Your job contains 1 sequence.
>036555
MNGIERRRRVWQNLKQRLRLKGMGCCGSMWSFRTQTLTIMPRQEEEEEEPEEQERGTHVR
MHMRNAAASVTAAGAGTTINMNLAMALAAERNLRSGDGLVVPKKNAAGTAVKTLMMLIEE
TDGGDWQMKKDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLN
RGTCPICNRSIIEILDIF
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036555
(198 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504955313 - symbol:AT4G03965 species:3702 "Ara... 302 6.3e-35 2
TAIR|locus:2132016 - symbol:AT4G22250 species:3702 "Arabi... 336 1.8e-30 1
TAIR|locus:2027094 - symbol:AT1G62370 species:3702 "Arabi... 268 5.3e-30 2
TAIR|locus:2086949 - symbol:AT3G25030 species:3702 "Arabi... 276 8.4e-28 2
TAIR|locus:2123216 - symbol:AT4G13100 species:3702 "Arabi... 269 9.4e-27 2
TAIR|locus:2098515 - symbol:AT3G07120 species:3702 "Arabi... 199 1.7e-18 2
TAIR|locus:2082440 - symbol:LUL4 "LOG2-LIKE UBIQUITIN LIG... 128 1.1e-07 1
TAIR|locus:2184407 - symbol:AT5G04460 species:3702 "Arabi... 118 1.7e-05 2
UNIPROTKB|A2AAZ4 - symbol:TRIM39 "E3 ubiquitin-protein li... 99 2.5e-05 1
ZFIN|ZDB-GENE-081030-14 - symbol:trim35-37 "tripartite mo... 115 5.1e-05 1
ZFIN|ZDB-GENE-081030-6 - symbol:trim35-38 "tripartite mot... 115 5.9e-05 1
UNIPROTKB|Q5ZM74 - symbol:RNF141 "RING finger protein 141... 108 0.00015 1
TAIR|locus:4515103444 - symbol:AT4G24204 species:3702 "Ar... 105 0.00016 1
UNIPROTKB|F1NHH0 - symbol:RNF185 "E3 ubiquitin-protein li... 92 0.00018 1
UNIPROTKB|E9PN08 - symbol:RNF5 "E3 ubiquitin-protein liga... 92 0.00018 1
RGD|1303154 - symbol:rnf141 "ring finger protein 141" spe... 107 0.00020 1
UNIPROTKB|Q6IV57 - symbol:Rnf141 "RING finger protein 141... 107 0.00020 1
UNIPROTKB|A2AAZ5 - symbol:TRIM39 "E3 ubiquitin-protein li... 99 0.00023 1
UNIPROTKB|A2AE50 - symbol:TRIM26 "Tripartite motif-contai... 91 0.00023 1
UNIPROTKB|H0YAI5 - symbol:RNF4 "E3 ubiquitin-protein liga... 91 0.00023 1
UNIPROTKB|I3LA46 - symbol:I3LA46 "Uncharacterized protein... 106 0.00025 1
UNIPROTKB|F1PXY5 - symbol:F1PXY5 "Uncharacterized protein... 107 0.00028 1
UNIPROTKB|H0Y340 - symbol:RFWD2 "E3 ubiquitin-protein lig... 90 0.00031 1
ZFIN|ZDB-GENE-030131-2628 - symbol:mex3b "mex-3 homolog B... 110 0.00038 1
UNIPROTKB|D6RAS2 - symbol:TRIM60 "Tripartite motif-contai... 89 0.00040 1
UNIPROTKB|E9PMW5 - symbol:TRIM3 "Tripartite motif-contain... 89 0.00040 1
RGD|1561238 - symbol:RGD1561238 "similar to ring finger p... 89 0.00040 1
MGI|MGI:3039616 - symbol:Znrf3 "zinc and ring finger 3" s... 112 0.00041 1
TAIR|locus:2162504 - symbol:RAD5 species:3702 "Arabidopsi... 112 0.00042 2
UNIPROTKB|E1BST1 - symbol:PEX10 "Uncharacterized protein"... 107 0.00044 1
TAIR|locus:4515102961 - symbol:APD4 "ABERRANT POLLEN DEVE... 108 0.00046 1
TAIR|locus:2042922 - symbol:APD3 "ABERRANT POLLEN DEVELOP... 108 0.00047 1
TAIR|locus:2200301 - symbol:AT1G68070 species:3702 "Arabi... 107 0.00048 1
TAIR|locus:2044752 - symbol:EDA18 "embryo sac development... 110 0.00049 1
ZFIN|ZDB-GENE-050522-17 - symbol:trim35-1 "tripartite mot... 109 0.00049 1
UNIPROTKB|Q32L15 - symbol:RNF141 "RING finger protein 141... 104 0.00054 1
UNIPROTKB|F1Q4F0 - symbol:RNF141 "RING finger protein 141... 104 0.00054 1
UNIPROTKB|Q8WVD5 - symbol:RNF141 "RING finger protein 141... 104 0.00054 1
MGI|MGI:1914400 - symbol:Rnf141 "ring finger protein 141"... 104 0.00054 1
UNIPROTKB|Q2XNS1 - symbol:RNF141 "RING finger protein 141... 104 0.00055 1
UNIPROTKB|H7C5V9 - symbol:LONRF1 "LON peptidase N-termina... 107 0.00056 1
ZFIN|ZDB-GENE-091113-36 - symbol:trim35-10 "tripartite mo... 108 0.00057 1
ZFIN|ZDB-GENE-060825-103 - symbol:zgc:153151 "zgc:153151"... 108 0.00059 1
CGD|CAL0005267 - symbol:orf19.2105 species:5476 "Candida ... 103 0.00061 1
ZFIN|ZDB-GENE-040625-71 - symbol:rnf141 "ring finger prot... 103 0.00066 1
UNIPROTKB|F1MGD1 - symbol:RNF135 "Uncharacterized protein... 107 0.00068 1
TAIR|locus:1006230720 - symbol:AT1G24580 species:3702 "Ar... 87 0.00069 1
UNIPROTKB|E5RGB3 - symbol:TRIM35 "Tripartite motif-contai... 104 0.00076 1
WB|WBGene00017342 - symbol:F10D7.5 species:6239 "Caenorha... 108 0.00086 1
TAIR|locus:2202882 - symbol:ZCF61 species:3702 "Arabidops... 105 0.00087 1
UNIPROTKB|D6RAH9 - symbol:LNX1 "E3 ubiquitin-protein liga... 86 0.00090 1
UNIPROTKB|D6RB76 - symbol:LNX1 "E3 ubiquitin-protein liga... 86 0.00090 1
TAIR|locus:2059359 - symbol:COP1 "CONSTITUTIVE PHOTOMORPH... 108 0.00096 1
UNIPROTKB|K7GT21 - symbol:XIAP "Uncharacterized protein" ... 102 0.00097 1
UNIPROTKB|I3LDC9 - symbol:RNF141 "Uncharacterized protein... 102 0.00098 1
>TAIR|locus:504955313 [details] [associations]
symbol:AT4G03965 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000015147
ProtClustDB:CLSN2715025 EMBL:AY735635 EMBL:AY773886 IPI:IPI00539382
RefSeq:NP_680579.2 UniGene:At.51014 ProteinModelPortal:Q5XV87
SMR:Q5XV87 EnsemblPlants:AT4G03965.1 GeneID:825707
KEGG:ath:AT4G03965 TAIR:At4g03965 eggNOG:NOG294889 OMA:NYRTEET
PhylomeDB:Q5XV87 Genevestigator:Q5XV87 Uniprot:Q5XV87
Length = 209
Score = 302 (111.4 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 65/123 (52%), Positives = 86/123 (69%)
Query: 81 MNLAMALAAERNLRSGDGLVVPKKNAAGTAVK-TLMMLIEETDGGDWQMKKDGDVE---G 136
MNLA ALAAERN R+ + + + + T +K +LM L+EET + + ++ + E
Sbjct: 93 MNLATALAAERNYRTEE----TEASGSLTPLKVSLMRLLEET--AERVVVEENETERVTA 146
Query: 137 GEVLTLRE-GSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGTCPICNRSIIEIL 195
T+R +D +CCVCM R KGAAFIPCGHTFCRVCSR++WLNRG+CP+CNR IIEIL
Sbjct: 147 SASSTVRGVNNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEIL 206
Query: 196 DIF 198
DI+
Sbjct: 207 DIY 209
Score = 92 (37.4 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 1 MNGIERRRRVWQNLKQRLRLKGMGCCGSMWSFRTQTLT 38
M+G++R RR + LK+RL K +GCCG W R + T
Sbjct: 29 MDGLDRSRRRKRTLKERLGFKRIGCCGPTWGLRLTSNT 66
>TAIR|locus:2132016 [details] [associations]
symbol:AT4G22250 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089
SMART:SM00184 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000015147
ProtClustDB:CLSN2715025 EMBL:BT005602 EMBL:AK118292 IPI:IPI00531872
RefSeq:NP_193956.2 UniGene:At.32554 ProteinModelPortal:Q8GXD8
SMR:Q8GXD8 IntAct:Q8GXD8 EnsemblPlants:AT4G22250.1 GeneID:828320
KEGG:ath:AT4G22250 TAIR:At4g22250 InParanoid:Q8GXD8 OMA:ETHRTTT
PhylomeDB:Q8GXD8 Genevestigator:Q8GXD8 Uniprot:Q8GXD8
Length = 214
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 85/201 (42%), Positives = 110/201 (54%)
Query: 1 MNGIERRRRVWQNLKQRLRLKGMGCCGSMWSFRTQTLTIMXXXXXXXXXXXXXXXGTHVR 60
M+G + RR + LK+RLR K +GCCG W+ R T + T +
Sbjct: 31 MSGHDLTRRK-RTLKERLRFKCIGCCGPTWNLRLTNNTTLHSPTSRDDEIEELQIETGLV 89
Query: 61 MHMRNXXXXXXXXXXXXXINMNLAMALAAERNLRSGDGLVVPKKNAAGTAVKTLMMLIEE 120
+ + MNLA AL AER R G+ + + V +LM L+EE
Sbjct: 90 LESDHGSGT----------GMNLATALEAERYNR-GESTEA-EADMTPRRV-SLMRLLEE 136
Query: 121 TDGGDWQMKKDG---DVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDL 177
T + + DG ++ + TL G+D +CCVCM R KGAAFIPCGHTFCRVCSR+L
Sbjct: 137 T--AEKIVDDDGKETEILTASIGTLT-GNDSVCCVCMGRKKGAAFIPCGHTFCRVCSREL 193
Query: 178 WLNRGTCPICNRSIIEILDIF 198
WLNRG+CP+CNR IIEILDIF
Sbjct: 194 WLNRGSCPLCNRPIIEILDIF 214
>TAIR|locus:2027094 [details] [associations]
symbol:AT1G62370 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
EMBL:AC003113 Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00516927
PIR:T01447 RefSeq:NP_176427.1 UniGene:At.50659
ProteinModelPortal:O48801 SMR:O48801 PRIDE:O48801
EnsemblPlants:AT1G62370.1 GeneID:842535 KEGG:ath:AT1G62370
TAIR:At1g62370 eggNOG:NOG238699 HOGENOM:HOG000015147
InParanoid:O48801 OMA:DQINGGD PhylomeDB:O48801
ProtClustDB:CLSN2715025 Genevestigator:O48801 Uniprot:O48801
Length = 204
Score = 268 (99.4 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 59/117 (50%), Positives = 74/117 (63%)
Query: 82 NLAMALAAERNLRSGDGLVVPKKNAAGTAVKTLMMLIEETDGGDWQMKKDGDVEGGEVLT 141
NLA ALA ER V ++ A T V LM L+ E+DG D T
Sbjct: 108 NLAEALAEERLAH------VTEEETAVTKVP-LMRLLAESDGCD-------------STT 147
Query: 142 LREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGTCPICNRSIIEILDIF 198
G+D +CCVCM R KGAAFIPCGHT+CRVCSR++W+NRGTCP+CNRSI ++LD++
Sbjct: 148 TWLGNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 204
Score = 79 (32.9 bits), Expect = 5.3e-30, Sum P(2) = 5.3e-30
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 1 MNGIERRRRVWQNLKQRLRLKGMGCCGSMWSFR 33
+NG +R W LKQRLR +GCCG + R
Sbjct: 31 INGGDRTMSKWTTLKQRLRFDWVGCCGKPLTLR 63
>TAIR|locus:2086949 [details] [associations]
symbol:AT3G25030 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005516 "calmodulin binding"
evidence=TAS;IPI] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AP000412
HOGENOM:HOG000015147 EMBL:BT014945 EMBL:BT015397 IPI:IPI00545213
RefSeq:NP_001030762.1 RefSeq:NP_189139.1 UniGene:At.49651
UniGene:At.69421 ProteinModelPortal:Q9LJR9 SMR:Q9LJR9
EnsemblPlants:AT3G25030.1 EnsemblPlants:AT3G25030.2 GeneID:822094
KEGG:ath:AT3G25030 TAIR:At3g25030 eggNOG:NOG304417
InParanoid:Q9LJR9 OMA:VWISSNS PhylomeDB:Q9LJR9
ProtClustDB:CLSN2915353 Genevestigator:Q9LJR9 Uniprot:Q9LJR9
Length = 250
Score = 276 (102.2 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 55/118 (46%), Positives = 76/118 (64%)
Query: 81 MNLAMALAAERNLRSGDGLVVPKKNAAGTAVKTLMMLIEETDGGDWQMKKDGDVEGGEVL 140
+ L LA ER L + + P + A +LM L+EE +G + DG+ E EV
Sbjct: 136 IRLGAVLAEERALSAREE-ETPAEREVEPARMSLMELLEENEGQMSFVSVDGEAEE-EVA 193
Query: 141 TLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGTCPICNRSIIEILDIF 198
+ ++ CCVCM R+KGAAFIPCGHTFCR+CSR+LW+ RG CP+CN +I+E+LD+F
Sbjct: 194 AVT-AAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
Score = 50 (22.7 bits), Expect = 8.4e-28, Sum P(2) = 8.4e-28
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 6 RRRRVWQNLKQRLRLKGMGCCGSMW 30
R + W++L+++LRLK G S+W
Sbjct: 71 RDKTAWKSLREKLRLKRNG---SVW 92
>TAIR|locus:2123216 [details] [associations]
symbol:AT4G13100 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005516 "calmodulin binding" evidence=ISS]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00540452 RefSeq:NP_849372.2 UniGene:At.33415
ProteinModelPortal:F4JS86 SMR:F4JS86 PRIDE:F4JS86
EnsemblPlants:AT4G13100.2 GeneID:826924 KEGG:ath:AT4G13100
OMA:CNTAILQ PhylomeDB:F4JS86 ArrayExpress:F4JS86 Uniprot:F4JS86
Length = 265
Score = 269 (99.8 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 54/120 (45%), Positives = 76/120 (63%)
Query: 88 AAERNLRSGDGLVVPKKNAAGTAVKTLMMLIEETDGGDWQMKKDGDVE---------GGE 138
AAER R G V+ + +LM L+E+ DG +++ +VE GGE
Sbjct: 148 AAEREGRLRLGTVLAAEREPPRM--SLMELLEDNDGHMYELSARDEVEVEGRDGCDGGGE 205
Query: 139 VLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGTCPICNRSIIEILDIF 198
+ + ++ CCVCM R+KGAAFIPCGHTFCR+CSR+LW+ RG CP+CN +I+++LDIF
Sbjct: 206 AVAVTGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 265
Score = 47 (21.6 bits), Expect = 9.4e-27, Sum P(2) = 9.4e-27
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 5 ERRR--RVWQNLKQRLRLK 21
ERRR W++L+ +LRLK
Sbjct: 75 ERRRDKTAWKSLRDKLRLK 93
>TAIR|locus:2098515 [details] [associations]
symbol:AT3G07120 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012395 UniGene:At.71829
HOGENOM:HOG000015147 EMBL:BT020309 EMBL:BT020575 IPI:IPI00527034
RefSeq:NP_187368.1 UniGene:At.40398 ProteinModelPortal:Q9SFU2
SMR:Q9SFU2 IntAct:Q9SFU2 PRIDE:Q9SFU2 EnsemblPlants:AT3G07120.1
GeneID:819898 KEGG:ath:AT3G07120 TAIR:At3g07120 eggNOG:NOG246895
InParanoid:Q9SFU2 OMA:ERQMSAR PhylomeDB:Q9SFU2
ProtClustDB:CLSN2714677 Genevestigator:Q9SFU2 Uniprot:Q9SFU2
Length = 360
Score = 199 (75.1 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 36/79 (45%), Positives = 52/79 (65%)
Query: 120 ETDGGDWQMKKDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWL 179
E D D +++GD GG EG + CCVCM + KGA+F PCGHTFC++CS++L
Sbjct: 288 EEDEEDENNEEEGDSHGGG-----EG-ELSCCVCMVKIKGASFTPCGHTFCKLCSKELMA 341
Query: 180 NRGTCPICNRSIIEILDIF 198
+G CP+C+ ++E L+IF
Sbjct: 342 QKGHCPVCSSFVLEFLEIF 360
Score = 46 (21.3 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 8 RRVWQNLKQRLRLKGMGCCGSMWS 31
R WQ +++LRLK G S W+
Sbjct: 68 RTTWQIFREKLRLKRTG---SAWT 88
>TAIR|locus:2082440 [details] [associations]
symbol:LUL4 "LOG2-LIKE UBIQUITIN LIGASE4" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002686 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
EMBL:AC018907 HOGENOM:HOG000239918 eggNOG:NOG332026 EMBL:BT028998
EMBL:AY088059 IPI:IPI00539359 RefSeq:NP_566274.1 UniGene:At.27569
ProteinModelPortal:Q8LA32 SMR:Q8LA32 EnsemblPlants:AT3G06140.1
GeneID:819787 KEGG:ath:AT3G06140 TAIR:At3g06140 InParanoid:Q9M8K4
OMA:PNSISEQ Genevestigator:Q8LA32 Uniprot:Q8LA32
Length = 359
Score = 128 (50.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 100 VVPKKNAAGTAVKTLMMLIEETDGGDWQMKK-DGDVEGGEVLTLRE-GSDWMCCVCMERN 157
V+ K N VK + ++ +G +++++ G G L E GS C +CM
Sbjct: 251 VLEKDNDGSFKVKVVKQILW-IEGVRYELRELYGSTTQGAASGLDESGSGTECVICMTEA 309
Query: 158 KGAAFIPCGHT-FCRVCSRDLWLNRGTCPICNRSIIEILDI 197
K A +PC H C C+++L L CPIC + I E+L+I
Sbjct: 310 KDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLEI 350
>TAIR|locus:2184407 [details] [associations]
symbol:AT5G04460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00522537
RefSeq:NP_001190224.1 RefSeq:NP_196066.2 UniGene:At.33121
ProteinModelPortal:F4JWA1 SMR:F4JWA1 PRIDE:F4JWA1
EnsemblPlants:AT5G04460.1 EnsemblPlants:AT5G04460.3 GeneID:830324
KEGG:ath:AT5G04460 OMA:RSEIEWE ArrayExpress:F4JWA1 Uniprot:F4JWA1
Length = 863
Score = 118 (46.6 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 26/71 (36%), Positives = 35/71 (49%)
Query: 132 GDVEGGEVLTLREGSDWM------CCVCMERNKGAAFIPCGHTF-CRVCSRDLWLNRGTC 184
GD +G T +GS W CCVC + + A CGH C C+ +L N G C
Sbjct: 788 GD-QGMSAETSEDGSRWSHVSKGTCCVCCDNHIDALLYRCGHMCTCSKCANELVRNGGKC 846
Query: 185 PICNRSIIEIL 195
P+C IIE++
Sbjct: 847 PLCRAPIIEVI 857
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 80 NMNLAMALAAERNLRSGDG 98
N NL+ ++A+E L +G
Sbjct: 187 NTNLSSSIASESQLSENNG 205
>UNIPROTKB|A2AAZ4 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:AL662832 EMBL:AL662795 EMBL:AL773535
EMBL:BX294158 EMBL:CR759928 EMBL:BX927214 EMBL:CR759281
EMBL:BX248580 HGNC:HGNC:10065 IPI:IPI00790609 SMR:A2AAZ4
Ensembl:ENST00000412150 Ensembl:ENST00000418057
Ensembl:ENST00000426676 Ensembl:ENST00000438089
Ensembl:ENST00000440271 Ensembl:ENST00000447542
Ensembl:ENST00000450818 Uniprot:A2AAZ4
Length = 74
Score = 99 (39.9 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 150 CCVCMERNKGAAFIPCGHTFCRVCSRDLW--LNRG-TCPICNRS 190
C VC+E K I CGH FC+ C W L R CP+C ++
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKT 72
>ZFIN|ZDB-GENE-081030-14 [details] [associations]
symbol:trim35-37 "tripartite motif containing 35-37"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00336 Prosite:PS00518 ZFIN:ZDB-GENE-081030-14
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00680000099496 EMBL:CU137686 IPI:IPI00512555
Ensembl:ENSDART00000140241 Uniprot:E9QHI9
Length = 409
Score = 115 (45.5 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 147 DWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGT--CPICNR 189
D++C VC E K + C H+FC+ C + W N+ T CP+C R
Sbjct: 8 DYICPVCQEIFKTPVLLSCSHSFCKECLQQFWRNKNTQECPVCRR 52
>ZFIN|ZDB-GENE-081030-6 [details] [associations]
symbol:trim35-38 "tripartite motif containing 35-38"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-081030-6 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU137686 IPI:IPI00859170 Ensembl:ENSDART00000036309
Uniprot:E7F326
Length = 450
Score = 115 (45.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 147 DWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGT--CPICNR 189
D++C VC E K + C H+FC+ C + W N+ T CP+C R
Sbjct: 8 DYICPVCQEIFKTPVILSCSHSFCKECLQQFWRNKNTQECPVCRR 52
>UNIPROTKB|Q5ZM74 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OMA:MWMGRVK OrthoDB:EOG4GHZQ3 EMBL:AJ719510
IPI:IPI00597758 RefSeq:NP_001007926.1 UniGene:Gga.7687
ProteinModelPortal:Q5ZM74 SMR:Q5ZM74 Ensembl:ENSGALT00000009054
GeneID:423039 KEGG:gga:423039 InParanoid:Q5ZM74 NextBio:20825570
Uniprot:Q5ZM74
Length = 230
Score = 108 (43.1 bits), Expect = 0.00015, P = 0.00015
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 150 CCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRG-TCPICNRSI 191
CC+CM+ + +PC H+FC+ C D W +R +CP+C R +
Sbjct: 155 CCICMD-GRVDLILPCAHSFCQKCI-DKWSDRHRSCPVCRRQV 195
>TAIR|locus:4515103444 [details] [associations]
symbol:AT4G24204 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005634
"nucleus" evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 EMBL:CP002687 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL161561
IPI:IPI00892015 RefSeq:NP_001119040.1 UniGene:At.69248
ProteinModelPortal:B3H489 SMR:B3H489 EnsemblPlants:AT4G24204.3
GeneID:6240443 KEGG:ath:AT4G24204 TAIR:At4g24204
HOGENOM:HOG000064553 OMA:VICFEER PhylomeDB:B3H489
ProtClustDB:CLSN2708529 Genevestigator:B3H489 Uniprot:B3H489
Length = 178
Score = 105 (42.0 bits), Expect = 0.00016, P = 0.00016
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 132 GDVEGGEVLTLREGSDW--MCCVCMERNKGAAFIPCGHTF-CRVCSRDLWLNRG-TCPIC 187
GDVE + + D+ +C +C E + F+PCGH+ CR C++ + CPIC
Sbjct: 105 GDVETAS-FSSSDDVDYSTLCVICFEERRNCFFVPCGHSATCRGCAQRILSEESKVCPIC 163
Query: 188 NRSI 191
R I
Sbjct: 164 RRVI 167
>UNIPROTKB|F1NHH0 [details] [associations]
symbol:RNF185 "E3 ubiquitin-protein ligase RNF185"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000014107
EMBL:AADN02043215 EMBL:AADN02043216 IPI:IPI00590225
Ensembl:ENSGALT00000011275 ArrayExpress:F1NHH0 Uniprot:F1NHH0
Length = 117
Score = 92 (37.4 bits), Expect = 0.00018, P = 0.00018
Identities = 18/46 (39%), Positives = 22/46 (47%)
Query: 150 CCVCMERNKGAAFIPCGHTFCRVCSRDLWL----NRGTCPICNRSI 191
C +C++ K A CGH FC C WL NR CP+C I
Sbjct: 4 CNICLDTAKDAVISLCGHLFCWPCLHQ-WLETRPNRQVCPVCKAGI 48
>UNIPROTKB|E9PN08 [details] [associations]
symbol:RNF5 "E3 ubiquitin-protein ligase RNF5" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:BX284686 HGNC:HGNC:10068 IPI:IPI00514241
ProteinModelPortal:E9PN08 SMR:E9PN08 Ensembl:ENST00000472060
ArrayExpress:E9PN08 Bgee:E9PN08 Uniprot:E9PN08
Length = 91
Score = 92 (37.4 bits), Expect = 0.00018, P = 0.00018
Identities = 21/67 (31%), Positives = 30/67 (44%)
Query: 129 KKDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLN----RGTC 184
++DG EG G+ + C +C+E + A CGH +C C WL R C
Sbjct: 6 EEDGGPEGPNRERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQ-WLETRPERQEC 64
Query: 185 PICNRSI 191
P+C I
Sbjct: 65 PVCKAGI 71
>RGD|1303154 [details] [associations]
symbol:rnf141 "ring finger protein 141" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1303154
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OrthoDB:EOG4GHZQ3 EMBL:AY621087 IPI:IPI00192051
RefSeq:NP_001001800.1 UniGene:Rn.127990 ProteinModelPortal:Q6IV57
SMR:Q6IV57 PhosphoSite:Q6IV57 PRIDE:Q6IV57
Ensembl:ENSRNOT00000024561 GeneID:308900 KEGG:rno:308900
UCSC:RGD:1303154 NextBio:659756 ArrayExpress:Q6IV57
Genevestigator:Q6IV57 GermOnline:ENSRNOG00000017900 Uniprot:Q6IV57
Length = 230
Score = 107 (42.7 bits), Expect = 0.00020, P = 0.00020
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 119 EETDGGDWQMKK-DGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDL 177
EE DG + + G V L + + CC+CM+ + +PC H+FC+ C D
Sbjct: 125 EEPDGNPSSVTSCQASLWMGRVKQLTDEEE--CCICMD-GRADLILPCAHSFCQKCI-DK 180
Query: 178 WLNRG-TCPIC 187
W +R CPIC
Sbjct: 181 WSDRHRNCPIC 191
>UNIPROTKB|Q6IV57 [details] [associations]
symbol:Rnf141 "RING finger protein 141" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1303154 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 CTD:50862
eggNOG:NOG273394 GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OrthoDB:EOG4GHZQ3 EMBL:AY621087 IPI:IPI00192051
RefSeq:NP_001001800.1 UniGene:Rn.127990 ProteinModelPortal:Q6IV57
SMR:Q6IV57 PhosphoSite:Q6IV57 PRIDE:Q6IV57
Ensembl:ENSRNOT00000024561 GeneID:308900 KEGG:rno:308900
UCSC:RGD:1303154 NextBio:659756 ArrayExpress:Q6IV57
Genevestigator:Q6IV57 GermOnline:ENSRNOG00000017900 Uniprot:Q6IV57
Length = 230
Score = 107 (42.7 bits), Expect = 0.00020, P = 0.00020
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 119 EETDGGDWQMKK-DGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDL 177
EE DG + + G V L + + CC+CM+ + +PC H+FC+ C D
Sbjct: 125 EEPDGNPSSVTSCQASLWMGRVKQLTDEEE--CCICMD-GRADLILPCAHSFCQKCI-DK 180
Query: 178 WLNRG-TCPIC 187
W +R CPIC
Sbjct: 181 WSDRHRNCPIC 191
>UNIPROTKB|A2AAZ5 [details] [associations]
symbol:TRIM39 "E3 ubiquitin-protein ligase TRIM39"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR018957 InterPro:IPR000315
Pfam:PF00643 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00336 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOVERGEN:HBG001357 HOGENOM:HOG000234134
EMBL:AL662832 EMBL:AL662795 EMBL:AL773535 EMBL:BX294158
EMBL:CR759928 EMBL:BX927214 EMBL:CR759281 EMBL:BX248580
HGNC:HGNC:10065 IPI:IPI00796458 SMR:A2AAZ5 Ensembl:ENST00000411711
Ensembl:ENST00000416213 Ensembl:ENST00000424571
Ensembl:ENST00000430414 Ensembl:ENST00000453856
Ensembl:ENST00000456425 Ensembl:ENST00000458516 Uniprot:A2AAZ5
Length = 144
Score = 99 (39.9 bits), Expect = 0.00023, P = 0.00023
Identities = 18/44 (40%), Positives = 23/44 (52%)
Query: 150 CCVCMERNKGAAFIPCGHTFCRVCSRDLW--LNRG-TCPICNRS 190
C VC+E K I CGH FC+ C W L R CP+C ++
Sbjct: 29 CSVCLEYLKEPVIIECGHNFCKACITRWWEDLERDFPCPVCRKT 72
>UNIPROTKB|A2AE50 [details] [associations]
symbol:TRIM26 "Tripartite motif-containing protein 26"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL662832
EMBL:AL844220 EMBL:BX927221 EMBL:CR759838 EMBL:CR788282
EMBL:BX248419 EMBL:CR388382 EMBL:BX927189 HGNC:HGNC:12962
EMBL:AL662782 EMBL:AL671855 EMBL:AL845450 IPI:IPI00642517
SMR:A2AE50 Ensembl:ENST00000427612 Ensembl:ENST00000429583
Ensembl:ENST00000431641 Ensembl:ENST00000434785
Ensembl:ENST00000435387 Ensembl:ENST00000440149
Ensembl:ENST00000445457 Ensembl:ENST00000447942
HOGENOM:HOG000060139 HOVERGEN:HBG084408 Uniprot:A2AE50
Length = 122
Score = 91 (37.1 bits), Expect = 0.00023, P = 0.00023
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 150 CCVCMERNKGAAFIPCGHTFCRVCSRDLWL---NRGTCPICNR 189
C +C++ + I CGH FCR C+ D+ +R CP+C +
Sbjct: 16 CSICLDYLRDPVTIDCGHVFCRSCTTDVRPISGSRPVCPLCKK 58
>UNIPROTKB|H0YAI5 [details] [associations]
symbol:RNF4 "E3 ubiquitin-protein ligase RNF4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL110117 EMBL:AL645924
EMBL:BX322586 EMBL:CR450722 EMBL:CR545473 HGNC:HGNC:10067
ChiTaRS:RNF4 Ensembl:ENST00000508235 Uniprot:H0YAI5
Length = 106
Score = 91 (37.1 bits), Expect = 0.00023, P = 0.00023
Identities = 20/57 (35%), Positives = 24/57 (42%)
Query: 142 LREGSDWMCCVCMER-----NKGAAFIP--CGHTFCRVCSRDLWLNRGTCPICNRSI 191
LR C +CM+ G + CGH FC C RD N TCP C + I
Sbjct: 40 LRPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKI 96
>UNIPROTKB|I3LA46 [details] [associations]
symbol:I3LA46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 Ensembl:ENSSSCT00000026758 OMA:ITILMIF
Uniprot:I3LA46
Length = 218
Score = 106 (42.4 bits), Expect = 0.00025, P = 0.00025
Identities = 29/82 (35%), Positives = 39/82 (47%)
Query: 118 IEETDGGDWQMKKDGDVEG--GEVLTLREGSDWMCCVCMER---NKGAAFIPCGHTFCRV 172
+E+ + + K G EG G + TL S C +C+E+ + IPC H F R
Sbjct: 68 LEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRK 127
Query: 173 CSRDLWL-NRGTCPICNRSIIE 193
C D WL TCP C +IIE
Sbjct: 128 CV-DPWLLQHHTCPHCRHNIIE 148
>UNIPROTKB|F1PXY5 [details] [associations]
symbol:F1PXY5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR006573 Pfam:PF07177 PROSITE:PS51065
GeneTree:ENSGT00530000063117 OMA:KCPVCRW EMBL:AAEX03010895
Ensembl:ENSCAFT00000010560 Uniprot:F1PXY5
Length = 259
Score = 107 (42.7 bits), Expect = 0.00028, P = 0.00028
Identities = 28/86 (32%), Positives = 38/86 (44%)
Query: 108 GTAVKTLMMLIEETDGGDWQMKKDGDVEGGEV-LTLREGSDWMCCVCMERNKGAAFIPCG 166
GT K + +L+ ++ G WQ K G E T E C +C IPCG
Sbjct: 165 GTT-KAIQLLVHKSQG--WQAK--GTTPAPEAPATAGEA----CIICFHHAANTCLIPCG 215
Query: 167 HT-FCRVCSRDLWLNRGTCPICNRSI 191
HT FC C+ ++ + CPIC I
Sbjct: 216 HTHFCSYCAWRVFRDSAKCPICRWEI 241
>UNIPROTKB|H0Y340 [details] [associations]
symbol:RFWD2 "E3 ubiquitin-protein ligase RFWD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:AL359265 EMBL:AL162736
EMBL:AL513329 EMBL:AL590723 HGNC:HGNC:17440 ChiTaRS:RFWD2
Ensembl:ENST00000367667 Uniprot:H0Y340
Length = 113
Score = 90 (36.7 bits), Expect = 0.00031, P = 0.00031
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 144 EGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGTCPICNRSIIEILD 196
+ +D++C +C + + A CGH+FC C + CP CN +++ +D
Sbjct: 35 KSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNY-VVDNID 86
>ZFIN|ZDB-GENE-030131-2628 [details] [associations]
symbol:mex3b "mex-3 homolog B (C. elegans)"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 PROSITE:PS50089
SMART:SM00184 SMART:SM00322 ZFIN:ZDB-GENE-030131-2628 GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
HOVERGEN:HBG071698 KO:K15686 CTD:84206 eggNOG:NOG260228
HOGENOM:HOG000236282 OMA:SPDGCPE OrthoDB:EOG4XPQG9
GeneTree:ENSGT00390000018714 EMBL:CU929131 EMBL:BC131871
IPI:IPI00610368 RefSeq:NP_001074462.1 UniGene:Dr.105567 SMR:A2RRV6
Ensembl:ENSDART00000101537 GeneID:569582 KEGG:dre:569582
NextBio:20889751 Uniprot:A2RRV6
Length = 537
Score = 110 (43.8 bits), Expect = 0.00038, P = 0.00038
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 141 TLREGSDWMCCVCMERNKGAAFIPCGHT-FCRVCSRDLW-LNRGTCPICNRSIIEILDIF 198
T R+GS C VC E AA +PCGH FC C+ + N CP+C+ ++ + + IF
Sbjct: 478 TSRKGSR-DCSVCFESEVIAALVPCGHNLFCMECANRICERNEPKCPVCHAAVTQAIRIF 536
>UNIPROTKB|D6RAS2 [details] [associations]
symbol:TRIM60 "Tripartite motif-containing protein 60"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 HOGENOM:HOG000234133 HGNC:HGNC:21162
EMBL:AC106872 IPI:IPI00967237 ProteinModelPortal:D6RAS2 SMR:D6RAS2
Ensembl:ENST00000507119 ArrayExpress:D6RAS2 Bgee:D6RAS2
Uniprot:D6RAS2
Length = 90
Score = 89 (36.4 bits), Expect = 0.00040, P = 0.00040
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 139 VLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGT---CPIC 187
++ L+E S C +C+E K I CGH FCR C W + CP+C
Sbjct: 7 LVNLQEESS--CPICLEYLKDPVTINCGHNFCRSCLSVSWKDLDDTFPCPVC 56
>UNIPROTKB|E9PMW5 [details] [associations]
symbol:TRIM3 "Tripartite motif-containing protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC084337 InterPro:IPR017907 IPI:IPI00985414
HGNC:HGNC:10064 ProteinModelPortal:E9PMW5 SMR:E9PMW5
Ensembl:ENST00000529529 ArrayExpress:E9PMW5 Bgee:E9PMW5
Uniprot:E9PMW5
Length = 96
Score = 89 (36.4 bits), Expect = 0.00040, P = 0.00040
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 128 MKKDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRG---TC 184
M K D G EV + + +C +C++R + +PC HTFC C ++ + +C
Sbjct: 1 MAKREDSPGPEVQPM-DKQFLVCSICLDRYQCPKVLPCLHTFCERCLQNYIPAQSLTLSC 59
Query: 185 PICNRSII 192
P+C ++ I
Sbjct: 60 PVCRQTSI 67
>RGD|1561238 [details] [associations]
symbol:RGD1561238 "similar to ring finger protein 122 homolog"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1561238 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
IPI:IPI00394572 Ensembl:ENSRNOT00000031701 Uniprot:F1LZF5
Length = 95
Score = 89 (36.4 bits), Expect = 0.00040, P = 0.00040
Identities = 20/46 (43%), Positives = 24/46 (52%)
Query: 150 CCVCMERNKGA---AFIPCGHTFCRVCSRDLWLN-RGTCPICNRSI 191
C VC+E KG +PC H F R C WL R CP+CN+ I
Sbjct: 33 CAVCLEDFKGKDELGVLPCQHAFHRKCLVK-WLEVRCVCPMCNKPI 77
>MGI|MGI:3039616 [details] [associations]
symbol:Znrf3 "zinc and ring finger 3" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005109 "frizzled binding" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISO] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IMP] [GO:0038018 "Wnt receptor catabolic process"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IMP] [GO:0060071 "Wnt receptor signaling pathway, planar
cell polarity pathway" evidence=IMP] [GO:0072089 "stem cell
proliferation" evidence=IMP] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISO] [GO:2000051
"negative regulation of non-canonical Wnt receptor signaling
pathway" evidence=ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:3039616
Prosite:PS00518 GO:GO:0005887 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0090090
HSSP:Q9LRB7 eggNOG:COG5540 GO:GO:0004842 GO:GO:0060070
EMBL:AL662876 GO:GO:0072089 GO:GO:0060071 EMBL:AL662853
GeneTree:ENSGT00530000063291 GO:GO:0038018 CTD:84133
HOGENOM:HOG000155811 HOVERGEN:HBG082538 KO:K16273 OMA:GNPSAVC
OrthoDB:EOG48D0TP GO:GO:2000051 EMBL:AK133342 EMBL:BC151080
EMBL:BC151083 IPI:IPI00606016 IPI:IPI00828435 RefSeq:NP_001074393.1
UniGene:Mm.216313 ProteinModelPortal:Q5SSZ7 SMR:Q5SSZ7
PhosphoSite:Q5SSZ7 PRIDE:Q5SSZ7 Ensembl:ENSMUST00000109867
Ensembl:ENSMUST00000172492 GeneID:407821 KEGG:mmu:407821
UCSC:uc007hwj.2 UCSC:uc007hwk.2 InParanoid:Q5SSZ7 NextBio:407279
Bgee:Q5SSZ7 CleanEx:MM_ZNRF3 Genevestigator:Q5SSZ7 Uniprot:Q5SSZ7
Length = 913
Score = 112 (44.5 bits), Expect = 0.00041, P = 0.00041
Identities = 30/82 (36%), Positives = 40/82 (48%)
Query: 118 IEETDGGDWQMKKDGDVEG--GEVLTLREGSDWMCCVCMER---NKGAAFIPCGHTFCRV 172
+E+ + + K G EG G + TL GS C +C+E+ + IPC H F R
Sbjct: 256 LEKMETRKFNSKSKGRREGSCGALDTLSSGSTSDCAICLEKYIDGEELRVIPCTHRFHRK 315
Query: 173 CSRDLWL-NRGTCPICNRSIIE 193
C D WL TCP C +IIE
Sbjct: 316 CV-DPWLLQHHTCPHCRHNIIE 336
>TAIR|locus:2162504 [details] [associations]
symbol:RAD5 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IMP;IDA] [GO:0045003 "double-strand break
repair via synthesis-dependent strand annealing" evidence=IDA]
[GO:0006261 "DNA-dependent DNA replication" evidence=RCA]
[GO:0009294 "DNA mediated transformation" evidence=IMP]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014905 Pfam:PF00176 Pfam:PF00271 Pfam:PF08797
PROSITE:PS00690 PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184
SMART:SM00490 SMART:SM00910 Prosite:PS00518 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004386 EMBL:AB006699 InterPro:IPR017907
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0009294 GO:GO:0045003 KO:K15505 EMBL:AK228695 IPI:IPI00523984
RefSeq:NP_197667.1 UniGene:At.31042 ProteinModelPortal:Q9FNI6
SMR:Q9FNI6 STRING:Q9FNI6 PaxDb:Q9FNI6 PRIDE:Q9FNI6
EnsemblPlants:AT5G22750.1 GeneID:832338 KEGG:ath:AT5G22750
GeneFarm:4640 TAIR:At5g22750 HOGENOM:HOG000029930 InParanoid:Q9FNI6
OMA:KPIMLRR PhylomeDB:Q9FNI6 ProtClustDB:CLSN2686824
Genevestigator:Q9FNI6 GermOnline:AT5G22750 Uniprot:Q9FNI6
Length = 1029
Score = 112 (44.5 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 142 LREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNR--GTCPICNRSI 191
LR+G C +C+E + A PC H CR C W N G CP+C ++
Sbjct: 786 LRKGEQGECPICLEALEDAVLTPCAHRLCRECLLASWRNSTSGLCPVCRNTV 837
Score = 36 (17.7 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 91 RNLRSGDGLVVPKKNAAGTAVKT 113
R L+SGD LV ++ G +T
Sbjct: 127 RKLKSGDELVFTFPHSKGLKPET 149
>UNIPROTKB|E1BST1 [details] [associations]
symbol:PEX10 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005779 "integral to peroxisomal membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR001841 InterPro:IPR025654 PROSITE:PS50089 SMART:SM00184
InterPro:IPR006845 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005779 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016558
InterPro:IPR017907 KO:K13346 OMA:FRQRQRA PANTHER:PTHR23350
Pfam:PF04757 CTD:5192 GeneTree:ENSGT00510000048446
EMBL:AADN02040876 IPI:IPI00596417 RefSeq:NP_001185583.1
UniGene:Gga.7879 ProteinModelPortal:E1BST1
Ensembl:ENSGALT00000001855 GeneID:419396 KEGG:gga:419396
NextBio:20822455 Uniprot:E1BST1
Length = 327
Score = 107 (42.7 bits), Expect = 0.00044, P = 0.00044
Identities = 19/64 (29%), Positives = 32/64 (50%)
Query: 125 DWQMKKDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGT- 183
+W++ ++ ++ + G C +C+E + A PCGH FC C + W N T
Sbjct: 248 EWKLHRNLALQKNTIKEGTTGRQSRCTLCLEERRHATATPCGHLFCWECITE-WCNTRTE 306
Query: 184 CPIC 187
CP+C
Sbjct: 307 CPLC 310
>TAIR|locus:4515102961 [details] [associations]
symbol:APD4 "ABERRANT POLLEN DEVELOPMENT 4"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007067 "mitosis" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685 GO:GO:0007067
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
UniGene:At.53065 IPI:IPI00891934 RefSeq:NP_001118468.1
UniGene:At.73935 ProteinModelPortal:F4ISV9 SMR:F4ISV9
EnsemblPlants:AT2G38195.1 GeneID:6240532 KEGG:ath:AT2G38195
Uniprot:F4ISV9
Length = 399
Score = 108 (43.1 bits), Expect = 0.00046, P = 0.00046
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 149 MCCVCMERNKGAAFIPCGHTF-CRVCSRDLWLNRGTCPICNRSIIEILDIF 198
+C +C + + F+PCGH C C + +G CPIC + I+ + I+
Sbjct: 347 LCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKIMHVKRIY 397
>TAIR|locus:2042922 [details] [associations]
symbol:APD3 "ABERRANT POLLEN DEVELOPMENT 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IMP] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0007067 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC003028
eggNOG:NOG121302 IPI:IPI00528340 RefSeq:NP_181357.2
UniGene:At.53065 ProteinModelPortal:B3H754 SMR:B3H754
EnsemblPlants:AT2G38220.1 GeneID:818401 KEGG:ath:AT2G38220
TAIR:At2g38220 HOGENOM:HOG000005728 PhylomeDB:B3H754
ProtClustDB:CLSN2708479 Genevestigator:B3H754 Uniprot:B3H754
Length = 404
Score = 108 (43.1 bits), Expect = 0.00047, P = 0.00047
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 149 MCCVCMERNKGAAFIPCGHTF-CRVCSRDLWLNRGTCPICNRSIIEILDIF 198
+C +C + + F+PCGH C C + +G CPIC + +I + I+
Sbjct: 352 LCAICFDAPRDCCFLPCGHCVSCYQCGTKIKRTKGRCPICRKKMIHVKRIY 402
>TAIR|locus:2200301 [details] [associations]
symbol:AT1G68070 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684 GO:GO:0005774
GO:GO:0046872 GO:GO:0008270 EMBL:AC012563 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 ProtClustDB:CLSN2682050
EMBL:BT024880 IPI:IPI00540766 PIR:H96703 RefSeq:NP_176974.1
UniGene:At.35572 ProteinModelPortal:Q9C9X1 SMR:Q9C9X1 PRIDE:Q9C9X1
EnsemblPlants:AT1G68070.1 GeneID:843135 KEGG:ath:AT1G68070
TAIR:At1g68070 InParanoid:Q9C9X1 OMA:MLWNTAF PhylomeDB:Q9C9X1
Genevestigator:Q9C9X1 Uniprot:Q9C9X1
Length = 343
Score = 107 (42.7 bits), Expect = 0.00048, P = 0.00048
Identities = 34/117 (29%), Positives = 53/117 (45%)
Query: 83 LAMALAAERNLRSGDGLVVPKKNAAGTAVKTLMMLIEETDGGDWQMKKDGDVE--GGEVL 140
L A+A + D ++PK T+ +++DGG + D E G E +
Sbjct: 230 LLYAVAGQEGASEADLSILPKYR-----FHTMNNDEKQSDGGGKMIPVDAASENLGNERV 284
Query: 141 TLREGSDWMCCVCMERNK-GAAFI--PCGHTFCRVCSRDLWLN-RGTCPICNRSIIE 193
L E +D CC+C+ + GA + PC H F C WL TCP+C +I++
Sbjct: 285 LLPEDAD--CCICLSSYEDGAELVSLPCNHHFHSTCIVK-WLKMNATCPLCKFNILK 338
>TAIR|locus:2044752 [details] [associations]
symbol:EDA18 "embryo sac development arrest 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009553 "embryo sac development" evidence=IMP] [GO:0009555
"pollen development" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685 GO:GO:0009555
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0009553 IPI:IPI00527292 RefSeq:NP_181038.2 UniGene:At.19597
UniGene:At.66369 ProteinModelPortal:F4IIX4 SMR:F4IIX4 PRIDE:F4IIX4
EnsemblPlants:AT2G34920.1 GeneID:818057 KEGG:ath:AT2G34920
OMA:LRCANEL Uniprot:F4IIX4
Length = 652
Score = 110 (43.8 bits), Expect = 0.00049, P = 0.00049
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 150 CCVCMERNKGAAFIPCGHTF-CRVCSRDLWLNRGTCPICNRSIIEILDIF 198
CCVC E CGH C C+ +L N G CPIC+ I++++ +F
Sbjct: 598 CCVCNETQVETLLYRCGHMCTCLRCANELQYNGGKCPICHAKILDVVRVF 647
>ZFIN|ZDB-GENE-050522-17 [details] [associations]
symbol:trim35-1 "tripartite motif containing 35-1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
ZFIN:ZDB-GENE-050522-17 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 eggNOG:NOG291077 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
HOGENOM:HOG000124586 OrthoDB:EOG4QNMW8 GeneTree:ENSGT00680000099496
EMBL:BX469930 EMBL:BC095360 IPI:IPI00485397 RefSeq:NP_001018156.1
UniGene:Dr.108683 Ensembl:ENSDART00000073777 GeneID:553197
KEGG:dre:553197 CTD:553197 InParanoid:Q503E5 OMA:EACEINI
NextBio:20879991 Uniprot:Q503E5
Length = 507
Score = 109 (43.4 bits), Expect = 0.00049, P = 0.00049
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 147 DWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGT--CPICNR 189
D C VC + + + CGH+FCR C D W + GT CPIC +
Sbjct: 6 DLSCAVCTDVFRDPVLLGCGHSFCRQCIYDHWSSSGTRNCPICRQ 50
>UNIPROTKB|Q32L15 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 EMBL:BC109813 IPI:IPI00760467
RefSeq:NP_001035656.1 UniGene:Bt.107371 ProteinModelPortal:Q32L15
SMR:Q32L15 PRIDE:Q32L15 Ensembl:ENSBTAT00000021020 GeneID:539455
KEGG:bta:539455 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 InParanoid:Q32L15 OMA:MWMGRVK OrthoDB:EOG4GHZQ3
NextBio:20877998 Uniprot:Q32L15
Length = 230
Score = 104 (41.7 bits), Expect = 0.00054, P = 0.00054
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 137 GEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRG-TCPIC 187
G V L + + CC+CM+ + +PC H+FC+ C D W +R CPIC
Sbjct: 144 GRVKQLTDEEE--CCICMD-GRADLILPCAHSFCQKCI-DKWSDRHRNCPIC 191
>UNIPROTKB|F1Q4F0 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0006355 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
GeneTree:ENSGT00390000003145 OMA:MWMGRVK EMBL:AAEX03012903
ProteinModelPortal:F1Q4F0 Ensembl:ENSCAFT00000039375 Uniprot:F1Q4F0
Length = 230
Score = 104 (41.7 bits), Expect = 0.00054, P = 0.00054
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 137 GEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRG-TCPIC 187
G V L + + CC+CM+ + +PC H+FC+ C D W +R CPIC
Sbjct: 144 GRVKQLTDEEE--CCICMD-GRADLILPCAHSFCQKCI-DKWSDRHRNCPIC 191
>UNIPROTKB|Q8WVD5 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
EMBL:CH471064 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 CTD:50862 eggNOG:NOG273394 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OMA:MWMGRVK OrthoDB:EOG4GHZQ3 EMBL:AF214680
EMBL:AK289764 EMBL:BC018104 EMBL:BT006662 IPI:IPI00152564
RefSeq:NP_057506.2 UniGene:Hs.44685 UniGene:Hs.712894 PDB:2ECN
PDBsum:2ECN ProteinModelPortal:Q8WVD5 SMR:Q8WVD5 IntAct:Q8WVD5
STRING:Q8WVD5 PhosphoSite:Q8WVD5 DMDM:74751546 PRIDE:Q8WVD5
DNASU:50862 Ensembl:ENST00000265981 GeneID:50862 KEGG:hsa:50862
UCSC:uc001mis.1 GeneCards:GC11M010533 HGNC:HGNC:21159 HPA:HPA018133
neXtProt:NX_Q8WVD5 PharmGKB:PA134981805 InParanoid:Q8WVD5
PhylomeDB:Q8WVD5 ChiTaRS:RNF141 EvolutionaryTrace:Q8WVD5
GenomeRNAi:50862 NextBio:53366 ArrayExpress:Q8WVD5 Bgee:Q8WVD5
CleanEx:HS_RNF141 CleanEx:HS_ZNF230 Genevestigator:Q8WVD5
GermOnline:ENSG00000110315 Uniprot:Q8WVD5
Length = 230
Score = 104 (41.7 bits), Expect = 0.00054, P = 0.00054
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 137 GEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRG-TCPIC 187
G V L + + CC+CM+ + +PC H+FC+ C D W +R CPIC
Sbjct: 144 GRVKQLTDEEE--CCICMD-GRADLILPCAHSFCQKCI-DKWSDRHRNCPIC 191
>MGI|MGI:1914400 [details] [associations]
symbol:Rnf141 "ring finger protein 141" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 MGI:MGI:1914400 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
GeneTree:ENSGT00390000003145 HOGENOM:HOG000247058
HOVERGEN:HBG055763 OMA:MWMGRVK EMBL:AF353167 EMBL:AK006791
EMBL:AK011839 EMBL:AK015505 EMBL:BC018553 IPI:IPI00874421
RefSeq:NP_080275.2 UniGene:Mm.96867 ProteinModelPortal:Q99MB7
SMR:Q99MB7 STRING:Q99MB7 PhosphoSite:Q99MB7 PaxDb:Q99MB7
PRIDE:Q99MB7 Ensembl:ENSMUST00000106682 Ensembl:ENSMUST00000177236
GeneID:67150 KEGG:mmu:67150 UCSC:uc009jfp.1 NextBio:323730
Bgee:Q99MB7 CleanEx:MM_RNF141 Genevestigator:Q99MB7
GermOnline:ENSMUSG00000030788 Uniprot:Q99MB7
Length = 230
Score = 104 (41.7 bits), Expect = 0.00054, P = 0.00054
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 137 GEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRG-TCPIC 187
G V L + + CC+CM+ + +PC H+FC+ C D W +R CPIC
Sbjct: 144 GRVKQLTDEEE--CCICMD-GRADLILPCAHSFCQKCI-DKWSDRHRNCPIC 191
>UNIPROTKB|Q2XNS1 [details] [associations]
symbol:RNF141 "RING finger protein 141" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 CTD:50862 eggNOG:NOG273394
HOGENOM:HOG000247058 HOVERGEN:HBG055763 OrthoDB:EOG4GHZQ3
EMBL:DQ273566 RefSeq:NP_001041484.1 UniGene:Cfa.10740
ProteinModelPortal:Q2XNS1 SMR:Q2XNS1 GeneID:476852 KEGG:cfa:476852
InParanoid:Q2XNS1 NextBio:20852447 Uniprot:Q2XNS1
Length = 231
Score = 104 (41.7 bits), Expect = 0.00055, P = 0.00055
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 137 GEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRG-TCPIC 187
G V L + + CC+CM+ + +PC H+FC+ C D W +R CPIC
Sbjct: 145 GRVKQLTDEEE--CCICMD-GRADLILPCAHSFCQKCI-DKWSDRHRNCPIC 192
>UNIPROTKB|H7C5V9 [details] [associations]
symbol:LONRF1 "LON peptidase N-terminal domain and RING
finger protein 1" species:9606 "Homo sapiens" [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003111 Pfam:PF02190
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR015947 SUPFAM:SSF88697 InterPro:IPR017907 GO:GO:0004176
EMBL:AC123777 HGNC:HGNC:26302 Ensembl:ENST00000524526 Bgee:H7C5V9
Uniprot:H7C5V9
Length = 376
Score = 107 (42.7 bits), Expect = 0.00056, P = 0.00056
Identities = 28/92 (30%), Positives = 43/92 (46%)
Query: 108 GTAVKTLMMLIEE----TDGGDWQMKKDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFI 163
G +K + L+E+ + G ++KK G G L + SD+ C +CM
Sbjct: 37 GVLLKRKLSLLEQDVIVNEDGRNKLKKQG-AYGDIPEELIDVSDFECSLCMRLFFEPVTT 95
Query: 164 PCGHTFCRVCSRDLWLNRGTCPICNRSIIEIL 195
PCGH+FC+ C + CP+C S+ E L
Sbjct: 96 PCGHSFCKNCLERCLDHAPYCPLCKESLKEYL 127
>ZFIN|ZDB-GENE-091113-36 [details] [associations]
symbol:trim35-10 "tripartite motif containing 35-10"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR003877 Pfam:PF00622 Pfam:PF00643
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00336
Prosite:PS00518 ZFIN:ZDB-GENE-091113-36 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 InterPro:IPR001870
PROSITE:PS50188 InterPro:IPR003879 InterPro:IPR006574
PRINTS:PR01407 SMART:SM00589 GeneTree:ENSGT00680000099496
EMBL:CU855801 IPI:IPI00627161 ProteinModelPortal:F1Q6F7
Ensembl:ENSDART00000142691 Uniprot:F1Q6F7
Length = 461
Score = 108 (43.1 bits), Expect = 0.00057, P = 0.00057
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 137 GEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGT--CPICNR 189
G++ +L + D+ C VC E K F+ C H+FC+ C + W T CP+C R
Sbjct: 6 GKMASLSD--DFSCPVCCEIFKDPVFLSCSHSFCKKCLQQYWSTTETEECPVCRR 58
>ZFIN|ZDB-GENE-060825-103 [details] [associations]
symbol:zgc:153151 "zgc:153151" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 Pfam:PF00097 Prosite:PS00518 ZFIN:ZDB-GENE-060825-103
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 EMBL:CR318603 IPI:IPI00920283
Ensembl:ENSDART00000131053 GeneTree:ENSGT00700000105241 Bgee:E7F6W7
Uniprot:E7F6W7
Length = 471
Score = 108 (43.1 bits), Expect = 0.00059, P = 0.00059
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 150 CCVCMERNKGAAFIPCGHTFCRVCSRDLW-LNRGT-CPICNRSIIE 193
C +C+E + + PCGH+FC+ C ++ W ++ + CP C S E
Sbjct: 235 CFICLESSIDVVWTPCGHSFCKACLKECWEISHDSRCPCCKESFTE 280
>CGD|CAL0005267 [details] [associations]
symbol:orf19.2105 species:5476 "Candida albicans" [GO:0005684
"U2-type spliceosomal complex" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0034247 "snoRNA splicing" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000571 Pfam:PF00642 PROSITE:PS50089
PROSITE:PS50103 SMART:SM00184 SMART:SM00356 CGD:CAL0005267
Prosite:PS00518 GO:GO:0008380 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006397 GO:GO:0005681 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5152 KO:K13127 EMBL:AACQ01000031
EMBL:AACQ01000030 RefSeq:XP_719551.1 RefSeq:XP_719676.1
ProteinModelPortal:Q5ACW2 STRING:Q5ACW2 GeneID:3638713
GeneID:3638802 KEGG:cal:CaO19.2105 KEGG:cal:CaO19.9653
Uniprot:Q5ACW2
Length = 216
Score = 103 (41.3 bits), Expect = 0.00061, P = 0.00061
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 128 MKKDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWL--NRGTCP 185
+KKD ++ G + + +E + C +C K CGH FC+ C D + +GTC
Sbjct: 134 IKKDWEIGGQKEVKEKEDIPFKCVLCKSDYKSPIKTECGHIFCKACFLDRYKAKKKGTCF 193
Query: 186 ICNR 189
IC++
Sbjct: 194 ICHK 197
>ZFIN|ZDB-GENE-040625-71 [details] [associations]
symbol:rnf141 "ring finger protein 141" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-040625-71 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907 CTD:50862
eggNOG:NOG273394 HOGENOM:HOG000247058 HOVERGEN:HBG055763
OrthoDB:EOG4GHZQ3 EMBL:AY621088 EMBL:BC071534 IPI:IPI00613818
RefSeq:NP_001007291.1 UniGene:Dr.77741 ProteinModelPortal:Q6IV56
SMR:Q6IV56 GeneID:414846 KEGG:dre:414846 InParanoid:Q6IV56
NextBio:20818742 Uniprot:Q6IV56
Length = 222
Score = 103 (41.3 bits), Expect = 0.00066, P = 0.00066
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 137 GEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRG-TCPIC 187
G V L + + CC+CM+ K +PC H+FC+ C D W + CP+C
Sbjct: 136 GRVKQLTDEEE--CCICMD-GKADLILPCAHSFCQKCI-DKWSGQSRNCPVC 183
>UNIPROTKB|F1MGD1 [details] [associations]
symbol:RNF135 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045088 "regulation of innate immune response"
evidence=IEA] [GO:0043021 "ribonucleoprotein complex binding"
evidence=IEA] [GO:0032728 "positive regulation of interferon-beta
production" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR003877 Pfam:PF00622 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0043021 InterPro:IPR017907
GO:GO:0045088 InterPro:IPR001870 PROSITE:PS50188 InterPro:IPR003879
InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589 GO:GO:0032728
OMA:WLYGLHP GeneTree:ENSGT00650000093365 EMBL:DAAA02048521
IPI:IPI00854513 UniGene:Bt.2288 ProteinModelPortal:F1MGD1
PRIDE:F1MGD1 Ensembl:ENSBTAT00000022890 Uniprot:F1MGD1
Length = 424
Score = 107 (42.7 bits), Expect = 0.00068, P = 0.00068
Identities = 20/43 (46%), Positives = 24/43 (55%)
Query: 147 DWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGT--CPIC 187
D C +C + A +PCGHTFCR C DLW R + CP C
Sbjct: 18 DLGCIICHDLLAWPATLPCGHTFCRDCLLDLWAARRSRFCPSC 60
>TAIR|locus:1006230720 [details] [associations]
symbol:AT1G24580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 KO:K16285
ProtClustDB:CLSN2681281 EMBL:BT014952 EMBL:BT020604 IPI:IPI00542297
RefSeq:NP_973908.1 UniGene:At.49461 ProteinModelPortal:Q6GKW2
SMR:Q6GKW2 EnsemblPlants:AT1G24580.1 GeneID:2745762
KEGG:ath:AT1G24580 eggNOG:NOG279711 OMA:FQIVASE
Genevestigator:Q6GKW2 Uniprot:Q6GKW2
Length = 113
Score = 87 (35.7 bits), Expect = 0.00069, P = 0.00069
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 150 CCVCM----ERNKGAAFIPCGHTFCRVCSRDLWL--NRGTCPICNRSII 192
CCVC+ E + + + C H F R C D W N TCP+C RSI+
Sbjct: 67 CCVCLCGFKEEEEVSELVSCKHFFHRACL-DNWFGNNHTTCPLC-RSIL 113
>UNIPROTKB|E5RGB3 [details] [associations]
symbol:TRIM35 "Tripartite motif-containing protein 35"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000315 Pfam:PF00643 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00336 Prosite:PS00518
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
HGNC:HGNC:16285 EMBL:AC124649 IPI:IPI00974297
ProteinModelPortal:E5RGB3 SMR:E5RGB3 Ensembl:ENST00000521253
UCSC:uc010lup.1 ArrayExpress:E5RGB3 Bgee:E5RGB3 Uniprot:E5RGB3
Length = 266
Score = 104 (41.7 bits), Expect = 0.00076, P = 0.00076
Identities = 21/62 (33%), Positives = 32/62 (51%)
Query: 128 MKKDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNR--GTCP 185
M++ DV G + +E + +C VC + + A + CGH FCR C W + TCP
Sbjct: 1 MERSPDVSPGPSRSFKE--ELLCAVCYDPFRDAVTLRCGHNFCRGCVSRCWEVQVSPTCP 58
Query: 186 IC 187
+C
Sbjct: 59 VC 60
>WB|WBGene00017342 [details] [associations]
symbol:F10D7.5 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 GO:GO:0009792 GO:GO:0046872
GO:GO:0008270 GO:GO:0000003 Gene3D:3.30.40.10 InterPro:IPR013083
KO:K01931 InterPro:IPR006573 Pfam:PF07177 SMART:SM00588
PROSITE:PS51065 GeneTree:ENSGT00530000063117 OMA:AIPCGPR
EMBL:FO080923 UniGene:Cel.7840 GeneID:181767 KEGG:cel:CELE_F10D7.5
UCSC:F10D7.5a CTD:181767 NextBio:915254 HOGENOM:HOG000144540
RefSeq:NP_510818.3 ProteinModelPortal:Q7JP67 SMR:Q7JP67
PRIDE:Q7JP67 EnsemblMetazoa:F10D7.5a WormBase:F10D7.5a
InParanoid:Q7JP67 ArrayExpress:Q7JP67 Uniprot:Q7JP67
Length = 617
Score = 108 (43.1 bits), Expect = 0.00086, P = 0.00086
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 135 EGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHT-FCRVCSRDLWLNRGTCPICNRSIIE 193
EG + EG + C +CM+ + CGH C C R L +GTCPIC + +
Sbjct: 553 EGNGAQEVNEGDE--CTICMDAPVNSVLYTCGHMCMCFECGRRLLTTKGTCPICRAPVQD 610
Query: 194 ILDIF 198
++ +
Sbjct: 611 VIKTY 615
>TAIR|locus:2202882 [details] [associations]
symbol:ZCF61 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] InterPro:IPR001841 InterPro:IPR022170 Pfam:PF12483
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0016881
eggNOG:NOG121302 EMBL:AC027036 KO:K15688 EMBL:BT006461
EMBL:AK228076 IPI:IPI00532395 RefSeq:NP_564745.1 UniGene:At.452
ProteinModelPortal:Q94HV7 SMR:Q94HV7 EnsemblPlants:AT1G59560.1
GeneID:842247 KEGG:ath:AT1G59560 TAIR:At1g59560 InParanoid:Q94HV7
OMA:MIHLAGF PhylomeDB:Q94HV7 ProtClustDB:CLSN2688913
Genevestigator:Q94HV7 Uniprot:Q94HV7
Length = 338
Score = 105 (42.0 bits), Expect = 0.00087, P = 0.00087
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 134 VEGGEVLTLREG-SDWMCCVCMERNKGAAFIPCGHTFCRV-CSRDLWLNRGTCPICNRSI 191
V GG T R+G + +C VC+++ AF+ CGH C CS L R TCP+C I
Sbjct: 276 VTGGG--TSRDGDTPDLCVVCLDQKYNTAFVECGHMCCCTPCSLQL---R-TCPLCRERI 329
Query: 192 IEILDIF 198
++L I+
Sbjct: 330 QQVLKIY 336
>UNIPROTKB|D6RAH9 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00966985
ProteinModelPortal:D6RAH9 SMR:D6RAH9 Ensembl:ENST00000510143
HOGENOM:HOG000207449 ArrayExpress:D6RAH9 Bgee:D6RAH9 Uniprot:D6RAH9
Length = 99
Score = 86 (35.3 bits), Expect = 0.00090, P = 0.00090
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 147 DWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGTCPICNRSII 192
D +C +C++ PCGHT+C +C + + + CP+ + ++
Sbjct: 38 DLICHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCPMDRKPLV 83
>UNIPROTKB|D6RB76 [details] [associations]
symbol:LNX1 "E3 ubiquitin-protein ligase LNX" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0042787 "protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0051260
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR017907 GO:GO:0042787 EMBL:AC058822 EMBL:AC095040
HGNC:HGNC:6657 EMBL:AC124017 IPI:IPI00967553
ProteinModelPortal:D6RB76 SMR:D6RB76 Ensembl:ENST00000512247
ArrayExpress:D6RB76 Bgee:D6RB76 Uniprot:D6RB76
Length = 90
Score = 86 (35.3 bits), Expect = 0.00090, P = 0.00090
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 147 DWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRGTCPICNRSII 192
D +C +C++ PCGHT+C +C + + + CP+ + ++
Sbjct: 38 DLICHICLQALLDPLDTPCGHTYCTLCLTNFLVEKDFCPMDRKPLV 83
>TAIR|locus:2059359 [details] [associations]
symbol:COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA;IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009640 "photomorphogenesis" evidence=IGI;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000152 "nuclear ubiquitin
ligase complex" evidence=TAS] [GO:0009647 "skotomorphogenesis"
evidence=TAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010119 "regulation of stomatal movement"
evidence=IGI;IMP] [GO:0046283 "anthocyanin-containing compound
metabolic process" evidence=IMP] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0048573 "photoperiodism,
flowering" evidence=IMP] [GO:0006281 "DNA repair" evidence=RCA;IMP]
[GO:0009649 "entrainment of circadian clock" evidence=IMP]
[GO:0010100 "negative regulation of photomorphogenesis"
evidence=RCA] [GO:0048608 "reproductive structure development"
evidence=RCA] [GO:0009641 "shade avoidance" evidence=IMP]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0010119 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0009649 GO:GO:0008270 GO:GO:0006281 eggNOG:COG2319
GO:GO:0009640 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009585
GO:GO:0048573 EMBL:AC003033 GO:GO:0004842 InterPro:IPR017907
GO:GO:0009641 GO:GO:0000152 GO:GO:0009647 GO:GO:0046283 EMBL:L24437
EMBL:BT025337 EMBL:AJ000535 EMBL:AJ000536 IPI:IPI00521947
PIR:T01112 RefSeq:NP_180854.1 UniGene:At.298
ProteinModelPortal:P43254 SMR:P43254 DIP:DIP-32850N IntAct:P43254
MINT:MINT-189205 STRING:P43254 PaxDb:P43254 PRIDE:P43254
EnsemblPlants:AT2G32950.1 GeneID:817857 KEGG:ath:AT2G32950
GeneFarm:2849 TAIR:At2g32950 HOGENOM:HOG000006123 InParanoid:P43254
KO:K10143 OMA:PICFEMI PhylomeDB:P43254 ProtClustDB:CLSN2683411
Genevestigator:P43254 GermOnline:AT2G32950 GO:GO:0080008
Uniprot:P43254
Length = 675
Score = 108 (43.1 bits), Expect = 0.00097, P = 0.00096
Identities = 21/70 (30%), Positives = 33/70 (47%)
Query: 122 DGGDWQMKKDGDVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNR 181
+G + DG G E+ D +C +CM+ K A CGH+FC +C N+
Sbjct: 24 EGANRHENDDGGSGGSEIGAPDLDKDLLCPICMQIIKDAFLTACGHSFCYMCIITHLRNK 83
Query: 182 GTCPICNRSI 191
CP C++ +
Sbjct: 84 SDCPCCSQHL 93
>UNIPROTKB|K7GT21 [details] [associations]
symbol:XIAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR001841 InterPro:IPR001370
Pfam:PF00653 PROSITE:PS50089 PROSITE:PS50143 SMART:SM00184
SMART:SM00238 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.1170.10 GeneTree:ENSGT00500000044782 EMBL:FP339604
Ensembl:ENSSSCT00000032720 Uniprot:K7GT21
Length = 230
Score = 102 (41.0 bits), Expect = 0.00097, P = 0.00097
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 133 DVEGGEVLTLREGSDWMCCVCMERNKGAAFIPCGHTF-CRVCSRDLWLNRGTCPICNRSI 191
++ E L L + + +C +CM+RN FIPCGH C+ C+ + CP+CN I
Sbjct: 167 EISAEEQLRLLQ-EEKLCKICMDRNIAVVFIPCGHLVTCKQCAEAI----DKCPMCNTVI 221
>UNIPROTKB|I3LDC9 [details] [associations]
symbol:RNF141 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 GeneTree:ENSGT00390000003145
OMA:MWMGRVK EMBL:FP312948 Ensembl:ENSSSCT00000022900 Uniprot:I3LDC9
Length = 231
Score = 102 (41.0 bits), Expect = 0.00098, P = 0.00098
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 137 GEVLTLREGSDWMCCVCMERNKGAAFIPCGHTFCRVCSRDLWLNRG-TCPIC 187
G V L + + CC+CM+ + +PC H+FC+ C D W +R CPIC
Sbjct: 145 GRVKQLTDEEE--CCICMD-GRADLILPCTHSFCQKCI-DKWSDRHRNCPIC 192
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.138 0.456 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 198 170 0.00086 108 3 11 22 0.46 31
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 604 (64 KB)
Total size of DFA: 174 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.30u 0.10s 14.40t Elapsed: 00:00:01
Total cpu time: 14.31u 0.10s 14.41t Elapsed: 00:00:01
Start: Mon May 20 16:51:14 2013 End: Mon May 20 16:51:15 2013