BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036556
(257 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P49252|AMO_LENCU Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3
Length = 667
Score = 221 bits (563), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/257 (43%), Positives = 159/257 (61%), Gaps = 6/257 (2%)
Query: 6 KTFLFALLLHISF-----LIPSHQYHPLDSLTPSEFTQIRSIVTKAYPKSTHNLTFQYVG 60
K LF++L +SF P H HPLD +T EF +++IV YP S + L F Y+G
Sbjct: 1 KFALFSVLTLLSFHAVFSFTPLHTQHPLDPITKEEFLAVQTIVQNKYPISNNKLAFHYIG 60
Query: 61 LEERTKQTVLSWLRNETTTNPPRQAFVVARIDHQTHEIIVDLSLQEITSKKTYNGYGYPL 120
+++ K VL + + T + PR+ FVVA I+ QTHEI++DL+++ I S +NGYG+P+
Sbjct: 61 VDDPEKDLVLKYETSPTLISIPRKIFVVAIINSQTHEILIDLTIKSIVSDNIHNGYGFPV 120
Query: 121 LTEEEQEDANKLASTYPLFVASISKRGLKLEEVECGSFTLGWFGEERKNKRIVKMMCYYL 180
L+ EQ A L YP F+AS++KRGL + E+ C SFT+GWFGEE KN R V++ C+
Sbjct: 121 LSAAEQFLAIDLPLKYPPFIASVNKRGLNISEIVCSSFTMGWFGEE-KNSRTVRVDCFMK 179
Query: 181 DGTLNADMRPIEGITMTVDPDEMKIIQFRDRITVLVPKGDGTEYRESKLKPPFRPSLKRT 240
+ T+N +RPI GIT+ D D MKI+++ DR T VP + TEY+ SK PPF P
Sbjct: 180 ESTVNIYVRPITGITIVADLDLMKIVEYHDRDTEAVPTAENTEYQVSKQSPPFGPKQHSL 239
Query: 241 TVVQPDRPSFNIVGSQI 257
T QP P F I G+ +
Sbjct: 240 TSHQPQGPGFQINGTSV 256
>sp|Q43077|AMO_PEA Primary amine oxidase OS=Pisum sativum PE=1 SV=1
Length = 674
Score = 220 bits (561), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 116/264 (43%), Positives = 162/264 (61%), Gaps = 8/264 (3%)
Query: 1 MAATS--KTFLFALLLHISF-----LIPSHQYHPLDSLTPSEFTQIRSIVTKAYPKSTHN 53
MA+T+ + LF++L +SF + P H HPLD LT EF +++IV YP S +
Sbjct: 1 MASTTTMRLALFSVLTLLSFHAVVSVTPLHVQHPLDPLTKEEFLAVQTIVQNKYPISNNR 60
Query: 54 LTFQYVGLEERTKQTVLSWLRNETTTNPPRQAFVVARIDHQTHEIIVDLSLQEITSKKTY 113
L F Y+GL++ K VL + + T + PR+ FVVA I+ QTHEI+++L ++ I S +
Sbjct: 61 LAFHYIGLDDPEKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLRIRSIVSDNIH 120
Query: 114 NGYGYPLLTEEEQEDANKLASTYPLFVASISKRGLKLEEVECGSFTLGWFGEERKNKRIV 173
NGYG+P+L+ +EQ A KL YP F+ S+ KRGL L E+ C SFT+GWFGEE KN R V
Sbjct: 121 NGYGFPILSVDEQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGEE-KNVRTV 179
Query: 174 KMMCYYLDGTLNADMRPIEGITMTVDPDEMKIIQFRDRITVLVPKGDGTEYRESKLKPPF 233
++ C+ + T+N +RPI GIT+ D D MKI+++ DR VP + TEY+ SK PPF
Sbjct: 180 RLDCFMKESTVNIYVRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPF 239
Query: 234 RPSLKRTTVVQPDRPSFNIVGSQI 257
P T QP P F I G +
Sbjct: 240 GPKQHSLTSHQPQGPGFQINGHSV 263
>sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2
SV=1
Length = 712
Score = 140 bits (353), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 127/230 (55%), Gaps = 4/230 (1%)
Query: 25 YHPLDSLTPSEFTQIRSIVTKAYPK-STHNLTFQYVGLEERTKQTVLSWLRNETTTNPPR 83
+HPLD LT E ++R+I++ P + + T + L+E K V+ W + + R
Sbjct: 59 HHPLDPLTVREINRVRTILSNHDPGFGSGSATIHSMALDEPEKSRVVQWKKGNKLLS--R 116
Query: 84 QAFVVARIDHQTHEIIVDLSLQEITSKKTYNGYGYPLLTEEEQEDANKLASTYPLFVASI 143
+A VVA QTHEI VDL + S GYP+LT + A+++ F SI
Sbjct: 117 RAAVVAYWGGQTHEITVDLDSGRVVSDVINRTSGYPILTLNDVFAASQVPLKSLEFNRSI 176
Query: 144 SKRGLKLEEVECGSFTLGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDPDEM 203
RG+K ++ C + GWFG E + +R++++ C+ L GT N MRP+EG+ +TVD D++
Sbjct: 177 EARGVKFSDLACITPFAGWFGSEEEGRRVIRVQCFTLQGTTNYFMRPLEGLYVTVDLDKL 236
Query: 204 KIIQFRDRITVLVPKGDGTEYRES-KLKPPFRPSLKRTTVVQPDRPSFNI 252
++I+ D+ + +PK GTEYR + KP + ++ QPD PSF +
Sbjct: 237 EVIKIIDKGPIPIPKASGTEYRFGVQNKPVHMDRINPISMEQPDGPSFRV 286
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1
SV=1
Length = 648
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 9/234 (3%)
Query: 26 HPLDSLTPSEFTQIRSIVTKAYPKSTHNLTFQYVGLEERTKQTVLSWLRNETTTNPPRQA 85
HPLD L+ E + +I+ K P + + F V L E +K LR A
Sbjct: 15 HPLDPLSRVEIARAVAIL-KEGPAAAESFRFISVELREPSKDD----LRAGVAVAREADA 69
Query: 86 FVVARIDHQTHEIIVDLSLQEITSKKTYNGYGYPLLTEEEQEDANKLASTYPLFVASISK 145
+V R ++ E +VDL + S K P +E + P +A+++K
Sbjct: 70 VLVDRAQARSFEAVVDLEAGTVDSWKLLAENIQPPFMLDEFAECEDACRKDPEVIAALAK 129
Query: 146 RGLKLEEVECGS-FTLGWFGEERKNKRIVKMMCYYLDGTLNAD-MRPIEGITMTVDPDEM 203
RGL ++ C +++G+FGE+ + +R+++ + + D ++ PIE + D +
Sbjct: 130 RGLTNLDLVCFEPWSVGYFGEDNEGRRLMRALVFVRDEADDSPYAHPIENFIVFYDLNAG 189
Query: 204 KIIQFRDRITVLVPKGDGTEYRESKLKPPFRPSLKRTTVVQPDRPSFNIVGSQI 257
K+++ D + VP G K R LK + QP+ SF + G+ +
Sbjct: 190 KVVRLEDDQAIPVPSARGNYL--PKYVGEARTDLKPLNITQPEGASFTVTGNHV 241
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII
PE=1 SV=1
Length = 648
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 9/234 (3%)
Query: 26 HPLDSLTPSEFTQIRSIVTKAYPKSTHNLTFQYVGLEERTKQTVLSWLRNETTTNPPRQA 85
HPLD L+ E + +I+ K P + + F V L E +K LR A
Sbjct: 15 HPLDPLSRVEIARAVAIL-KEGPAAAESFRFISVELREPSKDD----LRAGVAVAREADA 69
Query: 86 FVVARIDHQTHEIIVDLSLQEITSKKTYNGYGYPLLTEEEQEDANKLASTYPLFVASISK 145
+V R ++ E +VDL + S K P +E + P +A+++K
Sbjct: 70 VLVDRAQARSFEAVVDLEAGTVDSWKLLAENIQPPFMLDEFAECEDACRKDPEVIAALAK 129
Query: 146 RGLKLEEVECGS-FTLGWFGEERKNKRIVKMMCYYLDGTLNAD-MRPIEGITMTVDPDEM 203
RGL ++ C +++G+FGE+ + +R+++ + + D ++ PIE + D +
Sbjct: 130 RGLTNLDLVCFEPWSVGYFGEDNEGRRLMRALVFVRDEADDSPYAHPIENFIVFYDLNAG 189
Query: 204 KIIQFRDRITVLVPKGDGTEYRESKLKPPFRPSLKRTTVVQPDRPSFNIVGSQI 257
K+++ D + VP G K R LK + QP+ SF + G+ +
Sbjct: 190 KVVRLEDDQAIPVPSARGNYL--PKYVGEARTDLKPLNITQPEGASFTVTGNHV 241
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1
Length = 755
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 111/237 (46%), Gaps = 12/237 (5%)
Query: 26 HPLDSLTPSEFTQIRSIVTKAYPKSTHNLTFQYVGLEERTKQTVLSWLRNETTTNPPRQA 85
HPL+SL+ +E ++ +IV KA P+ N F + L E K V ++ T + PR A
Sbjct: 124 HPLNSLSAAEISKAVTIV-KAAPEFQPNTRFTEISLHEPDKAAVWAFALQGTPVDAPRTA 182
Query: 86 FVVARIDHQTHEIIVDLSLQEITSKKTYNG-YGYPLLTEEEQEDANKLASTYPLFVASIS 144
VV E +VDL ++I S G +G LL ++ + +T F +
Sbjct: 183 DVVMLDGKHVIEAVVDLQNKKILSWTPIKGAHGMVLL--DDFVSVQNIINTSSEFAEVLK 240
Query: 145 KRGL-KLEEVECGSFTLGWF-GEE--RKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDP 200
K G+ +V T+G+F G++ +++ R++K++ Y G N PIE + VD
Sbjct: 241 KHGITDPGKVVTTPLTVGFFDGKDGLQQDARLLKVVSYLDTGDGNYWAHPIENLVAVVDL 300
Query: 201 DEMKIIQFRDRITVLVPKGDGTEYRESKLKPPFRPSLKRTTVVQPDRPSFNIVGSQI 257
+ KII+ + + VP E R + P++K + +P+ ++ I G I
Sbjct: 301 EAKKIIKIEEGPVIPVP----MEPRPYDGRDRNAPAVKPLEITEPEGKNYTITGDTI 353
>sp|P46883|AMO_ECOLI Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1
SV=1
Length = 757
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 12/237 (5%)
Query: 26 HPLDSLTPSEFTQIRSIVTKAYPKSTHNLTFQYVGLEERTKQTVLSWLRNETTTNPPRQA 85
HPL++LT E Q IV KA N F + L K+ V ++ + PR+A
Sbjct: 124 HPLNALTADEIKQAVEIV-KASADFKPNTRFTEISLLPPDKEAVWAFALENKPVDQPRKA 182
Query: 86 FVVARIDHQTHEIIVDLSLQEITS-KKTYNGYGYPLLTEEEQEDANKLASTYPLFVASIS 144
V+ E +VDL ++ S + + +G LL ++ + + F A++
Sbjct: 183 DVIMLDGKHIIEAVVDLQNNKLLSWQPIKDAHGMVLL--DDFASVQNIINNSEEFAAAVK 240
Query: 145 KRGL-KLEEVECGSFTLGWF-GEE--RKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDP 200
KRG+ ++V T+G+F G++ +++ R++K++ Y G N PIE + VD
Sbjct: 241 KRGITDAKKVITTPLTVGYFDGKDGLKQDARLLKVISYLDVGDGNYWAHPIENLVAVVDL 300
Query: 201 DEMKIIQFRDRITVLVPKGDGTEYRESKLKPPFRPSLKRTTVVQPDRPSFNIVGSQI 257
++ KI++ + V VP R + P++K +++P+ ++ I G I
Sbjct: 301 EQKKIVKIEEGPVVPVP----MTARPFDGRDRVAPAVKPMQIIEPEGKNYTITGDMI 353
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM
4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686)
GN=maoA PE=1 SV=2
Length = 752
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 110/241 (45%), Gaps = 20/241 (8%)
Query: 26 HPLDSLTPSEFTQIRSIVTKAYPKSTHNLTFQYVGLEERTKQTVLSWLRNETTTNPPRQA 85
HPL+SL+ +E + +IV A N F + L E K+ V + N T N PR A
Sbjct: 121 HPLNSLSAAEISAAVAIVKAAA-DFKPNTRFTEISLREPDKKAVWDFALNGTPVNAPRAA 179
Query: 86 FVVARIDHQTHEIIVDLSLQEITS-KKTYNGYGYPLLTEEEQEDANKLASTYPLFVASIS 144
V+ E +VDL +++ S + +G LL ++ + + F +
Sbjct: 180 DVIMLDGKHVIEAVVDLQNKKVLSWTPIKDAHGMVLL--DDFASVQNIINASSEFAEVLK 237
Query: 145 KRGLK-LEEVECGSFTLGWF-GEE--RKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDP 200
K G+ +V T+G+F G++ +++ R++K++ Y G N PIE + VD
Sbjct: 238 KHGIDDPSKVITTPLTVGYFDGKDGLKQDARLLKVVSYLDVGDGNYWAHPIENLVAVVDL 297
Query: 201 DEMKIIQFRDRITVLVPKG----DGTEYRESKLKPPFRPSLKRTTVVQPDRPSFNIVGSQ 256
++ KII+ + T+ VP DG + K+KP +++P+ ++ I G
Sbjct: 298 EQKKIIKIEEGPTIPVPMAARPYDGRDRVAPKIKP--------LDIIEPEGKNYTITGDM 349
Query: 257 I 257
I
Sbjct: 350 I 350
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3
Length = 684
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 112/251 (44%), Gaps = 25/251 (9%)
Query: 19 LIPSHQYHPLDSLTPSEFTQIRSIVTKA--YPKSTHNLTFQYVGLEERTKQTVLSWLRNE 76
L+ + HPL+ L+ E + R I+ +A +ST F Y+GL E K T R
Sbjct: 21 LVHAAAQHPLEQLSAEEIHEARRILAEAGLVGEST---RFAYLGLIEPPKTT-----RQG 72
Query: 77 TTTNPPRQAFVVARIDHQTHEIIVDLSLQE--ITSKKTYNGYG---YPLLTEEEQ--EDA 129
T R + Q+ + V LSL + ++ N P+L EE ED
Sbjct: 73 DVTGAARLVRAMLWDAAQSRSLDVRLSLATGLVVDRRELNPEADGQLPVLLEEFGIIED- 131
Query: 130 NKLASTYPLFVASISKRGLKLEEVECGSFTLGWF--GEERKNKRIVKMMCYYLDGTLNAD 187
+ S P + A+++ RGL +V + G F G E + KR+++ + + D +
Sbjct: 132 --ILSEDPQWNAALTARGLTPAQVRVAPLSAGVFEYGNE-EGKRLLRGLGFRQDHPADHP 188
Query: 188 M-RPIEGITMTVDPDEMKIIQFRDRITVLVPKGDGTEYRESKLKPPFRPSLKRTTVVQPD 246
PI+G+ VD + ++ D V VP+ +G Y + ++ R L ++QP+
Sbjct: 189 WAHPIDGLVAFVDVENRRVNHLIDDGPVPVPEVNGN-YTDPAIRGELRTDLLPIEIMQPE 247
Query: 247 RPSFNIVGSQI 257
PSF + G+ +
Sbjct: 248 GPSFTLEGNHL 258
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1
Length = 638
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 131 KLASTYPLFVASISKRGLKLEEVECGSFTLGWFG-EERKNKRIVKMMCYYLDGTLN-ADM 188
+L +T ++ +++ R L + +V + G F E + +RI++ + + D + A
Sbjct: 110 QLLATDERWLKALAARNLDVSKVRVAPLSAGVFEYAEERGRRILRGLAFVQDFPEDSAWA 169
Query: 189 RPIEGITMTVDPDEMKIIQFRDRITVLVPKGDGTEYRESKLKPPFRPSLKRTTVVQPDRP 248
P++G+ VD ++ + D VP G Y + +L P R + K ++ QP+ P
Sbjct: 170 HPVDGLVAYVDVVSKEVTRVIDTGVFPVPAEHGN-YTDPELTGPLRTTQKPISITQPEGP 228
Query: 249 SFNIVGSQ 256
SF + G
Sbjct: 229 SFTVTGGN 236
>sp|P12807|AMO_PICAN Peroxisomal primary amine oxidase OS=Pichia angusta GN=AMO PE=1
SV=1
Length = 692
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 97/243 (39%), Gaps = 21/243 (8%)
Query: 26 HPLDSLTPSEFTQIRSIVTKAYPKSTHNLTFQYVGLEERTKQTVLSWLRNETTTNPPRQA 85
HPLD L+ +E + V + + ++F V L E ++ + W + + PPR A
Sbjct: 23 HPLDPLSTAEIKAATNTVKSYF--AGKKISFNTVTLREPARKAYIQW-KEQGGPLPPRLA 79
Query: 86 FVVARIDHQ--THEIIVDLSLQEITSKKTYNGYGYPLLTEEEQEDANKLASTYPLFVASI 143
+ V + E +VDL+ + + P+LT E+ ++ P +
Sbjct: 80 YYVILEAGKPGVKEGLVDLASLSVIETRALETV-QPILTVEDLCSTEEVIRNDPAVIEQC 138
Query: 144 SKRGL---KLEEVECGSFTLGWFGEERKNKRIVKMMCYYLDGTLNADMRPIEGITMTVDP 200
G+ ++ +V C +T+G+ KR+ + + YY ++ VD
Sbjct: 139 VLSGIPANEMHKVYCDPWTIGYDERWGTGKRLQQALVYYRSDEDDSQYSHPLDFCPIVDT 198
Query: 201 DEMKIIQFRDRITVLVPKGDGTEYRESKLKP--------PFRPSLKRTTVVQPDRPSFNI 252
+E K+I I + + ++++ + P RP V QP+ SF +
Sbjct: 199 EEKKVI----FIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEGVSFKM 254
Query: 253 VGS 255
G+
Sbjct: 255 TGN 257
>sp|O42890|CAO2_SCHPO Copper amine oxidase-like protein cao2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=cao2 PE=3 SV=1
Length = 794
Score = 41.6 bits (96), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 109/253 (43%), Gaps = 34/253 (13%)
Query: 25 YHPLDSLTPSEFTQIRSIVTKAYPKSTHNLTFQYVGLEERTKQTVLSWLRNETTTN-PPR 83
+ PLD L+ +E + ++V K+YP+ ++F V L E K+ + W + P R
Sbjct: 11 FDPLDPLSFNELRYVVNLVRKSYPEK--QISFDVVTLSEPHKEEYVHWRYSSAHEGIPDR 68
Query: 84 QAFVVARIDH--QTHEIIVDLSLQEITSKKTYNGYGYPLLT--------EEEQEDANKLA 133
+A+V+ E IV+L+ +I K ++ P++T E + DAN +
Sbjct: 69 RAYVIVLEKEVPGVFEGIVNLTTGKI-EKWEHSVDTCPIITADLLAITDEIVRNDANVIE 127
Query: 134 STYPLFVASISKRGLKLEEVECGSFTLGWFGEERKNKRIVKMMCYYLDG------TLNAD 187
+ + + GL V C +T+G+ +R+ + + YY G ++ D
Sbjct: 128 QCK---ICGVPESGLS--NVYCDPWTIGYDERYGSGRRLQQALMYYKPGDSGHLRSIPLD 182
Query: 188 MRPIEGITMTVDPDEMKIIQFR-DRITVLVPKGDGTEYRESKLKPPFRP--SLKRTTVVQ 244
PI +D D+ K+I ++ +P+ ++ KL+ LK + Q
Sbjct: 183 FCPI------IDVDQKKVIAIDIPKVRRPIPQDVNSDNNLKKLEQEMEAMKMLKPLRITQ 236
Query: 245 PDRPSFNIVGSQI 257
P+ +F I G I
Sbjct: 237 PEGVNFRIKGRYI 249
>sp|Q9P7F2|CAO1_SCHPO Copper amine oxidase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=cao1 PE=1 SV=1
Length = 712
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 67/159 (42%), Gaps = 9/159 (5%)
Query: 27 PLDSLTPSEFTQIRSIVTKAYPKSTHNLTFQYVGLEERTKQTVLSWLRNETTTNPPRQAF 86
PLD L+ E I+ YP + + F V LEE K L W ++ + P +
Sbjct: 25 PLDPLSADELKLAVEIIRHEYP--SKHFAFNVVTLEEPPKAKYLHWKYSKEDAHKPERIA 82
Query: 87 VVARIDHQTHEII---VDLSLQEITSKKTYNGYGYPLLTEEEQEDANKLASTYPLFVASI 143
+ ++ I+ V+L+ E+ + G P+LT + + ++ P +
Sbjct: 83 LAVLLEKGVPGILEARVNLTKAEVIQIEHITGVC-PILTADMLVNTEQIVRKDPAVIEQC 141
Query: 144 SKRGL---KLEEVECGSFTLGWFGEERKNKRIVKMMCYY 179
G+ +++ V C +T+G+ +R+ + M YY
Sbjct: 142 ILSGVPPDQMDHVYCDPWTIGYDERYGNTRRMQQAMMYY 180
>sp|B7J7F3|Y977_ACIF2 UPF0234 protein AFE_0977 OS=Acidithiobacillus ferrooxidans (strain
ATCC 23270 / DSM 14882 / NCIB 8455) GN=AFE_0977 PE=3
SV=1
Length = 161
Score = 38.5 bits (88), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 20/127 (15%)
Query: 87 VVARIDHQTHEIIVDLSLQEITSKKTYNGYGYPLLTEEEQ-----EDANKLASTYPLFVA 141
VV+ +D Q + + +++EIT++ + G + +E++ ED KL L A
Sbjct: 6 VVSEVDMQEVDNALHTTVKEITTRYDFKGSKASMERKEKEIILVAEDEYKLGQMIDLLSA 65
Query: 142 SISKRGLKLEEVECGSFTLGWFGEERK------------NKRIVKMM---CYYLDGTLNA 186
+ KRG+ L+ +E G G ER+ +KR++K + + G++
Sbjct: 66 RLVKRGVDLKALEVGKVAAAAGGMERQVLSLKVGLETEVSKRMIKFLKDGKFKAQGSIQG 125
Query: 187 DMRPIEG 193
D + G
Sbjct: 126 DQLRVSG 132
>sp|B5EQ88|Y1091_ACIF5 UPF0234 protein Lferr_1091 OS=Acidithiobacillus ferrooxidans
(strain ATCC 53993) GN=Lferr_1091 PE=3 SV=1
Length = 161
Score = 38.5 bits (88), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 20/127 (15%)
Query: 87 VVARIDHQTHEIIVDLSLQEITSKKTYNGYGYPLLTEEEQ-----EDANKLASTYPLFVA 141
VV+ +D Q + + +++EIT++ + G + +E++ ED KL L A
Sbjct: 6 VVSEVDMQEVDNALHTTVKEITTRYDFKGSKASMERKEKEIILVAEDEYKLGQMIDLLSA 65
Query: 142 SISKRGLKLEEVECGSFTLGWFGEERK------------NKRIVKMM---CYYLDGTLNA 186
+ KRG+ L+ +E G G ER+ +KR++K + + G++
Sbjct: 66 RLVKRGVDLKALEVGKVAAAAGGMERQVLSLKVGLETEVSKRMIKFLKDGKFKAQGSIQG 125
Query: 187 DMRPIEG 193
D + G
Sbjct: 126 DQLRVSG 132
>sp|Q5ZKL5|PPCEL_CHICK Prolyl endopeptidase-like OS=Gallus gallus GN=PREPL PE=2 SV=1
Length = 732
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 4/122 (3%)
Query: 32 TPSEFTQIRSIVTKAYPKSTHNLTFQYVGLEERTKQTVLSWLRNETTTNPPRQAFVVARI 91
T F + S K YPK H + K +L W R+ + P + R+
Sbjct: 4 TAKSFVRWLSSSVKYYPKDNHLQALCLCTKTKLNKCHILDWSRSPCNSAVPPGRILSWRL 63
Query: 92 DHQTHEIIVDLSLQEITSKKTYNGYGYPLLTEEEQEDANKLASTYPLFVASISKRGLKLE 151
E DL +E + T + Y L + EQE+ NK++ +Y I + K+E
Sbjct: 64 -FSCKEGTKDLCKREKIASVTASELLYKDLLKSEQENWNKISRSYKAMTKRIKE---KIE 119
Query: 152 EV 153
E+
Sbjct: 120 EL 121
>sp|Q64605|PTPRS_RAT Receptor-type tyrosine-protein phosphatase S OS=Rattus norvegicus
GN=Ptprs PE=1 SV=2
Length = 1907
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 70 LSWLRNETTTNPPRQAFVV----ARIDHQTHEIIVDLSLQEITSKKTYNGYGYPLLTEEE 125
L++LR T NPP VV A + I++D L+ I ++KT + YG+ L +
Sbjct: 1527 LAFLRRVKTCNPPDAGPVVVHCSAGVGRTGCFIVIDAMLERIRTEKTVDVYGHVTLMRSQ 1586
Query: 126 QEDANKLASTYPLFVASISKRGLKLEEVECGS 157
+ + Y ++ LE V CG+
Sbjct: 1587 RNYMVQTEDQYSFIHEAL------LEAVGCGN 1612
>sp|B0V2N1|PTPRS_MOUSE Receptor-type tyrosine-protein phosphatase S OS=Mus musculus GN=Ptprs
PE=1 SV=1
Length = 1907
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 70 LSWLRNETTTNPPRQAFVV----ARIDHQTHEIIVDLSLQEITSKKTYNGYGYPLLTEEE 125
L++LR T NPP +V A + I++D L+ I ++KT + YG+ L +
Sbjct: 1527 LAFLRRVKTCNPPDAGPIVVHCSAGVGRTGCFIVIDAMLERIKTEKTVDVYGHVTLMRSQ 1586
Query: 126 QEDANKLASTYPLFVASISKRGLKLEEVECGS 157
+ + Y ++ LE V CG+
Sbjct: 1587 RNYMVQTEDQYGFIHEAL------LEAVGCGN 1612
>sp|Q13332|PTPRS_HUMAN Receptor-type tyrosine-protein phosphatase S OS=Homo sapiens GN=PTPRS
PE=1 SV=3
Length = 1948
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 10/92 (10%)
Query: 70 LSWLRNETTTNPPRQAFVV----ARIDHQTHEIIVDLSLQEITSKKTYNGYGYPLLTEEE 125
L++LR T NPP +V A + I++D L+ I +KT + YG+ L +
Sbjct: 1568 LAFLRRVKTCNPPDAGPIVVHCSAGVGRTGCFIVIDAMLERIKPEKTVDVYGHVTLMRSQ 1627
Query: 126 QEDANKLASTYPLFVASISKRGLKLEEVECGS 157
+ + Y ++ LE V CG+
Sbjct: 1628 RNYMVQTEDQYSFIHEAL------LEAVGCGN 1653
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,712,771
Number of Sequences: 539616
Number of extensions: 3802011
Number of successful extensions: 8684
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 8669
Number of HSP's gapped (non-prelim): 24
length of query: 257
length of database: 191,569,459
effective HSP length: 115
effective length of query: 142
effective length of database: 129,513,619
effective search space: 18390933898
effective search space used: 18390933898
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)