +D
Sbjct: 565 SGMDAQLQSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDD 624
Query: 81 AIASMKALQGFPLAGN---PLRIEFAKA 105
A+ + KAL G + G+ +RI FAK
Sbjct: 625 AVRARKALNGRDVLGSDVGAIRIGFAKV 652
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P+R LW+GNL + L F +G +ES+ P + F+NF + DAI + +
Sbjct: 449 PTRSLWIGNLDSSFSSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLN 508
Query: 90 ------GFPLAGNPLRIEFAKA 105
G P G +RI F KA
Sbjct: 509 RLGGDIGMP-NGQTVRIGFGKA 529
>gi|157108771|ref|XP_001650379.1| RNA and export factor binding protein [Aedes aegypti]
gi|157110681|ref|XP_001651200.1| RNA and export factor binding protein [Aedes aegypti]
gi|108868361|gb|EAT32586.1| AAEL015263-PA [Aedes aegypti]
gi|108879221|gb|EAT43446.1| AAEL005114-PA [Aedes aegypti]
Length = 261
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMK 86
S L V NL + E+++ + F FG L+S + RS A + F+ DAI +MK
Sbjct: 114 SSKLMVSNLDFGVSESDINELFADFGPLKSASVHYDRSGRSLGTADVVFERRADAIKAMK 173
Query: 87 ALQGFPLAGNPLRIEFAKA 105
G PL G P+ I+ A +
Sbjct: 174 QYNGVPLDGRPMSIQLATS 192
>gi|198434778|ref|XP_002132163.1| PREDICTED: similar to GH24608 isoform 1 [Ciona intestinalis]
Length = 216
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 22 GGGGRAN-----TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-SYAFINF 75
G GGRA+ PP+ L++ NL +E L F RF + V PGR AF+ F
Sbjct: 126 GAGGRADDDGSKNPPNHILFLNNLPPETQEEMLNMLFNRFNGFKEVRLVPGRHDIAFVEF 185
Query: 76 KIEEDAIASMKALQGFPLA-GNPLRIEFAK 104
+ E+ A + ALQGF ++ N +++ FAK
Sbjct: 186 EGEQQASEAKGALQGFKISPSNAMKVTFAK 215
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 31 PSRHLWVGNLSHNIEEA----NLTDQFLRFGE-LESVAFQP--GRSYAFINFKIEEDAIA 83
P+ ++ NL+ I++ +L F +FG+ L+ VA + R AF+ FK A
Sbjct: 5 PTHTIYANNLNEKIKKEELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATN 64
Query: 84 SMKALQGFPLAGNPLRIEFAK 104
+++++QGFP P+R+ ++K
Sbjct: 65 ALRSMQGFPFYDKPMRLAYSK 85
>gi|426402318|ref|YP_007021289.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425858986|gb|AFY00022.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 104
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMK 86
+ ++VGNLS N+++ L F FG +++V + GRS +AF+ E +A A+++
Sbjct: 3 KKIYVGNLSFNVDQDQLNQVFAEFGTVDTVNVITDRETGRSKGFAFVEMSTETEARAAIE 62
Query: 87 ALQGFPLAGNPLRIEFAK 104
L G LAG + I AK
Sbjct: 63 KLNGMDLAGRAMNISEAK 80
>gi|301104435|ref|XP_002901302.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
gi|262100777|gb|EEY58829.1| splicing factor, arginine/serine-rich, putative [Phytophthora
infestans T30-4]
Length = 214
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 46/74 (62%), Gaps = 3/74 (4%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKALQG 90
++VGNL ++ E L+D+F R+G + SV + P R +AF+ ++ E+DA +++++
Sbjct: 3 RVFVGNLPEDVRERELSDKFERYGRITSVRIKFPARPPPFAFLTYENEQDASDAVRSMNN 62
Query: 91 FPLAGNPLRIEFAK 104
G+ +R+E ++
Sbjct: 63 TTFGGSRIRVEMSR 76
>gi|168000741|ref|XP_001753074.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695773|gb|EDQ82115.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 279
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL ++ E + D F ++G + + + P R Y FI F+ DA +++
Sbjct: 6 SRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDARDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ GN LR+E A
Sbjct: 66 DGYNFDGNRLRVEIA 80
>gi|339255862|ref|XP_003370674.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316965776|gb|EFV50450.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 220
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQ----FLRFGE-LESVAFQP--GRSYAFINFKIEE 79
A+ PP++ ++V NL+ I++ L F +FG L+ V + R AFI FK
Sbjct: 2 ADIPPNQTIYVNNLNEKIKKDELKRALHAVFHQFGTILDIVCLKTLKMRGQAFIVFKDLN 61
Query: 80 DAIASMKALQGFPLAGNPLRIEFAKA 105
A +++++QGFP P+RI++AK+
Sbjct: 62 SATNALRSMQGFPFYDKPMRIQYAKS 87
>gi|308490885|ref|XP_003107634.1| CRE-RSP-3 protein [Caenorhabditis remanei]
gi|308250503|gb|EFO94455.1| CRE-RSP-3 protein [Caenorhabditis remanei]
Length = 262
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR--SYAFINFKIEEDAIASMKALQ 89
+ ++VGNL ++ E + D F ++G ++ + + GR ++AF+ F+ DA +++A
Sbjct: 8 DQKVYVGNLPGDVREKEVEDIFHKYGRIKYIDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 90 GFPLAGNPLRIEFA 103
G+ G +R+EF
Sbjct: 68 GYEFDGRRIRVEFT 81
>gi|255732850|ref|XP_002551348.1| predicted protein [Candida tropicalis MYA-3404]
gi|240131089|gb|EER30650.1| predicted protein [Candida tropicalis MYA-3404]
Length = 810
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + ++VG LS + E L F FG ++ V PG++ F+ + ++A ++ A+Q
Sbjct: 446 PNNTTVFVGGLSSEVNEPTLYTLFKPFGMIQQVKIPPGKNCGFVKYSTRDEAEEAIAAMQ 505
Query: 90 GFPLAGNPLRIEFAKA 105
GF + GN +R+ + +
Sbjct: 506 GFIIGGNRVRLSWGRV 521
>gi|395333318|gb|EJF65695.1| hypothetical protein DICSQDRAFT_77386 [Dichomitus squalens LYAD-421
SS1]
Length = 1299
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
SG + + P+R LW+G++ A + F +G +ES ++ FINF+ +D
Sbjct: 563 SGMDAQLQSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDD 622
Query: 81 AIASMKALQGFPLAGN---PLRIEFAKA 105
A+ + KAL G + G+ +RI FAK
Sbjct: 623 AVRARKALNGRDVLGSDVGAIRIGFAKV 650
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P+R LW+GNL + L F +G +ES+ P + F+NF + DAI + + +
Sbjct: 447 PTRSLWIGNLDSSFTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLN 506
Query: 90 ------GFPLAGNPLRIEFAKA 105
G P G +RI F KA
Sbjct: 507 RLGGDIGMP-NGQTVRIGFGKA 527
>gi|317142894|ref|XP_001819170.2| RNA binding protein Jsn1 [Aspergillus oryzae RIB40]
Length = 1411
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 2 GRGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
G G R G D + G P+R LW+G++ + +L F R+G++ES
Sbjct: 453 GSGAPNLGMRQGDLVDENNQDG-------PTRALWIGSIPVSTTITSLAAIFSRYGKIES 505
Query: 62 VAFQPGRSYAFINFKIEEDAIASMKALQG---FPLAGNPLRIEFAKA 105
++ F+NF+ E A+ + L G FP AG P+RI +AK
Sbjct: 506 TRVLTHKNCGFVNFERVESAVQAKSILNGTEIFPGAG-PVRIGYAKV 551
>gi|238501870|ref|XP_002382169.1| RNA binding protein Jsn1, putative [Aspergillus flavus NRRL3357]
gi|220692406|gb|EED48753.1| RNA binding protein Jsn1, putative [Aspergillus flavus NRRL3357]
Length = 1206
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 2 GRGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
G G R G D + G P+R LW+G++ + +L F R+G++ES
Sbjct: 453 GSGAPNLGMRQGDLVDENNQDG-------PTRALWIGSIPVSTTITSLAAIFSRYGKIES 505
Query: 62 VAFQPGRSYAFINFKIEEDAIASMKALQG---FPLAGNPLRIEFAKA 105
++ F+NF+ E A+ + L G FP AG P+RI +AK
Sbjct: 506 TRVLTHKNCGFVNFERVESAVQAKSILNGTEIFPGAG-PVRIGYAKV 551
>gi|170595296|ref|XP_001902324.1| Rnp [Brugia malayi]
gi|158590065|gb|EDP28832.1| Rnp, putative [Brugia malayi]
Length = 296
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF-------QPGRSYAFINFKIE 78
R TPP R L V NLS N+ + +L++ F +G L S GR Y ++ F+
Sbjct: 148 RKATPPPRRLCVRNLSRNVTKEHLSEIFSVYGALRSCELPMDRQHTHLGRGYGYVEFEQP 207
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
EDA ++K + G + G + E
Sbjct: 208 EDAEKALKHMDGGQIDGQEVTCELT 232
>gi|395863336|ref|XP_003803852.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
gi|395863340|ref|XP_003803854.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
Length = 514
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI EA L F FG LES+ + GRS Y FI F E A +++ L
Sbjct: 237 LYVGSLHLNITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQL 296
Query: 89 QGFPLAGNPLRI 100
G LAG P+++
Sbjct: 297 NGLELAGRPMKV 308
>gi|391863939|gb|EIT73238.1| RNA-binding protein [Aspergillus oryzae 3.042]
Length = 1185
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 2 GRGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
G G R G D + G P+R LW+G++ + +L F R+G++ES
Sbjct: 453 GSGAPNLGMRQGDLVDENNQDG-------PTRALWIGSIPVSTTITSLAAIFSRYGKIES 505
Query: 62 VAFQPGRSYAFINFKIEEDAIASMKALQG---FPLAGNPLRIEFAKA 105
++ F+NF+ E A+ + L G FP AG P+RI +AK
Sbjct: 506 TRVLTHKNCGFVNFERVESAVQAKSILNGTEIFPGAG-PVRIGYAKV 551
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELES-----VAFQPGR--SYAFINFKIEEDAI 82
P + ++V NLS++ +E +L F +FG + ++ GR A+I F+ E++A
Sbjct: 170 PKTDKVFVANLSYDTDEDSLKQAFEKFGTIVGEIGLPISRDTGRIRGIAYIQFETEDEAE 229
Query: 83 ASMKALQGFPLAGNPLRIEFA 103
A++K + G L G P+R +F+
Sbjct: 230 AAVKGMNGVYLDGRPIRTDFS 250
>gi|299472989|emb|CBN77390.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 313
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%), Gaps = 4/92 (4%)
Query: 16 EDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAF 72
ED H+ G + SR L++GNL +++E +L D F ++G++ + + P R ++ F
Sbjct: 38 EDLLHTRVKGTPDRTMSR-LYIGNLPMDMKEKDLEDIFYKYGKITDMQLKMPERPPAFGF 96
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
+ F+ DA +++A G+ G LR+E ++
Sbjct: 97 VTFEDSRDADEAVRARDGYDFDGYRLRVEMSR 128
>gi|83767028|dbj|BAE57168.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1206
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 2 GRGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
G G R G D + G P+R LW+G++ + +L F R+G++ES
Sbjct: 453 GSGAPNLGMRQGDLVDENNQDG-------PTRALWIGSIPVSTTITSLAAIFSRYGKIES 505
Query: 62 VAFQPGRSYAFINFKIEEDAIASMKALQG---FPLAGNPLRIEFAKA 105
++ F+NF+ E A+ + L G FP AG P+RI +AK
Sbjct: 506 TRVLTHKNCGFVNFERVESAVQAKSILNGTEIFPGAG-PVRIGYAKV 551
>gi|395863338|ref|XP_003803853.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
gi|395863342|ref|XP_003803855.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Otolemur
garnettii]
Length = 487
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI EA L F FG LES+ + GRS Y FI F E A +++ L
Sbjct: 210 LYVGSLHLNITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQL 269
Query: 89 QGFPLAGNPLRI 100
G LAG P+++
Sbjct: 270 NGLELAGRPMKV 281
>gi|312370926|gb|EFR19225.1| hypothetical protein AND_22865 [Anopheles darlingi]
Length = 759
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ +WVG L L +F RFG ++ + + G + A+I + + A
Sbjct: 322 GYGKAT--PTTRVWVGGLGAWTSVTQLEREFDRFGAIKKIEYTKGDTQAYILYDSIDAAT 379
Query: 83 ASMKALQGFPLAGNP---LRIEFA 103
A++K ++GFPL G P +RI+FA
Sbjct: 380 AAVKEMRGFPL-GAPDRRIRIDFA 402
>gi|255542756|ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223548402|gb|EEF49893.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 300
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEED 80
G R ++ SR L+VGNL +I + + D F ++G + V + P R YAF+ F+ D
Sbjct: 35 GKRMSSRASRTLYVGNLPGDIRQREVKDLFYKYGPIVEVDLKIPPRPPGYAFVEFEDARD 94
Query: 81 AIASMKALQGFPLAGNPLRIEFA 103
A +++ G+ G LR+E A
Sbjct: 95 AEDAIRGRDGYNFDGCRLRVELA 117
>gi|198434776|ref|XP_002132167.1| PREDICTED: similar to GH24608 isoform 2 [Ciona intestinalis]
Length = 220
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 7/90 (7%)
Query: 22 GGGGRAN-----TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-SYAFINF 75
G GGRA+ PP+ L++ NL +E L F RF + V PGR AF+ F
Sbjct: 130 GAGGRADDDGSKNPPNHILFLNNLPPETQEEMLNMLFNRFNGFKEVRLVPGRHDIAFVEF 189
Query: 76 KIEEDAIASMKALQGFPLA-GNPLRIEFAK 104
+ E+ A + ALQGF ++ N +++ FAK
Sbjct: 190 EGEQQASEAKGALQGFKISPSNAMKVTFAK 219
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 31 PSRHLWVGNLSHNIEEA----NLTDQFLRFGE-LESVAFQP--GRSYAFINFKIEEDAIA 83
P+ ++ NL+ I++ +L F +FG+ L+ VA + R AF+ FK A
Sbjct: 5 PTHTIYANNLNEKIKKEELKKSLYAIFSQFGQILDIVAMKTLKMRGQAFVIFKEISSATN 64
Query: 84 SMKALQGFPLAGNPLRIEFAK 104
+++++QGFP P+R+ ++K
Sbjct: 65 ALRSMQGFPFYDKPMRLAYSK 85
>gi|392577614|gb|EIW70743.1| hypothetical protein TREMEDRAFT_28739 [Tremella mesenterica DSM
1558]
Length = 165
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF-----QPGRS--YAFINFKIEEDAIA 83
P+R L V LS E++L D+F+R+G++E V Q RS + FI + EDA
Sbjct: 55 PNRVLGVFGLSVRTRESDLEDEFMRYGDVEKVVIVYDQRQSDRSRGFGFITMRTVEDAER 114
Query: 84 SMKALQGFPLAGNPLRIEFA 103
++ L G L G +R++F+
Sbjct: 115 CIEKLNGLMLHGRAIRVDFS 134
>gi|402593268|gb|EJW87195.1| hypothetical protein WUBG_01897 [Wuchereria bancrofti]
Length = 296
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF-------QPGRSYAFINFKIE 78
R TPP R L V NLS N+ + +L++ F +G L S GR Y ++ F+
Sbjct: 148 RKATPPPRRLCVRNLSRNVTKEHLSEIFSVYGALRSCELPMDRQHTHLGRGYGYVEFEQP 207
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
EDA ++K + G + G + E
Sbjct: 208 EDAEKALKHMDGGQIDGQEVTCELT 232
>gi|327288080|ref|XP_003228756.1| PREDICTED: RNA-binding protein 7-like [Anolis carolinensis]
Length = 261
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-----SYAFINFKIEE 79
G A R L+VGNL + E L + FL+ G + +V R S+AF+NFK EE
Sbjct: 2 GAAAAEADRTLFVGNLDPGVTEELLFELFLQGGPVLNVKIPKDREGKAKSFAFVNFKHEE 61
Query: 80 DAIASMKALQGFPLAGNPLRIEF 102
M L G L G PL+I+F
Sbjct: 62 SVPYGMSLLNGIKLFGRPLKIQF 84
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV------AFQPGRSYAFINFK 76
G A P+ L+VG+L HN+ E L D F + ++ S+ A + YA++NF
Sbjct: 23 GTAEAGQFPNSSLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFS 82
Query: 77 IEEDAIASMKALQGFPLAGNPLRI 100
+DA +M+ L PL G +RI
Sbjct: 83 NPQDASNAMELLNFTPLNGKAIRI 106
>gi|344232977|gb|EGV64850.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 617
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKA 87
N P + ++VG LS + E L F FG ++ + PG++ F+ + E+A ++ +
Sbjct: 389 NDPTNTTVFVGGLSSEVSEQTLFALFQPFGVVQQIKIPPGKNCGFVKYSTREEAEDAIAS 448
Query: 88 LQGFPLAGNPLRIEFAK 104
+QG+ + GN +R+ + +
Sbjct: 449 MQGYIIGGNRVRLSWGR 465
>gi|224068334|ref|XP_002302710.1| predicted protein [Populus trichocarpa]
gi|222844436|gb|EEE81983.1| predicted protein [Populus trichocarpa]
Length = 252
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR L+VGNL +I E + D F ++G + + + P R YAF+ F+ DA +++
Sbjct: 6 SRTLYVGNLPGDIREKEVEDLFYKYGPVAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ LR+E A
Sbjct: 66 DGYDFDGHRLRVELA 80
>gi|378726298|gb|EHY52757.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 481
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
+VGNL+ +A+L F FG + FQ R +AFI E+A ++ L G+ +
Sbjct: 303 CYVGNLTPYTTQADLVPLFQNFGYVVETRFQSDRGFAFIKMDTHENAAMAICQLSGYNVN 362
Query: 95 GNPLRIEFAK 104
G PL+ + K
Sbjct: 363 GRPLKCSWGK 372
>gi|358393829|gb|EHK43230.1| hypothetical protein TRIATDRAFT_146202 [Trichoderma atroviride IMI
206040]
Length = 297
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Query: 3 RGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV 62
RGG ER G +F +R L V N+S EE+ L D F RFG + V
Sbjct: 198 RGGAGERMGGSKFGERDDFAT-----------LRVTNVSEMAEESELRDMFERFGRVTRV 246
Query: 63 AFQPGRS------YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
R +AFI+F DA+ + + GF LR+EFAK
Sbjct: 247 FLAKDRETGMAKGFAFISFADHSDAVTACNKMDGFGFKHLILRVEFAK 294
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
+A+T P R L+VG+L NI E L F FG+++++ + GRS Y FI + +
Sbjct: 352 KAHTGPMR-LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNAD 410
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA +++ L GF LAG P+++
Sbjct: 411 DAKKALEQLNGFELAGRPMKV 431
>gi|393245402|gb|EJD52912.1| hypothetical protein AURDEDRAFT_110760 [Auricularia delicata
TFB-10046 SS5]
Length = 1219
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS------ 84
PSR LW+GNL ++ L F +G +ES+ P + F+NF + DAI +
Sbjct: 323 PSRSLWIGNLDSSMTSEALIHVFAPYGAIESLRLLPEKECGFVNFVDQNDAIRAKDDVLN 382
Query: 85 -MKALQGFPLAGNPLRIEFAKA 105
+ L G P G +RI F KA
Sbjct: 383 RLGGLIGMP-NGQAVRIGFGKA 403
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
+GG + P+R LW+G++ A + F FG +ES ++ F+NF+ +D
Sbjct: 442 AGGDSSLQSSPTRALWIGSIPSTTTPATILSVFSPFGPIESARVLTHKNCGFVNFERLDD 501
Query: 81 AIASMKALQGFPLAGN---PLRIEFAKA 105
A+ + KAL G + G+ +RI FA+
Sbjct: 502 AVRARKALNGRDVLGSDVGAIRIGFARV 529
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ-----PGRS--YAFINFKIEEDAIASMKA 87
L+VGN+ ++ E +L + F FGELE V Q PGRS Y F+ F A ++
Sbjct: 277 LYVGNIHFSVTEKDLQEIFEPFGELEQVILQRDEMNPGRSKGYGFVQFVDPSHAKNALAE 336
Query: 88 LQGFPLAGNPLRI 100
+ GF LAG +R+
Sbjct: 337 MNGFELAGRQIRV 349
>gi|410340767|gb|JAA39330.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340769|gb|JAA39331.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340771|gb|JAA39332.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340773|gb|JAA39333.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340775|gb|JAA39334.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
gi|410340777|gb|JAA39335.1| RNA binding motif (RNP1, RRM) protein 3 [Pan troglodytes]
Length = 157
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKAL 88
L+VG L+ N +E L D F FG + V Q R + FI F I E A +M+A+
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFPIPEHASVAMRAM 67
Query: 89 QGFPLAGNPLRIEFA 103
G L G +R++ A
Sbjct: 68 NGESLDGRQIRVDHA 82
>gi|242015973|ref|XP_002428613.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
gi|212513276|gb|EEB15875.1| RNA-binding region-containing protein, putative [Pediculus humanus
corporis]
Length = 593
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI E L F FG+++S+ + GRS Y FI F +DA +++ L
Sbjct: 267 LYVGSLHFNITEDMLRGIFEPFGKIDSIQLIMDPETGRSKGYGFITFHSADDAKKALEQL 326
Query: 89 QGFPLAGNPLRI 100
GF LAG P+++
Sbjct: 327 NGFELAGRPMKV 338
>gi|443926790|gb|ELU45354.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 886
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 1 SGRGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELE 60
+ RGGG G R E G + P + ++VG LS I E L F FGE+
Sbjct: 474 ASRGGGLSE--GARLESARALLGVLNSADPYNTTVFVGGLSGLIAEETLRGFFAPFGEIH 531
Query: 61 SVAFQPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
V PG+ F+ F + DA +++ +QG+P+ G +R+ + +
Sbjct: 532 YVKIPPGKGCGFVQFVRKADAERAIERMQGYPIGGGKIRLSWGRT 576
>gi|395844748|ref|XP_003795115.1| PREDICTED: nucleolar protein 8 [Otolemur garnettii]
Length = 580
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI 77
+AN P R L+VG LS + E +L +QF RFGE+ V P + +A+IN K+
Sbjct: 2 KANREPKR-LFVGGLSETVSETDLQNQFSRFGEVSDVEIITRKDDQGNPQKIFAYINIKV 60
Query: 78 -EEDAIASMKALQGFPLAGNPLRIEFAK 104
E D M L G L+I+ AK
Sbjct: 61 AEADLKKCMSVLNKTKWKGGTLQIQLAK 88
>gi|336377458|gb|EGO18620.1| hypothetical protein SERLADRAFT_418814 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1383
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 21 SGGGGRANTP------------PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR 68
SG G++ +P P+R LW+G++ A + F +G +ES +
Sbjct: 682 SGATGKSTSPGLGGMDAQLQSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHK 741
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGN---PLRIEFAKA 105
+ FINF+ +DA+ + KAL G + G+ +RI FAK
Sbjct: 742 NCGFINFERLDDAVRARKALNGRDVLGSDVGAIRIGFAKV 781
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P+R LW+GNL + L F +G +ES+ P + F+NF + DAI + +
Sbjct: 580 PTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQGDAIRAKDDVLN 639
Query: 90 ------GFPLAGNPLRIEFAKA 105
G P G +RI F KA
Sbjct: 640 RLGGNIGMP-NGQTVRIGFGKA 660
>gi|353238006|emb|CCA69965.1| related to splicing factor HCC1 [Piriformospora indica DSM 11827]
Length = 543
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 17 DRTHSGGGGRANTPP--------SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ--- 65
+R HSG N PP L+VG+L + E + F FGELE V
Sbjct: 283 NRIHSGD--LLNLPPGVTATSHGPMQLYVGSLHFQLTEEEIKQVFEPFGELEFVDLHRDP 340
Query: 66 -PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI ++ EDA +++ + GF LAG LR+
Sbjct: 341 ATGRSKGYCFIQYRRPEDAKMALEQMDGFELAGRQLRV 378
>gi|443695245|gb|ELT96187.1| hypothetical protein CAPTEDRAFT_148377 [Capitella teleta]
Length = 277
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI E L F FG+++ + + GRS Y FI F EDA +++ L
Sbjct: 3 LYVGSLHFNITEEMLRGIFDPFGKIDDIKLMKNHETGRSQGYGFITFHTAEDAKKALEQL 62
Query: 89 QGFPLAGNPLRI 100
GF LAG P+++
Sbjct: 63 NGFELAGRPMKV 74
>gi|367043706|ref|XP_003652233.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
gi|346999495|gb|AEO65897.1| hypothetical protein THITE_2113488 [Thielavia terrestris NRRL 8126]
Length = 533
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAI 82
+P S L+VGNLS + E +++ F + +++S+ + GR +A++ F +DA
Sbjct: 389 SPESDTLFVGNLSFSANEESVSAFFNKVAKVQSLRIPTDQESGRPKGFAYVTFSSVDDAK 448
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
A+ +AL G L G P+R++FAK
Sbjct: 449 AAFEALNGSDLDGRPVRLDFAK 470
>gi|255719794|ref|XP_002556177.1| KLTH0H06842p [Lachancea thermotolerans]
gi|238942143|emb|CAR30315.1| KLTH0H06842p [Lachancea thermotolerans CBS 6340]
Length = 547
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 42/76 (55%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + +++G L+ + E L F FG + +V PG+ F+ + DA A+++ +Q
Sbjct: 403 PNNTTVFIGGLTSHTSERQLHSLFAPFGTIINVKIPPGKGCGFVKYAYRIDAEAAIQGMQ 462
Query: 90 GFPLAGNPLRIEFAKA 105
GF + GNP+R+ + +
Sbjct: 463 GFIVGGNPIRLSWGRT 478
>gi|409046171|gb|EKM55651.1| hypothetical protein PHACADRAFT_256428 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1287
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
+G + + P+R LW+G++ A + F FG +ES ++ FINF+ +D
Sbjct: 558 AGMDAQLQSTPTRALWIGSIPSTTTPATILSVFSPFGPIESARVLTHKNCGFINFERLDD 617
Query: 81 AIASMKALQGFPLAGN---PLRIEFAKA 105
A+ + KAL G + G+ +RI FAK
Sbjct: 618 AVRARKALNGRDVLGSDVGAIRIGFAKV 645
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P+R LW+GNL ++ L F +G +ES+ P + F+NF + DAI + +
Sbjct: 443 PTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLN 502
Query: 90 ------GFPLAGNPLRIEFAKA 105
G P G +RI F KA
Sbjct: 503 RLGGDIGMP-NGQTVRIGFGKA 523
>gi|325181594|emb|CCA16044.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325191994|emb|CCA26461.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 236
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIAS 84
P +L+V NL+H + + L F +FG LE + R +AF+ F+ DA +
Sbjct: 72 PGNNLYVANLAHRVTDEELRQLFEKFGRLEKCEIIIDPISRESRGFAFVTFEDVRDASDA 131
Query: 85 MKALQGFPLAGNPLRIEFAK 104
++ L G + G +R+E AK
Sbjct: 132 VQELNGKDIQGRRMRVEHAK 151
>gi|452838817|gb|EME40757.1| hypothetical protein DOTSEDRAFT_27368 [Dothistroma septosporum
NZE10]
Length = 234
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 27 ANTPPSRHLWVGNLSHNIE----EANLTDQFLRFGELESVAFQP---GRSYAFINFKIEE 79
A PP+ +++ NL ++ EA L D F FG++ V + R AFI F E
Sbjct: 2 AENPPNATIYIKNLDEKVKIPALEAALRDTFEEFGDIIDVVAKKNLRARGQAFIVFSSPE 61
Query: 80 DAIASMKALQGFPLAGNPLRIEFAK 104
+A ++++LQGF + P+ I++AK
Sbjct: 62 EAELALESLQGFEIFERPMDIQYAK 86
>gi|336364881|gb|EGN93234.1| hypothetical protein SERLA73DRAFT_163561 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1420
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 15/100 (15%)
Query: 21 SGGGGRANTP------------PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR 68
SG G++ +P P+R LW+G++ A + F +G +ES +
Sbjct: 682 SGATGKSTSPGLGGMDAQLQSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHK 741
Query: 69 SYAFINFKIEEDAIASMKALQGFPLAGN---PLRIEFAKA 105
+ FINF+ +DA+ + KAL G + G+ +RI FAK
Sbjct: 742 NCGFINFERLDDAVRARKALNGRDVLGSDVGAIRIGFAKV 781
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P+R LW+GNL + L F +G +ES+ P + F+NF + DAI + +
Sbjct: 580 PTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQGDAIRAKDDVLN 639
Query: 90 ------GFPLAGNPLRIEFAKA 105
G P G +RI F KA
Sbjct: 640 RLGGNIGMP-NGQTVRIGFGKA 660
>gi|331230321|ref|XP_003327825.1| hypothetical protein PGTG_08592 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306815|gb|EFP83406.1| hypothetical protein PGTG_08592 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1333
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LWVG++ +L D F +G +ESV ++ FINF+ +DA+ + KAL G
Sbjct: 639 PTRALWVGSIPSQTTPNHLMDIFSPYGAIESVRVLSHKNCGFINFEHLDDAVRARKALSG 698
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ ++I +AK
Sbjct: 699 REILGSEVGAVKIGYAKV 716
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
PSR LW+GN + L + F +G +ES+ P + FINF DA+
Sbjct: 476 PSRSLWIGNFDPSTTAQELMNVFAVYGPIESLRLLPDKECGFINFVSVHDAV 527
>gi|118137707|pdb|2F3J|A Chain A, The Solution Structure Of The Ref2-I Mrna Export Factor
(Residues 1-155)
Length = 177
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 17 DRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YA 71
D SG GG L V NL + +A++ + F FG L+ A RS A
Sbjct: 73 DLFDSGCGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTA 132
Query: 72 FINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
++F+ DA+ +MK +G PL G P+ I+
Sbjct: 133 DVHFERRADALKAMKQYKGVPLDGRPMDIQLV 164
>gi|384493834|gb|EIE84325.1| hypothetical protein RO3G_09035 [Rhizopus delemar RA 99-880]
Length = 271
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S +++G+L ++ L D F RFG LE V G+ YAF ++ +E A+A++K++ G
Sbjct: 144 SNKIYIGDLE-DVTIEQLEDVFSRFGTLEDVRMVEGKDYAFATYEKKEAALAAIKSMHGV 202
Query: 92 PLAGNPLRIEFAK 104
L +++ AK
Sbjct: 203 LLGTRQIKVNRAK 215
>gi|357516357|ref|XP_003628467.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
gi|355522489|gb|AET02943.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
Length = 347
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D F+++G + + + P R YAF+ F+ +DA +++
Sbjct: 32 SRTVYVGNLPGDIREREVEDLFMKYGHITHIDLKVPPRPPGYAFVEFEDVQDAEDAIRGR 91
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ LR+E A
Sbjct: 92 DGYDFDGHRLRVEAA 106
>gi|291245052|ref|XP_002742405.1| PREDICTED: MGC81970 protein-like isoform 2 [Saccoglossus
kowalevskii]
Length = 444
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
+ N+ P R L+VG+L NI E L F FG+++++ + GRS Y FI F E
Sbjct: 138 KGNSGPMR-LYVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAE 196
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA +++ L GF LAG P+++
Sbjct: 197 DAKKALEQLNGFELAGRPMKV 217
>gi|256051723|ref|XP_002569569.1| RNA and export factor binding protein [Schistosoma mansoni]
Length = 251
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRSY--AFINFKIEEDAIASMKALQ 89
L+V NL + +A++ + F FG L++ A GRS A ++F + DA+ +MK
Sbjct: 103 LFVSNLDCGVSDADIQELFSEFGTLKTAAVHYDCSGRSLGTAHVHFLQKADALKAMKQYD 162
Query: 90 GFPLAGNPLRIEFAKA 105
G PL G P+ I+ +
Sbjct: 163 GVPLDGRPMNIQLVSS 178
>gi|442761059|gb|JAA72688.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Ixodes ricinus]
Length = 235
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
R N P R L+VG+L NI E L F FG+++ + + RS Y FI F E
Sbjct: 139 RGNIGPMR-LYVGSLHFNITEDMLKGIFEPFGKIDKIELIKDMETNRSKGYGFITFHDSE 197
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA +++ L GF LAG P+++
Sbjct: 198 DAKKALEQLNGFELAGRPMKV 218
>gi|440801545|gb|ELR22563.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 520
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESV-AFQPGRSYAFINFKIEEDAIASMKALQG 90
SR L+V N+S+N E L D F ++GE++ V R AFI + DA + + LQG
Sbjct: 121 SRTLFVRNVSYNTSERTLMDLFKKYGEIKRVFNLIDKRGMAFITYYDIRDAQEAKRDLQG 180
Query: 91 FPLAGNPLRIEFA 103
+ G PL I ++
Sbjct: 181 YDFEGRPLDIHYS 193
>gi|406603569|emb|CCH44882.1| Negative growth regulatory protein NGR1 [Wickerhamomyces ciferrii]
Length = 641
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + +++G L+ I E L F FG + V PG+ FI F EDA A++ +Q
Sbjct: 384 PTNTTVFIGGLAPGIPEQTLAALFQPFGNITHVKIPPGKGCGFIRFDKREDAEAAIAGMQ 443
Query: 90 GFPLAGNPLRIEFAKA 105
GF + G+ +R+ + +A
Sbjct: 444 GFQIGGSRVRLSWGRA 459
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQF-LRFGELESVAFQP------GRSYAFINFKIEEDAIA 83
P L+VG+LS + EA+L F F +++V R + F+ F EE+
Sbjct: 174 PEFSLFVGDLSPSTTEAHLLALFQTHFKSVKTVRVMTDPITGTSRCFGFVRFSDEEERRR 233
Query: 84 SMKALQGFPLAGNPLRIEFA 103
++ +QG AG PLR+ A
Sbjct: 234 ALTEMQGVWCAGRPLRVALA 253
>gi|390598149|gb|EIN07547.1| hypothetical protein PUNSTDRAFT_69821 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1273
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
SG + + P+R LW+G++ A + F +G +ES ++ FINF+ +D
Sbjct: 532 SGMDAQLQSTPTRALWIGSIPSTTTPAAILSVFSPYGPIESARVLTHKNCGFINFERLDD 591
Query: 81 AIASMKALQGFPLAGN---PLRIEFAKA 105
A+ + KAL G + G+ +RI FAK
Sbjct: 592 AVRARKALNGRDILGSDVGAIRIGFAKV 619
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 13 GRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAF 72
GR G + TP +R LW+GNL ++ L F +G +ES+ P + F
Sbjct: 400 GRAVSPKSEGSSSQTQTP-TRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGF 458
Query: 73 INFKIEEDAIASMKALQ-------GFPLAGNPLRIEFAKA 105
+NF DAI + + G P G +RI F KA
Sbjct: 459 VNFVDMADAIRAKDEVLNRLGGNIGMP-NGQTVRIGFGKA 497
>gi|300123677|emb|CBK24949.2| unnamed protein product [Blastocystis hominis]
Length = 325
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGRSYAFINFKIEEDAIASMKAL 88
S+ L+VGNL + +E +L+ F +FGE+ +A + G YAF+ F EE+A + +L
Sbjct: 2 SKRLYVGNLEYGVENDDLSKLFGQFGEITDIAIKDRGQGAVYAFVEFSKEEEADNAQSSL 61
Query: 89 QGFPLAGNPLRIEFAKA 105
G +R+E+ +
Sbjct: 62 NSTHFMGRDIRVEYTRG 78
>gi|353241455|emb|CCA73269.1| related to JSN1-RNA-binding protein (pumilio family)
[Piriformospora indica DSM 11827]
Length = 1295
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINF-------KIEEDAIA 83
PSR LW+GNL + L F +G +ES+ P + F+NF + ++D +
Sbjct: 454 PSRSLWIGNLDTTATKETLLTVFSPYGAIESLRLLPEKECGFVNFLDINDAVRAKDDVLN 513
Query: 84 SMKALQGFPLAGNPLRIEFAKA 105
+ G P G P+RI F KA
Sbjct: 514 RLGGNIGLP-NGQPVRIGFGKA 534
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIA 83
G + P+R LW+G++ A + F FG +ES ++ F+NF+ +DA+
Sbjct: 564 GMEVQSTPTRALWIGSIPSTTTPATILSIFAPFGPIESARVLTHKNCGFVNFERLDDAVR 623
Query: 84 SMKALQGFPLAGN---PLRIEFAKA 105
+ KAL G + G+ +RI +A+
Sbjct: 624 ARKALNGRDVLGSDVGAIRIGYARV 648
>gi|428165567|gb|EKX34559.1| hypothetical protein GUITHDRAFT_119306 [Guillardia theta CCMP2712]
Length = 259
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ-----PGRSYAFINFKIEEDAIASMKALQ 89
L+V NLS L+D F +FG+L+SV+ Q R + F+NF+ E A +M+ LQ
Sbjct: 32 LYVANLSFRCNTPELSDVFSKFGKLQSVSVQRWPHGESRGFGFVNFEDPEAADTAMRELQ 91
Query: 90 GFPLAGNPLRIEFAK 104
+A + I+ ++
Sbjct: 92 DVVVADRAITIQKSR 106
>gi|432944515|ref|XP_004083418.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like, partial
[Oryzias latipes]
Length = 469
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL++++ E L F FG+LE V + + YAFI+F+ E A+ ++ + G L
Sbjct: 347 LFVRNLANSVTEEILEKSFSAFGKLERV--KKLKDYAFIHFEEREGAVKALDEMNGKELE 404
Query: 95 GNPLRIEFAK 104
G P+ I FAK
Sbjct: 405 GEPIEIVFAK 414
>gi|302792100|ref|XP_002977816.1| ATP-binding cassette transporter, subfamily C, member 19, SmABCC19
[Selaginella moellendorffii]
gi|300154519|gb|EFJ21154.1| ATP-binding cassette transporter, subfamily C, member 19, SmABCC19
[Selaginella moellendorffii]
Length = 1494
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 45/97 (46%), Gaps = 10/97 (10%)
Query: 17 DRTHSGGGGRANTPPSR----HLWVGNLSHNIEEANLTDQFLRFGELESVAFQP------ 66
+R GG G T R L V NLS + EA+L + F RFG + +
Sbjct: 1383 NRRPGGGAGSKETMRYRDDGNSLRVTNLSEDTREADLQELFGRFGSISRIFVASDRETGL 1442
Query: 67 GRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
GR +AFI F EDA +MK L G+ L +E+A
Sbjct: 1443 GRGFAFITFVRREDAERAMKKLDGYGYDSLILHVEWA 1479
>gi|68534069|gb|AAH99405.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINF 75
SG GG L V NL + +A++ + F FG L+ A RS A ++F
Sbjct: 63 SGCGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHF 122
Query: 76 KIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+ DA+ +MK +G PL G P+ I+ +
Sbjct: 123 ERRADALKAMKQYKGVPLDGRPMDIQLVTS 152
>gi|159164094|pdb|2DGU|A Chain A, Solution Structure Of The Rna Binding Domain In
Heterogeneous Nuclear Ribonucleoprotein Q
Length = 103
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 22 GGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA 81
G G + + L+V NL++ + E L F +FG+LE V + + YAFI+F + A
Sbjct: 1 GSSGSSGMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERV--KKLKDYAFIHFDERDGA 58
Query: 82 IASMKALQGFPLAGNPLRIEFAK 104
+ +M+ + G L G + I FAK
Sbjct: 59 VKAMEEMNGKDLEGENIEIVFAK 81
>gi|148238335|ref|NP_062357.3| RNA and export factor-binding protein 2 [Mus musculus]
gi|148707130|gb|EDL39077.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINF 75
SG GG L V NL + +A++ + F FG L+ A RS A ++F
Sbjct: 63 SGCGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHF 122
Query: 76 KIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+ DA+ +MK +G PL G P+ I+ +
Sbjct: 123 ERRADALKAMKQYKGVPLDGRPMDIQLVTS 152
>gi|255633638|gb|ACU17178.1| unknown [Glycine max]
Length = 196
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDA 81
++ PS L++G +S++ +E +L + F ++GE+ + GRS + FI + E+A
Sbjct: 37 SSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITYTSVEEA 96
Query: 82 IASMKALQGFPLAGNPLRIEFA 103
++++AL G L G P+R+ +A
Sbjct: 97 SSAIQALDGQDLHGRPIRVNYA 118
>gi|194386874|dbj|BAG59803.1| unnamed protein product [Homo sapiens]
Length = 933
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS +I EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|119583219|gb|EAW62815.1| nucleolar protein 8, isoform CRA_b [Homo sapiens]
Length = 1138
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS +I EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|427784529|gb|JAA57716.1| Putative heteroproteinous nuclear ribonucleoprotein r rrm
superfamily [Rhipicephalus pulchellus]
Length = 608
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ ++ E L + F G +E V + + YAF++F+ + A+ +M+ LQG L
Sbjct: 338 LYVRNLTTDVTEEKLKELFEAHGRVERV--KKIKDYAFVHFEERDHAVRAMEQLQGKDLC 395
Query: 95 GNPLRIEFAK 104
G P+ + AK
Sbjct: 396 GAPMEVSLAK 405
>gi|255711606|ref|XP_002552086.1| KLTH0B06886p [Lachancea thermotolerans]
gi|238933464|emb|CAR21648.1| KLTH0B06886p [Lachancea thermotolerans CBS 6340]
Length = 396
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS + + L F GE+ + FQ + +AF++FK EE
Sbjct: 229 SKNPPSRILFVGNLSFDTTDELLKKHFQHCGEIVKIRMATFQDTGKCKGFAFVDFKNEEG 288
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
++K +AG PLR+EF +
Sbjct: 289 PTNALKDKTCRRIAGRPLRMEFGE 312
>gi|42522915|ref|NP_968295.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|426403373|ref|YP_007022344.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|39574111|emb|CAE79288.1| putative RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|425860041|gb|AFY01077.1| putative RNA-binding protein [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 116
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELES----VAFQPGRS--YAFINFKIEEDAIASMK 86
+ ++VGNLS+++++ +L D F FG +ES + + GRS +AF+ +++A ++
Sbjct: 3 KKIYVGNLSYSLDDQSLADTFAEFGNVESARIVIDRETGRSKGFAFVEMSTDDEAATAIA 62
Query: 87 ALQGFPLAGNPLRIEFAK 104
L G L G + + AK
Sbjct: 63 KLNGVELMGRAMNVSEAK 80
>gi|294950021|ref|XP_002786421.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
gi|239900713|gb|EER18217.1| Serine-arginine protein, putative [Perkinsus marinus ATCC 50983]
Length = 317
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 9/75 (12%)
Query: 37 VGNLSHNIEEANLTDQFLRFGELESVAFQPGR---------SYAFINFKIEEDAIASMKA 87
V N+ N+ E L D F +FG +ES+ + R +YA++ F+ +DA + K+
Sbjct: 6 VSNIPSNLRERELDDIFYKFGRIESIEIRGARINESSRRRTAYAYVQFRDWQDAADAAKS 65
Query: 88 LQGFPLAGNPLRIEF 102
G+ + G P+ +E
Sbjct: 66 RNGYEIDGQPITVEV 80
>gi|26339222|dbj|BAC33282.1| unnamed protein product [Mus musculus]
Length = 218
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINF 75
SG GG L V NL + +A++ + F FG L+ A RS A ++F
Sbjct: 63 SGCGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHF 122
Query: 76 KIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+ DA+ +MK +G PL G P+ I+ +
Sbjct: 123 ERRADALKAMKQYKGVPLDGRPMDIQLVTS 152
>gi|307103808|gb|EFN52065.1| hypothetical protein CHLNCDRAFT_36976 [Chlorella variabilis]
Length = 302
Score = 48.1 bits (113), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKALQGF 91
++VGNL +I E + D F ++G++ S+ + P R ++AF+ F DA +++ G+
Sbjct: 12 VYVGNLPDDIREREVEDLFSKYGKVVSIDMKAPVRPPAFAFVEFADPRDAEDAVRGRDGY 71
Query: 92 PLAGNPLRIEFAK 104
GN LR+E AK
Sbjct: 72 DFYGNRLRVELAK 84
>gi|55726293|emb|CAH89918.1| hypothetical protein [Pongo abelii]
Length = 900
Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS +I EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYININVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|37681889|gb|AAQ97822.1| NS1-associated protein 1 [Danio rerio]
Length = 558
Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ + E L F +FG+LE V + + YAFI+F+ + A+ ++ L G L
Sbjct: 341 LFVRNLASTVTEELLEKTFCQFGKLERV--KKLKDYAFIHFEERDGAVKALAELHGKDLE 398
Query: 95 GNPLRIEFAK 104
G P+ I FAK
Sbjct: 399 GEPIEIVFAK 408
>gi|225437350|ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
vinifera]
gi|359480272|ref|XP_003632425.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
vinifera]
Length = 296
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR L+VGNL +I E + D F ++G + + + P R YAF+ F+ DA +++
Sbjct: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ LR+E A
Sbjct: 66 DGYDFDGHRLRVELA 80
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV----AFQPGRS--YAFINFK 76
GG N S ++VG+L HN+ EA L + F + G + S+ RS YA++N+
Sbjct: 14 GGPAPNQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYH 73
Query: 77 IEEDAIASMKALQGFPLAGNPLRIEFA 103
+DA +++ L P+ G P+RI F+
Sbjct: 74 SAQDATRALELLNFTPVNGKPIRIMFS 100
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 14 RFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-----PGR 68
R ++R SGG + N +++V NL N + L F +G + S +
Sbjct: 189 RRQERDLSGGVSKFN-----NVYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNEGKSK 243
Query: 69 SYAFINFKIEEDAIASMKALQG 90
+ F+NF++ +DA +++AL G
Sbjct: 244 CFGFVNFELADDAAKAVEALNG 265
>gi|121714030|ref|XP_001274626.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
gi|119402779|gb|EAW13200.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
Length = 377
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESV-------AFQPGRSYAFINFKIEEDAIA 83
P R L+V LS++++EA+L +F RFG +E V + +P R YAFI ++ E+D A
Sbjct: 100 PFRTLFVARLSYDVKEADLEREFGRFGPIERVHTVTPKGSKKPHRGYAFIVYEREKDMKA 159
Query: 84 SMKALQGF 91
+ K G
Sbjct: 160 AYKETDGI 167
>gi|308499132|ref|XP_003111752.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
gi|308239661|gb|EFO83613.1| hypothetical protein CRE_02981 [Caenorhabditis remanei]
Length = 317
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQP----GRSYAFINFKIEEDAIASMKALQG 90
++VGNL ++ E + D F ++G++ +V + S+AF+ F DA ++++ G
Sbjct: 9 IYVGNLPPDVREKEVEDLFHKYGDIRNVEVKTRHGETHSFAFVQFDSHRDAKEAVRSRDG 68
Query: 91 FPLAGNPLRIEF 102
+ G LR+EF
Sbjct: 69 YDFDGKRLRVEF 80
>gi|197260810|gb|ACH56905.1| heterogeneous nuclear ribonucleoprotein r [Simulium vittatum]
Length = 252
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+H+I E L + F +G +E V + + YAF++++ ++ + +M+ L G +
Sbjct: 57 LYVRNLTHDISEEKLKEHFENYGRVERV--KKIKDYAFVHYEDRDNTVLAMRDLDGKDIG 114
Query: 95 GNPLRIEFAK 104
G+ + + AK
Sbjct: 115 GSCIEVSLAK 124
>gi|158429066|pdb|2JRS|A Chain A, Solution Nmr Structure Of Caper Rrm2 Domain. Northeast
Structural Genomics Target Hr4730a
Length = 108
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI E L F FG +ES+ + GRS Y FI F E A +++ L
Sbjct: 29 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 88
Query: 89 QGFPLAGNPLRI 100
GF LAG P+++
Sbjct: 89 NGFELAGRPMKV 100
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 2 GRGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
GR G R+ G E S GG +L V L NI E +L F+ G +ES
Sbjct: 35 GRAGSNARYWGSMSEGGGLSAAGGDT---ARTNLIVNYLPQNITEKDLYAMFVTIGPIES 91
Query: 62 V----AFQPGRSYAF--INFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
F+ G SY F +NF EEDA ++ G+ L L++ +A+
Sbjct: 92 CRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYAR 140
>gi|224120944|ref|XP_002318458.1| predicted protein [Populus trichocarpa]
gi|222859131|gb|EEE96678.1| predicted protein [Populus trichocarpa]
Length = 280
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E+ + D F ++G + V + P R Y F+ F+ DA +++
Sbjct: 6 SRTIYVGNLPADIRESKVEDLFYKYGRILDVELKIPPRPPCYCFVEFENARDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ LR+E A
Sbjct: 66 DGYNFDGSRLRVELA 80
>gi|189208127|ref|XP_001940397.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976490|gb|EDU43116.1| nucleolysin TIA-1 isoform p40 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 470
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
+VGNL+ +++L F FG + FQ R +AFI E+A ++ L G+ +
Sbjct: 293 CYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVN 352
Query: 95 GNPLRIEFAK 104
G PL+ + K
Sbjct: 353 GRPLKCSWGK 362
>gi|428182866|gb|EKX51725.1| hypothetical protein GUITHDRAFT_150786 [Guillardia theta CCMP2712]
Length = 291
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 10/86 (11%)
Query: 25 GRANTPPSRHLWVGNLSHN-IEEANLTDQFLRFGEL--------ESVAFQPGRSYAFINF 75
G+ PP LWVGN+ ++E + F +FGEL SV P S AF+NF
Sbjct: 110 GQRERPPFFGLWVGNVHATLVQEEEFRNAFEKFGELCNPQIHGVPSVNILPESSSAFVNF 169
Query: 76 KIEEDAIASMKALQGFPLAG-NPLRI 100
EDA A+ K LQG + G PLRI
Sbjct: 170 SRYEDASAAKKGLQGKLVGGAGPLRI 195
>gi|300085579|gb|ADJ67482.1| RNA and export factor binding protein 2 [Mus musculus]
Length = 218
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINF 75
SG GG L V NL + +A++ + F FG L+ A RS A ++F
Sbjct: 63 SGCGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHF 122
Query: 76 KIEEDAIASMKALQGFPLAGNPLRIEFA 103
+ DA+ +MK +G PL G P+ I+
Sbjct: 123 ERRADALKAMKQYKGVPLDGRPMDIQLV 150
>gi|422294869|gb|EKU22169.1| U2 small nuclear ribonucleoprotein B'', partial [Nannochloropsis
gaditana CCMP526]
Length = 289
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTD----QFLRFGELESVAFQPGRSY---AFINFKIEED 80
+ PP++ L+V NL+ + + +L F +G + + G S A++ F
Sbjct: 66 DIPPNQTLYVQNLNEKLNKVSLKKLLYLAFSAYGRVIDIVACRGESLRGQAWVVFDSVGS 125
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
A ++++LQGFP G P+RI+FAK
Sbjct: 126 ATTALRSLQGFPFLGKPMRIQFAK 149
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 1/95 (1%)
Query: 11 RGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSY 70
RG E H G A S L L E L F RF + R
Sbjct: 194 RGKEAEAEEHVAGMALAAGEVSSMLMAQELPTECTEEMLAVLFRRFAGFHEIRLAGQRGI 253
Query: 71 AFINFKIEEDAIASMKALQGFPLA-GNPLRIEFAK 104
AFI F+ E A + +A GF L+ + L++ +AK
Sbjct: 254 AFIEFRDEVSARTAFQAYNGFKLSQTDALKLTYAK 288
>gi|358384661|gb|EHK22258.1| hypothetical protein TRIVIDRAFT_71507 [Trichoderma virens Gv29-8]
Length = 297
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 47/108 (43%), Gaps = 17/108 (15%)
Query: 3 RGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV 62
RGG ER G ++ +R L V N+S EE+ L D F RFG + V
Sbjct: 198 RGGAGERMGGSKYGERDDFA-----------TLRVTNVSEMAEESELRDMFERFGRVTRV 246
Query: 63 AFQPGRS------YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
R +AFI+F DA+ + + GF LR+EFAK
Sbjct: 247 FLAKDRETGMAKGFAFISFADHSDAVTACNKMDGFGFKHLILRVEFAK 294
>gi|148908052|gb|ABR17145.1| unknown [Picea sitchensis]
Length = 263
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
+R L+VGNL ++ E + D F ++G + V + P R Y FI F+ DA +++
Sbjct: 6 TRTLYVGNLPGDVREGEIEDLFYKYGRIIDVDLKVPPRPPGYCFIEFEDARDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ +R+EFA
Sbjct: 66 DGYNFDGHRIRVEFA 80
>gi|197098416|ref|NP_001127235.1| nucleolar protein 8 [Pongo abelii]
gi|55726654|emb|CAH90090.1| hypothetical protein [Pongo abelii]
Length = 1167
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS +I EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYININVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|332026895|gb|EGI66996.1| Heterogeneous nuclear ribonucleoprotein Q [Acromyrmex echinatior]
Length = 724
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R L+V NL+ + E L + F ++G++E V + + YAFI+F+ ++A+ +M L G
Sbjct: 383 RVLYVRNLTQDCSEEKLKESFEQYGKIERV--KKIKDYAFIHFEDRDNAVKAMNELNGKE 440
Query: 93 LAGNPLRIEFAK 104
+ G+ + + AK
Sbjct: 441 MGGSHIEVSLAK 452
>gi|48474967|sp|Q9JJW6.1|REFP2_MOUSE RecName: Full=RNA and export factor-binding protein 2
gi|7159945|emb|CAB76384.1| RNA and export factor binding protein 2-I [Mus musculus]
Length = 218
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINF 75
SG GG L V NL + +A++ + F FG L+ A RS A ++F
Sbjct: 63 SGCGGGEGVETGAKLLVSNLDFGVSDADIQELFAEFGTLKKAAVDYDRSGRSLGTADVHF 122
Query: 76 KIEEDAIASMKALQGFPLAGNPLRIEFA 103
+ DA+ +MK +G PL G P+ I+
Sbjct: 123 ERRADALKAMKQYKGVPLDGRPMDIQLV 150
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI E L F FG +ES+ + GRS Y FI F E A +++ L
Sbjct: 235 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 294
Query: 89 QGFPLAGNPLRI 100
GF LAG P+++
Sbjct: 295 NGFELAGRPMKV 306
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGE-LESVAF---QPGRS--YAFINFKIEEDAIASMKA 87
++VGNLS N + L D F++FG+ L+S+ + GRS + F+ F E+A S++
Sbjct: 5 KVYVGNLSWNTTDDTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISIQQ 64
Query: 88 LQGFPLAGNPLRIEFAKA 105
+ PL G +R+ A A
Sbjct: 65 MNEQPLDGRNIRVNMANA 82
>gi|159475431|ref|XP_001695822.1| hypothetical protein CHLREDRAFT_80366 [Chlamydomonas reinhardtii]
gi|158275382|gb|EDP01159.1| predicted protein [Chlamydomonas reinhardtii]
Length = 170
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 20 HSGGGGRANTPPSRHLWVGNLS-HNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIE 78
S + +T PSR L+V N E ++ F RFG L V Q +SY+F+ F+
Sbjct: 79 KSEADRKRDTKPSRTLFVVNFDVRRTTERDIERYFGRFGRLTRV--QIKKSYSFVQFQNV 136
Query: 79 EDAIASMKALQGFPLAGNPLRIEFAK 104
EDAI +M+ G + G L +E+ +
Sbjct: 137 EDAIKAMERANGAQMEGRTLAVEYVQ 162
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P R L++GN + EE ++ ++G +E + + G YAF+ + +ED +++ L
Sbjct: 5 PDRPLFIGNFEYEAEERDIVRLMEKYGPVEKIDMKQG--YAFVCMRYKEDGDVAIRKLDR 62
Query: 90 -GFPLAGNPLRIEFAK 104
+ L++E+A+
Sbjct: 63 TEWGYKKRMLKVEWAQ 78
>gi|2896146|gb|AAD09608.1| transcriptional coactivator ALY, partial [Homo sapiens]
Length = 233
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQ 89
L V NL + +A++ + F FG L+ A RS A ++F+ + DA+ +MK
Sbjct: 84 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTANVHFERKADALKAMKQYN 143
Query: 90 GFPLAGNPLRIEFAKA 105
GFPL G P+ I+ +
Sbjct: 144 GFPLDGRPMNIQLVTS 159
>gi|401623907|gb|EJS41986.1| nop13p [Saccharomyces arboricola H-6]
Length = 401
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS ++ + L F G++ + F+ + +AFI+FK EE
Sbjct: 231 SKNPPSRILFVGNLSFDVTDDLLKKHFQHCGDIIKIRMATFEDSGKCKGFAFIDFKNEEG 290
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
+ ++K +AG PLR+E+ +
Sbjct: 291 STNALKDKSCRKIAGRPLRMEYGE 314
>gi|410042873|ref|XP_003312216.2| PREDICTED: nucleolar protein 8 [Pan troglodytes]
gi|410226524|gb|JAA10481.1| nucleolar protein 8 [Pan troglodytes]
gi|410252162|gb|JAA14048.1| nucleolar protein 8 [Pan troglodytes]
gi|410308776|gb|JAA32988.1| nucleolar protein 8 [Pan troglodytes]
gi|410339505|gb|JAA38699.1| nucleolar protein 8 [Pan troglodytes]
Length = 1169
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS +I EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|119583218|gb|EAW62814.1| nucleolar protein 8, isoform CRA_a [Homo sapiens]
gi|119583220|gb|EAW62816.1| nucleolar protein 8, isoform CRA_a [Homo sapiens]
Length = 1173
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS +I EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|5916179|gb|AAD55931.1|AF156529_1 Msx2 interacting nuclear target protein [Mus musculus]
Length = 3576
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + P+ +W+ LS N+ + LT F R+G + V F + A + + EDA A+
Sbjct: 442 GFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAA 501
Query: 85 MKALQGFPLAGNPLRIEFA 103
+K +G + GN ++++FA
Sbjct: 502 VKETKGRKIGGNKIKVDFA 520
>gi|37999864|sp|Q62504.2|MINT_MOUSE RecName: Full=Msx2-interacting protein; AltName:
Full=SMART/HDAC1-associated repressor protein; AltName:
Full=SPEN homolog
Length = 3644
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + P+ +W+ LS N+ + LT F R+G + V F + A + + EDA A+
Sbjct: 510 GFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAA 569
Query: 85 MKALQGFPLAGNPLRIEFA 103
+K +G + GN ++++FA
Sbjct: 570 VKETKGRKIGGNKIKVDFA 588
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSY-----AFINF 75
+RHLWVGNL N+ E + + F R+G +ESV P R AF++F
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDF 53
>gi|405960114|gb|EKC26061.1| Ankyrin repeat and SOCS box protein 8 [Crassostrea gigas]
Length = 1029
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 7/93 (7%)
Query: 13 GRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAF 72
GRF+ + G PS +WVG L + L +F RFG +E + + +SYA+
Sbjct: 319 GRFQCKI-----GYGKVTPSTCIWVGGLGPWVTHQMLEREFDRFGIIERIEWPQSKSYAY 373
Query: 73 INFKIEEDAIASMKALQGFPLAGNP--LRIEFA 103
+ + + A A+ ++G PL G LRI+FA
Sbjct: 374 VLYDNIDAAQAACSEMRGAPLGGQDRRLRIDFA 406
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-----PGRSYAFINF 75
+R L+VGNL +NI + L D F ++G LE + + G +YAFI F
Sbjct: 252 TRTLFVGNLDYNITDEELKDVFEKYGFLEEIDIKRPQRGQGNAYAFIKF 300
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ-----PGRS--YAFINFKIEEDAIASMKA 87
L+VGN+ ++ E +L + F +GELE V Q PGRS Y F+ F A ++
Sbjct: 282 LYVGNIHFSVTEKDLQEIFEPYGELEQVILQRDELNPGRSKGYGFVQFVDPTHAKDALAE 341
Query: 88 LQGFPLAGNPLRI 100
+ GF LAG +R+
Sbjct: 342 MNGFELAGRQIRV 354
>gi|120587001|ref|NP_062737.2| msx2-interacting protein [Mus musculus]
Length = 3643
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + P+ +W+ LS N+ + LT F R+G + V F + A + + EDA A+
Sbjct: 511 GFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAA 570
Query: 85 MKALQGFPLAGNPLRIEFA 103
+K +G + GN ++++FA
Sbjct: 571 VKETKGRKIGGNKIKVDFA 589
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSY-----AFINF 75
+RHLWVGNL N+ E + + F R+G +ESV P R AF++F
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKILPKRGSEGGVAAFVDF 53
>gi|13094237|dbj|BAB32786.1| Msx-2 interacting nuclear target protein [Mus musculus]
Length = 3551
Score = 47.8 bits (112), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + P+ +W+ LS N+ + LT F R+G + V F + A + + EDA A+
Sbjct: 442 GFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAA 501
Query: 85 MKALQGFPLAGNPLRIEFA 103
+K +G + GN ++++FA
Sbjct: 502 VKETKGRKIGGNKIKVDFA 520
>gi|299117380|emb|CBN75336.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 281
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 11/82 (13%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----------QPGRSYAFINFKIEED 80
P+ L+VGNLS+ + EA + F FG++ F +P R + F+ + +D
Sbjct: 124 PNETLFVGNLSYRVSEAVIIKLFTPFGKVVREQFCYHKVGPRLGEP-RGFCFVEYSNVDD 182
Query: 81 AIASMKALQGFPLAGNPLRIEF 102
A +++AL G L G PLR+ F
Sbjct: 183 AAKAIRALHGRKLYGRPLRVRF 204
>gi|385301669|gb|EIF45843.1| nop13p [Dekkera bruxellensis AWRI1499]
Length = 323
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
++ PPSR L+VGNL + E L +QF+ GE+ + F+ + +AF++FK EE
Sbjct: 111 SHNPPSRILFVGNLPFDTTEDQLREQFMHCGEIVKIRMATFEDSGKCKGFAFLDFKDEEG 170
Query: 81 AIASMKALQGFPLAGNPLRIEF 102
+++ + G LR+EF
Sbjct: 171 PSKALEDRSCHRVGGRELRMEF 192
>gi|330933733|ref|XP_003304275.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
gi|311319203|gb|EFQ87630.1| hypothetical protein PTT_16807 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
+VGNL+ +++L F FG + FQ R +AFI E+A ++ L G+ +
Sbjct: 308 CYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVN 367
Query: 95 GNPLRIEFAK 104
G PL+ + K
Sbjct: 368 GRPLKCSWGK 377
>gi|297743877|emb|CBI36847.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR L+VGNL +I E + D F ++G + + + P R YAF+ F+ DA +++
Sbjct: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ LR+E A
Sbjct: 66 DGYDFDGHRLRVELA 80
>gi|363747078|ref|XP_003643906.1| PREDICTED: uncharacterized protein LOC100858003, partial [Gallus
gallus]
Length = 434
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 14/99 (14%)
Query: 18 RTHSGGGGRANTP-------PSRH-------LWVGNLSHNIEEANLTDQFLRFGELESVA 63
R+HS R T PS+H LWVGN++ I + L F RFG+++S+
Sbjct: 322 RSHSKSHVRTTTTASPQHTLPSQHPARDCYPLWVGNITFKITKKVLQSCFSRFGQIQSIR 381
Query: 64 FQPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEF 102
P + AFINF+ + A A+ +A+ G L G L ++
Sbjct: 382 MLPEKYCAFINFQQKAAAEAAYRAMLGADLEGCRLALQL 420
>gi|356519721|ref|XP_003528518.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Glycine max]
Length = 137
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 29 TPPSR----HLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIE 78
+PPS L+VG LS +++ +L + F FG++ V GRS + F+ F E
Sbjct: 30 SPPSHASSNKLFVGGLSWSVDHKSLKEAFSSFGDVTEVTIVYDKDSGRSRGFGFVIFSNE 89
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
+DA + A+ G L G PLRI FA
Sbjct: 90 DDAKCAKDAMDGKALLGRPLRINFA 114
>gi|169621067|ref|XP_001803944.1| hypothetical protein SNOG_13737 [Phaeosphaeria nodorum SN15]
gi|111057641|gb|EAT78761.1| hypothetical protein SNOG_13737 [Phaeosphaeria nodorum SN15]
Length = 1106
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+GN+ + ++L F FG +ES ++ F+NF+ E A+ + L G
Sbjct: 445 PTRSLWLGNIPSSTTVSSLNVIFAAFGAIESTRVLTHKNCGFVNFENLESAVQAKSQLNG 504
Query: 91 ---FPLAGNPLRIEFAK 104
FP AG P+RI +AK
Sbjct: 505 KEIFPGAG-PVRIGYAK 520
>gi|307173250|gb|EFN64303.1| Heterogeneous nuclear ribonucleoprotein Q [Camponotus floridanus]
Length = 683
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R L+V NL+ + E L + F ++G++E V + + YAFI+F+ ++A+ +M L G
Sbjct: 336 RVLYVRNLTQDCSEEKLKESFEQYGKIERV--KKIKDYAFIHFEDRDNAVKAMNELNGKE 393
Query: 93 LAGNPLRIEFAK 104
+ G+ + + AK
Sbjct: 394 MGGSHIEVSLAK 405
>gi|46048234|ref|NP_060418.4| nucleolar protein 8 isoform a [Homo sapiens]
gi|74758950|sp|Q76FK4.1|NOL8_HUMAN RecName: Full=Nucleolar protein 8; AltName: Full=Nucleolar protein
Nop132
gi|45259447|dbj|BAD12268.1| nucleolar protein 8 [Homo sapiens]
Length = 1167
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS +I EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|169614620|ref|XP_001800726.1| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
gi|160702784|gb|EAT81850.2| hypothetical protein SNOG_10456 [Phaeosphaeria nodorum SN15]
Length = 506
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
+VGNL+ +++L F FG + FQ R +AFI E+A ++ L G+ +
Sbjct: 311 CYVGNLTPYTSQSDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVN 370
Query: 95 GNPLRIEFAK 104
G PL+ + K
Sbjct: 371 GRPLKCSWGK 380
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 8/80 (10%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF-------QPGRSYAFINFKIEEDAIA 83
PS L++GNLS N + N+ + F +FGE+ SV QP + + ++ + +DA
Sbjct: 286 PSETLFLGNLSFNADRDNIYEMFSKFGEIVSVRIPTHPETEQP-KGFGYVQYGNVDDAKK 344
Query: 84 SMKALQGFPLAGNPLRIEFA 103
++ ALQG + P+R++++
Sbjct: 345 ALDALQGEYIDNRPVRLDYS 364
>gi|341889616|gb|EGT45551.1| hypothetical protein CAEBREN_06053 [Caenorhabditis brenneri]
Length = 260
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR--SYAFINFKIEEDAIASMKALQ 89
+ ++VGNL ++ + + D F ++G ++ + + GR ++AF+ F+ DA +++A
Sbjct: 9 DQKVYVGNLPGDVRDKEVEDIFHKYGRIKYIDIKSGRGPAFAFVEFEDHRDAEDAVRARD 68
Query: 90 GFPLAGNPLRIEFA 103
G+ G +R+EF
Sbjct: 69 GYEFDGRRIRVEFT 82
>gi|324505959|gb|ADY42552.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
gi|324526563|gb|ADY48690.1| Heterogeneous nuclear ribonucleoprotein Q, partial [Ascaris suum]
Length = 248
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL + E L + F GE+E + R YAFI+FK E A+ +M+AL G L
Sbjct: 7 LYVRNLKEAVTEEQLKEMFAAHGEVERA--KKIRDYAFIHFKEREPALKAMEALNGTVLE 64
Query: 95 GNPLRIEFAK 104
G + I AK
Sbjct: 65 GIAIEISLAK 74
>gi|164656166|ref|XP_001729211.1| hypothetical protein MGL_3678 [Malassezia globosa CBS 7966]
gi|159103101|gb|EDP41997.1| hypothetical protein MGL_3678 [Malassezia globosa CBS 7966]
Length = 328
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S+ L+VGNL N ++ + F FG + + PGR YAF+ F+ DA + A Q
Sbjct: 244 SKTLYVGNLPDNANLPDIMNIFSSFGNVINAQMFPGRHYAFVTFQFSSDANKAWDASQSN 303
Query: 92 P--LAGNPLRIEFAK 104
P +AG L++ +A+
Sbjct: 304 PPNMAGQTLKVGWAR 318
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 65 QPGRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
QP +YA+I + + A ++ LQGF LAG PL +E+A
Sbjct: 63 QPKPTYAWIQYMRQASADMAITYLQGFMLAGLPLFLEWA 101
>gi|307188505|gb|EFN73242.1| Putative RNA-binding protein 15B [Camponotus floridanus]
Length = 772
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +WVG L L +F RFG ++ + + G S A+I + + A A+
Sbjct: 381 GYGKATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDSNAYILYDSIDAAQAA 440
Query: 85 MKALQGFPLAG--NPLRIEFA 103
+K ++GFPL G LR++FA
Sbjct: 441 VKEMRGFPLGGPDRRLRVDFA 461
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 237 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 290
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 291 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 329
>gi|194899678|ref|XP_001979385.1| GG24121 [Drosophila erecta]
gi|190651088|gb|EDV48343.1| GG24121 [Drosophila erecta]
Length = 666
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ ++ E L +QF ++G++E V + + YAFI+F+ + A+ +M+ L G +
Sbjct: 347 LYVRNLTQDVSEDKLKEQFEQYGKVERV--KKIKDYAFIHFEDRDSAVEAMRGLNGKEIG 404
Query: 95 GNPLRIEFAK 104
+ + + AK
Sbjct: 405 ASNIEVSLAK 414
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 214 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 267
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 268 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 306
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|221041852|dbj|BAH12603.1| unnamed protein product [Homo sapiens]
Length = 337
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 74 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 127
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 128 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>gi|170046410|ref|XP_001850759.1| peptidyl-prolyl cis-trans isomerase E [Culex quinquefasciatus]
gi|167869182|gb|EDS32565.1| peptidyl-prolyl cis-trans isomerase E [Culex quinquefasciatus]
Length = 308
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMK 86
R ++VG LS + E + D F+ FG+L + Q R +AFI F+ EDA A++
Sbjct: 6 RTVYVGGLSDEVTEKLINDAFIPFGDLVDIQMPVDYESQKHRGFAFIEFENAEDAAAAVD 65
Query: 87 ALQGFPLAGNPLRIEFAK 104
+ L G +R+ AK
Sbjct: 66 NMNDSELCGRTVRVNVAK 83
>gi|410055060|ref|XP_003953766.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391517|ref|XP_004062119.1| PREDICTED: RNA-binding protein 39 isoform 6 [Gorilla gorilla
gorilla]
gi|20988961|gb|AAH30493.1| Rbm39 protein [Mus musculus]
gi|34364789|emb|CAE45833.1| hypothetical protein [Homo sapiens]
gi|111598490|gb|AAH82607.1| Rbm39 protein [Mus musculus]
gi|119596570|gb|EAW76164.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_d [Homo
sapiens]
gi|149030835|gb|EDL85862.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_g [Rattus
norvegicus]
Length = 367
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 74 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 127
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 128 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 264 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 317
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 318 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 356
>gi|324506631|gb|ADY42829.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
Length = 341
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL + E L + F GE+E + R YAFI+FK E A+ +M+AL G L
Sbjct: 100 LYVRNLKEAVTEEQLKEMFAAHGEVERA--KKIRDYAFIHFKEREPALKAMEALNGTVLE 157
Query: 95 GNPLRIEFAK 104
G + I AK
Sbjct: 158 GIAIEISLAK 167
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 209 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 262
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 263 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 301
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 222 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 275
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 276 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 314
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 209 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 262
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 263 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 301
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|442620153|ref|NP_001262779.1| syncrip, isoform M [Drosophila melanogaster]
gi|440217681|gb|AGB96159.1| syncrip, isoform M [Drosophila melanogaster]
Length = 699
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ ++ E L +QF ++G++E V + + YAFI+F+ + A+ +M+ L G +
Sbjct: 376 LYVRNLTQDVSEDKLKEQFEQYGKVERV--KKIKDYAFIHFEDRDSAVEAMRGLNGKEIG 433
Query: 95 GNPLRIEFAK 104
+ + + AK
Sbjct: 434 ASNIEVSLAK 443
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 235 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 288
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 289 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 327
>gi|407918740|gb|EKG12006.1| hypothetical protein MPH_10901 [Macrophomina phaseolina MS6]
Length = 1203
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+GN+ + ++L F FG +ES ++ F+NF+ E A+ + + L G
Sbjct: 474 PTRALWLGNIPSSTTVSSLNVIFNVFGPIESTRVLTHKNCGFVNFESLESAVRAKQQLNG 533
Query: 91 ---FPLAGNPLRIEFAKA 105
FP AG P+RI +AK
Sbjct: 534 KEIFPGAG-PVRIGYAKV 550
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 205 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 258
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 259 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 297
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 204 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 257
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 258 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 296
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAI 82
T P R L+VG+L NI E L F FG+++++ + GRS Y FI F+ EDA
Sbjct: 259 TGPMR-LYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAK 317
Query: 83 ASMKALQGFPLAGNPLRI 100
+++ L GF LAG P+++
Sbjct: 318 KALEQLNGFELAGRPMKV 335
>gi|31873732|emb|CAD97833.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 74 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 127
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 128 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 198 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 251
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 252 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 290
>gi|403412253|emb|CCL98953.1| predicted protein [Fibroporia radiculosa]
Length = 1287
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
+G + + P+R LW+G++ A + F +G +ES ++ FINF+ +D
Sbjct: 555 AGMDAQLQSTPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDD 614
Query: 81 AIASMKALQGFPLAGN---PLRIEFAKA 105
A+ + KAL G + G+ +RI FAK
Sbjct: 615 AVRARKALNGRDVLGSDVGAIRIGFAKV 642
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P+R LW+GNL ++ L F +G +ES+ P + F+NF + DAI + + +
Sbjct: 439 PTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLN 498
Query: 90 ------GFPLAGNPLRIEFAKA 105
G P G +RI F KA
Sbjct: 499 RLGGDIGMP-NGQTVRIGFGKA 519
>gi|355715684|gb|AES05403.1| RNA binding motif protein 39 [Mustela putorius furo]
Length = 271
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 111 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 164
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 165 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 203
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 139 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 192
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 193 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 231
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 2 GRGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
GR G R+ G E S GG +L V L NI E +L F+ G +ES
Sbjct: 35 GRAGSNARYWGSMSEGGGLSAAGGDTA---RTNLIVNYLPQNITEKDLYAMFVTIGPIES 91
Query: 62 V----AFQPGRSYAF--INFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
F+ G SY F +NF EEDA ++ G+ L L++ +A+
Sbjct: 92 CRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYAR 140
>gi|148681432|gb|EDL13379.1| SPEN homolog, transcriptional regulator (Drosophila), isoform CRA_a
[Mus musculus]
Length = 3186
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + P+ +W+ LS N+ + LT F R+G + V F + A + + EDA A+
Sbjct: 443 GFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAA 502
Query: 85 MKALQGFPLAGNPLRIEFA 103
+K +G + GN ++++FA
Sbjct: 503 VKETKGRKIGGNKIKVDFA 521
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|442620147|ref|NP_001262777.1| syncrip, isoform J [Drosophila melanogaster]
gi|440217678|gb|AGB96157.1| syncrip, isoform J [Drosophila melanogaster]
Length = 761
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ ++ E L +QF ++G++E V + + YAFI+F+ + A+ +M+ L G +
Sbjct: 384 LYVRNLTQDVSEDKLKEQFEQYGKVERV--KKIKDYAFIHFEDRDSAVEAMRGLNGKEIG 441
Query: 95 GNPLRIEFAK 104
+ + + AK
Sbjct: 442 ASNIEVSLAK 451
>gi|281343933|gb|EFB19517.1| hypothetical protein PANDA_017544 [Ailuropoda melanoleuca]
Length = 1155
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAIA 83
R L+VG L NI E +L +QF RFGE+ V P + +A+IN ++ E D
Sbjct: 8 RRLFVGGLGQNISETDLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINIRVAEADLNK 67
Query: 84 SMKALQGFPLAGNPLRIEFAK 104
M AL G L+I+ AK
Sbjct: 68 CMSALNKTKWKGGTLQIQLAK 88
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
+ N P R L+VG+L NI E L F FG++ES+ + GRS Y FI F E
Sbjct: 243 KGNAGPMR-LYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTE 301
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A ++ L GF LAG P+++
Sbjct: 302 CAKKALDQLNGFELAGRPMKV 322
>gi|410055058|ref|XP_003316934.2| PREDICTED: uncharacterized protein LOC458443 isoform 4 [Pan
troglodytes]
gi|410055062|ref|XP_003953767.1| PREDICTED: uncharacterized protein LOC458443 [Pan troglodytes]
gi|426391515|ref|XP_004062118.1| PREDICTED: RNA-binding protein 39 isoform 5 [Gorilla gorilla
gorilla]
gi|426391519|ref|XP_004062120.1| PREDICTED: RNA-binding protein 39 isoform 7 [Gorilla gorilla
gorilla]
gi|119596566|gb|EAW76160.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
gi|119596571|gb|EAW76165.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_b [Homo
sapiens]
Length = 373
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 74 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 127
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 128 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>gi|34365067|emb|CAE45890.1| hypothetical protein [Homo sapiens]
Length = 373
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 74 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 127
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 128 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 166
>gi|451850318|gb|EMD63620.1| hypothetical protein COCSADRAFT_329879 [Cochliobolus sativus
ND90Pr]
Length = 1118
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+GN+ + ++L F ++G +ES ++ F+N++ E A+ + L G
Sbjct: 447 PTRSLWLGNIPSSTTVSSLQVIFAQYGNIESTRVLTHKNCGFVNYENLESAVQAKSTLNG 506
Query: 91 ---FPLAGNPLRIEFAK 104
FP AG P+RI +AK
Sbjct: 507 KEIFPGAG-PVRIGYAK 522
>gi|148681433|gb|EDL13380.1| SPEN homolog, transcriptional regulator (Drosophila), isoform CRA_b
[Mus musculus]
Length = 3163
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + P+ +W+ LS N+ + LT F R+G + V F + A + + EDA A+
Sbjct: 443 GFGKSMPTNCVWLDGLSSNVSDQYLTRHFCRYGPVVKVVFDRLKGMALVLYSEIEDAQAA 502
Query: 85 MKALQGFPLAGNPLRIEFA 103
+K +G + GN ++++FA
Sbjct: 503 VKETKGRKIGGNKIKVDFA 521
>gi|449547615|gb|EMD38583.1| hypothetical protein CERSUDRAFT_113767 [Ceriporiopsis subvermispora
B]
Length = 1280
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P+R LW+GNL + L F +G +ES+ P + F+NF + DAI + + +
Sbjct: 441 PTRSLWIGNLDSTVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLN 500
Query: 90 ------GFPLAGNPLRIEFAKA 105
G P G +RI F KA
Sbjct: 501 RLGGDIGMP-NGQTVRIGFGKA 521
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ A + F +G +ES ++ FINF+ +DA+ + KAL G
Sbjct: 567 PTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKALNG 626
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ +RI FAK
Sbjct: 627 RDVLGSDVGAIRIGFAKV 644
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 209 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 262
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 263 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 301
>gi|343427154|emb|CBQ70682.1| related to NAM8-meiotic recombination protein [Sporisorium
reilianum SRZ2]
Length = 968
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VG LS I EA L F FGE+ V PG+ F+ + ++DA +++ + GFP+
Sbjct: 581 VFVGGLSSLISEATLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAIQRMNGFPIL 640
Query: 95 GNPLRIEFAKA 105
+ +R+ + ++
Sbjct: 641 NSKIRLSWGRS 651
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 228 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 281
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 282 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 320
>gi|388852481|emb|CCF53883.1| related to RNA-binding region containing protein 2 [Ustilago
hordei]
Length = 678
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF--QPG----RSYAFINFKIEEDAIASMKAL 88
L+VG+L ++ + N+ F FGE+E V +PG + + FI FK EDA +++ +
Sbjct: 429 LYVGSLHFSLTDENVKAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHAEDAKKALEQM 488
Query: 89 QGFPLAGNPLRI 100
GF LAG +R+
Sbjct: 489 NGFELAGRAIRV 500
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|328775847|ref|XP_624844.3| PREDICTED: putative RNA-binding protein 15B [Apis mellifera]
gi|380027819|ref|XP_003697614.1| PREDICTED: putative RNA-binding protein 15B-like [Apis florea]
Length = 767
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +WVG L L +F RFG ++ + + G S A+I + + A A+
Sbjct: 381 GYGKATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDSNAYILYDSIDAAQAA 440
Query: 85 MKALQGFPLAG--NPLRIEFA 103
+K ++GFPL G LR++FA
Sbjct: 441 VKEMRGFPLGGPDRRLRVDFA 461
>gi|322789770|gb|EFZ14936.1| hypothetical protein SINV_14451 [Solenopsis invicta]
Length = 734
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +WVG L L +F RFG ++ + + G S A+I + + A A+
Sbjct: 342 GYGKATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDSNAYILYDSIDAAQAA 401
Query: 85 MKALQGFPLAG--NPLRIEFA 103
+K ++GFPL G LR++FA
Sbjct: 402 VKEMRGFPLGGPDRRLRVDFA 422
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 214 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 267
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 268 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 306
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|452000341|gb|EMD92802.1| hypothetical protein COCHEDRAFT_1172323 [Cochliobolus
heterostrophus C5]
Length = 1118
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+GN+ + ++L F ++G +ES ++ F+N++ E A+ + L G
Sbjct: 447 PTRSLWLGNIPSSTTVSSLQVIFAQYGNIESTRVLTHKNCGFVNYENLESAVQAKSTLNG 506
Query: 91 ---FPLAGNPLRIEFAK 104
FP AG P+RI +AK
Sbjct: 507 KEIFPGAG-PVRIGYAK 522
>gi|449265754|gb|EMC76900.1| RNA-binding protein 39, partial [Columba livia]
Length = 423
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 132 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 185
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 186 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 224
>gi|189209586|ref|XP_001941125.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977218|gb|EDU43844.1| RNA binding protein [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 1107
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+GN+ + ++L F ++G +ES ++ F+N++ E A+ + L G
Sbjct: 445 PTRSLWLGNIPSSTTVSSLQVIFAQYGAIESTRVLTHKNCGFVNYENLESAVQAKSTLNG 504
Query: 91 ---FPLAGNPLRIEFAK 104
FP AG P+RI +AK
Sbjct: 505 KEIFPGAG-PVRIGYAK 520
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKA 87
+L+VGNLS N++E LT +F FG +++V GRS Y ++ F+ +DA +++A
Sbjct: 254 NLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEFESADDAAKALEA 313
Query: 88 LQGFPLAGNPLRIEF 102
G+ L LR++
Sbjct: 314 RHGYTLDNRELRVDL 328
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 28 NTP--PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS------YAFINFKIEE 79
+TP PS L+VGN+S + + +T+ F +G + +V R + ++ F E
Sbjct: 354 DTPSQPSATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIE 413
Query: 80 DAIASMKALQGFPLAGNPLRIEFA 103
+A ++M+ L G +AG P+R++++
Sbjct: 414 EAKSAMENLTGVDIAGRPIRLDYS 437
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|350855197|emb|CAZ35550.2| hypothetical protein Smp_166590 [Schistosoma mansoni]
Length = 1646
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKI 77
G +++ S+ LW+ NL + ++ + +G+++++ +P YA++ +
Sbjct: 300 GSKSDLSSSKFLWISNLPQGVRAVDIKEMCAPYGKVQTIKIVGSKKSKPPSIYAYLIMET 359
Query: 78 EEDAIASMKALQGFPLAGNPLRIEFAKA 105
E A+ +KALQG +GN L+I+ A+
Sbjct: 360 SEAAVRLVKALQGVKFSGNELKIKQAEG 387
>gi|256086242|ref|XP_002579311.1| hypothetical protein [Schistosoma mansoni]
Length = 1678
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKI 77
G +++ S+ LW+ NL + ++ + +G+++++ +P YA++ +
Sbjct: 300 GSKSDLSSSKFLWISNLPQGVRAVDIKEMCAPYGKVQTIKIVGSKKSKPPSIYAYLIMET 359
Query: 78 EEDAIASMKALQGFPLAGNPLRIEFAKA 105
E A+ +KALQG +GN L+I+ A+
Sbjct: 360 SEAAVRLVKALQGVKFSGNELKIKQAEG 387
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ------PGRSYAFINFKIEEDAIASMKAL 88
L+VG+L +NI E L F FG +ESV Q + + F+NF+ A +M+ +
Sbjct: 282 LYVGSLHYNITEPMLRAIFEPFGTVESVQLQYDSETNRSKGFGFVNFREAGAAKRAMEQM 341
Query: 89 QGFPLAGNPLRI 100
GF LAG P+++
Sbjct: 342 NGFELAGRPMKV 353
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 2 GRGGGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELES 61
GR G R+ G E S GG +L V L NI E +L F+ G +ES
Sbjct: 35 GRAGSNARYWGSMSEGGGLSAAGGDTA---RTNLIVNYLPQNITEKDLYAMFVTIGPIES 91
Query: 62 V----AFQPGRSYAF--INFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
F+ G SY F +NF EEDA ++ G+ L L++ +A+
Sbjct: 92 CRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKVSYAR 140
>gi|409079460|gb|EKM79821.1| hypothetical protein AGABI1DRAFT_57019, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 366
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 44/79 (55%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
+N P + ++VG LS I E L F FG++ V G+ F+ F + DA +++
Sbjct: 224 SNDPYNTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIE 283
Query: 87 ALQGFPLAGNPLRIEFAKA 105
+QGFP+ G+ +R+ + ++
Sbjct: 284 KMQGFPIGGSRIRLSWGRS 302
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 198 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 251
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 252 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 290
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|307212325|gb|EFN88129.1| Heterogeneous nuclear ribonucleoprotein Q [Harpegnathos saltator]
Length = 649
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R L+V NL+ + E L + F ++G++E V + + YAFI+F+ ++A+ +M L G
Sbjct: 330 RVLYVRNLTQDCSEEKLKESFEQYGKIERV--KKIKDYAFIHFEDRDNAVRAMNELNGKE 387
Query: 93 LAGNPLRIEFAK 104
+ G+ + + AK
Sbjct: 388 MGGSHIEVSLAK 399
>gi|224128490|ref|XP_002320345.1| predicted protein [Populus trichocarpa]
gi|222861118|gb|EEE98660.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR L+VGNL +I E + D F ++G + + + P R YAF+ F+ DA +++
Sbjct: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ LR+E A
Sbjct: 66 DGYDFDGHRLRVELA 80
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 209 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 262
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 263 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 301
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 308 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 361
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 362 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 400
>gi|395644710|ref|ZP_10432570.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
gi|395441450|gb|EJG06207.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
Length = 86
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S L+VGNL++ E L++ F +G+++S P + + F+ F E+A +M AL
Sbjct: 3 SSTLYVGNLNYETTEEQLSELFSAYGDVKSARIIPRKGFGFVEFASVEEAEKAMNALNET 62
Query: 92 PLAGNPLRIEFAKA 105
G LRI+ A+A
Sbjct: 63 QCMGRTLRIDEARA 76
>gi|255945137|ref|XP_002563336.1| Pc20g08130 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588071|emb|CAP86142.1| Pc20g08130 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 369
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 11 RGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQ-- 65
R + E + ++ G ++ PPS+ ++VGNLS ++ + NL + F + G + +V FQ
Sbjct: 163 RPEKSESQENAAGAAKSGHPPSKRIFVGNLSFDVTKENLEENFAKCGTVTNVHMATFQDT 222
Query: 66 -PGRSYAFINFKIEEDAIASMKALQGFPLA 94
+ YA++ F ED A+ A++GF L
Sbjct: 223 GKCKGYAWVEF---EDLAAAEAAVRGFMLV 249
>gi|168009612|ref|XP_001757499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691193|gb|EDQ77556.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL ++ E + D F ++G + + + P R Y FI F+ DA +++
Sbjct: 6 SRTIYVGNLPGDVREREIEDLFYKYGRIVDIDLKLPPRPPGYCFIEFEDGRDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ GN LR+E A
Sbjct: 66 DGYNFDGNRLRVEIA 80
>gi|432948645|ref|XP_004084109.1| PREDICTED: msx2-interacting protein-like, partial [Oryzias latipes]
Length = 135
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSY-----AFINFKIEEDAIASMK 86
+RHLWVGNL N+ E + + F R+G +ESV P R AF++F D ++ K
Sbjct: 5 TRHLWVGNLPENVREDKIIEHFKRYGRVESVKVLPKRGSEGGVAAFVDFV---DIKSAQK 61
Query: 87 ALQGFPLAGN-PLRIEF 102
A G+ LR ++
Sbjct: 62 AHNAINKMGDRDLRTDY 78
>gi|13278367|gb|AAH04000.1| Rbm39 protein [Mus musculus]
Length = 429
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 130 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 183
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 184 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 222
>gi|406864579|gb|EKD17624.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1124
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+GN+ + LT+ F G +E+V ++ F+N+ E A + + G
Sbjct: 442 PTRALWLGNIPASTTMTTLTEMFKVHGSIENVRVLTHKNCGFVNYHHVESAAQAKNMMNG 501
Query: 91 ---FPLAGNPLRIEFAK 104
FP AG P+RI FAK
Sbjct: 502 TEIFPGAG-PIRINFAK 517
>gi|330915071|ref|XP_003296889.1| hypothetical protein PTT_07116 [Pyrenophora teres f. teres 0-1]
gi|311330744|gb|EFQ95016.1| hypothetical protein PTT_07116 [Pyrenophora teres f. teres 0-1]
Length = 1076
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+GN+ + ++L F ++G +ES ++ F+N++ E A+ + L G
Sbjct: 402 PTRSLWLGNIPSSTTVSSLQVIFAQYGAIESTRVLTHKNCGFVNYENLESAVQAKSTLNG 461
Query: 91 ---FPLAGNPLRIEFAK 104
FP AG P+RI +AK
Sbjct: 462 KEIFPGAG-PVRIGYAK 477
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
+A+T P R L+VG+L NI E L F FG+++ + + GRS Y FI + +
Sbjct: 334 KAHTGPMR-LYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNAD 392
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA +++ L GF LAG P+++
Sbjct: 393 DAKKALEQLNGFELAGRPMKV 413
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|350423266|ref|XP_003493425.1| PREDICTED: putative RNA-binding protein 15B-like [Bombus impatiens]
Length = 770
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +WVG L L +F RFG ++ + + G S A+I + + A A+
Sbjct: 380 GYGKATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDSNAYILYDSIDAAQAA 439
Query: 85 MKALQGFPLAG--NPLRIEFA 103
+K ++GFPL G LR++FA
Sbjct: 440 VKEMRGFPLGGPDRRLRVDFA 460
>gi|290562822|gb|ADD38806.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQ----FLRFGE-LESVAFQP--GRSYAFINFKIEEDAIA 83
PS +++ NL+ +++ +L F +FG+ LE VA + R AF+ FK A
Sbjct: 5 PSHTIYINNLNEKVKKEDLKKSLYAIFSQFGQILEIVALKTLKMRGQAFVIFKEITSATN 64
Query: 84 SMKALQGFPLAGNPLRIEFAKA 105
+M+++QGFP P+RI F+K
Sbjct: 65 AMRSMQGFPFYDKPMRIAFSKT 86
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-SYAFINFKIEEDAIASMKAL 88
PP++ L++ NL E L+ F +F + V P R AF+ F+ E + A+ +L
Sbjct: 140 PPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFENEVQSAAARGSL 199
Query: 89 QGFPLAGN-PLRIEFAK 104
QGF + N ++I FAK
Sbjct: 200 QGFKITPNASMKISFAK 216
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIAS 84
P+R L+VG+L NI EA + F FG ++SV + RS Y F+ F+ E A +
Sbjct: 214 PTR-LYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRA 272
Query: 85 MKALQGFPLAGNPLRI 100
M+ + GF LAG PL+I
Sbjct: 273 MEQMNGFELAGRPLKI 288
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 200 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 253
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 254 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 292
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 287 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 340
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 341 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 379
>gi|324510250|gb|ADY44287.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
Length = 272
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL + E L + F GE++ V + + YAFI+F E A+ +M+AL G L
Sbjct: 7 LYVRNLKEAVTEEQLKEMFSAHGEVDHV--KKIKDYAFIHFNEREPAVKAMEALNGTVLE 64
Query: 95 GNPLRIEFAK 104
G P+ I AK
Sbjct: 65 GVPIEISLAK 74
>gi|168016725|ref|XP_001760899.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687908|gb|EDQ74288.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 155
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG L+ + N+ + F FGE+ V GRS + F+ F ++DA A+++AL
Sbjct: 44 LFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQAL 103
Query: 89 QGFPLAGNPLRIEFA 103
G LAG +R+ +A
Sbjct: 104 DGRDLAGRTIRVNYA 118
>gi|301784637|ref|XP_002927732.1| PREDICTED: nucleolar protein 8-like [Ailuropoda melanoleuca]
Length = 1142
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAIA 83
R L+VG L NI E +L +QF RFGE+ V P + +A+IN ++ E D
Sbjct: 8 RRLFVGGLGQNISETDLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINIRVAEADLNK 67
Query: 84 SMKALQGFPLAGNPLRIEFAK 104
M AL G L+I+ AK
Sbjct: 68 CMSALNKTKWKGGTLQIQLAK 88
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 207 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 260
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 261 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 299
>gi|170032157|ref|XP_001843949.1| RNA recognition motif protein split ends [Culex quinquefasciatus]
gi|167871898|gb|EDS35281.1| RNA recognition motif protein split ends [Culex quinquefasciatus]
Length = 708
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ +WVG L L +F RFG ++ + + G + A+I + + A
Sbjct: 320 GYGKAT--PTTRIWVGGLGAWTSVTQLEREFDRFGAIKKIEYNKGDTQAYILYDSIDAAT 377
Query: 83 ASMKALQGFPLAGNP---LRIEFA 103
A++K ++GFPL G P +R++FA
Sbjct: 378 AAVKEMRGFPL-GAPDRRIRLDFA 400
>gi|158286924|ref|XP_309011.3| AGAP006733-PA [Anopheles gambiae str. PEST]
gi|157020700|gb|EAA04421.3| AGAP006733-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKAL 88
L V NL + E ++ + F FG L S + RS A + F+ DAI +MK
Sbjct: 123 KLLVSNLDFGVSETDINELFAEFGPLRSASVHYDRSGRSLGTADVVFERRSDAIKAMKQY 182
Query: 89 QGFPLAGNPLRIEFAKA 105
G PL G P+ I+ A +
Sbjct: 183 NGVPLDGRPMSIQMATS 199
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 323
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 230 EKNRAAALANNLQKGTAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 283
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 284 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 322
>gi|392595910|gb|EIW85233.1| hypothetical protein CONPUDRAFT_79901 [Coniophora puteana
RWD-64-598 SS2]
Length = 1277
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
+G + + P+R LW+G++ A + F +G +ES ++ FINF+ +D
Sbjct: 543 AGMDAQLQSSPTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDD 602
Query: 81 AIASMKALQGFPLAGN---PLRIEFAKA 105
A+ + KAL G + G+ +RI FAK
Sbjct: 603 AVRARKALNGRDVLGSDVGAIRIGFAKV 630
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P+R LW+GNL + L F +G +ES+ P + F+NF + DAI + +
Sbjct: 428 PTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLN 487
Query: 90 ------GFPLAGNPLRIEFAKA 105
G P G +RI F KA
Sbjct: 488 RLGGNIGMP-NGQTVRIGFGKA 508
>gi|426200456|gb|EKV50380.1| hypothetical protein AGABI2DRAFT_176766 [Agaricus bisporus var.
bisporus H97]
Length = 1296
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ A + F +G +ES ++ FINF+ +DA+ + KAL G
Sbjct: 579 PTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKALNG 638
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ +RI FAK
Sbjct: 639 RDVLGSDVGAIRIGFAKV 656
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
P+R LW+GNL ++ L F +G +ES+ P + F+NF + DA+
Sbjct: 455 PTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAL 506
>gi|410917420|ref|XP_003972184.1| PREDICTED: RNA and export factor-binding protein 2-like [Takifugu
rubripes]
Length = 232
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 20 HSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFIN 74
H+ G + S L V NL + +++L + F FG L+ + RS A ++
Sbjct: 79 HANGPQSSEAEGSAKLLVSNLDFGVSDSDLRELFAEFGPLKEASVHYDRSGRSKGTADVH 138
Query: 75 FKIEEDAIASMKALQGFPLAGNPLRIE 101
F+++ DA+ ++K G PL G+P++I+
Sbjct: 139 FELKADALKALKQYNGVPLDGHPMKIQ 165
>gi|340727193|ref|XP_003401933.1| PREDICTED: putative RNA-binding protein 15B-like [Bombus
terrestris]
Length = 770
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +WVG L L +F RFG ++ + + G S A+I + + A A+
Sbjct: 380 GYGKATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDSNAYILYDSIDAAQAA 439
Query: 85 MKALQGFPLAG--NPLRIEFA 103
+K ++GFPL G LR++FA
Sbjct: 440 VKEMRGFPLGGPDRRLRVDFA 460
>gi|340383163|ref|XP_003390087.1| PREDICTED: RNA-binding protein 4-like [Amphimedon queenslandica]
Length = 157
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+VGNLS + +L + F FG+++ VA G + F++F+ DA A++KAL
Sbjct: 7 LYVGNLSETVTSKHLKELFGNFGQVDEVAVLRG--FGFVHFRRNSDATAALKALDDTEFM 64
Query: 95 GNPLRIEFAKA 105
G+ ++++ + +
Sbjct: 65 GSHIQVQVSHS 75
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 18 RTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAF 72
RT G N+ P L+VGN+ +I E +L + F FGELE V Q R Y F
Sbjct: 269 RTTESTGHHPNSIPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDNGRSRGYGF 328
Query: 73 INFKIEEDAIASMKALQGFPLAGNPLRI 100
+ + K + GF LAG P+R+
Sbjct: 329 VQPE------RPSKKMNGFDLAGRPIRV 350
>gi|225714068|gb|ACO12880.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
gi|290462833|gb|ADD24464.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 233
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 30 PPSRH-LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL 88
P + H L++GN+S + E ++ F +G+L VA + G Y F+ F+ DA +++ L
Sbjct: 2 PGNHHRLYLGNISDDTRERDVEKFFKGYGKLREVALKNG--YGFVEFEDHRDADDAVQDL 59
Query: 89 QGFPLAGNPLRIEFAKA 105
G + G+ +R+EFA++
Sbjct: 60 DGKDMNGSRVRVEFARS 76
>gi|222641919|gb|EEE70051.1| hypothetical protein OsJ_30014 [Oryza sativa Japonica Group]
Length = 838
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 49/73 (67%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++LWVG +S +I + L ++F +FG+++ +AF ++ A+I+F EDAI++ +AL G
Sbjct: 62 KNLWVGGISSSISKEELEEEFKKFGKVDGIAFSRDQTSAYIDFDKLEDAISAHRALNGRV 121
Query: 93 LAGNPLRIEFAKA 105
L G L ++F ++
Sbjct: 122 LGGQELCVDFQRS 134
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 53 FLRFGELESVAFQPG-RSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
F G L+ V + G RSYAF+ F+ +A A++ ALQG + G+ +R+EFA+
Sbjct: 4 FSPHGALDCVMARAGPRSYAFVLFRSVPEARAALDALQGSKVKGSVVRLEFAR 56
>gi|28317322|gb|AAO39657.1| AT01548p, partial [Drosophila melanogaster]
Length = 626
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ ++ E L +QF ++G++E V + + YAFI+F+ + A+ +M+ L G +
Sbjct: 303 LYVRNLTQDVSEDKLKEQFEQYGKVERV--KKIKDYAFIHFEDRDSAVEAMRGLNGKEIG 360
Query: 95 GNPLRIEFAK 104
+ + + AK
Sbjct: 361 ASNIEVSLAK 370
>gi|383858004|ref|XP_003704493.1| PREDICTED: uncharacterized protein LOC100876513 [Megachile
rotundata]
Length = 772
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +WVG L L +F RFG ++ + + G S A+I + + A A+
Sbjct: 382 GYGKATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDSNAYILYDSIDAAQAA 441
Query: 85 MKALQGFPLAG--NPLRIEFA 103
+K ++GFPL G LR++FA
Sbjct: 442 VKEMRGFPLGGPDRRLRVDFA 462
>gi|332021060|gb|EGI61447.1| Putative RNA-binding protein 15B [Acromyrmex echinatior]
Length = 750
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +WVG L L +F RFG ++ + + G S A+I + + A A+
Sbjct: 359 GYGKATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDSNAYILYDSIDAAQAA 418
Query: 85 MKALQGFPLAG--NPLRIEFA 103
+K ++GFPL G LR++FA
Sbjct: 419 VKEMRGFPLGGPERRLRVDFA 439
>gi|307198742|gb|EFN79545.1| Putative RNA-binding protein 15B [Harpegnathos saltator]
Length = 774
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G P+ +WVG L L +F RFG ++ + + G S A+I + + A A+
Sbjct: 381 GYGKATPTTRIWVGGLGPWTSVPQLEREFDRFGAIKKIDYIKGDSNAYILYDSIDAAQAA 440
Query: 85 MKALQGFPLAG--NPLRIEFA 103
+K ++GFPL G LR++FA
Sbjct: 441 VKEMRGFPLGGPERRLRVDFA 461
>gi|21388662|dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG L+ + N+ + F FGE+ V GRS + F+ F ++DA A+++AL
Sbjct: 44 LFVGGLAWGTTDDNIKEAFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQAL 103
Query: 89 QGFPLAGNPLRIEFA 103
G LAG +R+ +A
Sbjct: 104 DGRDLAGRTIRVNYA 118
>gi|357116772|ref|XP_003560152.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 470
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
S G N P + ++VG L NI+E L F +GE+ V G+ F+ F
Sbjct: 308 SQGNDVQNDPNNTTIFVGGLDSNIDENYLRQVFTPYGEVGYVKIPVGKRCGFVQFTSRSC 367
Query: 81 AIASMKALQGFPLAGNPLRIEFAKA 105
A ++ AL G P+ GN +R+ + ++
Sbjct: 368 AEEAINALNGTPIGGNNVRLSWGRS 392
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ-----PGRS--YAFINFKIEEDAIASMKA 87
L+VGN+ ++ E +L D F FG LE V Q PGRS Y F+ F A ++
Sbjct: 279 LYVGNIHFSVTEGDLRDIFEPFGALEQVILQRDEANPGRSKGYGFVQFVDPAHAKNALAE 338
Query: 88 LQGFPLAGNPLRI 100
+ GF LAG +R+
Sbjct: 339 MNGFELAGRQIRV 351
>gi|147853033|emb|CAN81258.1| hypothetical protein VITISV_000965 [Vitis vinifera]
Length = 720
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDAIASMKAL 88
SR L+VGNL +I E + D F ++G + + + P R YAF+ F+ DA +++
Sbjct: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEESRDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ LR+E A
Sbjct: 66 DGYDFDGHRLRVELA 80
>gi|71005504|ref|XP_757418.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
gi|46096901|gb|EAK82134.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
Length = 1059
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VG LS I E L F FGE+ V PG+ F+ + ++DA +++ + GFP+
Sbjct: 623 VFVGGLSSLISEVTLRRYFEHFGEISYVKIPPGKGCGFVQYVRKQDAETAIQRMNGFPIL 682
Query: 95 GNPLRIEFAKA 105
+ +R+ + ++
Sbjct: 683 NSKIRLSWGRS 693
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG------RSYAFINFKIE 78
G A PPS L++GNLS + +E + + F G + +V + + ++ F
Sbjct: 336 GDAKNPPSDTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSV 395
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
EDA A+ A+ G +AG P+R+++A
Sbjct: 396 EDATAAYDAMMGADIAGRPVRLDYA 420
>gi|259149184|emb|CAY82426.1| Nop13p [Saccharomyces cerevisiae EC1118]
Length = 403
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS ++ + L F G++ + F+ + +AFI+FK EE
Sbjct: 233 SKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEG 292
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
+ ++K +AG PLR+E+ +
Sbjct: 293 STNALKDKSCRKIAGRPLRMEYGE 316
>gi|242247219|ref|NP_001156146.1| U1 small nuclear ribonucleoprotein A-like [Acyrthosiphon pisum]
gi|239790514|dbj|BAH71814.1| ACYPI003668 [Acyrthosiphon pisum]
Length = 224
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQ----FLRFGELESVAFQPGRSY---AFINFKIEED 80
+T P+ +++ NL+ I++ +L F +FG++ + G AF+ FK
Sbjct: 3 DTRPNHTIYINNLNEKIKKDDLKKSLYAIFSQFGQILDIVAMKGIKMNGQAFVIFKDITS 62
Query: 81 AIASMKALQGFPLAGNPLRIEFAKA 105
+ +++A+QGFP P+RI+FAK+
Sbjct: 63 STNALRAMQGFPFYDKPMRIQFAKS 87
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 22 GGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-SYAFINFKIEED 80
GG PP++ L++ NL E L+ F +F + V P R AF+ F+ E
Sbjct: 139 SGGNVPEQPPNQILFLTNLPDETTEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFENEHQ 198
Query: 81 AIASMKALQGFPLA-GNPLRIEFAK 104
+ + +L GF + + ++I FAK
Sbjct: 199 SNTAKLSLNGFKITPTHAMKITFAK 223
>gi|406507553|gb|AFS34620.1| lark, partial [Clunio marinus]
Length = 285
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L++GNL N + ++ F ++G++ V F ++Y F++F+ E DA ++ L G+ +
Sbjct: 9 LFIGNLDENTKTNDVRPLFEKYGKV--VEFDIVKNYGFVHFQNESDAXDAVANLNGYVIN 66
Query: 95 GNPLRIEFAKA 105
GN +++E AK+
Sbjct: 67 GNAIKVENAKS 77
>gi|159164266|pdb|2DNZ|A Chain A, Solution Structure Of The Second Rna Binding Domain Of Rna
Binding Motif Protein 23
Length = 95
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PGRS--YAFINFKIEEDAIASM 85
S L+VG+L NI E L F FG+++++ GRS Y FI F E A ++
Sbjct: 5 SSGLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAL 64
Query: 86 KALQGFPLAGNPLRI 100
+ L GF LAG P+R+
Sbjct: 65 EQLNGFELAGRPMRV 79
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 280 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 333
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 334 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 372
>gi|390602099|gb|EIN11492.1| hypothetical protein PUNSTDRAFT_131657 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 135
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ A + F +G +ES ++ FINF+ +DA+ + KAL G
Sbjct: 9 PTRTLWIGSIPSTTTPAAILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKALNG 68
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ +RI FAK
Sbjct: 69 RDILGSDVGAIRIGFAKV 86
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 7/78 (8%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAI 82
T P R L+VG+L NI E L F FG+++++ + GRS Y FI F+ EDA
Sbjct: 238 TGPMR-LYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAK 296
Query: 83 ASMKALQGFPLAGNPLRI 100
+++ L GF LAG P+++
Sbjct: 297 KALEQLNGFELAGRPMKV 314
>gi|50545429|ref|XP_500252.1| YALI0A19668p [Yarrowia lipolytica]
gi|49646117|emb|CAG84190.1| YALI0A19668p [Yarrowia lipolytica CLIB122]
Length = 823
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 19 THSGGGGRANT-----PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFI 73
THS GG ++ PSR LW+G L L F +G +ES ++ FI
Sbjct: 296 THSSLGGPPHSQYEEEKPSRSLWLGKLPPTATPQALHHIFSAYGTVESARILTHKNCGFI 355
Query: 74 NFKIEEDAIASMKALQG---FPLAGNPLRIEFAK 104
NF + A+ +++ L G FP AG P R+ FAK
Sbjct: 356 NFADSQSALHALQQLNGKEFFPGAG-PCRVGFAK 388
>gi|409082590|gb|EKM82948.1| hypothetical protein AGABI1DRAFT_104752 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1296
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ A + F +G +ES ++ FINF+ +DA+ + KAL G
Sbjct: 579 PTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKALNG 638
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ +RI FAK
Sbjct: 639 RDVLGSDVGAIRIGFAKV 656
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
P+R LW+GNL ++ L F +G +ES+ P + F+NF + DA+
Sbjct: 455 PTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAL 506
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
+ T P R L+VG+L NI E L F FG++E++ + GRS Y F+ F+ +
Sbjct: 249 KGQTGPMR-LYVGSLLFNITEEMLKGIFEPFGKIENIQLIMDPETGRSKGYGFLTFRNAD 307
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA +++ L GF LAG P+++
Sbjct: 308 DAKKALEQLNGFELAGRPMKV 328
>gi|345563952|gb|EGX46935.1| hypothetical protein AOL_s00097g361 [Arthrobotrys oligospora ATCC
24927]
Length = 546
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 5/98 (5%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP- 66
E+ R R E H+ T P L+VGN+ +I E L F FG+LE V Q
Sbjct: 242 EKNRQARAEGGQHNRDEDHRRTIPFHRLYVGNIHFSITENELQQVFAPFGDLEFVQLQKE 301
Query: 67 ----GRSYAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
R Y F+ ++ +A +++ + GF L G +R+
Sbjct: 302 ESGRSRGYGFVQYRDPNNAKEALERMNGFDLGGRLIRV 339
>gi|347965861|ref|XP_003435825.1| AGAP001419-PC [Anopheles gambiae str. PEST]
gi|333470322|gb|EGK97589.1| AGAP001419-PC [Anopheles gambiae str. PEST]
Length = 532
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ + E L + F +FG +E V + + YAF++F+ ++A+ +MK L G +
Sbjct: 346 LYVRNLTQDTSEEKLKESFEQFGRVERV--KKIKDYAFVHFEDRDNAVKAMKDLDGKEVG 403
Query: 95 GNPLRIEFAK 104
G+ + + AK
Sbjct: 404 GSNIEVSLAK 413
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 232 EKNRAAAMANNLQKGTAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 285
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 286 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 324
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 204 EKNRAAALANNLQKGTAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 257
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF LAG P+++
Sbjct: 258 SETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKV 296
>gi|407927556|gb|EKG20446.1| hypothetical protein MPH_02256 [Macrophomina phaseolina MS6]
Length = 485
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
+VGNL+ +++L F FG + FQ R +AFI E+A ++ L G+ +
Sbjct: 308 CYVGNLTPYTTQSDLVPLFQNFGYVVETRFQSDRGFAFIKMDTHENAAMAICQLNGYNVN 367
Query: 95 GNPLRIEFAK 104
G PL+ + K
Sbjct: 368 GRPLKCSWGK 377
>gi|391347173|ref|XP_003747839.1| PREDICTED: putative RNA-binding protein 15B-like [Metaseiulus
occidentalis]
Length = 620
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 13 GRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAF 72
G+F+ + G G+A P+ +WVG L + +L +F RFG + V F G S+A+
Sbjct: 254 GKFQCKI---GYGKAT--PTTRIWVGGLGNWTSLGHLEREFDRFGAIRKVDFVKGESHAY 308
Query: 73 INFKIEEDAIASMKALQGFPLAG--NPLRIEFA 103
I + + A A+ + ++GF L G LR++FA
Sbjct: 309 IQYDSIDAAQAACQEMRGFALGGPDKRLRLDFA 341
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ---PGR--SYAFINF 75
+R L+VGNL I EA L F R+G +E + + PG+ +YAFI F
Sbjct: 187 TRTLFVGNLEVTISEAELRRLFERYGVVEDIDVKRPPPGQGNAYAFIKF 235
>gi|349580766|dbj|GAA25925.1| K7_Nop13p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 403
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS ++ + L F G++ + F+ + +AFI+FK EE
Sbjct: 233 SKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEG 292
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
+ ++K +AG PLR+E+ +
Sbjct: 293 STNALKDKSCRKIAGRPLRMEYGE 316
>gi|225713086|gb|ACO12389.1| U1 small nuclear ribonucleoprotein A [Lepeophtheirus salmonis]
Length = 217
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQ----FLRFGE-LESVAFQP--GRSYAFINFKIEEDAIA 83
PS +++ NL+ +++ +L F +FG+ LE VA + R AF+ FK A
Sbjct: 5 PSHTIYINNLNEKVKKEDLKKSLYAIFSQFGQILEIVALKTLKMRGQAFVIFKEITSATN 64
Query: 84 SMKALQGFPLAGNPLRIEFAKA 105
+M+++QGFP P+RI F+K
Sbjct: 65 AMRSMQGFPFYDKPMRIAFSKT 86
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-SYAFINFKIEEDAIASMKAL 88
PP++ L++ NL E L+ F +F + V P R AF+ F+ E + A+ ++L
Sbjct: 140 PPNQILFLTNLPDETNEMMLSMLFNQFPGFKEVRLVPNRHDIAFVEFENEVQSAAARESL 199
Query: 89 QGFPLAGN-PLRIEFAK 104
QGF + N ++I FAK
Sbjct: 200 QGFKITPNASMKISFAK 216
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
+++T P R L+VG+L NI E L F FG+++ + + GRS Y FI + +
Sbjct: 347 KSHTGPMR-LYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYGFITYHNAD 405
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA +++ L GF LAG P+++
Sbjct: 406 DAKKALEQLNGFELAGRPMKV 426
>gi|330443708|ref|NP_014224.2| Nop13p [Saccharomyces cerevisiae S288c]
gi|347595682|sp|P53883.2|NOP13_YEAST RecName: Full=Nucleolar protein 13
gi|151944364|gb|EDN62642.1| nucleolar protein [Saccharomyces cerevisiae YJM789]
gi|190409156|gb|EDV12421.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|323331909|gb|EGA73321.1| Nop13p [Saccharomyces cerevisiae AWRI796]
gi|329138963|tpg|DAA10376.2| TPA: Nop13p [Saccharomyces cerevisiae S288c]
gi|392296819|gb|EIW07920.1| Nop13p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 403
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS ++ + L F G++ + F+ + +AFI+FK EE
Sbjct: 233 SKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEG 292
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
+ ++K +AG PLR+E+ +
Sbjct: 293 STNALKDKSCRKIAGRPLRMEYGE 316
>gi|442620149|ref|NP_001262778.1| syncrip, isoform K [Drosophila melanogaster]
gi|440217679|gb|AGB96158.1| syncrip, isoform K [Drosophila melanogaster]
Length = 753
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ ++ E L +QF ++G++E V + + YAFI+F+ + A+ +M+ L G +
Sbjct: 376 LYVRNLTQDVSEDKLKEQFEQYGKVERV--KKIKDYAFIHFEDRDSAVEAMRGLNGKEIG 433
Query: 95 GNPLRIEFAK 104
+ + + AK
Sbjct: 434 ASNIEVSLAK 443
>gi|260833612|ref|XP_002611806.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
gi|229297178|gb|EEN67815.1| hypothetical protein BRAFLDRAFT_141671 [Branchiostoma floridae]
Length = 175
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR--SYAFINFKIEEDAIASMKALQGFP 92
++VGNL + + ++ D F ++G++ V + GR +AF+ F+ + DA ++ G+
Sbjct: 8 IYVGNLPPEVRQEDIKDVFYKYGKIIHVDLKIGRGPPFAFVEFEDKRDADDAVYGRDGYT 67
Query: 93 LAGNPLRIEFAK 104
L G LR+EF +
Sbjct: 68 LDGYRLRVEFPR 79
>gi|393220498|gb|EJD05984.1| hypothetical protein FOMMEDRAFT_119427 [Fomitiporia mediterranea
MF3/22]
Length = 1316
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ A + F +G +ES ++ FINF+ +DA+ + KAL G
Sbjct: 577 PTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKALNG 636
Query: 91 FPLAGN---PLRIEFAK 104
+ G+ +RI FAK
Sbjct: 637 RDVLGSDVGAIRIGFAK 653
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
R LW+GNL ++ L F +G +ES+ P + F+NF +EDAI
Sbjct: 453 RSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQEDAI 502
>gi|324504723|gb|ADY42035.1| Heterogeneous nuclear ribonucleoprotein R [Ascaris suum]
Length = 619
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
+ L+V NL + E L + F GE+E + R YAFI+FK E A+ +M+AL G
Sbjct: 376 KVLYVRNLKEAVTEEQLKEMFAAHGEVERA--KKIRDYAFIHFKEREPALKAMEALNGTV 433
Query: 93 LAGNPLRIEFAK 104
L G + I AK
Sbjct: 434 LEGIAIEISLAK 445
>gi|7022076|dbj|BAA91479.1| unnamed protein product [Homo sapiens]
Length = 427
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS +I EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
+ L G L+I+ AK
Sbjct: 67 KCISVLNKTKWKGGTLQIQLAK 88
>gi|390354454|ref|XP_791429.3| PREDICTED: uncharacterized protein LOC586560 [Strongylocentrotus
purpuratus]
Length = 365
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 39/76 (51%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMK 86
+N + LW+GNL + E L D F +GE+ S+ + AF+N+K A +M
Sbjct: 188 SNPENLKSLWIGNLQPTVTEKELKDLFKPYGEVSSMRRMSEKFCAFVNYKDPRMASKAMD 247
Query: 87 ALQGFPLAGNPLRIEF 102
LQG L G L I+F
Sbjct: 248 KLQGRELHGKFLLIKF 263
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAI 82
+ P+ L+VG +S+N +E +L+D F ++G++ + GRS + F+ + E+A
Sbjct: 40 STPNTKLFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEAS 99
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
++++AL G L G + + FA
Sbjct: 100 SAIQALDGQDLYGRRVGVNFAN 121
>gi|20975278|dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKAL 88
L+VG LS + EE NL F ++G++ V Q R + F+ F+ EDA +M+A+
Sbjct: 9 LFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPEDAKDAMEAM 68
Query: 89 QGFPLAGNPLRIEFA 103
G + G +R++ A
Sbjct: 69 NGKSVDGRQIRVDQA 83
>gi|380487237|emb|CCF38170.1| hypothetical protein CH063_09326 [Colletotrichum higginsianum]
Length = 206
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 31 PSRHL-WVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
PS H+ +V N S +++ +LT+ F ++GE+ V+ P ++Y F+ FK E ++A+++ +
Sbjct: 97 PSEHVVFVQNYSFDVKPDDLTEAFSKYGEVVGVSMPPKKTYCFVYFKDLESSVAAVENVN 156
Query: 90 G 90
G
Sbjct: 157 G 157
>gi|357631525|gb|EHJ78995.1| hypothetical protein KGM_15683 [Danaus plexippus]
Length = 249
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 22 GGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ--PGRSYAFINFKIEE 79
G GG N ++VGNL +I ++ D F +FG++ V + G +AF+ F+
Sbjct: 4 GSGGSRN---ECRIYVGNLPPDIRTKDIQDLFYKFGKVTFVDLKNRKGPPFAFVEFEDPR 60
Query: 80 DAIASMKALQGFPLAGNPLRIEF 102
DA +++A G+ G LR+EF
Sbjct: 61 DADDAVRARDGYDYDGYRLRVEF 83
>gi|238879474|gb|EEQ43112.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 399
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIE 78
G + +PPS L++GNLS N NL + F +G + S Q + + ++ F
Sbjct: 262 GDSQSPPSDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSV 321
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
++A A+++A+ G + G P R++F+
Sbjct: 322 DEAKAALEAMNGEYIEGRPCRLDFS 346
>gi|68473894|ref|XP_719050.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|68474099|ref|XP_718946.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440741|gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440849|gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIE 78
G + +PPS L++GNLS N NL + F +G + S Q + + ++ F
Sbjct: 262 GDSQSPPSDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSV 321
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
++A A+++A+ G + G P R++F+
Sbjct: 322 DEAKAALEAMNGEYIEGRPCRLDFS 346
>gi|256270769|gb|EEU05930.1| Nop13p [Saccharomyces cerevisiae JAY291]
Length = 403
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS ++ + L F G++ + F+ + +AFI+FK EE
Sbjct: 233 SKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEG 292
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
+ ++K +AG PLR+E+ +
Sbjct: 293 STNALKDKSCRKIAGRPLRMEYGE 316
>gi|170087476|ref|XP_001874961.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650161|gb|EDR14402.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1160
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ A + F +G +ES ++ FINF+ +DA+ + KAL G
Sbjct: 515 PTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKALNG 574
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ +RI FAK
Sbjct: 575 RDVLGSDVGAIRIGFAKV 592
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
P+R LW+GNL + L F +G +ES+ P + F+NF + DAI
Sbjct: 390 PTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAI 441
>gi|392896831|ref|NP_001255142.1| Protein RSP-8, isoform a [Caenorhabditis elegans]
gi|3874499|emb|CAB07322.1| Protein RSP-8, isoform a [Caenorhabditis elegans]
Length = 309
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF---QP---GRSYAFINFKIEE 79
R N PS+ L V NLS E +L D F FGE+ +P R + FI F + E
Sbjct: 69 RENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIE 128
Query: 80 DAIASMKALQGFPLAGNPLRIEFA 103
DA A+ L L G+ +R++F+
Sbjct: 129 DATAARDKLCNTDLDGHKIRVDFS 152
>gi|66816589|ref|XP_642304.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74997199|sp|Q54Y98.1|TRA2_DICDI RecName: Full=Transformer-2 protein homolog
gi|60470367|gb|EAL68347.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 326
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 7/84 (8%)
Query: 27 ANT-PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
ANT PS L V L+ EE +L D+F RFG+++ V + GRS + F+ F+ +E
Sbjct: 106 ANTASPSNVLGVFGLAPQTEERDLKDEFSRFGKIDHVDLIMDRKTGRSKCFGFVYFENKE 165
Query: 80 DAIASMKALQGFPLAGNPLRIEFA 103
DA+ + + Q L G +R +F+
Sbjct: 166 DAVRAKEECQDLQLHGKSIRTDFS 189
>gi|357614246|gb|EHJ68984.1| hypothetical protein KGM_20249 [Danaus plexippus]
Length = 260
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ I E L ++F R+G +E V + + YAF++F+ + A+ +M+ + G L
Sbjct: 84 LYVRNLTQEITEEALKEEFERYGNVERV--KKIKDYAFVHFEDRDCAVKAMQEIDGKELG 141
Query: 95 GNPLRIEFAK 104
G L + AK
Sbjct: 142 GARLEVSLAK 151
>gi|168043399|ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674440|gb|EDQ60948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 240
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL ++ E + D F ++G + + + P R Y F+ F+ DA +++
Sbjct: 6 SRTIYVGNLPGDVREREIEDIFYKYGRIVDIDLKLPPRPPGYCFLEFEDARDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ GN LR+E A
Sbjct: 66 DGYNFDGNRLRVEIA 80
>gi|402225652|gb|EJU05713.1| hypothetical protein DACRYDRAFT_20114 [Dacryopinax sp. DJM-731 SS1]
Length = 1322
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 24/120 (20%)
Query: 9 RFRGGRFEDRTHSGG--------GGRANTP---------PSRHLWVGNLSHNIEEANLTD 51
RF + E T +G G R+ +P PSR LW+GNL +I L +
Sbjct: 425 RFPDSQLETPTRTGSLLSVPLSSGSRSVSPKTAEGNNQTPSRSLWIGNLDSHITGQVLAN 484
Query: 52 QFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL---QG--FPLAGN--PLRIEFAK 104
F ++G +ES + F+NF DAI + + + QG P GN P+RI F K
Sbjct: 485 AFTKYGPIESFRMLAEKECGFVNFVDISDAIRAKEDVLETQGGVIPSLGNSQPVRIGFGK 544
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 20 HSGGGGRAN--TPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKI 77
S GG A + P+R LW+G++ A + F FG +ES ++ F+NF+
Sbjct: 574 QSAGGMEAQLQSSPTRALWIGSIPSTTTPATILSIFSPFGPIESARVLTHKNCGFVNFER 633
Query: 78 EEDAIASMKALQGFPLAG---NPLRIEFAKA 105
+DA+ + KAL G + G +RI FA+
Sbjct: 634 LDDAVCARKALNGRDVLGPDVGAIRIGFARV 664
>gi|366995343|ref|XP_003677435.1| hypothetical protein NCAS_0G01950 [Naumovozyma castellii CBS 4309]
gi|342303304|emb|CCC71082.1| hypothetical protein NCAS_0G01950 [Naumovozyma castellii CBS 4309]
Length = 404
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS + + L F GE+ + FQ + +AFI+F+ EE
Sbjct: 232 SKNPPSRILFVGNLSFDTTDELLKKHFQHCGEIVKIRMATFQDSGKCKGFAFIDFRSEEG 291
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
A ++K +A P+R+E+ +
Sbjct: 292 ATNALKDKTCRKIAARPIRMEYGE 315
>gi|299753873|ref|XP_002911923.1| pumilio/RRM domain-containing protein [Coprinopsis cinerea
okayama7#130]
gi|298410502|gb|EFI28429.1| pumilio/RRM domain-containing protein [Coprinopsis cinerea
okayama7#130]
Length = 1304
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ A + F +G +ES ++ FINF+ +DA+ + KAL G
Sbjct: 586 PTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKALNG 645
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ +RI FAK
Sbjct: 646 RDVLGSDVGAIRIGFAKV 663
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P+R LW+GNL ++ L F +G +ES+ P + F+NF + DAI + + +
Sbjct: 463 PTRSLWIGNLDSSVTSEQLIHIFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKEDVLN 522
Query: 90 ------GFPLAGNPLRIEFAKA 105
G P G +RI F KA
Sbjct: 523 RLGGNIGMP-NGQTVRIGFGKA 543
>gi|320167853|gb|EFW44752.1| SNF [Capsaspora owczarzaki ATCC 30864]
Length = 262
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 27 ANTPPSRHLWVGNLSHNIEE----ANLTDQFLRFGE-LESVAFQP--GRSYAFINFKIEE 79
++ PPS+ L+V NL+ +++ A L F +FG L+ VA + R AFI F
Sbjct: 17 SSIPPSQTLYVNNLNEKLKKEELRAALYTIFTQFGPVLDIVALKTLKMRGQAFIVFHDIT 76
Query: 80 DAIASMKALQGFPLAGNPLRIEFAKA 105
+ ++++LQGF G P+RI FAK+
Sbjct: 77 SSANALRSLQGFSFYGKPMRITFAKS 102
>gi|425778638|gb|EKV16756.1| RNA binding protein Rnp24, putative [Penicillium digitatum PHI26]
gi|425784156|gb|EKV21949.1| RNA binding protein Rnp24, putative [Penicillium digitatum Pd1]
Length = 370
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 11 RGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQ-- 65
R + E + +S G ++ PPS+ ++VGNLS ++ + NL + F + G + +V FQ
Sbjct: 163 RPEKSETQENSAGAAKSGHPPSKRIFVGNLSFDVTKENLEENFGKCGTVTNVHMATFQDT 222
Query: 66 -PGRSYAFINFKIEEDAIASMKALQGFPL 93
+ YA++ F ED A+ A++GF L
Sbjct: 223 GKCKGYAWVEF---EDLAAAEAAVRGFML 248
>gi|365758792|gb|EHN00619.1| Nop13p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 400
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS ++ + L F G++ + F+ + +AFI+FK EE
Sbjct: 230 SKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDVVKIRMATFEDSGKCKGFAFIDFKNEEG 289
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
+ ++K +AG PLR+E+ +
Sbjct: 290 STNALKDKSCRKIAGRPLRMEYGE 313
>gi|326433216|gb|EGD78786.1| hypothetical protein PTSG_01762 [Salpingoeca sp. ATCC 50818]
Length = 462
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 30 PPSRHLWVGNLSHNIEEANL----TDQFLRFGE-LESVAFQP--GRSYAFINFKIEEDAI 82
P + +++ NL+ ++E L T F +FG+ L+ VA + R AF+ F + A
Sbjct: 171 PENNTIYINNLNEKVKEDELKKALTAVFKQFGKILQIVAMKSYYRRGQAFVVFDSVDSAK 230
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
A++ A+QGFP G P+RI FAK
Sbjct: 231 AAISAMQGFPFVGKPMRINFAK 252
>gi|225713170|gb|ACO12431.1| Splicing factor, arginine/serine-rich 4 [Lepeophtheirus salmonis]
Length = 129
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L++GN+S + E ++ F +G+L VA + G Y F+ F+ DA +++ L G +
Sbjct: 8 LYLGNISDDTRERDVEKFFKGYGKLREVALKNG--YGFVEFEDHRDADDAVQDLDGKDMN 65
Query: 95 GNPLRIEFAKA 105
G+ +R+EFA++
Sbjct: 66 GSRVRVEFARS 76
>gi|427776791|gb|JAA53847.1| Putative spenito [Rhipicephalus pulchellus]
Length = 608
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G PS +WVG L + L +F RFG + + + G S+A+I F + A ++
Sbjct: 304 GYGKATPSTRIWVGGLGSWTSMSVLEREFDRFGLIRKIEYVKGDSHAYIQFDSIDAATSA 363
Query: 85 MKALQGFPLAG--NPLRIEFA 103
+ ++G PL G LR++FA
Sbjct: 364 CQQMRGAPLGGADKRLRVDFA 384
>gi|326679167|ref|XP_003201252.1| PREDICTED: msx2-interacting protein [Danio rerio]
Length = 3426
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 43/79 (54%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + P+ +W+ LS +I E LT F R+G + V F + A I + E A A+
Sbjct: 507 GFGKSMPTTCVWLDGLSSSITEQYLTRHFCRYGHVVKVVFDRLKGMALILYNNIEYAQAA 566
Query: 85 MKALQGFPLAGNPLRIEFA 103
+K +G+ + GN ++++FA
Sbjct: 567 VKETKGWKIGGNKIKVDFA 585
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSY-----AFINF 75
+RHLWVGNL N+ E + + F R+G +ESV P R AF++F
Sbjct: 5 TRHLWVGNLPENVREEKIIEHFKRYGRVESVKVLPKRGSEGGVAAFVDF 53
>gi|157132620|ref|XP_001656100.1| heterogeneous nuclear ribonucleoprotein r [Aedes aegypti]
gi|108881674|gb|EAT45899.1| AAEL002879-PA, partial [Aedes aegypti]
Length = 517
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ + E L + F +FG++E V + + YAFI+F+ + A+ +MK L G L
Sbjct: 308 LYVRNLTQDTSEEKLKESFEQFGKVERV--KKIKDYAFIHFEDRDHAVNAMKELDGKDLG 365
Query: 95 GNPLRIEFAK 104
G+ L + AK
Sbjct: 366 GSNLEVSLAK 375
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI E L F FG +ES+ + GRS Y FI F E A +++ L
Sbjct: 251 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 310
Query: 89 QGFPLAGNPLRI 100
GF LAG P+++
Sbjct: 311 NGFELAGRPMKV 322
>gi|389749221|gb|EIM90398.1| hypothetical protein STEHIDRAFT_119406 [Stereum hirsutum FP-91666
SS1]
Length = 1317
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ A + F +G +ES ++ FINF+ +DA+ + KAL G
Sbjct: 578 PTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFINFERLDDAVRARKALNG 637
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ +RI FAK
Sbjct: 638 RDVLGSDVGAIRIGFAKV 655
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P+R LW+GNL ++ L F +G +ES+ P + F+NF + DA+ + + +
Sbjct: 453 PTRSLWIGNLDSSVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQGDAVRAKEDVLN 512
Query: 90 ------GFPLAGNPLRIEFAKA 105
G P G +RI F KA
Sbjct: 513 RLGGNIGMP-NGQTVRIGFGKA 533
>gi|346471403|gb|AEO35546.1| hypothetical protein [Amblyomma maculatum]
Length = 271
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKI 77
G R N SR L V LS +E +L + F ++G LE V Q GRS +AF+ F+
Sbjct: 116 GSRDNPNTSRCLGVFGLSLYTQERDLKEVFSKYGPLEDVQVVYDAQSGRSRGFAFVYFET 175
Query: 78 EEDAIASMKALQGFPLAGNPLRIEFA 103
EDA A+ G + G +R++++
Sbjct: 176 VEDAKAAKDRCNGLEIDGRKIRVDYS 201
>gi|427782489|gb|JAA56696.1| Putative splicing factor proline- and glutamine-rich [Rhipicephalus
pulchellus]
Length = 473
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 21 SGGGGRANTPPSR-----HLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINF 75
SG RA P + L+VGNL +N E F +GE+ + + + F+
Sbjct: 64 SGLETRATVEPKKFTGRCRLFVGNLPNNFTEEQFRKLFEDYGEVAEIFLNTAKGFGFVKL 123
Query: 76 KIEEDAIASMKALQGFPLAGNPLRIEFA 103
++A A+ AL P+ PLR+ FA
Sbjct: 124 DTRQNAEAAKAALDFMPMQQKPLRVRFA 151
>gi|255077010|ref|XP_002502160.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
gi|226517425|gb|ACO63418.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
Length = 465
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF---QPG--RSYAFINFKIEEDA 81
A++ P + L+VG LS++++EA L +F RFG ++SV Q G R YAF+ F E D
Sbjct: 163 ADSDPYKTLFVGRLSYDVDEAALRREFERFGAVKSVTVVEDQDGKPRGYAFVEFDRESDM 222
Query: 82 IASMKALQGFPLAGNPLRIE 101
+ ++ G L G + ++
Sbjct: 223 KHAYRSADGLRLEGRRILVD 242
>gi|387193898|gb|AFJ68729.1| rna binding motif protein 39b, partial [Nannochloropsis gaditana
CCMP526]
Length = 456
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINFKI 77
GG + N +++GNL NI E +L D FGE++ +A + +AF F
Sbjct: 182 GGRKRNVGQPNKVFLGNLHPNITEEDLMDLLKPFGEVQGLALAKNEEGVSKGFAFATFSK 241
Query: 78 EEDAIASMKALQGFPLAGNPLRI 100
E+A M L G PLA P+++
Sbjct: 242 VEEAQTVMTQLGGVPLADRPIKV 264
>gi|115474019|ref|NP_001060608.1| Os07g0673500 [Oryza sativa Japonica Group]
gi|113612144|dbj|BAF22522.1| Os07g0673500 [Oryza sativa Japonica Group]
Length = 296
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D F ++G + + + P R +AF+ F+ DA +++
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ GN LR+E A
Sbjct: 66 DGYNFDGNRLRVELA 80
>gi|33146854|dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
Length = 362
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D F ++G + + + P R +AF+ F+ DA +++
Sbjct: 72 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGR 131
Query: 89 QGFPLAGNPLRIEFA 103
G+ GN LR+E A
Sbjct: 132 DGYNFDGNRLRVELA 146
>gi|42521942|ref|NP_967322.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|39574472|emb|CAE77976.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
Length = 104
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMK 86
+ ++VGNLS+N+++ L F FG ++SV GRS +AF+ + +A A++
Sbjct: 3 KKIYVGNLSYNVDQDQLGGLFADFGTVDSVNIITDRDTGRSKGFAFVEMSSDSEATAAID 62
Query: 87 ALQGFPLAGNPLRIEFAK 104
L G L G + I AK
Sbjct: 63 KLNGMDLGGRAMNISEAK 80
>gi|403221223|dbj|BAM39356.1| splicing factor [Theileria orientalis strain Shintoku]
Length = 334
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-----SYAFINFKIE 78
GG+AN PS ++VGNL ++ ++ D F +FGE++ + + G+ SYAFI+F
Sbjct: 5 GGKANRSPS-CVFVGNLPEKVDNRDIHDLFDKFGEIKDIDIKHGKTTNYTSYAFIDFASV 63
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
A ++ + G+ LR+EFA
Sbjct: 64 RSAEDAVDSRDGYEYDRYKLRVEFA 88
>gi|91080449|ref|XP_969323.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270005570|gb|EFA02018.1| hypothetical protein TcasGA2_TC007641 [Tribolium castaneum]
Length = 185
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESV--AFQPGRSYAFINFKIEEDAIASMKALQ 89
S ++VG L+ ++++ +L +F ++G+L SV AF P +AFI F DA ++ +L
Sbjct: 8 SARVYVGGLTDSVKKEDLETEFEKYGKLNSVWVAFNPP-GFAFIEFINHSDAESACDSLN 66
Query: 90 GFPLAGNPLRIEFAK 104
G G+ LR+E A+
Sbjct: 67 GTDFLGSKLRVEIAR 81
>gi|89266789|emb|CAJ83546.1| spen homolog, transcriptional regulator (Drosophila) [Xenopus
(Silurana) tropicalis]
Length = 292
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-----SYAFINFKIEEDAIASMK 86
+RHLWVGNL N+ + + + F R+G +ESV P R AF++F D ++ K
Sbjct: 5 TRHLWVGNLPENVRDEKIIEHFKRYGRVESVKILPKRGSDGGVAAFVDFV---DIKSAQK 61
Query: 87 ALQGFPLAGN-PLRIEF 102
A G+ LR ++
Sbjct: 62 AHNAVNKMGDRDLRTDY 78
>gi|407044727|gb|EKE42787.1| enhancer binding protein-2, putative [Entamoeba nuttalli P19]
Length = 229
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSY----AFINFKIEEDAIASMKALQG 90
L++GNLS+ E NL F FG+++ R Y AF+ ++ EEDA ++ A G
Sbjct: 4 LYIGNLSYKTTEENLKTHFESFGKIKEAKLMIFRGYSRGFAFVEYETEEDAKKAV-AANG 62
Query: 91 FPLAGNPLRIEFAK 104
G L++E A+
Sbjct: 63 VEFEGRKLKVEIAR 76
>gi|302800509|ref|XP_002982012.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
gi|300150454|gb|EFJ17105.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
Length = 398
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 29 TPPS----RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA 81
TPP R L+VG L + +L D F +GE+ES+ P R+ AFI + EDA
Sbjct: 216 TPPDDTTVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDA 272
>gi|195575469|ref|XP_002077600.1| GD23006 [Drosophila simulans]
gi|194189609|gb|EDX03185.1| GD23006 [Drosophila simulans]
Length = 1098
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+ +W+ + + E+ L QF RFG + V+ + A + + ++A A++K ++G
Sbjct: 731 PTNCVWIDGVGEKVPESFLQSQFTRFGTVTKVSIDRSKQLALVLYDQVQNAQAAVKDMRG 790
Query: 91 FPLAGNPLRIEFA 103
L G L+++FA
Sbjct: 791 TILRGRKLQVDFA 803
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--QPGRSYAFINFKIEEDAIASMKALQ 89
+R L++GNL +I + L F FGE+ + Q +YAF + + +M+ +
Sbjct: 654 TRTLFIGNLEKDITASELRGHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMD 713
Query: 90 GFPLAGNPLRIEFAKA 105
G L N +++ F K+
Sbjct: 714 GEHLGSNRIKLGFGKS 729
>gi|317008639|gb|ADU79247.1| GH13679p [Drosophila melanogaster]
Length = 202
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ ++ E L +QF ++G++E V + + YAFI+F+ + A+ +M+ L G +
Sbjct: 7 LYVRNLTQDVSEDKLKEQFEQYGKVERV--KKIKDYAFIHFEDRDSAVEAMRGLNGKEIG 64
Query: 95 GNPLRIEFAK 104
+ + + AK
Sbjct: 65 ASNIEVSLAK 74
>gi|326490421|dbj|BAJ84874.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326522680|dbj|BAJ88386.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 286
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D F ++G + + + P R +AF+ F+ DA +++
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ GN LR+E A
Sbjct: 66 DGYNFDGNRLRVELA 80
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKA 87
+L++GNLS N++E LT +F FGEL+ V GRS + ++ F+ EDA +++A
Sbjct: 246 NLFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVEFENAEDAAKALEA 305
Query: 88 LQGFPLAGNPLRIEFA 103
G L +R++F+
Sbjct: 306 KNGAELDNRAIRLDFS 321
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS------YAFINFKIEEDAIAS 84
PS+ L+VGNLS + E + + F G + + R + ++ ++A A+
Sbjct: 349 PSQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESGAPKGFGYVEMGSIDEAKAA 408
Query: 85 MKALQGFPLAGNPLRIEFA 103
+ALQG L G P+R++++
Sbjct: 409 YEALQGADLGGRPMRLDYS 427
>gi|348518317|ref|XP_003446678.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q isoform 2
[Oreochromis niloticus]
Length = 594
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL++ + E L F FG+LE V + + YAFI+F+ + A+ +++ + G L
Sbjct: 305 LFVRNLANGVTEELLEKSFSEFGKLERV--KKLKDYAFIHFEERDGAVKALEEMNGKELE 362
Query: 95 GNPLRIEFAK 104
G P+ I FAK
Sbjct: 363 GEPIEIVFAK 372
>gi|167537765|ref|XP_001750550.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770971|gb|EDQ84646.1| predicted protein [Monosiga brevicollis MX1]
Length = 345
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQ----FLRFGELESVAFQPG---RSYAFINFKIEEDAIA 83
P++ L++ NLS ++E L F +FG++ V R AF+ F E A
Sbjct: 95 PNQTLYINNLSERVKEDELKKALEAIFNQFGKILRVVAMSSFKRRGQAFVVFDSIEAAEK 154
Query: 84 SMKALQGFPLAGNPLRIEFAK 104
++ A+Q FP G P+RI FAK
Sbjct: 155 ALNAMQSFPFCGKPMRINFAK 175
>gi|168048203|ref|XP_001776557.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672148|gb|EDQ58690.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASM 85
+R L+VGNL N+ E L F FG +E V + G+S Y F+ + EDA A+
Sbjct: 71 ARRLYVGNLHFNMTEDQLRQVFEPFGPVELVQLPSDIETGQSKGYGFVQYARLEDARAAQ 130
Query: 86 KALQGFPLAGNPLRI 100
+ L G LAG P+++
Sbjct: 131 QNLNGLELAGRPIKV 145
>gi|300794930|ref|NP_001178142.1| nucleolar protein 8 [Bos taurus]
gi|296484481|tpg|DAA26596.1| TPA: nucleolar protein 8 [Bos taurus]
Length = 1160
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKIEE-DAIA 83
+ L+VG L NI EA+L +QF RFGE+ V P + +A+IN ++ E D
Sbjct: 8 KRLFVGGLGQNISEADLQNQFGRFGEVSDVEIITRKDDQGNPQKVFAYINIRVTEADLKK 67
Query: 84 SMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 68 CMSVLNKTKWKGGTLQIQLAK 88
>gi|348670466|gb|EGZ10288.1| hypothetical protein PHYSODRAFT_361940 [Phytophthora sojae]
Length = 409
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S L+VGNL + + + ++ +F +FG +E A + G YAF++++ EDA +++ +
Sbjct: 20 STKLYVGNLFYELTQRDVEAEFGKFGPIEQCAVKKG--YAFVHYEQLEDAELAVQEMNDK 77
Query: 92 PLAGNPLRIEFA 103
L G LR+ FA
Sbjct: 78 ELGGRRLRVAFA 89
>gi|195496994|ref|XP_002095913.1| GE25369 [Drosophila yakuba]
gi|194182014|gb|EDW95625.1| GE25369 [Drosophila yakuba]
Length = 418
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA-IASMKALQGFPL 93
L+VGNL I E L DQF +FGE+ S+A P + AF+ + A +A+ + +
Sbjct: 234 LYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKLVI 293
Query: 94 AGNPLRIEFAKA 105
G + I++A +
Sbjct: 294 QGRKVSIKWAHS 305
>gi|440900965|gb|ELR51984.1| Nucleolar protein 8 [Bos grunniens mutus]
Length = 1161
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKIEE-DAIA 83
+ L+VG L NI EA+L +QF RFGE+ V P + +A+IN ++ E D
Sbjct: 8 KRLFVGGLGQNISEADLQNQFGRFGEVSDVEIITRKDDQGNPQKVFAYINIRVTEADLKK 67
Query: 84 SMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 68 CMSVLNKTKWKGGTLQIQLAK 88
>gi|302306417|ref|NP_982813.2| ABL134Cp [Ashbya gossypii ATCC 10895]
gi|299788506|gb|AAS50637.2| ABL134Cp [Ashbya gossypii ATCC 10895]
gi|374106015|gb|AEY94925.1| FABL134Cp [Ashbya gossypii FDAG1]
Length = 375
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS + + L F GE+ + FQ + +AF++F+ E
Sbjct: 210 SKNPPSRILFVGNLSFDTTDELLKKHFQHCGEIVKIRMATFQDSGKCKGFAFVDFRDEAG 269
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
A A++ +AG PLR+E+ +
Sbjct: 270 ATAALTDRSCRAIAGRPLRMEYGE 293
>gi|453085373|gb|EMF13416.1| hypothetical protein SEPMUDRAFT_148719 [Mycosphaerella populorum
SO2202]
Length = 1179
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+GN+ + ++L F +FG +E +S F+NF+ + AI++ A G
Sbjct: 470 PTRSLWLGNIPSSTTVSSLNVIFSQFGPIEFARVLTHKSCGFVNFENLQSAISAKIACNG 529
Query: 91 ---FPLAGNPLRIEFAK 104
FP G P+RI FAK
Sbjct: 530 KEIFPGCG-PVRIGFAK 545
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 14/96 (14%)
Query: 21 SGGGGRA----NTP--PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF-------QPG 67
S GG RA +TP PS L++GNLS + + N+ + F ++GE+ SV QP
Sbjct: 243 SNGGDRAKKFGDTPSEPSETLFLGNLSFDADRDNIYEVFSKYGEIISVRIPTHPETEQP- 301
Query: 68 RSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFA 103
+ + ++ + E A ++ ALQG + P+R++F+
Sbjct: 302 KGFGYVQYGDVESAKKALDALQGEYINNRPVRLDFS 337
>gi|327291115|ref|XP_003230267.1| PREDICTED: methenyltetrahydrofolate synthase domain-containing
protein-like, partial [Anolis carolinensis]
Length = 368
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 35 LWVGNLSHNIEEANLTDQFL-RFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPL 93
++VGN+SH I + L + R + +Q GR AF+ + + A A+++ALQG L
Sbjct: 295 VYVGNISHGIRVSELKEALRERHASPMRLTWQGGRHQAFLIYNNQCTADAAIEALQGLSL 354
Query: 94 AGNPLRIEFAK 104
G+PLR+E A+
Sbjct: 355 KGHPLRVEPAR 365
>gi|46362505|gb|AAH66570.1| Synaptotagmin binding, cytoplasmic RNA interacting protein, like
[Danio rerio]
Length = 560
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ + E L F +FG+LE V + + YAFI+F+ + A+ ++ L G L
Sbjct: 341 LFVRNLASTVTEELLEKTFCQFGKLERV--KKLKDYAFIHFEERDGAVKALAELHGKDLE 398
Query: 95 GNPLRIEFAK 104
G P+ I FAK
Sbjct: 399 GEPIEIVFAK 408
>gi|302690898|ref|XP_003035128.1| hypothetical protein SCHCODRAFT_65804 [Schizophyllum commune H4-8]
gi|300108824|gb|EFJ00226.1| hypothetical protein SCHCODRAFT_65804 [Schizophyllum commune H4-8]
Length = 1161
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 5 GGRERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF 64
GG+ R + E ++ +A TP +R LW+GNL + L F +G +ES+
Sbjct: 305 GGQNRSVSPKSEPQSQ-----QAQTP-TRSLWIGNLDSAVTSEQLIHHFAPYGAIESLRL 358
Query: 65 QPGRSYAFINFKIEEDAI 82
P + F+NF + DAI
Sbjct: 359 LPEKECGFVNFVDQADAI 376
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ A + F +G +ES ++ F+NF+ +DA+ + KAL G
Sbjct: 448 PTRALWIGSIPSTTTPATILSVFSPYGPIESARVLTHKNCGFVNFERLDDAVRARKALNG 507
Query: 91 FPLAGN---PLRIEFAKA 105
+ G+ +RI FAK
Sbjct: 508 RDVLGSDVGAIRIGFAKV 525
>gi|290973281|ref|XP_002669377.1| hypothetical protein NAEGRDRAFT_82154 [Naegleria gruberi]
gi|284082924|gb|EFC36633.1| hypothetical protein NAEGRDRAFT_82154 [Naegleria gruberi]
Length = 1039
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 31 PSRHLWVGNLSHNI--EEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL 88
P+RHLWVG HN+ + + + F +FG+++S+ + AF+NF + +DA+ + K L
Sbjct: 923 PTRHLWVGRF-HNMKMDYSTIYSDFEKFGQIDSLNLLRDQKCAFVNFALVKDAVRAKKEL 981
Query: 89 QG 90
+G
Sbjct: 982 EG 983
>gi|167376798|ref|XP_001734154.1| 29 kDa ribonucleoprotein B, chloroplast precursor [Entamoeba dispar
SAW760]
gi|165904519|gb|EDR29735.1| 29 kDa ribonucleoprotein B, chloroplast precursor, putative
[Entamoeba dispar SAW760]
Length = 229
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSY----AFINFKIEEDAIASMKALQG 90
L++GNLS+ E NL F FG+++ R Y AF+ ++ EEDA ++ A G
Sbjct: 4 LYIGNLSYKTTEENLKTHFESFGKIKEAKLMVFRGYSRGFAFVEYETEEDAKKAV-AANG 62
Query: 91 FPLAGNPLRIEFAK 104
G L++E A+
Sbjct: 63 VEFEGRKLKVEIAR 76
>gi|119569012|gb|EAW48627.1| synaptotagmin binding, cytoplasmic RNA interacting protein, isoform
CRA_e [Homo sapiens]
Length = 588
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
+R L+V NL++ + E L F +FG+LE V + + YAFI+F + A+ +M+ + G
Sbjct: 302 ARLLFVRNLANTVTEEILEKAFSQFGKLERV--KKLKDYAFIHFDERDGAVKAMEEMNGK 359
Query: 92 PLAGNPLRIEFAK 104
L G + I FAK
Sbjct: 360 DLEGENIEIVFAK 372
>gi|302837077|ref|XP_002950098.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
gi|300264571|gb|EFJ48766.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
Length = 1079
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF---------QPGRSYAFINFKIEED 80
P + +L+VGNL+ ++E L +F RFG + SV + GR+ F+ F +D
Sbjct: 219 PFTTNLYVGNLAPEVDEEVLKIEFGRFGAIASVKVMWPRDEEQRRKGRNCGFVAFMRRDD 278
Query: 81 AIASMKALQGFPLAGNPLRIEFAKA 105
A +M+ L G L GN L I + KA
Sbjct: 279 AETAMRKLNGITLHGNELHIGWGKA 303
>gi|320581035|gb|EFW95257.1| polyadenylate-binding protein [Ogataea parapolymorpha DL-1]
Length = 541
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG-----RSYAFINFKIEEDAIASMKAL 88
+L+V N ++ + L F ++G++ESV G R YAFINFK EDA+ + + L
Sbjct: 189 NLYVKNFPDDLTKEKLAQVFGQYGDVESVFLPQGTGNHNRGYAFINFKSHEDAVRAQENL 248
Query: 89 QGFPLAGNPLRIEFAKA 105
GF +A R++ KA
Sbjct: 249 DGFEIAPG-YRLQLGKA 264
>gi|1302151|emb|CAA96066.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 403
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS ++ + L F G++ + F+ + +AFI+FK EE
Sbjct: 233 SKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEG 292
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
+ +K +AG PLR+E+ +
Sbjct: 293 STNELKDKSCRKIAGRPLRMEYGE 316
>gi|358340304|dbj|GAA48227.1| U1 small nuclear ribonucleoprotein A [Clonorchis sinensis]
Length = 314
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR-SYAFINFKIEEDAIASMK 86
+ PP++ L++ NL + +EA L+ F +F V PGR AF+ F E +A A+
Sbjct: 235 DQPPNKILFLTNLPEDSDEAMLSMLFNQFSGYREVRMVPGRHDIAFVEFGNEIEAGAAKH 294
Query: 87 ALQGFPL-AGNPLRIEFAK 104
LQGF + G P+RI FAK
Sbjct: 295 GLQGFNIRPGRPIRITFAK 313
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 31 PSRHLWVGNLSHNIE----EANLTDQFLRFGELESVAFQ---PGRSYAFINFKIEEDAIA 83
P+ L++ NL+ I+ + +L F++FG++ + R AF+ F A
Sbjct: 50 PNNTLYIRNLNEKIKRDELKKSLYAVFVQFGQILDIITSRTLKMRGQAFVVFDDVNSATT 109
Query: 84 SMKALQGFPLAGNPLRIEFAK 104
+++A+Q FPL P+RIEFAK
Sbjct: 110 ALRAMQSFPLYEKPMRIEFAK 130
>gi|74006873|ref|XP_863171.1| PREDICTED: uncharacterized protein LOC609457 isoform 2 [Canis lupus
familiaris]
Length = 162
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKAL 88
L+VG L+ N +E L D F FG + V Q R + FI F E A +M+A+
Sbjct: 8 LFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMRAM 67
Query: 89 QGFPLAGNPLRIEFA 103
G L G +R++ A
Sbjct: 68 NGESLDGRQIRVDHA 82
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
+ N P R L+VG+L NI E L F FG+++ + + RS Y FI F E
Sbjct: 254 KGNIGPMR-LYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITFHDSE 312
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA +++ L GF LAG P+++
Sbjct: 313 DAKKALEQLNGFELAGRPMKV 333
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 22 GGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA 81
GG N P + ++VGNL N+ + +L F ++GEL V G+ F+ F A
Sbjct: 263 GGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSA 322
Query: 82 IASMKALQGFPLAGNPLRIEFAKA 105
+++ L G L G +R+ + ++
Sbjct: 323 EEALRVLNGTLLGGQNVRLSWGRS 346
Score = 36.2 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 19 THSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQF-LRFGELESVAFQPGRS------YA 71
T S G R + P ++VG+L+ ++ + +LT+ F R+ ++ R+ Y
Sbjct: 153 TFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYG 212
Query: 72 FINFKIEEDAIASMKALQGFPLAGNPLRI 100
F+ F E + + +M +QG + P+RI
Sbjct: 213 FVRFADESEQMRAMTEMQGVLCSTRPMRI 241
>gi|301114008|ref|XP_002998774.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112075|gb|EEY70127.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 392
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S L+VGNL + + + ++ +F +FG +E A + G YAF++++ EDA +++ +
Sbjct: 8 STKLYVGNLFYELTQRDVEAEFGKFGPIEQCAVKKG--YAFVHYEQLEDAELAVQEMNDK 65
Query: 92 PLAGNPLRIEFA 103
L G LR+ FA
Sbjct: 66 ELGGRRLRVAFA 77
>gi|215741122|dbj|BAG97617.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D F ++G + + + P R +AF+ F+ DA +++
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ GN LR+E A
Sbjct: 66 DGYNFDGNRLRVELA 80
>gi|88602838|ref|YP_503016.1| RNA recognition motif-containing protein [Methanospirillum hungatei
JF-1]
gi|88188300|gb|ABD41297.1| RNA-binding region RNP-1 (RNA recognition motif) [Methanospirillum
hungatei JF-1]
Length = 184
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R L+VGNL+++++E L F R+GE+ V G+ Y F+ + EDA A+ AL
Sbjct: 4 RRLFVGNLTYSVDEKQLWGLFSRYGEVVGVRVIEGKGYGFVEMESYEDARAARNALNETE 63
Query: 93 LAGNPLRIE 101
G L I+
Sbjct: 64 FQGRNLLID 72
>gi|357466551|ref|XP_003603560.1| RNA-binding protein [Medicago truncatula]
gi|355492608|gb|AES73811.1| RNA-binding protein [Medicago truncatula]
Length = 414
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQF--LRFGELESVAFQPGRSYAFINFKIEEDAIASM 85
N P ++VGNL H++ +A L QF L G LE V Q G+ + F+ + E+A ++
Sbjct: 236 NNPSYTTVYVGNLPHDVTQAELHCQFHALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAI 295
Query: 86 KALQGFPLAGNPLR 99
+ G P+ G ++
Sbjct: 296 QMANGRPVRGKTMK 309
>gi|255564164|ref|XP_002523079.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
gi|223537641|gb|EEF39264.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
Length = 292
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR L+VGNL +I E + D F ++G + + + P R YAF+ F+ DA +++
Sbjct: 6 SRTLYVGNLPGDIREREVEDLFYKYGPIAHIDLKIPPRPPGYAFVEFEEARDAEDAIRGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ G+ LR+E A
Sbjct: 66 DGYDFDGHQLRVELA 80
>gi|194898376|ref|XP_001978788.1| GG11763 [Drosophila erecta]
gi|190650491|gb|EDV47746.1| GG11763 [Drosophila erecta]
Length = 418
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA-IASMKALQGFPL 93
L+VGNL I E L DQF +FGE+ S+A P + AF+ + A +A+ + +
Sbjct: 234 LYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKLVI 293
Query: 94 AGNPLRIEFAKA 105
G + I++A +
Sbjct: 294 QGRKVSIKWAHS 305
>gi|443896055|dbj|GAC73399.1| transcriptional coactivator CAPER [Pseudozyma antarctica T-34]
Length = 662
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF--QPG----RSYAFINFKIEEDAIASMKAL 88
L+VG+L ++ + N+ F FGE+E V +PG + + FI FK +DA + +A+
Sbjct: 416 LYVGSLHFSLTDENVKAVFEPFGEIEYVDLHREPGTGKSKGFCFIQFKHADDARKAHEAM 475
Query: 89 QGFPLAGNPLRI 100
GF LAG +R+
Sbjct: 476 NGFELAGRAIRV 487
>gi|47680305|gb|AAT37136.1| arginine/serine-rich splicing factor 2 [Zea mays]
gi|47680373|gb|AAT37127.1| arginine/serine-rich splicing factor 2 [Zea mays]
Length = 239
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R ++VGNL ++ + L F R+G +E + + G YAF+ F+ E D +++AL G+P
Sbjct: 2 RPVFVGNLDYDTRHSELDRLFYRYGRVERIDIKSG--YAFVYFEDERDGNDAIRALDGYP 59
Query: 93 L 93
Sbjct: 60 F 60
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 3/84 (3%)
Query: 21 SGGGGRANTPPSRHLWVGNLS-HNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEE 79
G ANT P+R L+V N N +++ F FG + SV + +++AF+ F+ E
Sbjct: 81 DGNKPEANTKPTRTLFVINFDPMNTRVSDIERHFTPFGNISSVRIR--KNFAFVQFETME 138
Query: 80 DAIASMKALQGFPLAGNPLRIEFA 103
+A +++A L + +E+A
Sbjct: 139 EARKALEATHATTLLDRVISVEYA 162
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 22 GGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA 81
GG N P + ++VGNL N+ + +L F ++GEL V G+ F+ F A
Sbjct: 263 GGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSA 322
Query: 82 IASMKALQGFPLAGNPLRIEFAKA 105
+++ L G L G +R+ + ++
Sbjct: 323 EEALRVLNGTLLGGQNVRLSWGRS 346
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 7/89 (7%)
Query: 19 THSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQF-LRFGELESVAFQPGRS------YA 71
T S G R + P ++VG+L+ ++ + +LT+ F R+ ++ R+ Y
Sbjct: 153 TFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYG 212
Query: 72 FINFKIEEDAIASMKALQGFPLAGNPLRI 100
F+ F E + + +M +QG + P+RI
Sbjct: 213 FVRFADESEQMRAMTEMQGVLCSTRPMRI 241
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 22 GGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA 81
GG N P + ++VGNL N+ + +L F ++GEL V G+ F+ F A
Sbjct: 261 GGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSA 320
Query: 82 IASMKALQGFPLAGNPLRIEFAKA 105
+++ L G L G +R+ + ++
Sbjct: 321 EEALRVLNGTLLGGQNVRLSWGRS 344
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 19 THSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQF-LRFGELESVAF----QPGRS--YA 71
T S G R + P ++VG+L+ ++ + +LT+ F R+ ++ GRS Y
Sbjct: 151 TFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYNSVKGAKVVIDRNTGRSKGYG 210
Query: 72 FINFKIEEDAIASMKALQGFPLAGNPLRI 100
F+ F E + + +M +QG + P+RI
Sbjct: 211 FVRFADESEQMRAMTEMQGVLCSTRPMRI 239
>gi|344292751|ref|XP_003418089.1| PREDICTED: putative RNA-binding protein 3-like [Loxodonta africana]
Length = 154
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKAL 88
L+VG L+ N +E L D F FG + V Q R + FI F E A +M+A+
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 89 QGFPLAGNPLRIEFA 103
G L G +R++ A
Sbjct: 68 NGESLDGRQIRVDHA 82
>gi|218200241|gb|EEC82668.1| hypothetical protein OsI_27298 [Oryza sativa Indica Group]
Length = 321
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDA 81
GR + SR ++VGNL +I E + D F ++G + + + P R +AF+ F+ DA
Sbjct: 65 GRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDA 124
Query: 82 IASMKALQGFPLAGNPLRIEFA 103
+++ G+ GN LR+E A
Sbjct: 125 EDAIRGRDGYNFDGNRLRVELA 146
>gi|41054427|ref|NP_955973.1| synaptotagmin binding, cytoplasmic RNA interacting protein, like
[Danio rerio]
gi|28422490|gb|AAH46902.1| Synaptotagmin binding, cytoplasmic RNA interacting protein, like
[Danio rerio]
Length = 560
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ + E L F +FG+LE V + + YAFI+F+ + A+ ++ L G L
Sbjct: 341 LFVRNLASTVTEELLEKTFCQFGKLERV--KKLKDYAFIHFEERDGAVKALAELHGKDLE 398
Query: 95 GNPLRIEFAK 104
G P+ I FAK
Sbjct: 399 GEPIEIVFAK 408
>gi|158292616|ref|XP_314009.4| AGAP005127-PA [Anopheles gambiae str. PEST]
gi|157017075|gb|EAA09465.4| AGAP005127-PA [Anopheles gambiae str. PEST]
Length = 790
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G G+A P+ +WVG L L +F RFG ++ + + G + AFI + + A
Sbjct: 378 GYGKAT--PTTRIWVGGLGAWTSVTQLEREFDRFGAIKKIEYAKGDTQAFILYDSIDAAT 435
Query: 83 ASMKALQGFPLAGNP--LRIEFA 103
A++K ++GF L G +RI+FA
Sbjct: 436 AAVKEMRGFALGGPDRRIRIDFA 458
>gi|312370863|gb|EFR19173.1| hypothetical protein AND_22952 [Anopheles darlingi]
Length = 259
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMK 86
R +++G LS + + +TD F+ FG+L + Q R +AFI F+ EDA A++
Sbjct: 6 RTVYIGGLSEEVTDKLITDAFIPFGDLVDIQMPIDYESQKHRGFAFIEFENAEDAAAAVD 65
Query: 87 ALQGFPLAGNPLRIEFAK 104
+ L G +R+ A+
Sbjct: 66 NMNDSELCGRTIRVNTAR 83
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV------AFQPGRSYAFINFKIEEDA 81
N + L+VG+L H++ ++ L D F + G++ SV A Q Y ++NF DA
Sbjct: 19 NQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDA 78
Query: 82 IASMKALQGFPLAGNPLRIEFA 103
+M L PL P+RI ++
Sbjct: 79 AKAMDVLNFTPLNNKPIRIMYS 100
>gi|388858649|emb|CCF48487.1| related to Transformer-2 protein homolog [Ustilago hordei]
Length = 346
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 10 FRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELE--SVAFQP- 66
R G EDR++ GG + P +L V LS+ + +L D F ++G +E V + P
Sbjct: 53 MRTGDNEDRSNRGGRDAGDNNPGNNLHVSGLSNRTTDRDLEDAFGKYGAIERAQVMYDPH 112
Query: 67 ---GRSYAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
R +AF+ F EDA A++ A+ G G + ++ A+
Sbjct: 113 SREPRGFAFVTFVKAEDAEAAITAMNGTEFLGRKITVDKAR 153
>gi|357466549|ref|XP_003603559.1| RNA-binding protein [Medicago truncatula]
gi|355492607|gb|AES73810.1| RNA-binding protein [Medicago truncatula]
Length = 440
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQF--LRFGELESVAFQPGRSYAFINFKIEEDAIASM 85
N P ++VGNL H++ +A L QF L G LE V Q G+ + F+ + E+A ++
Sbjct: 262 NNPSYTTVYVGNLPHDVTQAELHCQFHALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAI 321
Query: 86 KALQGFPLAGNPLR 99
+ G P+ G ++
Sbjct: 322 QMANGRPVRGKTMK 335
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Query: 28 NTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV------AFQPGRSYAFINFKIEEDA 81
N + L+VG+L H++ ++ L D F + G++ SV A Q Y ++NF DA
Sbjct: 19 NQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDA 78
Query: 82 IASMKALQGFPLAGNPLRIEFA 103
+M L PL P+RI ++
Sbjct: 79 AKAMDVLNFTPLNNKPIRIMYS 100
>gi|291244499|ref|XP_002742134.1| PREDICTED: OTT-MAL-like [Saccoglossus kowalevskii]
Length = 810
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+ LWVG L A L +F RFG + + + G ++A+I++ + + A+ ++G
Sbjct: 335 PTTRLWVGGLGPWTSLAVLEREFDRFGAIRKIDYIKGDNHAYISYDSLDASQAACSQMRG 394
Query: 91 FPLAGNP--LRIEFA 103
FPL G LR++FA
Sbjct: 395 FPLGGPDRRLRVDFA 409
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-----PGRSYAFINFKIEEDAIASMK 86
+R L+VGNL + E+ L F RFG +E V + G +YAF+ F + A +
Sbjct: 255 TRTLFVGNLEAAVAESELRRVFDRFGIVEDVDVKRPMRGQGNAYAFVKFLNLDMAHKAKV 314
Query: 87 ALQGFPLAGNPLRIEFAK 104
A+ G L N +I + K
Sbjct: 315 AMSGQYLGRNICKIGYGK 332
>gi|307198209|gb|EFN79224.1| Putative RNA-binding protein 16 [Harpegnathos saltator]
Length = 1633
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
S LWVG+LS + + L+D F FG++ S+ P R AFI +DA ++ L+
Sbjct: 547 STTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLIPPRGCAFICMNRRQDAYRALTKLKNH 606
Query: 92 PLAGNPLRIEFA 103
+ G + + +A
Sbjct: 607 KMQGKAITLAWA 618
>gi|226498478|ref|NP_001144860.1| uncharacterized protein LOC100277950 [Zea mays]
gi|195648000|gb|ACG43468.1| hypothetical protein [Zea mays]
Length = 254
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 22 GGGGRAN-TPPSRHLWVGNLSHNIE----EANLTDQFLRFGE-LESVAFQP--GRSYAFI 73
GG G AN PP+ +++ NL+ I+ + +LT F +FG+ L+ +AF+ + A++
Sbjct: 10 GGEGEANGIPPNVTIYINNLNEKIKLEELKKSLTAVFSQFGKILDVLAFKTLKHKGQAWV 69
Query: 74 NFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
F+ A ++K +QGFP +RI++AK
Sbjct: 70 VFEDVASATEALKRMQGFPFYDKTMRIQYAKT 101
>gi|323338729|gb|EGA79945.1| Ngr1p [Saccharomyces cerevisiae Vin13]
Length = 594
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + ++VG L E L F FG + +V G++ F+ F+ DA AS++ LQ
Sbjct: 357 PTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQ 416
Query: 90 GFPLAGNPLRIEFAK 104
GF + G+P+R+ + +
Sbjct: 417 GFIVGGSPIRLSWGR 431
>gi|225684437|gb|EEH22721.1| U2 small nuclear ribonucleoprotein B [Paracoccidioides brasiliensis
Pb03]
Length = 1484
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-YAFINFKIEEDAIASMKAL 88
PP++ L++ + ++++ LT F RF + V PGR AF+ ++ E AI++ +A
Sbjct: 1406 PPNKILFLREIPDSLDQDGLTAVFGRFEGFKEVRMVPGRKGIAFVEYEAETGAISAKEAT 1465
Query: 89 QGFPLAGN--PLRIEFAK 104
G PL N P+R+ + +
Sbjct: 1466 SGMPLGENGMPIRVTYQR 1483
>gi|224034387|gb|ACN36269.1| unknown [Zea mays]
gi|413944623|gb|AFW77272.1| hypothetical protein ZEAMMB73_456532 [Zea mays]
Length = 254
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 22 GGGGRAN-TPPSRHLWVGNLSHNIE----EANLTDQFLRFGE-LESVAFQP--GRSYAFI 73
GG G AN PP+ +++ NL+ I+ + +LT F +FG+ L+ +AF+ + A++
Sbjct: 10 GGEGEANGIPPNVTIYINNLNEKIKLEELKKSLTAVFSQFGKILDVLAFKTLKHKGQAWV 69
Query: 74 NFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
F+ A ++K +QGFP +RI++AK
Sbjct: 70 VFEDVASATEALKRMQGFPFYDKTMRIQYAKT 101
>gi|358341755|dbj|GAA49350.1| RNA-binding protein 15 [Clonorchis sinensis]
Length = 762
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G L I + FG E + + G++YA + F E A+ + AL+G
Sbjct: 330 PTRCLWIGGLGPWITYPEFANLLEEFGPTEKIIWPSGKNYAHVLFHSVELAVTAADALRG 389
Query: 91 FPLAGNPLRI 100
+PL G RI
Sbjct: 390 YPLGGVARRI 399
>gi|323349799|gb|EGA84014.1| Ngr1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 593
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + ++VG L E L F FG + +V G++ F+ F+ DA AS++ LQ
Sbjct: 356 PTNTTVFVGGLVPKTTEFQLRSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQ 415
Query: 90 GFPLAGNPLRIEFAK 104
GF + G+P+R+ + +
Sbjct: 416 GFIVGGSPIRLSWGR 430
>gi|28573264|ref|NP_649440.3| CG14641 [Drosophila melanogaster]
gi|16769690|gb|AAL29064.1| LD46870p [Drosophila melanogaster]
gi|28381138|gb|AAF52166.2| CG14641 [Drosophila melanogaster]
gi|220956458|gb|ACL90772.1| CG14641-PA [synthetic construct]
Length = 418
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA-IASMKALQGFPL 93
L+VGNL I E L DQF +FGE+ S+A P + AF+ + A +A+ + +
Sbjct: 234 LYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKLVI 293
Query: 94 AGNPLRIEFAKA 105
G + I++A +
Sbjct: 294 QGRKVSIKWAHS 305
>gi|296214508|ref|XP_002753659.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Callithrix
jacchus]
Length = 439
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 243 EKNRLAAMANNLQKGTGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 296
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +M L GF LAG P+R+
Sbjct: 297 SDTGRSKGYGFITFSDSECARRAMDQLNGFELAGRPMRV 335
>gi|195343343|ref|XP_002038257.1| GM10722 [Drosophila sechellia]
gi|195568111|ref|XP_002102061.1| GD19696 [Drosophila simulans]
gi|194133278|gb|EDW54794.1| GM10722 [Drosophila sechellia]
gi|194197988|gb|EDX11564.1| GD19696 [Drosophila simulans]
Length = 418
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA-IASMKALQGFPL 93
L+VGNL I E L DQF +FGE+ S+A P + AF+ + A +A+ + +
Sbjct: 234 LYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKLVI 293
Query: 94 AGNPLRIEFAKA 105
G + I++A +
Sbjct: 294 QGRKVSIKWAHS 305
>gi|453087889|gb|EMF15930.1| RRM_1-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 486
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VGNL+ + +L F FG + FQ R +AFI E+A ++ L G+ +
Sbjct: 301 VYVGNLTPYTTQNDLVPLFQNFGYVTETRFQSDRGFAFIKMDTHENAANAICQLSGYQVN 360
Query: 95 GNPLRIEFAK 104
G PL+ + K
Sbjct: 361 GRPLKCSWGK 370
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI E L F FG+++++ GRS Y FI F +DA +++ L
Sbjct: 305 LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDTDTGRSKGYGFITFHNADDAKKALEQL 364
Query: 89 QGFPLAGNPLRI 100
GF LAG P+++
Sbjct: 365 NGFELAGRPMKV 376
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
++VGNL N+ E L FL+FGE+ V GR F+ F A +++ +QG +
Sbjct: 234 IFVGNLDPNVTEEELRPIFLQFGEIVYVKIPVGRGCGFVQFATRASAEEAIQRMQGHVIG 293
Query: 95 GNPLRIEFAK 104
P+RI + +
Sbjct: 294 QQPVRISWGR 303
>gi|238578169|ref|XP_002388626.1| hypothetical protein MPER_12329 [Moniliophthora perniciosa FA553]
gi|215450078|gb|EEB89556.1| hypothetical protein MPER_12329 [Moniliophthora perniciosa FA553]
Length = 529
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ- 89
P+R LW+GNL + L F +G +ES+ P + F+NF + DAI + +
Sbjct: 121 PTRSLWIGNLDSAVTSEQLIHVFAPYGAIESLRLLPEKECGFVNFVDQADAIRAKDDVLN 180
Query: 90 ------GFPLAGNPLRIEFAKA 105
G P G +RI F KA
Sbjct: 181 RLGGNIGMP-NGQTVRIGFGKA 201
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 19 THSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIE 78
T G + + P+R LW+G++ A + + F +G +ES +++ NF+
Sbjct: 234 TSGGMDAQLQSTPTRALWIGSIPSTTTPATILNVFSPYGPIESARVLTHKNF---NFERL 290
Query: 79 EDAIASMKALQGFPLAGN---PLRIEFAKA 105
+DA+ + KAL G + G+ +RI FAK
Sbjct: 291 DDAVRARKALNGRDVLGSDVGAIRIGFAKV 320
>gi|302808802|ref|XP_002986095.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
gi|300146243|gb|EFJ12914.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
Length = 366
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 29 TPPS----RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA 81
TPP R L+VG L + +L D F +GE+ES+ P R+ AFI + EDA
Sbjct: 216 TPPDDTTVRTLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDA 272
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L +NI E L F FG ++++ + GRS Y F+ ++ EDA +++ L
Sbjct: 240 LYVGSLHYNITEEMLRGIFEPFGHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKALEHL 299
Query: 89 QGFPLAGNPLRI 100
GF +AG P+++
Sbjct: 300 NGFEIAGRPMKV 311
>gi|410075471|ref|XP_003955318.1| hypothetical protein KAFR_0A07490 [Kazachstania africana CBS 2517]
gi|372461900|emb|CCF56183.1| hypothetical protein KAFR_0A07490 [Kazachstania africana CBS 2517]
Length = 381
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS + + L F GE+ + FQ + +AF++FK EE
Sbjct: 217 SKNPPSRILFVGNLSFDTTDEVLKKHFQHCGEIIKIRMATFQDSGKCKGFAFVDFKSEEG 276
Query: 81 AIASMKALQGFPLAGNPLRIEFAK 104
A ++K +A P+R+E+ +
Sbjct: 277 ATNALKDKTCRRIASRPIRMEYGE 300
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 15/89 (16%)
Query: 27 ANTPPS---------RHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YA 71
A+TPP L+VG+L NI E L F FG+++++ GRS Y
Sbjct: 272 ASTPPQPPPKVTSGPMRLYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYG 331
Query: 72 FINFKIEEDAIASMKALQGFPLAGNPLRI 100
FI F +DA +++ L GF LAG P+++
Sbjct: 332 FITFHNADDAKKALEQLNGFELAGRPMKV 360
>gi|266618701|pdb|3IWN|C Chain C, Co-Crystal Structure Of A Bacterial C-Di-Gmp Riboswitch
gi|266618702|pdb|3IWN|D Chain D, Co-Crystal Structure Of A Bacterial C-Di-Gmp Riboswitch
Length = 91
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQ----FLRFGELESVAFQ---PGRSYAFINFKIEEDA 81
T P+ +++ NL+ I++ L F RFG++ + R AF+ FK A
Sbjct: 1 TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSA 60
Query: 82 IASMKALQGFPLAGNPLRIEFAKA 105
+++++QGFP P+RI++AK
Sbjct: 61 TNALRSMQGFPFYDKPMRIQYAKT 84
>gi|126031306|pdb|2NZ4|A Chain A, Structural Investigation Of The Glms Ribozyme Bound To Its
Catalytic Cofactor
gi|126031309|pdb|2NZ4|B Chain B, Structural Investigation Of The Glms Ribozyme Bound To Its
Catalytic Cofactor
gi|126031312|pdb|2NZ4|C Chain C, Structural Investigation Of The Glms Ribozyme Bound To Its
Catalytic Cofactor
gi|126031315|pdb|2NZ4|D Chain D, Structural Investigation Of The Glms Ribozyme Bound To Its
Catalytic Cofactor
Length = 94
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQ----FLRFGELESVAFQ---PGRSYAFINFKIEEDA 81
T P+ +++ NL+ I++ L F RFG++ + R AF+ FK A
Sbjct: 2 TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSA 61
Query: 82 IASMKALQGFPLAGNPLRIEFAKA 105
+++++QGFP P+RI++AK
Sbjct: 62 TNALRSMQGFPFYDKPMRIQYAKT 85
>gi|328700850|ref|XP_001952161.2| PREDICTED: putative RNA-binding protein 15-like [Acyrthosiphon
pisum]
Length = 750
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + PS+ +WVG L A L +F RFG ++ + F A+I F+ + A A+
Sbjct: 385 GYGKSIPSQRIWVGGLGPWTSLAQLEQEFDRFGVIKKIEFVKSDICAYIQFECIDAATAA 444
Query: 85 MKALQGFPLAG--NPLRIEFAKA 105
+ ++G L G + LR ++AK+
Sbjct: 445 VNEMRGVSLGGPEHKLRTDYAKS 467
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 10/85 (11%)
Query: 28 NTP--PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF-------QPGRSYAFINFKIE 78
+TP PS L++GNLS N NL++ F +G + SV QP + + ++ +
Sbjct: 331 DTPSAPSDTLFLGNLSFNANRDNLSEVFSEYGSIVSVRIPTHPDTEQP-KGFGYVQYGSV 389
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
++A A+++AL G + G P+R++F+
Sbjct: 390 DEAKAALEALNGEYIEGRPVRLDFS 414
>gi|403294563|ref|XP_003938247.1| PREDICTED: nucleolar protein 8-like [Saimiri boliviensis
boliviensis]
Length = 1170
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS +I EA+L +QF RFG++ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQDISEADLQNQFSRFGDVSDVDIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQP-----GRSYAFINF 75
+ G + N+ L+VGN+ +I E +L F FGEL V Q R Y F+ +
Sbjct: 300 NANGAQQNSVLFHRLYVGNIHFSITEPDLRTVFGPFGELRFVQLQKEDNGRSRGYGFVEY 359
Query: 76 KIEEDAIASMKALQGFPLAGNPLRI 100
+A +++ + GF LAG P+R+
Sbjct: 360 NDPANAREALEKMNGFDLAGRPIRV 384
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-- 65
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 228 EKNRPAAMANNLQKGSGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 281
Query: 66 --PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 282 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 320
>gi|356526497|ref|XP_003531854.1| PREDICTED: uncharacterized protein LOC100818300 [Glycine max]
Length = 245
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIAS 84
S L+VG +S++ ++ +L + F R+GE+ V + GRS + FI F EDA ++
Sbjct: 38 SSAKLFVGGISYSTDDMSLRESFARYGEVIDVKVIMDRETGRSRGFGFITFATSEDASSA 97
Query: 85 MKALQGFPLAGNPLRIEFA 103
++ + G L G +R+ +A
Sbjct: 98 IQGMDGQDLHGRRIRVNYA 116
>gi|395501464|ref|XP_003755115.1| PREDICTED: APOBEC1 complementation factor [Sarcophilus harrisii]
Length = 593
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 35 LWVGNLSHNIEEANLTDQF--LRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
L+V NL + E + +F ++ G +E V + R YAF++F EDA+ +MKAL G
Sbjct: 233 LYVRNLMLSTSEETIEKEFDSIKPGSVERV--KKIRDYAFVHFNNREDAVNAMKALNGKV 290
Query: 93 LAGNPLRIEFAK 104
L G+P+ + AK
Sbjct: 291 LDGSPIEVTLAK 302
>gi|363740921|ref|XP_001232393.2| PREDICTED: THO complex subunit 4 [Gallus gallus]
Length = 255
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Query: 2 GRGGGRER----FRGGRF-----EDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQ 52
RGGGR R R + D SG G A L V NL + +A++ +
Sbjct: 64 ARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDADIQEL 123
Query: 53 FLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
F FG L+ A RS A ++F+ + DA+ +MK G PL G P+ I+ +
Sbjct: 124 FAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 181
>gi|170059381|ref|XP_001865339.1| pre-mRNA-splicing factor RBM22 [Culex quinquefasciatus]
gi|167878167|gb|EDS41550.1| pre-mRNA-splicing factor RBM22 [Culex quinquefasciatus]
Length = 428
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDA-IASMKALQGFPL 93
L+VGNL +I E ++ D F +GE+ SV+ P + AF+ + A +A+ K L
Sbjct: 235 LYVGNLGEHITEVDIRDNFYHYGEIRSVSLVPRQQCAFVQYTKRSAAELAAEKTFNKLVL 294
Query: 94 AGNPLRIEFAKA 105
G L I++A +
Sbjct: 295 GGKKLTIKWAHS 306
>gi|169599154|ref|XP_001793000.1| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
gi|160704547|gb|EAT90605.2| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
Length = 544
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQ-----PGRS--YAFINFKIEEDAIASMKA 87
L+VGN+ ++ E +L F FGELE V Q P RS Y F+ F A ++
Sbjct: 252 LYVGNIHFSVTEQDLHTIFAPFGELEQVTLQRDETNPARSKGYGFVQFVDPTKAKEALAE 311
Query: 88 LQGFPLAGNPLRI 100
+ GF LAG +R+
Sbjct: 312 MNGFELAGRQIRV 324
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R GG G P R L+VG+L NI E L F FG++E +
Sbjct: 245 EKNRAAAMASMLQRGGAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMD 298
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI+F E A +++ L GF LAG P+++
Sbjct: 299 SETGRSKGYGFISFADAECAKKALEQLNGFELAGRPMKV 337
>gi|147898399|ref|NP_001089314.1| THO complex subunit 4-A [Xenopus laevis]
gi|82230182|sp|Q58EA2.1|THO4A_XENLA RecName: Full=THO complex subunit 4-A; Short=Tho4-A; AltName:
Full=Aly/REF export factor-A
gi|61403478|gb|AAH92013.1| MGC84954 protein [Xenopus laevis]
Length = 256
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQ 89
L V NL + +A++ + F FG L+ A RS A ++F+ + DA+ +MK
Sbjct: 108 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 167
Query: 90 GFPLAGNPLRIEFAKA 105
G PL G P+ I+ +
Sbjct: 168 GVPLDGRPMNIQLVTS 183
>gi|62857865|ref|NP_001017027.1| THO complex subunit 4 [Xenopus (Silurana) tropicalis]
gi|123915952|sp|Q28FB9.1|THOC4_XENTR RecName: Full=THO complex subunit 4; Short=Tho4; AltName:
Full=Aly/REF export factor
gi|89269092|emb|CAJ81934.1| THO complex 4 [Xenopus (Silurana) tropicalis]
gi|138519928|gb|AAI35843.1| hypothetical protein LOC549781 [Xenopus (Silurana) tropicalis]
Length = 260
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQ 89
L V NL + +A++ + F FG L+ A RS A ++F+ + DA+ +MK
Sbjct: 111 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 170
Query: 90 GFPLAGNPLRIEFAKA 105
G PL G P+ I+ +
Sbjct: 171 GVPLDGRPMNIQLVTS 186
>gi|325094271|gb|EGC47581.1| pumilio domain-containing protein c [Ajellomyces capsulatus H88]
Length = 1206
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 5 GGRERFRGGR-FEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVA 63
GG + R G+ D T+ G P+R LW+G++ + +L F +G++ES
Sbjct: 450 GGMQSLRQGQEILDETNLDG-------PTRALWIGSIPVSTTVTSLDAIFNVYGKIESTR 502
Query: 64 FQPGRSYAFINFKIEEDAIASMKALQG---FPLAGNPLRIEFAKA 105
++ F+NF+ E AI + L G FP AG P+RI +AK
Sbjct: 503 VLTHKNCGFVNFERVESAIQAKSLLNGKEIFPGAG-PVRIGYAKV 546
>gi|350538663|ref|NP_001232343.1| THO complex subunit 4 [Taeniopygia guttata]
gi|197127307|gb|ACH43805.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 17 DRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YA 71
D SG G A L V NL + +A++ + F FG L+ A RS A
Sbjct: 87 DLFDSGFGAGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTA 146
Query: 72 FINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
++F+ + DA+ +MK G PL G P+ I+ +
Sbjct: 147 DVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 180
>gi|22219383|pdb|1M5K|C Chain C, Crystal Structure Of A Hairpin Ribozyme In The
Catalytically-Active Conformation
gi|22219386|pdb|1M5K|F Chain F, Crystal Structure Of A Hairpin Ribozyme In The
Catalytically-Active Conformation
gi|24987694|pdb|1M5O|C Chain C, Transition State Stabilization By A Catalytic Rna
gi|24987697|pdb|1M5O|F Chain F, Transition State Stabilization By A Catalytic Rna
gi|24987701|pdb|1M5P|C Chain C, Transition State Stabilization By A Catalytic Rna
gi|24987705|pdb|1M5P|F Chain F, Transition State Stabilization By A Catalytic Rna
gi|24987712|pdb|1M5V|C Chain C, Transition State Stabilization By A Catalytic Rna
gi|24987713|pdb|1M5V|F Chain F, Transition State Stabilization By A Catalytic Rna
gi|49259013|pdb|1SJ3|P Chain P, Hepatitis Delta Virus Gemonic Ribozyme Precursor, With
Mg2+ Bound
gi|49259015|pdb|1SJ4|P Chain P, Crystal Structure Of A C75u Mutant Hepatitis Delta Virus
Ribozyme Precursor, In Cu2+ Solution
gi|49259033|pdb|1SJF|A Chain A, Crystal Structure Of The Hepatitis Delta Virus Gemonic
Ribozyme Precursor, With C75u Mutaion, In Cobalt
Hexammine Solution
gi|49259520|pdb|1VBX|A Chain A, Crystal Structure Of The Hepatitis Delta Virus Gemonic
Ribozyme Precursor, With C75u Mutaion, In Edta Solution
gi|49259522|pdb|1VBY|A Chain A, Crystal Structure Of The Hepatitis Delta Virus Gemonic
Ribozyme Precursor, With C75u Mutaion, And Mn2+ Bound
gi|49259524|pdb|1VBZ|A Chain A, Crystal Structure Of The Hepatitis Delta Virus Gemonic
Ribozyme Precursor, With C75u Mutaion, In Ba2+ Solution
gi|49259526|pdb|1VC0|A Chain A, Crystal Structure Of The Hepatitis Delta Virus Gemonic
Ribozyme Precursor, With C75u Mutaion, In Imidazole And
Sr2+ Solution
gi|49259528|pdb|1VC5|A Chain A, Crystal Structure Of The Wild Type Hepatitis Delta Virus
Gemonic Ribozyme Precursor, In Edta Solution
gi|49259530|pdb|1VC6|A Chain A, Crystal Structure Of The Hepatitis Delta Virus Gemonic
Ribozyme Product With C75u Mutaion, Cleaved In Imidazole
And Mg2+ Solutions
gi|49259532|pdb|1VC7|A Chain A, Crystal Structure Of The Hepatitis Delta Virus Gemonic
Ribozyme Precursor, With C75u Mutaion, In Sr2+ Solution
gi|145580050|pdb|2OIH|A Chain A, Hepatitis Delta Virus Gemonic Ribozyme Precursor With C75u
Mutation And Bound To Monovalent Cation Tl+
gi|145580056|pdb|2OJ3|A Chain A, Hepatitis Delta Virus Ribozyme Precursor Structure, With
C75u Mutation, Bound To Tl+ And Cobalt Hexammine
(Co(Nh3) 63+)
Length = 100
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQ----FLRFGELESVAFQ---PGRSYAFINFKIEEDA 81
T P+ +++ NL+ I++ L F RFG++ + R AF+ FK A
Sbjct: 6 TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSA 65
Query: 82 IASMKALQGFPLAGNPLRIEFAKA 105
+++++QGFP P+RI++AK
Sbjct: 66 TNALRSMQGFPFYDKPMRIQYAKT 89
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%)
Query: 23 GGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAI 82
G N P + ++VGNL N+ + +L F ++GEL V G+ F+ F A
Sbjct: 255 GTQNENDPNNTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAE 314
Query: 83 ASMKALQGFPLAGNPLRIEFAKA 105
+++ L G P+ G +R+ + ++
Sbjct: 315 EALRILNGTPIGGQNIRLSWGRS 337
>gi|430811054|emb|CCJ31450.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 484
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PGRSYAFINFKIEE 79
GGR + P L+VGN+ N+ E +L F FGELE V Q GRS + +
Sbjct: 204 GGRQSDAPFHRLYVGNIHFNLTEDDLRQIFEPFGELEFVQLQKEPDTGRSRGYGFVQDPA 263
Query: 80 DAIASMKALQGFPLAGNPLRI 100
A +++ + GF LAG +R+
Sbjct: 264 QARDALEKMNGFELAGRAIRV 284
>gi|251765071|sp|B5FXN8.1|THOC4_TAEGU RecName: Full=THO complex subunit 4; Short=Tho4; AltName:
Full=Aly/REF export factor
gi|197127301|gb|ACH43799.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127302|gb|ACH43800.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127303|gb|ACH43801.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127304|gb|ACH43802.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127306|gb|ACH43804.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Query: 2 GRGGGRER----FRGGRF-----EDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQ 52
RGGGR R R + D SG G A L V NL + +A++ +
Sbjct: 63 ARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDADIQEL 122
Query: 53 FLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
F FG L+ A RS A ++F+ + DA+ +MK G PL G P+ I+ +
Sbjct: 123 FAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 180
>gi|328708342|ref|XP_003243663.1| PREDICTED: putative RNA-binding protein 15B-like [Acyrthosiphon
pisum]
Length = 761
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIAS 84
G + P++ +WVG L A L +F RFG ++ + + G A+I F+ + A A+
Sbjct: 387 GYGKSTPTQRIWVGGLGPWTSLAQLEQEFDRFGVIKKIEYVKGDICAYIQFESIDAATAA 446
Query: 85 MKALQGFPLAGN--PLRIEFA 103
+K ++G L G+ LR +FA
Sbjct: 447 VKEMRGVALGGSEHKLRTDFA 467
>gi|118788821|ref|XP_317010.3| AGAP008433-PA [Anopheles gambiae str. PEST]
gi|116122929|gb|EAA12873.4| AGAP008433-PA [Anopheles gambiae str. PEST]
Length = 526
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI E L F FG+++++ GRS Y FI F +DA +++ L
Sbjct: 271 LYVGSLHFNITEDMLNGIFEPFGKIDNIQLIMDADTGRSKGYGFITFHNADDAKKALEQL 330
Query: 89 QGFPLAGNPLRI 100
GF LAG P+++
Sbjct: 331 NGFELAGRPMKV 342
>gi|55792397|gb|AAV65309.1| splicing factor SF2-like protein [Hordeum vulgare subsp. vulgare]
Length = 245
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGRS--YAFINFKIEEDAIASMKAL 88
SR ++VGNL +I E + D F ++G + + + P R +AF+ F+ DA +++
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKVPPRPPGFAFVEFEDPRDAEDAIQGR 65
Query: 89 QGFPLAGNPLRIEFA 103
G+ GN LR+E A
Sbjct: 66 DGYNFDGNRLRVELA 80
>gi|298710792|emb|CBJ32209.1| RNA-binding protein SiahBP [Ectocarpus siliculosus]
Length = 696
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 11/90 (12%)
Query: 22 GGGGRANTPPS-----RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS------Y 70
G G R T P+ R ++VG+L + ++E+++T F FG L+ V S +
Sbjct: 271 GAGTRTQTAPAQPSNPRRIYVGSLHYELKESDITSIFANFGALKLVDMSHDSSTGRHKGF 330
Query: 71 AFINFKIEEDAIASMKALQGFPLAGNPLRI 100
FI + + A A+++A+ GF LAG +++
Sbjct: 331 CFIEYVDVKSADAALRAMNGFELAGRAIKV 360
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 43/82 (52%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIA 83
G N P + ++VGNL N+ + NL + F R+G+L V G+ F+ F A
Sbjct: 281 GENENDPNNTTIFVGNLDSNVTDDNLRELFGRYGQLLHVKIPAGKRCGFVQFADRSCAEE 340
Query: 84 SMKALQGFPLAGNPLRIEFAKA 105
+++ L G L+G +R+ + ++
Sbjct: 341 ALRLLNGTSLSGQSIRLSWGRS 362
>gi|197127309|gb|ACH43807.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
gi|197127310|gb|ACH43808.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Query: 2 GRGGGRER----FRGGRF-----EDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQ 52
RGGGR R R + D SG G A L V NL + +A++ +
Sbjct: 63 ARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDADIQEL 122
Query: 53 FLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
F FG L+ A RS A ++F+ + DA+ +MK G PL G P+ I+ +
Sbjct: 123 FAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS 180
>gi|115387505|ref|XP_001211258.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195342|gb|EAU37042.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 254
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-YAFINFKIEEDAIASMKAL 88
PP++ L++ +L N ++ +LT F RF + V PGR AF+ ++ E AI++ +A
Sbjct: 176 PPNKILFLRDLPDNADQDSLTAVFGRFEGFQEVRLVPGRKGIAFVEYENESGAISAKEAT 235
Query: 89 QGFPL--AGNPLRIEFAK 104
G P+ G P+R+ + +
Sbjct: 236 SGMPMGEQGKPIRVTYQR 253
>gi|390602583|gb|EIN11976.1| hypothetical protein PUNSTDRAFT_50769 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 217
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEED 80
SG + P+R LW+G++ A + F +G +E ++ FINF+ +D
Sbjct: 71 SGMDAQLQLTPTRTLWIGSIPSTTTPAAILSVFSPYGPIEFARVLTHKNCGFINFERLDD 130
Query: 81 AIASMKALQGFPLAGN---PLRIEFAKA 105
A+ + KAL G + G+ +RI FAK
Sbjct: 131 AVHARKALNGHDILGSDVGAIRIGFAKV 158
>gi|324511732|gb|ADY44878.1| Heterogeneous nuclear ribonucleoprotein Q, partial [Ascaris suum]
Length = 561
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL + E L + F GE++ V + + YAFI+F E A+ +M+AL G L
Sbjct: 378 LYVRNLKEAVTEEQLKEMFSAHGEVDHV--KKIKDYAFIHFNEREPAVKAMEALNGTVLE 435
Query: 95 GNPLRIEFAK 104
G P+ I AK
Sbjct: 436 GVPIEISLAK 445
>gi|324501089|gb|ADY40490.1| Heterogeneous nuclear ribonucleoprotein Q [Ascaris suum]
Length = 418
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL + E L + F GE++ V + + YAFI+F E A+ +M+AL G L
Sbjct: 119 LYVRNLKEAVTEEQLKEMFSAHGEVDHV--KKIKDYAFIHFNEREPAVKAMEALNGTVLE 176
Query: 95 GNPLRIEFAK 104
G P+ I AK
Sbjct: 177 GVPIEISLAK 186
>gi|225558481|gb|EEH06765.1| pumilio domain-containing protein c [Ajellomyces capsulatus G186AR]
Length = 1213
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 5 GGRERFRGGR-FEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVA 63
GG + R G+ D T+ G P+R LW+G++ + +L F +G++ES
Sbjct: 450 GGMQSLRQGQEILDETNLDG-------PTRALWIGSIPVSTTVTSLDAIFNVYGKIESTR 502
Query: 64 FQPGRSYAFINFKIEEDAIASMKALQG---FPLAGNPLRIEFAKA 105
++ F+NF+ E AI + L G FP AG P+RI +AK
Sbjct: 503 VLTHKNCGFVNFERVESAIQAKSLLNGKEIFPGAG-PVRIGYAKV 546
>gi|115400675|ref|XP_001215926.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191592|gb|EAU33292.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1190
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ + +L F R+G++ES ++ F+NF+ + A+ + L G
Sbjct: 479 PTRALWIGSIPVSTTITSLAAIFSRYGKIESTRVLTHKNCGFVNFERIDSAVQARSMLNG 538
Query: 91 ---FPLAGNPLRIEFAKA 105
FP AG P+RI +AK
Sbjct: 539 TEIFPGAG-PVRIGYAKV 555
>gi|161831384|ref|YP_001596772.1| glycine-rich RNA binding protein [Coxiella burnetii RSA 331]
gi|161763251|gb|ABX78893.1| glycine-rich RNA binding protein [Coxiella burnetii RSA 331]
Length = 128
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 11 RGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVA----FQP 66
RG R +D + + ++VGNL +++ E +L F RFG +ESV F+
Sbjct: 28 RGNRLDDSSWKSDN-------NDQIYVGNLPYHVVENDLHQYFSRFGAIESVKIVRNFRT 80
Query: 67 GRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
GRS YAF+ + + A+ ++ A G L G L + AK+
Sbjct: 81 GRSKGYAFVTYVTPKQAVKALDA-HGKDLQGRSLVVRIAKS 120
>gi|296235404|ref|XP_002762884.1| PREDICTED: putative RNA-binding protein 3 [Callithrix jacchus]
Length = 159
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKAL 88
L+VG L+ N +E L D F FG + V Q R + FI F E A +M+A+
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAM 67
Query: 89 QGFPLAGNPLRIEFA 103
G L G +R++ A
Sbjct: 68 NGESLDGRQIRVDHA 82
>gi|170058744|ref|XP_001865056.1| splicing factor [Culex quinquefasciatus]
gi|167877732|gb|EDS41115.1| splicing factor [Culex quinquefasciatus]
Length = 546
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI E L F FG+++++ GRS Y FI F +DA +++ L
Sbjct: 291 LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQL 350
Query: 89 QGFPLAGNPLRI 100
GF LAG P+++
Sbjct: 351 NGFELAGRPMKV 362
>gi|357136599|ref|XP_003569891.1| PREDICTED: uncharacterized protein LOC100834200 [Brachypodium
distachyon]
Length = 1094
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
+ LWVG+L +N EA + +F FG L + F P + +A + + A+ ++ +QG
Sbjct: 496 KELWVGSLGNNAAEALVRSKFEEFGPLTNFLFHPSKDFALVEYGNIMHAVQAVGYMQGSS 555
Query: 93 LAGNPLRIEF 102
+ G L+I +
Sbjct: 556 IWGGGLQIRY 565
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF---QPGRS--YAFINFKIEEDAIASMKALQ 89
L+VG+L N++EA L F R G + S+ + RS YA++NF +DA +M+ L
Sbjct: 8 LYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAANAMEHLN 67
Query: 90 GFPLAGNPLRIEFA 103
PL G +R+ F+
Sbjct: 68 FTPLNGKSIRVMFS 81
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELES--VAFQP-GRS--YAFINFKIEEDAIASMKAL 88
+L+V NL +NI + L + F FG + S V +P GRS Y F+ F +A ++ +
Sbjct: 289 NLYVKNLDYNINDDKLKELFSEFGTITSCKVMLEPNGRSKGYGFVAFSAPRNANRALHEM 348
Query: 89 QGFPLAGNPLRIEFAK 104
G + PL + A+
Sbjct: 349 NGKMIGRRPLYVAVAQ 364
>gi|301764797|ref|XP_002917810.1| PREDICTED: putative RNA-binding protein 3-like isoform 1
[Ailuropoda melanoleuca]
Length = 156
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKAL 88
L+VG L+ N +E L D F FG + V Q R + FI F E A +M+A+
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 89 QGFPLAGNPLRIEFA 103
G L G +R++ A
Sbjct: 68 NGESLDGRQIRVDHA 82
>gi|225433902|ref|XP_002265598.1| PREDICTED: peptidyl-prolyl cis-trans isomerase E [Vitis vinifera]
gi|297743796|emb|CBI36679.3| unnamed protein product [Vitis vinifera]
Length = 173
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 7/83 (8%)
Query: 28 NTPPSRH-LWVGNLSHNIEEANLTDQFLRFGELESV------AFQPGRSYAFINFKIEED 80
N P ++ L+VG L+ + E+ L F+ FG+++ V A Q RS+ F+ F +ED
Sbjct: 2 NQPVQKNTLYVGGLAEEVNESILHSAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEKED 61
Query: 81 AIASMKALQGFPLAGNPLRIEFA 103
A A+M + G L G L + +A
Sbjct: 62 AAAAMDNMDGAELYGRVLTVNYA 84
>gi|312384272|gb|EFR29035.1| hypothetical protein AND_02328 [Anopheles darlingi]
Length = 556
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELES--VAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL+ +++ +L +F ++G+L S VAF P +AFI F+ +++A + L G
Sbjct: 9 VYVGNLTDKVKKEDLEGEFTKYGKLNSVWVAFNPP-GFAFIEFENKDEAETACDNLNGQD 67
Query: 93 LAGNPLRIEFAK 104
+ G+ LR+E +K
Sbjct: 68 ILGSKLRVEISK 79
>gi|240274917|gb|EER38432.1| RNA binding protein Jsn1 [Ajellomyces capsulatus H143]
Length = 1035
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 5 GGRERFRGGR-FEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVA 63
GG + R G+ D T+ G P+R LW+G++ + +L F +G++ES
Sbjct: 263 GGMQSLRQGQEILDETNLDG-------PTRALWIGSIPVSTTVTSLDAIFNVYGKIESTR 315
Query: 64 FQPGRSYAFINFKIEEDAIASMKALQG---FPLAGNPLRIEFAKA 105
++ F+NF+ E AI + L G FP AG P+RI +AK
Sbjct: 316 VLTHKNCGFVNFERVESAIQAKSLLNGKEIFPGAG-PVRIGYAKV 359
>gi|2982060|pdb|1AUD|A Chain A, U1a-Utrrna, Nmr, 31 Structures
gi|157874113|pdb|1DZ5|A Chain A, The Nmr Structure Of The 38kda U1a Protein-Pie Rna Complex
Reveals The Basis Of Cooperativity In Regulation Of
Polyadenylation By Human U1a Protein
gi|157874114|pdb|1DZ5|B Chain B, The Nmr Structure Of The 38kda U1a Protein-Pie Rna Complex
Reveals The Basis Of Cooperativity In Regulation Of
Polyadenylation By Human U1a Protein
Length = 101
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQ----FLRFGELESVAFQ---PGRSYAFINFKIEEDA 81
T P+ +++ NL+ I++ L F RFG++ + R AF+ FK A
Sbjct: 5 TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSA 64
Query: 82 IASMKALQGFPLAGNPLRIEFAKA 105
+++++QGFP P+RI++AK
Sbjct: 65 TNALRSMQGFPFYDKPMRIQYAKT 88
>gi|172046470|emb|CAQ34907.1| ASF/SF2 protein [Chironomus tentans]
Length = 246
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQP--GRSYAFINFKIEEDAIASMKALQGFP 92
++VGNL +I ++ D F RFG++ V + G + F+ F+ DA ++KA +
Sbjct: 11 IYVGNLPPDIRTKDVEDLFFRFGKVSFVDLKNRRGPPFVFVEFEDHRDASDAVKARSNYD 70
Query: 93 LAGNPLRIEFAK 104
G LR+EF +
Sbjct: 71 YDGYKLRVEFPR 82
>gi|71649142|ref|XP_813322.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70878194|gb|EAN91471.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 401
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 42/75 (56%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+ LW+G+L + L + F FG++++++ R+ AFI+F+ ED ++ ++
Sbjct: 304 PTNVLWLGDLPPTVSNEELNENFKVFGKIKTISRLDSRNMAFIHFETIEDCTQALDLMRD 363
Query: 91 FPLAGNPLRIEFAKA 105
P+ G + + + +A
Sbjct: 364 QPIGGARVVLNYGRA 378
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 PSRHLWVGNLS-HNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL 88
P+ +WVGNL H E L +F FG + +A P +SY F++F+ E+A +++AL
Sbjct: 183 PTNTVWVGNLDLHEHTEEALRREFSEFGGVIRIARVPDKSYCFVHFRYVEEARNAVEAL 241
>gi|167515992|ref|XP_001742337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778961|gb|EDQ92575.1| predicted protein [Monosiga brevicollis MX1]
Length = 164
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGF 91
SR ++VGNL +I E L + F ++G + + + YAF+ F+ E DA ++ G
Sbjct: 5 SRRVYVGNLPRDIRERELDELFYKYGRILDIHIKG--PYAFVTFEDERDAEDAVHGRDGI 62
Query: 92 PLAGNPLRIEFA 103
AG LR+E +
Sbjct: 63 NFAGGRLRVELS 74
>gi|417396785|gb|JAA45426.1| Putative mrna cleavage and polyadenylation factor i complex subunit
rna15 [Desmodus rotundus]
Length = 190
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKAL 88
L+VG L+ N +E L D F FG + V Q R + FI F E A +M+A+
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 89 QGFPLAGNPLRIEFA 103
G L G +R++ A
Sbjct: 68 NGESLDGRQIRVDHA 82
>gi|395859409|ref|XP_003802032.1| PREDICTED: probable RNA-binding protein 23 [Otolemur garnettii]
Length = 449
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PGRS--YAFINFKIEEDAIASMKA 87
HL+VG+L NI E L F FG+++++ GRS Y FI F E A +++
Sbjct: 269 HLFVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQ 328
Query: 88 LQGFPLAGNPLRI 100
L GF LAG P+++
Sbjct: 329 LNGFELAGRPMKV 341
>gi|350630544|gb|EHA18916.1| hypothetical protein ASPNIDRAFT_42727 [Aspergillus niger ATCC 1015]
Length = 249
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-YAFINFKIEEDAIASMKAL 88
PP++ L++ +L ++ +LT F RF + V PGR AF+ ++ E AI++ +A
Sbjct: 171 PPNKILFLRDLPDTADQDSLTAVFGRFEGFQEVRLVPGRKGIAFVEYENESGAISAKEAT 230
Query: 89 QGFPL--AGNPLRIEFAK 104
G P+ AG P+R+ + +
Sbjct: 231 SGMPMGEAGKPIRVTYQR 248
>gi|255069811|gb|ACU00255.1| AT04629p [Drosophila melanogaster]
Length = 489
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFPLA 94
L+V NL+ ++ E L +QF ++G++E V + + YAFI+F+ + A+ +M+ L G +
Sbjct: 412 LYVRNLTQDVSEDKLKEQFEQYGKVERV--KKIKDYAFIHFEDRDSAVEAMRGLNGKEIG 469
Query: 95 GNPLRIEFAK 104
+ + + AK
Sbjct: 470 ASNIEVSLAK 479
>gi|170071297|ref|XP_001869868.1| splicing factor [Culex quinquefasciatus]
gi|167867202|gb|EDS30585.1| splicing factor [Culex quinquefasciatus]
Length = 524
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI E L F FG+++++ GRS Y FI F +DA +++ L
Sbjct: 269 LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTGRSKGYGFITFHNADDAKKALEQL 328
Query: 89 QGFPLAGNPLRI 100
GF LAG P+++
Sbjct: 329 NGFELAGRPMKV 340
>gi|335310533|ref|XP_003362077.1| PREDICTED: probable RNA-binding protein 23 [Sus scrofa]
Length = 443
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-- 65
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 246 EKNRLAAMANNLQKGTGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 299
Query: 66 --PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+RI
Sbjct: 300 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRI 338
>gi|255730137|ref|XP_002549993.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131950|gb|EER31508.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 442
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIE 78
G + +PPS L++GNLS N L + F +G + S Q + + ++ F
Sbjct: 308 GDSQSPPSDTLFIGNLSFNANRDGLFNTFGEYGNVISCRIPTHPDTQQPKGFGYVQFSSV 367
Query: 79 EDAIASMKALQGFPLAGNPLRIEFA 103
++A A+++AL G + G P R++F+
Sbjct: 368 DEAKAALEALNGQYIEGRPCRLDFS 392
>gi|195350023|ref|XP_002041541.1| GM16721 [Drosophila sechellia]
gi|194123314|gb|EDW45357.1| GM16721 [Drosophila sechellia]
Length = 2358
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 40/73 (54%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+ +W+ + + E+ L QF RFG + V+ + A + + ++A A++K ++G
Sbjct: 731 PTNCVWIDGVGEKVPESFLQSQFTRFGTVTKVSIDRSKQLALVLYDQVQNAQAAVKDMRG 790
Query: 91 FPLAGNPLRIEFA 103
L G L+++FA
Sbjct: 791 TILRGRKLQVDFA 803
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG--RSYAFINFKIEEDAIASMKALQ 89
+R L++GNL +I L F FGE+ + + +YAF + + +M+ +
Sbjct: 654 TRTLFIGNLEKDITAGELRGHFEAFGEIIEIDIKKQGLNAYAFCQYSDIVSVVKAMRKMD 713
Query: 90 GFPLAGNPLRIEFAKA 105
G L N +++ F K+
Sbjct: 714 GEHLGSNRIKLGFGKS 729
>gi|189339246|ref|NP_446148.1| putative RNA-binding protein 3 [Rattus norvegicus]
gi|149028410|gb|EDL83795.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
gi|149028411|gb|EDL83796.1| RNA binding motif protein 3, isoform CRA_a [Rattus norvegicus]
Length = 156
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKAL 88
L+VG L+ N +E L D F FG + V Q R + FI F E A +M+A+
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 89 QGFPLAGNPLRIEFA 103
G L G +R++ A
Sbjct: 68 NGESLDGRQIRVDHA 82
>gi|317037176|ref|XP_001398705.2| U1 small nuclear ribonucleoprotein usp102 [Aspergillus niger CBS
513.88]
Length = 251
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-YAFINFKIEEDAIASMKAL 88
PP++ L++ +L ++ +LT F RF + V PGR AF+ ++ E AI++ +A
Sbjct: 173 PPNKILFLRDLPDTADQDSLTAVFGRFEGFQEVRLVPGRKGIAFVEYENESGAISAKEAT 232
Query: 89 QGFPL--AGNPLRIEFAK 104
G P+ AG P+R+ + +
Sbjct: 233 SGMPMGEAGKPIRVTYQR 250
>gi|254579785|ref|XP_002495878.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
gi|238938769|emb|CAR26945.1| ZYRO0C05060p [Zygosaccharomyces rouxii]
Length = 716
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P + +++G L+ I E L F FG + +V G++ F+ F+ DA A+++ +Q
Sbjct: 418 PNNTTVFIGGLTPKINENQLQTLFSPFGNILTVKIPQGKNCGFVKFEKRIDAEAAIQGMQ 477
Query: 90 GFPLAGNPLRIEFAK 104
GF + G P+R+ + +
Sbjct: 478 GFVVGGCPIRLSWGR 492
>gi|171849013|pdb|3BO2|A Chain A, A Relaxed Active Site Following Exon Ligation By A Group I
Intron
gi|171849018|pdb|3BO3|A Chain A, A Relaxed Active Site Following Exon Ligation By A Group I
Intron
gi|171849022|pdb|3BO4|A Chain A, A Relaxed Active Site Following Exon Ligation By A Group I
Intron
gi|290790099|pdb|3IIN|A Chain A, Plasticity Of The Kink Turn Structural Motif
Length = 95
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQ----FLRFGELESVAFQ---PGRSYAFINFKIEEDA 81
T P+ +++ NL+ I++ L F RFG++ + R AF+ FK A
Sbjct: 3 TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSA 62
Query: 82 IASMKALQGFPLAGNPLRIEFAKA 105
+++++QGFP P+RI++AK
Sbjct: 63 TNALRSMQGFPFYDKPMRIQYAKT 86
>gi|443897314|dbj|GAC74655.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 979
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIA 83
G A P + ++VG LS I E+ L F FGE+ V PG+ F+ + ++DA
Sbjct: 575 GDSAADPNNTTVFVGGLSSLISESTLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAEN 634
Query: 84 SMKALQGFPLAGNPLRIEFAKA 105
+++ + GFP+ + +R+ + ++
Sbjct: 635 AIQRMNGFPILNSKIRLSWGRS 656
>gi|407852101|gb|EKG05754.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 746
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 42/75 (56%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+ LW+G+L + L + F FG++++++ R+ AFI+F+ ED ++ ++
Sbjct: 304 PTNVLWLGDLPPTVSNEELNENFKVFGKIKTISRLDSRNMAFIHFETIEDCTQALDLMRD 363
Query: 91 FPLAGNPLRIEFAKA 105
P+ G + + + +A
Sbjct: 364 QPIGGARVVLNYGRA 378
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 31 PSRHLWVGNLS-HNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQ 89
P+ +WVGNL H E L +F FG + +A P +SY F++F+ E+A +++AL
Sbjct: 183 PTNTVWVGNLDLHEHTEEALRREFSEFGGVIRIARVPDKSYCFVHFRYVEEARNAVEALS 242
Query: 90 G 90
Sbjct: 243 A 243
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIA 83
G N P+ +++G L+ ++ E ++ D F F + F AF +F E A A
Sbjct: 393 GIPVNETPTNVVYLGQLASDVTEGDVEDLFETFEGFINSKFIQSSGIAFGHFDSIEHARA 452
Query: 84 SMKALQGFPLAGNPLRIEFAKA 105
+ AL L G PLRI F K+
Sbjct: 453 ARIALNNALLRGAPLRISFGKS 474
>gi|426241414|ref|XP_004014586.1| PREDICTED: RNA-binding protein 39 isoform 7 [Ovis aries]
Length = 367
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 74 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 127
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF L G P+++
Sbjct: 128 SETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKV 166
>gi|213515460|ref|NP_001133886.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|209155694|gb|ACI34079.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
gi|223649152|gb|ACN11334.1| Splicing factor, arginine/serine-rich 9 [Salmo salar]
Length = 252
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGR---SYAFINFKIEEDAIASMKALQGF 91
++VGNL +++E ++ D F ++G++ + + R +AF+ F+ DA ++ G+
Sbjct: 6 IYVGNLPMDVQERDIEDLFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVYGRNGY 65
Query: 92 PLAGNPLRIEFAKA 105
L + LR+E+ ++
Sbjct: 66 GLGDSKLRVEYPRS 79
>gi|197127308|gb|ACH43806.1| putative disulfide-isomerase precursor [Taeniopygia guttata]
Length = 254
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQ 89
L V NL + +A++ + F FG L+ A RS A ++F+ + DA+ +MK
Sbjct: 105 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 164
Query: 90 GFPLAGNPLRIEFAKA 105
G PL G P+ I+ +
Sbjct: 165 GVPLDGRPMNIQLVTS 180
>gi|119586631|gb|EAW66227.1| RNA binding motif protein 23, isoform CRA_f [Homo sapiens]
Length = 269
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-- 65
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 74 EKNRLAAMANNLQKGNGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 127
Query: 66 --PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 128 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 166
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF L G P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKV 323
>gi|29654256|ref|NP_819948.1| RNA binding protein [Coxiella burnetii RSA 493]
gi|153207639|ref|ZP_01946303.1| glycine rich RNA binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|154706606|ref|YP_001424503.1| RNA binding protein [Coxiella burnetii Dugway 5J108-111]
gi|165918878|ref|ZP_02218964.1| glycine rich RNA binding protein [Coxiella burnetii Q321]
gi|212212620|ref|YP_002303556.1| RNA binding protein [Coxiella burnetii CbuG_Q212]
gi|212218487|ref|YP_002305274.1| RNA binding protein [Coxiella burnetii CbuK_Q154]
gi|29541522|gb|AAO90462.1| RNA binding protein [Coxiella burnetii RSA 493]
gi|120576458|gb|EAX33082.1| glycine rich RNA binding protein [Coxiella burnetii 'MSU Goat
Q177']
gi|154355892|gb|ABS77354.1| RNA binding protein [Coxiella burnetii Dugway 5J108-111]
gi|165917426|gb|EDR36030.1| glycine rich RNA binding protein [Coxiella burnetii Q321]
gi|212011030|gb|ACJ18411.1| RNA binding protein [Coxiella burnetii CbuG_Q212]
gi|212012749|gb|ACJ20129.1| RNA binding protein [Coxiella burnetii CbuK_Q154]
Length = 129
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 13 GRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVA----FQPGR 68
GR +DR N ++VGNL +++ E +L F RFG +ESV F+ GR
Sbjct: 27 GRGKDRLDDSSWKSDNND---QIYVGNLPYHVVENDLHQYFSRFGAIESVKIVRNFRTGR 83
Query: 69 S--YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
S YAF+ + + A+ ++ A G L G L + AK+
Sbjct: 84 SKGYAFVTYVTPKQAVKALDA-HGKDLQGRSLVVRIAKS 121
>gi|212274941|ref|NP_001130982.1| hypothetical protein [Zea mays]
gi|194690622|gb|ACF79395.1| unknown [Zea mays]
gi|413951564|gb|AFW84213.1| hypothetical protein ZEAMMB73_909652 [Zea mays]
Length = 142
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ----PGRS--YAFINFKI 77
G A T SR L+V LS +++E +LTD F FG + V GRS + F++F
Sbjct: 40 GAPAPTSDSR-LFVAGLSWSVDERSLTDAFSSFGTVTEVRIMYDKNSGRSRGFGFVHFSN 98
Query: 78 EEDAIASMKALQGFPLAGNPLRIEFA 103
+ +A + A+ G + G PLRI FA
Sbjct: 99 DNEAKCAKDAMDGKVMLGRPLRISFA 124
>gi|345326219|ref|XP_001506578.2| PREDICTED: APOBEC1 complementation factor [Ornithorhynchus
anatinus]
Length = 655
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 35 LWVGNLSHNIEEANLTDQF--LRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
L+V NL + E + +F ++ G +E V + R YAF++F EDA+ +MKAL G
Sbjct: 233 LYVRNLMLSTSEETIEREFNNIKPGAVERV--KKIRDYAFVHFNNREDAVGAMKALNGKV 290
Query: 93 LAGNPLRIEFAK 104
L G+P+ + AK
Sbjct: 291 LDGSPIEVTLAK 302
>gi|350538645|ref|NP_001233728.1| RNA-binding motif 3 [Cricetulus griseus]
gi|189170130|gb|ACD80090.1| RNA-binding motif 3 [Cricetulus griseus]
Length = 156
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKAL 88
L+VG L+ N +E L D F FG + V Q R + FI F E A +M+A+
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 89 QGFPLAGNPLRIEFA 103
G L G +R++ A
Sbjct: 68 NGESLDGRQIRVDHA 82
>gi|198426742|ref|XP_002131325.1| PREDICTED: similar to cold-inducible RNA-binding protein [Ciona
intestinalis]
Length = 167
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
++VGNLS++ E +LT +F FGE+E VA GRS +AF+ F+ EE A ++K +
Sbjct: 7 VFVGNLSYDATEDDLTKRFSDFGEVEQVAIITDRDTGRSRGFAFVTFREEEGAATAIKEM 66
Query: 89 QGFPLAGNPLRIEFAKA 105
G + + A++
Sbjct: 67 HEEDFLGRSVTVREAQS 83
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 209 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 262
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF L G P+++
Sbjct: 263 SETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKV 301
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
+ T P R L+VG+L NI E L F FG+++++ + GRS Y F+ F+ +
Sbjct: 239 KGQTGPMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNAD 297
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA +++ L GF LAG P+++
Sbjct: 298 DAKKALEQLNGFELAGRPMKV 318
>gi|1431699|pdb|1URN|A Chain A, U1a MutantRNA COMPLEX + GLYCEROL
gi|1431701|pdb|1URN|B Chain B, U1a MutantRNA COMPLEX + GLYCEROL
gi|1431703|pdb|1URN|C Chain C, U1a MutantRNA COMPLEX + GLYCEROL
gi|28949021|pdb|1NU4|A Chain A, U1a Rna Binding Domain At 1.8 Angstrom Resolution Reveals
A Pre- Organized C-Terminal Helix
gi|28949022|pdb|1NU4|B Chain B, U1a Rna Binding Domain At 1.8 Angstrom Resolution Reveals
A Pre- Organized C-Terminal Helix
gi|269914461|pdb|3HHN|B Chain B, Crystal Structure Of Class I Ligase Ribozyme Self-Ligation
Product, In Complex With U1a Rbd
gi|269914463|pdb|3HHN|D Chain D, Crystal Structure Of Class I Ligase Ribozyme Self-Ligation
Product, In Complex With U1a Rbd
Length = 97
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQ----FLRFGELESVAFQ---PGRSYAFINFKIEEDA 81
T P+ +++ NL+ I++ L F RFG++ + R AF+ FK A
Sbjct: 5 TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSA 64
Query: 82 IASMKALQGFPLAGNPLRIEFAKA 105
+++++QGFP P+RI++AK
Sbjct: 65 TNALRSMQGFPFYDKPMRIQYAKT 88
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 237 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 290
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF L G P+++
Sbjct: 291 SETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKV 329
>gi|221044666|dbj|BAH14010.1| unnamed protein product [Homo sapiens]
Length = 270
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-- 65
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 74 EKNRLAAMANNLQKGNGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 127
Query: 66 --PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 128 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 166
>gi|149756182|ref|XP_001494921.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Equus
caballus]
Length = 412
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-- 65
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 213 EKNRLAAMANNLQKGSGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 266
Query: 66 --PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 267 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 305
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 22 GGGGRANTPPSR--HLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFI 73
GG N+ P L+VG++ +I E +L F FGE+ S+ + GRS + F+
Sbjct: 293 GGDTSPNSNPLTFTKLYVGSIHFSISEDDLRTIFEPFGEVISLQLHKDPETGRSRGFGFV 352
Query: 74 NFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
+K EDA + + L G LAG PL++ A A
Sbjct: 353 QYKNHEDAKKAFEQLNGLDLAGRPLKVGLATA 384
>gi|162457883|ref|NP_001105264.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
gi|47680309|gb|AAT37138.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
gi|47680375|gb|AAT37129.1| arginine/serine-rich splicing factor 2 variant 2 [Zea mays]
Length = 193
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 33 RHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQGFP 92
R ++VGNL ++ + L F R+G +E + + G YAF+ F+ E D +++AL G+P
Sbjct: 2 RPVFVGNLDYDTRHSELDRLFYRYGRVERIDIKSG--YAFVYFEDERDGNDAIRALDGYP 59
Query: 93 L 93
Sbjct: 60 F 60
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 19 THSGGGGRANTPPSRHLWVGNLS-HNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKI 77
+ G ANT P+R L+V N N +++ F FG + SV + +++AF+ F+
Sbjct: 72 SRDGNKPEANTKPTRTLFVINFDPMNTRVSDIERHFTPFGNISSVRIR--KNFAFVQFET 129
Query: 78 EEDAIASMKALQGFPLAGNPLRIEFA 103
E+A +++A L + +E+A
Sbjct: 130 MEEARKALEATHATTLLDRVISVEYA 155
>gi|52696011|pdb|1U6B|A Chain A, Crystal Structure Of A Self-Splicing Group I Intron With
Both Exons
gi|75765951|pdb|1ZZN|A Chain A, Crystal Structure Of A Group I IntronTWO EXON COMPLEX THAT
Includes All Catalytic Metal Ion Ligands.
gi|262367893|pdb|3G8S|A Chain A, Crystal Structure Of The Pre-Cleaved Bacillus Anthracis
Glms Ribozyme
gi|262367896|pdb|3G8S|B Chain B, Crystal Structure Of The Pre-Cleaved Bacillus Anthracis
Glms Ribozyme
gi|262367899|pdb|3G8S|C Chain C, Crystal Structure Of The Pre-Cleaved Bacillus Anthracis
Glms Ribozyme
gi|262367902|pdb|3G8S|D Chain D, Crystal Structure Of The Pre-Cleaved Bacillus Anthracis
Glms Ribozyme
gi|262367905|pdb|3G8T|A Chain A, Crystal Structure Of The G33a Mutant Bacillus Anthracis
Glms Ribozyme Bound To Glcn6p
gi|262367908|pdb|3G8T|B Chain B, Crystal Structure Of The G33a Mutant Bacillus Anthracis
Glms Ribozyme Bound To Glcn6p
gi|262367911|pdb|3G8T|C Chain C, Crystal Structure Of The G33a Mutant Bacillus Anthracis
Glms Ribozyme Bound To Glcn6p
gi|262367914|pdb|3G8T|D Chain D, Crystal Structure Of The G33a Mutant Bacillus Anthracis
Glms Ribozyme Bound To Glcn6p
gi|262367929|pdb|3G96|A Chain A, Crystal Structure Of The Bacillus Anthracis Glms Ribozyme
Bound To Man6p
gi|262367932|pdb|3G96|B Chain B, Crystal Structure Of The Bacillus Anthracis Glms Ribozyme
Bound To Man6p
gi|262367935|pdb|3G96|C Chain C, Crystal Structure Of The Bacillus Anthracis Glms Ribozyme
Bound To Man6p
gi|262367938|pdb|3G96|D Chain D, Crystal Structure Of The Bacillus Anthracis Glms Ribozyme
Bound To Man6p
gi|262367941|pdb|3G9C|A Chain A, Crystal Structure Of The Product Bacillus Anthracis Glms
Ribozyme
gi|262367944|pdb|3G9C|B Chain B, Crystal Structure Of The Product Bacillus Anthracis Glms
Ribozyme
gi|262367947|pdb|3G9C|C Chain C, Crystal Structure Of The Product Bacillus Anthracis Glms
Ribozyme
gi|262367950|pdb|3G9C|D Chain D, Crystal Structure Of The Product Bacillus Anthracis Glms
Ribozyme
gi|266618687|pdb|3IRW|P Chain P, Structure Of A C-Di-Gmp Riboswitch From V. Cholerae
gi|304445913|pdb|3MUM|P Chain P, Crystal Structure Of The G20a Mutant C-Di-Gmp Riboswith
Bound To C-Di- Gmp
gi|304445915|pdb|3MUR|P Chain P, Crystal Structure Of The C92u Mutant C-Di-Gmp Riboswith
Bound To C-Di- Gmp
gi|304445917|pdb|3MUT|P Chain P, Crystal Structure Of The G20aC92U MUTANT C-Di-Gmp
Riboswith Bound To C-Di-Gmp
gi|304445919|pdb|3MUV|P Chain P, Crystal Structure Of The G20aC92U MUTANT C-Di-Gmp
Riboswith Bound To C-Di-Amp
gi|304445933|pdb|3MXH|P Chain P, Native Structure Of A C-Di-Gmp Riboswitch From V. Cholerae
gi|327533656|pdb|3P49|B Chain B, Crystal Structure Of A Glycine Riboswitch From
Fusobacterium Nucleatum
gi|345110840|pdb|3R1H|A Chain A, Crystal Structure Of The Class I Ligase Ribozyme-Substrate
Preligation Complex, C47u Mutant, Ca2+ Bound
gi|345110843|pdb|3R1H|D Chain D, Crystal Structure Of The Class I Ligase Ribozyme-Substrate
Preligation Complex, C47u Mutant, Ca2+ Bound
gi|345110846|pdb|3R1L|A Chain A, Crystal Structure Of The Class I Ligase Ribozyme-Substrate
Preligation Complex, C47u Mutant, Mg2+ Bound
gi|345110849|pdb|3R1L|D Chain D, Crystal Structure Of The Class I Ligase Ribozyme-Substrate
Preligation Complex, C47u Mutant, Mg2+ Bound
gi|367460217|pdb|3UCU|P Chain P, The C-Di-Gmp-I Riboswitch Bound To Pgpg
gi|367460220|pdb|3UCZ|P Chain P, The C-Di-Gmp-I Riboswitch Bound To Gpg
gi|367460223|pdb|3UD3|P Chain P, The C92u Mutant C-Di-Gmp-I Riboswitch Bound To Pgpa
gi|367460226|pdb|3UD4|P Chain P, The C92u Mutant C-Di-Gmp-I Riboswitch Bound To Gpa
Length = 98
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQ----FLRFGELESVAFQ---PGRSYAFINFKIEEDA 81
T P+ +++ NL+ I++ L F RFG++ + R AF+ FK A
Sbjct: 6 TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSA 65
Query: 82 IASMKALQGFPLAGNPLRIEFAKA 105
+++++QGFP P+RI++AK
Sbjct: 66 TNALRSMQGFPFYDKPMRIQYAKT 89
>gi|410982020|ref|XP_003997362.1| PREDICTED: THO complex subunit 4 [Felis catus]
Length = 220
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQ 89
L V NL + +A++ + F FG L+ A RS A ++F+ + DA+ +MK
Sbjct: 71 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 130
Query: 90 GFPLAGNPLRIEFAKA 105
G PL G P+ I+ +
Sbjct: 131 GVPLDGRPMNIQLVTS 146
>gi|355778434|gb|EHH63470.1| hypothetical protein EGM_16442, partial [Macaca fascicularis]
Length = 366
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-- 65
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 169 EKNRLAAMANNLQKGSGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 222
Query: 66 --PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 223 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 261
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGE-LESVAFQP-----GRSYAFINFKIEEDAIA 83
P L+VGNL+ + +L F +FG+ ++++ Q R + FI FK E DA
Sbjct: 5 PAGGKLFVGNLAWTTDSGSLKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEADAPG 64
Query: 84 SMKALQGFPLAGNPLRIEFAKA 105
+++AL G L G +R+ +A +
Sbjct: 65 AIEALNGQELDGREIRVNYANS 86
>gi|222637670|gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
Length = 338
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 25 GRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-PGR--SYAFINFKIEEDA 81
GR + SR ++VGNL +I E + D F ++G + + + P R +AF+ F+ DA
Sbjct: 65 GRMSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGFAFVEFEDPRDA 124
Query: 82 IASMKALQGFPLAGNPLRIEFA 103
+++ G+ GN LR+E A
Sbjct: 125 EDAIRGRDGYNFDGNRLRVELA 146
>gi|159463554|ref|XP_001690007.1| SR protein factor [Chlamydomonas reinhardtii]
gi|158283995|gb|EDP09745.1| SR protein factor [Chlamydomonas reinhardtii]
Length = 338
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 34 HLWVGNLSHNIEEANLTDQFLRFGELESVAFQPG---RSYAFINFKIEEDAIASMKALQG 90
++VGNL ++ E + D F ++G + SV + G ++AF+ F+ E DA +++ G
Sbjct: 5 RVFVGNLPMDVREREVEDLFFKYGRIRSVDLKIGPRPPAFAFVEFEDERDAADAVRGRDG 64
Query: 91 FPLAGNPLRIEFA 103
G LR+E +
Sbjct: 65 IEFQGQRLRVEVS 77
>gi|149756180|ref|XP_001494897.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Equus
caballus]
Length = 430
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 231 EKNRLAAMANNLQKGSGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 285 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 323
>gi|71666555|ref|XP_820235.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70885572|gb|EAN98384.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 746
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 42/75 (56%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+ LW+G+L + L + F FG++++++ R+ AFI+F+ ED ++ ++
Sbjct: 304 PTNVLWLGDLPPTVSNEELNENFKVFGKIKTISRLDSRNMAFIHFETIEDCTQALDLMRD 363
Query: 91 FPLAGNPLRIEFAKA 105
P+ G + + + +A
Sbjct: 364 QPIGGARVVLNYGRA 378
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 31 PSRHLWVGNLS-HNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKAL 88
P+ +WVGNL H E L +F FG + +A P +SY F++F+ E+A +++AL
Sbjct: 183 PTNTVWVGNLDLHEHTEEVLRSEFSEFGRVIRIARVPDKSYCFVHFRYVEEARNAVEAL 241
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%)
Query: 24 GGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIA 83
G N P+ +++G L+ ++ E ++ D F F + F AF +F E A A
Sbjct: 393 GIPVNETPTNVVYLGQLASDVTEGDVEDLFEPFEGFINSKFIQSSGIAFGHFDSIEHARA 452
Query: 84 SMKALQGFPLAGNPLRIEFAKA 105
+ AL L G PLRI F K+
Sbjct: 453 ARIALNNALLRGAPLRISFGKS 474
>gi|444518692|gb|ELV12325.1| Putative RNA-binding protein 3 [Tupaia chinensis]
Length = 154
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFINFKIEEDAIASMKAL 88
L+VG L+ N +E L D F FG + V Q R + FI F E A +M+A+
Sbjct: 8 LFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRAM 67
Query: 89 QGFPLAGNPLRIEFA 103
G L G +R++ A
Sbjct: 68 NGESLDGRQIRVDHA 82
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 209 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 262
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF L G P+++
Sbjct: 263 SETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKV 301
>gi|354548311|emb|CCE45047.1| hypothetical protein CPAR2_700510 [Candida parapsilosis]
Length = 272
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P++ L+V + ++ E +L + F + V G YAF++F+ E++A A++K + G
Sbjct: 5 PTKQLFVRPIRDDVREDDLIEFFSTAAPVVEVRLMQG--YAFVSFQTEDEADAALKKMDG 62
Query: 91 FPLAGNPLRIEFAK 104
L G L++EFAK
Sbjct: 63 QELNGEQLQVEFAK 76
>gi|346464627|gb|AEO32158.1| hypothetical protein [Amblyomma maculatum]
Length = 199
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIE----EANLTDQFLRFGE-LESVAFQP--GRSYAFI 73
+ GG PP+ L++ NL+ I + +L F ++G LE +AF+ + A++
Sbjct: 5 TTGGDAPTVPPNMTLYINNLNEKINLNELKKSLRAVFSQYGNILEVLAFKTLKHKGQAWV 64
Query: 74 NFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
F+ A ++K +QGFP P+RI++AK
Sbjct: 65 VFEDVSKASEALKQMQGFPFYDKPMRIQYAKT 96
>gi|149756178|ref|XP_001494868.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Equus
caballus]
Length = 446
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 247 EKNRLAAMANNLQKGSGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 300
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 301 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 339
>gi|312379595|gb|EFR25817.1| hypothetical protein AND_08500 [Anopheles darlingi]
Length = 836
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 36 WVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQG 90
V NL + E ++ + F FG L+S + RS A + F+ + DAI +MK G
Sbjct: 691 MVSNLDFGVSETDINELFAEFGPLKSASVHYDRSGRSLGTADVIFERKSDAIKAMKQYNG 750
Query: 91 FPLAGNPLRIEFAKA 105
PL G P+ I+ A +
Sbjct: 751 VPLDGRPMSIQLATS 765
>gi|261191117|ref|XP_002621967.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239591011|gb|EEQ73592.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239613076|gb|EEQ90063.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
Length = 253
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-YAFINFKIEEDAIASMKAL 88
PP++ L++ + ++++ LT+ F RF + V PGR AF+ ++ E AI++ +A
Sbjct: 175 PPNKILFLREIPDSLDQDGLTEIFGRFEGFKEVRMVPGRKGIAFVEYEAETGAISAKEAT 234
Query: 89 QGFPLA--GNPLRIEF 102
G PL G P+R+ F
Sbjct: 235 SGMPLGENGKPIRVTF 250
>gi|260812203|ref|XP_002600810.1| hypothetical protein BRAFLDRAFT_229350 [Branchiostoma floridae]
gi|229286100|gb|EEN56822.1| hypothetical protein BRAFLDRAFT_229350 [Branchiostoma floridae]
Length = 477
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVA-FQPGRSYAFINFKIEEDAIASMKALQGFPL 93
L+V NL E ++ F GE E+V + R YAF+++K EDAIA+M A+ G L
Sbjct: 234 LYVRNLMVTTTEDDIKQAF-EVGEEETVTRVKKIRDYAFVHYKTREDAIAAMTAMNGSTL 292
Query: 94 AGNPLRIEFAK 104
G L + FAK
Sbjct: 293 EGAKLEVTFAK 303
>gi|426241412|ref|XP_004014585.1| PREDICTED: RNA-binding protein 39 isoform 6 [Ovis aries]
gi|426241416|ref|XP_004014587.1| PREDICTED: RNA-binding protein 39 isoform 8 [Ovis aries]
Length = 373
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 74 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 127
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF L G P+++
Sbjct: 128 SETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKV 166
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--- 64
E+ R + G G P R L+VG+L NI E L F FG +ES+
Sbjct: 231 EKNRAAAMANNLQKGSAG-----PMR-LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMD 284
Query: 65 -QPGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
+ GRS Y FI F E A +++ L GF L G P+++
Sbjct: 285 SETGRSKGYGFITFSDSECAKKALEQLNGFELTGRPMKV 323
>gi|159163861|pdb|2CQB|A Chain A, Solution Structure Of The Rna Recognition Motif In
Peptidyl- Prolyl Cis-Trans Isomerase E
Length = 102
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF------QPGRSYAFIN 74
SG G A T R L+VG L+ +++ L F+ FG++ + + R +AF+
Sbjct: 3 SGSSGMATT--KRVLYVGGLAEEVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVE 60
Query: 75 FKIEEDAIASMKALQGFPLAGNPLRIEFAK 104
F++ EDA A++ + L G +R+ AK
Sbjct: 61 FELAEDAAAAIDNMNESELFGRTIRVNLAK 90
>gi|10880789|gb|AAG24388.1|AF275678_1 PP239 protein [Homo sapiens]
Length = 418
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-- 65
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 222 EKNRLAAMANNLQKGNGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 275
Query: 66 --PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 276 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 314
>gi|134084288|emb|CAK43175.1| unnamed protein product [Aspergillus niger]
Length = 255
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 30 PPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-YAFINFKIEEDAIASMKAL 88
PP++ L++ +L ++ +LT F RF + V PGR AF+ ++ E AI++ +A
Sbjct: 177 PPNKILFLRDLPDTADQDSLTAVFGRFEGFQEVRLVPGRKGIAFVEYENESGAISAKEAT 236
Query: 89 QGFPL--AGNPLRIEFAK 104
G P+ AG P+R+ + +
Sbjct: 237 SGMPMGEAGKPIRVTYQR 254
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF-------QPGRSYAFINFKIEEDAIA 83
PS L++GNLS N + N+ + F +FGE+ SV QP + + ++ + +DA
Sbjct: 275 PSDTLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQP-KGFGYVQYTSIDDAKK 333
Query: 84 SMKALQGFPLAGNPLRIEFA 103
+++ALQG + P+R++++
Sbjct: 334 ALEALQGEYIDNRPVRLDYS 353
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 25 GRANTP---PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS------YAFINF 75
GR P P+ L++GNLS N+ E + + F ++G+L SV F R + ++ +
Sbjct: 270 GRKEAPQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSVRFPTDRDTGAFKGFGYVEY 329
Query: 76 KIEEDAIASMKALQGFPLAGNPLRIEFA 103
E A +++ L G +AG LR+++A
Sbjct: 330 GDVETAQKAVEGLNGVEIAGRSLRLDYA 357
Score = 34.7 bits (78), Expect = 6.9, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRSYAFINFKIEE-D 80
+ P + ++VGNLS N++E L F G +ES + GR+ F E D
Sbjct: 176 KTEEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESAD 235
Query: 81 AIASMKALQGFPLAGNPLRIEFA 103
A+ + AL G L G +R++ +
Sbjct: 236 ALTAAMALTGTELDGREIRVDVS 258
>gi|281500860|pdb|3K0J|A Chain A, Crystal Structure Of The E. Coli Thim Riboswitch In
Complex With Thiamine Pyrophosphate And The U1a
Crystallization Module
gi|281500861|pdb|3K0J|B Chain B, Crystal Structure Of The E. Coli Thim Riboswitch In
Complex With Thiamine Pyrophosphate And The U1a
Crystallization Module
gi|281500862|pdb|3K0J|C Chain C, Crystal Structure Of The E. Coli Thim Riboswitch In
Complex With Thiamine Pyrophosphate And The U1a
Crystallization Module
gi|281500863|pdb|3K0J|D Chain D, Crystal Structure Of The E. Coli Thim Riboswitch In
Complex With Thiamine Pyrophosphate And The U1a
Crystallization Module
Length = 96
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 29 TPPSRHLWVGNLSHNIEEANLTDQ----FLRFGELESVAFQ---PGRSYAFINFKIEEDA 81
T P+ +++ NL+ I++ L F RFG++ + R AF+ FK A
Sbjct: 5 TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSA 64
Query: 82 IASMKALQGFPLAGNPLRIEFAKA 105
+++++QGFP P+RI++AK
Sbjct: 65 TNALRSMQGFPFYDKPMRIQYAKT 88
>gi|427781753|gb|JAA56328.1| Putative tho complex subunit 4 [Rhipicephalus pulchellus]
Length = 251
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 15/106 (14%)
Query: 14 RFEDRTHSGGGGR---------ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF 64
R++ + G GGR A PS+ L V NL + + +A++ + F FG L A
Sbjct: 80 RWQHDMYDGVGGRRALTGGLGGAGMGPSK-LLVSNLDYGVSDADIKELFAEFGPLRKAAV 138
Query: 65 QPGRS-----YAFINFKIEEDAIASMKALQGFPLAGNPLRIEFAKA 105
RS A + F+ DA+ +MK G PL G P+ I+ +
Sbjct: 139 HYDRSGRSLGTADVVFERRTDAVRAMKQYNGVPLDGRPMNIQLVTS 184
>gi|261189994|ref|XP_002621407.1| pumilio-family RNA binding repeat-containing protein [Ajellomyces
dermatitidis SLH14081]
gi|239591235|gb|EEQ73816.1| pumilio-family RNA binding repeat-containing protein [Ajellomyces
dermatitidis SLH14081]
gi|239606295|gb|EEQ83282.1| RNA binding protein Jsn1 [Ajellomyces dermatitidis ER-3]
gi|327353132|gb|EGE81989.1| RNA binding protein Jsn1 [Ajellomyces dermatitidis ATCC 18188]
Length = 1243
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 12/105 (11%)
Query: 5 GGRERFRGGR-FEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVA 63
GG + R G+ D T+ G P+R LW+G++ + +L F +G++ES
Sbjct: 456 GGMQSLRQGQEMVDETNLDG-------PTRALWIGSIPVSTTVTSLDAIFNVYGKIESTR 508
Query: 64 FQPGRSYAFINFKIEEDAIASMKALQG---FPLAGNPLRIEFAKA 105
++ F+NF+ E AI + L G FP AG P+RI +AK
Sbjct: 509 VLTHKNCGFVNFERVESAIQANSLLNGKEIFPGAG-PVRIGYAKV 552
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEEDAIASMKAL 88
L+VG+L NI E L F FG+++++ GRS Y FI F E A +++ L
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 89 QGFPLAGNPLRI 100
GF LAG P+R+
Sbjct: 325 NGFELAGRPMRV 336
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-- 65
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 245 EKNRLAAMANNLQKGSGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 298
Query: 66 --PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 299 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 337
>gi|323346845|gb|EGA81124.1| Nop13p [Saccharomyces cerevisiae Lalvin QA23]
Length = 352
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 27 ANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESV---AFQPG---RSYAFINFKIEED 80
+ PPSR L+VGNLS ++ + L F G++ + F+ + +AFI+FK EE
Sbjct: 233 SKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEG 292
Query: 81 AIASMKALQGFPLAGNPLRIE 101
+ ++K +AG PLR+E
Sbjct: 293 STNALKDKSCRKIAGRPLRME 313
>gi|410961884|ref|XP_003987508.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Felis catus]
Length = 411
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-- 65
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 211 EKNRLAAMANNLQKGSGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 264
Query: 66 --PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 265 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 303
>gi|410961882|ref|XP_003987507.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Felis catus]
Length = 429
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 12/99 (12%)
Query: 8 ERFRGGRFEDRTHSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQ-- 65
E+ R + G GG P R L+VG+L NI E L F FG+++++
Sbjct: 229 EKNRLAAMANNLQKGSGG-----PMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKD 282
Query: 66 --PGRS--YAFINFKIEEDAIASMKALQGFPLAGNPLRI 100
GRS Y FI F E A +++ L GF LAG P+R+
Sbjct: 283 SDTGRSKGYGFITFSDSECARRALEQLNGFELAGRPMRV 321
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 21 SGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINF 75
S G G NT L++G L +I E L F FG+++++ S YA++ F
Sbjct: 257 SLGFGPTNTTGPLKLYIGQLHTSITEDMLRRIFEPFGKIDTLEIATDLSGVSKGYAYVTF 316
Query: 76 KIEEDAIASMKALQGFPLAGNPLRI 100
+ +DA +M+ + GF LAG P+++
Sbjct: 317 RHADDAKRAMEQMNGFELAGRPMKV 341
>gi|221221906|gb|ACM09614.1| THO complex subunit 4 [Salmo salar]
Length = 263
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQ 89
L V NL + +A++ + F FG L+ A RS A ++F+ + DA+ +MK
Sbjct: 115 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 174
Query: 90 GFPLAGNPLRIEFAKA 105
G PL G P+ I+ +
Sbjct: 175 GVPLDGRPMNIQLVTS 190
>gi|37805819|dbj|BAC99315.1| Nop132 [Homo sapiens]
Length = 1167
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG LS +I EA+L +QF RFGE+ V P + +A+IN + E D
Sbjct: 7 TKRLYVGGLSQDISEADLQNQFSRFGEVSDVEIITRKDDQGNPQKVFAYINISVAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
+ L G L+I+ AK
Sbjct: 67 KCISVLNKTKWKGGTLQIQLAK 88
>gi|385302315|gb|EIF46452.1| mrna binding post-transcriptional regulator [Dekkera bruxellensis
AWRI1499]
Length = 207
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 20 HSGGGGRANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEE 79
+SGG NT ++VG ++ ++ E L F FG++ +V PG+ F+ F E
Sbjct: 55 YSGGQDPNNT----TVFVGGINSSVSEDALRSLFDPFGDIVNVCVPPGKGCGFVRFTTHE 110
Query: 80 DAIASMKALQGFPLAGNPLRIEFAKA 105
A ++ +QGF L G+ +R+ + ++
Sbjct: 111 SAQQAVNEMQGFVLGGSRIRLRWGRS 136
>gi|350581943|ref|XP_003354722.2| PREDICTED: nucleolar protein 8 [Sus scrofa]
Length = 1009
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 32 SRHLWVGNLSHNIEEANLTDQFLRFGELESVAF--------QPGRSYAFINFKI-EEDAI 82
++ L+VG L NI E +L +QF RFGE+ V P + +A++N +I E D
Sbjct: 7 TKRLFVGGLGQNISEGDLQNQFNRFGEVSDVEIITRKDDQGNPQKVFAYVNIRIAEADLK 66
Query: 83 ASMKALQGFPLAGNPLRIEFAK 104
M L G L+I+ AK
Sbjct: 67 KCMSVLNKTKWKGGTLQIQLAK 88
>gi|403280751|ref|XP_003945202.1| PREDICTED: LOW QUALITY PROTEIN: THO complex subunit 4 [Saimiri
boliviensis boliviensis]
Length = 230
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQ 89
L V NL + +A++ + F FG L+ A RS A ++F+ + DA+ +MK
Sbjct: 81 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 140
Query: 90 GFPLAGNPLRIEFAKA 105
G PL G P+ I+ +
Sbjct: 141 GVPLDGRPMNIQLVTS 156
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 26 RANTPPSRHLWVGNLSHNIEEANLTDQFLRFGELESVAF----QPGRS--YAFINFKIEE 79
+ T P R L+VG+L NI E L F FG+++++ + GRS Y F+ F+ +
Sbjct: 240 KGQTGPMR-LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDPETGRSKGYGFLTFRNAD 298
Query: 80 DAIASMKALQGFPLAGNPLRI 100
DA +++ L GF LAG P+++
Sbjct: 299 DAKKALEQLNGFELAGRPMKV 319
>gi|258574087|ref|XP_002541225.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901491|gb|EEP75892.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 1132
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 31 PSRHLWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRSYAFINFKIEEDAIASMKALQG 90
P+R LW+G++ + +L F +G++ES ++ F+NF+ E AI + L G
Sbjct: 408 PTRALWIGSIPVSTTVTSLDAIFSMYGKIESTRVLTHKNCGFVNFERVESAIQAKSLLNG 467
Query: 91 ---FPLAGNPLRIEFAKA 105
FP AG P+RI +AK
Sbjct: 468 KEIFPGAG-PVRIGYAKV 484
>gi|157311703|ref|NP_001098578.1| THO complex subunit 4 [Danio rerio]
gi|156230508|gb|AAI51965.1| Zgc:171753 protein [Danio rerio]
Length = 280
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 35 LWVGNLSHNIEEANLTDQFLRFGELESVAFQPGRS-----YAFINFKIEEDAIASMKALQ 89
L V NL + +A++ + F FG L+ A RS A ++F+ + DA+ +MK
Sbjct: 127 LLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYN 186
Query: 90 GFPLAGNPLRIEFAKA 105
G PL G P+ I+ +
Sbjct: 187 GVPLDGRPMNIQLVTS 202
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.139 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,848,974,660
Number of Sequences: 23463169
Number of extensions: 73422456
Number of successful extensions: 216201
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2733
Number of HSP's successfully gapped in prelim test: 8764
Number of HSP's that attempted gapping in prelim test: 203188
Number of HSP's gapped (non-prelim): 18504
length of query: 105
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 32
effective length of database: 6,351,416,734
effective search space: 203245335488
effective search space used: 203245335488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)