Query         036557
Match_columns 122
No_of_seqs    127 out of 1361
Neff          10.1
Searched_HMMs 46136
Date          Fri Mar 29 03:11:40 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036557.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036557hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0197 Tyrosine kinases [Sign  99.8 3.7E-20 8.1E-25  131.2   3.9   86    2-116   378-464 (468)
  2 KOG1026 Nerve growth factor re  99.8 4.6E-20   1E-24  136.5   3.3   89    1-118   678-767 (774)
  3 KOG0192 Tyrosine kinase specif  99.7 2.5E-17 5.5E-22  115.3   7.0   89    3-119   221-309 (362)
  4 KOG1095 Protein tyrosine kinas  99.7 1.2E-17 2.7E-22  127.3   5.4   89    2-119   878-967 (1025)
  5 KOG1187 Serine/threonine prote  99.7 8.4E-17 1.8E-21  112.9   7.7  100    2-115   252-354 (361)
  6 KOG4278 Protein tyrosine kinas  99.7 3.1E-17 6.8E-22  119.7   4.1   85    3-116   441-526 (1157)
  7 PLN00113 leucine-rich repeat r  99.7 2.5E-16 5.5E-21  121.8   8.6  102    3-117   853-955 (968)
  8 KOG0196 Tyrosine kinase, EPH (  99.6 8.3E-18 1.8E-22  124.4  -1.8   84    3-115   809-893 (996)
  9 KOG1024 Receptor-like protein   99.6 1.4E-16 3.1E-21  110.9   4.1   86    3-117   473-559 (563)
 10 PHA02988 hypothetical protein;  99.6 5.1E-16 1.1E-20  105.6   6.4   85    3-115   197-281 (283)
 11 KOG0200 Fibroblast/platelet-de  99.6 3.1E-16 6.7E-21  116.5   4.7   85    3-115   496-581 (609)
 12 smart00750 KIND kinase non-cat  99.6 1.3E-15 2.9E-20   96.6   6.7   93    2-116    78-172 (176)
 13 KOG0193 Serine/threonine prote  99.6 1.4E-15 3.1E-20  110.1   3.4   92    3-119   568-659 (678)
 14 KOG0199 ACK and related non-re  99.6 2.4E-15 5.2E-20  110.9   4.3   79    3-110   290-369 (1039)
 15 KOG4721 Serine/threonine prote  99.6 1.7E-15 3.7E-20  109.7   3.3   85    3-115   286-370 (904)
 16 cd05048 PTKc_Ror Catalytic Dom  99.6 2.6E-15 5.7E-20  101.4   3.9   82    3-113   201-283 (283)
 17 cd05080 PTKc_Tyk2_rpt2 Catalyt  99.6 3.2E-15   7E-20  101.2   3.8   97    3-114   185-282 (283)
 18 cd05102 PTKc_VEGFR3 Catalytic   99.5 1.2E-14 2.5E-19  100.8   5.9   85    3-115   251-336 (338)
 19 PF07714 Pkinase_Tyr:  Protein   99.5 3.3E-15 7.1E-20  100.3   2.8   78    4-110   181-259 (259)
 20 KOG4257 Focal adhesion tyrosin  99.5 4.5E-15 9.7E-20  108.4   3.0   84    3-115   567-651 (974)
 21 cd05094 PTKc_TrkC Catalytic do  99.5 2.7E-14 5.8E-19   97.2   5.9   86    3-117   200-286 (291)
 22 cd05111 PTK_HER3 Pseudokinase   99.5 2.4E-14 5.3E-19   96.9   4.7   85    3-116   186-271 (279)
 23 cd05089 PTKc_Tie1 Catalytic do  99.5 2.5E-14 5.4E-19   97.6   4.5   85    3-116   193-278 (297)
 24 cd05045 PTKc_RET Catalytic dom  99.5 2.3E-14 5.1E-19   97.3   4.2   85    3-116   204-289 (290)
 25 cd05052 PTKc_Abl Catalytic dom  99.5 2.7E-14 5.9E-19   95.7   4.3   82    3-113   180-262 (263)
 26 cd05035 PTKc_Axl_like Catalyti  99.5 3.3E-14 7.2E-19   95.4   4.6   82    3-113   190-272 (273)
 27 cd05043 PTK_Ryk Pseudokinase d  99.5 3.3E-14 7.2E-19   96.0   4.2   85    3-116   194-279 (280)
 28 KOG2345 Serine/threonine prote  99.5   2E-14 4.4E-19   94.8   2.9   87    2-114   215-301 (302)
 29 cd05116 PTKc_Syk Catalytic dom  99.5 2.6E-14 5.6E-19   95.5   3.4   81    3-112   173-254 (257)
 30 cd05064 PTKc_EphR_A10 Catalyti  99.5 3.1E-14 6.8E-19   95.7   3.8   82    3-113   183-265 (266)
 31 cd05106 PTKc_CSF-1R Catalytic   99.5   4E-14 8.8E-19   99.8   4.5   84    3-114   289-373 (374)
 32 cd05093 PTKc_TrkB Catalytic do  99.5 7.7E-14 1.7E-18   94.8   5.7   86    3-117   197-283 (288)
 33 cd05054 PTKc_VEGFR Catalytic d  99.5 5.9E-14 1.3E-18   97.7   5.2   85    3-115   250-335 (337)
 34 cd05036 PTKc_ALK_LTK Catalytic  99.5 3.1E-14 6.7E-19   96.2   3.7   80    3-111   196-276 (277)
 35 cd08228 STKc_Nek6 Catalytic do  99.5 1.1E-13 2.5E-18   92.7   6.2   86    3-114   181-266 (267)
 36 cd05047 PTKc_Tie Catalytic dom  99.5   4E-14 8.8E-19   95.3   3.8   83    3-114   186-269 (270)
 37 cd05063 PTKc_EphR_A2 Catalytic  99.5 5.3E-14 1.1E-18   94.4   4.1   82    3-113   185-267 (268)
 38 cd05060 PTKc_Syk_like Catalyti  99.5 4.4E-14 9.6E-19   94.3   3.5   83    3-114   173-256 (257)
 39 cd05049 PTKc_Trk Catalytic dom  99.5 1.1E-13 2.3E-18   93.4   5.3   81    3-112   199-280 (280)
 40 cd05058 PTKc_Met_Ron Catalytic  99.5 1.4E-13   3E-18   92.0   5.5   84    3-115   177-261 (262)
 41 cd05053 PTKc_FGFR Catalytic do  99.5 6.5E-14 1.4E-18   95.1   4.0   83    3-114   209-292 (293)
 42 cd05115 PTKc_Zap-70 Catalytic   99.5   6E-14 1.3E-18   93.9   3.8   82    3-113   173-255 (257)
 43 cd05075 PTKc_Axl Catalytic dom  99.4 6.4E-14 1.4E-18   94.1   3.6   82    3-113   189-271 (272)
 44 cd05104 PTKc_Kit Catalytic dom  99.4 6.5E-14 1.4E-18   98.8   3.7   83    3-113   291-374 (375)
 45 cd05091 PTKc_Ror2 Catalytic do  99.4 1.5E-13 3.2E-18   93.0   5.2   81    3-112   201-282 (283)
 46 cd05108 PTKc_EGFR Catalytic do  99.4 7.9E-14 1.7E-18   96.0   4.0   84    3-115   186-270 (316)
 47 cd05092 PTKc_TrkA Catalytic do  99.4 6.7E-14 1.4E-18   94.7   3.5   80    3-111   199-279 (280)
 48 KOG1025 Epidermal growth facto  99.4 1.1E-13 2.3E-18  103.8   4.6   83    3-114   875-958 (1177)
 49 cd05098 PTKc_FGFR1 Catalytic d  99.4 2.6E-13 5.6E-18   93.0   6.2   87    3-118   217-304 (307)
 50 cd05044 PTKc_c-ros Catalytic d  99.4 1.9E-13 4.1E-18   91.7   5.3   80    3-111   188-268 (269)
 51 cd05082 PTKc_Csk Catalytic dom  99.4 1.9E-13 4.2E-18   91.2   5.2   82    3-113   174-256 (256)
 52 cd05088 PTKc_Tie2 Catalytic do  99.4 1.5E-13 3.3E-18   94.1   4.8   85    3-116   198-283 (303)
 53 cd05033 PTKc_EphR Catalytic do  99.4 1.4E-13   3E-18   92.4   4.4   82    3-113   183-265 (266)
 54 cd08224 STKc_Nek6_Nek7 Catalyt  99.4 4.3E-13 9.4E-18   89.7   6.7   86    3-114   181-266 (267)
 55 cd05038 PTKc_Jak_rpt2 Catalyti  99.4 1.4E-13 3.1E-18   92.8   4.3   96    3-113   187-283 (284)
 56 PHA02882 putative serine/threo  99.4 1.4E-13   3E-18   94.0   4.2   87    2-110   207-293 (294)
 57 cd05109 PTKc_HER2 Catalytic do  99.4 1.3E-13 2.8E-18   93.2   4.0   85    3-116   186-271 (279)
 58 cd05095 PTKc_DDR2 Catalytic do  99.4 2.4E-13 5.1E-18   92.7   5.2   87    3-111   207-295 (296)
 59 cd05148 PTKc_Srm_Brk Catalytic  99.4 1.4E-13   3E-18   91.9   4.0   82    3-113   179-261 (261)
 60 cd05101 PTKc_FGFR2 Catalytic d  99.4 3.5E-13 7.6E-18   92.2   5.9   86    3-117   214-300 (304)
 61 cd05050 PTKc_Musk Catalytic do  99.4 2.6E-13 5.6E-18   92.1   5.2   81    3-112   207-288 (288)
 62 cd05096 PTKc_DDR1 Catalytic do  99.4 2.2E-13 4.7E-18   93.2   4.8   87    3-111   215-303 (304)
 63 cd05072 PTKc_Lyn Catalytic dom  99.4 1.4E-13   3E-18   92.0   3.8   82    3-113   179-261 (261)
 64 cd05068 PTKc_Frk_like Catalyti  99.4 1.5E-13 3.2E-18   92.0   3.8   81    3-112   179-260 (261)
 65 cd08229 STKc_Nek7 Catalytic do  99.4 5.6E-13 1.2E-17   89.3   6.5   86    3-114   181-266 (267)
 66 cd05114 PTKc_Tec_Rlk Catalytic  99.4   3E-13 6.6E-18   90.3   5.1   79    3-110   176-255 (256)
 67 cd05099 PTKc_FGFR4 Catalytic d  99.4 8.3E-13 1.8E-17   90.8   6.8   86    3-117   211-297 (314)
 68 cd05113 PTKc_Btk_Bmx Catalytic  99.4 1.7E-13 3.6E-18   91.7   3.1   80    3-111   176-256 (256)
 69 cd05105 PTKc_PDGFR_alpha Catal  99.4   2E-13 4.3E-18   97.2   3.6   85    3-115   314-399 (400)
 70 cd05032 PTKc_InsR_like Catalyt  99.4   2E-13 4.3E-18   92.0   3.5   80    3-111   196-276 (277)
 71 KOG0596 Dual specificity; seri  99.4 1.1E-13 2.4E-18   99.7   2.3   80    4-109   548-627 (677)
 72 KOG0194 Protein tyrosine kinas  99.4 7.7E-14 1.7E-18  100.2   1.5   86    3-116   337-423 (474)
 73 cd05065 PTKc_EphR_B Catalytic   99.4 2.6E-13 5.6E-18   91.2   3.9   82    3-113   186-268 (269)
 74 cd05084 PTKc_Fes Catalytic dom  99.4 1.8E-13   4E-18   91.0   3.2   80    3-111   171-251 (252)
 75 cd05090 PTKc_Ror1 Catalytic do  99.4 2.6E-13 5.6E-18   91.9   3.9   81    3-112   201-282 (283)
 76 cd05067 PTKc_Lck_Blk Catalytic  99.4   3E-13 6.5E-18   90.5   4.1   81    3-112   178-259 (260)
 77 cd05070 PTKc_Fyn_Yrk Catalytic  99.4 3.6E-13 7.8E-18   90.1   4.4   81    3-112   178-259 (260)
 78 cd05071 PTKc_Src Catalytic dom  99.4 4.7E-13   1E-17   89.8   4.9   82    3-113   178-260 (262)
 79 KOG0581 Mitogen-activated prot  99.4 4.4E-13 9.5E-18   92.4   4.7   84    2-109   251-335 (364)
 80 cd05059 PTKc_Tec_like Catalyti  99.4 2.5E-13 5.5E-18   90.7   3.3   79    3-110   176-255 (256)
 81 cd05074 PTKc_Tyro3 Catalytic d  99.4 6.9E-13 1.5E-17   89.1   5.3   81    4-113   191-272 (273)
 82 cd08528 STKc_Nek10 Catalytic d  99.4 6.7E-13 1.4E-17   89.1   5.2   81    3-111   188-268 (269)
 83 cd05041 PTKc_Fes_like Catalyti  99.4   4E-13 8.6E-18   89.3   4.0   80    3-111   170-250 (251)
 84 cd05110 PTKc_HER4 Catalytic do  99.4 3.4E-13 7.4E-18   92.3   3.8   85    3-116   186-271 (303)
 85 cd05062 PTKc_IGF-1R Catalytic   99.4 5.7E-13 1.2E-17   89.9   4.7   80    3-111   196-276 (277)
 86 cd05039 PTKc_Csk_like Catalyti  99.4 3.6E-13 7.7E-18   89.8   3.5   82    3-113   174-256 (256)
 87 cd05112 PTKc_Itk Catalytic dom  99.4 3.4E-13 7.3E-18   89.9   3.2   79    3-110   176-255 (256)
 88 cd05085 PTKc_Fer Catalytic dom  99.4 3.6E-13 7.9E-18   89.4   3.3   80    3-111   169-249 (250)
 89 cd05100 PTKc_FGFR3 Catalytic d  99.4 1.3E-12 2.9E-17   90.5   6.2   86    3-117   211-297 (334)
 90 KOG1094 Discoidin domain recep  99.4 3.9E-13 8.4E-18   97.7   3.5   90    2-113   713-804 (807)
 91 cd05069 PTKc_Yes Catalytic dom  99.4 5.7E-13 1.2E-17   89.2   4.1   81    3-112   178-259 (260)
 92 cd05055 PTKc_PDGFR Catalytic d  99.4 5.7E-13 1.2E-17   91.3   4.1   83    3-113   218-301 (302)
 93 cd05083 PTKc_Chk Catalytic dom  99.4 4.6E-13 9.9E-18   89.3   3.6   81    3-112   172-253 (254)
 94 cd05103 PTKc_VEGFR2 Catalytic   99.4 1.1E-12 2.4E-17   91.4   5.6   86    3-116   256-342 (343)
 95 cd05087 PTKc_Aatyk1_Aatyk3 Cat  99.4   1E-12 2.2E-17   88.4   5.0   82    5-111   186-268 (269)
 96 cd05056 PTKc_FAK Catalytic dom  99.4 1.8E-12 3.8E-17   87.2   6.2   85    3-116   183-268 (270)
 97 cd05081 PTKc_Jak2_Jak3_rpt2 Ca  99.4 3.6E-13 7.9E-18   91.1   2.7   98    3-113   186-283 (284)
 98 cd08529 STKc_FA2-like Catalyti  99.4 1.7E-12 3.6E-17   86.4   5.7   78    3-109   176-253 (256)
 99 cd05107 PTKc_PDGFR_beta Cataly  99.3 7.5E-13 1.6E-17   94.3   4.0   84    3-114   316-400 (401)
100 cd05057 PTKc_EGFR_like Catalyt  99.3 9.3E-13   2E-17   89.0   4.3   84    3-115   186-270 (279)
101 cd08218 STKc_Nek1 Catalytic do  99.3 4.1E-13 8.9E-18   89.5   2.5   78    3-109   176-253 (256)
102 cd06640 STKc_MST4 Catalytic do  99.3 1.4E-12 3.1E-17   88.1   5.1   78    3-109   176-253 (277)
103 cd05079 PTKc_Jak1_rpt2 Catalyt  99.3   5E-13 1.1E-17   90.5   2.9   96    3-113   187-283 (284)
104 cd06637 STKc_TNIK Catalytic do  99.3 1.3E-12 2.8E-17   87.8   4.7   78    3-108   191-268 (272)
105 cd05097 PTKc_DDR_like Catalyti  99.3 1.4E-12   3E-17   88.9   4.9   87    3-111   206-294 (295)
106 cd06642 STKc_STK25-YSK1 Cataly  99.3 1.1E-12 2.4E-17   88.5   4.3   78    3-109   176-253 (277)
107 cd05073 PTKc_Hck Catalytic dom  99.3 1.3E-12 2.7E-17   87.5   4.5   81    3-112   178-259 (260)
108 cd06621 PKc_MAPKK_Pek1_like Ca  99.3 3.7E-12 8.1E-17   86.5   6.9   88    3-108   178-265 (287)
109 cd05040 PTKc_Ack_like Catalyti  99.3 2.4E-12 5.2E-17   85.8   5.6   81    3-111   175-256 (257)
110 cd05051 PTKc_DDR Catalytic dom  99.3 1.7E-12 3.6E-17   88.3   4.8   87    3-111   207-295 (296)
111 PLN00034 mitogen-activated pro  99.3 1.6E-12 3.6E-17   90.8   4.8   78    6-109   251-328 (353)
112 cd05066 PTKc_EphR_A Catalytic   99.3 1.2E-12 2.7E-17   87.9   4.0   82    3-113   184-266 (267)
113 cd06605 PKc_MAPKK Catalytic do  99.3   3E-12 6.5E-17   85.6   5.8   84    3-109   174-257 (265)
114 cd06616 PKc_MKK4 Catalytic dom  99.3 1.7E-12 3.7E-17   88.0   4.5   82    4-109   186-267 (288)
115 cd05077 PTK_Jak1_rpt1 Pseudoki  99.3 1.2E-12 2.6E-17   87.9   3.7   77    3-110   184-261 (262)
116 cd05086 PTKc_Aatyk2 Catalytic   99.3 3.1E-12 6.6E-17   86.1   5.7   83    4-111   184-267 (268)
117 cd06609 STKc_MST3_like Catalyt  99.3 1.3E-12 2.8E-17   88.0   3.8   78    3-108   173-250 (274)
118 cd08225 STKc_Nek5 Catalytic do  99.3 1.7E-12 3.7E-17   86.4   4.3   78    3-109   177-254 (257)
119 cd06612 STKc_MST1_2 Catalytic   99.3 1.9E-12 4.2E-17   86.1   4.3   79    3-108   174-252 (256)
120 cd05034 PTKc_Src_like Catalyti  99.3 1.5E-12 3.2E-17   87.0   3.7   81    3-112   179-260 (261)
121 cd06636 STKc_MAP4K4_6 Catalyti  99.3 2.1E-12 4.5E-17   87.4   4.4   78    3-108   201-278 (282)
122 cd06625 STKc_MEKK3_like Cataly  99.3 2.4E-12 5.3E-17   86.0   4.7   78    4-109   183-260 (263)
123 cd06638 STKc_myosinIIIA Cataly  99.3 2.3E-12 5.1E-17   87.2   4.5   80    3-109   204-283 (286)
124 cd06607 STKc_TAO Catalytic dom  99.3   4E-12 8.6E-17   87.1   5.5   79    3-109   189-267 (307)
125 cd00192 PTKc Catalytic domain   99.3 1.9E-12 4.1E-17   86.0   3.8   80    3-111   182-262 (262)
126 cd05078 PTK_Jak2_Jak3_rpt1 Pse  99.3   1E-12 2.2E-17   87.9   2.5   77    4-111   181-258 (258)
127 PTZ00283 serine/threonine prot  99.3 2.5E-12 5.5E-17   93.8   4.4   78    3-109   220-297 (496)
128 cd06643 STKc_SLK Catalytic dom  99.3 3.2E-12   7E-17   86.5   4.7   78    4-108   184-261 (282)
129 cd06639 STKc_myosinIIIB Cataly  99.3 4.5E-12 9.7E-17   86.1   5.4   77    5-108   210-286 (291)
130 cd06608 STKc_myosinIII_like Ca  99.3 4.1E-12 8.9E-17   85.1   5.1   78    4-108   194-271 (275)
131 cd08219 STKc_Nek3 Catalytic do  99.3 1.7E-12 3.8E-17   86.5   3.3   78    3-109   175-252 (255)
132 cd08220 STKc_Nek8 Catalytic do  99.3 3.4E-12 7.3E-17   84.9   4.6   77    3-108   176-252 (256)
133 cd06644 STKc_STK10_LOK Catalyt  99.3 4.5E-12 9.8E-17   86.2   5.2   78    4-108   191-268 (292)
134 cd05042 PTKc_Aatyk Catalytic d  99.3 4.1E-12   9E-17   85.3   4.9   83    4-111   185-268 (269)
135 cd05061 PTKc_InsR Catalytic do  99.3   4E-12 8.6E-17   86.4   4.8   84    3-115   196-280 (288)
136 cd06649 PKc_MEK2 Catalytic dom  99.3 4.5E-12 9.7E-17   87.9   5.0   28    3-30    177-204 (331)
137 cd06620 PKc_MAPKK_Byr1_like Ca  99.3 3.6E-12 7.8E-17   86.4   4.5   92    2-110   176-267 (284)
138 cd08223 STKc_Nek4 Catalytic do  99.3 4.8E-12   1E-16   84.3   4.7   77    3-108   177-253 (257)
139 KOG0591 NIMA (never in mitosis  99.3 5.5E-12 1.2E-16   85.0   4.8   78    2-107   202-279 (375)
140 cd07848 STKc_CDKL5 Catalytic d  99.3 4.9E-12 1.1E-16   85.7   4.7  105    2-108   175-283 (287)
141 cd08217 STKc_Nek2 Catalytic do  99.3 3.3E-12 7.2E-17   85.1   3.8   78    3-109   185-262 (265)
142 cd08221 STKc_Nek9 Catalytic do  99.3 6.3E-12 1.4E-16   83.8   5.1   77    4-109   177-253 (256)
143 cd05076 PTK_Tyk2_rpt1 Pseudoki  99.3 2.9E-12 6.2E-17   86.7   3.5   76    4-110   197-273 (274)
144 cd07859 STKc_TDY_MAPK_plant Ca  99.3 4.3E-12 9.4E-17   87.8   4.3  104    3-109   183-290 (338)
145 cd06613 STKc_MAP4K3_like Catal  99.3 2.9E-12 6.4E-17   85.5   3.4   80    4-108   180-259 (262)
146 cd06654 STKc_PAK1 Catalytic do  99.3 8.2E-12 1.8E-16   85.3   5.6   80    3-109   191-270 (296)
147 cd06646 STKc_MAP4K5 Catalytic   99.3 1.7E-12 3.7E-17   87.0   2.1   81    4-109   185-265 (267)
148 cd06648 STKc_PAK_II Catalytic   99.3   7E-12 1.5E-16   85.2   4.9   79    3-108   190-268 (285)
149 cd08216 PK_STRAD Pseudokinase   99.3 1.2E-11 2.7E-16   84.8   6.1  101    4-109   186-295 (314)
150 cd06624 STKc_ASK Catalytic dom  99.3 4.2E-12 9.1E-17   85.3   3.8   77    5-108   188-264 (268)
151 cd06655 STKc_PAK2 Catalytic do  99.3 7.1E-12 1.5E-16   85.7   4.7   79    3-108   190-268 (296)
152 cd06611 STKc_SLK_like Catalyti  99.3 7.9E-12 1.7E-16   84.4   4.8   79    4-109   184-262 (280)
153 cd06618 PKc_MKK7 Catalytic dom  99.3 5.4E-12 1.2E-16   86.0   4.1   80    4-109   194-273 (296)
154 cd06628 STKc_MAPKKK_Byr2_like   99.3   1E-11 2.3E-16   83.2   5.2   77    3-108   187-263 (267)
155 cd08227 PK_STRAD_alpha Pseudok  99.3 9.1E-12   2E-16   86.2   5.0   27    4-30    186-212 (327)
156 cd06634 STKc_TAO2 Catalytic do  99.2 1.3E-11 2.9E-16   84.7   5.7   79    3-109   189-267 (308)
157 cd06635 STKc_TAO1 Catalytic do  99.2 1.2E-11 2.6E-16   85.2   5.3   80    3-110   199-278 (317)
158 cd06610 STKc_OSR1_SPAK Catalyt  99.2 1.1E-11 2.4E-16   82.8   4.9   81    4-108   183-263 (267)
159 cd07861 STKc_CDK1_euk Catalyti  99.2 8.5E-12 1.8E-16   84.3   4.3  100    4-108   178-281 (285)
160 cd06651 STKc_MEKK3 Catalytic d  99.2 1.2E-11 2.5E-16   83.1   4.9   28    3-30    184-211 (266)
161 cd06917 STKc_NAK1_like Catalyt  99.2 8.7E-12 1.9E-16   84.0   4.3   77    4-108   178-254 (277)
162 KOG0582 Ste20-like serine/thre  99.2 1.3E-11 2.8E-16   87.3   5.2   85    4-108   208-292 (516)
163 cd05631 STKc_GRK4 Catalytic do  99.2 6.2E-12 1.4E-16   85.4   3.4   81    2-108   175-260 (285)
164 cd06617 PKc_MKK3_6 Catalytic d  99.2 9.2E-12   2E-16   84.1   4.2   78    4-108   183-260 (283)
165 KOG2052 Activin A type IB rece  99.2 1.5E-11 3.2E-16   87.0   5.2   93    7-117   405-507 (513)
166 cd06629 STKc_MAPKKK_Bck1_like   99.2 1.2E-11 2.7E-16   83.1   4.7   81    5-109   189-269 (272)
167 cd07846 STKc_CDKL2_3 Catalytic  99.2 9.4E-12   2E-16   84.2   4.1  100    4-108   177-282 (286)
168 cd06622 PKc_MAPKK_PBS2_like Ca  99.2 1.9E-11 4.1E-16   82.8   5.6   80    4-109   183-262 (286)
169 cd07838 STKc_CDK4_6_like Catal  99.2 3.8E-11 8.2E-16   81.1   6.9  102    3-108   181-283 (287)
170 cd06619 PKc_MKK5 Catalytic dom  99.2 7.1E-12 1.5E-16   84.8   3.4   84    3-109   168-253 (279)
171 cd07839 STKc_CDK5 Catalytic do  99.2   9E-12   2E-16   84.2   3.7   27   82-108   254-280 (284)
172 cd06645 STKc_MAP4K3 Catalytic   99.2 6.5E-12 1.4E-16   84.2   3.0   81    3-108   184-264 (267)
173 cd06631 STKc_YSK4 Catalytic do  99.2 1.4E-11 2.9E-16   82.6   4.5   79    3-108   183-261 (265)
174 cd07831 STKc_MOK Catalytic dom  99.2 1.7E-11 3.8E-16   82.6   5.1  102    3-108   174-278 (282)
175 cd05607 STKc_GRK7 Catalytic do  99.2 9.5E-12 2.1E-16   84.2   3.7   80    3-107   169-248 (277)
176 KOG1989 ARK protein kinase fam  99.2 1.3E-11 2.8E-16   92.4   4.4   82    2-115   232-313 (738)
177 smart00219 TyrKc Tyrosine kina  99.2 2.1E-11 4.6E-16   81.0   5.0   79    3-110   179-258 (258)
178 cd07835 STKc_CDK1_like Catalyt  99.2 1.1E-11 2.4E-16   83.8   3.7  100    4-108   176-279 (283)
179 cd06623 PKc_MAPKK_plant_like C  99.2 2.5E-11 5.3E-16   81.0   5.3   80    4-109   176-256 (264)
180 cd06614 STKc_PAK Catalytic dom  99.2 2.8E-11   6E-16   82.1   5.6   79    3-108   191-269 (286)
181 cd08222 STKc_Nek11 Catalytic d  99.2 2.9E-11 6.3E-16   80.8   5.6   76    4-108   181-256 (260)
182 cd07862 STKc_CDK6 Catalytic do  99.2   3E-11 6.4E-16   82.0   5.7  100    3-108   184-286 (290)
183 PTZ00267 NIMA-related protein   99.2 1.5E-11 3.3E-16   89.4   4.4   77    3-108   246-322 (478)
184 cd08226 PK_STRAD_beta Pseudoki  99.2 1.2E-11 2.7E-16   85.5   3.7   36   80-115   279-316 (328)
185 cd07860 STKc_CDK2_3 Catalytic   99.2 2.6E-11 5.5E-16   82.0   5.0  101    5-108   178-280 (284)
186 cd07847 STKc_CDKL1_4 Catalytic  99.2 1.9E-11 4.2E-16   82.5   4.4  104    3-108   176-282 (286)
187 KOG0201 Serine/threonine prote  99.2 9.2E-12   2E-16   87.7   2.6   78    3-109   186-263 (467)
188 cd06650 PKc_MEK1 Catalytic dom  99.2 1.6E-11 3.5E-16   85.3   3.8   28    3-30    177-204 (333)
189 cd05046 PTK_CCK4 Pseudokinase   99.2 2.8E-11 6.1E-16   81.5   4.9   81    3-111   193-274 (275)
190 cd06626 STKc_MEKK4 Catalytic d  99.2   4E-11 8.6E-16   80.1   5.6   78    5-108   183-260 (264)
191 cd06632 STKc_MEKK1_plant Catal  99.2 2.4E-11 5.2E-16   80.8   4.4   76    5-108   179-254 (258)
192 cd07855 STKc_ERK5 Catalytic do  99.2 4.4E-11 9.5E-16   83.0   5.8  102    4-108   188-293 (334)
193 cd08530 STKc_CNK2-like Catalyt  99.2 4.9E-11 1.1E-15   79.2   5.8   77    3-108   176-252 (256)
194 cd05118 STKc_CMGC Catalytic do  99.2 4.7E-11   1E-15   80.5   5.8  103    4-108   175-279 (283)
195 cd07858 STKc_TEY_MAPK_plant Ca  99.2 3.3E-11 7.2E-16   83.7   5.2  107    4-113   185-297 (337)
196 cd05122 PKc_STE Catalytic doma  99.2 2.8E-11   6E-16   79.9   4.6   78    4-108   173-250 (253)
197 cd06633 STKc_TAO3 Catalytic do  99.2 3.1E-11 6.7E-16   83.1   4.9   79    3-109   195-273 (313)
198 PTZ00284 protein kinase; Provi  99.2 4.1E-11 8.8E-16   86.8   5.7   29    2-30    319-347 (467)
199 cd06641 STKc_MST3 Catalytic do  99.2   2E-11 4.4E-16   82.4   3.8   78    3-109   176-253 (277)
200 cd06606 STKc_MAPKKK Catalytic   99.2 4.2E-11 9.1E-16   79.3   5.3   78    4-108   179-256 (260)
201 cd07852 STKc_MAPK15 Catalytic   99.2 3.1E-11 6.7E-16   83.8   4.9  105    4-109   189-295 (337)
202 cd07879 STKc_p38delta_MAPK13 C  99.2 2.6E-11 5.6E-16   84.5   4.3  109    4-113   191-303 (342)
203 PTZ00036 glycogen synthase kin  99.2 1.2E-11 2.6E-16   89.1   2.7  102    4-109   247-351 (440)
204 cd06647 STKc_PAK_I Catalytic d  99.2 2.1E-11 4.5E-16   83.2   3.6   80    3-109   190-269 (293)
205 cd05570 STKc_PKC Catalytic dom  99.2 1.5E-11 3.3E-16   84.9   2.9   77    2-108   170-251 (318)
206 cd06659 STKc_PAK6 Catalytic do  99.2 4.7E-11   1E-15   81.7   5.2   80    3-109   192-271 (297)
207 cd07830 STKc_MAK_like Catalyti  99.2 4.6E-11   1E-15   80.6   5.0   27    4-30    175-201 (283)
208 PHA03212 serine/threonine kina  99.2 5.3E-11 1.1E-15   84.6   5.5  105    3-108   258-375 (391)
209 cd06658 STKc_PAK5 Catalytic do  99.2 4.6E-11   1E-15   81.5   5.0   80    3-109   193-272 (292)
210 cd05609 STKc_MAST Catalytic do  99.2 2.8E-11 6.1E-16   82.9   3.9   83    3-112   191-273 (305)
211 cd05611 STKc_Rim15_like Cataly  99.2 1.2E-11 2.6E-16   82.6   1.9   81    4-110   169-249 (260)
212 cd05605 STKc_GRK4_like Catalyt  99.2 2.3E-11   5E-16   82.6   3.2   80    3-108   176-260 (285)
213 cd07863 STKc_CDK4 Catalytic do  99.2 6.1E-11 1.3E-15   80.3   5.2  103    3-108   182-284 (288)
214 KOG0198 MEKK and related serin  99.1   8E-12 1.7E-16   86.0   0.7   77    7-110   201-277 (313)
215 cd07872 STKc_PCTAIRE2 Catalyti  99.1 4.3E-11 9.4E-16   82.1   4.0  102    4-108   181-285 (309)
216 PHA03390 pk1 serine/threonine-  99.1 5.3E-11 1.2E-15   80.2   4.4   80    3-108   181-261 (267)
217 cd07837 STKc_CdkB_plant Cataly  99.1 2.9E-11 6.2E-16   82.2   3.0  100    4-108   188-290 (295)
218 cd08215 STKc_Nek Catalytic dom  99.1 7.1E-11 1.5E-15   78.3   4.8   77    3-108   178-254 (258)
219 PTZ00266 NIMA-related protein   99.1 4.5E-11 9.8E-16   92.5   4.2   76    4-108   219-294 (1021)
220 cd07869 STKc_PFTAIRE1 Catalyti  99.1 5.9E-11 1.3E-15   81.2   4.5   27    4-30    180-206 (303)
221 cd06615 PKc_MEK Catalytic doma  99.1 9.1E-11   2E-15   80.6   5.3   28    3-30    173-200 (308)
222 cd06656 STKc_PAK3 Catalytic do  99.1 2.7E-11 5.8E-16   82.8   2.6   79    3-108   190-268 (297)
223 cd05630 STKc_GRK6 Catalytic do  99.1 4.2E-11 9.1E-16   81.4   3.6   80    3-108   176-260 (285)
224 cd05037 PTK_Jak_rpt1 Pseudokin  99.1 3.6E-11 7.9E-16   80.1   3.2   76    4-110   182-258 (259)
225 cd07878 STKc_p38beta_MAPK11 Ca  99.1 6.5E-11 1.4E-15   82.4   4.5   27    4-30    192-218 (343)
226 cd07840 STKc_CDK9_like Catalyt  99.1 5.4E-11 1.2E-15   80.3   3.9   99    4-108   178-283 (287)
227 PHA03207 serine/threonine kina  99.1 7.5E-11 1.6E-15   83.7   4.6   29    3-31    262-290 (392)
228 cd07849 STKc_ERK1_2_like Catal  99.1 7.6E-11 1.7E-15   81.9   4.6  101    4-109   186-292 (336)
229 cd05571 STKc_PKB Catalytic dom  99.1   2E-11 4.2E-16   84.5   1.6   76    3-108   170-250 (323)
230 cd05585 STKc_YPK1_like Catalyt  99.1 4.6E-11 9.9E-16   82.2   3.3   71    3-103   168-238 (312)
231 cd05608 STKc_GRK1 Catalytic do  99.1 5.6E-11 1.2E-15   80.6   3.7   81    2-108   171-256 (280)
232 cd07866 STKc_BUR1 Catalytic do  99.1 5.9E-11 1.3E-15   81.0   3.8   26    4-29    203-228 (311)
233 PLN00181 protein SPA1-RELATED;  99.1 5.6E-11 1.2E-15   91.0   4.0   76    2-108   189-264 (793)
234 cd07833 STKc_CDKL Catalytic do  99.1 7.7E-11 1.7E-15   79.7   4.0   99    4-108   178-284 (288)
235 cd07876 STKc_JNK2 Catalytic do  99.1   2E-10 4.3E-15   80.5   6.1   28    3-30    197-224 (359)
236 cd07867 STKc_CDC2L6 Catalytic   99.1 4.6E-11 9.9E-16   82.0   2.9   27    4-30    192-218 (317)
237 cd06630 STKc_MEKK1 Catalytic d  99.1 1.3E-10 2.9E-15   77.8   5.1   81    3-108   183-263 (268)
238 cd07851 STKc_p38 Catalytic dom  99.1 1.2E-10 2.6E-15   81.2   5.0  104    4-108   192-297 (343)
239 cd05592 STKc_nPKC_theta_delta   99.1 5.9E-11 1.3E-15   81.9   3.3   75    3-107   171-246 (316)
240 smart00220 S_TKc Serine/Threon  99.1 1.7E-10 3.6E-15   75.6   5.2   80    3-108   161-240 (244)
241 cd07875 STKc_JNK1 Catalytic do  99.1 9.6E-11 2.1E-15   82.2   4.3   28    3-30    200-227 (364)
242 cd05618 STKc_aPKC_iota Catalyt  99.1 7.5E-11 1.6E-15   81.9   3.6   77    3-103   171-250 (329)
243 cd07850 STKc_JNK Catalytic dom  99.1 2.5E-10 5.3E-15   79.9   6.2   28    3-30    192-219 (353)
244 cd07871 STKc_PCTAIRE3 Catalyti  99.1 7.2E-11 1.6E-15   80.3   3.4  103    3-108   179-284 (288)
245 cd07841 STKc_CDK7 Catalytic do  99.1 1.9E-10 4.1E-15   78.3   5.4  103    4-109   179-282 (298)
246 cd05589 STKc_PKN Catalytic dom  99.1 6.7E-11 1.5E-15   81.8   3.2   70    3-102   176-245 (324)
247 cd05610 STKc_MASTL Catalytic d  99.1 8.9E-11 1.9E-15   88.5   4.1   81    2-109   554-634 (669)
248 cd05619 STKc_nPKC_theta Cataly  99.1 5.9E-11 1.3E-15   82.0   2.9   75    3-107   171-246 (316)
249 cd05633 STKc_GRK3 Catalytic do  99.1 9.2E-11   2E-15   79.5   3.7   79    4-109   172-255 (279)
250 cd05574 STKc_phototropin_like   99.1 1.4E-10   3E-15   79.7   4.6   78    3-108   207-288 (316)
251 cd07856 STKc_Sty1_Hog1 Catalyt  99.1 1.2E-10 2.6E-15   80.8   4.3  105    3-109   181-288 (328)
252 cd07874 STKc_JNK3 Catalytic do  99.1 1.6E-10 3.6E-15   80.7   5.0   28    3-30    193-220 (355)
253 cd05591 STKc_nPKC_epsilon Cata  99.1 5.8E-11 1.3E-15   82.0   2.6   76    3-108   171-253 (321)
254 KOG0589 Serine/threonine prote  99.1 6.6E-11 1.4E-15   84.1   2.9   79    2-109   180-258 (426)
255 cd07854 STKc_MAPK4_6 Catalytic  99.1 1.3E-10 2.8E-15   81.0   4.3   27    4-30    195-221 (342)
256 PF00069 Pkinase:  Protein kina  99.1 1.2E-10 2.5E-15   77.6   3.9   84    2-108   173-256 (260)
257 cd05612 STKc_PRKX_like Catalyt  99.1 5.6E-11 1.2E-15   81.0   2.4   77    3-109   173-254 (291)
258 cd05632 STKc_GRK5 Catalytic do  99.1 6.7E-11 1.5E-15   80.4   2.8   81    2-108   175-260 (285)
259 cd06652 STKc_MEKK2 Catalytic d  99.1 2.4E-10 5.3E-15   76.6   5.4   77    3-108   184-260 (265)
260 cd07829 STKc_CDK_like Catalyti  99.1 3.4E-10 7.3E-15   76.3   6.0  100    4-108   175-278 (282)
261 cd07834 STKc_MAPK Catalytic do  99.1 1.6E-10 3.5E-15   79.8   4.5  109    4-113   183-295 (330)
262 cd05620 STKc_nPKC_delta Cataly  99.1 8.2E-11 1.8E-15   81.2   3.0   75    3-107   171-246 (316)
263 KOG4279 Serine/threonine prote  99.1 2.9E-11 6.3E-16   90.0   0.8   77    5-108   755-831 (1226)
264 cd05595 STKc_PKB_beta Catalyti  99.1 6.6E-11 1.4E-15   81.9   2.5   77    2-108   169-250 (323)
265 PTZ00263 protein kinase A cata  99.1 6.1E-11 1.3E-15   82.3   2.4   76    3-108   190-270 (329)
266 KOG0578 p21-activated serine/t  99.1 1.3E-10 2.9E-15   83.9   4.1   80    3-109   444-523 (550)
267 cd05593 STKc_PKB_gamma Catalyt  99.1 7.1E-11 1.5E-15   82.0   2.6   77    3-109   170-251 (328)
268 cd07853 STKc_NLK Catalytic dom  99.1 5.8E-11 1.3E-15   83.6   2.2  104    4-109   181-288 (372)
269 cd07864 STKc_CDK12 Catalytic d  99.1   2E-10 4.4E-15   78.2   4.7  101    4-108   194-298 (302)
270 cd05590 STKc_nPKC_eta Catalyti  99.1 8.3E-11 1.8E-15   81.3   2.8   71    3-103   171-241 (320)
271 cd06657 STKc_PAK4 Catalytic do  99.1 2.1E-10 4.5E-15   78.3   4.7   79    3-108   191-269 (292)
272 cd07868 STKc_CDK8 Catalytic do  99.1 1.5E-10 3.3E-15   79.5   4.0   27    4-30    192-218 (317)
273 cd05588 STKc_aPKC Catalytic do  99.1 1.5E-10 3.2E-15   80.4   4.0   28    3-30    171-198 (329)
274 cd07865 STKc_CDK9 Catalytic do  99.1 1.4E-10   3E-15   79.2   3.7   26    5-30    201-226 (310)
275 cd07873 STKc_PCTAIRE1 Catalyti  99.1   1E-10 2.2E-15   80.0   3.0  108    4-115   181-294 (301)
276 cd05600 STKc_Sid2p_Dbf2p Catal  99.1 1.6E-10 3.5E-15   80.1   4.1   84    3-109   173-257 (333)
277 KOG1023 Natriuretic peptide re  99.1 3.4E-10 7.4E-15   81.8   5.7   91    5-116   135-227 (484)
278 cd05578 STKc_Yank1 Catalytic d  99.1 2.8E-10 6.2E-15   75.9   5.0   77    4-107   175-253 (258)
279 cd05584 STKc_p70S6K Catalytic   99.1 9.4E-11   2E-15   81.1   2.7   76    3-108   175-255 (323)
280 cd05572 STKc_cGK_PKG Catalytic  99.1 1.6E-10 3.5E-15   77.3   3.8   80    3-108   167-251 (262)
281 cd07836 STKc_Pho85 Catalytic d  99.1 2.3E-10 4.9E-15   77.3   4.5  100    4-108   177-280 (284)
282 cd05579 STKc_MAST_like Catalyt  99.1 1.2E-10 2.5E-15   77.6   3.1   80    4-111   177-256 (265)
283 PLN00009 cyclin-dependent kina  99.0 2.2E-10 4.7E-15   78.0   4.3   99    4-108   180-283 (294)
284 cd07870 STKc_PFTAIRE2 Catalyti  99.0 1.3E-10 2.9E-15   78.9   3.2   27    4-30    180-206 (291)
285 cd07843 STKc_CDC2L1 Catalytic   99.0 1.7E-10 3.6E-15   78.5   3.6   26    5-30    184-209 (293)
286 cd07832 STKc_CCRK Catalytic do  99.0 1.8E-10   4E-15   77.8   3.7   28   82-109   255-282 (286)
287 cd07844 STKc_PCTAIRE_like Cata  99.0 2.2E-10 4.8E-15   77.8   4.1   27    4-30    180-206 (291)
288 PHA03209 serine/threonine kina  99.0 2.8E-10 6.2E-15   79.8   4.6   26   83-108   325-350 (357)
289 cd05616 STKc_cPKC_beta Catalyt  99.0   1E-10 2.2E-15   80.9   2.2   71    3-103   176-246 (323)
290 PTZ00024 cyclin-dependent prot  99.0 2.8E-10 6.1E-15   78.9   4.4  102    4-108   210-312 (335)
291 cd05587 STKc_cPKC Catalytic do  99.0 1.2E-10 2.7E-15   80.5   2.6   71    3-103   176-246 (324)
292 cd07842 STKc_CDK8_like Catalyt  99.0 2.6E-10 5.6E-15   78.1   4.1   28    4-31    192-219 (316)
293 KOG0603 Ribosomal protein S6 k  99.0 1.3E-10 2.8E-15   84.9   2.7   75    3-108   488-562 (612)
294 KOG0983 Mitogen-activated prot  99.0 8.1E-11 1.8E-15   79.3   1.5   81    3-109   269-349 (391)
295 cd05614 STKc_MSK2_N N-terminal  99.0 1.4E-10   3E-15   80.4   2.5   78    5-108   184-266 (332)
296 cd05617 STKc_aPKC_zeta Catalyt  99.0 2.4E-10 5.3E-15   79.2   3.6   78    2-103   170-248 (327)
297 cd05573 STKc_ROCK_NDR_like Cat  99.0 2.5E-10 5.4E-15   79.5   3.6   80    3-109   205-285 (350)
298 cd07845 STKc_CDK10 Catalytic d  99.0 2.4E-10 5.1E-15   78.4   3.4  102    4-109   185-290 (309)
299 PRK13184 pknD serine/threonine  99.0 3.4E-10 7.3E-15   87.2   4.5   87    2-115   205-292 (932)
300 cd05583 STKc_MSK_N N-terminal   99.0 1.8E-10   4E-15   78.1   2.8   83    5-113   185-267 (288)
301 cd07877 STKc_p38alpha_MAPK14 C  99.0 3.5E-10 7.5E-15   79.0   4.2  105    4-109   194-300 (345)
302 cd05601 STKc_CRIK Catalytic do  99.0 1.2E-10 2.5E-15   80.7   1.6   79    3-108   184-262 (330)
303 cd05582 STKc_RSK_N N-terminal   99.0 5.5E-11 1.2E-15   82.0  -0.1   73    3-105   173-245 (318)
304 cd05594 STKc_PKB_alpha Catalyt  99.0 5.5E-11 1.2E-15   82.3  -0.2   78    2-109   170-252 (325)
305 cd05577 STKc_GRK Catalytic dom  99.0 4.5E-10 9.7E-15   75.9   4.2   77    3-105   169-245 (277)
306 cd06627 STKc_Cdc7_like Catalyt  99.0 4.9E-10 1.1E-14   74.3   4.3   76    4-108   175-250 (254)
307 KOG0195 Integrin-linked kinase  99.0 2.2E-10 4.7E-15   77.4   2.5   80    7-114   368-447 (448)
308 KOG0575 Polo-like serine/threo  99.0 1.9E-10 4.1E-15   83.7   2.4   75    5-109   195-269 (592)
309 cd05602 STKc_SGK1 Catalytic do  99.0 1.2E-10 2.7E-15   80.5   1.1   74    3-106   171-244 (325)
310 cd05575 STKc_SGK Catalytic dom  99.0 1.1E-10 2.5E-15   80.6   0.8   72    3-104   171-242 (323)
311 PTZ00426 cAMP-dependent protei  99.0   3E-10 6.6E-15   79.3   2.3   77    3-109   203-284 (340)
312 cd07857 STKc_MPK1 Catalytic do  99.0 8.3E-10 1.8E-14   76.5   4.5  103    4-108   186-291 (332)
313 cd05606 STKc_beta_ARK Catalyti  99.0 8.4E-10 1.8E-14   74.7   4.2   78    4-108   172-254 (278)
314 PHA03211 serine/threonine kina  98.9 1.4E-09 3.1E-14   78.9   5.5   27   83-109   429-455 (461)
315 KOG0661 MAPK related serine/th  98.9 1.1E-09 2.3E-14   78.3   4.7  104    3-109   185-291 (538)
316 cd05604 STKc_SGK3 Catalytic do  98.9 1.4E-10   3E-15   80.3   0.1   73    3-105   171-243 (325)
317 cd06653 STKc_MEKK3_like_1 Cata  98.9 1.8E-09 3.8E-14   72.4   5.3   77    3-108   184-260 (264)
318 KOG0593 Predicted protein kina  98.9 1.6E-09 3.4E-14   74.0   4.8  103    3-108   177-283 (396)
319 cd05581 STKc_PDK1 Catalytic do  98.9 6.6E-10 1.4E-14   74.7   2.7   75    4-108   198-276 (280)
320 cd05596 STKc_ROCK Catalytic do  98.9 1.6E-09 3.4E-14   76.5   4.4   80    4-109   223-304 (370)
321 cd05626 STKc_LATS2 Catalytic d  98.9   2E-09 4.3E-14   76.1   4.8   28    3-30    223-250 (381)
322 cd05123 STKc_AGC Catalytic dom  98.9 8.9E-10 1.9E-14   73.0   2.8   72    4-105   169-240 (250)
323 cd05576 STKc_RPK118_like Catal  98.9 5.2E-10 1.1E-14   74.1   1.6   68    3-104   157-224 (237)
324 cd05615 STKc_cPKC_alpha Cataly  98.9 7.5E-10 1.6E-14   76.7   2.5   71    3-103   176-246 (323)
325 cd05586 STKc_Sck1_like Catalyt  98.9 3.9E-10 8.4E-15   78.2   1.0   27    4-30    173-199 (330)
326 PHA03210 serine/threonine kina  98.9 1.3E-09 2.8E-14   79.8   3.8   27   83-109   428-454 (501)
327 KOG1006 Mitogen-activated prot  98.9 2.2E-10 4.9E-15   76.9  -0.3   81    5-108   246-326 (361)
328 cd05603 STKc_SGK2 Catalytic do  98.9 4.8E-10   1E-14   77.4   1.2   72    3-104   171-242 (321)
329 cd07880 STKc_p38gamma_MAPK12 C  98.9 1.9E-09 4.2E-14   75.2   4.1  104    4-108   192-297 (343)
330 KOG0660 Mitogen-activated prot  98.9 2.3E-09 5.1E-14   74.0   4.1  102    3-109   203-310 (359)
331 KOG0615 Serine/threonine prote  98.8 8.2E-10 1.8E-14   77.7   1.0   79    5-108   358-436 (475)
332 cd05580 STKc_PKA Catalytic dom  98.8 2.6E-09 5.6E-14   72.7   3.4   75    3-107   173-252 (290)
333 KOG0592 3-phosphoinositide-dep  98.8 2.5E-09 5.3E-14   77.5   3.1   77    3-109   262-338 (604)
334 KOG0588 Serine/threonine prote  98.8 6.1E-09 1.3E-13   77.1   4.6   78    2-109   185-263 (786)
335 cd05599 STKc_NDR_like Catalyti  98.8 5.2E-09 1.1E-13   73.4   4.0   28    3-30    214-241 (364)
336 cd05613 STKc_MSK1_N N-terminal  98.8 3.8E-09 8.3E-14   71.7   3.1   78    5-108   185-267 (290)
337 cd05628 STKc_NDR1 Catalytic do  98.8 1.4E-08   3E-13   71.4   5.7   28    3-30    211-238 (363)
338 cd05623 STKc_MRCK_alpha Cataly  98.8   7E-09 1.5E-13   72.0   4.0   27    3-29    183-209 (332)
339 KOG0667 Dual-specificity tyros  98.8 5.8E-09 1.3E-13   76.5   3.6   30    1-30    361-390 (586)
340 PLN03225 Serine/threonine-prot  98.8 8.9E-09 1.9E-13   76.5   4.4   25   85-109   426-450 (566)
341 KOG0579 Ste20-like serine/thre  98.8 9.9E-09 2.1E-13   76.3   4.3   80    3-109   210-289 (1187)
342 KOG0584 Serine/threonine prote  98.7 8.8E-09 1.9E-13   75.5   3.9   79    3-109   218-296 (632)
343 cd05622 STKc_ROCK1 Catalytic d  98.7 1.2E-08 2.6E-13   72.1   4.3   27    4-30    223-249 (371)
344 cd05629 STKc_NDR_like_fungal C  98.7 7.1E-09 1.5E-13   73.2   3.0   28    3-30    223-250 (377)
345 cd05625 STKc_LATS1 Catalytic d  98.7 1.2E-08 2.5E-13   72.2   3.6   28    3-30    223-250 (382)
346 cd05598 STKc_LATS Catalytic do  98.7 6.3E-09 1.4E-13   73.4   2.2   28    3-30    219-246 (376)
347 KOG0583 Serine/threonine prote  98.7 1.6E-08 3.4E-13   71.6   3.4   73    5-107   199-273 (370)
348 KOG0604 MAP kinase-activated p  98.7 3.4E-08 7.3E-13   67.5   4.8   85    3-109   238-322 (400)
349 cd05597 STKc_DMPK_like Catalyt  98.7 3.1E-08 6.6E-13   68.9   4.8   26    4-29    184-209 (331)
350 KOG0671 LAMMER dual specificit  98.7 5.5E-09 1.2E-13   72.9   0.8   31    1-31    282-312 (415)
351 cd05621 STKc_ROCK2 Catalytic d  98.7 2.9E-08 6.2E-13   70.2   4.3   27    4-30    223-249 (370)
352 KOG0597 Serine-threonine prote  98.6 2.4E-08 5.1E-13   73.2   2.9   77    2-108   174-250 (808)
353 cd05624 STKc_MRCK_beta Catalyt  98.6 3.8E-08 8.2E-13   68.4   3.7   27    3-29    183-209 (331)
354 KOG4645 MAPKKK (MAP kinase kin  98.6 6.8E-09 1.5E-13   81.4  -0.2   75    7-109  1420-1494(1509)
355 KOG4717 Serine/threonine prote  98.6 6.9E-08 1.5E-12   70.4   3.9   77    2-108   192-269 (864)
356 cd05627 STKc_NDR2 Catalytic do  98.6 2.8E-08   6E-13   69.8   1.8   28    3-30    211-238 (360)
357 KOG0694 Serine/threonine prote  98.5 5.9E-08 1.3E-12   72.0   2.8   72    2-103   542-613 (694)
358 KOG1035 eIF-2alpha kinase GCN2  98.5 1.7E-07 3.6E-12   73.5   4.7   74    4-108   794-870 (1351)
359 KOG3653 Transforming growth fa  98.5 1.9E-07 4.1E-12   67.0   3.9   35   82-116   472-506 (534)
360 KOG0605 NDR and related serine  98.4 8.9E-08 1.9E-12   69.3   2.1   29    2-30    362-390 (550)
361 KOG0658 Glycogen synthase kina  98.4 1.7E-07 3.7E-12   65.1   3.2  101    3-108   201-305 (364)
362 KOG0984 Mitogen-activated prot  98.4 6.3E-08 1.4E-12   63.2   0.9   40    4-43    228-267 (282)
363 KOG0598 Ribosomal protein S6 k  98.4   6E-08 1.3E-12   67.3   0.8   28    2-29    199-226 (357)
364 KOG1290 Serine/threonine prote  98.4 5.2E-07 1.1E-11   65.2   5.5   95    1-108   424-549 (590)
365 KOG0577 Serine/threonine prote  98.4 4.2E-07 9.2E-12   67.3   4.6   79    3-109   200-278 (948)
366 KOG0599 Phosphorylase kinase g  98.4 1.4E-07   3E-12   64.0   1.8   80    4-109   204-283 (411)
367 KOG0600 Cdc2-related protein k  98.3   5E-07 1.1E-11   65.3   3.9  102    3-108   295-399 (560)
368 KOG0032 Ca2+/calmodulin-depend  98.3 5.4E-07 1.2E-11   64.1   3.4   81    3-109   213-293 (382)
369 KOG0585 Ca2+/calmodulin-depend  98.3 1.8E-07   4E-12   67.3   1.0   77    5-109   296-372 (576)
370 KOG0033 Ca2+/calmodulin-depend  98.3 2.9E-07 6.2E-12   61.7   1.7   79    3-107   187-265 (355)
371 KOG0659 Cdk activating kinase   98.3 1.1E-06 2.4E-11   59.2   4.1   98    3-109   177-281 (318)
372 KOG0594 Protein kinase PCTAIRE  98.2 1.1E-06 2.4E-11   60.7   3.2   99    4-109   197-302 (323)
373 KOG0580 Serine/threonine prote  98.2 9.9E-07 2.1E-11   58.6   2.8   77    3-109   197-273 (281)
374 KOG0595 Serine/threonine-prote  98.2 1.4E-06 2.9E-11   61.6   3.6   29    2-30    188-216 (429)
375 KOG0574 STE20-like serine/thre  98.2 5.2E-07 1.1E-11   62.1   0.9   78    5-109   206-283 (502)
376 KOG0663 Protein kinase PITSLRE  98.2 3.5E-06 7.6E-11   58.6   4.6   28    3-30    253-280 (419)
377 KOG0668 Casein kinase II, alph  98.2 2.2E-06 4.8E-11   57.0   3.5  106    4-109   209-322 (338)
378 cd00180 PKc Catalytic domain o  98.1 2.8E-06 6.1E-11   54.0   3.3   26   84-109   189-214 (215)
379 KOG1151 Tousled-like protein k  98.0 1.3E-06 2.7E-11   63.0   0.6   27    4-30    660-686 (775)
380 KOG0696 Serine/threonine prote  97.9 6.6E-06 1.4E-10   59.0   2.5   29    2-30    524-552 (683)
381 KOG0670 U4/U6-associated splic  97.9   4E-06 8.6E-11   61.4   1.4   32    1-32    608-639 (752)
382 KOG0610 Putative serine/threon  97.9 9.5E-06 2.1E-10   57.7   3.3   75    5-107   312-390 (459)
383 KOG4250 TANK binding protein k  97.9 1.1E-05 2.3E-10   60.6   3.6   30    3-32    199-228 (732)
384 smart00221 STYKc Protein kinas  97.8 1.7E-05 3.7E-10   51.4   2.4   27    3-29    175-201 (225)
385 KOG0611 Predicted serine/threo  97.7 1.5E-05 3.2E-10   57.1   1.6   72    7-109   232-303 (668)
386 PLN03224 probable serine/threo  97.7 4.3E-05 9.3E-10   56.4   3.9   22    8-29    412-434 (507)
387 KOG0614 cGMP-dependent protein  97.7 4.1E-05 8.9E-10   56.2   3.5   26    5-30    596-621 (732)
388 KOG0669 Cyclin T-dependent kin  97.6 0.00022 4.7E-09   48.4   6.0   27    3-29    204-230 (376)
389 KOG0665 Jun-N-terminal kinase   97.6 6.1E-05 1.3E-09   52.2   3.3   26    4-29    193-218 (369)
390 KOG0616 cAMP-dependent protein  97.6 2.6E-05 5.7E-10   53.5   1.3   29    2-30    215-243 (355)
391 KOG1167 Serine/threonine prote  97.6 4.3E-05 9.4E-10   54.3   2.4  104    5-108   255-380 (418)
392 KOG0986 G protein-coupled rece  97.6   4E-05 8.7E-10   55.4   2.1   29    2-30    360-388 (591)
393 KOG0587 Traf2- and Nck-interac  97.5 4.1E-05 8.9E-10   58.9   1.7   79    3-108   203-281 (953)
394 KOG1027 Serine/threonine prote  97.5 1.4E-05   3E-10   61.0  -0.9   75    5-108   691-766 (903)
395 KOG1345 Serine/threonine kinas  97.4 9.3E-05   2E-09   50.6   2.1   38    5-42    202-239 (378)
396 KOG0690 Serine/threonine prote  97.4   8E-05 1.7E-09   52.1   1.7   28    4-31    344-371 (516)
397 KOG0586 Serine/threonine prote  97.3 4.8E-05   1E-09   56.3   0.1   25    6-30    233-257 (596)
398 KOG1240 Protein kinase contain  97.3 0.00029 6.2E-09   56.0   4.0   76    5-110   215-292 (1431)
399 KOG0607 MAP kinase-interacting  97.3 0.00038 8.2E-09   48.7   3.8   29    4-32    267-295 (463)
400 KOG1033 eIF-2alpha kinase PEK/  97.2 0.00031 6.7E-09   51.4   3.2   27    2-28    436-463 (516)
401 KOG0695 Serine/threonine prote  97.2 0.00048   1E-08   48.5   3.4   31    2-32    425-455 (593)
402 PF14531 Kinase-like:  Kinase-l  97.2 0.00025 5.5E-09   48.8   2.0   27    4-30    226-252 (288)
403 KOG0612 Rho-associated, coiled  97.0   0.001 2.3E-08   52.9   4.3   27    3-29    256-282 (1317)
404 KOG0664 Nemo-like MAPK-related  96.8   0.001 2.2E-08   45.7   2.8   27    3-29    233-259 (449)
405 KOG4158 BRPK/PTEN-induced prot  96.5  0.0022 4.7E-08   46.3   2.4   24    7-30    436-459 (598)
406 KOG0666 Cyclin C-dependent kin  96.5  0.0016 3.4E-08   45.6   1.6   28    4-31    216-243 (438)
407 KOG0590 Checkpoint kinase and   96.2  0.0019 4.1E-08   48.9   1.0   81    7-108   504-584 (601)
408 KOG0576 Mitogen-activated prot  96.1  0.0076 1.6E-07   45.9   3.5   81    3-108   190-270 (829)
409 KOG0608 Warts/lats-like serine  95.7  0.0089 1.9E-07   45.6   2.5   30    4-33    847-876 (1034)
410 KOG1093 Predicted protein kina  94.6   0.024 5.3E-07   42.5   2.0   82    6-105   109-190 (725)
411 KOG0662 Cyclin-dependent kinas  94.3   0.065 1.4E-06   35.0   3.3   26    4-29    178-204 (292)
412 COG0515 SPS1 Serine/threonine   94.1    0.14   3E-06   34.2   4.8   28    3-30    186-213 (384)
413 KOG1266 Protein kinase [Signal  93.6    0.03 6.5E-07   39.7   0.8   23   87-109   309-331 (458)
414 KOG0603 Ribosomal protein S6 k  92.3    0.09 1.9E-06   39.8   1.8   26    5-30    168-193 (612)
415 KOG0606 Microtubule-associated  91.5   0.077 1.7E-06   42.7   0.8   28    4-31    234-261 (1205)
416 KOG4236 Serine/threonine prote  88.7   0.024 5.2E-07   42.6  -3.7   27    4-30    742-768 (888)
417 COG4248 Uncharacterized protei  87.0     4.2 9.2E-05   30.4   6.7  102    5-119   198-306 (637)
418 KOG1164 Casein kinase (serine/  80.4     7.6 0.00017   27.1   5.8   89    3-116   212-300 (322)
419 KOG0606 Microtubule-associated  79.0       1 2.2E-05   36.7   1.2   29    3-31   1010-1038(1205)
420 PF05953 Allatostatin:  Allatos  78.1    0.72 1.6E-05   15.8   0.1    9    8-16      2-10  (11)
421 KOG0590 Checkpoint kinase and   76.4    0.51 1.1E-05   36.1  -1.1   27    6-32    208-234 (601)
422 KOG2137 Protein kinase [Signal  61.2     1.6 3.6E-05   33.8  -1.1   24    4-27    185-208 (700)
423 PF08189 Meleagrin:  Meleagrin/  60.7     2.6 5.6E-05   19.7  -0.1    9    7-15     17-25  (39)
424 PF04301 DUF452:  Protein of un  53.7      24 0.00053   23.5   3.5   21   98-118   137-157 (213)
425 PF13220 DUF4028:  Protein of u  46.5      33 0.00071   17.5   2.5   22   97-118    38-59  (65)
426 KOG3960 Myogenic helix-loop-he  44.2      67  0.0015   22.2   4.4   38   81-118   132-176 (284)
427 PF08247 ENOD40:  ENOD40 protei  40.6     5.8 0.00012   13.7  -0.5    8   89-96      1-8   (12)
428 PF15361 RIC3:  Resistance to i  38.7      21 0.00045   22.5   1.4   13   11-23     88-100 (152)
429 PF14707 Sulfatase_C:  C-termin  34.3      71  0.0015   19.2   3.2   19  101-119    79-97  (131)
430 KOG0601 Cyclin-dependent kinas  24.7      41  0.0009   25.7   1.2   26    3-28    302-327 (524)
431 KOG1243 Protein kinase [Genera  24.5      42 0.00092   26.5   1.2   16    9-24    184-199 (690)
432 cd00059 FH Forkhead (FH), also  24.0      74  0.0016   17.5   1.8   29   88-116     9-37  (78)
433 smart00707 RPEL Repeat in Dros  23.7      54  0.0012   14.1   1.0   11   98-108     8-18  (26)
434 PF02755 RPEL:  RPEL repeat;  I  22.9      49  0.0011   14.2   0.8   10   99-108     9-18  (26)
435 PF10866 DUF2704:  Protein of u  22.0      58  0.0012   20.7   1.2   16   10-25     62-77  (168)

No 1  
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.80  E-value=3.7e-20  Score=131.16  Aligned_cols=86  Identities=26%  Similarity=0.369  Sum_probs=65.4

Q ss_pred             CCCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      .++||.|||||||||+||||+| |+.||...     ...+         +.+.++.+.+...+               ..
T Consensus       378 ~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-----sn~e---------v~~~le~GyRlp~P---------------~~  428 (468)
T KOG0197|consen  378 YGKFSSKSDVWSFGVLLWELFTYGRVPYPGM-----SNEE---------VLELLERGYRLPRP---------------EG  428 (468)
T ss_pred             hCCcccccceeehhhhHHHHhccCCCCCCCC-----CHHH---------HHHHHhccCcCCCC---------------CC
Confidence            3689999999999999999999 78887632     2222         22333333333223               38


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      |+..++++|..||+.+|.+||||..+...|+.+...
T Consensus       429 CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  429 CPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             CCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence            899999999999999999999999988888887654


No 2  
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.79  E-value=4.6e-20  Score=136.55  Aligned_cols=89  Identities=20%  Similarity=0.332  Sum_probs=68.0

Q ss_pred             CCCCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            1 MGSEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         1 ~~~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      +.++||++||||||||+||||++ |+.||+...  ..++++.++            .+-.-.++               .
T Consensus       678 ly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS--n~EVIe~i~------------~g~lL~~P---------------e  728 (774)
T KOG1026|consen  678 LYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS--NQEVIECIR------------AGQLLSCP---------------E  728 (774)
T ss_pred             hcCcccchhhhhhhhhhhhhhhccccCcccccc--hHHHHHHHH------------cCCcccCC---------------C
Confidence            46899999999999999999999 888987432  222333322            21112222               2


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhhh
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESFL  118 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~~  118 (122)
                      .|+.+++.||..||+.+|.+||+|++|...|+...+...
T Consensus       729 ~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~  767 (774)
T KOG1026|consen  729 NCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP  767 (774)
T ss_pred             CCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence            888999999999999999999999999999998876544


No 3  
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.71  E-value=2.5e-17  Score=115.33  Aligned_cols=89  Identities=22%  Similarity=0.282  Sum_probs=64.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..|+.|+|||||||++|||+||+.||.....     .+....        .+....+...+               ..++
T Consensus       221 ~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-----~~~~~~--------v~~~~~Rp~~p---------------~~~~  272 (362)
T KOG0192|consen  221 SPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-----VQVASA--------VVVGGLRPPIP---------------KECP  272 (362)
T ss_pred             CcCCccchhhhHHHHHHHHHHCCCCCCCCCH-----HHHHHH--------HHhcCCCCCCC---------------ccCC
Confidence            4699999999999999999999999974321     111111        11111111111               1466


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhhhc
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESFLG  119 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~~~  119 (122)
                      ..+..++..||+.+|..||+|.+++..|+.+......
T Consensus       273 ~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  273 PHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             HHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            7888999999999999999999999999999876553


No 4  
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.71  E-value=1.2e-17  Score=127.28  Aligned_cols=89  Identities=22%  Similarity=0.351  Sum_probs=66.0

Q ss_pred             CCCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      .+.|++|+|||||||++||++| |..||.....     .+.+..        ....+ +-               ..+..
T Consensus       878 d~iFtskSDvWsFGVllWEifslG~~PY~~~~n-----~~v~~~--------~~~gg-RL---------------~~P~~  928 (1025)
T KOG1095|consen  878 DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN-----FEVLLD--------VLEGG-RL---------------DPPSY  928 (1025)
T ss_pred             hcccccccchhhhHHHHHHHHhCCCCCCCCcch-----HHHHHH--------HHhCC-cc---------------CCCCC
Confidence            4679999999999999999999 8889874321     111111        11111 11               11238


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhhhc
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESFLG  119 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~~~  119 (122)
                      |+..++++|..||+.+|.+||+|..++..+..+.....+
T Consensus       929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~  967 (1025)
T KOG1095|consen  929 CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALG  967 (1025)
T ss_pred             CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhcc
Confidence            889999999999999999999999999999998877654


No 5  
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.69  E-value=8.4e-17  Score=112.93  Aligned_cols=100  Identities=34%  Similarity=0.477  Sum_probs=79.6

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccC-CCCCcHHHHHHhhccc-hhHhhcCchhhh-HhhhccCCCCCccchhhH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATF-NEGLTLHEFAKMALPE-KIMEIVDPSILM-ELMANNCMIPEDRGRAKT   78 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   78 (122)
                      ++.++.|+|||||||+|+|+++|+.+.+... .+...+..|.+..... ...+++|+++.. ....              
T Consensus       252 ~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~--------------  317 (361)
T KOG1187|consen  252 TGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPD--------------  317 (361)
T ss_pred             cCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCCh--------------
Confidence            3678999999999999999999999887543 3445588888766665 788899988763 2220              


Q ss_pred             HHHHHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           79 EECLNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        79 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      ......+..++..|++.+|.+||+|.+|++.|+.+..
T Consensus       318 ~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  318 EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            1466778999999999999999999999999966553


No 6  
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.67  E-value=3.1e-17  Score=119.73  Aligned_cols=85  Identities=21%  Similarity=0.321  Sum_probs=65.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..|+.|+|||+|||+||||.| |..||...     .+.         ++..++....+..-               +..|
T Consensus       441 NtFSiKSDVWAFGVLLWEIATYGMsPYPGi-----dlS---------qVY~LLEkgyRM~~---------------PeGC  491 (1157)
T KOG4278|consen  441 NTFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLS---------QVYGLLEKGYRMDG---------------PEGC  491 (1157)
T ss_pred             cccccchhhHHHHHHHHHHHhcCCCCCCCc-----cHH---------HHHHHHhccccccC---------------CCCC
Confidence            468999999999999999998 78888632     121         23334444333322               3488


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      +..+++||+.||+++|.+||+|.++.+.|+.+..+
T Consensus       492 PpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~  526 (1157)
T KOG4278|consen  492 PPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS  526 (1157)
T ss_pred             CHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999988654


No 7  
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.67  E-value=2.5e-16  Score=121.81  Aligned_cols=102  Identities=22%  Similarity=0.428  Sum_probs=74.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc-hhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE-KIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||++||+++|+.||+........+..|.+..... .....+++.+.....             .....
T Consensus       853 ~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~  919 (968)
T PLN00113        853 KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS-------------VNQNE  919 (968)
T ss_pred             CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC-------------ccHHH
Confidence            4688999999999999999999999976555556667776554433 333444544322111             11244


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESF  117 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~  117 (122)
                      ..++.+++.+||+.+|.+||+|.+|++.|+++....
T Consensus       920 ~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~  955 (968)
T PLN00113        920 IVEVMNLALHCTATDPTARPCANDVLKTLESASRSS  955 (968)
T ss_pred             HHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence            567889999999999999999999999999987643


No 8  
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.64  E-value=8.3e-18  Score=124.42  Aligned_cols=84  Identities=17%  Similarity=0.287  Sum_probs=65.0

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      .+|+.+||||||||+|||+++ |.+||=...              .+.+.+.+..+.+-..+               -+|
T Consensus       809 RKFTsASDVWSyGIVmWEVmSyGERPYWdmS--------------NQdVIkaIe~gyRLPpP---------------mDC  859 (996)
T KOG0196|consen  809 RKFTSASDVWSYGIVMWEVMSYGERPYWDMS--------------NQDVIKAIEQGYRLPPP---------------MDC  859 (996)
T ss_pred             cccCchhhccccceEEEEecccCCCcccccc--------------hHHHHHHHHhccCCCCC---------------CCC
Confidence            579999999999999999988 889974221              22333333333332222               389


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      +..+++||+.||+.+..+||.|.+++..|.++..
T Consensus       860 P~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  860 PAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             cHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999854


No 9  
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.64  E-value=1.4e-16  Score=110.86  Aligned_cols=86  Identities=21%  Similarity=0.292  Sum_probs=62.3

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..|+.++|||||||+|||+.| |+.||....+  .+            +...+..+.+-..+               -.|
T Consensus       473 ~~yssasDvWsfGVllWELmtlg~~PyaeIDP--fE------------m~~ylkdGyRlaQP---------------~NC  523 (563)
T KOG1024|consen  473 SHYSSASDVWSFGVLLWELMTLGKLPYAEIDP--FE------------MEHYLKDGYRLAQP---------------FNC  523 (563)
T ss_pred             hhhcchhhhHHHHHHHHHHHhcCCCCccccCH--HH------------HHHHHhccceecCC---------------CCC
Confidence            468999999999999999999 8899863221  11            11111111111111               278


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESF  117 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~  117 (122)
                      +.++..+|..||+..|++||++++++.=|......+
T Consensus       524 PDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql  559 (563)
T KOG1024|consen  524 PDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL  559 (563)
T ss_pred             cHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence            889999999999999999999999998887765544


No 10 
>PHA02988 hypothetical protein; Provisional
Probab=99.64  E-value=5.1e-16  Score=105.57  Aligned_cols=85  Identities=20%  Similarity=0.357  Sum_probs=59.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++||+++|+.||....     ..+.........    ....    .+               ..++
T Consensus       197 ~~~~~k~Di~SlGvil~el~~g~~Pf~~~~-----~~~~~~~i~~~~----~~~~----~~---------------~~~~  248 (283)
T PHA02988        197 SEYTIKDDIYSLGVVLWEIFTGKIPFENLT-----TKEIYDLIINKN----NSLK----LP---------------LDCP  248 (283)
T ss_pred             ccccchhhhhHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhcC----CCCC----CC---------------CcCc
Confidence            468899999999999999999999996321     111111100000    0000    00               1345


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      ..+.+++.+||+.+|.+||++.+++..|+.+..
T Consensus       249 ~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        249 LEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            567889999999999999999999999988764


No 11 
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.63  E-value=3.1e-16  Score=116.50  Aligned_cols=85  Identities=22%  Similarity=0.322  Sum_probs=62.1

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..|+.|||||||||+||||+| |..||..... ...            +.+.+..+               +.+..+..|
T Consensus       496 ~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-~~~------------l~~~l~~G---------------~r~~~P~~c  547 (609)
T KOG0200|consen  496 RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-TEE------------LLEFLKEG---------------NRMEQPEHC  547 (609)
T ss_pred             CcccccchhhHHHHHHHHHhhCCCCCCCCCCc-HHH------------HHHHHhcC---------------CCCCCCCCC
Confidence            469999999999999999999 7888863110 111            11112221               122223377


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      ..+++.+|+.||+.+|.+||+|.++...|...+.
T Consensus       548 ~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  548 SDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             CHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence            8899999999999999999999999999998643


No 12 
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.62  E-value=1.3e-15  Score=96.58  Aligned_cols=93  Identities=18%  Similarity=0.168  Sum_probs=58.7

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..++.++|||||||++||+++|+.||.....-...+..+.....     . ..+....                .....
T Consensus        78 ~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~----------------~~~~~  135 (176)
T smart00750       78 GQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP-----A-DDPRDRS----------------NLESV  135 (176)
T ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc-----c-CCccccc----------------cHHHH
Confidence            356889999999999999999999998632111111111110000     0 0000000                00122


Q ss_pred             H--HHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 L--NAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~--~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      .  ..+.+++..||..+|.+||++.+++..+..+...
T Consensus       136 ~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~  172 (176)
T smart00750      136 SAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE  172 (176)
T ss_pred             HhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence            2  2588999999999999999999999988776554


No 13 
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.57  E-value=1.4e-15  Score=110.06  Aligned_cols=92  Identities=22%  Similarity=0.216  Sum_probs=65.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..|+..+|||||||++|||++|..||.. ...++    ++++...+    .+.+++....                ..++
T Consensus       568 nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dq----IifmVGrG----~l~pd~s~~~----------------s~~p  622 (678)
T KOG0193|consen  568 NPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQ----IIFMVGRG----YLMPDLSKIR----------------SNCP  622 (678)
T ss_pred             CCCCcccchhhhhHHHHHHHhCcCCcCC-CChhh----eEEEeccc----ccCccchhhh----------------ccCH
Confidence            4699999999999999999999999972 21111    11111111    1111111111                2778


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhhhc
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESFLG  119 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~~~  119 (122)
                      +++.+|+..||..++.+||.|.+|+.+|+.+..+.++
T Consensus       623 k~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pk  659 (678)
T KOG0193|consen  623 KAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPK  659 (678)
T ss_pred             HHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccc
Confidence            8999999999999999999999999999988876543


No 14 
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.56  E-value=2.4e-15  Score=110.89  Aligned_cols=79  Identities=20%  Similarity=0.353  Sum_probs=59.6

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      .+|+.+||||+|||++|||+| |..|+....              .-.+.+.+|.+-+-               ..+..|
T Consensus       290 ~kFShaSDvWmyGVTiWEMFtyGEePW~G~~--------------g~qIL~~iD~~erL---------------pRPk~c  340 (1039)
T KOG0199|consen  290 RKFSHASDVWMYGVTIWEMFTYGEEPWVGCR--------------GIQILKNIDAGERL---------------PRPKYC  340 (1039)
T ss_pred             ccccccchhhhhhhhHHhhhccCCCCCCCCC--------------HHHHHHhccccccC---------------CCCCCC
Confidence            579999999999999999999 778875311              11344445533222               222388


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      +++|+.+|+.||+.+|.+||+|..+.+.+
T Consensus       341 sedIY~imk~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  341 SEDIYQIMKNCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             hHHHHHHHHHhccCCccccccHHHHHHhH
Confidence            99999999999999999999999997443


No 15 
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.56  E-value=1.7e-15  Score=109.71  Aligned_cols=85  Identities=18%  Similarity=0.207  Sum_probs=61.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ...++|+||||||||||||+||.-||......     .+++.+.. +.       +.               ...+..|+
T Consensus       286 ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-----AIIwGVGs-Ns-------L~---------------LpvPstcP  337 (904)
T KOG4721|consen  286 EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-----AIIWGVGS-NS-------LH---------------LPVPSTCP  337 (904)
T ss_pred             CCcccccceehhHHHHHHHHhcCCCccccchh-----eeEEeccC-Cc-------cc---------------ccCcccCc
Confidence            46789999999999999999999999743211     11111100 11       11               11223788


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      ..+.-|++.||...|.+||+|.+++.+|.-...
T Consensus       338 ~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~p  370 (904)
T KOG4721|consen  338 DGFKLLLKQCWNSKPRNRPSFRQILLHLDIASP  370 (904)
T ss_pred             hHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCH
Confidence            899999999999999999999999988875543


No 16 
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.56  E-value=2.6e-15  Score=101.43  Aligned_cols=82  Identities=22%  Similarity=0.397  Sum_probs=57.3

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++|||||||+++|+++ |..||.....     .+...         .+........+               ..+
T Consensus       201 ~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-----~~~~~---------~i~~~~~~~~~---------------~~~  251 (283)
T cd05048         201 GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-----QEVIE---------MIRSRQLLPCP---------------EDC  251 (283)
T ss_pred             CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH---------HHHcCCcCCCc---------------ccC
Confidence            467889999999999999998 8889863221     11111         11000000001               145


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++.+||+.+|.+||++.+|+..|+.+
T Consensus       252 ~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         252 PARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence            67789999999999999999999999998753


No 17 
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.55  E-value=3.2e-15  Score=101.17  Aligned_cols=97  Identities=14%  Similarity=0.227  Sum_probs=59.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhcc-chhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALP-EKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++|+.|+................... ....+.++......               ....+
T Consensus       185 ~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~  249 (283)
T cd05080         185 NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLP---------------CPKNC  249 (283)
T ss_pred             cCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCC---------------CCCCC
Confidence            457789999999999999999999975322111100000000000 00111111110000               01134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      +..+.+++..||+.+|++||++.+++..|+.+.
T Consensus       250 ~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         250 PQEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             CHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            567899999999999999999999999998874


No 18 
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.54  E-value=1.2e-14  Score=100.84  Aligned_cols=85  Identities=22%  Similarity=0.258  Sum_probs=58.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||++||+++ |..||...... ..+...+.   .+     ....    .+               ...
T Consensus       251 ~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-~~~~~~~~---~~-----~~~~----~~---------------~~~  302 (338)
T cd05102         251 KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-EEFCQRLK---DG-----TRMR----AP---------------ENA  302 (338)
T ss_pred             CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-HHHHHHHh---cC-----CCCC----CC---------------CCC
Confidence            457899999999999999997 89998642111 01111000   00     0000    00               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      +..+.+++..||+.+|.+||++.++++.|+.+.+
T Consensus       303 ~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         303 TPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            4567899999999999999999999999998875


No 19 
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.54  E-value=3.3e-15  Score=100.28  Aligned_cols=78  Identities=23%  Similarity=0.398  Sum_probs=50.3

Q ss_pred             CCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .++.++||||||+++||+++ ++.||...     ...++.........         ...               ...++
T Consensus       181 ~~~~ksDVysfG~~l~ei~~~~~~p~~~~-----~~~~~~~~~~~~~~---------~~~---------------~~~~~  231 (259)
T PF07714_consen  181 EYTKKSDVYSFGMLLYEILTLGKFPFSDY-----DNEEIIEKLKQGQR---------LPI---------------PDNCP  231 (259)
T ss_dssp             EESHHHHHHHHHHHHHHHHTTSSGTTTTS-----CHHHHHHHHHTTEE---------TTS---------------BTTSB
T ss_pred             ccccccccccccccccccccccccccccc-----cccccccccccccc---------cee---------------ccchh
Confidence            46889999999999999999 67887532     11221111101100         000               01345


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      ..+..++..||..+|.+||++.++++.|
T Consensus       232 ~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  232 KDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            6778999999999999999999999876


No 20 
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.53  E-value=4.5e-15  Score=108.44  Aligned_cols=84  Identities=17%  Similarity=0.278  Sum_probs=64.7

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      .+|+++||||-|||.+||++. |..||......+              +...+..+-+..++               ..|
T Consensus       567 RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD--------------VI~~iEnGeRlP~P---------------~nC  617 (974)
T KOG4257|consen  567 RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD--------------VIGHIENGERLPCP---------------PNC  617 (974)
T ss_pred             hcccchhhHHHHHHHHHHHHHhcCCccccccccc--------------eEEEecCCCCCCCC---------------CCC
Confidence            368999999999999999988 999997433222              11122222222222               278


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      +..++.+|.+||+.+|.+||.|.++...|+.+.+
T Consensus       618 Pp~LYslmskcWayeP~kRPrftei~~~lsdv~q  651 (974)
T KOG4257|consen  618 PPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ  651 (974)
T ss_pred             ChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence            8899999999999999999999999999999877


No 21 
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.51  E-value=2.7e-14  Score=97.17  Aligned_cols=86  Identities=19%  Similarity=0.339  Sum_probs=59.3

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |..||....     ...............         .               ....
T Consensus       200 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~---------~---------------~~~~  250 (291)
T cd05094         200 RKFTTESDVWSFGVILWEIFTYGKQPWFQLS-----NTEVIECITQGRVLE---------R---------------PRVC  250 (291)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhCCCCCC---------C---------------CccC
Confidence            457889999999999999999 899875321     111111000000000         0               0133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESF  117 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~  117 (122)
                      +..+.+++.+||+.+|.+||++.+|++.|+.+....
T Consensus       251 ~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~  286 (291)
T cd05094         251 PKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT  286 (291)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence            456789999999999999999999999999997654


No 22 
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.50  E-value=2.4e-14  Score=96.88  Aligned_cols=85  Identities=13%  Similarity=0.194  Sum_probs=57.0

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||+++||+++ |..||....  ...+.+.+            ........+               ..+
T Consensus       186 ~~~~~~~Dv~slG~il~el~t~g~~p~~~~~--~~~~~~~~------------~~~~~~~~~---------------~~~  236 (279)
T cd05111         186 GRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR--PHEVPDLL------------EKGERLAQP---------------QIC  236 (279)
T ss_pred             CCcCchhhHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHH------------HCCCcCCCC---------------CCC
Confidence            567889999999999999998 888885321  11111111            100000000               022


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      ...+..++..||..+|++||++.+++..|..+...
T Consensus       237 ~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~  271 (279)
T cd05111         237 TIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD  271 (279)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence            34567788999999999999999999999887653


No 23 
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.49  E-value=2.5e-14  Score=97.61  Aligned_cols=85  Identities=24%  Similarity=0.347  Sum_probs=58.7

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++||++ |..||....     .......         +........+               ...
T Consensus       193 ~~~~~~~DvwSlG~il~el~t~g~~pf~~~~-----~~~~~~~---------~~~~~~~~~~---------------~~~  243 (297)
T cd05089         193 SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT-----CAELYEK---------LPQGYRMEKP---------------RNC  243 (297)
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHH---------HhcCCCCCCC---------------CCC
Confidence            457889999999999999997 989986321     1111111         1100000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      +..+.+++.+||..+|.+||++.+++..|+.+.+.
T Consensus       244 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~  278 (297)
T cd05089         244 DDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEA  278 (297)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            45678899999999999999999999999888764


No 24 
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.49  E-value=2.3e-14  Score=97.33  Aligned_cols=85  Identities=21%  Similarity=0.307  Sum_probs=58.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |+.||....  ...+.+.            +........+               ...
T Consensus       204 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~------------~~~~~~~~~~---------------~~~  254 (290)
T cd05045         204 HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--PERLFNL------------LKTGYRMERP---------------ENC  254 (290)
T ss_pred             CCcchHhHHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHH------------HhCCCCCCCC---------------CCC
Confidence            457889999999999999998 888885321  1111111            1100000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      +..+.+++..||+.+|.+||++.+++..|+++...
T Consensus       255 ~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~  289 (290)
T cd05045         255 SEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK  289 (290)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence            45678899999999999999999999999988653


No 25 
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.49  E-value=2.7e-14  Score=95.72  Aligned_cols=82  Identities=20%  Similarity=0.270  Sum_probs=56.1

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++|+++ |..||...     .........     ......    ..               ....
T Consensus       180 ~~~~~~~Dv~slG~il~el~t~g~~p~~~~-----~~~~~~~~~-----~~~~~~----~~---------------~~~~  230 (263)
T cd05052         180 NKFSIKSDVWAFGVLLWEIATYGMSPYPGI-----DLSQVYELL-----EKGYRM----ER---------------PEGC  230 (263)
T ss_pred             CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHH-----HCCCCC----CC---------------CCCC
Confidence            457789999999999999998 88887532     111111110     000000    00               0134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++.+||..+|++||++.++++.|+.+
T Consensus       231 ~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         231 PPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            46778899999999999999999999999875


No 26 
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.49  E-value=3.3e-14  Score=95.37  Aligned_cols=82  Identities=16%  Similarity=0.270  Sum_probs=56.2

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |..||....  ...+.+....   .     ....    .+               ..+
T Consensus       190 ~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~--~~~~~~~~~~---~-----~~~~----~~---------------~~~  240 (273)
T cd05035         190 RVYTSKSDVWAFGVTMWEIATRGQTPYPGVE--NHEIYDYLRH---G-----NRLK----QP---------------EDC  240 (273)
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHc---C-----CCCC----CC---------------cCC
Confidence            457789999999999999999 888875321  1111111100   0     0000    00               134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++.+||+.+|.+||++.+++..|+.+
T Consensus       241 ~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         241 LDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            55778899999999999999999999999875


No 27 
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=99.48  E-value=3.3e-14  Score=96.00  Aligned_cols=85  Identities=22%  Similarity=0.305  Sum_probs=58.5

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||+++||+++ |+.||....  ...+..++..        .....                   ....+
T Consensus       194 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~--------~~~~~-------------------~~~~~  244 (280)
T cd05043         194 KEYSSASDVWSFGVLLWELMTLGQTPYVEID--PFEMAAYLKD--------GYRLA-------------------QPINC  244 (280)
T ss_pred             CCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--HHHHHHHHHc--------CCCCC-------------------CCCcC
Confidence            357889999999999999999 899986321  1111111110        00000                   00133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      +..+.+++..||..+|++||++.+++..|+.+.+.
T Consensus       245 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~  279 (280)
T cd05043         245 PDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ  279 (280)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence            45678999999999999999999999999988754


No 28 
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.48  E-value=2e-14  Score=94.84  Aligned_cols=87  Identities=16%  Similarity=0.222  Sum_probs=60.3

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..+++++|||||||+||+++.|..||+........+.-           ......+.-             +..  ...
T Consensus       215 ~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL-----------Av~n~q~s~-------------P~~--~~y  268 (302)
T KOG2345|consen  215 HCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL-----------AVQNAQISI-------------PNS--SRY  268 (302)
T ss_pred             CcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE-----------eeecccccc-------------CCC--CCc
Confidence            456789999999999999999999999754322211110           111101100             000  035


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      +..+.++...|++.||.+||++.+++..+..+.
T Consensus       269 se~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  269 SEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             cHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            678899999999999999999999999887653


No 29 
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.48  E-value=2.6e-14  Score=95.54  Aligned_cols=81  Identities=26%  Similarity=0.328  Sum_probs=55.0

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++|+++ |..||....  ...+...+.            .......+               ..+
T Consensus       173 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~i~------------~~~~~~~~---------------~~~  223 (257)
T cd05116         173 YKFSSKSDVWSFGVLMWEAFSYGQKPYKGMK--GNEVTQMIE------------SGERMECP---------------QRC  223 (257)
T ss_pred             CCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH------------CCCCCCCC---------------CCC
Confidence            346779999999999999998 889986321  111111111            00000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+.+++..||+.+|.+||++.+|+..|+.
T Consensus       224 ~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         224 PPEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             CHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            4567889999999999999999999998875


No 30 
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.48  E-value=3.1e-14  Score=95.70  Aligned_cols=82  Identities=22%  Similarity=0.294  Sum_probs=55.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++|||||||++||+++ |..||....     .......         +.......               ....+
T Consensus       183 ~~~~~~~Di~slG~~l~ell~~g~~p~~~~~-----~~~~~~~---------~~~~~~~~---------------~~~~~  233 (266)
T cd05064         183 HHFSSASDVWSFGIVMWEVMSYGERPYWDMS-----GQDVIKA---------VEDGFRLP---------------APRNC  233 (266)
T ss_pred             CCccchhHHHHHHHHHHHHhcCCCCCcCcCC-----HHHHHHH---------HHCCCCCC---------------CCCCC
Confidence            567889999999999999775 999986321     1111110         00000000               01144


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++..||+.+|.+||++.++...|+++
T Consensus       234 ~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         234 PNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             CHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            56778899999999999999999999998765


No 31 
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.48  E-value=4e-14  Score=99.81  Aligned_cols=84  Identities=20%  Similarity=0.288  Sum_probs=57.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||++||+++ |+.||....... .+...            .........+               ...
T Consensus       289 ~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~------------~~~~~~~~~~---------------~~~  340 (374)
T cd05106         289 CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKM------------VKRGYQMSRP---------------DFA  340 (374)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHH------------HHcccCccCC---------------CCC
Confidence            467899999999999999997 999986422111 11111            0000000000               022


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      +.++.+++..||+.+|.+||++.+|++.|+++.
T Consensus       341 ~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         341 PPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            456788999999999999999999999999874


No 32 
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.47  E-value=7.7e-14  Score=94.76  Aligned_cols=86  Identities=16%  Similarity=0.284  Sum_probs=58.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++||++ |..||....     ..........+..    . .    .+               ...
T Consensus       197 ~~~~~~sDiwslG~il~~l~t~g~~p~~~~~-----~~~~~~~i~~~~~----~-~----~~---------------~~~  247 (288)
T cd05093         197 RKFTTESDVWSLGVVLWEIFTYGKQPWYQLS-----NNEVIECITQGRV----L-Q----RP---------------RTC  247 (288)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCc----C-C----CC---------------CCC
Confidence            457889999999999999998 888875321     1111110000000    0 0    00               023


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESF  117 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~  117 (122)
                      +..+.+++.+||+.+|.+||++.++...|+.+....
T Consensus       248 ~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~  283 (288)
T cd05093         248 PKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS  283 (288)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence            456789999999999999999999999999988653


No 33 
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.47  E-value=5.9e-14  Score=97.69  Aligned_cols=85  Identities=21%  Similarity=0.242  Sum_probs=58.1

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++|+++ |..||....... .+....            ........+               ...
T Consensus       250 ~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~------------~~~~~~~~~---------------~~~  301 (337)
T cd05054         250 KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRL------------KEGTRMRAP---------------EYA  301 (337)
T ss_pred             CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHH------------hccCCCCCC---------------ccC
Confidence            457889999999999999998 989986321111 010100            000000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      ...+.+++.+||+.+|.+||++.+++..|+.+.+
T Consensus       302 ~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         302 TPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            4567899999999999999999999999998875


No 34 
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.47  E-value=3.1e-14  Score=96.15  Aligned_cols=80  Identities=23%  Similarity=0.365  Sum_probs=54.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++|+++ |..||.....  ..+...            +........+               ...
T Consensus       196 ~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--~~~~~~------------~~~~~~~~~~---------------~~~  246 (277)
T cd05036         196 GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--QEVMEF------------VTGGGRLDPP---------------KGC  246 (277)
T ss_pred             CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH------------HHcCCcCCCC---------------CCC
Confidence            568899999999999999997 8888863211  011111            0000000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++.+||+.+|++||++.+|++.|+
T Consensus       247 ~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         247 PGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            457788999999999999999999999886


No 35 
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.47  E-value=1.1e-13  Score=92.65  Aligned_cols=86  Identities=20%  Similarity=0.242  Sum_probs=57.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||+++||+++|+.||....   .....+...     ......+.                  ......+
T Consensus       181 ~~~~~~~Di~slG~~l~el~~g~~p~~~~~---~~~~~~~~~-----~~~~~~~~------------------~~~~~~~  234 (267)
T cd08228         181 NGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLFSLCQK-----IEQCDYPP------------------LPTEHYS  234 (267)
T ss_pred             CCCCchhhHHHHHHHHHHHhcCCCCCcccc---ccHHHHHHH-----HhcCCCCC------------------CChhhcC
Confidence            356788999999999999999999985321   111111111     00000000                  0011344


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      ..+.+++.+||+.+|++||++.+|++.|+.+.
T Consensus       235 ~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         235 EKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            66789999999999999999999999998763


No 36 
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.47  E-value=4e-14  Score=95.28  Aligned_cols=83  Identities=22%  Similarity=0.324  Sum_probs=56.7

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |..||....     .......         +........               ....
T Consensus       186 ~~~~~~~Di~slG~il~el~~~g~~pf~~~~-----~~~~~~~---------~~~~~~~~~---------------~~~~  236 (270)
T cd05047         186 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELYEK---------LPQGYRLEK---------------PLNC  236 (270)
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCccccC-----HHHHHHH---------HhCCCCCCC---------------CCcC
Confidence            457789999999999999997 889985321     1111110         000000000               0123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      ...+.+++.+||..+|.+||++.+++..|+.+.
T Consensus       237 ~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         237 DDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            456789999999999999999999999999875


No 37 
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=99.46  E-value=5.3e-14  Score=94.42  Aligned_cols=82  Identities=22%  Similarity=0.334  Sum_probs=55.9

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||++||+++ |..||....     .......         +........               ...+
T Consensus       185 ~~~~~~~Dv~slG~il~ell~~g~~p~~~~~-----~~~~~~~---------i~~~~~~~~---------------~~~~  235 (268)
T cd05063         185 RKFTSASDVWSFGIVMWEVMSFGERPYWDMS-----NHEVMKA---------INDGFRLPA---------------PMDC  235 (268)
T ss_pred             CCcChHhHHHHHHHHHHHHHhCCCCCCCcCC-----HHHHHHH---------HhcCCCCCC---------------CCCC
Confidence            456789999999999999998 999985321     1111111         000000000               0134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++..||+.+|++||++.+|+..|+++
T Consensus       236 ~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         236 PSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            45678999999999999999999999999876


No 38 
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.46  E-value=4.4e-14  Score=94.33  Aligned_cols=83  Identities=20%  Similarity=0.308  Sum_probs=57.3

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||+++||+++ |..||....  ...+...+...   ..         ...+               ..+
T Consensus       173 ~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~--~~~~~~~~~~~---~~---------~~~~---------------~~~  223 (257)
T cd05060         173 GKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK--GAEVIAMLESG---ER---------LPRP---------------EEC  223 (257)
T ss_pred             CCCCccchHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHHcC---Cc---------CCCC---------------CCC
Confidence            457789999999999999998 899986321  11111111110   00         0000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      +..+.+++.+||..+|++||++.++.+.|+++.
T Consensus       224 ~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         224 PQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            456788999999999999999999999998763


No 39 
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.46  E-value=1.1e-13  Score=93.38  Aligned_cols=81  Identities=20%  Similarity=0.407  Sum_probs=55.0

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |..||....  .........   .+.         ....               ....
T Consensus       199 ~~~~~~~Di~slG~il~e~~~~g~~p~~~~~--~~~~~~~~~---~~~---------~~~~---------------~~~~  249 (280)
T cd05049         199 RKFTTESDVWSFGVVLWEIFTYGKQPWYGLS--NEEVIECIT---QGR---------LLQR---------------PRTC  249 (280)
T ss_pred             CCcchhhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHH---cCC---------cCCC---------------CCCC
Confidence            567889999999999999998 999985321  111111100   000         0000               0134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+.+++..||+.+|++||++.+|++.|++
T Consensus       250 ~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         250 PSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence            4567899999999999999999999998863


No 40 
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.45  E-value=1.4e-13  Score=92.03  Aligned_cols=84  Identities=20%  Similarity=0.329  Sum_probs=55.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhc-ccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIR-RRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|++++ ..||...     ............     ...                   ......
T Consensus       177 ~~~~~~~Di~slG~~l~el~~~~~~~~~~~-----~~~~~~~~~~~~-----~~~-------------------~~~~~~  227 (262)
T cd05058         177 QKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----DSFDITVYLLQG-----RRL-------------------LQPEYC  227 (262)
T ss_pred             CccchHHHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHhcC-----CCC-------------------CCCCcC
Confidence            4567899999999999999995 4555421     111111110000     000                   000123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      +..+.+++..||+.+|.+||++.+++..|+++..
T Consensus       228 ~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         228 PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            4567889999999999999999999999998753


No 41 
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=99.45  E-value=6.5e-14  Score=95.14  Aligned_cols=83  Identities=25%  Similarity=0.373  Sum_probs=56.5

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||++||+++ |..||....     ..+...         .+........+               ..+
T Consensus       209 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~---------~~~~~~~~~~~---------------~~~  259 (293)
T cd05053         209 RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----VEELFK---------LLKEGYRMEKP---------------QNC  259 (293)
T ss_pred             CCcCcccceeehhhHHHHHhcCCCCCCCCCC-----HHHHHH---------HHHcCCcCCCC---------------CCC
Confidence            457889999999999999998 888875321     111111         00000000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      +..+.+++.+||..+|.+|||+.++++.|+.+.
T Consensus       260 ~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         260 TQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             CHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            456788999999999999999999999998874


No 42 
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.45  E-value=6e-14  Score=93.94  Aligned_cols=82  Identities=20%  Similarity=0.249  Sum_probs=55.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||+++||+++ |..||....  ...+...+.            .......+               ..+
T Consensus       173 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~------------~~~~~~~~---------------~~~  223 (257)
T cd05115         173 RKFSSRSDVWSYGITMWEAFSYGQKPYKKMK--GPEVMSFIE------------QGKRLDCP---------------AEC  223 (257)
T ss_pred             CCCCchhhHHHHHHHHHHHhcCCCCCcCcCC--HHHHHHHHH------------CCCCCCCC---------------CCC
Confidence            456789999999999999996 889986321  111111110            00000001               134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +.++.+++..||..+|++||++.+|.+.|+.+
T Consensus       224 ~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         224 PPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            56778899999999999999999999998765


No 43 
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.44  E-value=6.4e-14  Score=94.11  Aligned_cols=82  Identities=16%  Similarity=0.296  Sum_probs=55.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||+++||+++ |+.||....  ...+...+.   ....   .      ...               ...
T Consensus       189 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~~---~~~~---~------~~~---------------~~~  239 (272)
T cd05075         189 RVYTTKSDVWSFGVTMWEIATRGQTPYPGVE--NSEIYDYLR---QGNR---L------KQP---------------PDC  239 (272)
T ss_pred             CCcChHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHH---cCCC---C------CCC---------------CCC
Confidence            346789999999999999999 788885321  111111110   0000   0      000               033


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++..||+.+|.+||++.+++..|+.+
T Consensus       240 ~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         240 LDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            45678999999999999999999999999875


No 44 
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.44  E-value=6.5e-14  Score=98.76  Aligned_cols=83  Identities=20%  Similarity=0.265  Sum_probs=55.9

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||++||+++ |..||..... ...+...+..            ......+               ...
T Consensus       291 ~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~-~~~~~~~~~~------------~~~~~~~---------------~~~  342 (375)
T cd05104         291 CVYTFESDVWSYGILLWEIFSLGSSPYPGMPV-DSKFYKMIKE------------GYRMLSP---------------ECA  342 (375)
T ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc-hHHHHHHHHh------------CccCCCC---------------CCC
Confidence            467899999999999999998 7888753211 1111111110            0000000               022


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +.++.+++..||+.+|++||++.+|++.|++.
T Consensus       343 ~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         343 PSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            45678999999999999999999999999864


No 45 
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.44  E-value=1.5e-13  Score=93.00  Aligned_cols=81  Identities=20%  Similarity=0.361  Sum_probs=54.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |..||....     ...+.........        . ..+               ..+
T Consensus       201 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~i~~~~~--------~-~~~---------------~~~  251 (283)
T cd05091         201 GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-----NQDVIEMIRNRQV--------L-PCP---------------DDC  251 (283)
T ss_pred             CCCCcchhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHcCCc--------C-CCC---------------CCC
Confidence            567889999999999999998 777775321     1111111000000        0 000               144


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+..++..||+.+|.+||++.+|+..|+.
T Consensus       252 ~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         252 PAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             CHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            5667899999999999999999999998864


No 46 
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.44  E-value=7.9e-14  Score=95.97  Aligned_cols=84  Identities=14%  Similarity=0.220  Sum_probs=56.6

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||+++||+++ |..||....  ...+.....            .......+               ..+
T Consensus       186 ~~~~~~~Di~slGv~l~el~t~g~~p~~~~~--~~~~~~~~~------------~~~~~~~~---------------~~~  236 (316)
T cd05108         186 RIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILE------------KGERLPQP---------------PIC  236 (316)
T ss_pred             CCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHh------------CCCCCCCC---------------CCC
Confidence            457889999999999999998 888886321  001111100            00000000               023


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      ...+..++..||..+|++||++.+++..|..+..
T Consensus       237 ~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~  270 (316)
T cd05108         237 TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  270 (316)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence            4467889999999999999999999999887764


No 47 
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.44  E-value=6.7e-14  Score=94.73  Aligned_cols=80  Identities=21%  Similarity=0.361  Sum_probs=53.7

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++|+++ |..||....  .   ......        ... ......+               ..+
T Consensus       199 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~---~~~~~~--------~~~-~~~~~~~---------------~~~  249 (280)
T cd05092         199 RKFTTESDIWSFGVVLWEIFTYGKQPWYQLS--N---TEAIEC--------ITQ-GRELERP---------------RTC  249 (280)
T ss_pred             CCcCchhhHHHHHHHHHHHHcCCCCCCccCC--H---HHHHHH--------HHc-CccCCCC---------------CCC
Confidence            457889999999999999998 888885321  0   011000        000 0000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++..||+.+|.+||++.+|...|+
T Consensus       250 ~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         250 PPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            456788999999999999999999998886


No 48 
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.44  E-value=1.1e-13  Score=103.78  Aligned_cols=83  Identities=17%  Similarity=0.289  Sum_probs=63.0

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..|+.++|||||||++||++| |..||.....              ..+.+++....+-..+.               -|
T Consensus       875 ~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~--------------~eI~dlle~geRLsqPp---------------iC  925 (1177)
T KOG1025|consen  875 RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPA--------------EEIPDLLEKGERLSQPP---------------IC  925 (1177)
T ss_pred             cCCCchhhhhhhhhhHHHHHhcCCCccCCCCH--------------HHhhHHHhccccCCCCC---------------Cc
Confidence            468999999999999999999 9999874321              12333333333322222               67


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      +.+++.+|.+||..|++.||+|+++...+.++.
T Consensus       926 tiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a  958 (1177)
T KOG1025|consen  926 TIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA  958 (1177)
T ss_pred             cHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence            788999999999999999999999998887654


No 49 
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.44  E-value=2.6e-13  Score=93.02  Aligned_cols=87  Identities=24%  Similarity=0.327  Sum_probs=59.6

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++|+++ |..||...     .............         ..               ......
T Consensus       217 ~~~~~~~DvwslG~~l~el~~~g~~p~~~~-----~~~~~~~~~~~~~---------~~---------------~~~~~~  267 (307)
T cd05098         217 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGV-----PVEELFKLLKEGH---------RM---------------DKPSNC  267 (307)
T ss_pred             CCCCcHHHHHHHHHHHHHHHcCCCCCCCcC-----CHHHHHHHHHcCC---------CC---------------CCCCcC
Confidence            457889999999999999998 77887521     1111111100000         00               000134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhhh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESFL  118 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~~  118 (122)
                      +..+.+++..||+.+|.+||++.+++..|+.+.....
T Consensus       268 ~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~  304 (307)
T cd05098         268 TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS  304 (307)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence            4577889999999999999999999999999987654


No 50 
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.43  E-value=1.9e-13  Score=91.68  Aligned_cols=80  Identities=25%  Similarity=0.398  Sum_probs=54.5

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++|||||||+++|+++ |..||....  .   .+....         +.......               .....
T Consensus       188 ~~~~~~~Dv~slG~il~ellt~g~~p~~~~~--~---~~~~~~---------~~~~~~~~---------------~~~~~  238 (269)
T cd05044         188 GKFTTQSDVWSFGVLMWEILTLGQQPYPALN--N---QEVLQH---------VTAGGRLQ---------------KPENC  238 (269)
T ss_pred             CCcccchhHHHHHHHHHHHHHcCCCCCcccC--H---HHHHHH---------HhcCCccC---------------Ccccc
Confidence            567889999999999999998 888885311  0   111100         00000000               00134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++.+||..+|.+||++.++.+.|+
T Consensus       239 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         239 PDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             hHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            567788999999999999999999999886


No 51 
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.43  E-value=1.9e-13  Score=91.20  Aligned_cols=82  Identities=22%  Similarity=0.304  Sum_probs=55.6

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++|+++ |+.||...     ............     ...    .               ....+
T Consensus       174 ~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~~~-----~~~----~---------------~~~~~  224 (256)
T cd05082         174 KKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEKG-----YKM----D---------------APDGC  224 (256)
T ss_pred             CCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhcC-----CCC----C---------------CCCCC
Confidence            457889999999999999998 88887521     111111110000     000    0               00134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++.+||+.+|++||++.++++.|+.+
T Consensus       225 ~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         225 PPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            55778899999999999999999999988764


No 52 
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.43  E-value=1.5e-13  Score=94.10  Aligned_cols=85  Identities=22%  Similarity=0.322  Sum_probs=57.2

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++|+++ |..||....     ..+....         +........+               ...
T Consensus       198 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~---------~~~~~~~~~~---------------~~~  248 (303)
T cd05088         198 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELYEK---------LPQGYRLEKP---------------LNC  248 (303)
T ss_pred             cCCcccccchhhhhHHHHHHhcCCCCcccCC-----hHHHHHH---------HhcCCcCCCC---------------CCC
Confidence            346789999999999999998 899885321     1111100         0000000000               123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      +..+.+++.+||+.+|++||++.+++..|+.+...
T Consensus       249 ~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~  283 (303)
T cd05088         249 DDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  283 (303)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            44678899999999999999999999999887654


No 53 
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.43  E-value=1.4e-13  Score=92.36  Aligned_cols=82  Identities=20%  Similarity=0.253  Sum_probs=55.9

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |..||....  ...+...+..        ...    ...               ....
T Consensus       183 ~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~--~~~~~~~~~~--------~~~----~~~---------------~~~~  233 (266)
T cd05033         183 RKFTSASDVWSFGIVMWEVMSYGERPYWDMS--NQDVIKAVED--------GYR----LPP---------------PMDC  233 (266)
T ss_pred             CCCccccchHHHHHHHHHHHccCCCCCCCCC--HHHHHHHHHc--------CCC----CCC---------------CCCC
Confidence            457789999999999999998 888885321  1111111100        000    000               0133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++..||+.+|++||++.++++.|+++
T Consensus       234 ~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         234 PSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            45678999999999999999999999999875


No 54 
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.43  E-value=4.3e-13  Score=89.70  Aligned_cols=86  Identities=16%  Similarity=0.183  Sum_probs=57.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||+++||+++|+.||....   .............    ... ..                  .....+
T Consensus       181 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~----~~~-~~------------------~~~~~~  234 (267)
T cd08224         181 NGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEKC----DYP-PL------------------PADHYS  234 (267)
T ss_pred             CCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhhcC----CCC-CC------------------ChhhcC
Confidence            457789999999999999999999985321   1111111100000    000 00                  001334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      ..+.+++..||..+|++||++.+|+..|+.+.
T Consensus       235 ~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         235 EELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            56788999999999999999999999998764


No 55 
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.43  E-value=1.4e-13  Score=92.80  Aligned_cols=96  Identities=21%  Similarity=0.368  Sum_probs=57.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHh-hccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKM-ALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++|..|+................ .........+......               .....+
T Consensus       187 ~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~  251 (284)
T cd05038         187 SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERL---------------PRPPSC  251 (284)
T ss_pred             CCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcC---------------CCCccC
Confidence            457788999999999999999998875322111000000000 0000000111000000               001134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++.+||..+|.+||++.+|+.+|+++
T Consensus       252 ~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         252 PDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             CHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            46788999999999999999999999999876


No 56 
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.43  E-value=1.4e-13  Score=94.02  Aligned_cols=87  Identities=18%  Similarity=0.156  Sum_probs=56.0

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..++.++|||||||+++|+++|+.||....... .+.....   .+..........  ..                ..+
T Consensus       207 ~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-~~~~~~~---~~~~~~~~~~~~--~~----------------~~~  264 (294)
T PHA02882        207 GACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-NLIHAAK---CDFIKRLHEGKI--KI----------------KNA  264 (294)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-HHHHHhH---HHHHHHhhhhhh--cc----------------CCC
Confidence            3457899999999999999999999997432111 1111000   000000000000  00                133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      +..+.+++..||..+|.+||++.++++.|
T Consensus       265 ~~~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        265 NKFIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             CHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            56788999999999999999999998765


No 57 
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.42  E-value=1.3e-13  Score=93.18  Aligned_cols=85  Identities=15%  Similarity=0.226  Sum_probs=57.2

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||++||+++ |..||....  ...+...+..            .......               ..+
T Consensus       186 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~~------------~~~~~~~---------------~~~  236 (279)
T cd05109         186 RRFTHQSDVWSYGVTVWELMTFGAKPYDGIP--AREIPDLLEK------------GERLPQP---------------PIC  236 (279)
T ss_pred             CCCCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHC------------CCcCCCC---------------ccC
Confidence            457889999999999999998 888875321  1111111110            0000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      +..+.+++..||..+|++||++.+++..|+.+...
T Consensus       237 ~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05109         237 TIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD  271 (279)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence            45678899999999999999999999998877543


No 58 
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.42  E-value=2.4e-13  Score=92.72  Aligned_cols=87  Identities=18%  Similarity=0.278  Sum_probs=53.7

Q ss_pred             CCCCCCccchhhhHHHHHHHh--cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI--RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      +.++.++|||||||++||+++  +..||....     ..+.+...     .............            .....
T Consensus       207 ~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~-----~~~~~~~~-----~~~~~~~~~~~~~------------~~~~~  264 (296)
T cd05095         207 GKFTTASDVWAFGVTLWEILTLCKEQPYSQLS-----DEQVIENT-----GEFFRDQGRQVYL------------PKPAL  264 (296)
T ss_pred             CCccchhhhhHHHHHHHHHHHhCCCCCccccC-----hHHHHHHH-----HHHHhhccccccC------------CCCCC
Confidence            567889999999999999998  556764221     11111100     0000000000000            00013


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      ++..+.+++..||+.+|.+||++.+|++.|+
T Consensus       265 ~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         265 CPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            4467889999999999999999999999886


No 59 
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.42  E-value=1.4e-13  Score=91.95  Aligned_cols=82  Identities=27%  Similarity=0.349  Sum_probs=55.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++++++ |+.||....     ..+.....     .......    .               ...+
T Consensus       179 ~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~-----~~~~~~~~-----~~~~~~~----~---------------~~~~  229 (261)
T cd05148         179 GTFSTKSDVWSFGILLYEMFTYGQVPYPGMN-----NHEVYDQI-----TAGYRMP----C---------------PAKC  229 (261)
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCcCC-----HHHHHHHH-----HhCCcCC----C---------------CCCC
Confidence            457789999999999999998 788885321     11111100     0000000    0               0144


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++.+||..+|.+||++.++.+.|+.+
T Consensus       230 ~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         230 PQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            56778999999999999999999999999753


No 60 
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.42  E-value=3.5e-13  Score=92.18  Aligned_cols=86  Identities=23%  Similarity=0.336  Sum_probs=58.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |..||...     ...+..........         ..               ....+
T Consensus       214 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~~~~~~---------~~---------------~~~~~  264 (304)
T cd05101         214 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----PVEELFKLLKEGHR---------MD---------------KPANC  264 (304)
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCcccC-----CHHHHHHHHHcCCc---------CC---------------CCCCC
Confidence            457889999999999999998 67777421     11121111100000         00               00134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESF  117 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~  117 (122)
                      +..+..++.+||+.+|.+||++.++++.|+++....
T Consensus       265 ~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~  300 (304)
T cd05101         265 TNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT  300 (304)
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence            567788999999999999999999999999987653


No 61 
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.42  E-value=2.6e-13  Score=92.06  Aligned_cols=81  Identities=19%  Similarity=0.307  Sum_probs=54.3

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++||++ |..||....     ..+.........        .. ..+               ...
T Consensus       207 ~~~~~~~Dv~slG~il~el~~~~~~p~~~~~-----~~~~~~~~~~~~--------~~-~~~---------------~~~  257 (288)
T cd05050         207 NRYTTESDVWAYGVVLWEIFSYGMQPYYGMA-----HEEVIYYVRDGN--------VL-SCP---------------DNC  257 (288)
T ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhcCC--------CC-CCC---------------CCC
Confidence            467889999999999999998 777875211     111111100000        00 000               123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+.+++.+||+.+|.+||++.++++.|++
T Consensus       258 ~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         258 PLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            4567889999999999999999999998864


No 62 
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.42  E-value=2.2e-13  Score=93.21  Aligned_cols=87  Identities=17%  Similarity=0.235  Sum_probs=53.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhc--ccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIR--RRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      +.++.++||||||++++|++++  ..||....  ...+................     ...+               ..
T Consensus       215 ~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~---------------~~  272 (304)
T cd05096         215 GKFTTASDVWAFGVTLWEILMLCKEQPYGELT--DEQVIENAGEFFRDQGRQVY-----LFRP---------------PP  272 (304)
T ss_pred             CCCCchhhhHHHHHHHHHHHHccCCCCCCcCC--HHHHHHHHHHHhhhcccccc-----ccCC---------------CC
Confidence            4678899999999999999874  44554221  11111111110000000000     0000               13


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      ++..+.+++..||..+|.+||++.+|.+.|+
T Consensus       273 ~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         273 CPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            4567889999999999999999999988875


No 63 
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.42  E-value=1.4e-13  Score=92.04  Aligned_cols=82  Identities=21%  Similarity=0.258  Sum_probs=55.0

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |..||....  .......+.        ......                   .....
T Consensus       179 ~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~--------~~~~~~-------------------~~~~~  229 (261)
T cd05072         179 GSFTIKSDVWSFGILLYEIVTYGKIPYPGMS--NSDVMSALQ--------RGYRMP-------------------RMENC  229 (261)
T ss_pred             CCCChhhhhhhhHHHHHHHHccCCCCCCCCC--HHHHHHHHH--------cCCCCC-------------------CCCCC
Confidence            456778999999999999998 888886321  001111100        000000                   00123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++.+||..+|.+||++.++.+.|+.+
T Consensus       230 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         230 PDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            45678899999999999999999999998753


No 64 
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.42  E-value=1.5e-13  Score=91.96  Aligned_cols=81  Identities=28%  Similarity=0.349  Sum_probs=54.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |+.||....     ......         .+........+               ...
T Consensus       179 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~-----~~~~~~---------~~~~~~~~~~~---------------~~~  229 (261)
T cd05068         179 NRFSIKSDVWSFGILLTEIVTYGRMPYPGMT-----NAEVLQ---------QVDQGYRMPCP---------------PGC  229 (261)
T ss_pred             CCCCchhhHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHH---------HHHcCCCCCCC---------------CcC
Confidence            456789999999999999999 888885321     000000         00000000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+.+++.+||+.+|.+||++.++...|+.
T Consensus       230 ~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         230 PKELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             CHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            4567889999999999999999999999875


No 65 
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.41  E-value=5.6e-13  Score=89.33  Aligned_cols=86  Identities=20%  Similarity=0.260  Sum_probs=57.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||+++||+++|..||.....   .......     .......+..                  .....+
T Consensus       181 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~-----~~~~~~~~~~------------------~~~~~~  234 (267)
T cd08229         181 NGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCK-----KIEQCDYPPL------------------PSDHYS  234 (267)
T ss_pred             CCccchhhHHHHHHHHHHHHhCCCCcccccc---hHHHHhh-----hhhcCCCCCC------------------Cccccc
Confidence            3467789999999999999999999853211   1111100     0000000000                  001345


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      ..+.+++.+||..+|.+|||+.+|++.++++.
T Consensus       235 ~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         235 EELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            67788999999999999999999999988763


No 66 
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.41  E-value=3e-13  Score=90.26  Aligned_cols=79  Identities=22%  Similarity=0.269  Sum_probs=52.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |+.||....     ..+.......+..  ...       +               ...
T Consensus       176 ~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~-----~~~~~~~i~~~~~--~~~-------~---------------~~~  226 (256)
T cd05114         176 SKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS-----NYEVVEMISRGFR--LYR-------P---------------KLA  226 (256)
T ss_pred             CccchhhhhHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHCCCC--CCC-------C---------------CCC
Confidence            356789999999999999999 888885321     1111111000000  000       0               022


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      +..+.+++.+||+.+|.+||++.+++..|
T Consensus       227 ~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         227 SMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            34678899999999999999999999876


No 67 
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.40  E-value=8.3e-13  Score=90.82  Aligned_cols=86  Identities=22%  Similarity=0.318  Sum_probs=58.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||+++||+++ |..||....     ..............         ..+               ..+
T Consensus       211 ~~~~~~~DiwslG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~---------~~~---------------~~~  261 (314)
T cd05099         211 RVYTHQSDVWSFGILMWEIFTLGGSPYPGIP-----VEELFKLLREGHRM---------DKP---------------SNC  261 (314)
T ss_pred             CCcCccchhhHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCC---------CCC---------------CCC
Confidence            457889999999999999999 788875321     11111100000000         000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESF  117 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~  117 (122)
                      +..+.+++.+||..+|.+||++.+++..|.++....
T Consensus       262 ~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~  297 (314)
T cd05099         262 THELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV  297 (314)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence            456778999999999999999999999999987654


No 68 
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.40  E-value=1.7e-13  Score=91.72  Aligned_cols=80  Identities=18%  Similarity=0.192  Sum_probs=52.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||+++||+++ |..||....  ...+.....        .....    ..+               ...
T Consensus       176 ~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~~~~~~~--------~~~~~----~~~---------------~~~  226 (256)
T cd05113         176 SKFSSKSDVWAFGVLMWEVYSLGKMPYERFN--NSETVEKVS--------QGLRL----YRP---------------HLA  226 (256)
T ss_pred             CcccchhHHHHHHHHHHHHhcCCCCCcCcCC--HHHHHHHHh--------cCCCC----CCC---------------CCC
Confidence            457889999999999999998 888875321  000101000        00000    000               022


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++..||+.+|.+||++.+++..|+
T Consensus       227 ~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         227 SEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            456788999999999999999999988763


No 69 
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.40  E-value=2e-13  Score=97.22  Aligned_cols=85  Identities=20%  Similarity=0.218  Sum_probs=57.7

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||++||+++ |..||....... .+...+        ......                   .....+
T Consensus       314 ~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~-~~~~~~--------~~~~~~-------------------~~~~~~  365 (400)
T cd05105         314 NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS-TFYNKI--------KSGYRM-------------------AKPDHA  365 (400)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-HHHHHH--------hcCCCC-------------------CCCccC
Confidence            457889999999999999997 888886321110 000000        000000                   000134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      +..+.+++..||+.+|++||++.+|.+.|+++..
T Consensus       366 ~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         366 TQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             CHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            5677899999999999999999999999998754


No 70 
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=99.40  E-value=2e-13  Score=91.95  Aligned_cols=80  Identities=24%  Similarity=0.385  Sum_probs=54.3

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++|||||||+++|+++ |..||....  ...+.....           ... ....+               ..+
T Consensus       196 ~~~~~~~Di~slG~il~el~t~g~~p~~~~~--~~~~~~~~~-----------~~~-~~~~~---------------~~~  246 (277)
T cd05032         196 GVFTTKSDVWSFGVVLWEMATLAEQPYQGLS--NEEVLKFVI-----------DGG-HLDLP---------------ENC  246 (277)
T ss_pred             CCCCcccchHHHHHHHHHhhccCCCCCccCC--HHHHHHHHh-----------cCC-CCCCC---------------CCC
Confidence            457889999999999999998 888875211  111111110           000 00000               123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++..||+.+|++||++.+++..|+
T Consensus       247 ~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         247 PDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            567789999999999999999999998875


No 71 
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.40  E-value=1.1e-13  Score=99.73  Aligned_cols=80  Identities=21%  Similarity=0.333  Sum_probs=55.7

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      +++.+|||||+|||||+|+.|+.||..       +...     ..++..+.++...-..+.              .....
T Consensus       548 Ki~r~SDvWSLGCILYqMvYgktPf~~-------~~n~-----~aKl~aI~~P~~~Iefp~--------------~~~~~  601 (677)
T KOG0596|consen  548 KISRKSDVWSLGCILYQMVYGKTPFGQ-------IINQ-----IAKLHAITDPNHEIEFPD--------------IPEND  601 (677)
T ss_pred             eecCccchhhhhhHHHHHHhcCCchHH-------HHHH-----HHHHHhhcCCCccccccC--------------CCCch
Confidence            478999999999999999999999862       1111     123344445433222220              01123


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ++.++|+.|++.||.+||++.+++..
T Consensus       602 ~li~~mK~CL~rdPkkR~si~eLLqh  627 (677)
T KOG0596|consen  602 ELIDVMKCCLARDPKKRWSIPELLQH  627 (677)
T ss_pred             HHHHHHHHHHhcCcccCCCcHHHhcC
Confidence            48999999999999999999998753


No 72 
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.40  E-value=7.7e-14  Score=100.16  Aligned_cols=86  Identities=26%  Similarity=0.318  Sum_probs=61.1

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.||.++|||||||++||+++ |..||....     ..+...        .+.....+...               +...
T Consensus       337 ~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~-----~~~v~~--------kI~~~~~r~~~---------------~~~~  388 (474)
T KOG0194|consen  337 GIFSFKTDVWSFGVLLWEIFENGAEPYPGMK-----NYEVKA--------KIVKNGYRMPI---------------PSKT  388 (474)
T ss_pred             CccccccchhheeeeEEeeeccCCCCCCCCC-----HHHHHH--------HHHhcCccCCC---------------CCCC
Confidence            579999999999999999999 788987321     111111        11111111111               1255


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      +..+..++..||..+|++||+|.++.+.|+.+...
T Consensus       389 p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~  423 (474)
T KOG0194|consen  389 PKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKK  423 (474)
T ss_pred             HHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhc
Confidence            66778888999999999999999999999988664


No 73 
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.40  E-value=2.6e-13  Score=91.18  Aligned_cols=82  Identities=17%  Similarity=0.249  Sum_probs=55.2

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |..||....  ...+...+.        ....    ..               ....+
T Consensus       186 ~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~--~~~~~~~i~--------~~~~----~~---------------~~~~~  236 (269)
T cd05065         186 RKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVINAIE--------QDYR----LP---------------PPMDC  236 (269)
T ss_pred             CcccchhhhhhhHHHHHHHhcCCCCCCCCCC--HHHHHHHHH--------cCCc----CC---------------CcccC
Confidence            456889999999999999886 888885321  011111110        0000    00               00134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++..||..+|++||++.+++..|+++
T Consensus       237 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         237 PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            45678899999999999999999999998765


No 74 
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=99.39  E-value=1.8e-13  Score=91.02  Aligned_cols=80  Identities=28%  Similarity=0.354  Sum_probs=53.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |..||.....     ..         ....+........+               ...
T Consensus       171 ~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-----~~---------~~~~~~~~~~~~~~---------------~~~  221 (252)
T cd05084         171 GRYSSESDVWSFGILLWEAFSLGAVPYANLSN-----QQ---------TREAIEQGVRLPCP---------------ELC  221 (252)
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCccccCH-----HH---------HHHHHHcCCCCCCc---------------ccC
Confidence            456788999999999999998 8888753210     00         00001000000001               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++.+||+.+|++||++.++.+.|+
T Consensus       222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            457788999999999999999999998875


No 75 
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.39  E-value=2.6e-13  Score=91.86  Aligned_cols=81  Identities=21%  Similarity=0.353  Sum_probs=54.2

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |..||....  ...+.+.+..   ...    .     ..+               ..+
T Consensus       201 ~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~---~~~----~-----~~~---------------~~~  251 (283)
T cd05090         201 GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--NQEVIEMVRK---RQL----L-----PCS---------------EDC  251 (283)
T ss_pred             CCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHc---CCc----C-----CCC---------------CCC
Confidence            457889999999999999998 888885311  1111111110   000    0     000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+..++..||+.+|.+||++.++.+.|..
T Consensus       252 ~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         252 PPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             CHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            4567889999999999999999999988764


No 76 
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.39  E-value=3e-13  Score=90.47  Aligned_cols=81  Identities=26%  Similarity=0.345  Sum_probs=54.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |+.||....     .......         +........+               ...
T Consensus       178 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~---------~~~~~~~~~~---------------~~~  228 (260)
T cd05067         178 GTFTIKSDVWSFGILLTEIVTYGRIPYPGMT-----NPEVIQN---------LERGYRMPRP---------------DNC  228 (260)
T ss_pred             CCcCcccchHHHHHHHHHHHhCCCCCCCCCC-----hHHHHHH---------HHcCCCCCCC---------------CCC
Confidence            456789999999999999999 999986321     1111110         0000000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+.+++.+||..+|.+||+++++...|+.
T Consensus       229 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         229 PEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            4568889999999999999999999998875


No 77 
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.39  E-value=3.6e-13  Score=90.09  Aligned_cols=81  Identities=25%  Similarity=0.341  Sum_probs=54.5

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |..||....     .......         +........               ....
T Consensus       178 ~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-----~~~~~~~---------~~~~~~~~~---------------~~~~  228 (260)
T cd05070         178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMN-----NREVLEQ---------VERGYRMPC---------------PQDC  228 (260)
T ss_pred             CCCcchhhhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHH---------HHcCCCCCC---------------CCcC
Confidence            456789999999999999999 888885321     1111110         000000000               0133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+.+++.+||..+|++||++.++...|+.
T Consensus       229 ~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         229 PISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             CHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            4568899999999999999999999988864


No 78 
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.39  E-value=4.7e-13  Score=89.80  Aligned_cols=82  Identities=28%  Similarity=0.355  Sum_probs=55.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |..||.....     ......         +.......               .....
T Consensus       178 ~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~-----~~~~~~---------~~~~~~~~---------------~~~~~  228 (262)
T cd05071         178 GRFTIKSDVWSFGILLTELTTKGRVPYPGMVN-----REVLDQ---------VERGYRMP---------------CPPEC  228 (262)
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh-----HHHHHH---------HhcCCCCC---------------Ccccc
Confidence            457889999999999999999 7778753210     000000         00000000               01144


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++.+||+.+|.+||++.+++..|+..
T Consensus       229 ~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         229 PESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             CHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            56788999999999999999999999998764


No 79 
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.39  E-value=4.4e-13  Score=92.36  Aligned_cols=84  Identities=23%  Similarity=0.274  Sum_probs=57.3

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHH-H
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTE-E   80 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   80 (122)
                      |+.|+.++||||||+.++|+.+|+-||...........            ++++......            ++..+. .
T Consensus       251 g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~------------~Ll~~Iv~~p------------pP~lP~~~  306 (364)
T KOG0581|consen  251 GESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIF------------ELLCAIVDEP------------PPRLPEGE  306 (364)
T ss_pred             CCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHH------------HHHHHHhcCC------------CCCCCccc
Confidence            56899999999999999999999999874311111111            1111111111            111112 3


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ++.++..++..|++.+|.+||+..+++.+
T Consensus       307 fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H  335 (364)
T KOG0581|consen  307 FSPEFRSFVSCCLRKDPSERPSAKQLLQH  335 (364)
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            67788999999999999999999998753


No 80 
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.38  E-value=2.5e-13  Score=90.71  Aligned_cols=79  Identities=22%  Similarity=0.288  Sum_probs=53.3

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||+++||+++ |..||....  .   .+....     .......    ..+               ...
T Consensus       176 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~---~~~~~~-----~~~~~~~----~~~---------------~~~  226 (256)
T cd05059         176 SRFSSKSDVWSFGVLMWEVFSEGKMPYERFS--N---SEVVES-----VSAGYRL----YRP---------------KLA  226 (256)
T ss_pred             CCCCchhhHHHHHHHHHHHhccCCCCCCCCC--H---HHHHHH-----HHcCCcC----CCC---------------CCC
Confidence            457789999999999999999 788886321  1   111110     0000000    000               134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      +..+.+++.+||..+|.+||++.++++.|
T Consensus       227 ~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         227 PTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            55788999999999999999999999876


No 81 
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.38  E-value=6.9e-13  Score=89.15  Aligned_cols=81  Identities=15%  Similarity=0.239  Sum_probs=54.8

Q ss_pred             CCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .++.++||||||+++||+++ |+.||....  ...+......   .     ....    .+               ...+
T Consensus       191 ~~~~~sDi~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~---~-----~~~~----~~---------------~~~~  241 (273)
T cd05074         191 VYTTHSDVWAFGVTMWEIMTRGQTPYAGVE--NSEIYNYLIK---G-----NRLK----QP---------------PDCL  241 (273)
T ss_pred             ccchhhhhHHHHHHHHHHhhCCCCCCCCCC--HHHHHHHHHc---C-----CcCC----CC---------------CCCC
Confidence            46788999999999999999 778875321  1111111100   0     0000    00               0334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      ..+.+++.+||..+|++||++.+++..|+.+
T Consensus       242 ~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         242 EDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            5778999999999999999999999999875


No 82 
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.38  E-value=6.7e-13  Score=89.12  Aligned_cols=81  Identities=19%  Similarity=0.244  Sum_probs=53.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      +.++.++||||||+++||+++|+.||...     ..............    .+.                   .....+
T Consensus       188 ~~~~~~~Dv~slG~ll~~l~~g~~p~~~~-----~~~~~~~~~~~~~~----~~~-------------------~~~~~~  239 (269)
T cd08528         188 EPYGEKADVWAFGCILYQMCTLQPPFYST-----NMLSLATKIVEAVY----EPL-------------------PEGMYS  239 (269)
T ss_pred             CCCchHHHHHHHHHHHHHHHhCCCccccc-----CHHHHHHHHhhccC----CcC-------------------CcccCC
Confidence            45788999999999999999999998531     11111100000000    000                   000234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      ..+.+++.+||+.+|++||++.++..++.
T Consensus       240 ~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         240 EDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            56788999999999999999999998875


No 83 
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.38  E-value=4e-13  Score=89.30  Aligned_cols=80  Identities=24%  Similarity=0.344  Sum_probs=54.1

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ +..||.....     ...         ...+........+               ...
T Consensus       170 ~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-----~~~---------~~~~~~~~~~~~~---------------~~~  220 (251)
T cd05041         170 GRYTSESDVWSYGILLWETFSLGDTPYPGMSN-----QQT---------RERIESGYRMPAP---------------QLC  220 (251)
T ss_pred             CCCCcchhHHHHHHHHHHHHhccCCCCccCCH-----HHH---------HHHHhcCCCCCCC---------------ccC
Confidence            567889999999999999999 7778753211     010         0001000000000               134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++.+||..+|.+||++.++++.|.
T Consensus       221 ~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         221 PEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            557888999999999999999999999875


No 84 
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.38  E-value=3.4e-13  Score=92.31  Aligned_cols=85  Identities=14%  Similarity=0.233  Sum_probs=56.6

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||+++||+++ |..||....  ......++.            ........               ..+
T Consensus       186 ~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~~~~------------~~~~~~~~---------------~~~  236 (303)
T cd05110         186 RKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLLE------------KGERLPQP---------------PIC  236 (303)
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH------------CCCCCCCC---------------CCC
Confidence            456788999999999999997 888885321  011111110            00000000               023


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      +..+..++..||..+|++||++.+++..|+.+...
T Consensus       237 ~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         237 TIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            34678889999999999999999999999987543


No 85 
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.38  E-value=5.7e-13  Score=89.95  Aligned_cols=80  Identities=16%  Similarity=0.323  Sum_probs=53.6

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++|||||||+++|+++ +..||....     ........        ....... .+               ..+
T Consensus       196 ~~~~~~~Di~slG~~l~el~~~~~~p~~~~~-----~~~~~~~~--------~~~~~~~-~~---------------~~~  246 (277)
T cd05062         196 GVFTTYSDVWSFGVVLWEIATLAEQPYQGMS-----NEQVLRFV--------MEGGLLD-KP---------------DNC  246 (277)
T ss_pred             CCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH--------HcCCcCC-CC---------------CCC
Confidence            457889999999999999999 677875321     11111100        0000000 00               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++.+||+.+|.+||++.+++..|+
T Consensus       247 ~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         247 PDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            456788999999999999999999998876


No 86 
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=99.37  E-value=3.6e-13  Score=89.84  Aligned_cols=82  Identities=27%  Similarity=0.374  Sum_probs=55.2

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |..||....     ......         .+......               ......
T Consensus       174 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~---------~~~~~~~~---------------~~~~~~  224 (256)
T cd05039         174 KKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVP---------HVEKGYRM---------------EAPEGC  224 (256)
T ss_pred             CcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC-----HHHHHH---------HHhcCCCC---------------CCccCC
Confidence            456788999999999999997 888885321     111100         00000000               000134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++.+||..+|.+||++.+++..|+.+
T Consensus       225 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         225 PPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            56778899999999999999999999998754


No 87 
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.37  E-value=3.4e-13  Score=89.88  Aligned_cols=79  Identities=23%  Similarity=0.358  Sum_probs=52.9

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||+++||+++ |..||....     ...........  .....+                      ...
T Consensus       176 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~--~~~~~~----------------------~~~  226 (256)
T cd05112         176 SKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-----NSEVVETINAG--FRLYKP----------------------RLA  226 (256)
T ss_pred             CCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-----HHHHHHHHhCC--CCCCCC----------------------CCC
Confidence            457788999999999999998 888885321     11111110000  000000                      022


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      +..+.+++.+||+.+|++||++.++++.|
T Consensus       227 ~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         227 SQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            45678899999999999999999999876


No 88 
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.37  E-value=3.6e-13  Score=89.44  Aligned_cols=80  Identities=23%  Similarity=0.316  Sum_probs=53.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |..||....     .......     .    ........+               ...
T Consensus       169 ~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~-----~~~~~~~-----~----~~~~~~~~~---------------~~~  219 (250)
T cd05085         169 GRYSSESDVWSYGILLWETFSLGVCPYPGMT-----NQQAREQ-----V----EKGYRMSCP---------------QKC  219 (250)
T ss_pred             CCCCchhHHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHH-----H----HcCCCCCCC---------------CCC
Confidence            457789999999999999998 888885321     1111100     0    000000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++.+||..+|.+||++.++.+.|.
T Consensus       220 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         220 PDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            457788999999999999999999998875


No 89 
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.37  E-value=1.3e-12  Score=90.53  Aligned_cols=86  Identities=22%  Similarity=0.321  Sum_probs=58.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++||++ |..||...     .............         ....+               ..+
T Consensus       211 ~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~~~~~~~---------~~~~~---------------~~~  261 (334)
T cd05100         211 RVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-----PVEELFKLLKEGH---------RMDKP---------------ANC  261 (334)
T ss_pred             CCcCchhhhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHcCC---------CCCCC---------------CCC
Confidence            457789999999999999998 77887531     1111111110000         00000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESF  117 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~  117 (122)
                      +..+..++..||+.+|.+||++.+++..|.++....
T Consensus       262 ~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~  297 (334)
T cd05100         262 THELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT  297 (334)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence            456788999999999999999999999999887543


No 90 
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.37  E-value=3.9e-13  Score=97.74  Aligned_cols=90  Identities=18%  Similarity=0.256  Sum_probs=60.0

Q ss_pred             CCCCCCCccchhhhHHHHHHHh--cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFI--RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      -++|+++||||+||+++||+++  ...||.....+     +.+     ++..++++..-+.            -.+..+.
T Consensus       713 lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e-----~vv-----en~~~~~~~~~~~------------~~l~~P~  770 (807)
T KOG1094|consen  713 LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE-----QVV-----ENAGEFFRDQGRQ------------VVLSRPP  770 (807)
T ss_pred             hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH-----HHH-----HhhhhhcCCCCcc------------eeccCCC
Confidence            3789999999999999999987  56677532211     111     1111222211111            1111122


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      -|+..++++|+.||..+..+||+|++++..|+..
T Consensus       771 ~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  771 ACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             cCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            6788899999999999999999999999888753


No 91 
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.37  E-value=5.7e-13  Score=89.19  Aligned_cols=81  Identities=23%  Similarity=0.295  Sum_probs=54.6

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |..||....  .........        .....    ..+               ...
T Consensus       178 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~--------~~~~~----~~~---------------~~~  228 (260)
T cd05069         178 GRFTIKSDVWSFGILLTELVTKGRVPYPGMV--NREVLEQVE--------RGYRM----PCP---------------QGC  228 (260)
T ss_pred             CCcChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH--------cCCCC----CCC---------------ccc
Confidence            456789999999999999999 888886321  000101000        00000    000               134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+.+++.+||..+|.+||++.++++.|+.
T Consensus       229 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         229 PESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            4567889999999999999999999998875


No 92 
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.36  E-value=5.7e-13  Score=91.28  Aligned_cols=83  Identities=20%  Similarity=0.315  Sum_probs=55.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++|||||||+++|+++ |..||..... ...+..            .+........+               ...
T Consensus       218 ~~~~~~~DiwslGvil~el~t~g~~p~~~~~~-~~~~~~------------~~~~~~~~~~~---------------~~~  269 (302)
T cd05055         218 CVYTFESDVWSYGILLWEIFSLGSNPYPGMPV-DSKFYK------------LIKEGYRMAQP---------------EHA  269 (302)
T ss_pred             CCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-hHHHHH------------HHHcCCcCCCC---------------CCC
Confidence            456788999999999999998 8888853211 000001            11100000000               022


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++.+||..+|.+||++.+++..|+++
T Consensus       270 ~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         270 PAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            35678899999999999999999999999874


No 93 
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.36  E-value=4.6e-13  Score=89.30  Aligned_cols=81  Identities=28%  Similarity=0.394  Sum_probs=54.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |+.||....     .......         +........               ....
T Consensus       172 ~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~---------~~~~~~~~~---------------~~~~  222 (254)
T cd05083         172 KKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-----LKEVKEC---------VEKGYRMEP---------------PEGC  222 (254)
T ss_pred             CCcCchhhHHHHHHHHHHHHhCCCCCCccCC-----HHHHHHH---------HhCCCCCCC---------------CCcC
Confidence            567889999999999999998 888886321     1111110         000000000               0134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+.+++..||+.+|++||++.+++..|++
T Consensus       223 ~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         223 PADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            4567889999999999999999999988763


No 94 
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.36  E-value=1.1e-12  Score=91.38  Aligned_cols=86  Identities=21%  Similarity=0.269  Sum_probs=57.3

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |..||...... ..+...+.   .+     ..    ...+               ...
T Consensus       256 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~---~~-----~~----~~~~---------------~~~  307 (343)
T cd05103         256 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLK---EG-----TR----MRAP---------------DYT  307 (343)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-HHHHHHHh---cc-----CC----CCCC---------------CCC
Confidence            457889999999999999997 88888632111 00000000   00     00    0000               012


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      ...+.+++..||+.+|.+||++.++++.|+.+.+.
T Consensus       308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~  342 (343)
T cd05103         308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  342 (343)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            34578899999999999999999999999988763


No 95 
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.36  E-value=1e-12  Score=88.38  Aligned_cols=82  Identities=17%  Similarity=0.286  Sum_probs=50.3

Q ss_pred             CCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      ++.++||||||++++|+++ |+.||......  ......   ..........+.+.                   .....
T Consensus       186 ~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~~~~~---~~~~~~~~~~~~~~-------------------~~~~~  241 (269)
T cd05087         186 QTKESNVWSLGVTIWELFELGSQPYRHLSDE--QVLTYT---VREQQLKLPKPRLK-------------------LPLSD  241 (269)
T ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCChH--HHHHHH---hhcccCCCCCCccC-------------------CCCCh
Confidence            5789999999999999996 99898642211  110100   00000000111100                   02234


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      .+.+++..|| .+|++||++.+|++.|.
T Consensus       242 ~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         242 RWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             HHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            5677888999 58999999999998774


No 96 
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.36  E-value=1.8e-12  Score=87.18  Aligned_cols=85  Identities=15%  Similarity=0.239  Sum_probs=57.7

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |..||.....  ........   .+     ....    .+               ..+
T Consensus       183 ~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~~---~~-----~~~~----~~---------------~~~  233 (270)
T cd05056         183 RRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--NDVIGRIE---NG-----ERLP----MP---------------PNC  233 (270)
T ss_pred             CCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHH---cC-----CcCC----CC---------------CCC
Confidence            357788999999999999986 9999863211  11101000   00     0000    00               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      +..+.+++.+||..+|++||++.+++..|..+...
T Consensus       234 ~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         234 PPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            45678899999999999999999999999987653


No 97 
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.35  E-value=3.6e-13  Score=91.11  Aligned_cols=98  Identities=20%  Similarity=0.270  Sum_probs=55.9

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|++++..++.....      .+................+......  .     .........+
T Consensus       186 ~~~~~~~Di~slG~~l~el~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~  252 (284)
T cd05081         186 SKFSVASDVWSFGVVLYELFTYSDKSCSPPA------EFMRMMGNDKQGQMIVYHLIELLKN--N-----GRLPAPPGCP  252 (284)
T ss_pred             CCcChHHHHHHHHHHHHHHhhcCCcCCCcch------hhhhhcccccccccchHHHHHHHhc--C-----CcCCCCCCCC
Confidence            4577899999999999999998776532110      0110000000000000000000000  0     0000011344


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      ..+.+++.+||..+|++|||+.+++..|+.+
T Consensus       253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         253 AEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            5788999999999999999999999999875


No 98 
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.35  E-value=1.7e-12  Score=86.36  Aligned_cols=78  Identities=15%  Similarity=0.202  Sum_probs=52.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|+.||....     -......        .... ....               .....+
T Consensus       176 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~--------~~~~-~~~~---------------~~~~~~  226 (256)
T cd08529         176 KPYNEKSDVWALGVVLYECCTGKHPFDANN-----QGALILK--------IIRG-VFPP---------------VSQMYS  226 (256)
T ss_pred             CCCCCccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHH--------HHcC-CCCC---------------CccccC
Confidence            346789999999999999999999986321     0111100        0000 0000               001334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++.+||+.+|++||++.+++..
T Consensus       227 ~~~~~~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         227 QQLAQLIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHhhC
Confidence            567889999999999999999998753


No 99 
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.35  E-value=7.5e-13  Score=94.32  Aligned_cols=84  Identities=21%  Similarity=0.222  Sum_probs=56.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |..||.......    ..         ...+........+               ..+
T Consensus       316 ~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~----~~---------~~~~~~~~~~~~p---------------~~~  367 (401)
T cd05107         316 NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE----QF---------YNAIKRGYRMAKP---------------AHA  367 (401)
T ss_pred             CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH----HH---------HHHHHcCCCCCCC---------------CCC
Confidence            346788999999999999998 788875321100    00         0000000000000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      +..+.+++..||+.+|.+||++.+|+..|+.+.
T Consensus       368 ~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         368 SDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            457789999999999999999999999998874


No 100
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.35  E-value=9.3e-13  Score=88.97  Aligned_cols=84  Identities=13%  Similarity=0.230  Sum_probs=56.9

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |+.||....     ..++...         +........+               ..+
T Consensus       186 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~---------~~~~~~~~~~---------------~~~  236 (279)
T cd05057         186 RIYTHKSDVWSYGVTVWELMTFGAKPYEGIP-----AVEIPDL---------LEKGERLPQP---------------PIC  236 (279)
T ss_pred             CCcCchhhHHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHH---------HhCCCCCCCC---------------CCC
Confidence            457789999999999999998 999986321     1111110         0000000000               023


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      ...+..++..||..+|++||++.+++..|..+..
T Consensus       237 ~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         237 TIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            3456788999999999999999999999998754


No 101
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.35  E-value=4.1e-13  Score=89.47  Aligned_cols=78  Identities=12%  Similarity=0.178  Sum_probs=52.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|+.||...     .....+.....+            ..+            .......
T Consensus       176 ~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~~------------~~~------------~~~~~~~  226 (256)
T cd08218         176 RPYNNKSDIWALGCVLYEMCTLKHAFEAG-----NMKNLVLKIIRG------------SYP------------PVSSHYS  226 (256)
T ss_pred             CCCCCccchhHHHHHHHHHHcCCCCccCC-----CHHHHHHHHhcC------------CCC------------CCcccCC
Confidence            45778999999999999999999998631     111111110000            000            0001334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++..||+.+|++||++.+|+..
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~vl~~  253 (256)
T cd08218         227 YDLRNLVSQLFKRNPRDRPSVNSILEK  253 (256)
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence            567889999999999999999999863


No 102
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.34  E-value=1.4e-12  Score=88.07  Aligned_cols=78  Identities=15%  Similarity=0.197  Sum_probs=53.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|..||......     ..         .......               .++......+
T Consensus       176 ~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~---------~~~~~~~---------------~~~~~~~~~~  226 (277)
T cd06640         176 SAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RV---------LFLIPKN---------------NPPTLTGEFS  226 (277)
T ss_pred             CCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hH---------hhhhhcC---------------CCCCCchhhh
Confidence            45788999999999999999999998632110     00         0000000               0001112455


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++..||..+|.+||++.+++..
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         227 KPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            678899999999999999999999755


No 103
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.34  E-value=5e-13  Score=90.54  Aligned_cols=96  Identities=14%  Similarity=0.234  Sum_probs=55.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc-hhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE-KIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++++.|......   .+.......... .....+. .+..     +. .     ......+
T Consensus       187 ~~~~~~~Di~slG~il~ellt~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~-----~~-~-----~~~~~~~  251 (284)
T cd05079         187 SKFYIASDVWSFGVTLYELLTYCDSESSPMT---LFLKMIGPTHGQMTVTRLVR-VLEE-----GK-R-----LPRPPNC  251 (284)
T ss_pred             CCCCccccchhhhhhhhhhhcCCCCCccccc---hhhhhcccccccccHHHHHH-HHHc-----Cc-c-----CCCCCCC
Confidence            4577899999999999999998776432110   000000000000 0000000 0000     00 0     0000134


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++..||+.+|.+||++.+++..|+.+
T Consensus       252 ~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         252 PEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             CHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            56788999999999999999999999999876


No 104
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.34  E-value=1.3e-12  Score=87.80  Aligned_cols=78  Identities=14%  Similarity=0.168  Sum_probs=50.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++||+++|+.||....    .......      ..........                  ....+
T Consensus       191 ~~~~~~~Dv~slGv~l~el~~g~~p~~~~~----~~~~~~~------~~~~~~~~~~------------------~~~~~  242 (272)
T cd06637         191 ATYDFKSDLWSLGITAIEMAEGAPPLCDMH----PMRALFL------IPRNPAPRLK------------------SKKWS  242 (272)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCccccC----HHHHHHH------HhcCCCCCCC------------------CCCcC
Confidence            357789999999999999999999985321    1111000      0000000000                  00234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++.+||..+|.+||++.++++
T Consensus       243 ~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         243 KKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            56788999999999999999999875


No 105
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=99.34  E-value=1.4e-12  Score=88.89  Aligned_cols=87  Identities=20%  Similarity=0.267  Sum_probs=52.9

Q ss_pred             CCCCCCccchhhhHHHHHHHh--cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI--RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      +.++.++|||||||+++|+++  +..||....  .........        +...........            .....
T Consensus       206 ~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~--~~~~~~~~~--------~~~~~~~~~~~~------------~~~~~  263 (295)
T cd05097         206 GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS--DEQVIENTG--------EFFRNQGRQIYL------------SQTPL  263 (295)
T ss_pred             CCcCchhhHHHHHHHHHHHHHcCCCCCCcccC--hHHHHHHHH--------HhhhhccccccC------------CCCCC
Confidence            457889999999999999998  455664211  111111100        000000000000            00002


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      .+..+.+++.+||+.+|++||++.+|+..|+
T Consensus       264 ~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         264 CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             CCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            3457899999999999999999999998875


No 106
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.34  E-value=1.1e-12  Score=88.51  Aligned_cols=78  Identities=15%  Similarity=0.222  Sum_probs=51.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|+.|+.......  ....        ......+.+                   ....+
T Consensus       176 ~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~--------~~~~~~~~~-------------------~~~~~  226 (277)
T cd06642         176 SAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFL--------IPKNSPPTL-------------------EGQYS  226 (277)
T ss_pred             CCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhh--------hhcCCCCCC-------------------CcccC
Confidence            356789999999999999999999985321100  0000        000000000                   01334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++.+||+.+|++||++.+++.+
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06642         227 KPFKEFVEACLNKDPRFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            567889999999999999999999863


No 107
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.34  E-value=1.3e-12  Score=87.52  Aligned_cols=81  Identities=23%  Similarity=0.354  Sum_probs=54.3

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++||||||++++|+++ |..||....  ...+.....            .....               ......
T Consensus       178 ~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~------------~~~~~---------------~~~~~~  228 (260)
T cd05073         178 GSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALE------------RGYRM---------------PRPENC  228 (260)
T ss_pred             CCcCccccchHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHh------------CCCCC---------------CCcccC
Confidence            456789999999999999999 888886321  111111100            00000               000133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+.+++.+||+.+|++||++.++...|+.
T Consensus       229 ~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         229 PEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             CHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            4567889999999999999999999998875


No 108
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.34  E-value=3.7e-12  Score=86.47  Aligned_cols=88  Identities=20%  Similarity=0.171  Sum_probs=53.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||+|+++||+++|+.||...........+..............+.      .            ......+
T Consensus       178 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~------------~~~~~~~  239 (287)
T cd06621         178 KPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDE------P------------GNGIKWS  239 (287)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccC------C------------CCCCchH
Confidence            467889999999999999999999987432111111111111000000000000      0            0000234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++..||..+|.+||++.+++.
T Consensus       240 ~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         240 EEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            56789999999999999999999986


No 109
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.33  E-value=2.4e-12  Score=85.82  Aligned_cols=81  Identities=23%  Similarity=0.313  Sum_probs=54.0

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++||++ |..||...     ...+.......      .....  ..               ....
T Consensus       175 ~~~~~~~Di~slG~~l~el~t~g~~p~~~~-----~~~~~~~~~~~------~~~~~--~~---------------~~~~  226 (257)
T cd05040         175 RTFSHASDVWMFGVTLWEMFTYGEEPWAGL-----SGSQILKKIDK------EGERL--ER---------------PEAC  226 (257)
T ss_pred             cCcCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHh------cCCcC--CC---------------CccC
Confidence            457789999999999999998 99998522     11111111000      00000  00               0133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++..||+.+|.+||++.+++..|.
T Consensus       227 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         227 PQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             CHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            456788999999999999999999998875


No 110
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.33  E-value=1.7e-12  Score=88.26  Aligned_cols=87  Identities=20%  Similarity=0.296  Sum_probs=53.4

Q ss_pred             CCCCCCccchhhhHHHHHHHh--cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI--RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      +.++.++|||||||+++|+++  +..||....  ...............     ........               ...
T Consensus       207 ~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~---------------~~~  264 (296)
T cd05051         207 GKFTTKSDVWAFGVTLWEILTLCREQPYEHLT--DQQVIENAGHFFRDD-----GRQIYLPR---------------PPN  264 (296)
T ss_pred             CCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--hHHHHHHHHhccccc-----cccccCCC---------------ccC
Confidence            467889999999999999998  556664221  111111111000000     00000000               013


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      .+..+.+++..||+.+|.+||++.+|+..|+
T Consensus       265 ~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         265 CPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             CCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            3457899999999999999999999998875


No 111
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.33  E-value=1.6e-12  Score=90.82  Aligned_cols=78  Identities=15%  Similarity=0.233  Sum_probs=50.3

Q ss_pred             CCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHHH
Q 036557            6 SMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNAI   85 (122)
Q Consensus         6 s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (122)
                      +.++|||||||++||+++|+.||....  ..............     ..+                   .........+
T Consensus       251 ~~~~DvwslGvil~el~~g~~pf~~~~--~~~~~~~~~~~~~~-----~~~-------------------~~~~~~~~~l  304 (353)
T PLN00034        251 GYAGDIWSLGVSILEFYLGRFPFGVGR--QGDWASLMCAICMS-----QPP-------------------EAPATASREF  304 (353)
T ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCCC--CccHHHHHHHHhcc-----CCC-------------------CCCCccCHHH
Confidence            458999999999999999999986221  11111111000000     000                   0001334567


Q ss_pred             HHHhhhcCCCCcCCCCChHHHHHH
Q 036557           86 IKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        86 ~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+++..||+.+|.+||++.+++..
T Consensus       305 ~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        305 RHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcC
Confidence            889999999999999999999864


No 112
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.33  E-value=1.2e-12  Score=87.86  Aligned_cols=82  Identities=21%  Similarity=0.242  Sum_probs=55.5

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |..||.....  ......+.        +....    ...               ...
T Consensus       184 ~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--~~~~~~~~--------~~~~~----~~~---------------~~~  234 (267)
T cd05066         184 RKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--QDVIKAIE--------EGYRL----PAP---------------MDC  234 (267)
T ss_pred             CccCchhhhHHHHHHHHHHhcCCCCCcccCCH--HHHHHHHh--------CCCcC----CCC---------------CCC
Confidence            457889999999999999886 9999853211  01111110        00000    000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +..+.+++.+||+.+|.+||++.++++.|.++
T Consensus       235 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         235 PAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             CHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            45678899999999999999999999998875


No 113
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.33  E-value=3e-12  Score=85.64  Aligned_cols=84  Identities=19%  Similarity=0.299  Sum_probs=53.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++++++|..||....................     ..+.+.                  .....
T Consensus       174 ~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-----~~~~~~------------------~~~~~  230 (265)
T cd06605         174 NDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-----PPPRLP------------------SGKFS  230 (265)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-----CCCCCC------------------hhhcC
Confidence            4578899999999999999999999864321111121211111000     000000                  00145


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++..||..+|.+||++.+++..
T Consensus       231 ~~~~~li~~~l~~~p~~Rpt~~~ll~~  257 (265)
T cd06605         231 PDFQDFVNLCLIKDPRERPSYKELLEH  257 (265)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence            567889999999999999999998753


No 114
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.32  E-value=1.7e-12  Score=87.99  Aligned_cols=82  Identities=16%  Similarity=0.191  Sum_probs=53.1

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++|||||||++||+++|+.||....    ...+.+......     ..+.+....               ....+.
T Consensus       186 ~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~-----~~~~~~~~~---------------~~~~~~  241 (288)
T cd06616         186 GYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKG-----DPPILSNSE---------------EREFSP  241 (288)
T ss_pred             CCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCC-----CCCcCCCcC---------------CCccCH
Confidence            57889999999999999999999986321    111111111000     000100000               013455


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+.+++..||+.+|++||++.+|+..
T Consensus       242 ~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         242 SFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcC
Confidence            77899999999999999999998754


No 115
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.32  E-value=1.2e-12  Score=87.94  Aligned_cols=77  Identities=18%  Similarity=0.308  Sum_probs=50.3

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||++||+++ |..|+....     ..+...         ........ ..                ..
T Consensus       184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----~~~~~~---------~~~~~~~~-~~----------------~~  232 (262)
T cd05077         184 KNLSIAADKWSFGTTLWEICYNGEIPLKDKT-----LAEKER---------FYEGQCML-VT----------------PS  232 (262)
T ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCcc-----hhHHHH---------HHhcCccC-CC----------------CC
Confidence            457889999999999999974 777765211     100000         00000000 00                12


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      ...+.+++..||+.+|.+||++.+++..+
T Consensus       233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         233 CKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            34678899999999999999999998876


No 116
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.32  E-value=3.1e-12  Score=86.13  Aligned_cols=83  Identities=18%  Similarity=0.287  Sum_probs=49.7

Q ss_pred             CCCCCccchhhhHHHHHHHhc-ccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIR-RRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .++.++||||||+++||++++ ..||....     ..........+......++.+..                   ...
T Consensus       184 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~  239 (268)
T cd05086         184 EQTKPSNVWALGVTLWELFENAAQPYSHLS-----DREVLNHVIKDQQVKLFKPQLEL-------------------PYS  239 (268)
T ss_pred             CCCCcchhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHhhcccccCCCccCC-------------------CCc
Confidence            356789999999999999974 56764211     11111111111111112211111                   123


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      ..+.+++..|| .+|++||++.+|++.|.
T Consensus       240 ~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         240 ERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence            45677888999 67999999999988764


No 117
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.32  E-value=1.3e-12  Score=88.00  Aligned_cols=78  Identities=19%  Similarity=0.232  Sum_probs=51.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||+++||+++|+.||....  .   ......     ......+.+..                  ...+
T Consensus       173 ~~~~~~sDv~slG~il~~l~tg~~p~~~~~--~---~~~~~~-----~~~~~~~~~~~------------------~~~~  224 (274)
T cd06609         173 SGYDEKADIWSLGITAIELAKGEPPLSDLH--P---MRVLFL-----IPKNNPPSLEG------------------NKFS  224 (274)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCcccCc--h---HHHHHH-----hhhcCCCCCcc------------------cccC
Confidence            357889999999999999999999986321  0   000000     00000100000                  0134


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++.+||..+|++||++++++.
T Consensus       225 ~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         225 KPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            56788999999999999999999975


No 118
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.32  E-value=1.7e-12  Score=86.39  Aligned_cols=78  Identities=15%  Similarity=0.218  Sum_probs=52.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|..||...     .....+.......    ..+    ..                ...+
T Consensus       177 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~-----~~~~~~~~~~~~~----~~~----~~----------------~~~~  227 (257)
T cd08225         177 RPYNNKTDIWSLGCVLYELCTLKHPFEGN-----NLHQLVLKICQGY----FAP----IS----------------PNFS  227 (257)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHhccc----CCC----CC----------------CCCC
Confidence            35778999999999999999999998521     1122221111110    000    00                0233


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++.+||..+|++||++.++++.
T Consensus       228 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~  254 (257)
T cd08225         228 RDLRSLISQLFKVSPRDRPSITSILKR  254 (257)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHhhC
Confidence            467888999999999999999998753


No 119
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.32  E-value=1.9e-12  Score=86.08  Aligned_cols=79  Identities=19%  Similarity=0.201  Sum_probs=51.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++||++|+.||.......    .. ..     ..........                 ......
T Consensus       174 ~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~----~~-~~-----~~~~~~~~~~-----------------~~~~~~  226 (256)
T cd06612         174 IGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR----AI-FM-----IPNKPPPTLS-----------------DPEKWS  226 (256)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh----hh-hh-----hccCCCCCCC-----------------chhhcC
Confidence            457789999999999999999999986321100    00 00     0000000000                 001334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++..||+.+|++||++.+++.
T Consensus       227 ~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         227 PEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            56788999999999999999999875


No 120
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.31  E-value=1.5e-12  Score=87.03  Aligned_cols=81  Identities=23%  Similarity=0.299  Sum_probs=54.3

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |+.||....     .......     ......    ...+               ...
T Consensus       179 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-----~~~~~~~-----~~~~~~----~~~~---------------~~~  229 (261)
T cd05034         179 GRFTIKSDVWSFGILLTEIVTYGRVPYPGMT-----NREVLEQ-----VERGYR----MPRP---------------PNC  229 (261)
T ss_pred             CCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHH-----HHcCCC----CCCC---------------CCC
Confidence            457789999999999999998 898885321     0111100     000000    0000               123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      +..+.+++.+||..+|.+||++.++...|+.
T Consensus       230 ~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         230 PEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             CHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            4567889999999999999999999988864


No 121
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.31  E-value=2.1e-12  Score=87.35  Aligned_cols=78  Identities=15%  Similarity=0.185  Sum_probs=51.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++||+++|..||.....    .....      .......+...                  ....+
T Consensus       201 ~~~~~~~DvwslG~~l~el~~g~~p~~~~~~----~~~~~------~~~~~~~~~~~------------------~~~~~  252 (282)
T cd06636         201 ATYDYRSDIWSLGITAIEMAEGAPPLCDMHP----MRALF------LIPRNPPPKLK------------------SKKWS  252 (282)
T ss_pred             cCCCcccchhHHHHHHHHHHhCCCCccccCH----Hhhhh------hHhhCCCCCCc------------------ccccC
Confidence            3577899999999999999999999863210    00000      00000000000                  01344


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++..||..+|.+||++.+++.
T Consensus       253 ~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         253 KKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             HHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            57889999999999999999998864


No 122
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.31  E-value=2.4e-12  Score=85.98  Aligned_cols=78  Identities=14%  Similarity=0.107  Sum_probs=51.1

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||+++||+++|+.||...    .........         .........               ......
T Consensus       183 ~~~~~~Di~slG~il~el~~g~~p~~~~----~~~~~~~~~---------~~~~~~~~~---------------~~~~~~  234 (263)
T cd06625         183 GYGRKADVWSVGCTVVEMLTEKPPWAEF----EAMAAIFKI---------ATQPTNPQL---------------PSHVSP  234 (263)
T ss_pred             CCCchhhhHHHHHHHHHHHhCCCCcccc----chHHHHHHH---------hccCCCCCC---------------CccCCH
Confidence            4678999999999999999999998632    111111000         000000000               013345


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+.+++..||..+|.+||++.+++..
T Consensus       235 ~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         235 DARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            67889999999999999999998764


No 123
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.31  E-value=2.3e-12  Score=87.16  Aligned_cols=80  Identities=19%  Similarity=0.142  Sum_probs=51.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++||+++|+.||....    ....... ..     ....+...  .+               ....
T Consensus       204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~----~~~~~~~-~~-----~~~~~~~~--~~---------------~~~~  256 (286)
T cd06638         204 STYDARCDVWSLGITAIELGDGDPPLADLH----PMRALFK-IP-----RNPPPTLH--QP---------------ELWS  256 (286)
T ss_pred             ccccchhhhhhHHHHHHHHhcCCCCCCCCc----hhHHHhh-cc-----ccCCCccc--CC---------------CCcC
Confidence            347889999999999999999999986321    1111000 00     00000000  00               0223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+..++.+||+.+|++||++.++++.
T Consensus       257 ~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         257 NEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            467889999999999999999999865


No 124
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.30  E-value=4e-12  Score=87.15  Aligned_cols=79  Identities=16%  Similarity=0.165  Sum_probs=52.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      +.++.++||||||+++||+++|..||....     .......     ......+...                  ....+
T Consensus       189 ~~~~~~sDv~s~G~il~el~tg~~p~~~~~-----~~~~~~~-----~~~~~~~~~~------------------~~~~~  240 (307)
T cd06607         189 GQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYH-----IAQNDSPTLS------------------SNDWS  240 (307)
T ss_pred             CCCCcccchHHHHHHHHHHHcCCCCCCCcc-----HHHHHHH-----HhcCCCCCCC------------------chhhC
Confidence            457789999999999999999999985311     1110000     0000000000                  01345


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++..||..+|++||++.+++..
T Consensus       241 ~~~~~li~~~l~~~p~~Rp~~~~il~~  267 (307)
T cd06607         241 DYFRNFVDSCLQKIPQDRPSSEELLKH  267 (307)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            568899999999999999999999763


No 125
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.30  E-value=1.9e-12  Score=86.02  Aligned_cols=80  Identities=24%  Similarity=0.344  Sum_probs=53.9

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||+|++++|+++ |..||....     ........        .. .....               .....
T Consensus       182 ~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~--------~~-~~~~~---------------~~~~~  232 (262)
T cd00192         182 GIFTSKSDVWSFGVLLWEIFTLGATPYPGLS-----NEEVLEYL--------RK-GYRLP---------------KPEYC  232 (262)
T ss_pred             CCcchhhccHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHH--------Hc-CCCCC---------------CCccC
Confidence            357889999999999999999 588886431     11111110        00 00000               01133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++..||..+|.+||++.+++..|+
T Consensus       233 ~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         233 PDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             ChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            567889999999999999999999998763


No 126
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=99.30  E-value=1e-12  Score=87.93  Aligned_cols=77  Identities=21%  Similarity=0.265  Sum_probs=49.8

Q ss_pred             CCCCCccchhhhHHHHHHHhcc-cCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRR-RPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .++.++||||||+++||+++|. .|+....     .....         ......  ...+               ....
T Consensus       181 ~~~~~~DiwslG~~l~~l~~g~~~~~~~~~-----~~~~~---------~~~~~~--~~~~---------------~~~~  229 (258)
T cd05078         181 NLSLAADKWSFGTTLWEIFSGGDKPLSALD-----SQKKL---------QFYEDR--HQLP---------------APKW  229 (258)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCChhhcc-----HHHHH---------HHHHcc--ccCC---------------CCCc
Confidence            4678899999999999999985 4443211     00000         000000  0000               0223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      ..+.+++..||+.+|++||++.++++.|+
T Consensus       230 ~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         230 TELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            46788999999999999999999998763


No 127
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.30  E-value=2.5e-12  Score=93.83  Aligned_cols=78  Identities=22%  Similarity=0.336  Sum_probs=53.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++||+++|+.||...     .....+.......    ..+     .+               ...+
T Consensus       220 ~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~~~~~~~~~~~~~----~~~-----~~---------------~~~~  270 (496)
T PTZ00283        220 KPYSKKADMFSLGVLLYELLTLKRPFDGE-----NMEEVMHKTLAGR----YDP-----LP---------------PSIS  270 (496)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHhcCC----CCC-----CC---------------CCCC
Confidence            45789999999999999999999998631     1222211111000    000     00               1344


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+..++..||+.+|.+||++.+++.+
T Consensus       271 ~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        271 PEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            567889999999999999999998754


No 128
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.30  E-value=3.2e-12  Score=86.45  Aligned_cols=78  Identities=15%  Similarity=0.127  Sum_probs=50.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++|||||||++||+++|+.||....    . .........     ...+.+.  .               ....+.
T Consensus       184 ~~~~~~Dv~slGvil~el~~g~~p~~~~~----~-~~~~~~~~~-----~~~~~~~--~---------------~~~~~~  236 (282)
T cd06643         184 PYDYKADVWSLGITLIEMAQIEPPHHELN----P-MRVLLKIAK-----SEPPTLA--Q---------------PSRWSS  236 (282)
T ss_pred             CCCccchhhhHHHHHHHHccCCCCccccC----H-HHHHHHHhh-----cCCCCCC--C---------------ccccCH
Confidence            46679999999999999999999986321    1 111000000     0000000  0               012345


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+++..||+.+|.+||++.+++.
T Consensus       237 ~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         237 EFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            6788999999999999999998874


No 129
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.30  E-value=4.5e-12  Score=86.13  Aligned_cols=77  Identities=17%  Similarity=0.134  Sum_probs=49.8

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      ++.++|||||||+++|+++|+.||....    ...... .     ......+.+..  +               ......
T Consensus       210 ~~~~~Di~slGvi~~el~~g~~p~~~~~----~~~~~~-~-----~~~~~~~~~~~--~---------------~~~~~~  262 (291)
T cd06639         210 YDARCDVWSLGITAIELGDGDPPLFDMH----PVKTLF-K-----IPRNPPPTLLH--P---------------EKWCRS  262 (291)
T ss_pred             cCCccchHHHHHHHHHHhhCCCCCCCCc----HHHHHH-H-----HhcCCCCCCCc--c---------------cccCHH
Confidence            6789999999999999999999986321    000000 0     00000000000  0               022345


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      +.+++.+||+.+|++||++.+++.
T Consensus       263 l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         263 FNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             HHHHHHHHhhcChhhCcCHHHHhc
Confidence            788999999999999999999875


No 130
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.30  E-value=4.1e-12  Score=85.14  Aligned_cols=78  Identities=17%  Similarity=0.116  Sum_probs=50.9

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||++++|+++|..||.....     ......     ......+.+.                 .......
T Consensus       194 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~-----~~~~~~~~~~-----------------~~~~~~~  246 (275)
T cd06608         194 SYDARSDVWSLGITAIELADGKPPLCDMHP-----MRALFK-----IPRNPPPTLK-----------------SPENWSK  246 (275)
T ss_pred             CccccccHHHhHHHHHHHHhCCCCccccch-----HHHHHH-----hhccCCCCCC-----------------chhhcCH
Confidence            467789999999999999999999863210     000000     0000000000                 0012445


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       247 ~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         247 KFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HHHHHHHHHhhcChhhCcCHHHHhc
Confidence            7788999999999999999999875


No 131
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.30  E-value=1.7e-12  Score=86.47  Aligned_cols=78  Identities=12%  Similarity=0.142  Sum_probs=51.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++++++|..||...     ...........+.... +        +               ...+
T Consensus       175 ~~~~~~~Dv~slG~i~~~l~~g~~p~~~~-----~~~~~~~~~~~~~~~~-~--------~---------------~~~~  225 (255)
T cd08219         175 MPYNNKSDIWSLGCILYELCTLKHPFQAN-----SWKNLILKVCQGSYKP-L--------P---------------SHYS  225 (255)
T ss_pred             CCcCchhhhhhhchhheehhhccCCCCCC-----CHHHHHHHHhcCCCCC-C--------C---------------cccC
Confidence            34678999999999999999999998631     1111111110000000 0        0               1233


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++.+||+.+|.+||++.+++..
T Consensus       226 ~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         226 YELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            457788999999999999999998753


No 132
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.29  E-value=3.4e-12  Score=84.90  Aligned_cols=77  Identities=13%  Similarity=0.197  Sum_probs=50.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++++++|..||....     ............    ..     ..+               ...+
T Consensus       176 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~----~~-----~~~---------------~~~~  226 (256)
T cd08220         176 KPYNQKSDIWALGCVLYELASLKRAFEAAN-----LPALVLKIMSGT----FA-----PIS---------------DRYS  226 (256)
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCcccCc-----hHHHHHHHHhcC----CC-----CCC---------------CCcC
Confidence            346789999999999999999999986321     111110000000    00     000               0234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..++..||..+|++||++.+++.
T Consensus       227 ~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         227 PDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhh
Confidence            56788999999999999999999875


No 133
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.29  E-value=4.5e-12  Score=86.21  Aligned_cols=78  Identities=14%  Similarity=0.111  Sum_probs=50.3

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++|||||||++||+++|..||....     ...........     ..+...                 .....+.
T Consensus       191 ~~~~~~Dv~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~-----~~~~~~-----------------~~~~~~~  243 (292)
T cd06644         191 PYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKS-----EPPTLS-----------------QPSKWSM  243 (292)
T ss_pred             CCCchhhhHhHHHHHHHHhcCCCCCcccc-----HHHHHHHHhcC-----CCccCC-----------------CCcccCH
Confidence            35778999999999999999999985321     11111110000     000000                 0013344


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+++.+||..+|++||++.++++
T Consensus       244 ~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         244 EFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhc
Confidence            6788999999999999999999975


No 134
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.29  E-value=4.1e-12  Score=85.33  Aligned_cols=83  Identities=16%  Similarity=0.287  Sum_probs=50.2

Q ss_pred             CCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .++.++|||||||++||+++ |..||.....     .................+.+                   ....+
T Consensus       185 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------------------~~~~~  240 (269)
T cd05042         185 DQTKKSNIWSLGVTMWELFTAADQPYPDLSD-----EQVLKQVVREQDIKLPKPQL-------------------DLKYS  240 (269)
T ss_pred             ccchhhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHHHhhccCccCCCCcc-------------------cccCC
Confidence            46789999999999999999 6777753211     01111100000001111110                   01334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      ..+..++..|| .+|++||++.+|+..|.
T Consensus       241 ~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         241 DRWYEVMQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             HHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence            45567888899 49999999999998763


No 135
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.29  E-value=4e-12  Score=86.38  Aligned_cols=84  Identities=19%  Similarity=0.307  Sum_probs=56.0

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +.++.++|||||||+++|+++ +..||....     ..+....        ..+.... ..+               ..+
T Consensus       196 ~~~~~~~DvwslG~~l~el~~~~~~p~~~~~-----~~~~~~~--------~~~~~~~-~~~---------------~~~  246 (288)
T cd05061         196 GVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-----NEQVLKF--------VMDGGYL-DQP---------------DNC  246 (288)
T ss_pred             CCCChHhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHH--------HHcCCCC-CCC---------------CCC
Confidence            457889999999999999998 677875311     1111110        0000000 000               123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      +..+.+++..||+.+|.+||++.++++.|++...
T Consensus       247 ~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~  280 (288)
T cd05061         247 PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLH  280 (288)
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcC
Confidence            4578899999999999999999999999887543


No 136
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.29  E-value=4.5e-12  Score=87.93  Aligned_cols=28  Identities=32%  Similarity=0.587  Sum_probs=25.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||+++|+++|+.||..
T Consensus       177 ~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         177 THYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             CCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            4578899999999999999999999963


No 137
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.29  E-value=3.6e-12  Score=86.36  Aligned_cols=92  Identities=17%  Similarity=0.240  Sum_probs=54.6

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ++.++.++|||||||+++|+++|+.||.......... ..     .....+.+.........           .......
T Consensus       176 ~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~-----------~~~~~~~  238 (284)
T cd06620         176 GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ-DD-----PMGILDLLQQIVQEPPP-----------RLPSSDF  238 (284)
T ss_pred             cCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh-hh-----hhHHHHHHHHHhhccCC-----------CCCchhc
Confidence            3467889999999999999999999987432211000 00     00000000000000000           0000124


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      +..+.+++..||..+|++||++.+++++.
T Consensus       239 ~~~~~~li~~~l~~dp~~Rpt~~e~~~~~  267 (284)
T cd06620         239 PEDLRDFVDACLLKDPTERPTPQQLCAMP  267 (284)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence            55678899999999999999999998763


No 138
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.28  E-value=4.8e-12  Score=84.31  Aligned_cols=77  Identities=10%  Similarity=0.175  Sum_probs=51.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|+.||...     ...........+    ... ..    +               ....
T Consensus       177 ~~~~~~~Dv~slG~il~~l~~g~~~~~~~-----~~~~~~~~~~~~----~~~-~~----~---------------~~~~  227 (257)
T cd08223         177 KPYNYKSDVWALGCCVYEMATLKHAFNAK-----DMNSLVYRIIEG----KLP-PM----P---------------KDYS  227 (257)
T ss_pred             CCCCchhhhHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHhc----CCC-CC----c---------------cccC
Confidence            45678999999999999999999998631     111111110000    000 00    0               1344


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++..||+.+|.+||++.+++.
T Consensus       228 ~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         228 PELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHHHHHHHhccCcccCCCHHHHhc
Confidence            56788999999999999999999875


No 139
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28  E-value=5.5e-12  Score=85.02  Aligned_cols=78  Identities=23%  Similarity=0.257  Sum_probs=53.9

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..|+.||||||+||+++||...++||...     .+.+.-.+     +...                  ++++......
T Consensus       202 ~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~K-----I~qg------------------d~~~~p~~~Y  253 (375)
T KOG0591|consen  202 ESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKK-----IEQG------------------DYPPLPDEHY  253 (375)
T ss_pred             cCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHH-----HHcC------------------CCCCCcHHHh
Confidence            357999999999999999999999999732     22221111     1110                  1222233467


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVV  107 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~  107 (122)
                      +..+..|+..|+..||..||+...++
T Consensus       254 S~~l~~li~~ci~vd~~~RP~t~~~v  279 (375)
T KOG0591|consen  254 STDLRELINMCIAVDPEQRPDTVPYV  279 (375)
T ss_pred             hhHHHHHHHHHccCCcccCCCcchHH
Confidence            77888999999999999999843333


No 140
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.28  E-value=4.9e-12  Score=85.73  Aligned_cols=105  Identities=15%  Similarity=0.110  Sum_probs=54.2

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhh--ccchhHhh--cCchhhhHhhhccCCCCCccchhh
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMA--LPEKIMEI--VDPSILMELMANNCMIPEDRGRAK   77 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   77 (122)
                      +..++.++|||||||+++|+++|+.||...... ..+.......  .+......  .++........ ............
T Consensus       175 ~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  252 (287)
T cd07848         175 GAPYGKAVDMWSVGCILGELSDGQPLFPGESEI-DQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFP-AVNHPQSLERRY  252 (287)
T ss_pred             CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhhCCCCHHHHHhhhccchhcccccC-cccCcccHHHhh
Confidence            346788999999999999999999999642210 1111111000  00000000  00000000000 000000000000


Q ss_pred             HHHHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           78 TEECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        78 ~~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ....+..+.+++..|++.+|.+||++.+++.
T Consensus       253 ~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         253 LGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             hcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0123456889999999999999999998875


No 141
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.28  E-value=3.3e-12  Score=85.07  Aligned_cols=78  Identities=13%  Similarity=0.103  Sum_probs=52.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++++++|+.||....     .......         +.......               .....+
T Consensus       185 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~---------~~~~~~~~---------------~~~~~~  235 (265)
T cd08217         185 MSYDEKSDIWSLGCLIYELCALSPPFTARN-----QLQLASK---------IKEGKFRR---------------IPYRYS  235 (265)
T ss_pred             CCCCchhHHHHHHHHHHHHHHCCCcccCcC-----HHHHHHH---------HhcCCCCC---------------CccccC
Confidence            346788999999999999999999986321     1111110         00000000               001344


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++..|+..+|++||++.+|+++
T Consensus       236 ~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         236 SELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            577899999999999999999998863


No 142
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.27  E-value=6.3e-12  Score=83.75  Aligned_cols=77  Identities=17%  Similarity=0.244  Sum_probs=51.7

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||++++|+++|..||...     ...+..........    .+    .                ....+.
T Consensus       177 ~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~~~~----~~----~----------------~~~~~~  227 (256)
T cd08221         177 KYNFKSDIWALGCVLYELLTLKRTFDAT-----NPLNLVVKIVQGNY----TP----V----------------VSVYSS  227 (256)
T ss_pred             CCCCcchhHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHcCCC----CC----C----------------ccccCH
Confidence            4678899999999999999999998631     11111111100000    00    0                013445


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+.+++..||..+|.+||++.+++..
T Consensus       228 ~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         228 ELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHhhC
Confidence            67889999999999999999998865


No 143
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.27  E-value=2.9e-12  Score=86.68  Aligned_cols=76  Identities=24%  Similarity=0.283  Sum_probs=50.1

Q ss_pred             CCCCCccchhhhHHHHHHH-hcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMF-IRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~-t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .++.++||||||+++||++ +|..||.....  ......            ......  .+               ....
T Consensus       197 ~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~------------~~~~~~--~~---------------~~~~  245 (274)
T cd05076         197 SLSTAADKWSFGTTLLEICFDGEVPLKERTP--SEKERF------------YEKKHR--LP---------------EPSC  245 (274)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCccccCh--HHHHHH------------HHhccC--CC---------------CCCC
Confidence            4688999999999999995 68888853211  000000            000000  00               0112


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      ..+.+++..||+.+|.+||++.+++..|
T Consensus       246 ~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         246 KELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             hHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            3578899999999999999999999876


No 144
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.27  E-value=4.3e-12  Score=87.78  Aligned_cols=104  Identities=12%  Similarity=0.011  Sum_probs=53.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---h-hHhhcCchhhhHhhhccCCCCCccchhhH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---K-IMEIVDPSILMELMANNCMIPEDRGRAKT   78 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (122)
                      ..++.++|||||||+++||++|+.||.....  ......+......   . ................... .+.......
T Consensus       183 ~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~  259 (338)
T cd07859         183 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKK-QPVPFSQKF  259 (338)
T ss_pred             cccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhccc-CCCchHHhc
Confidence            4578899999999999999999999863211  0001111000000   0 0000000000000000000 000000000


Q ss_pred             HHHHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           79 EECLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        79 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ......+.+++.+||..+|.+||++.+++..
T Consensus       260 ~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h  290 (338)
T cd07859         260 PNADPLALRLLERLLAFDPKDRPTAEEALAD  290 (338)
T ss_pred             CCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence            0123456789999999999999999999854


No 145
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.27  E-value=2.9e-12  Score=85.46  Aligned_cols=80  Identities=14%  Similarity=0.128  Sum_probs=51.4

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||++++||++|..||.....     ..........   ......+.                 .....+.
T Consensus       180 ~~~~~~Di~slG~~l~~~~tg~~p~~~~~~-----~~~~~~~~~~---~~~~~~~~-----------------~~~~~~~  234 (262)
T cd06613         180 GYDGKCDIWALGITAIELAELQPPMFDLHP-----MRALFLISKS---NFPPPKLK-----------------DKEKWSP  234 (262)
T ss_pred             CcCchhhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhc---cCCCcccc-----------------chhhhhH
Confidence            577899999999999999999999863210     0000000000   00000000                 0113445


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       235 ~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         235 VFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhc
Confidence            6789999999999999999999875


No 146
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.27  E-value=8.2e-12  Score=85.31  Aligned_cols=80  Identities=15%  Similarity=0.149  Sum_probs=51.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++|+++|+.||.....    ...+. ......     .+.+.  .               .....
T Consensus       191 ~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~----~~~~~-~~~~~~-----~~~~~--~---------------~~~~~  243 (296)
T cd06654         191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENP----LRALY-LIATNG-----TPELQ--N---------------PEKLS  243 (296)
T ss_pred             CCCCccchHHHHHHHHHHHHhCCCCCCCCCH----HHhHH-HHhcCC-----CCCCC--C---------------ccccC
Confidence            3467899999999999999999999863211    00000 000000     00000  0               01334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++.+||..+|.+||++.+++..
T Consensus       244 ~~l~~li~~~l~~~p~~Rpt~~eil~~  270 (296)
T cd06654         244 AIFRDFLNRCLDMDVEKRGSAKELLQH  270 (296)
T ss_pred             HHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence            567788999999999999999999863


No 147
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.27  E-value=1.7e-12  Score=87.04  Aligned_cols=81  Identities=12%  Similarity=0.121  Sum_probs=50.9

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++|||||||+++|+++|+.||........    ....  ..  .....+....                 ....+.
T Consensus       185 ~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~----~~~~--~~--~~~~~~~~~~-----------------~~~~~~  239 (267)
T cd06646         185 GYNQLCDIWAVGITAIELAELQPPMFDLHPMRA----LFLM--SK--SNFQPPKLKD-----------------KTKWSS  239 (267)
T ss_pred             CCcchhhHHHHHHHHHHHHhCCCCccccchhhh----heee--ec--CCCCCCCCcc-----------------ccccCH
Confidence            467789999999999999999999853211000    0000  00  0000000000                 012345


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+.+++.+||+.+|.+||++.++++.
T Consensus       240 ~~~~li~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         240 TFHNFVKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHhcC
Confidence            77889999999999999999998764


No 148
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.26  E-value=7e-12  Score=85.17  Aligned_cols=79  Identities=14%  Similarity=0.111  Sum_probs=52.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|+.||....     ........     .....+....  .               ...+
T Consensus       190 ~~~~~~~Dv~slGv~l~ell~g~~p~~~~~-----~~~~~~~~-----~~~~~~~~~~--~---------------~~~~  242 (285)
T cd06648         190 LPYGTEVDIWSLGIMVIEMVDGEPPYFNEP-----PLQAMKRI-----RDNLPPKLKN--L---------------HKVS  242 (285)
T ss_pred             CCCCCcccHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHH-----HhcCCCCCcc--c---------------ccCC
Confidence            457889999999999999999999986311     11111110     0000000000  0               0234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++..||+.+|.+||++.++++
T Consensus       243 ~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         243 PRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHcc
Confidence            56789999999999999999999885


No 149
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.26  E-value=1.2e-11  Score=84.79  Aligned_cols=101  Identities=17%  Similarity=0.104  Sum_probs=53.5

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhh-hc------c--CCCCCccc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELM-AN------N--CMIPEDRG   74 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~--~~~~~~~~   74 (122)
                      .++.++|||||||++||+++|..||....... ...+....    .....++........ ..      .  ........
T Consensus       186 ~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (314)
T cd08216         186 GYNEKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKVRG----TVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVD  260 (314)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhc----cCccccccCchhhhcCCcCcccccccccchhhhhh
Confidence            36789999999999999999999997422111 11111100    000000000000000 00      0  00000000


Q ss_pred             hhhHHHHHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           75 RAKTEECLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        75 ~~~~~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..........+.+++..||+.+|++||++.++++.
T Consensus       261 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         261 HPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             cchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence            11112334567889999999999999999999853


No 150
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.26  E-value=4.2e-12  Score=85.26  Aligned_cols=77  Identities=16%  Similarity=0.203  Sum_probs=50.1

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      ++.++||||||+++||+++|+.||........  ..+...     ... ..+.                   .+......
T Consensus       188 ~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~~-----~~~-~~~~-------------------~~~~~~~~  240 (268)
T cd06624         188 YGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKVG-----MFK-IHPE-------------------IPESLSAE  240 (268)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhhh-----hhc-cCCC-------------------CCcccCHH
Confidence            67899999999999999999999863211000  000000     000 0000                   00133456


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      +..++.+||+.+|.+||++.+++.
T Consensus       241 ~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         241 AKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             HHHHHHHHcCCCchhCCCHHHHHh
Confidence            788899999999999999999875


No 151
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.26  E-value=7.1e-12  Score=85.66  Aligned_cols=79  Identities=15%  Similarity=0.137  Sum_probs=50.9

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++||+++|+.||....    ..... ......     ..+.+.  .               ....+
T Consensus       190 ~~~~~~~Dv~slGvil~~lltg~~pf~~~~----~~~~~-~~~~~~-----~~~~~~--~---------------~~~~~  242 (296)
T cd06655         190 KAYGPKVDIWSLGIMAIEMVEGEPPYLNEN----PLRAL-YLIATN-----GTPELQ--N---------------PEKLS  242 (296)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HHHHH-HHHHhc-----CCcccC--C---------------cccCC
Confidence            347789999999999999999999986321    11000 000000     000000  0               01334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++.+||..+|.+||++.+++.
T Consensus       243 ~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         243 PIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            46778899999999999999999874


No 152
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.26  E-value=7.9e-12  Score=84.42  Aligned_cols=79  Identities=14%  Similarity=0.173  Sum_probs=50.9

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||+++||+++|+.||....     ........     .....+.+.  .               ....+.
T Consensus       184 ~~~~~sDi~slG~il~~l~~g~~p~~~~~-----~~~~~~~~-----~~~~~~~~~--~---------------~~~~~~  236 (280)
T cd06611         184 PYDYKADIWSLGITLIELAQMEPPHHELN-----PMRVLLKI-----LKSEPPTLD--Q---------------PSKWSS  236 (280)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCcccCC-----HHHHHHHH-----hcCCCCCcC--C---------------cccCCH
Confidence            46778999999999999999999986321     11111000     000000000  0               012345


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+.+++..||+.+|.+||++.+++..
T Consensus       237 ~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         237 SFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHhcC
Confidence            67889999999999999999999754


No 153
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.26  E-value=5.4e-12  Score=86.03  Aligned_cols=80  Identities=25%  Similarity=0.304  Sum_probs=51.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||++++|+++|+.||......    .+.........     .+....                 ....+.
T Consensus       194 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~-----~~~~~~-----------------~~~~~~  247 (296)
T cd06618         194 KYDIRADVWSLGISLVELATGQFPYKNCKTE----FEVLTKILQEE-----PPSLPP-----------------NEGFSP  247 (296)
T ss_pred             ccccchhHHHHHHHHHHHHhCCCCCCcchhH----HHHHHHHhcCC-----CCCCCC-----------------CCCCCH
Confidence            4678999999999999999999998632110    01110000000     000000                 002345


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+.+++..||+.+|.+||++.+++..
T Consensus       248 ~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         248 DFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcC
Confidence            67889999999999999999999754


No 154
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.25  E-value=1e-11  Score=83.17  Aligned_cols=77  Identities=18%  Similarity=0.186  Sum_probs=51.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|..||....    .... +..     ......+..                   +...+
T Consensus       187 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~-~~~-----~~~~~~~~~-------------------~~~~~  237 (267)
T cd06628         187 TSYTRKADIWSLGCLVVEMLTGKHPFPDCT----QLQA-IFK-----IGENASPEI-------------------PSNIS  237 (267)
T ss_pred             CCCCchhhhHHHHHHHHHHhhCCCCCCCcc----HHHH-HHH-----HhccCCCcC-------------------CcccC
Confidence            356788999999999999999999986321    1100 000     000111110                   01334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..++..||+.+|.+||++.+++.
T Consensus       238 ~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         238 SEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHhh
Confidence            56788899999999999999999875


No 155
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.25  E-value=9.1e-12  Score=86.16  Aligned_cols=27  Identities=26%  Similarity=0.326  Sum_probs=24.7

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++|||||||+++|+++|+.||..
T Consensus       186 ~~~~~~DiwslG~il~el~~g~~pf~~  212 (327)
T cd08227         186 GYDAKSDIYSVGITACELANGHVPFKD  212 (327)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            478899999999999999999999964


No 156
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.25  E-value=1.3e-11  Score=84.69  Aligned_cols=79  Identities=15%  Similarity=0.116  Sum_probs=51.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      +.++.++|||||||++||+++|..||....     -.......     .....+...                  .....
T Consensus       189 ~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~-----~~~~~~~~~------------------~~~~~  240 (308)
T cd06634         189 GQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHI-----AQNESPALQ------------------SGHWS  240 (308)
T ss_pred             CCCCcccchHHHHHHHHHHHcCCCCCcccc-----HHHHHHHH-----hhcCCCCcC------------------ccccc
Confidence            356789999999999999999999975311     00110000     000000000                  01344


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++.+||+.+|.+||++.+++..
T Consensus       241 ~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         241 EYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             HHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            567889999999999999999998765


No 157
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.24  E-value=1.2e-11  Score=85.24  Aligned_cols=80  Identities=18%  Similarity=0.196  Sum_probs=52.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      +.++.++|||||||+++|+++|+.||....     .......     ......+..                  .....+
T Consensus       199 ~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~~~~~~~-----~~~~~~~~~------------------~~~~~~  250 (317)
T cd06635         199 GQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYH-----IAQNESPTL------------------QSNEWS  250 (317)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHH-----HHhccCCCC------------------CCcccc
Confidence            457889999999999999999999986311     0000000     000000000                  001334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      ..+.+++.+||+.+|.+||++.+++..+
T Consensus       251 ~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         251 DYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence            5678899999999999999999998753


No 158
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.24  E-value=1.1e-11  Score=82.79  Aligned_cols=81  Identities=19%  Similarity=0.210  Sum_probs=51.8

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||++++||++|+.||..... ...+.....    .     ..+......              .....+.
T Consensus       183 ~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-~~~~~~~~~----~-----~~~~~~~~~--------------~~~~~~~  238 (267)
T cd06610         183 GYDFKADIWSFGITAIELATGAAPYSKYPP-MKVLMLTLQ----N-----DPPSLETGA--------------DYKKYSK  238 (267)
T ss_pred             CcCcccchHhHhHHHHHHHhCCCCccccCh-hhhHHHHhc----C-----CCCCcCCcc--------------ccccccH
Confidence            578899999999999999999999864221 111111100    0     000000000              0013345


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+++..||+.+|++||++.+++.
T Consensus       239 ~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         239 SFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhh
Confidence            6788999999999999999999875


No 159
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.24  E-value=8.5e-12  Score=84.31  Aligned_cols=100  Identities=12%  Similarity=0.068  Sum_probs=51.7

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc--hhHhhcC--chhhhHhhhccCCCCCccchhhHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE--KIMEIVD--PSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      .++.++|||||||+++|+++|+.||...... .............  .......  .......+    ............
T Consensus       178 ~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  252 (285)
T cd07861         178 RYSTPVDIWSIGTIFAEMATKKPLFHGDSEI-DQLFRIFRILGTPTEDVWPGVTSLPDYKNTFP----KWKKGSLRSAVK  252 (285)
T ss_pred             CcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCChhhhhcchhhHHHHhhcc----ccCcchhHHhcC
Confidence            3678899999999999999999998632110 0111111000000  0000000  00000000    000000000011


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.++.+++.+||..+|.+||++.+++.
T Consensus       253 ~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         253 NLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             CCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            23456678999999999999999999874


No 160
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.24  E-value=1.2e-11  Score=83.12  Aligned_cols=28  Identities=25%  Similarity=0.430  Sum_probs=24.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||+++|+++|+.||..
T Consensus       184 ~~~~~~~Dv~slG~i~~el~~g~~pf~~  211 (266)
T cd06651         184 EGYGRKADVWSLGCTVVEMLTEKPPWAE  211 (266)
T ss_pred             CCCCchhhhHHHHHHHHHHHHCCCCccc
Confidence            3467899999999999999999999863


No 161
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.24  E-value=8.7e-12  Score=84.04  Aligned_cols=77  Identities=18%  Similarity=0.227  Sum_probs=50.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||+++|++++|..||....     .......     ......+.+..                  ...+.
T Consensus       178 ~~~~~~Dv~slG~~l~~ll~g~~p~~~~~-----~~~~~~~-----~~~~~~~~~~~------------------~~~~~  229 (277)
T cd06917         178 YYDTKADIWSLGITIYEMATGNPPYSDVD-----AFRAMML-----IPKSKPPRLED------------------NGYSK  229 (277)
T ss_pred             ccccchhHHHHHHHHHHHHhCCCCCCCCC-----hhhhhhc-----cccCCCCCCCc------------------ccCCH
Confidence            36789999999999999999999986321     1010000     00000000000                  01345


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+++..||..+|++||++.+++.
T Consensus       230 ~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         230 LLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHhh
Confidence            6788999999999999999999975


No 162
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.24  E-value=1.3e-11  Score=87.28  Aligned_cols=85  Identities=14%  Similarity=0.215  Sum_probs=54.7

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      -|+.|+|||||||+..|+.+|..||....     ..+.+.....+..+...-..+.               -.......+
T Consensus       208 GYdfKaDIwSfGITA~ELA~G~aPf~k~p-----PmkvLl~tLqn~pp~~~t~~~~---------------~d~~k~~~k  267 (516)
T KOG0582|consen  208 GYDFKADIWSFGITACELAHGHAPFSKYP-----PMKVLLLTLQNDPPTLLTSGLD---------------KDEDKKFSK  267 (516)
T ss_pred             CccchhhhhhhhHHHHHHhcCCCCcccCC-----hHHHHHHHhcCCCCCcccccCC---------------hHHhhhhcH
Confidence            38899999999999999999999996322     1111111111111111100000               111124456


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.++...|++.||..|||+++++.
T Consensus       268 sf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  268 SFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHhc
Confidence            8889999999999999999999874


No 163
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.23  E-value=6.2e-12  Score=85.42  Aligned_cols=81  Identities=20%  Similarity=0.218  Sum_probs=51.3

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..++.++|||||||++||+++|+.||....... ......         ..+... ....+               ...
T Consensus       175 ~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~~---------~~~~~~-~~~~~---------------~~~  228 (285)
T cd05631         175 NEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-KREEVD---------RRVKED-QEEYS---------------EKF  228 (285)
T ss_pred             CCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-hHHHHH---------HHhhcc-cccCC---------------ccC
Confidence            3568899999999999999999999997432110 000000         000000 00000               123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCC-----hHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERME-----MRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps-----~~~v~~  108 (122)
                      +..+..++..||..+|.+||+     +.+++.
T Consensus       229 s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         229 SEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            456788999999999999997     677775


No 164
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.23  E-value=9.2e-12  Score=84.08  Aligned_cols=78  Identities=21%  Similarity=0.231  Sum_probs=51.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||++++|+++|+.||.........+...         .....+.+.                  ....+.
T Consensus       183 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~---------~~~~~~~~~------------------~~~~~~  235 (283)
T cd06617         183 GYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQV---------VEEPSPQLP------------------AEKFSP  235 (283)
T ss_pred             ccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHH---------HhcCCCCCC------------------ccccCH
Confidence            46789999999999999999999986321110000000         000000000                  012345


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+++..||..+|.+||++.+++.
T Consensus       236 ~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         236 EFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            6788999999999999999999985


No 165
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.23  E-value=1.5e-11  Score=86.99  Aligned_cols=93  Identities=20%  Similarity=0.286  Sum_probs=68.4

Q ss_pred             CCccchhhhHHHHHHHhc----------ccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchh
Q 036557            7 MTGDVYSFGILLLEMFIR----------RRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRA   76 (122)
Q Consensus         7 ~~sDV~SfGv~l~el~t~----------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (122)
                      ..+||||||.|+||+..+          +.||+.....+..+.+...-...++.+..++++                  .
T Consensus       405 k~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnr------------------W  466 (513)
T KOG2052|consen  405 KRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNR------------------W  466 (513)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcc------------------c
Confidence            358999999999999874          468877766666655544333333333333333                  2


Q ss_pred             hHHHHHHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHhh
Q 036557           77 KTEECLNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRESF  117 (122)
Q Consensus        77 ~~~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~~  117 (122)
                      ........+.++|..||..+|..|-|+-.+.+.|.++.++-
T Consensus       467 ~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~  507 (513)
T KOG2052|consen  467 KSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSD  507 (513)
T ss_pred             ccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcCh
Confidence            33377888999999999999999999999999999988643


No 166
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.23  E-value=1.2e-11  Score=83.08  Aligned_cols=81  Identities=21%  Similarity=0.275  Sum_probs=51.3

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      ++.++||||||++++|+++|..||...    ....... ..........+....                   ....+..
T Consensus       189 ~~~~~Dv~slG~~l~~l~~g~~p~~~~----~~~~~~~-~~~~~~~~~~~~~~~-------------------~~~~~~~  244 (272)
T cd06629         189 YSAKVDIWSLGCVVLEMFAGRRPWSDE----EAIAAMF-KLGNKRSAPPIPPDV-------------------SMNLSPV  244 (272)
T ss_pred             CCccchhHHHHHHHHHHHhCCCCCcCc----chHHHHH-HhhccccCCcCCccc-------------------cccCCHH
Confidence            678899999999999999999998521    1111111 100000000011100                   0133457


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      +.+++..||..+|++||++.+|+..
T Consensus       245 ~~~li~~~l~~~p~~Rps~~~il~~  269 (272)
T cd06629         245 ALDFLNACFTINPDNRPTARELLQH  269 (272)
T ss_pred             HHHHHHHHhcCChhhCCCHHHHhhC
Confidence            7889999999999999999998753


No 167
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.23  E-value=9.4e-12  Score=84.15  Aligned_cols=100  Identities=11%  Similarity=0.125  Sum_probs=51.8

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhh--c---cchhHhhcCchh-hhHhhhccCCCCCccchhh
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMA--L---PEKIMEIVDPSI-LMELMANNCMIPEDRGRAK   77 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   77 (122)
                      .++.++||||||++++|+++|+.||....    .+..+....  .   ........+... ...... ............
T Consensus       177 ~~~~~~Dv~slG~~l~el~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  251 (286)
T cd07846         177 KYGRAVDIWAVGCLVTEMLTGEPLFPGDS----DIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL-PEVKEIEPLEKR  251 (286)
T ss_pred             ccCchHhHHHHHHHHHHHHcCCCCCCCCc----hHHHHHHHHHHhCCCchhhHHHhccchHhhcccc-ccccCcchHHHh
Confidence            46788999999999999999998885321    111110000  0   000000000000 000000 000000000000


Q ss_pred             HHHHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           78 TEECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        78 ~~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ....+..+.+++..||..+|++||++.+++.
T Consensus       252 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         252 FPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             CCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            0133567889999999999999999999875


No 168
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.23  E-value=1.9e-11  Score=82.79  Aligned_cols=80  Identities=18%  Similarity=0.236  Sum_probs=51.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++|||||||+++|+++|+.||.....  .........     ......+.                   .......
T Consensus       183 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~-----~~~~~~~~-------------------~~~~~~~  236 (286)
T cd06622         183 TYTVQSDVWSLGLSILEMALGRYPYPPETY--ANIFAQLSA-----IVDGDPPT-------------------LPSGYSD  236 (286)
T ss_pred             CCCcccchHhHHHHHHHHHhCCCCCCCcch--hhHHHHHHH-----HhhcCCCC-------------------CCcccCH
Confidence            357899999999999999999999863210  000000000     00000000                   0113455


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+..++.+||+.+|.+||++.+++..
T Consensus       237 ~~~~li~~~l~~~p~~Rp~~~~l~~~  262 (286)
T cd06622         237 DAQDFVAKCLNKIPNRRPTYAQLLEH  262 (286)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHhcC
Confidence            67889999999999999999998863


No 169
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.23  E-value=3.8e-11  Score=81.09  Aligned_cols=102  Identities=15%  Similarity=0.024  Sum_probs=53.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchh-hhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSI-LMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++||++|..||..... ...+..+................. .....   ...............
T Consensus       181 ~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  256 (287)
T cd07838         181 SSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWPRNVSLPRSSF---PSYTPRSFKSFVPEI  256 (287)
T ss_pred             CCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHhcCCCcccchhhc---ccccccchhhhhhhh
Confidence            4578899999999999999999888863211 111111111100000000000000 00000   000000001111133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ...+.+++..||+.+|.+||++.+++.
T Consensus       257 ~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         257 CEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             hHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            466788999999999999999999874


No 170
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.23  E-value=7.1e-12  Score=84.81  Aligned_cols=84  Identities=18%  Similarity=0.287  Sum_probs=52.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcH--HHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTL--HEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      ..++.++||||||+++||+++|+.||..........  ......     ......+.+.                  ...
T Consensus       168 ~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~------------------~~~  224 (279)
T cd06619         168 EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQC-----IVDEDPPVLP------------------VGQ  224 (279)
T ss_pred             CCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHH-----HhccCCCCCC------------------CCc
Confidence            457889999999999999999999986432211110  000000     0000000000                  002


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+..+.+++.+||+.+|.+||++.+++..
T Consensus       225 ~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         225 FSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             CCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            23467889999999999999999998754


No 171
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.22  E-value=9e-12  Score=84.22  Aligned_cols=27  Identities=7%  Similarity=-0.076  Sum_probs=23.8

Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      +..+.+++.+||+.+|.+|||+.+++.
T Consensus       254 ~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         254 NSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             CHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            456778999999999999999999875


No 172
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.22  E-value=6.5e-12  Score=84.22  Aligned_cols=81  Identities=14%  Similarity=0.128  Sum_probs=50.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      +.++.++|||||||+++|+++|..||.......    ...... ..   ....+....                 ....+
T Consensus       184 ~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~----~~~~~~-~~---~~~~~~~~~-----------------~~~~~  238 (267)
T cd06645         184 GGYNQLCDIWAVGITAIELAELQPPMFDLHPMR----ALFLMT-KS---NFQPPKLKD-----------------KMKWS  238 (267)
T ss_pred             CCCCchhhhHHHHHHHHHHhcCCCCcccccchh----hHHhhh-cc---CCCCCcccc-----------------cCCCC
Confidence            347789999999999999999999985321100    000000 00   000000000                 00223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++.+|++.+|++||++.+++.
T Consensus       239 ~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         239 NSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHhc
Confidence            45678999999999999999998875


No 173
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.22  E-value=1.4e-11  Score=82.60  Aligned_cols=79  Identities=19%  Similarity=0.217  Sum_probs=51.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|..||....    ...........    ....+..                   ....+
T Consensus       183 ~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~----~~~~~~~~~~~----~~~~~~~-------------------~~~~~  235 (265)
T cd06631         183 SGYGRKSDIWSIGCTVFEMATGKPPLASMD----RLAAMFYIGAH----RGLMPRL-------------------PDSFS  235 (265)
T ss_pred             CCCcchhhHHHHHHHHHHHHhCCCccccCC----hHHHHHHhhhc----cCCCCCC-------------------CCCCC
Confidence            346788999999999999999999986321    11111000000    0000000                   01334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..++.+||+.+|.+||++.+++.
T Consensus       236 ~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         236 AAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            56788999999999999999998874


No 174
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.22  E-value=1.7e-11  Score=82.60  Aligned_cols=102  Identities=12%  Similarity=-0.012  Sum_probs=54.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---hhHhhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---KIMEIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      +.++.++|||||||+++||++|..||.....  .............   .........-.....  -.............
T Consensus       174 ~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  249 (282)
T cd07831         174 GYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVLKKFRKSRHMNYN--FPSKKGTGLRKLLP  249 (282)
T ss_pred             CCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHHHhhccccccccc--CcccccccHHHHcc
Confidence            3467899999999999999999999863211  1111111111000   000000000000000  00000000001111


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..+.+++.+||..+|.+||++.+++.
T Consensus       250 ~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         250 NASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             cccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            34678899999999999999999999875


No 175
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.22  E-value=9.5e-12  Score=84.20  Aligned_cols=80  Identities=16%  Similarity=0.210  Sum_probs=50.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++||+++|+.||...... .........        ..........                ...+
T Consensus       169 ~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~--------~~~~~~~~~~----------------~~~~  223 (277)
T cd05607         169 EPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRR--------TLEDEVKFEH----------------QNFT  223 (277)
T ss_pred             CCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHH--------hhcccccccc----------------ccCC
Confidence            45789999999999999999999998632111 111111110        0000000000                0234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVV  107 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~  107 (122)
                      ..+.+++..||+.+|.+||++.+++
T Consensus       224 ~~~~~li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         224 EESKDICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             HHHHHHHHHHhccCHhhCCCCccch
Confidence            5678899999999999999997655


No 176
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.21  E-value=1.3e-11  Score=92.36  Aligned_cols=82  Identities=13%  Similarity=0.140  Sum_probs=60.6

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..+++|+|||++||+||-|+.++.||+...                 ...++    .+.+.         +  +.....
T Consensus       232 g~pI~eKsDIWALGclLYkLCy~t~PFe~sg-----------------~laIl----ng~Y~---------~--P~~p~y  279 (738)
T KOG1989|consen  232 GLPIGEKSDIWALGCLLYKLCYFTTPFEESG-----------------KLAIL----NGNYS---------F--PPFPNY  279 (738)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHhCCCcCcCc-----------------ceeEE----ecccc---------C--CCCccH
Confidence            4568999999999999999999999997321                 00111    11110         0  011266


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~  115 (122)
                      ...+..|+..|++.+|++||++-+|+..+.++..
T Consensus       280 s~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~  313 (738)
T KOG1989|consen  280 SDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN  313 (738)
T ss_pred             HHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence            7788999999999999999999999999888754


No 177
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.21  E-value=2.1e-11  Score=80.98  Aligned_cols=79  Identities=27%  Similarity=0.381  Sum_probs=51.8

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||+|++++|+++ |..||...     .............         ....+               ...
T Consensus       179 ~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~~~~---------~~~~~---------------~~~  229 (258)
T smart00219      179 GKFTSKSDVWSFGVLLWEIFTLGESPYPGM-----SNEEVLEYLKKGY---------RLPKP---------------ENC  229 (258)
T ss_pred             CCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhcCC---------CCCCC---------------CcC
Confidence            457889999999999999998 77777531     1111111100000         00000               124


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      +..+.+++.+||..+|.+||++.+++..|
T Consensus       230 ~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      230 PPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             CHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            45678899999999999999999998754


No 178
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.21  E-value=1.1e-11  Score=83.77  Aligned_cols=100  Identities=12%  Similarity=0.014  Sum_probs=52.3

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc-hhH---hhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE-KIM---EIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      .++.++||||||+++||+++|..||..... ...+.......... ...   ....+.......    .-..........
T Consensus       176 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  250 (283)
T cd07835         176 QYSTPVDIWSIGCIFAEMVNRRPLFPGDSE-IDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP----KWARQDLSKVVP  250 (283)
T ss_pred             ccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc----cccccchhhhcC
Confidence            467889999999999999999999863211 01111111110000 000   000000000000    000000000011


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .....+.+++.+||+.+|.+||++.+++.
T Consensus       251 ~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         251 NLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            23356788999999999999999999874


No 179
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.21  E-value=2.5e-11  Score=81.02  Aligned_cols=80  Identities=19%  Similarity=0.227  Sum_probs=52.7

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHH-HH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEE-CL   82 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   82 (122)
                      .++.++||||||++++|+++|..||.....  ....+........     ..+..    .               .. .+
T Consensus       176 ~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~-----~~~~~----~---------------~~~~~  229 (264)
T cd06623         176 SYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAICDG-----PPPSL----P---------------AEEFS  229 (264)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHhcC-----CCCCC----C---------------cccCC
Confidence            467889999999999999999999864321  1111111111000     00000    0               02 45


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++..||..+|.+||++.+++..
T Consensus       230 ~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         230 PEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            677889999999999999999999864


No 180
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.21  E-value=2.8e-11  Score=82.07  Aligned_cols=79  Identities=15%  Similarity=0.169  Sum_probs=51.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++++++|..||....    ........ ...    ... ...                 .....+
T Consensus       191 ~~~~~~~Dv~slGvil~~l~~g~~p~~~~~----~~~~~~~~-~~~----~~~-~~~-----------------~~~~~~  243 (286)
T cd06614         191 KDYGPKVDIWSLGIMCIEMAEGEPPYLREP----PLRALFLI-TTK----GIP-PLK-----------------NPEKWS  243 (286)
T ss_pred             CCCCCccccHHHHHHHHHHHhCCCCCCCCC----HHHHHHHH-Hhc----CCC-CCc-----------------chhhCC
Confidence            357889999999999999999999985311    11100000 000    000 000                 001244


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++..||+.+|.+||++.+++.
T Consensus       244 ~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         244 PEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHhh
Confidence            56788999999999999999999975


No 181
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.21  E-value=2.9e-11  Score=80.79  Aligned_cols=76  Identities=16%  Similarity=0.167  Sum_probs=51.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||+++++++++..||...     ..........     ....+..                   ....+.
T Consensus       181 ~~~~~~Dv~slG~~~~~l~~~~~~~~~~-----~~~~~~~~~~-----~~~~~~~-------------------~~~~~~  231 (260)
T cd08222         181 GYDSKSDIWSLGCILYEMCCLAHAFEGQ-----NFLSVVLRIV-----EGPTPSL-------------------PETYSR  231 (260)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCc-----cHHHHHHHHH-----cCCCCCC-------------------cchhcH
Confidence            4677899999999999999999998521     1111111100     0001000                   114456


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+++.+||..+|++||++.+++.
T Consensus       232 ~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         232 QLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhh
Confidence            7788999999999999999999875


No 182
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.21  E-value=3e-11  Score=81.99  Aligned_cols=100  Identities=15%  Similarity=0.081  Sum_probs=52.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhcc---chhHhhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALP---EKIMEIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      ..++.++|||||||+++|+++|+.||..... ...+.........   ........  +....-.   ............
T Consensus       184 ~~~~~~~DiwslG~il~el~~g~~~f~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~  257 (290)
T cd07862         184 SSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLGKILDVIGLPGEEDWPRDVA--LPRQAFH---SKSAQPIEKFVT  257 (290)
T ss_pred             CCCCCccchHHHHHHHHHHHcCCCCcCCCCH-HHHHHHHHHHhCCCChhhchhhhc--ccchhcc---CCCCCCHHHHcc
Confidence            4578899999999999999999999864211 1111111110000   00000000  0000000   000000000001


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .....+.+++.+|++.+|.+||++.+++.
T Consensus       258 ~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         258 DIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             CCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            23455678999999999999999999874


No 183
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.20  E-value=1.5e-11  Score=89.37  Aligned_cols=77  Identities=19%  Similarity=0.241  Sum_probs=51.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|+.||....     ..........+.    ..+     .+               ...+
T Consensus       246 ~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~-----~~~~~~~~~~~~----~~~-----~~---------------~~~s  296 (478)
T PTZ00267        246 KRYSKKADMWSLGVILYELLTLHRPFKGPS-----QREIMQQVLYGK----YDP-----FP---------------CPVS  296 (478)
T ss_pred             CCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC----CCC-----CC---------------ccCC
Confidence            457889999999999999999999986311     111111100000    000     00               1234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++..||..+|..||++.+++.
T Consensus       297 ~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        297 SGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHh
Confidence            56788999999999999999999864


No 184
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.20  E-value=1.2e-11  Score=85.55  Aligned_cols=36  Identities=17%  Similarity=0.210  Sum_probs=28.9

Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH--HHHHhHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA--KLCHTRE  115 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~--~l~~i~~  115 (122)
                      .....+.+++..||+.+|++|||+.+++.  .+..+.+
T Consensus       279 ~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~  316 (328)
T cd08226         279 TFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE  316 (328)
T ss_pred             hhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence            45567889999999999999999999973  3555544


No 185
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.20  E-value=2.6e-11  Score=82.02  Aligned_cols=101  Identities=15%  Similarity=0.046  Sum_probs=50.9

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhh--HhhhccCCCCCccchhhHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILM--ELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ++.++||||||++++|+++|+.||..... ...+..........  .....+....  .....-................
T Consensus       178 ~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (284)
T cd07860         178 YSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTP--DEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLD  254 (284)
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCCC--ChhhhhhhhHHHHHHhhcccccccCHHHHcccCC
Confidence            57789999999999999999999863211 11111111110000  0000000000  0000000000000000001223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++.+||+.+|.+||++.+++.
T Consensus       255 ~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         255 EDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            45678999999999999999999874


No 186
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.20  E-value=1.9e-11  Score=82.54  Aligned_cols=104  Identities=12%  Similarity=0.062  Sum_probs=52.9

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhcc--chhHhhcCchhhhHhhhccCCCCCccchh-hHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALP--EKIMEIVDPSILMELMANNCMIPEDRGRA-KTE   79 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   79 (122)
                      ..++.++||||||++++|+++|+.||...... ..+.........  .......+......... ........+.. ...
T Consensus       176 ~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  253 (286)
T cd07847         176 TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV-DQLYLIRKTLGDLIPRHQQIFSTNQFFKGLS-IPEPETREPLESKFP  253 (286)
T ss_pred             CCcCchhhhHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChHHhhhccccccccccc-CCCcccccCHHHHhc
Confidence            34678999999999999999999998642211 011111000000  00000000000000000 00000000000 001


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..+.+++..||+.+|++||++.+++.
T Consensus       254 ~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         254 NISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             cCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            23456789999999999999999998874


No 187
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.19  E-value=9.2e-12  Score=87.67  Aligned_cols=78  Identities=14%  Similarity=0.193  Sum_probs=54.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .-|+.|+||||+|++.+||.+|.+|+....+              -.....+...               .++.......
T Consensus       186 ~~Y~~KADIWSLGITaiEla~GePP~s~~hP--------------mrvlflIpk~---------------~PP~L~~~~S  236 (467)
T KOG0201|consen  186 SGYDTKADIWSLGITAIELAKGEPPHSKLHP--------------MRVLFLIPKS---------------APPRLDGDFS  236 (467)
T ss_pred             ccccchhhhhhhhHHHHHHhcCCCCCcccCc--------------ceEEEeccCC---------------CCCccccccC
Confidence            4689999999999999999999999863221              1111111111               1111112555


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++..|+..+|..||++.++++.
T Consensus       237 ~~~kEFV~~CL~k~P~~RpsA~~LLKh  263 (467)
T KOG0201|consen  237 PPFKEFVEACLDKNPEFRPSAKELLKH  263 (467)
T ss_pred             HHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence            677888899999999999999998753


No 188
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.19  E-value=1.6e-11  Score=85.33  Aligned_cols=28  Identities=36%  Similarity=0.605  Sum_probs=25.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||++||+++|+.||..
T Consensus       177 ~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         177 THYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            4578899999999999999999999864


No 189
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.19  E-value=2.8e-11  Score=81.47  Aligned_cols=81  Identities=25%  Similarity=0.335  Sum_probs=53.0

Q ss_pred             CCCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++||||||++++|+++ |..||....  .   ...+...........        ..               ...
T Consensus       193 ~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~--~---~~~~~~~~~~~~~~~--------~~---------------~~~  244 (275)
T cd05046         193 DDFSTKSDVWSFGVLMWEVFTQGELPFYGLS--D---EEVLNRLQAGKLELP--------VP---------------EGC  244 (275)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCccccc--h---HHHHHHHHcCCcCCC--------CC---------------CCC
Confidence            346778999999999999998 777875321  0   111111000000000        00               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      +..+.+++.+||..+|.+||++.+++..|.
T Consensus       245 ~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         245 PSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            457788999999999999999999998875


No 190
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.19  E-value=4e-11  Score=80.09  Aligned_cols=78  Identities=18%  Similarity=0.149  Sum_probs=49.7

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      ++.++||||||++++|+++|+.||.....    -......     ......+.+..                 .......
T Consensus       183 ~~~~~Dv~s~G~il~~l~~g~~pf~~~~~----~~~~~~~-----~~~~~~~~~~~-----------------~~~~~~~  236 (264)
T cd06626         183 HGRAADIWSLGCVVLEMATGKRPWSELDN----EFQIMFH-----VGAGHKPPIPD-----------------SLQLSPE  236 (264)
T ss_pred             CCcccchHHHHHHHHHHHhCCCCccCCcc----hHHHHHH-----HhcCCCCCCCc-----------------ccccCHH
Confidence            67889999999999999999999863211    0011000     00000000000                 0022455


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      +.+++..||+.+|.+||++.+++.
T Consensus       237 ~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         237 GKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhc
Confidence            678889999999999999999864


No 191
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.19  E-value=2.4e-11  Score=80.83  Aligned_cols=76  Identities=14%  Similarity=0.136  Sum_probs=49.8

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      ++.++|+||||++++++++|+.||....    .. .....     .......   ...+               ......
T Consensus       179 ~~~~~D~~slG~~l~~l~~g~~pf~~~~----~~-~~~~~-----~~~~~~~---~~~~---------------~~~~~~  230 (258)
T cd06632         179 YGLAADIWSLGCTVLEMATGKPPWSQLE----GV-AAVFK-----IGRSKEL---PPIP---------------DHLSDE  230 (258)
T ss_pred             CCchhhhHHHHHHHHHHHhCCCCcccCc----HH-HHHHH-----HHhcccC---CCcC---------------CCcCHH
Confidence            6788999999999999999999986321    11 11100     0000000   0000               123456


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      +.+++.+||+.+|++||++.+++.
T Consensus       231 ~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         231 AKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHHHHhhcCcccCcCHHHHhc
Confidence            678899999999999999999875


No 192
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.19  E-value=4.4e-11  Score=83.00  Aligned_cols=102  Identities=14%  Similarity=0.044  Sum_probs=53.8

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhc----CchhhhHhhhccCCCCCccchhhHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIV----DPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      .++.++||||||++++|+++|+.||.....  ......+............    ......... ......+........
T Consensus       188 ~~~~~~Di~slG~~l~el~~g~~pf~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  264 (334)
T cd07855         188 EYTTAIDMWSVGCIFAEMLGRRQLFPGKNY--VHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQ-NLPRKQPVPWSKIFP  264 (334)
T ss_pred             ccccccchHHHHHHHHHHHcCCCccCCCCh--HHHHHHHHHHhCCChhHhhhhhchhhHHHHHh-hcccCCCCCHHHHcc
Confidence            467899999999999999999999964211  0011111110000000000    000000000 000000000000011


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..+..++..||+.+|.+||++.+++.
T Consensus       265 ~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         265 KASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            34567889999999999999999999875


No 193
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.19  E-value=4.9e-11  Score=79.22  Aligned_cols=77  Identities=18%  Similarity=0.127  Sum_probs=51.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|+||||++++|+++|+.||....     .............    .                    .......
T Consensus       176 ~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~----~--------------------~~~~~~~  226 (256)
T cd08530         176 RPYSYKSDIWSLGCLLYEMATFAPPFEARS-----MQDLRYKVQRGKY----P--------------------PIPPIYS  226 (256)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCC----C--------------------CCchhhC
Confidence            356778999999999999999999986321     1111111000000    0                    0011344


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..++..|+..+|++||++.+++.
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         227 QDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            56788999999999999999999875


No 194
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.19  E-value=4.7e-11  Score=80.46  Aligned_cols=103  Identities=12%  Similarity=-0.038  Sum_probs=53.8

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhh--hHhhhccCCCCCccchhhHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSIL--MELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      .++.++||||||++++++++|+.||..... ...+.......... ..........  ......................
T Consensus       175 ~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (283)
T cd05118         175 GYSTPVDIWSVGCIFAELLSRRPLFPGKSE-IDQLFKIFRTLGTP-DPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNA  252 (283)
T ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCC-chHhcccchhhhhhhhhhhccccccCHHHhhhhh
Confidence            567899999999999999999998863211 00000110000000 0000000000  0000000000000001111245


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      +..+.+++..||+.+|.+||++.+++.
T Consensus       253 ~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         253 SPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             CHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            677889999999999999999999875


No 195
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.18  E-value=3.3e-11  Score=83.73  Aligned_cols=107  Identities=15%  Similarity=0.043  Sum_probs=56.4

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhcc----chhHhhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALP----EKIMEIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      .++.++|||||||+++|+++|+.||....  .............    .......+........ ...............
T Consensus       185 ~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  261 (337)
T cd07858         185 EYTTAIDVWSVGCIFAELLGRKPLFPGKD--YVHQLKLITELLGSPSEEDLGFIRNEKARRYIR-SLPYTPRQSFARLFP  261 (337)
T ss_pred             CCCCcccHHHHHHHHHHHHcCCCCCCCCC--hHHHHHHHHHHhCCCChHHhhhcCchhhhHHHH-hcCcccccCHHHHcc
Confidence            47889999999999999999999986421  1111111110000    0010001111000000 000000000000111


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHHH--HHHh
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVAK--LCHT  113 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~--l~~i  113 (122)
                      ..+..+.+++.+||+.+|.+||++.+++..  +..+
T Consensus       262 ~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         262 HANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             cCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence            345667899999999999999999999865  5443


No 196
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.18  E-value=2.8e-11  Score=79.88  Aligned_cols=78  Identities=15%  Similarity=0.148  Sum_probs=50.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||++++++++|+.||....     .......     ......+....                 ....+.
T Consensus       173 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~-----~~~~~~~~~~~-----------------~~~~~~  225 (253)
T cd05122         173 PYDYKADIWSLGITAIELAEGKPPYSELP-----PMKALFK-----IATNGPPGLRN-----------------PEKWSD  225 (253)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCCc-----hHHHHHH-----HHhcCCCCcCc-----------------ccccCH
Confidence            46789999999999999999999986321     0111000     00000000000                 001245


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+++..||+.+|.+||++.+++.
T Consensus       226 ~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         226 EFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhc
Confidence            6788999999999999999999875


No 197
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.18  E-value=3.1e-11  Score=83.11  Aligned_cols=79  Identities=18%  Similarity=0.194  Sum_probs=50.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      +.++.++||||||++++|+++|..||....    . ...........     .+...                  ....+
T Consensus       195 ~~~~~~sDv~slGvil~el~~g~~p~~~~~----~-~~~~~~~~~~~-----~~~~~------------------~~~~~  246 (313)
T cd06633         195 GQYDGKVDVWSLGITCIELAERKPPLFNMN----A-MSALYHIAQND-----SPTLQ------------------SNEWT  246 (313)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC----h-HHHHHHHHhcC-----CCCCC------------------ccccC
Confidence            457788999999999999999999986321    1 11110000000     00000                  00223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+..++.+||+.+|.+||++.+++..
T Consensus       247 ~~l~~li~~~l~~~P~~Rp~~~~~l~~  273 (313)
T cd06633         247 DSFRGFVDYCLQKIPQERPASAELLRH  273 (313)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            456788999999999999999998853


No 198
>PTZ00284 protein kinase; Provisional
Probab=99.18  E-value=4.1e-11  Score=86.79  Aligned_cols=29  Identities=21%  Similarity=0.412  Sum_probs=25.9

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      +..++.++|||||||++|||++|+.||..
T Consensus       319 ~~~~~~~~DiwSlGvil~elltG~~pf~~  347 (467)
T PTZ00284        319 GLGWMYSTDMWSMGCIIYELYTGKLLYDT  347 (467)
T ss_pred             cCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            34688899999999999999999999964


No 199
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.18  E-value=2e-11  Score=82.45  Aligned_cols=78  Identities=15%  Similarity=0.215  Sum_probs=51.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++|+++|..||....     .......     ......+.+                   ....+
T Consensus       176 ~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~-----~~~~~~~-----~~~~~~~~~-------------------~~~~~  226 (277)
T cd06641         176 SAYDSKADIWSLGITAIELAKGEPPHSELH-----PMKVLFL-----IPKNNPPTL-------------------EGNYS  226 (277)
T ss_pred             CCCCchhhHHHHHHHHHHHHcCCCCCCccc-----hHHHHHH-----HhcCCCCCC-------------------CcccC
Confidence            456788999999999999999999985311     0011000     000000000                   01334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++..||+.+|.+||++.+++..
T Consensus       227 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         227 KPLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence            567788999999999999999999874


No 200
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.18  E-value=4.2e-11  Score=79.30  Aligned_cols=78  Identities=15%  Similarity=0.093  Sum_probs=51.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      ..+.++||||||++++++++|..||....    .........        .........+               ...+.
T Consensus       179 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~--------~~~~~~~~~~---------------~~~~~  231 (260)
T cd06606         179 EYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAALYKI--------GSSGEPPEIP---------------EHLSE  231 (260)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHHHhc--------cccCCCcCCC---------------cccCH
Confidence            36789999999999999999999986422    111111110        0000000000               13356


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+++.+|+..+|++||++.+++.
T Consensus       232 ~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         232 EAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHHHHHhCcCChhhCCCHHHHhh
Confidence            7788899999999999999999875


No 201
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.18  E-value=3.1e-11  Score=83.77  Aligned_cols=105  Identities=11%  Similarity=0.079  Sum_probs=53.0

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhc--cchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMAL--PEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      .++.++||||||++++|+++|+.||...... ...........  .......+...........-...............
T Consensus       189 ~~~~~sDi~slG~~l~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (337)
T cd07852         189 RYTKGVDMWSVGCILGEMLLGKPLFPGTSTL-NQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKA  267 (337)
T ss_pred             cccccchHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCC
Confidence            4678899999999999999999998632111 00000000000  00000000000000000000000000000001123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      +..+.+++.+||+.+|++||++.+++..
T Consensus       268 ~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         268 SDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             CHHHHHHHHHhccCCcccccCHHHHhhC
Confidence            4577899999999999999999999864


No 202
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.18  E-value=2.6e-11  Score=84.48  Aligned_cols=109  Identities=10%  Similarity=0.036  Sum_probs=54.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhc-c-chhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMAL-P-EKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      .++.++|||||||+++|+++|+.||..... ...+........ + ....+.............................
T Consensus       191 ~~~~~~Dv~slGvil~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (342)
T cd07879         191 HYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-LDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKA  269 (342)
T ss_pred             ccCchHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCC
Confidence            477899999999999999999999863210 001111110000 0 0000111000000000000000000000000022


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHH--HHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAK--LCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~--l~~i  113 (122)
                      ...+.+++..||+.+|.+||++.+++..  ++..
T Consensus       270 ~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         270 SPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence            3457789999999999999999999854  4444


No 203
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.18  E-value=1.2e-11  Score=89.11  Aligned_cols=102  Identities=13%  Similarity=0.128  Sum_probs=53.5

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc--hhHhhcCchhhh-HhhhccCCCCCccchhhHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE--KIMEIVDPSILM-ELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   80 (122)
                      .++.++|||||||++|||++|..||..... ...+..........  .......+.... ..+.   ..........+..
T Consensus       247 ~~~~~~DiwSlGvil~elltG~~pf~~~~~-~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~p~~  322 (440)
T PTZ00036        247 NYTTHIDLWSLGCIIAEMILGYPIFSGQSS-VDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPD---VKPKDLKKVFPKG  322 (440)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCCHHHHHHhchhhhcccCCc---cCchhHHHHhccC
Confidence            588999999999999999999999864211 11111111110000  000000000000 0000   0000000000012


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+..+.+++..||..+|.+||++.+++.+
T Consensus       323 ~~~~~~~li~~~L~~dP~~R~ta~e~l~h  351 (440)
T PTZ00036        323 TPDDAINFISQFLKYEPLKRLNPIEALAD  351 (440)
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence            34567899999999999999999998743


No 204
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.17  E-value=2.1e-11  Score=83.21  Aligned_cols=80  Identities=15%  Similarity=0.119  Sum_probs=51.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      +.++.++||||||+++||+++|+.||........ +...    ....     .+..                 ......+
T Consensus       190 ~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~~----~~~~-----~~~~-----------------~~~~~~~  242 (293)
T cd06647         190 KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLI----ATNG-----TPEL-----------------QNPEKLS  242 (293)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eeeh----hcCC-----CCCC-----------------CCccccC
Confidence            4567899999999999999999999964211000 0000    0000     0000                 0001234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++..||..+|.+||++.+++.+
T Consensus       243 ~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         243 AIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            467789999999999999999999854


No 205
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.17  E-value=1.5e-11  Score=84.85  Aligned_cols=77  Identities=16%  Similarity=0.139  Sum_probs=51.0

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..++.++|||||||+++|+++|+.||....     ...........      ...    .+               ...
T Consensus       170 ~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----~~~~~~~i~~~------~~~----~~---------------~~~  219 (318)
T cd05570         170 YQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----EDELFQSILED------EVR----YP---------------RWL  219 (318)
T ss_pred             CCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----HHHHHHHHHcC------CCC----CC---------------CcC
Confidence            3567889999999999999999999986321     11111100000      000    00               023


Q ss_pred             HHHHHHHhhhcCCCCcCCCCCh-----HHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEM-----RGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~-----~~v~~  108 (122)
                      +..+.+++.+||+.+|.+||++     .+++.
T Consensus       220 ~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         220 SKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             CHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            4567889999999999999999     77654


No 206
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.17  E-value=4.7e-11  Score=81.67  Aligned_cols=80  Identities=16%  Similarity=0.159  Sum_probs=51.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|..||....    . ..........     ...... .                .....
T Consensus       192 ~~~~~~~Dv~slG~il~el~~g~~p~~~~~----~-~~~~~~~~~~-----~~~~~~-~----------------~~~~~  244 (297)
T cd06659         192 TPYGTEVDIWSLGIMVIEMVDGEPPYFSDS----P-VQAMKRLRDS-----PPPKLK-N----------------AHKIS  244 (297)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC----H-HHHHHHHhcc-----CCCCcc-c----------------cCCCC
Confidence            457889999999999999999999986321    1 1111100000     000000 0                00223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++..||+.+|.+||++.+++..
T Consensus       245 ~~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         245 PVLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            456788999999999999999999874


No 207
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.16  E-value=4.6e-11  Score=80.65  Aligned_cols=27  Identities=19%  Similarity=0.351  Sum_probs=23.9

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++||||||++++|+++|+.||..
T Consensus       175 ~~~~~~Di~s~G~~l~el~~g~~~~~~  201 (283)
T cd07830         175 SYSSPVDIWALGCIMAELYTLRPLFPG  201 (283)
T ss_pred             CcCCccchhhHHHHHHHHHhCCCccCC
Confidence            367899999999999999999988853


No 208
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.16  E-value=5.3e-11  Score=84.59  Aligned_cols=105  Identities=12%  Similarity=0.009  Sum_probs=54.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCC------CCcHHHHHHhhccchhHhh-cCc--hhhhHh--hhccCCCCC
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNE------GLTLHEFAKMALPEKIMEI-VDP--SILMEL--MANNCMIPE   71 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~--~~~~~~~~~   71 (122)
                      ..++.++|||||||++||+++|..|+......      ...+...+..... ...+. .+.  .+....  ........+
T Consensus       258 ~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~  336 (391)
T PHA03212        258 DPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGT-HPNEFPIDAQANLDEIYIGLAKKSSRKP  336 (391)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcC-ChhhcCcchhHHHHHHHHHHHhccCCCC
Confidence            46788999999999999999999886532211      0111111111100 00000 000  000000  000000000


Q ss_pred             c-cch-hhHHHHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           72 D-RGR-AKTEECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        72 ~-~~~-~~~~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      . .+. ......+..+..++.+|++.+|.+|||+.+++.
T Consensus       337 ~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        337 GSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             CCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            0 000 011134557888999999999999999999985


No 209
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.16  E-value=4.6e-11  Score=81.53  Aligned_cols=80  Identities=16%  Similarity=0.191  Sum_probs=51.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|+.||....    .. .....     ......+.....                 ....
T Consensus       193 ~~~~~~~Dv~slGvil~el~~g~~p~~~~~----~~-~~~~~-----~~~~~~~~~~~~-----------------~~~~  245 (292)
T cd06658         193 LPYGTEVDIWSLGIMVIEMIDGEPPYFNEP----PL-QAMRR-----IRDNLPPRVKDS-----------------HKVS  245 (292)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC----HH-HHHHH-----HHhcCCCccccc-----------------cccC
Confidence            356889999999999999999999986321    11 10000     001111111000                 0223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+..++..||..+|.+||++.++++.
T Consensus       246 ~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         246 SVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            456778889999999999999999864


No 210
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.16  E-value=2.8e-11  Score=82.88  Aligned_cols=83  Identities=18%  Similarity=0.161  Sum_probs=51.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|..||....     ..+........   ....+...                   ...+
T Consensus       191 ~~~~~~~Di~slG~vl~el~~g~~pf~~~~-----~~~~~~~~~~~---~~~~~~~~-------------------~~~~  243 (305)
T cd05609         191 QGYGKPVDWWAMGIILYEFLVGCVPFFGDT-----PEELFGQVISD---DIEWPEGD-------------------EALP  243 (305)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhc---ccCCCCcc-------------------ccCC
Confidence            457789999999999999999999986321     11111110000   00000000                   0234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCH  112 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~  112 (122)
                      ..+..++.+||+.+|.+||++..+.+.|+.
T Consensus       244 ~~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         244 ADAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             HHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            567899999999999999997555555443


No 211
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.16  E-value=1.2e-11  Score=82.62  Aligned_cols=81  Identities=15%  Similarity=0.143  Sum_probs=50.3

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||++++|+++|..||....     ...........    ...  ..               ......++.
T Consensus       169 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~----~~~--~~---------------~~~~~~~~~  222 (260)
T cd05611         169 GDDKMSDWWSLGCVIFEFLFGYPPFHAET-----PDAVFDNILSR----RIN--WP---------------EEVKEFCSP  222 (260)
T ss_pred             CCcchhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhc----ccC--CC---------------CcccccCCH
Confidence            46789999999999999999999986321     11111000000    000  00               000013456


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      .+.+++.+||+.+|++||++..+.+.|
T Consensus       223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         223 EAVDLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             HHHHHHHHHccCCHHHccCCCcHHHHH
Confidence            778999999999999999776554443


No 212
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.16  E-value=2.3e-11  Score=82.63  Aligned_cols=80  Identities=20%  Similarity=0.148  Sum_probs=50.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||+++||+++|+.||......  .....+        ...+... ....+               ...+
T Consensus       176 ~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~--~~~~~~--------~~~~~~~-~~~~~---------------~~~~  229 (285)
T cd05605         176 ERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK--VKREEV--------ERRVKED-QEEYS---------------EKFS  229 (285)
T ss_pred             CCCCccccchhHHHHHHHHHHCCCCCCCCchh--hHHHHH--------HHHhhhc-ccccC---------------cccC
Confidence            45788999999999999999999999642110  000000        0000000 00000               1344


Q ss_pred             HHHHHHhhhcCCCCcCCCC-----ChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERM-----EMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rp-----s~~~v~~  108 (122)
                      ..+.+++..||..+|.+||     ++.+++.
T Consensus       230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         230 EAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             HHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            5678899999999999999     7778754


No 213
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.15  E-value=6.1e-11  Score=80.31  Aligned_cols=103  Identities=14%  Similarity=0.015  Sum_probs=52.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|..||..... ...+............ .............-. ...............
T Consensus       182 ~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  258 (288)
T cd07863         182 STYATPVDMWSVGCIFAEMFRRKPLFCGNSE-ADQLGKIFDLIGLPPE-DDWPRDVTLPRGAFS-PRGPRPVQSVVPEIE  258 (288)
T ss_pred             CCCCCcchhhhHHHHHHHHHhCCcCcCCCCH-HHHHHHHHHHhCCCCh-hhCcccccccccccC-CCCCCchHHhCcCcC
Confidence            4578999999999999999999999863211 1111111110000000 000000000000000 000000000001234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++.+|++.||.+||++.+++.
T Consensus       259 ~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         259 ESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             HHHHHHHHHHhccCcccCCCHHHHhc
Confidence            56788999999999999999998874


No 214
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.15  E-value=8e-12  Score=86.05  Aligned_cols=77  Identities=12%  Similarity=0.142  Sum_probs=50.6

Q ss_pred             CCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHHHH
Q 036557            7 MTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNAII   86 (122)
Q Consensus         7 ~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (122)
                      .++||||+||++.||+||+.|+...   ........+.......+                        ..+...+....
T Consensus       201 ~~sDiWSlGCtVvEM~Tg~~PW~~~---~~~~~~~~~ig~~~~~P------------------------~ip~~ls~~a~  253 (313)
T KOG0198|consen  201 RESDIWSLGCTVVEMLTGKPPWSEF---FEEAEALLLIGREDSLP------------------------EIPDSLSDEAK  253 (313)
T ss_pred             ccchhhhcCCEEEeccCCCCcchhh---cchHHHHHHHhccCCCC------------------------CCCcccCHHHH
Confidence            4899999999999999999998642   00011111111111000                        11124455667


Q ss_pred             HHhhhcCCCCcCCCCChHHHHHHH
Q 036557           87 KTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        87 ~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      +++..|+..+|..|||+.+++..-
T Consensus       254 ~Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  254 DFLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             HHHHHHhhcCcccCcCHHHHhhCh
Confidence            888899999999999999998653


No 215
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.14  E-value=4.3e-11  Score=82.10  Aligned_cols=102  Identities=13%  Similarity=-0.019  Sum_probs=53.3

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---hhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---KIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      .++.++|||||||+++||++|+.||...... ..+..........   ...............  ...............
T Consensus       181 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  257 (309)
T cd07872         181 EYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-DELHLIFRLLGTPTEETWPGISSNDEFKNYN--FPKYKPQPLINHAPR  257 (309)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHhhhcchhhhhhhh--cCccCCCchhhhccC
Confidence            5788999999999999999999999643211 1111111110000   000000000000000  000000000001112


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+..+.+++.+|+..+|.+|||+.+++.
T Consensus       258 ~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         258 LDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             CCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            3456788999999999999999999875


No 216
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.14  E-value=5.3e-11  Score=80.21  Aligned_cols=80  Identities=13%  Similarity=0.146  Sum_probs=51.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|+.||............+....         .....  .               ....+
T Consensus       181 ~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------~~~~~--~---------------~~~~~  234 (267)
T PHA03390        181 HNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ---------QKKLP--F---------------IKNVS  234 (267)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh---------cccCC--c---------------ccccC
Confidence            4577889999999999999999999974322221111111110         00000  0               00334


Q ss_pred             HHHHHHhhhcCCCCcCCCCC-hHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERME-MRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps-~~~v~~  108 (122)
                      ..+.+++..|++.+|.+||+ +++++.
T Consensus       235 ~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        235 KNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHHHHHHHHHhccChhhCCchHHHHhc
Confidence            56788889999999999996 688763


No 217
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.14  E-value=2.9e-11  Score=82.17  Aligned_cols=100  Identities=11%  Similarity=-0.004  Sum_probs=52.0

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchh---HhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKI---MEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      .++.++||||||++++||++|..||..... ................   ............+    ...+.........
T Consensus       188 ~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  262 (295)
T cd07837         188 HYSTPVDIWSVGCIFAEMSRKQPLFPGDSE-LQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFP----QWKPQDLSRAVPD  262 (295)
T ss_pred             CCCchHHHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHHHhCCCChhhCcchhhccchhhcC----cccchhHHHhccc
Confidence            467899999999999999999999863210 0011111110000000   0000000000000    0000000000112


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ....+.+++..||..+|.+||++.+++.
T Consensus       263 ~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         263 LSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             cCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            4556788999999999999999998874


No 218
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.14  E-value=7.1e-11  Score=78.31  Aligned_cols=77  Identities=17%  Similarity=0.230  Sum_probs=51.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||+|++++++++|..||....     ............    ..     ..+               ....
T Consensus       178 ~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~----~~-----~~~---------------~~~~  228 (258)
T cd08215         178 KPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILKGQ----YP-----PIP---------------SQYS  228 (258)
T ss_pred             CCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhcCC----CC-----CCC---------------CCCC
Confidence            356789999999999999999999986321     111111100000    00     000               0334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..++..||..+|++||++.+++.
T Consensus       229 ~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         229 SELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            56788999999999999999999875


No 219
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.13  E-value=4.5e-11  Score=92.48  Aligned_cols=76  Identities=11%  Similarity=0.090  Sum_probs=51.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++|||||||++|||++|..||...    ..+...+......       +.+.  .                ...+.
T Consensus       219 ~~s~KSDVWSLG~ILYELLTGk~PF~~~----~~~~qli~~lk~~-------p~lp--i----------------~~~S~  269 (1021)
T PTZ00266        219 SYDDKSDMWALGCIIYELCSGKTPFHKA----NNFSQLISELKRG-------PDLP--I----------------KGKSK  269 (1021)
T ss_pred             CCCchhHHHHHHHHHHHHHHCCCCCCcC----CcHHHHHHHHhcC-------CCCC--c----------------CCCCH
Confidence            4788999999999999999999999631    1121211110000       0000  0                02235


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+|+..||..+|.+||++.+++.
T Consensus       270 eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        270 ELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             HHHHHHHHHhcCChhHCcCHHHHhc
Confidence            6788999999999999999999884


No 220
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.13  E-value=5.9e-11  Score=81.22  Aligned_cols=27  Identities=22%  Similarity=0.278  Sum_probs=24.5

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++||||+||+++||++|..||..
T Consensus       180 ~~~~~~DiwslG~il~~l~~g~~pf~~  206 (303)
T cd07869         180 EYSTCLDMWGVGCIFVEMIQGVAAFPG  206 (303)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            467889999999999999999999974


No 221
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.13  E-value=9.1e-11  Score=80.59  Aligned_cols=28  Identities=32%  Similarity=0.602  Sum_probs=24.9

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++||||||++++|+++|+.||..
T Consensus       173 ~~~~~~~DiwslG~~l~~l~~g~~p~~~  200 (308)
T cd06615         173 THYTVQSDIWSLGLSLVEMAIGRYPIPP  200 (308)
T ss_pred             CCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence            4578899999999999999999999863


No 222
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.13  E-value=2.7e-11  Score=82.83  Aligned_cols=79  Identities=14%  Similarity=0.113  Sum_probs=50.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++++++|..||........    .... ....     .+..                 ......+
T Consensus       190 ~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~----~~~~-~~~~-----~~~~-----------------~~~~~~~  242 (297)
T cd06656         190 KAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LYLI-ATNG-----TPEL-----------------QNPERLS  242 (297)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh----eeee-ccCC-----CCCC-----------------CCccccC
Confidence            4467889999999999999999999863211000    0000 0000     0000                 0001334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++.+||..+|++||++.+++.
T Consensus       243 ~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         243 AVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            45678889999999999999999986


No 223
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.13  E-value=4.2e-11  Score=81.42  Aligned_cols=80  Identities=20%  Similarity=0.226  Sum_probs=50.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|+.||.......  ......        .... ......+               ....
T Consensus       176 ~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~~~~~~--------~~~~-~~~~~~~---------------~~~~  229 (285)
T cd05630         176 ERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVE--------RLVK-EVQEEYS---------------EKFS  229 (285)
T ss_pred             CCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--hHHHHH--------hhhh-hhhhhcC---------------ccCC
Confidence            457889999999999999999999996421100  000000        0000 0000000               0234


Q ss_pred             HHHHHHhhhcCCCCcCCCCC-----hHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERME-----MRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps-----~~~v~~  108 (122)
                      ..+.+++..||+.+|.+||+     +.+++.
T Consensus       230 ~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         230 PDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            45688899999999999999     777765


No 224
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.13  E-value=3.6e-11  Score=80.05  Aligned_cols=76  Identities=22%  Similarity=0.298  Sum_probs=49.8

Q ss_pred             CCCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .++.++||||||+++||+++ +..|+.....  .......           ....... .                 ...
T Consensus       182 ~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--~~~~~~~-----------~~~~~~~-~-----------------~~~  230 (259)
T cd05037         182 SLTIAADKWSFGTTLLEICSNGEEPLSTLSS--SEKERFY-----------QDQHRLP-M-----------------PDC  230 (259)
T ss_pred             CcchhhHHHHHHHHHHHHHhCCCCCcccCCc--hhHHHHH-----------hcCCCCC-C-----------------CCc
Confidence            57889999999999999999 4666643210  0000000           0000000 0                 111


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      ..+.+++..||..+|.+||++.++++.|
T Consensus       231 ~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         231 AELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             hHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            5678899999999999999999999876


No 225
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.13  E-value=6.5e-11  Score=82.37  Aligned_cols=27  Identities=19%  Similarity=0.299  Sum_probs=24.5

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++|||||||+++||++|+.||..
T Consensus       192 ~~~~~~DiwslG~il~el~~g~~pf~~  218 (343)
T cd07878         192 HYNQTVDIWSVGCIMAELLKGKALFPG  218 (343)
T ss_pred             cCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            578899999999999999999999863


No 226
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.13  E-value=5.4e-11  Score=80.27  Aligned_cols=99  Identities=12%  Similarity=0.060  Sum_probs=52.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---hhHhhcCchhhhHhhhccCCCCCccc---hhh
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---KIMEIVDPSILMELMANNCMIPEDRG---RAK   77 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~   77 (122)
                      .++.++||||||++++|+++|+.||..... ...+..........   ......+-......     .......   ...
T Consensus       178 ~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~  251 (287)
T cd07840         178 RYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEKIFELCGSPTDENWPGVSKLPWFENL-----KPKKPYKRRLREF  251 (287)
T ss_pred             cCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchhhccccccchhhhhc-----cccccchhHHHHH
Confidence            467899999999999999999999864221 11111111100000   00000000000000     0000000   000


Q ss_pred             HHH-HHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           78 TEE-CLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        78 ~~~-~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ... .+..+.+++..||..+|.+||++.+++.
T Consensus       252 ~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         252 FKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             hcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            011 2567889999999999999999999875


No 227
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.12  E-value=7.5e-11  Score=83.70  Aligned_cols=29  Identities=21%  Similarity=0.338  Sum_probs=25.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCcc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDAT   31 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~   31 (122)
                      ..++.++|||||||++|||++|+.||...
T Consensus       262 ~~~~~~~DvwslGvil~el~~g~~pf~~~  290 (392)
T PHA03207        262 DPYCAKTDIWSAGLVLFEMSVKNVTLFGK  290 (392)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence            45788999999999999999999998643


No 228
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.12  E-value=7.6e-11  Score=81.85  Aligned_cols=101  Identities=15%  Similarity=0.059  Sum_probs=53.1

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhcc----chhHhhcCchhhhHhhhccCCCCCccch--hh
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALP----EKIMEIVDPSILMELMANNCMIPEDRGR--AK   77 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~   77 (122)
                      .++.++|||||||+++|+++|+.||.....  ......+.....    .................   ........  ..
T Consensus       186 ~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~  260 (336)
T cd07849         186 GYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILGVLGTPSQEDLNCIISLRARNYIKS---LPFKPKVPWNKL  260 (336)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhh---cCcCCcccHHHH
Confidence            467889999999999999999999863210  000011100000    00101111000000000   00000000  00


Q ss_pred             HHHHHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           78 TEECLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        78 ~~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .......+.+++.+||+.+|.+||++.+++..
T Consensus       261 ~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         261 FPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             hcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            01224567899999999999999999998865


No 229
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.12  E-value=2e-11  Score=84.48  Aligned_cols=76  Identities=13%  Similarity=0.171  Sum_probs=50.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|+.||....     ...........      +..    .+               ....
T Consensus       170 ~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~~~~~~~~~~~------~~~----~p---------------~~~~  219 (323)
T cd05571         170 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILME------EIR----FP---------------RTLS  219 (323)
T ss_pred             CCCCccccCcccchhhhhhhcCCCCCCCCC-----HHHHHHHHHcC------CCC----CC---------------CCCC
Confidence            457889999999999999999999986321     11111000000      000    00               0234


Q ss_pred             HHHHHHhhhcCCCCcCCCC-----ChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERM-----EMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rp-----s~~~v~~  108 (122)
                      ..+.+++..|++.+|.+||     +..+++.
T Consensus       220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         220 PEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            4667889999999999999     7887764


No 230
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.12  E-value=4.6e-11  Score=82.23  Aligned_cols=71  Identities=17%  Similarity=0.215  Sum_probs=46.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|+.||...     ............        ..  ..+               ....
T Consensus       168 ~~~~~~~DvwslGvil~el~tg~~pf~~~-----~~~~~~~~~~~~--------~~--~~~---------------~~~~  217 (312)
T cd05585         168 HGYTKAVDWWTLGVLLYEMLTGLPPFYDE-----NVNEMYRKILQE--------PL--RFP---------------DGFD  217 (312)
T ss_pred             CCCCCccceechhHHHHHHHhCCCCcCCC-----CHHHHHHHHHcC--------CC--CCC---------------CcCC
Confidence            45788999999999999999999998631     111111111000        00  000               1234


Q ss_pred             HHHHHHhhhcCCCCcCCCCCh
Q 036557           83 NAIIKTGVLCSTESPFERMEM  103 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~  103 (122)
                      ..+.+++..||..+|.+||++
T Consensus       218 ~~~~~li~~~L~~dp~~R~~~  238 (312)
T cd05585         218 RDAKDLLIGLLSRDPTRRLGY  238 (312)
T ss_pred             HHHHHHHHHHcCCCHHHcCCC
Confidence            566788999999999999864


No 231
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.12  E-value=5.6e-11  Score=80.58  Aligned_cols=81  Identities=21%  Similarity=0.284  Sum_probs=50.4

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..++.++|||||||+++|+++|+.||....... .......        .......  ..+               ...
T Consensus       171 ~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~--------~~~~~~~--~~~---------------~~~  224 (280)
T cd05608         171 GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQ--------RILNDSV--TYP---------------DKF  224 (280)
T ss_pred             CCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHH--------hhcccCC--CCc---------------ccC
Confidence            3467889999999999999999999986321110 0000000        0000000  000               133


Q ss_pred             HHHHHHHhhhcCCCCcCCCC-----ChHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERM-----EMRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rp-----s~~~v~~  108 (122)
                      +..+.+++..|++.+|.+||     ++.+++.
T Consensus       225 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         225 SPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            45678899999999999999     5566654


No 232
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.11  E-value=5.9e-11  Score=81.04  Aligned_cols=26  Identities=27%  Similarity=0.483  Sum_probs=23.8

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCC
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTD   29 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~   29 (122)
                      .++.++|||||||+++|+++|+.||.
T Consensus       203 ~~~~~~Dv~slG~il~el~~g~~~~~  228 (311)
T cd07866         203 RYTTAVDIWGIGCVFAEMFTRRPILQ  228 (311)
T ss_pred             ccCchhHhHHHHHHHHHHHhCCCCCC
Confidence            46788999999999999999999986


No 233
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.11  E-value=5.6e-11  Score=91.00  Aligned_cols=76  Identities=22%  Similarity=0.331  Sum_probs=48.0

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..++.++|||||||+|+||+++..|+....   ..+....        ....++...                    ..
T Consensus       189 ~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~--------~~~~~~~~~--------------------~~  237 (793)
T PLN00181        189 GSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLR--------HRVLPPQIL--------------------LN  237 (793)
T ss_pred             cCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHH--------HhhcChhhh--------------------hc
Confidence            4568999999999999999999877764210   0000000        001111000                    11


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ......++..||+.+|.+||++.+++.
T Consensus       238 ~~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        238 WPKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             CHHHHHHHHHhCCCChhhCcChHHHhh
Confidence            123356778899999999999999975


No 234
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.10  E-value=7.7e-11  Score=79.67  Aligned_cols=99  Identities=13%  Similarity=0.112  Sum_probs=52.4

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhc--cchhHhhc--CchhhhHhhhccCCCCCccchh---
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMAL--PEKIMEIV--DPSILMELMANNCMIPEDRGRA---   76 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---   76 (122)
                      .++.++||||||++++++++|+.||..... ...+........  ........  ++.......     ........   
T Consensus       178 ~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~  251 (288)
T cd07833         178 NYGKPVDVWAIGCIMAELLDGEPLFPGDSD-IDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF-----PEPSQPESLER  251 (288)
T ss_pred             CcCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHhhhcccCcccccccc-----CCCCCcHHHHH
Confidence            567899999999999999999998863211 001111000000  00000000  000000000     00000000   


Q ss_pred             -hHHHHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           77 -KTEECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        77 -~~~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                       .....+..+.+++..||..+|++||++++++.
T Consensus       252 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         252 RYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             hcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence             00123567889999999999999999998874


No 235
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.10  E-value=2e-10  Score=80.50  Aligned_cols=28  Identities=14%  Similarity=0.117  Sum_probs=25.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||++|||++|+.||..
T Consensus       197 ~~~~~~~DiwSlG~il~el~tg~~pf~~  224 (359)
T cd07876         197 MGYKENVDIWSVGCIMGELVKGSVIFQG  224 (359)
T ss_pred             CCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence            4678899999999999999999999964


No 236
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.10  E-value=4.6e-11  Score=82.01  Aligned_cols=27  Identities=11%  Similarity=0.257  Sum_probs=24.5

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++|||||||+++||++|+.||..
T Consensus       192 ~~~~~~DiwSlG~il~el~tg~~~f~~  218 (317)
T cd07867         192 HYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             ccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence            478899999999999999999999864


No 237
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.10  E-value=1.3e-10  Score=77.75  Aligned_cols=81  Identities=17%  Similarity=0.231  Sum_probs=51.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||+|++++++++|..||......  ...........    ....+                   .......
T Consensus       183 ~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~----~~~~~-------------------~~~~~~~  237 (268)
T cd06630         183 EQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIFKIAS----ATTAP-------------------SIPEHLS  237 (268)
T ss_pred             CCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHHHHhc----cCCCC-------------------CCchhhC
Confidence            45678899999999999999999998532111  10111000000    00000                   0111345


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++..|+..+|++||++.+++.
T Consensus       238 ~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         238 PGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            67788999999999999999999874


No 238
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.10  E-value=1.2e-10  Score=81.18  Aligned_cols=104  Identities=12%  Similarity=0.093  Sum_probs=52.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhc--cchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMAL--PEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      .++.++|||||||+++|+++|+.||..... ...+........  .......+...........................
T Consensus       192 ~~~~~~DvwslGv~l~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (343)
T cd07851         192 HYNQTVDIWSVGCIMAELLTGKTLFPGSDH-IDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGA  270 (343)
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccC
Confidence            467899999999999999999999863211 001111100000  00000000000000000000000000000000122


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ...+.+++..|+..+|.+|||+.+++.
T Consensus       271 s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         271 NPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             CHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence            457789999999999999999999874


No 239
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.10  E-value=5.9e-11  Score=81.91  Aligned_cols=75  Identities=20%  Similarity=0.236  Sum_probs=48.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|+.||....     ..+........      .+.    .+               ....
T Consensus       171 ~~~~~~~DvwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~------~~~----~~---------------~~~~  220 (316)
T cd05592         171 QKYNESVDWWSFGVLLYEMLIGQSPFHGED-----EDELFDSILND------RPH----FP---------------RWIS  220 (316)
T ss_pred             CCCCCcccchhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcC------CCC----CC---------------CCCC
Confidence            457889999999999999999999986321     11111110000      000    00               0234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChH-HHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMR-GVV  107 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~-~v~  107 (122)
                      ..+.+++..||..+|.+||++. ++.
T Consensus       221 ~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         221 KEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             HHHHHHHHHHccCCHHHcCCChHHHH
Confidence            4567888999999999999875 443


No 240
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.10  E-value=1.7e-10  Score=75.59  Aligned_cols=80  Identities=15%  Similarity=0.091  Sum_probs=51.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||+++++++++..||....    ........         ..........             .....+
T Consensus       161 ~~~~~~~Di~slG~~l~~l~~~~~p~~~~~----~~~~~~~~---------~~~~~~~~~~-------------~~~~~~  214 (244)
T smart00220      161 KGYGKAVDVWSLGVILYELLTGKPPFPGDD----QLLELFKK---------IGKPKPPFPP-------------PEWKIS  214 (244)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHH---------HhccCCCCcc-------------ccccCC
Confidence            457789999999999999999999986321    11111110         0000000000             000144


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..++.+||..+|++||++.+++.
T Consensus       215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      215 PEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHHHHHccCCchhccCHHHHhh
Confidence            57788999999999999999999875


No 241
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.10  E-value=9.6e-11  Score=82.22  Aligned_cols=28  Identities=18%  Similarity=0.120  Sum_probs=25.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||+++||++|+.||..
T Consensus       200 ~~~~~~~DiwSlG~il~ell~g~~pf~~  227 (364)
T cd07875         200 MGYKENVDIWSVGCIMGEMIKGGVLFPG  227 (364)
T ss_pred             CCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence            4578899999999999999999999964


No 242
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.09  E-value=7.5e-11  Score=81.85  Aligned_cols=77  Identities=17%  Similarity=0.249  Sum_probs=47.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCC---CcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEG---LTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      ..++.++|||||||+++|+++|+.||.......   .....++...       ......  ..+               .
T Consensus       171 ~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------i~~~~~--~~p---------------~  226 (329)
T cd05618         171 EDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV-------ILEKQI--RIP---------------R  226 (329)
T ss_pred             CCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH-------HhcCCC--CCC---------------C
Confidence            457889999999999999999999996321111   1111111110       000000  000               1


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCCh
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEM  103 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~  103 (122)
                      .....+..++.+|++.+|.+||+.
T Consensus       227 ~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         227 SLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             CCCHHHHHHHHHHhcCCHHHcCCC
Confidence            233456789999999999999984


No 243
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.09  E-value=2.5e-10  Score=79.85  Aligned_cols=28  Identities=18%  Similarity=0.126  Sum_probs=25.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||++++|++|+.||..
T Consensus       192 ~~~~~~~DvwslG~~l~~l~~g~~pf~~  219 (353)
T cd07850         192 MGYKENVDIWSVGCIMGEMIRGTVLFPG  219 (353)
T ss_pred             CCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence            4578899999999999999999999863


No 244
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.09  E-value=7.2e-11  Score=80.34  Aligned_cols=103  Identities=13%  Similarity=-0.007  Sum_probs=52.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---hhHhhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---KIMEIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      ..++.++||||+||+++|+++|+.||...... ..+..........   ................  .............
T Consensus       179 ~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  255 (288)
T cd07871         179 TEYSTPIDMWGVGCILYEMATGRPMFPGSTVK-EELHLIFRLLGTPTEETWPGITSNEEFRSYLF--PQYRAQPLINHAP  255 (288)
T ss_pred             cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCChHHhhccccchhhhcccc--CccCCCchHHhCC
Confidence            35788999999999999999999998642211 1111111100000   0000000000000000  0000000000001


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .......+++.+|++.+|.+|||+.+++.
T Consensus       256 ~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         256 RLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             CCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            22345678999999999999999999874


No 245
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.09  E-value=1.9e-10  Score=78.34  Aligned_cols=103  Identities=12%  Similarity=0.011  Sum_probs=51.9

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCc-hhhhHhhhccCCCCCccchhhHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDP-SILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .++.++|||||||+++|+++|..+|..... ...+................+. ........  ................
T Consensus       179 ~~~~~~Dv~slG~il~e~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  255 (298)
T cd07841         179 HYGVGVDMWSVGCIFAELLLRVPFLPGDSD-IDQLGKIFEALGTPTEENWPGVTSLPDYVEF--KPFPPTPLKQIFPAAS  255 (298)
T ss_pred             CCCcHHHHHHHHHHHHHHHcCCccccCCcc-HHHHHHHHHHcCCCchhhhhhcccccccccc--cccCCcchhhhccccc
Confidence            467889999999999999999777653211 0011111100000000000000 00000000  0000000000011234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++..||..+|.+||++.+++..
T Consensus       256 ~~~~~li~~~l~~~P~~R~s~~e~l~~  282 (298)
T cd07841         256 DDALDLLQRLLTLNPNKRITARQALEH  282 (298)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            677899999999999999999999863


No 246
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.09  E-value=6.7e-11  Score=81.80  Aligned_cols=70  Identities=14%  Similarity=0.146  Sum_probs=45.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++|||++|+.||....     ...........      ...    .+               ...+
T Consensus       176 ~~~~~~~DiwslG~il~el~~G~~pf~~~~-----~~~~~~~i~~~------~~~----~p---------------~~~~  225 (324)
T cd05589         176 TSYTRAVDWWGLGVLIYEMLVGESPFPGDD-----EEEVFDSIVND------EVR----YP---------------RFLS  225 (324)
T ss_pred             CCCCcccchhhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhC------CCC----CC---------------CCCC
Confidence            457889999999999999999999986321     11111100000      000    00               0234


Q ss_pred             HHHHHHhhhcCCCCcCCCCC
Q 036557           83 NAIIKTGVLCSTESPFERME  102 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps  102 (122)
                      ..+.+++.+|++.+|.+||+
T Consensus       226 ~~~~~li~~~L~~dP~~R~~  245 (324)
T cd05589         226 REAISIMRRLLRRNPERRLG  245 (324)
T ss_pred             HHHHHHHHHHhhcCHhHcCC
Confidence            55678999999999999994


No 247
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.09  E-value=8.9e-11  Score=88.49  Aligned_cols=81  Identities=14%  Similarity=0.147  Sum_probs=52.0

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..++.++|||||||++||+++|+.||....     ...+....        +......  +            ......
T Consensus       554 ~~~~~~~~DiwSlG~il~ElltG~~pf~~~~-----~~~~~~~i--------l~~~~~~--p------------~~~~~~  606 (669)
T cd05610         554 GKPHGPAVDWWALGVCLFEFLTGIPPFNDET-----PQQVFQNI--------LNRDIPW--P------------EGEEKL  606 (669)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHH--------HhcCCCC--C------------cccccC
Confidence            3457889999999999999999999986321     11111111        0000000  0            000022


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ...+..++..||..+|.+||++.+++.+
T Consensus       607 ~~~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         607 SVNAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             CHHHHHHHHHHcccChhHCcCHHHHHhC
Confidence            3456778888999999999999999864


No 248
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.09  E-value=5.9e-11  Score=81.96  Aligned_cols=75  Identities=20%  Similarity=0.231  Sum_probs=48.9

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++||+++|+.||....     .........      ...+.    .+               ....
T Consensus       171 ~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~i~------~~~~~----~~---------------~~~~  220 (316)
T cd05619         171 QKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-----EEELFQSIR------MDNPC----YP---------------RWLT  220 (316)
T ss_pred             CCCCchhhhhhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHH------hCCCC----CC---------------ccCC
Confidence            467899999999999999999999986321     111111000      00000    00               0223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChH-HHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMR-GVV  107 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~-~v~  107 (122)
                      ..+.+++.+||+.+|.+||++. ++.
T Consensus       221 ~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         221 REAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             HHHHHHHHHHhccCHhhcCCChHHHH
Confidence            4567888999999999999997 554


No 249
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.09  E-value=9.2e-11  Score=79.52  Aligned_cols=79  Identities=14%  Similarity=0.159  Sum_probs=51.0

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++|||||||+++|+++|..||........  ......      .......+    +               ...+.
T Consensus       172 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~------~~~~~~~~----~---------------~~~~~  224 (279)
T cd05633         172 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRM------TLTVNVEL----P---------------DSFSP  224 (279)
T ss_pred             CCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHHHHH------hhcCCcCC----c---------------cccCH
Confidence            478899999999999999999999864322111  110000      00000000    0               13345


Q ss_pred             HHHHHhhhcCCCCcCCCC-----ChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERM-----EMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rp-----s~~~v~~~  109 (122)
                      .+.+++..|+..+|.+||     ++++++++
T Consensus       225 ~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         225 ELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            678888999999999999     58887654


No 250
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.08  E-value=1.4e-10  Score=79.73  Aligned_cols=78  Identities=14%  Similarity=0.181  Sum_probs=50.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||+++|++++|..||......    ..         .............               ....+
T Consensus       207 ~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~----~~---------~~~~~~~~~~~~~---------------~~~~~  258 (316)
T cd05574         207 DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRD----ET---------FSNILKKEVTFPG---------------SPPVS  258 (316)
T ss_pred             CCCCchHHHHHHHHHHHHHhhCCCCCCCCchH----HH---------HHHHhcCCccCCC---------------ccccC
Confidence            34678899999999999999999998632110    00         0111110000000               00245


Q ss_pred             HHHHHHhhhcCCCCcCCCCC----hHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERME----MRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps----~~~v~~  108 (122)
                      ..+.+++..||+.+|.+||+    +.+++.
T Consensus       259 ~~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         259 SSARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            67889999999999999999    666654


No 251
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.08  E-value=1.2e-10  Score=80.77  Aligned_cols=105  Identities=11%  Similarity=0.072  Sum_probs=53.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhc--cchhH-hhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMAL--PEKIM-EIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      ..++.++||||||++++|+++|+.||..... ...+..+.....  ..... ...+.. ............+........
T Consensus       181 ~~~~~~~Dv~slG~il~el~tg~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  258 (328)
T cd07856         181 QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH-VNQFSIITDLLGTPPDDVINTICSEN-TLRFVQSLPKREPVPFSEKFK  258 (328)
T ss_pred             CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhccchh-hHHHHhhccccCCCcHHHHcC
Confidence            3578899999999999999999999863211 000000000000  00000 000000 000000000000000000001


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+..+.+++.+|++.+|.+||++.+++..
T Consensus       259 ~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         259 NADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             CCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            234677899999999999999999998754


No 252
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.08  E-value=1.6e-10  Score=80.73  Aligned_cols=28  Identities=18%  Similarity=0.164  Sum_probs=25.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||+++||++|+.||..
T Consensus       193 ~~~~~~~DiwslG~il~el~~g~~pf~~  220 (355)
T cd07874         193 MGYKENVDIWSVGCIMGEMVRHKILFPG  220 (355)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            4578899999999999999999999863


No 253
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.08  E-value=5.8e-11  Score=82.01  Aligned_cols=76  Identities=16%  Similarity=0.196  Sum_probs=49.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++|||++|+.||....     ............   ..       .+               ....
T Consensus       171 ~~~~~~~DvwslG~il~el~tg~~Pf~~~~-----~~~~~~~i~~~~---~~-------~p---------------~~~~  220 (321)
T cd05591         171 LEYGPSVDWWALGVLMYEMMAGQPPFEADN-----EDDLFESILHDD---VL-------YP---------------VWLS  220 (321)
T ss_pred             CCCCCccceechhHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCC---CC-------CC---------------CCCC
Confidence            457889999999999999999999996321     111111100000   00       00               0223


Q ss_pred             HHHHHHhhhcCCCCcCCCC-------ChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERM-------EMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rp-------s~~~v~~  108 (122)
                      ..+.+++..|++.+|.+|+       ++.+++.
T Consensus       221 ~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         221 KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            4667889999999999999       6666653


No 254
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.08  E-value=6.6e-11  Score=84.07  Aligned_cols=79  Identities=13%  Similarity=0.053  Sum_probs=56.0

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +-+|+.|+||||+||+++|+++-+++|...     ++...+.+            .......            ..+...
T Consensus       180 d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-----~m~~Li~k------------i~~~~~~------------Plp~~y  230 (426)
T KOG0589|consen  180 DIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-----NMSELILK------------INRGLYS------------PLPSMY  230 (426)
T ss_pred             CCCCCccCcchhhcchHHHHHhcccccCcc-----chHHHHHH------------HhhccCC------------CCCccc
Confidence            457999999999999999999999999732     11111111            1111100            111255


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..++..++..|+..+|..||++.+++.+
T Consensus       231 s~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  231 SSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             cHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            6678889999999999999999999876


No 255
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.08  E-value=1.3e-10  Score=80.96  Aligned_cols=27  Identities=15%  Similarity=0.236  Sum_probs=24.3

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++|||||||+++|+++|+.||..
T Consensus       195 ~~~~~~DiwSlGvil~el~~g~~pf~~  221 (342)
T cd07854         195 NYTKAIDMWAAGCIFAEMLTGKPLFAG  221 (342)
T ss_pred             ccCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            467889999999999999999999963


No 256
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.08  E-value=1.2e-10  Score=77.58  Aligned_cols=84  Identities=15%  Similarity=0.225  Sum_probs=52.5

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..++.++||||+|+++++|++|..||....  ..........        ...........             .....
T Consensus       173 ~~~~~~~~Di~slG~il~~l~~~~~p~~~~~--~~~~~~~~~~--------~~~~~~~~~~~-------------~~~~~  229 (260)
T PF00069_consen  173 GKKYTRKSDIWSLGIILYELLTGKLPFEESN--SDDQLEIIEK--------ILKRPLPSSSQ-------------QSREK  229 (260)
T ss_dssp             TSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS--HHHHHHHHHH--------HHHTHHHHHTT-------------SHTTS
T ss_pred             ccccccccccccccccccccccccccccccc--chhhhhhhhh--------ccccccccccc-------------ccchh
Confidence            4568899999999999999999999987420  0000011000        00000000000             00011


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ...+.+++..|++.+|.+||++.+++.
T Consensus       230 ~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  230 SEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             HHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            267889999999999999999999874


No 257
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.08  E-value=5.6e-11  Score=81.01  Aligned_cols=77  Identities=14%  Similarity=0.027  Sum_probs=49.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|+.||....     ............      ..    .+               ....
T Consensus       173 ~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~------~~----~~---------------~~~~  222 (291)
T cd05612         173 KGHNKAVDWWALGILIYEMLVGYPPFFDDN-----PFGIYEKILAGK------LE----FP---------------RHLD  222 (291)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC------cC----CC---------------ccCC
Confidence            346889999999999999999999986321     111111100000      00    00               0223


Q ss_pred             HHHHHHhhhcCCCCcCCCCC-----hHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERME-----MRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps-----~~~v~~~  109 (122)
                      ..+.+++.+|+..+|.+||+     +.+++..
T Consensus       223 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h  254 (291)
T cd05612         223 LYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH  254 (291)
T ss_pred             HHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence            45678999999999999995     7777643


No 258
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.08  E-value=6.7e-11  Score=80.37  Aligned_cols=81  Identities=15%  Similarity=0.197  Sum_probs=49.6

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..++.++||||||++++|+++|..||.....  ......+..    ..... ....    .               ...
T Consensus       175 ~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~--~~~~~~~~~----~~~~~-~~~~----~---------------~~~  228 (285)
T cd05632         175 NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE--KVKREEVDR----RVLET-EEVY----S---------------AKF  228 (285)
T ss_pred             CCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHH----hhhcc-cccc----C---------------ccC
Confidence            35578899999999999999999999863210  000000000    00000 0000    0               023


Q ss_pred             HHHHHHHhhhcCCCCcCCCCC-----hHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERME-----MRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps-----~~~v~~  108 (122)
                      +..+.+++..||+.+|.+||+     +.+++.
T Consensus       229 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         229 SEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             CHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            445678899999999999999     555554


No 259
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.08  E-value=2.4e-10  Score=76.60  Aligned_cols=77  Identities=10%  Similarity=0.048  Sum_probs=47.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||+++||+++|+.||....    ..... ......    ...+.                   .+....
T Consensus       184 ~~~~~~~Dv~slG~il~el~~g~~p~~~~~----~~~~~-~~~~~~----~~~~~-------------------~~~~~~  235 (265)
T cd06652         184 EGYGRKADIWSVGCTVVEMLTEKPPWAEFE----AMAAI-FKIATQ----PTNPV-------------------LPPHVS  235 (265)
T ss_pred             CCCCcchhHHHHHHHHHHHhhCCCCCCccc----hHHHH-HHHhcC----CCCCC-------------------CchhhC
Confidence            356788999999999999999999986311    11111 000000    00000                   001333


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..++.+||. +|.+||++.+|+.
T Consensus       236 ~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         236 DHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             HHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            455677778884 8999999999875


No 260
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.07  E-value=3.4e-10  Score=76.27  Aligned_cols=100  Identities=11%  Similarity=0.013  Sum_probs=51.8

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---hhHhhcCch-hhhHhhhccCCCCCccchhhHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---KIMEIVDPS-ILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      .++.++||||||++++|+++|+.||..... ...+..........   ......+-. ......    ............
T Consensus       175 ~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~  249 (282)
T cd07829         175 HYSTAVDIWSVGCIFAEMITGKPLFPGDSE-IDQLFKIFQILGTPTEESWPGVTKLPDYKPTFP----KFPPKDLEKVLP  249 (282)
T ss_pred             CCCccccHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHHHhCCCcHHHHHhhccccccccccc----ccCccchHHhcc
Confidence            577899999999999999999888853210 00000110000000   000000000 000000    000000000001


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .....+.+++..||..+|.+||++.+++.
T Consensus       250 ~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         250 RLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             cccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            22456889999999999999999999875


No 261
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.07  E-value=1.6e-10  Score=79.82  Aligned_cols=109  Identities=11%  Similarity=0.044  Sum_probs=55.0

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc--hhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE--KIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      .++.++||||||++++++++|+.||...... ..+..........  .................................
T Consensus       183 ~~~~~sDi~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (330)
T cd07834         183 RYTKAIDIWSVGCIFAELLTRKPLFPGRDYI-DQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGA  261 (330)
T ss_pred             CCCcchhHHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccC
Confidence            5778899999999999999999998643210 0000000000000  000000000000000000000000000000123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHH--HHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAK--LCHT  113 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~--l~~i  113 (122)
                      +..+.+++..||+.+|++||++.+++..  ++.+
T Consensus       262 ~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         262 SPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence            4567899999999999999999999864  4444


No 262
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.07  E-value=8.2e-11  Score=81.22  Aligned_cols=75  Identities=19%  Similarity=0.166  Sum_probs=48.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|+.||....     ........     .. ..+.               .+    ....
T Consensus       171 ~~~~~~~DiwslGvil~el~~g~~Pf~~~~-----~~~~~~~~-----~~-~~~~---------------~~----~~~~  220 (316)
T cd05620         171 LKYTFSVDWWSFGVLLYEMLIGQSPFHGDD-----EDELFESI-----RV-DTPH---------------YP----RWIT  220 (316)
T ss_pred             CCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHH-----Hh-CCCC---------------CC----CCCC
Confidence            467889999999999999999999996321     11111100     00 0000               00    0223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChH-HHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMR-GVV  107 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~-~v~  107 (122)
                      ..+.+++..|++.+|.+||++. ++.
T Consensus       221 ~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         221 KESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHHHHHHHccCCHHHcCCChHHHH
Confidence            4567888999999999999984 554


No 263
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.07  E-value=2.9e-11  Score=90.00  Aligned_cols=77  Identities=17%  Similarity=0.198  Sum_probs=54.4

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      |..++|||||||++.||.||++||.......               ..++.-++.+..+            +.+.....+
T Consensus       755 YG~aADIWS~GCT~vEMATGrPPF~Elgspq---------------AAMFkVGmyKvHP------------~iPeelsae  807 (1226)
T KOG4279|consen  755 YGKAADIWSFGCTMVEMATGRPPFVELGSPQ---------------AAMFKVGMYKVHP------------PIPEELSAE  807 (1226)
T ss_pred             CCchhhhhhccceeEeeccCCCCeeecCChh---------------HhhhhhcceecCC------------CCcHHHHHH
Confidence            7889999999999999999999997432111               1112222222222            222355667


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ...++++|+..+|..||++++++.
T Consensus       808 ak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  808 AKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHHcCCCcccCccHHHhcc
Confidence            778899999999999999999874


No 264
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.07  E-value=6.6e-11  Score=81.91  Aligned_cols=77  Identities=14%  Similarity=0.163  Sum_probs=50.2

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ++.++.++|||||||+++|+++|+.||....     ...........      ...+    +               ...
T Consensus       169 ~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-----~~~~~~~~~~~------~~~~----p---------------~~~  218 (323)
T cd05595         169 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFELILME------EIRF----P---------------RTL  218 (323)
T ss_pred             CCCCCchhchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcC------CCCC----C---------------CCC
Confidence            3467889999999999999999999986321     11111000000      0000    0               023


Q ss_pred             HHHHHHHhhhcCCCCcCCCC-----ChHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERM-----EMRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rp-----s~~~v~~  108 (122)
                      +..+.+++..||..+|.+|+     ++.+++.
T Consensus       219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         219 SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             CHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            45667889999999999998     7777764


No 265
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.07  E-value=6.1e-11  Score=82.25  Aligned_cols=76  Identities=12%  Similarity=0.032  Sum_probs=48.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++|||++|..||....     ...........        ..  ..+               ....
T Consensus       190 ~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~~~i~~~--------~~--~~p---------------~~~~  239 (329)
T PTZ00263        190 KGHGKAVDWWTMGVLLYEFIAGYPPFFDDT-----PFRIYEKILAG--------RL--KFP---------------NWFD  239 (329)
T ss_pred             CCCCCcceeechHHHHHHHHcCCCCCCCCC-----HHHHHHHHhcC--------Cc--CCC---------------CCCC
Confidence            457889999999999999999999986311     11111110000        00  000               0123


Q ss_pred             HHHHHHhhhcCCCCcCCCCC-----hHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERME-----MRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps-----~~~v~~  108 (122)
                      ..+.+++..||+.+|.+|++     +.+++.
T Consensus       240 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        240 GRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            45678899999999999987     566653


No 266
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.07  E-value=1.3e-10  Score=83.86  Aligned_cols=80  Identities=15%  Similarity=0.127  Sum_probs=53.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..|..|+||||+|++.+||+-|.+||..    +..+......      ..--.+.+..  +               ....
T Consensus       444 k~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAlyLI------a~ng~P~lk~--~---------------~klS  496 (550)
T KOG0578|consen  444 KPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRALYLI------ATNGTPKLKN--P---------------EKLS  496 (550)
T ss_pred             cccCccccchhhhhHHHHHhcCCCCccC----CChHHHHHHH------hhcCCCCcCC--c---------------cccC
Confidence            4588999999999999999999999973    1111111100      0000111111  0               1445


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.++..+|++.|+.+|+++.+++.+
T Consensus       497 ~~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  497 PELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            677888999999999999999999854


No 267
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.07  E-value=7.1e-11  Score=81.95  Aligned_cols=77  Identities=14%  Similarity=0.167  Sum_probs=50.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++|+++|+.||....     ...........      ...+    +               ....
T Consensus       170 ~~~~~~~DiwslGvil~elltG~~Pf~~~~-----~~~~~~~~~~~------~~~~----p---------------~~~~  219 (328)
T cd05593         170 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILME------DIKF----P---------------RTLS  219 (328)
T ss_pred             CCCCccCCccccchHHHHHhhCCCCCCCCC-----HHHHHHHhccC------CccC----C---------------CCCC
Confidence            457889999999999999999999986321     11111110000      0000    0               0233


Q ss_pred             HHHHHHhhhcCCCCcCCCC-----ChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERM-----EMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rp-----s~~~v~~~  109 (122)
                      ..+.+++..|+..+|.+|+     ++.++++.
T Consensus       220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  251 (328)
T cd05593         220 ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH  251 (328)
T ss_pred             HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence            4567888999999999997     78887753


No 268
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.07  E-value=5.8e-11  Score=83.57  Aligned_cols=104  Identities=12%  Similarity=0.076  Sum_probs=52.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhc--CchhhhHhhhccCCCCCccc--hhhHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIV--DPSILMELMANNCMIPEDRG--RAKTE   79 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--~~~~~   79 (122)
                      .++.++|||||||+++||++|+.||...... ..+................  .......... .....+...  .....
T Consensus       181 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  258 (372)
T cd07853         181 HYTSAVDIWSVGCIFAELLGRRILFQAQSPI-QQLDLITDLLGTPSLEAMRSACEGARAHILR-GPHKPPSLPVLYTLSS  258 (372)
T ss_pred             CCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCHHHHHHhhHHHHHHHHh-CCCCCCchHHhcccCC
Confidence            4688899999999999999999999642210 0111110000000000000  0000000000 000000000  00001


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .....+.+++.+|++.+|.+||++.+++..
T Consensus       259 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~h  288 (372)
T cd07853         259 QATHEAVHLLCRMLVFDPDKRISAADALAH  288 (372)
T ss_pred             CCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence            224567889999999999999999998753


No 269
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.07  E-value=2e-10  Score=78.25  Aligned_cols=101  Identities=15%  Similarity=0.038  Sum_probs=51.9

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccch----hHhhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEK----IMEIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      .++.++|||||||+++|+++|+.||.... ....+.. +.......    ..............  ..............
T Consensus       194 ~~~~~~Di~slG~~~~el~~g~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  269 (302)
T cd07864         194 RYGPAIDVWSCGCILGELFTKKPIFQANQ-ELAQLEL-ISRLCGSPCPAVWPDVIKLPYFNTMK--PKKQYRRRLREEFS  269 (302)
T ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHH-HHHHhCCCChhhcccccccccccccc--cccccccchhhhcC
Confidence            35788999999999999999999986321 1111111 11110000    00000000000000  00000000000001


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..+.+++..||+.+|.+||++.+++.
T Consensus       270 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         270 FIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            23567789999999999999999998874


No 270
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.07  E-value=8.3e-11  Score=81.30  Aligned_cols=71  Identities=18%  Similarity=0.193  Sum_probs=46.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++||+++|+.||....     ............   ..       .+               ....
T Consensus       171 ~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~~~~~~~i~~~~---~~-------~~---------------~~~~  220 (320)
T cd05590         171 MLYGPSVDWWAMGVLLYEMLCGHAPFEAEN-----EDDLFEAILNDE---VV-------YP---------------TWLS  220 (320)
T ss_pred             CCCCCccchhhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHhcCC---CC-------CC---------------CCCC
Confidence            457889999999999999999999996321     111111100000   00       00               0233


Q ss_pred             HHHHHHhhhcCCCCcCCCCCh
Q 036557           83 NAIIKTGVLCSTESPFERMEM  103 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~  103 (122)
                      ..+.+++..|++.+|.+||+.
T Consensus       221 ~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         221 QDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHHHHHHHcccCHHHCCCC
Confidence            456788899999999999998


No 271
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.06  E-value=2.1e-10  Score=78.34  Aligned_cols=79  Identities=18%  Similarity=0.162  Sum_probs=50.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||||++++|+++|..||....    . ......     ........... .                ...+
T Consensus       191 ~~~~~~~Dv~slGvil~el~tg~~p~~~~~----~-~~~~~~-----~~~~~~~~~~~-~----------------~~~~  243 (292)
T cd06657         191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEP----P-LKAMKM-----IRDNLPPKLKN-L----------------HKVS  243 (292)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCCCCCC----H-HHHHHH-----HHhhCCcccCC-c----------------ccCC
Confidence            456789999999999999999999985311    0 111100     00011111000 0                0223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++.+||..+|.+||++.+++.
T Consensus       244 ~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         244 PSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            45677889999999999999999886


No 272
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.06  E-value=1.5e-10  Score=79.55  Aligned_cols=27  Identities=11%  Similarity=0.257  Sum_probs=24.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++||||+||+++||++|+.||..
T Consensus       192 ~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         192 HYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             CcCchhhHHHHHHHHHHHHhCCCCccC
Confidence            478899999999999999999999864


No 273
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.06  E-value=1.5e-10  Score=80.37  Aligned_cols=28  Identities=29%  Similarity=0.598  Sum_probs=25.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||++||+++|+.||..
T Consensus       171 ~~~~~~~DiwslG~~l~el~~g~~Pf~~  198 (329)
T cd05588         171 EDYGFSVDWWALGVLMFEMMAGRSPFDI  198 (329)
T ss_pred             CCCCCccceechHHHHHHHHHCCCCccc
Confidence            4578899999999999999999999963


No 274
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.06  E-value=1.4e-10  Score=79.22  Aligned_cols=26  Identities=19%  Similarity=0.290  Sum_probs=23.5

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCc
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ++.++||||||++++|+++|+.||..
T Consensus       201 ~~~~~Di~slG~~l~el~t~~~~~~~  226 (310)
T cd07865         201 YGPPIDMWGAGCIMAEMWTRSPIMQG  226 (310)
T ss_pred             cCchhhhHHHHHHHHHHHhCCCCCCC
Confidence            57889999999999999999998863


No 275
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.06  E-value=1e-10  Score=79.98  Aligned_cols=108  Identities=12%  Similarity=-0.038  Sum_probs=54.7

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc----hhHhhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE----KIMEIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      .++.++|||||||+++||++|+.||......  ............    ................  .............
T Consensus       181 ~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  256 (301)
T cd07873         181 DYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEEFKSYNY--PKYRADCLHNHAP  256 (301)
T ss_pred             CCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCChhhchhhhcccccccccc--CccccccHHhhcC
Confidence            3677899999999999999999998643211  001110000000    0000000000000000  0000000000001


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH--HHHHhHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA--KLCHTRE  115 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~--~l~~i~~  115 (122)
                      ..+..+.+++.+|++.+|.+|||+.+++.  .+..+.+
T Consensus       257 ~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~~  294 (301)
T cd07873         257 RLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE  294 (301)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence            23446678999999999999999999985  3444433


No 276
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.06  E-value=1.6e-10  Score=80.15  Aligned_cols=84  Identities=12%  Similarity=0.008  Sum_probs=52.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcC-chhhhHhhhccCCCCCccchhhHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVD-PSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ..++.++|||||||+++||++|..||....     ..+.......  ....+. +.....                ....
T Consensus       173 ~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~--~~~~~~~~~~~~~----------------~~~~  229 (333)
T cd05600         173 KGYDFTVDYWSLGCMLYEFLCGFPPFSGST-----PNETWENLKY--WKETLQRPVYDDP----------------RFNL  229 (333)
T ss_pred             CCCCCccceecchHHHhhhhhCCCCCCCCC-----HHHHHHHHHh--ccccccCCCCCcc----------------cccc
Confidence            467899999999999999999999986321     1111100000  000000 000000                0023


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      +..+.+++..|+..+|..||++.+++..
T Consensus       230 s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         230 SDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             CHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            4566788899999999999999999854


No 277
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.06  E-value=3.4e-10  Score=81.82  Aligned_cols=91  Identities=24%  Similarity=0.290  Sum_probs=61.3

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCC--cHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGL--TLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .+.++||||||++++|+++++.||+.......  .+...+..    .....+.|.+...                 ....
T Consensus       135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~----~~~~~~rP~i~~~-----------------~e~~  193 (484)
T KOG1023|consen  135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK----GGSNPFRPSIELL-----------------NELP  193 (484)
T ss_pred             ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh----cCCCCcCcchhhh-----------------hhcc
Confidence            57889999999999999999999986433222  22222222    1111122221111                 0333


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      ..+..++..||.++|.+||++.++-..++.+...
T Consensus       194 ~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  194 PELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             hHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence            4678899999999999999999999888877654


No 278
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.05  E-value=2.8e-10  Score=75.92  Aligned_cols=77  Identities=13%  Similarity=0.113  Sum_probs=49.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||++++++++|..||......   .......        .... .....+               ...+.
T Consensus       175 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~--------~~~~-~~~~~~---------------~~~~~  227 (258)
T cd05578         175 GYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRA--------KQET-ADVLYP---------------ATWST  227 (258)
T ss_pred             CCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHH--------Hhcc-ccccCc---------------ccCcH
Confidence            3688999999999999999999998743211   1111110        0000 000000               13346


Q ss_pred             HHHHHhhhcCCCCcCCCCCh--HHHH
Q 036557           84 AIIKTGVLCSTESPFERMEM--RGVV  107 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~--~~v~  107 (122)
                      .+.+++.+||..+|.+||++  .+++
T Consensus       228 ~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         228 EAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HHHHHHHHHccCChhHcCCccHHHHh
Confidence            77889999999999999999  5544


No 279
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.05  E-value=9.4e-11  Score=81.10  Aligned_cols=76  Identities=17%  Similarity=0.138  Sum_probs=49.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|+.||....     .......        ......  ..+               ....
T Consensus       175 ~~~~~~~DiwslG~il~ell~G~~pf~~~~-----~~~~~~~--------~~~~~~--~~~---------------~~~~  224 (323)
T cd05584         175 SGHGKAVDWWSLGALMYDMLTGAPPFTAEN-----RKKTIDK--------ILKGKL--NLP---------------PYLT  224 (323)
T ss_pred             CCCCCcceecccHHHHHHHhcCCCCCCCCC-----HHHHHHH--------HHcCCC--CCC---------------CCCC
Confidence            346789999999999999999999986321     1111111        000000  000               0223


Q ss_pred             HHHHHHhhhcCCCCcCCCC-----ChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERM-----EMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rp-----s~~~v~~  108 (122)
                      ..+.+++.+||+.+|.+||     +..+++.
T Consensus       225 ~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         225 PEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            4567899999999999999     6777654


No 280
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.05  E-value=1.6e-10  Score=77.29  Aligned_cols=80  Identities=20%  Similarity=0.223  Sum_probs=50.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|+||||+++||+++|..||.....+   ......        ...........+               ...+
T Consensus       167 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~--------~~~~~~~~~~~~---------------~~~~  220 (262)
T cd05572         167 KGYDFSVDYWSLGILLYELLTGRPPFGEDDED---PMEIYN--------DILKGNGKLEFP---------------NYID  220 (262)
T ss_pred             CCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC---HHHHHH--------HHhccCCCCCCC---------------cccC
Confidence            35678899999999999999999998643211   111111        111000000000               0224


Q ss_pred             HHHHHHhhhcCCCCcCCCCC-----hHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERME-----MRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps-----~~~v~~  108 (122)
                      ..+..++..||+.+|++||+     +.++++
T Consensus       221 ~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         221 KAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             HHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            57789999999999999999     666554


No 281
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.05  E-value=2.3e-10  Score=77.33  Aligned_cols=100  Identities=17%  Similarity=0.070  Sum_probs=51.9

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---hhHhhcC-chhhhHhhhccCCCCCccchhhHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---KIMEIVD-PSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      .++.++||||||++++|+++|+.||...... .............   ....... +......+.    ...........
T Consensus       177 ~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  251 (284)
T cd07836         177 TYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGTPTESTWPGISQLPEYKPTFPR----YPPQDLQQLFP  251 (284)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhHHHHhcCchhcccccC----CChHHHHHHhh
Confidence            3578899999999999999999998643211 1111111100000   0000000 000000000    00000000001


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+..+.+++..|++.+|.+||++.+++.
T Consensus       252 ~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         252 HADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             hcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            23456788999999999999999999874


No 282
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.05  E-value=1.2e-10  Score=77.62  Aligned_cols=80  Identities=18%  Similarity=0.153  Sum_probs=50.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      ..+.++||||||++++|+++|..||....     ...........    ...      .+             .....+.
T Consensus       177 ~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~----~~~------~~-------------~~~~~~~  228 (265)
T cd05579         177 GHSKTVDWWSLGCILYEFLVGIPPFHGET-----PEEIFQNILNG----KIE------WP-------------EDVEVSD  228 (265)
T ss_pred             CCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcC----CcC------CC-------------ccccCCH
Confidence            36678999999999999999999986321     11111110000    000      00             0001245


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAKLC  111 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~l~  111 (122)
                      .+..++..||+.+|.+||++..+.+.|+
T Consensus       229 ~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         229 EAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             HHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            6788999999999999999955554443


No 283
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.05  E-value=2.2e-10  Score=77.96  Aligned_cols=99  Identities=14%  Similarity=0.048  Sum_probs=51.5

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcC-----chhhhHhhhccCCCCCccchhhH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVD-----PSILMELMANNCMIPEDRGRAKT   78 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~   78 (122)
                      .++.++||||||++++++++|+.||..... ...+.......... .....+     +......+    ...+.......
T Consensus       180 ~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  253 (294)
T PLN00009        180 HYSTPVDIWSVGCIFAEMVNQKPLFPGDSE-IDELFKIFRILGTP-NEETWPGVTSLPDYKSAFP----KWPPKDLATVV  253 (294)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCC-Chhhccccccchhhhhhcc----cCCCCCHHHhC
Confidence            467899999999999999999999864211 01111110000000 000000     00000000    00000000000


Q ss_pred             HHHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           79 EECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        79 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ......+.+++.+|++.+|.+||++.+++.
T Consensus       254 ~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        254 PTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             cCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            123445788999999999999999999885


No 284
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.05  E-value=1.3e-10  Score=78.92  Aligned_cols=27  Identities=19%  Similarity=0.324  Sum_probs=24.1

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++||||||++++|+++|+.||..
T Consensus       180 ~~~~~~Dv~slG~~l~~l~~g~~~f~~  206 (291)
T cd07870         180 DYSSALDIWGAGCIFIEMLQGQPAFPG  206 (291)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            367789999999999999999999864


No 285
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.04  E-value=1.7e-10  Score=78.49  Aligned_cols=26  Identities=19%  Similarity=0.321  Sum_probs=23.7

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCc
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ++.++||||||++++|+++|..||..
T Consensus       184 ~~~~~Di~slG~~l~~l~~g~~~f~~  209 (293)
T cd07843         184 YSTAIDMWSVGCIFAELLTKKPLFPG  209 (293)
T ss_pred             ccchhhHHHHHHHHHHHHhCCCCCCC
Confidence            57889999999999999999999863


No 286
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.04  E-value=1.8e-10  Score=77.78  Aligned_cols=28  Identities=7%  Similarity=-0.052  Sum_probs=24.6

Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ...+.+++.+|+..+|.+||++++++.+
T Consensus       255 ~~~~~~li~~~l~~~p~~R~~~~~~l~h  282 (286)
T cd07832         255 SPEALDLLKGLLVYDPSKRLSAAEALRH  282 (286)
T ss_pred             cHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence            4678899999999999999999998753


No 287
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.04  E-value=2.2e-10  Score=77.76  Aligned_cols=27  Identities=26%  Similarity=0.303  Sum_probs=24.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++||||||+++|||++|+.||..
T Consensus       180 ~~~~~~Dv~slG~il~~l~~g~~~~~~  206 (291)
T cd07844         180 EYSTSLDMWGVGCIFYEMATGRPLFPG  206 (291)
T ss_pred             ccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            467889999999999999999999863


No 288
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.04  E-value=2.8e-10  Score=79.81  Aligned_cols=26  Identities=8%  Similarity=-0.307  Sum_probs=22.4

Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .....++..||+.+|.+|||+.+++.
T Consensus       325 ~~~~~li~~mL~~dP~~Rpta~e~l~  350 (357)
T PHA03209        325 IDGEFLVHKMLTFDAAMRPSAEEILN  350 (357)
T ss_pred             chHHHHHHHHHcCCcccCcCHHHHhc
Confidence            34566899999999999999999875


No 289
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.03  E-value=1e-10  Score=80.91  Aligned_cols=71  Identities=18%  Similarity=0.245  Sum_probs=46.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++|||++|+.||....     .......        ......  ..+               ....
T Consensus       176 ~~~~~~~DiwSlGvil~elltg~~Pf~~~~-----~~~~~~~--------i~~~~~--~~p---------------~~~s  225 (323)
T cd05616         176 QPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQS--------IMEHNV--AYP---------------KSMS  225 (323)
T ss_pred             CCCCCccchhchhHHHHHHHhCCCCCCCCC-----HHHHHHH--------HHhCCC--CCC---------------CcCC
Confidence            467899999999999999999999996321     1111110        000000  000               0233


Q ss_pred             HHHHHHhhhcCCCCcCCCCCh
Q 036557           83 NAIIKTGVLCSTESPFERMEM  103 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~  103 (122)
                      ..+.+++.+|++.+|.+|++.
T Consensus       226 ~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         226 KEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHHHHHHHHHcccCHHhcCCC
Confidence            456788899999999999985


No 290
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.03  E-value=2.8e-10  Score=78.90  Aligned_cols=102  Identities=9%  Similarity=-0.024  Sum_probs=52.0

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhh-hHhhhccCCCCCccchhhHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSIL-MELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .++.++||||||++++|+++|..||.....  ......+................. ..... .....+...........
T Consensus       210 ~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  286 (335)
T PTZ00024        210 KYHFAVDMWSVGCIFAELLTGKPLFPGENE--IDQLGRIFELLGTPNEDNWPQAKKLPLYTE-FTPRKPKDLKTIFPNAS  286 (335)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCchhhCcchhhcccccc-cCcCCcccHHHhCcCCC
Confidence            367889999999999999999999864321  111111110000000000000000 00000 00000000000001234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++..|+..+|.+||++.+++.
T Consensus       287 ~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        287 DDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             hHHHHHHHHHcCCCchhccCHHHHhc
Confidence            56788999999999999999999885


No 291
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.03  E-value=1.2e-10  Score=80.48  Aligned_cols=71  Identities=20%  Similarity=0.257  Sum_probs=46.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++|||++|+.||....     .......        .....  ...+               ....
T Consensus       176 ~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~~~~~--------i~~~~--~~~~---------------~~~~  225 (324)
T cd05587         176 QPYGKSVDWWAFGVLLYEMLAGQPPFDGED-----EDELFQS--------IMEHN--VSYP---------------KSLS  225 (324)
T ss_pred             CCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHH--------HHcCC--CCCC---------------CCCC
Confidence            457889999999999999999999996321     1111110        00000  0000               0223


Q ss_pred             HHHHHHhhhcCCCCcCCCCCh
Q 036557           83 NAIIKTGVLCSTESPFERMEM  103 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~  103 (122)
                      ..+.+++.+|++.+|.+|++.
T Consensus       226 ~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         226 KEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHHHHHHHHHhhcCHHHcCCC
Confidence            456788899999999999976


No 292
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.03  E-value=2.6e-10  Score=78.13  Aligned_cols=28  Identities=11%  Similarity=0.223  Sum_probs=24.8

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCcc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDAT   31 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~   31 (122)
                      .++.++||||||++++|+++|+.||...
T Consensus       192 ~~~~~~Dv~slG~~l~~l~~~~~~~~~~  219 (316)
T cd07842         192 HYTKAIDIWAIGCIFAELLTLEPIFKGR  219 (316)
T ss_pred             CCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence            4678899999999999999999998644


No 293
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.03  E-value=1.3e-10  Score=84.92  Aligned_cols=75  Identities=20%  Similarity=0.148  Sum_probs=52.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..|+.++|+||+|++||+|++|+.||.....+    .+..         ..+...   ..               ....+
T Consensus       488 ~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei~---------~~i~~~---~~---------------s~~vS  536 (612)
T KOG0603|consen  488 QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEIH---------TRIQMP---KF---------------SECVS  536 (612)
T ss_pred             CCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHHH---------HhhcCC---cc---------------ccccC
Confidence            45899999999999999999999999753322    1111         111100   00               01444


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ....+|...|++.+|.+|+++.++..
T Consensus       537 ~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  537 DEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             HHHHHHHHHhccCChhhCcChhhhcc
Confidence            55677888999999999999998864


No 294
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.03  E-value=8.1e-11  Score=79.33  Aligned_cols=81  Identities=16%  Similarity=0.146  Sum_probs=55.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .+|+.++|||||||.++|+.||+-||..-..+...+...+.         -..+.+...                 ...+
T Consensus       269 ~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln---------~ePP~L~~~-----------------~gFS  322 (391)
T KOG0983|consen  269 PKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN---------EEPPLLPGH-----------------MGFS  322 (391)
T ss_pred             CccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh---------cCCCCCCcc-----------------cCcC
Confidence            35889999999999999999999999742222222222211         011111111                 0245


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.++...|++.|+.+||...++++.
T Consensus       323 p~F~~fv~~CL~kd~r~RP~Y~~Ll~h  349 (391)
T KOG0983|consen  323 PDFQSFVKDCLTKDHRKRPKYNKLLEH  349 (391)
T ss_pred             HHHHHHHHHHhhcCcccCcchHHHhcC
Confidence            678889999999999999999988753


No 295
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.02  E-value=1.4e-10  Score=80.40  Aligned_cols=78  Identities=18%  Similarity=0.196  Sum_probs=48.7

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      ++.++|||||||+++||++|..||....... ........     ... .++.+.                   ......
T Consensus       184 ~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~~~~~-----~~~-~~~~~~-------------------~~~~~~  237 (332)
T cd05614         184 HGKAVDWWSLGILIFELLTGASPFTLEGERN-TQSEVSRR-----ILK-CDPPFP-------------------SFIGPE  237 (332)
T ss_pred             CCCccccccchhhhhhhhcCCCCCCCCCCCC-CHHHHHHH-----Hhc-CCCCCC-------------------CCCCHH
Confidence            6788999999999999999999986322111 11111100     000 010000                   023345


Q ss_pred             HHHHhhhcCCCCcCCCC-----ChHHHHH
Q 036557           85 IIKTGVLCSTESPFERM-----EMRGVVA  108 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rp-----s~~~v~~  108 (122)
                      +.+++.+||+.+|.+||     ++.+++.
T Consensus       238 ~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         238 AQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             HHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            67889999999999999     6667654


No 296
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.02  E-value=2.4e-10  Score=79.20  Aligned_cols=78  Identities=18%  Similarity=0.271  Sum_probs=47.7

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCC-CCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNE-GLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      +..++.++|||||||+++||++|+.||...... ............       ......  .+               ..
T Consensus       170 ~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~-------~~~~~~--~p---------------~~  225 (327)
T cd05617         170 GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI-------LEKPIR--IP---------------RF  225 (327)
T ss_pred             CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH-------HhCCCC--CC---------------CC
Confidence            356788999999999999999999999643211 111111111100       000000  00               02


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCCh
Q 036557           81 CLNAIIKTGVLCSTESPFERMEM  103 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~  103 (122)
                      .+..+..++.+|+..+|.+|+++
T Consensus       226 ~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         226 LSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             CCHHHHHHHHHHhccCHHHcCCC
Confidence            23456788899999999999984


No 297
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.01  E-value=2.5e-10  Score=79.48  Aligned_cols=80  Identities=16%  Similarity=0.177  Sum_probs=50.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|+.||....     .........     ... ....  .+        ..     ...+
T Consensus       205 ~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~~i~-----~~~-~~~~--~p--------~~-----~~~~  258 (350)
T cd05573         205 TPYGLECDWWSLGVILYEMLYGFPPFYSDT-----LQETYNKII-----NWK-ESLR--FP--------PD-----PPVS  258 (350)
T ss_pred             CCCCCceeeEecchhhhhhccCCCCCCCCC-----HHHHHHHHh-----ccC-Cccc--CC--------CC-----CCCC
Confidence            457889999999999999999999996321     111111000     000 0000  00        00     0134


Q ss_pred             HHHHHHhhhcCCCCcCCCCC-hHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERME-MRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps-~~~v~~~  109 (122)
                      ..+..++..|+. +|.+||+ +.+++..
T Consensus       259 ~~~~~li~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         259 PEAIDLICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence            566788889997 9999999 9998764


No 298
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.01  E-value=2.4e-10  Score=78.40  Aligned_cols=102  Identities=11%  Similarity=0.053  Sum_probs=52.3

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---hhHhhcCc-hhhhHhhhccCCCCCccchhhHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---KIMEIVDP-SILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      .++.++||||+||++||+++|+.||....  .......+......   .....++. ........  .............
T Consensus       185 ~~~~~~DvwslG~il~el~~g~~~f~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  260 (309)
T cd07845         185 TYTTAIDMWAVGCILAELLAHKPLLPGKS--EIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTL--PKQPYNNLKHKFP  260 (309)
T ss_pred             CcCchHHHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCChhhchhhhcccccccccc--cCCCCCchHHhcc
Confidence            46789999999999999999999986321  11111111110000   00000000 00000000  0000000000001


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .....+.+++..|++.+|.+||++.+++..
T Consensus       261 ~~~~~~~~li~~ml~~dp~~R~t~~~il~h  290 (309)
T cd07845         261 WLSEAGLRLLNFLLMYDPKKRATAEEALES  290 (309)
T ss_pred             ccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence            124566789999999999999999998853


No 299
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.01  E-value=3.4e-10  Score=87.22  Aligned_cols=87  Identities=18%  Similarity=0.264  Sum_probs=55.4

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..++.++|||||||+++||++|+.||........     ..   ..   ....+.....                ....
T Consensus       205 g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki-----~~---~~---~i~~P~~~~p----------------~~~i  257 (932)
T PRK13184        205 GVPASESTDIYALGVILYQMLTLSFPYRRKKGRKI-----SY---RD---VILSPIEVAP----------------YREI  257 (932)
T ss_pred             CCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhh-----hh---hh---hccChhhccc----------------cccC
Confidence            34678899999999999999999999864211100     00   00   0000000000                0133


Q ss_pred             HHHHHHHhhhcCCCCcCCCC-ChHHHHHHHHHhHH
Q 036557           82 LNAIIKTGVLCSTESPFERM-EMRGVVAKLCHTRE  115 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rp-s~~~v~~~l~~i~~  115 (122)
                      +..+.+++.+|++.+|.+|+ ++.++...|+...+
T Consensus       258 P~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        258 PPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            45677889999999999995 56777777777655


No 300
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.01  E-value=1.8e-10  Score=78.11  Aligned_cols=83  Identities=16%  Similarity=0.142  Sum_probs=52.2

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      .+.++||||||++++|+++|..||.... ...........        ..... . ..+               ......
T Consensus       185 ~~~~~Dv~slG~il~el~tg~~p~~~~~-~~~~~~~~~~~--------~~~~~-~-~~~---------------~~~~~~  238 (288)
T cd05583         185 HDKAVDWWSLGVLTFELLTGASPFTVDG-EQNSQSEISRR--------ILKSK-P-PFP---------------KTMSAE  238 (288)
T ss_pred             CcchhhhHHHHHHHHHHHhCCCCcccCc-ccchHHHHHHH--------HHccC-C-CCC---------------cccCHH
Confidence            5678999999999999999999985321 11111111110        00000 0 000               123345


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHHHHHHh
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVAKLCHT  113 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~~l~~i  113 (122)
                      +.+++.+||+.+|++|||+.++...|+..
T Consensus       239 l~~li~~~l~~~p~~R~t~~~~~~~l~~~  267 (288)
T cd05583         239 ARDFIQKLLEKDPKKRLGANGADEIKNHP  267 (288)
T ss_pred             HHHHHHHHhcCCHhhccCcchHHHHhcCc
Confidence            67889999999999999998887766543


No 301
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.01  E-value=3.5e-10  Score=78.96  Aligned_cols=105  Identities=10%  Similarity=0.034  Sum_probs=52.9

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhc--cchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMAL--PEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      .++.++|||||||+++|+++|+.||..... ...+........  .......+...........-....+..........
T Consensus       194 ~~~~~~DvwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (345)
T cd07877         194 HYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGA  272 (345)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCC
Confidence            467899999999999999999999863211 111111111100  00111111100000000000000000000000012


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ...+.+++..|++.+|.+||++.+++..
T Consensus       273 ~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         273 NPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             CHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            3457889999999999999999998754


No 302
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.00  E-value=1.2e-10  Score=80.72  Aligned_cols=79  Identities=13%  Similarity=0.140  Sum_probs=48.9

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|+.||....     ...........  .....      .+           .  ....+
T Consensus       184 ~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~~~~~~~i~~~--~~~~~------~~-----------~--~~~~~  237 (330)
T cd05601         184 GTYGVECDWWSLGVIAYEMIYGRSPFHEGT-----SAKTYNNIMNF--QRFLK------FP-----------E--DPKVS  237 (330)
T ss_pred             CCCCCcceeecccceeeeeccCCCCCCCCC-----HHHHHHHHHcC--CCccC------CC-----------C--CCCCC
Confidence            457789999999999999999999986321     11111110000  00000      00           0  00233


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++..|++ +|.+||++.+++.
T Consensus       238 ~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         238 SDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             HHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            456778888997 9999999999874


No 303
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.00  E-value=5.5e-11  Score=81.98  Aligned_cols=73  Identities=18%  Similarity=0.203  Sum_probs=47.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|+.||....     .......        ......  ..+               ...+
T Consensus       173 ~~~~~~~DiwslG~il~el~tg~~p~~~~~-----~~~~~~~--------i~~~~~--~~p---------------~~~~  222 (318)
T cd05582         173 RGHTQSADWWSFGVLMFEMLTGSLPFQGKD-----RKETMTM--------ILKAKL--GMP---------------QFLS  222 (318)
T ss_pred             CCCCCccceeccceEeeeeccCCCCCCCCC-----HHHHHHH--------HHcCCC--CCC---------------CCCC
Confidence            356889999999999999999999986321     1111110        000000  000               0234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRG  105 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~  105 (122)
                      ..+..++..||+.+|.+||++.+
T Consensus       223 ~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         223 PEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHHHHHHHHhhcCHhHcCCCCC
Confidence            45678889999999999999544


No 304
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.00  E-value=5.5e-11  Score=82.28  Aligned_cols=78  Identities=13%  Similarity=0.160  Sum_probs=50.8

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..++.++|||||||+++||++|+.||....     ...........      ....    +               ...
T Consensus       170 ~~~~~~~~DiwslG~il~el~tG~~Pf~~~~-----~~~~~~~i~~~------~~~~----p---------------~~~  219 (325)
T cd05594         170 DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILME------EIRF----P---------------RTL  219 (325)
T ss_pred             cCCCCCccccccccceeeeeccCCCCCCCCC-----HHHHHHHHhcC------CCCC----C---------------CCC
Confidence            3467899999999999999999999986321     11111000000      0000    0               023


Q ss_pred             HHHHHHHhhhcCCCCcCCCC-----ChHHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERM-----EMRGVVAK  109 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rp-----s~~~v~~~  109 (122)
                      ...+.+++..|++.+|.+|+     ++.+++..
T Consensus       220 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h  252 (325)
T cd05594         220 SPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH  252 (325)
T ss_pred             CHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence            34567889999999999996     88887643


No 305
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.00  E-value=4.5e-10  Score=75.87  Aligned_cols=77  Identities=17%  Similarity=0.154  Sum_probs=46.9

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      +.++.++||||||++++++++|+.||....... ......         ...... ....+               ....
T Consensus       169 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~---------~~~~~~-~~~~~---------------~~~~  222 (277)
T cd05577         169 EVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELK---------RRTLEM-AVEYP---------------DKFS  222 (277)
T ss_pred             CCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHH---------hccccc-cccCC---------------ccCC
Confidence            457789999999999999999999986322110 000000         000000 00000               1234


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRG  105 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~  105 (122)
                      ..+.+++..||+.+|.+||++.+
T Consensus       223 ~~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         223 PEAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             HHHHHHHHHHccCChhHccCCCc
Confidence            56688899999999999994443


No 306
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.00  E-value=4.9e-10  Score=74.27  Aligned_cols=76  Identities=17%  Similarity=0.281  Sum_probs=49.8

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||+|++++++++|..|+....    ........ ...     ..+.    .+               ...+.
T Consensus       175 ~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~~~~~~~~-~~~-----~~~~----~~---------------~~~~~  225 (254)
T cd06627         175 GASTASDIWSLGCTVIELLTGNPPYYDLN----PMAALFRI-VQD-----DHPP----LP---------------EGISP  225 (254)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHH-hcc-----CCCC----CC---------------CCCCH
Confidence            35788999999999999999999986321    11111000 000     0000    00               12345


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+..++..|+..+|++||++.+++.
T Consensus       226 ~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         226 ELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHHHHHhCChhhCcCHHHHhc
Confidence            6788999999999999999999874


No 307
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.99  E-value=2.2e-10  Score=77.40  Aligned_cols=80  Identities=23%  Similarity=0.219  Sum_probs=57.1

Q ss_pred             CCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHHHH
Q 036557            7 MTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNAII   86 (122)
Q Consensus         7 ~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (122)
                      ..+|+|||++++||+.|+.-||....+-.             ...++.-.+++...++               .....+.
T Consensus       368 raadmwsfaillwel~trevpfadlspme-------------cgmkialeglrv~ipp---------------gis~hm~  419 (448)
T KOG0195|consen  368 RAADMWSFAILLWELNTREVPFADLSPME-------------CGMKIALEGLRVHIPP---------------GISRHMN  419 (448)
T ss_pred             hhhhHHHHHHHHHHhhccccccccCCchh-------------hhhhhhhccccccCCC---------------CccHHHH
Confidence            56899999999999999999997432110             0112222233333332               4555678


Q ss_pred             HHhhhcCCCCcCCCCChHHHHHHHHHhH
Q 036557           87 KTGVLCSTESPFERMEMRGVVAKLCHTR  114 (122)
Q Consensus        87 ~l~~~C~~~~p~~Rps~~~v~~~l~~i~  114 (122)
                      ++|.-|+.+||..||.|..++-.|+++.
T Consensus       420 klm~icmnedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  420 KLMNICMNEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             HHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence            8889999999999999999999998864


No 308
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.99  E-value=1.9e-10  Score=83.71  Aligned_cols=75  Identities=16%  Similarity=0.232  Sum_probs=50.4

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      .+..+||||.||+||-|+.|++||....     +-+....      .+..+-.+                   +.....+
T Consensus       195 HsfEvDiWSlGcvmYtLL~G~PPFetk~-----vkety~~------Ik~~~Y~~-------------------P~~ls~~  244 (592)
T KOG0575|consen  195 HSFEVDIWSLGCVMYTLLVGRPPFETKT-----VKETYNK------IKLNEYSM-------------------PSHLSAE  244 (592)
T ss_pred             CCCchhhhhhhhHHHhhhhCCCCcccch-----HHHHHHH------HHhcCccc-------------------ccccCHH
Confidence            5678999999999999999999997421     1111110      01111000                   0133445


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+|+...+..+|.+|||+.+|+..
T Consensus       245 A~dLI~~lL~~~P~~Rpsl~~vL~h  269 (592)
T KOG0575|consen  245 AKDLIRKLLRPNPSERPSLDEVLDH  269 (592)
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhcC
Confidence            5778889999999999999999854


No 309
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=98.98  E-value=1.2e-10  Score=80.51  Aligned_cols=74  Identities=15%  Similarity=0.069  Sum_probs=48.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|..||....     ..........    ....  ..                   ...+
T Consensus       171 ~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~----~~~~--~~-------------------~~~~  220 (325)
T cd05602         171 QPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEMYDNILN----KPLQ--LK-------------------PNIT  220 (325)
T ss_pred             CCCCCccccccccHHHHHHhcCCCCCCCCC-----HHHHHHHHHh----CCcC--CC-------------------CCCC
Confidence            457889999999999999999999986321     1111110000    0000  00                   0233


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGV  106 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v  106 (122)
                      ..+.+++..|++.+|.+|++..+.
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~~~  244 (325)
T cd05602         221 NSARHLLEGLLQKDRTKRLGAKDD  244 (325)
T ss_pred             HHHHHHHHHHcccCHHHCCCCCCC
Confidence            456788889999999999987643


No 310
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=98.98  E-value=1.1e-10  Score=80.63  Aligned_cols=72  Identities=14%  Similarity=0.062  Sum_probs=47.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|..||...     ...+........    ..  .+.                   ...+
T Consensus       171 ~~~~~~~DvwslG~il~ell~g~~pf~~~-----~~~~~~~~i~~~----~~--~~~-------------------~~~~  220 (323)
T cd05575         171 QPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DTAEMYDNILNK----PL--RLK-------------------PNIS  220 (323)
T ss_pred             CCCCccccccccchhhhhhhcCCCCCCCC-----CHHHHHHHHHcC----CC--CCC-------------------CCCC
Confidence            45788999999999999999999998632     111111110000    00  000                   0224


Q ss_pred             HHHHHHhhhcCCCCcCCCCChH
Q 036557           83 NAIIKTGVLCSTESPFERMEMR  104 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~  104 (122)
                      ..+.+++.+|++.+|.+||++.
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         221 VSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHHHHHHHHHhhcCHHhCCCCC
Confidence            4567888999999999999874


No 311
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=98.96  E-value=3e-10  Score=79.29  Aligned_cols=77  Identities=16%  Similarity=0.107  Sum_probs=49.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||++|||++|..||....    .. .....        ......  ..+               ...+
T Consensus       203 ~~~~~~~DiwSlGvil~ell~G~~Pf~~~~----~~-~~~~~--------i~~~~~--~~p---------------~~~~  252 (340)
T PTZ00426        203 VGHGKAADWWTLGIFIYEILVGCPPFYANE----PL-LIYQK--------ILEGII--YFP---------------KFLD  252 (340)
T ss_pred             CCCCccccccchhhHHHHHhcCCCCCCCCC----HH-HHHHH--------HhcCCC--CCC---------------CCCC
Confidence            457889999999999999999999996321    10 11000        000000  000               0223


Q ss_pred             HHHHHHhhhcCCCCcCCCC-----ChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERM-----EMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rp-----s~~~v~~~  109 (122)
                      ..+.+++.+|++.+|.+|+     ++.+++..
T Consensus       253 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h  284 (340)
T PTZ00426        253 NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH  284 (340)
T ss_pred             HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence            3457888999999999995     78887653


No 312
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=98.96  E-value=8.3e-10  Score=76.55  Aligned_cols=103  Identities=12%  Similarity=0.039  Sum_probs=51.7

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---hhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---KIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      .++.++||||||++++++++|..||...... ..+...+......   .......+.................. .....
T Consensus       186 ~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  263 (332)
T cd07857         186 SYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFE-SIFPN  263 (332)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchH-hhCCC
Confidence            4678899999999999999999998632110 0011111100000   00000000000000000000000000 00001


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ....+..++.+|++.+|.+||++.+++.
T Consensus       264 ~~~~~~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         264 ANPLALDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             CCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            2456788999999999999999999873


No 313
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=98.95  E-value=8.4e-10  Score=74.73  Aligned_cols=78  Identities=12%  Similarity=0.126  Sum_probs=50.3

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||++++|+++|+.||........  .....      ........+    +               ...+.
T Consensus       172 ~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~------~~~~~~~~~----~---------------~~~s~  224 (278)
T cd05606         172 AYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDR------MTLTMAVEL----P---------------DSFSP  224 (278)
T ss_pred             CCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHH------HhhccCCCC----C---------------CcCCH
Confidence            478899999999999999999999864311110  00000      000000000    0               02245


Q ss_pred             HHHHHhhhcCCCCcCCCC-----ChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERM-----EMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rp-----s~~~v~~  108 (122)
                      .+.+++.+|+..+|.+||     ++.++++
T Consensus       225 ~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         225 ELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            678888999999999999     8888874


No 314
>PHA03211 serine/threonine kinase US3; Provisional
Probab=98.95  E-value=1.4e-09  Score=78.91  Aligned_cols=27  Identities=7%  Similarity=-0.201  Sum_probs=23.5

Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++.+|+..||.+|||+.++++.
T Consensus       429 ~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        429 LDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             chHHHHHHHHcccChhhCcCHHHHhhC
Confidence            356788999999999999999999864


No 315
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.95  E-value=1.1e-09  Score=78.26  Aligned_cols=104  Identities=11%  Similarity=-0.027  Sum_probs=55.9

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCc---cchhhHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPED---RGRAKTE   79 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~   79 (122)
                      +.|+.+.|+|+|||+++|+.+.++-|.... +-.++.....-......... ... ......+|-+-++-   .-.....
T Consensus       185 ~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s-E~Dqi~KIc~VLGtP~~~~~-~eg-~~La~~mnf~~P~~~~~~l~~L~p  261 (538)
T KOG0661|consen  185 GYYSSPVDMWAVGCIMAELYSLRPLFPGAS-EIDQIYKICEVLGTPDKDSW-PEG-YNLASAMNFRFPQVKPSPLKDLLP  261 (538)
T ss_pred             cccCCchHHHHHHHHHHHHHHhcccCCCCc-HHHHHHHHHHHhCCCccccc-hhH-HHHHHHhccCCCcCCCCChHHhCc
Confidence            579999999999999999999998887422 11111111110000000000 000 00000000000000   0000111


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+..+...++.+|+.+||++|||+.+.+++
T Consensus       262 ~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  262 NASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             ccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            356678899999999999999999998764


No 316
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=98.94  E-value=1.4e-10  Score=80.30  Aligned_cols=73  Identities=15%  Similarity=0.133  Sum_probs=47.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|..||...     ..............  ...+                       ...
T Consensus       171 ~~~~~~~DvwslG~il~el~~G~~pf~~~-----~~~~~~~~~~~~~~--~~~~-----------------------~~~  220 (325)
T cd05604         171 QPYDNTVDWWCLGAVLYEMLYGLPPFYCR-----DVAEMYDNILHKPL--VLRP-----------------------GAS  220 (325)
T ss_pred             CCCCCcCccccccceehhhhcCCCCCCCC-----CHHHHHHHHHcCCc--cCCC-----------------------CCC
Confidence            45788999999999999999999998632     11111111100000  0000                       223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRG  105 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~  105 (122)
                      ..+.+++..|+..+|.+||++.+
T Consensus       221 ~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         221 LTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             HHHHHHHHHHhccCHHhcCCCCC
Confidence            45577888999999999998753


No 317
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=98.94  E-value=1.8e-09  Score=72.44  Aligned_cols=77  Identities=13%  Similarity=0.045  Sum_probs=48.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++|+++|+.||...    ... ..+.......    ..+    ..+               ....
T Consensus       184 ~~~~~~~Di~slG~il~~l~~g~~p~~~~----~~~-~~~~~~~~~~----~~~----~~p---------------~~~~  235 (264)
T cd06653         184 EGYGRKADVWSVACTVVEMLTEKPPWAEY----EAM-AAIFKIATQP----TKP----MLP---------------DGVS  235 (264)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCCCcc----CHH-HHHHHHHcCC----CCC----CCC---------------cccC
Confidence            34678899999999999999999998632    111 1110000000    000    001               1344


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.+++..||. ++..||+..+++.
T Consensus       236 ~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         236 DACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HHHHHHHHHHhc-CcccCccHHHHhc
Confidence            567888899998 5799999997764


No 318
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=98.93  E-value=1.6e-09  Score=73.98  Aligned_cols=103  Identities=11%  Similarity=0.050  Sum_probs=55.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhc--cchhHhhcCc--hhhhHhhhccCCCCCccchhhH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMAL--PEKIMEIVDP--SILMELMANNCMIPEDRGRAKT   78 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   78 (122)
                      ..|...+|||+.||++.||++|.+-|..... -..+..+.....  ..+...++..  ...+...+.-  ...+......
T Consensus       177 tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SD-iDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~--~~~epLe~k~  253 (396)
T KOG0593|consen  177 TQYGKPVDIWAIGCVFAELLTGEPLWPGRSD-IDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEP--EHPEPLERKY  253 (396)
T ss_pred             CcCCCcccchhhhHHHHHHhcCCcCCCCcch-HHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCC--CCccchhhhc
Confidence            4688999999999999999999988764321 111111111111  1111222211  0000000000  0000000111


Q ss_pred             HHHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           79 EECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        79 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .....-+++++..|++.||++|++.++++.
T Consensus       254 p~~s~~~ld~~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  254 PKISNVLLDLLKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             ccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence            133446789999999999999999999873


No 319
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=98.92  E-value=6.6e-10  Score=74.71  Aligned_cols=75  Identities=12%  Similarity=0.158  Sum_probs=49.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++||||||++++++++|+.||....    ... ...        ......  ...+               ...+.
T Consensus       198 ~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~-~~~--------~~~~~~--~~~~---------------~~~~~  247 (280)
T cd05581         198 PAGKSSDLWALGCIIYQMLTGKPPFRGSN----EYL-TFQ--------KILKLE--YSFP---------------PNFPP  247 (280)
T ss_pred             CCChhhhHHHHHHHHHHHHhCCCCCCCcc----HHH-HHH--------HHHhcC--CCCC---------------CccCH
Confidence            46778999999999999999999986321    000 000        000000  0000               02345


Q ss_pred             HHHHHhhhcCCCCcCCCCCh----HHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEM----RGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~----~~v~~  108 (122)
                      .+..++..||+.+|.+||++    .+++.
T Consensus       248 ~~~~li~~~l~~~p~~R~~~~~~~~~ll~  276 (280)
T cd05581         248 DAKDLIEKLLVLDPQDRLGVNEGYDELKA  276 (280)
T ss_pred             HHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence            67889999999999999999    66653


No 320
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=98.91  E-value=1.6e-09  Score=76.49  Aligned_cols=80  Identities=18%  Similarity=0.118  Sum_probs=49.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      .++.++|||||||+++||++|+.||....     .......        ..........+           .  ....+.
T Consensus       223 ~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~~--------i~~~~~~~~~~-----------~--~~~~s~  276 (370)
T cd05596         223 YYGRECDWWSVGVFLYEMLVGDTPFYADS-----LVGTYSK--------IMDHKNSLTFP-----------D--DIEISK  276 (370)
T ss_pred             CCCCceeeeehhHHHHHHHhCCCCcCCCC-----HHHHHHH--------HHcCCCcCCCC-----------C--cCCCCH
Confidence            47889999999999999999999996321     1111111        00000000000           0  002345


Q ss_pred             HHHHHhhhcCCCCcCC--CCChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFE--RMEMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~--Rps~~~v~~~  109 (122)
                      .+.+++..|+..+|..  |+++.+++..
T Consensus       277 ~~~~li~~~L~~~p~r~~R~s~~ell~h  304 (370)
T cd05596         277 QAKDLICAFLTDREVRLGRNGVDEIKSH  304 (370)
T ss_pred             HHHHHHHHHccChhhccCCCCHHHHhcC
Confidence            6677888999988887  9999998654


No 321
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=98.90  E-value=2e-09  Score=76.15  Aligned_cols=28  Identities=29%  Similarity=0.450  Sum_probs=25.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||+++||++|..||..
T Consensus       223 ~~~~~~~DiwSlG~il~elltG~~Pf~~  250 (381)
T cd05626         223 KGYTQLCDWWSVGVILFEMLVGQPPFLA  250 (381)
T ss_pred             CCCCCccceeehhhHHHHHHhCCCCCcC
Confidence            4578899999999999999999999963


No 322
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=98.90  E-value=8.9e-10  Score=73.01  Aligned_cols=72  Identities=21%  Similarity=0.190  Sum_probs=47.0

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      ..+.++|+||||++++|+++|..||.....     ......        ......  ..+               ...+.
T Consensus       169 ~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~--------~~~~~~--~~~---------------~~~~~  218 (250)
T cd05123         169 GYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEK--------ILKDPL--RFP---------------EFLSP  218 (250)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHH--------HhcCCC--CCC---------------CCCCH
Confidence            356789999999999999999999863211     111110        000000  000               02245


Q ss_pred             HHHHHhhhcCCCCcCCCCChHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRG  105 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~  105 (122)
                      .+.+++..||..+|++||++.+
T Consensus       219 ~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         219 EARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHHHHHHhcCCHhhCCCccc
Confidence            6688999999999999999943


No 323
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=98.90  E-value=5.2e-10  Score=74.13  Aligned_cols=68  Identities=18%  Similarity=0.135  Sum_probs=44.9

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++||||+|++++|+++|..|+......               ........    .+               ....
T Consensus       157 ~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~~~~~~~----~~---------------~~~~  202 (237)
T cd05576         157 SEETEACDWWSLGAILFELLTGKTLVECHPSG---------------INTHTTLN----IP---------------EWVS  202 (237)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------cccccccC----Cc---------------ccCC
Confidence            45678899999999999999998876421100               00000000    00               0233


Q ss_pred             HHHHHHhhhcCCCCcCCCCChH
Q 036557           83 NAIIKTGVLCSTESPFERMEMR  104 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~  104 (122)
                      ..+..++.+|++.+|++|+++.
T Consensus       203 ~~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         203 EEARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             HHHHHHHHHHccCCHHHhcCCC
Confidence            4567889999999999999973


No 324
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=98.90  E-value=7.5e-10  Score=76.66  Aligned_cols=71  Identities=18%  Similarity=0.256  Sum_probs=46.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|+.||....     .......        ......  ..+               ...+
T Consensus       176 ~~~~~~~DiwslGvil~elltG~~pf~~~~-----~~~~~~~--------i~~~~~--~~p---------------~~~~  225 (323)
T cd05615         176 QPYGKSVDWWAYGVLLYEMLAGQPPFDGED-----EDELFQS--------IMEHNV--SYP---------------KSLS  225 (323)
T ss_pred             CCCCCccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHH--------HHhCCC--CCC---------------ccCC
Confidence            457889999999999999999999986321     1111110        000000  000               0223


Q ss_pred             HHHHHHhhhcCCCCcCCCCCh
Q 036557           83 NAIIKTGVLCSTESPFERMEM  103 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~  103 (122)
                      ..+.+++.+|++.+|.+|++.
T Consensus       226 ~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         226 KEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHHHHHHHcccCHhhCCCC
Confidence            456788899999999999985


No 325
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=98.90  E-value=3.9e-10  Score=78.16  Aligned_cols=27  Identities=30%  Similarity=0.400  Sum_probs=24.4

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++|||||||+++||++|+.||..
T Consensus       173 ~~~~~~DvwslGvil~elltG~~Pf~~  199 (330)
T cd05586         173 GYTKHVDFWSLGVLVFEMCCGWSPFYA  199 (330)
T ss_pred             CCCCccceeccccEEEEeccCCCCCCC
Confidence            368899999999999999999999863


No 326
>PHA03210 serine/threonine kinase US3; Provisional
Probab=98.90  E-value=1.3e-09  Score=79.80  Aligned_cols=27  Identities=15%  Similarity=-0.193  Sum_probs=23.0

Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+++.+|++.||.+||++.+++.+
T Consensus       428 ~~~~~li~kmL~~DP~~Rpsa~elL~h  454 (501)
T PHA03210        428 ADFEYPLVKMLTFDWHLRPGAAELLAL  454 (501)
T ss_pred             hHHHHHHHHHhccCcccCcCHHHHhhC
Confidence            456677889999999999999999853


No 327
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=98.89  E-value=2.2e-10  Score=76.87  Aligned_cols=81  Identities=14%  Similarity=0.089  Sum_probs=55.1

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      |+.+|||||+|++|+|+.||.-||..+.    .+.+.+.+...+..+.+..+.                   ...+....
T Consensus       246 yDiRSDvWSLGITL~EvAtG~fPyr~w~----svfeql~~Vv~gdpp~l~~~~-------------------~~~~~s~~  302 (361)
T KOG1006|consen  246 YDIRSDVWSLGITLYEVATGNFPYRKWD----SVFEQLCQVVIGDPPILLFDK-------------------ECVHYSFS  302 (361)
T ss_pred             cchhhhhhhhcceEeeeecCCCCcchHH----HHHHHHHHHHcCCCCeecCcc-------------------cccccCHH
Confidence            7889999999999999999999997532    233333332222222211110                   01144567


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      +..++..|+..+.+.||...+++.
T Consensus       303 ~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  303 MVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             HHHHHHHHhhcccccCcchhhhhc
Confidence            788888999999999999998764


No 328
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=98.89  E-value=4.8e-10  Score=77.41  Aligned_cols=72  Identities=17%  Similarity=0.116  Sum_probs=46.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..++.++|||||||+++||++|..||...     ............        ..  ..+               ....
T Consensus       171 ~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~--------~~--~~~---------------~~~~  220 (321)
T cd05603         171 EPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DVSQMYDNILHK--------PL--QLP---------------GGKT  220 (321)
T ss_pred             CCCCCcCcccccchhhhhhhcCCCCCCCC-----CHHHHHHHHhcC--------CC--CCC---------------CCCC
Confidence            45788999999999999999999998632     111111110000        00  000               0223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChH
Q 036557           83 NAIIKTGVLCSTESPFERMEMR  104 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~  104 (122)
                      ..+.+++..|++.+|.+|++..
T Consensus       221 ~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         221 VAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHHHHHHHccCCHhhcCCCC
Confidence            4567889999999999998763


No 329
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=98.88  E-value=1.9e-09  Score=75.17  Aligned_cols=104  Identities=12%  Similarity=0.037  Sum_probs=51.8

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhcc--chhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALP--EKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      .++.++||||||++++++++|..||..... ...+.........  ......+................+..........
T Consensus       192 ~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (343)
T cd07880         192 HYTQTVDIWSVGCIMAEMLTGKPLFKGHDH-LDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNA  270 (343)
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCC
Confidence            467889999999999999999999863210 0001111000000  0000000000000000000000000000000123


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ...+.+++.+|++.+|.+||++.+++.
T Consensus       271 ~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         271 NPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             ChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            445788999999999999999999883


No 330
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=98.87  E-value=2.3e-09  Score=74.03  Aligned_cols=102  Identities=18%  Similarity=0.120  Sum_probs=55.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHH--HHhhcc---c-hhHhhcCchhhhHhhhccCCCCCccchh
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEF--AKMALP---E-KIMEIVDPSILMELMANNCMIPEDRGRA   76 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~--~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (122)
                      ..|+...||||.||++.||++|++-|...    ..+.+.  +....+   . ....+-...... ...+........-..
T Consensus       203 ~~Yt~aiDiWSvGCI~AEmL~gkplFpG~----d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~-yi~slp~~p~~~f~~  277 (359)
T KOG0660|consen  203 SEYTKAIDIWSVGCILAEMLTGKPLFPGK----DYVHQLQLILELLGTPSEEDLQKIRSEKARP-YIKSLPQIPKQPFSS  277 (359)
T ss_pred             ccccchhhhhhhhHHHHHHHcCCCCCCCC----chHHHHHHHHHhcCCCCHHHHHHhccHHHHH-HHHhCCCCCCCCHHH
Confidence            46899999999999999999999988732    222221  111111   0 111111111111 111011110110011


Q ss_pred             hHHHHHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           77 KTEECLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        77 ~~~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .-.......+++..+++..||.+|+|.++.++.
T Consensus       278 ~fp~a~p~AidLlekmL~fdP~kRita~eAL~h  310 (359)
T KOG0660|consen  278 IFPNANPLAIDLLEKMLVFDPKKRITAEEALAH  310 (359)
T ss_pred             HcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence            111334566788889999999999999987643


No 331
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=98.84  E-value=8.2e-10  Score=77.70  Aligned_cols=79  Identities=13%  Similarity=0.116  Sum_probs=52.8

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      +..++|+||+||+|+-+++|.+||...... ..+.+.+..   +            .+         ++.+..-.....+
T Consensus       358 ~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~-~sl~eQI~~---G------------~y---------~f~p~~w~~Isee  412 (475)
T KOG0615|consen  358 YPSKVDIWSLGCVLFVCLSGYPPFSEEYTD-PSLKEQILK---G------------RY---------AFGPLQWDRISEE  412 (475)
T ss_pred             ccchheeeeccceEEEEeccCCCcccccCC-ccHHHHHhc---C------------cc---------cccChhhhhhhHH
Confidence            346899999999999999999999743321 112222211   1            00         0111112255667


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+++.+++..||++||++.+++.
T Consensus       413 a~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  413 ALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             HHHHHHHhhEeCcccCcCHHHHhc
Confidence            788899999999999999999874


No 332
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=98.84  E-value=2.6e-09  Score=72.68  Aligned_cols=75  Identities=12%  Similarity=0.045  Sum_probs=47.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ...+.++||||||++++++++|..||....     .......        ......  ..+               ....
T Consensus       173 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~--------~~~~~~--~~~---------------~~~~  222 (290)
T cd05580         173 KGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PIQIYEK--------ILEGKV--RFP---------------SFFS  222 (290)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHH--------HhcCCc--cCC---------------ccCC
Confidence            346778999999999999999999986321     1111000        000000  000               0223


Q ss_pred             HHHHHHhhhcCCCCcCCCC-----ChHHHH
Q 036557           83 NAIIKTGVLCSTESPFERM-----EMRGVV  107 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rp-----s~~~v~  107 (122)
                      ..+.+++..||..+|.+|+     +..+++
T Consensus       223 ~~l~~li~~~l~~~p~~R~~~~~~~~~~l~  252 (290)
T cd05580         223 PDAKDLIRNLLQVDLTKRLGNLKNGVNDIK  252 (290)
T ss_pred             HHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence            4667888999999999998     666665


No 333
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=98.83  E-value=2.5e-09  Score=77.48  Aligned_cols=77  Identities=19%  Similarity=0.244  Sum_probs=50.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      +..+..+|+|+|||+||+|+.|++||...   . +..-+      +++.+ ++-....                   ..+
T Consensus       262 ~~~~~~sDiWAlGCilyQmlaG~PPFra~---N-eyliF------qkI~~-l~y~fp~-------------------~fp  311 (604)
T KOG0592|consen  262 SPAGPSSDLWALGCILYQMLAGQPPFRAA---N-EYLIF------QKIQA-LDYEFPE-------------------GFP  311 (604)
T ss_pred             CCCCcccchHHHHHHHHHHhcCCCCCccc---c-HHHHH------HHHHH-hcccCCC-------------------CCC
Confidence            45778999999999999999999999731   1 11000      00111 1111111                   223


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.+|..+.+..+|.+|.+..++.++
T Consensus       312 ~~a~dLv~KLLv~dp~~Rlt~~qIk~H  338 (604)
T KOG0592|consen  312 EDARDLIKKLLVRDPSDRLTSQQIKAH  338 (604)
T ss_pred             HHHHHHHHHHHccCccccccHHHHhhC
Confidence            455677778889999999999888764


No 334
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.81  E-value=6.1e-09  Score=77.09  Aligned_cols=78  Identities=14%  Similarity=0.185  Sum_probs=56.2

Q ss_pred             CCCCC-CCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            2 GSEAS-MTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         2 ~~~~s-~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      |.+|. .++||||-||||+.|++|+.||+     +.++...+.+...+.. ++-                        ..
T Consensus       185 G~pYdG~~sDVWSCGVILfALLtG~LPFd-----DdNir~LLlKV~~G~f-~MP------------------------s~  234 (786)
T KOG0588|consen  185 GRPYDGRPSDVWSCGVILFALLTGKLPFD-----DDNIRVLLLKVQRGVF-EMP------------------------SN  234 (786)
T ss_pred             CCCCCCCccccchhHHHHHHHHhCCCCCC-----CccHHHHHHHHHcCcc-cCC------------------------Cc
Confidence            34454 68999999999999999999997     4455555544433311 000                        03


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+.+..+|+.+++..||..|-|+.+|.++
T Consensus       235 Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  235 ISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             CCHHHHHHHHHHhccCccccccHHHHhhC
Confidence            34456788889999999999999999764


No 335
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=98.80  E-value=5.2e-09  Score=73.37  Aligned_cols=28  Identities=21%  Similarity=0.408  Sum_probs=25.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||+++||++|..||..
T Consensus       214 ~~~~~~~DiwSlG~il~el~~G~~Pf~~  241 (364)
T cd05599         214 TGYNKECDWWSLGVIMYEMLVGYPPFCS  241 (364)
T ss_pred             CCCCCeeeeecchhHHHHhhcCCCCCCC
Confidence            4578899999999999999999999963


No 336
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=98.80  E-value=3.8e-09  Score=71.72  Aligned_cols=78  Identities=17%  Similarity=0.197  Sum_probs=47.6

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      ++.++||||||++++|+++|..||.... ..............      ..+.    .+               ......
T Consensus       185 ~~~~~Dv~slG~~l~~ll~g~~p~~~~~-~~~~~~~~~~~~~~------~~~~----~~---------------~~~~~~  238 (290)
T cd05613         185 HDKAVDWWSMGVLMYELLTGASPFTVDG-EKNSQAEISRRILK------SEPP----YP---------------QEMSAL  238 (290)
T ss_pred             CCccccHHHHHHHHHHHhcCCCCCCcCC-ccccHHHHHHHhhc------cCCC----CC---------------ccCCHH
Confidence            5678999999999999999999985311 11111111110000      0000    00               123446


Q ss_pred             HHHHhhhcCCCCcCCCC-----ChHHHHH
Q 036557           85 IIKTGVLCSTESPFERM-----EMRGVVA  108 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rp-----s~~~v~~  108 (122)
                      +..++..||+.+|++||     +..+++.
T Consensus       239 ~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         239 AKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             HHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            67889999999999997     5666654


No 337
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=98.78  E-value=1.4e-08  Score=71.43  Aligned_cols=28  Identities=25%  Similarity=0.405  Sum_probs=25.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||+++||++|+.||..
T Consensus       211 ~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         211 TGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             CCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence            4578899999999999999999999963


No 338
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=98.78  E-value=7e-09  Score=72.03  Aligned_cols=27  Identities=22%  Similarity=0.343  Sum_probs=24.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCC
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTD   29 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~   29 (122)
                      +.++.++|||||||++|||++|+.||.
T Consensus       183 ~~~~~~~DvwSlGvil~ell~g~~Pf~  209 (332)
T cd05623         183 GKYGPECDWWSLGVCMYEMLYGETPFY  209 (332)
T ss_pred             CCCCCcCCEEeeHHHHHHHhcCCCCCC
Confidence            357889999999999999999999996


No 339
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=98.77  E-value=5.8e-09  Score=76.51  Aligned_cols=30  Identities=23%  Similarity=0.367  Sum_probs=26.6

Q ss_pred             CCCCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            1 MGSEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         1 ~~~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      +|.+|+.+.||||||||+.||++|.+-|..
T Consensus       361 LGlpY~~~IDmWSLGCIlAEL~tG~PLfpG  390 (586)
T KOG0667|consen  361 LGLPYDTAIDMWSLGCILAELFTGEPLFPG  390 (586)
T ss_pred             ccCCCCCccceeehhhhHHhHhcCccccCC
Confidence            578999999999999999999999766653


No 340
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=98.76  E-value=8.9e-09  Score=76.51  Aligned_cols=25  Identities=8%  Similarity=-0.120  Sum_probs=22.0

Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+++..|++.||.+|||+.+++++
T Consensus       426 ~~dLi~~mL~~dP~kR~ta~e~L~H  450 (566)
T PLN03225        426 GWELLKSMMRFKGRQRISAKAALAH  450 (566)
T ss_pred             HHHHHHHHccCCcccCCCHHHHhCC
Confidence            4578999999999999999999864


No 341
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.76  E-value=9.9e-09  Score=76.30  Aligned_cols=80  Identities=18%  Similarity=0.258  Sum_probs=52.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .+|+.++|||||||+|.||.-+.+|....    ..+...+ +     +.+.-.|.+.                 .+..-.
T Consensus       210 ~PYDykaDiWSlGITLIEMAqiEPPHhel----npMRVll-K-----iaKSePPTLl-----------------qPS~Ws  262 (1187)
T KOG0579|consen  210 QPYDYKADIWSLGITLIEMAQIEPPHHEL----NPMRVLL-K-----IAKSEPPTLL-----------------QPSHWS  262 (1187)
T ss_pred             CCchhhhhHHhhhhHHHHHhccCCCcccc----chHHHHH-H-----HhhcCCCccc-----------------Ccchhh
Confidence            46899999999999999999999986521    1111111 1     1111111111                 011445


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+.++...|+..+|..||+..+++.+
T Consensus       263 ~~F~DfLk~cL~Knp~~Rp~aaqll~H  289 (1187)
T KOG0579|consen  263 RSFSDFLKRCLVKNPRNRPPAAQLLKH  289 (1187)
T ss_pred             hHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence            567889999999999999999998753


No 342
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.75  E-value=8.8e-09  Score=75.54  Aligned_cols=79  Identities=18%  Similarity=0.173  Sum_probs=55.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..|+..+||||||+.++||+|+.=||.    +-.+..++.++...+.-+..+..                       -..
T Consensus       218 E~YnE~VDVYaFGMCmLEMvT~eYPYs----EC~n~AQIYKKV~SGiKP~sl~k-----------------------V~d  270 (632)
T KOG0584|consen  218 ENYNELVDVYAFGMCMLEMVTSEYPYS----ECTNPAQIYKKVTSGIKPAALSK-----------------------VKD  270 (632)
T ss_pred             hhcchhhhhhhhhHHHHHHHhccCChh----hhCCHHHHHHHHHcCCCHHHhhc-----------------------cCC
Confidence            468999999999999999999999986    34455555554444322222211                       111


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .++.+++.+|+.. ..+|+++.+++..
T Consensus       271 Pevr~fIekCl~~-~~~R~sa~eLL~d  296 (632)
T KOG0584|consen  271 PEVREFIEKCLAT-KSERLSAKELLKD  296 (632)
T ss_pred             HHHHHHHHHHhcC-chhccCHHHHhhC
Confidence            2456677799998 9999999998853


No 343
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=98.74  E-value=1.2e-08  Score=72.10  Aligned_cols=27  Identities=30%  Similarity=0.401  Sum_probs=24.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++|||||||+++||++|+.||..
T Consensus       223 ~~~~~~DiwSlGvilyell~G~~Pf~~  249 (371)
T cd05622         223 YYGRECDWWSVGVFLYEMLVGDTPFYA  249 (371)
T ss_pred             cCCCccceeehhHHHHHHHhCCCCCCC
Confidence            378899999999999999999999963


No 344
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=98.73  E-value=7.1e-09  Score=73.15  Aligned_cols=28  Identities=21%  Similarity=0.320  Sum_probs=25.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||+++||++|..||..
T Consensus       223 ~~~~~~~DiwSlGvil~elltG~~Pf~~  250 (377)
T cd05629         223 QGYGQECDWWSLGAIMFECLIGWPPFCS  250 (377)
T ss_pred             CCCCCceeeEecchhhhhhhcCCCCCCC
Confidence            4578999999999999999999999963


No 345
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=98.72  E-value=1.2e-08  Score=72.20  Aligned_cols=28  Identities=29%  Similarity=0.443  Sum_probs=25.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||+++||++|+.||..
T Consensus       223 ~~~~~~~DiwSlGvil~elltG~~Pf~~  250 (382)
T cd05625         223 TGYTQLCDWWSVGVILYEMLVGQPPFLA  250 (382)
T ss_pred             CCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence            4578899999999999999999999963


No 346
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=98.71  E-value=6.3e-09  Score=73.35  Aligned_cols=28  Identities=29%  Similarity=0.443  Sum_probs=25.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||+++||++|+.||..
T Consensus       219 ~~~~~~~DiwSlGvilyell~G~~Pf~~  246 (376)
T cd05598         219 TGYTQLCDWWSVGVILYEMLVGQPPFLA  246 (376)
T ss_pred             CCCCcceeeeeccceeeehhhCCCCCCC
Confidence            4578899999999999999999999963


No 347
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.68  E-value=1.6e-08  Score=71.63  Aligned_cols=73  Identities=15%  Similarity=0.142  Sum_probs=49.3

Q ss_pred             CC-CCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH-H
Q 036557            5 AS-MTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC-L   82 (122)
Q Consensus         5 ~s-~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   82 (122)
                      |+ .++||||+||+|+.|++|+-||+.     .......+....+  ...+..                       .. .
T Consensus       199 Y~g~~aDvWS~GViLy~ml~G~~PF~d-----~~~~~l~~ki~~~--~~~~p~-----------------------~~~S  248 (370)
T KOG0583|consen  199 YSGKAADVWSLGVILYVLLCGRLPFDD-----SNVPNLYRKIRKG--EFKIPS-----------------------YLLS  248 (370)
T ss_pred             cCCchhhhhhhHHHHHHHHhCCCCCCC-----ccHHHHHHHHhcC--CccCCC-----------------------CcCC
Confidence            44 789999999999999999999974     1211111110000  000000                       12 4


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVV  107 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~  107 (122)
                      .+...+..+|+..+|.+|+++.+++
T Consensus       249 ~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  249 PEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHh
Confidence            5567888899999999999999998


No 348
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=98.68  E-value=3.4e-08  Score=67.55  Aligned_cols=85  Identities=12%  Similarity=0.130  Sum_probs=62.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .+|+...|+||+||++|-|++|-+||+...+                  ..+.+++.....    ..+..++.++=.+.+
T Consensus       238 eKydkscdmwSlgVimYIlLCGyPPFYS~hg------------------~aispgMk~rI~----~gqy~FP~pEWs~VS  295 (400)
T KOG0604|consen  238 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHG------------------LAISPGMKRRIR----TGQYEFPEPEWSCVS  295 (400)
T ss_pred             hhcCCCCCccchhHHHHHhhcCCCcccccCC------------------ccCChhHHhHhh----ccCccCCChhHhHHH
Confidence            4688999999999999999999999984221                  223333333322    234446666666777


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      +..-++++..+..+|.+|.|+.+++..
T Consensus       296 e~aKdlIR~LLkt~PteRlTI~~~m~h  322 (400)
T KOG0604|consen  296 EAAKDLIRKLLKTEPTERLTIEEVMDH  322 (400)
T ss_pred             HHHHHHHHHHhcCCchhheeHHHhhcC
Confidence            777888888999999999999998753


No 349
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=98.68  E-value=3.1e-08  Score=68.86  Aligned_cols=26  Identities=23%  Similarity=0.341  Sum_probs=24.0

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCC
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTD   29 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~   29 (122)
                      .++.++|||||||++|||++|+.||.
T Consensus       184 ~~~~~~DiwslG~~l~el~~g~~Pf~  209 (331)
T cd05597         184 RYGPECDWWSLGVCMYEMLYGETPFY  209 (331)
T ss_pred             CCCCcceeehhhhHHHHHhhCCCCCC
Confidence            46789999999999999999999986


No 350
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=98.67  E-value=5.5e-09  Score=72.88  Aligned_cols=31  Identities=26%  Similarity=0.415  Sum_probs=26.7

Q ss_pred             CCCCCCCCccchhhhHHHHHHHhcccCCCcc
Q 036557            1 MGSEASMTGDVYSFGILLLEMFIRRRPTDAT   31 (122)
Q Consensus         1 ~~~~~s~~sDV~SfGv~l~el~t~~~p~~~~   31 (122)
                      +|.-.|.++||||+||||.|+.+|..-|.+-
T Consensus       282 LgLGwS~pCDvWSiGCIL~ElytG~~LFqtH  312 (415)
T KOG0671|consen  282 LGLGWSQPCDVWSIGCILVELYTGETLFQTH  312 (415)
T ss_pred             eccCcCCccCceeeeeEEEEeeccceecccC
Confidence            3556889999999999999999999888653


No 351
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=98.66  E-value=2.9e-08  Score=70.18  Aligned_cols=27  Identities=30%  Similarity=0.426  Sum_probs=24.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.++||||+||+++||++|+.||..
T Consensus       223 ~~~~~~DiwSlG~ilyell~G~~Pf~~  249 (370)
T cd05621         223 YYGRECDWWSVGVFLFEMLVGDTPFYA  249 (370)
T ss_pred             CCCcccCEEeehHHHHHHHhCCCCCCC
Confidence            378899999999999999999999963


No 352
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=98.62  E-value=2.4e-08  Score=73.25  Aligned_cols=77  Identities=17%  Similarity=0.298  Sum_probs=52.6

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      ++.|+..+|.||+||++||+.+|++||...     .+.+.++....+    .+.                     .+...
T Consensus       174 e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d----~v~---------------------~p~~~  223 (808)
T KOG0597|consen  174 EQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKD----PVK---------------------PPSTA  223 (808)
T ss_pred             CCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcC----CCC---------------------Ccccc
Confidence            467999999999999999999999999731     223332221111    000                     00133


Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ...+..+....+..||..|-+..+++.
T Consensus       224 S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  224 SSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             cHHHHHHHHHHhhcChhhcccHHHHhc
Confidence            445677777888999999999998864


No 353
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=98.61  E-value=3.8e-08  Score=68.39  Aligned_cols=27  Identities=22%  Similarity=0.343  Sum_probs=24.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCC
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTD   29 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~   29 (122)
                      +.++.++|||||||++|||++|+.||.
T Consensus       183 ~~~~~~~DiwSlGvil~ell~g~~Pf~  209 (331)
T cd05624         183 GKYGPECDWWSLGVCMYEMLYGETPFY  209 (331)
T ss_pred             CCCCCcccEEeeehhhhhhhhCCCCcc
Confidence            357889999999999999999999996


No 354
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.60  E-value=6.8e-09  Score=81.43  Aligned_cols=75  Identities=17%  Similarity=0.154  Sum_probs=48.7

Q ss_pred             CCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHHHH
Q 036557            7 MTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNAII   86 (122)
Q Consensus         7 ~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (122)
                      .+.||||+|||+.||+||++|+.....    -.+++..+..++.+.         .+               .....+-.
T Consensus      1420 ~A~DiWslGCVVlEM~tGkrPW~~~dn----e~aIMy~V~~gh~Pq---------~P---------------~~ls~~g~ 1471 (1509)
T KOG4645|consen 1420 GAADIWSLGCVVLEMATGKRPWAELDN----EWAIMYHVAAGHKPQ---------IP---------------ERLSSEGR 1471 (1509)
T ss_pred             cchhhhcccceEEEeecCCCchhhccc----hhHHHhHHhccCCCC---------Cc---------------hhhhHhHH
Confidence            468999999999999999999874322    122222211111111         11               12344557


Q ss_pred             HHhhhcCCCCcCCCCChHHHHHH
Q 036557           87 KTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        87 ~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      +++..|+..||..|-++.|+++.
T Consensus      1472 dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1472 DFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             HHHHHHHhcCchhhhHHHHHHHh
Confidence            78889999999999888777653


No 355
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.56  E-value=6.9e-08  Score=70.41  Aligned_cols=77  Identities=17%  Similarity=0.238  Sum_probs=51.9

Q ss_pred             CCCCC-CCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHH
Q 036557            2 GSEAS-MTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         2 ~~~~s-~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      |..|+ .++||||+|||||-+++|+.||...- +...+            ..+.|    .++             .++..
T Consensus       192 GDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN-DSETL------------TmImD----CKY-------------tvPsh  241 (864)
T KOG4717|consen  192 GDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN-DSETL------------TMIMD----CKY-------------TVPSH  241 (864)
T ss_pred             cCccCCcchhhhHHHHHHHHHHhCCCcccccc-chhhh------------hhhhc----ccc-------------cCchh
Confidence            34455 56999999999999999999996321 11111            11111    111             11225


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ...+..+|+..++..+|..|.+.+++..
T Consensus       242 vS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  242 VSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             hhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            5667788889999999999999998863


No 356
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=98.56  E-value=2.8e-08  Score=69.76  Aligned_cols=28  Identities=25%  Similarity=0.405  Sum_probs=25.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++.++|||||||+++||++|+.||..
T Consensus       211 ~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         211 TGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             CCCCCcceeccccceeeecccCCCCCCC
Confidence            4578899999999999999999999963


No 357
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.52  E-value=5.9e-08  Score=71.99  Aligned_cols=72  Identities=18%  Similarity=0.156  Sum_probs=50.1

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHH
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEEC   81 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (122)
                      +..|+..+|=|||||+||||+.|..||....                 -.++++..+.....         |+    ...
T Consensus       542 e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gdd-----------------Eee~FdsI~~d~~~---------yP----~~l  591 (694)
T KOG0694|consen  542 EQSYTRAVDWWGLGVLLYEMLVGESPFPGDD-----------------EEEVFDSIVNDEVR---------YP----RFL  591 (694)
T ss_pred             cCcccchhhHHHHHHHHHHHHcCCCCCCCCC-----------------HHHHHHHHhcCCCC---------CC----Ccc
Confidence            4679999999999999999999999997321                 11222222221111         11    145


Q ss_pred             HHHHHHHhhhcCCCCcCCCCCh
Q 036557           82 LNAIIKTGVLCSTESPFERMEM  103 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~  103 (122)
                      +.+...++.+.+..+|..|--+
T Consensus       592 s~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  592 SKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             cHHHHHHHHHHhccCcccccCC
Confidence            5677888889999999999765


No 358
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=98.49  E-value=1.7e-07  Score=73.51  Aligned_cols=74  Identities=20%  Similarity=0.215  Sum_probs=46.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhh---cCchhhhHhhhccCCCCCccchhhHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEI---VDPSILMELMANNCMIPEDRGRAKTEE   80 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (122)
                      +|+.|+|+||+|||++||+   -||.+    .+.-...+.....+.++..   .++.                       
T Consensus       794 ~Yn~KiDmYSLGIVlFEM~---yPF~T----sMERa~iL~~LR~g~iP~~~~f~~~~-----------------------  843 (1351)
T KOG1035|consen  794 KYNSKIDMYSLGIVLFEML---YPFGT----SMERASILTNLRKGSIPEPADFFDPE-----------------------  843 (1351)
T ss_pred             cccchhhhHHHHHHHHHHh---ccCCc----hHHHHHHHHhcccCCCCCCccccccc-----------------------
Confidence            6999999999999999998   44542    2222222222222222211   1111                       


Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                       ...-..++.+.++.||++|||+.+++.
T Consensus       844 -~~~e~slI~~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  844 -HPEEASLIRWLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             -chHHHHHHHHHhcCCCccCCCHHHHhh
Confidence             112245667788999999999999874


No 359
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=98.46  E-value=1.9e-07  Score=67.02  Aligned_cols=35  Identities=11%  Similarity=0.086  Sum_probs=28.9

Q ss_pred             HHHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           82 LNAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        82 ~~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      +.-+.+.+..||..|++.|-|+.-|.+.+..+...
T Consensus       472 ~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~  506 (534)
T KOG3653|consen  472 MAVLCETIEECWDHDAEARLTAGCVEERMAELMML  506 (534)
T ss_pred             HHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence            45567888899999999999999888887776543


No 360
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=98.45  E-value=8.9e-08  Score=69.34  Aligned_cols=29  Identities=24%  Similarity=0.400  Sum_probs=26.4

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      +..|+..+|-||+|||++|++.|-+||..
T Consensus       362 ~kgY~~~cDwWSLG~ImyEmLvGyPPF~s  390 (550)
T KOG0605|consen  362 GKGYGKECDWWSLGCIMYEMLVGYPPFCS  390 (550)
T ss_pred             cCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence            45689999999999999999999999974


No 361
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=98.44  E-value=1.7e-07  Score=65.10  Aligned_cols=101  Identities=14%  Similarity=0.036  Sum_probs=58.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---hhHhhcCchhhhHhhhccCCCCCccch-hhH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---KIMEIVDPSILMELMANNCMIPEDRGR-AKT   78 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   78 (122)
                      ..|+.+.||||.||++.||+-|++-|.... ...++..++......   .+..+......-..+    ......-. -..
T Consensus       201 ~~Yt~~IDiWSaGCV~aELl~g~plFpG~s-~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p----~ik~~~~~~~~~  275 (364)
T KOG0658|consen  201 TEYTTSIDIWSAGCVMAELLKGQPLFPGDS-SVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFP----QIKAHPWHKVFF  275 (364)
T ss_pred             cccCceeEEhhhhHHHHHHhcCCcccCCCC-HHHHHHHHHHHhCCCCHHHHhhcCcccccccCc----ccccccceeecc
Confidence            368999999999999999999999887532 223344443332222   111111100000000    00000000 011


Q ss_pred             HHHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           79 EECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        79 ~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ...+.+.++++.+++..+|.+|.+..+++.
T Consensus       276 ~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  276 KRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             cCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence            244567899999999999999999988874


No 362
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=98.43  E-value=6.3e-08  Score=63.24  Aligned_cols=40  Identities=30%  Similarity=0.361  Sum_probs=33.8

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAK   43 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~   43 (122)
                      -|+.||||||+|+.+.||.+++.||+.+......+.+.+.
T Consensus       228 gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  228 GYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             cceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence            5889999999999999999999999987766666555554


No 363
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=98.43  E-value=6e-08  Score=67.28  Aligned_cols=28  Identities=36%  Similarity=0.498  Sum_probs=26.1

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCC
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTD   29 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~   29 (122)
                      +..|+..+|-||+||+++||++|.+||.
T Consensus       199 ~~gy~~~vDWWsLGillYeML~G~pPF~  226 (357)
T KOG0598|consen  199 GKGYDKAVDWWSLGILLYEMLTGKPPFY  226 (357)
T ss_pred             cCCCCcccchHhHHHHHHHHhhCCCCCc
Confidence            4578999999999999999999999997


No 364
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.43  E-value=5.2e-07  Score=65.15  Aligned_cols=95  Identities=11%  Similarity=0.042  Sum_probs=61.1

Q ss_pred             CCCCCCCCccchhhhHHHHHHHhcccCCCccCC-----CCCcHHHHHHhhc--------cc-hhHhhcCch---------
Q 036557            1 MGSEASMTGDVYSFGILLLEMFIRRRPTDATFN-----EGLTLHEFAKMAL--------PE-KIMEIVDPS---------   57 (122)
Q Consensus         1 ~~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~-----~~~~~~~~~~~~~--------~~-~~~~~~~~~---------   57 (122)
                      +|..|+..+|||||+|+.+||+||---|+...+     +..++...+..+.        .+ ..+++++.+         
T Consensus       424 lGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~L  503 (590)
T KOG1290|consen  424 LGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRL  503 (590)
T ss_pred             ecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceeccccc
Confidence            467899999999999999999999876654332     2344444332111        11 222333221         


Q ss_pred             --------hhhHhhhccCCCCCccchhhHHHHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           58 --------ILMELMANNCMIPEDRGRAKTEECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        58 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                              +...+             ....+....+.+++..+++.+|..|||+.+.+.
T Consensus       504 K~WpL~~VL~eKY-------------~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~  549 (590)
T KOG1290|consen  504 KPWPLYEVLIEKY-------------EWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLK  549 (590)
T ss_pred             CCCcHHHHHHHHh-------------CCCHHHHHHHHHHHHHHHhcCccccccHHHHhc
Confidence                    11111             112355677889999999999999999999874


No 365
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.40  E-value=4.2e-07  Score=67.33  Aligned_cols=79  Identities=19%  Similarity=0.201  Sum_probs=52.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      |.|+-|+||||+||+..|+.-+++|+.+.     +....+.     ++..--.|.+.                  ..+-.
T Consensus       200 GqYdgkvDvWSLGITCIELAERkPPlFnM-----NAMSALY-----HIAQNesPtLq------------------s~eWS  251 (948)
T KOG0577|consen  200 GQYDGKVDVWSLGITCIELAERKPPLFNM-----NAMSALY-----HIAQNESPTLQ------------------SNEWS  251 (948)
T ss_pred             cccCCccceeeccchhhhhhhcCCCccCc-----hHHHHHH-----HHHhcCCCCCC------------------CchhH
Confidence            68999999999999999999999997521     1111100     01000011111                  01445


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..|..+...|++.-|.+|||..+++..
T Consensus       252 ~~F~~Fvd~CLqKipqeRptse~ll~H  278 (948)
T KOG0577|consen  252 DYFRNFVDSCLQKIPQERPTSEELLKH  278 (948)
T ss_pred             HHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence            567888899999999999999987653


No 366
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=98.39  E-value=1.4e-07  Score=64.04  Aligned_cols=80  Identities=9%  Similarity=0.075  Sum_probs=52.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      -|+..+|.|+.||+|+-++.|++||-..       .+.+          ++.-.+.+..         ++..+.=.+.+.
T Consensus       204 GYs~EVD~Wa~GVImyTLLaGcpPFwHR-------kQml----------MLR~ImeGky---------qF~speWadis~  257 (411)
T KOG0599|consen  204 GYSKEVDEWACGVIMYTLLAGCPPFWHR-------KQML----------MLRMIMEGKY---------QFRSPEWADISA  257 (411)
T ss_pred             CccchhhHHHHHHHHHHHHcCCCchhHH-------HHHH----------HHHHHHhccc---------ccCCcchhhccc
Confidence            3788999999999999999999998521       1111          1111111111         111111224455


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..-+++.+|++.||.+|-|.++++++
T Consensus       258 ~~KdLIsrlLqVdp~~Ritake~LaH  283 (411)
T KOG0599|consen  258 TVKDLISRLLQVDPTKRITAKEALAH  283 (411)
T ss_pred             cHHHHHHHHHeeCchhcccHHHHhcC
Confidence            66788889999999999999998854


No 367
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.35  E-value=5e-07  Score=65.32  Aligned_cols=102  Identities=15%  Similarity=0.071  Sum_probs=56.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHH---
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTE---   79 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   79 (122)
                      ..|+.+.|+||.||||.||+.|++.|.... +-.++..+.+.........+-...+.   ....-..+..+.+...+   
T Consensus       295 t~Yg~aVDlWS~GCIl~El~~gkPI~~G~t-EveQl~kIfklcGSP~e~~W~~~kLP---~~~~~kp~~~y~r~l~E~~~  370 (560)
T KOG0600|consen  295 TSYGTAVDLWSVGCILAELFLGKPILQGRT-EVEQLHKIFKLCGSPTEDYWPVSKLP---HATIFKPQQPYKRRLRETFK  370 (560)
T ss_pred             cccccceeehhhhHHHHHHHcCCCCcCCcc-HHHHHHHHHHHhCCCChhccccccCC---cccccCCCCcccchHHHHhc
Confidence            469999999999999999999999886422 12222322222111100000000000   00011112222222222   


Q ss_pred             HHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           80 ECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+...+.|+...+..||+.|.|+.+++.
T Consensus       371 ~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  371 DFPASALDLLEKLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             cCCHHHHHHHHHHhccCccccccHHHHhc
Confidence            23456778888889999999999988764


No 368
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.31  E-value=5.4e-07  Score=64.14  Aligned_cols=81  Identities=10%  Similarity=0.036  Sum_probs=53.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ..|+..+||||.|++++.|++|.+||...... ..+....    .... ...+                    ..-....
T Consensus       213 ~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~-~~~~~i~----~~~~-~f~~--------------------~~w~~is  266 (382)
T KOG0032|consen  213 RPYGDEVDVWSIGVILYILLSGVPPFWGETEF-EIFLAIL----RGDF-DFTS--------------------EPWDDIS  266 (382)
T ss_pred             CCCCcccchhHHHHHHHHHhhCCCCCcCCChh-HHHHHHH----cCCC-CCCC--------------------CCccccC
Confidence            57899999999999999999999999743211 1111110    0000 0000                    0111334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..+-++...++..+|..|+++.+++++
T Consensus       267 ~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  267 ESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             HHHHHHHHHhcccCcccCCCHHHHhcC
Confidence            556678889999999999999999874


No 369
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=98.31  E-value=1.8e-07  Score=67.27  Aligned_cols=77  Identities=14%  Similarity=0.193  Sum_probs=49.8

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      .+.+.||||+||+||-++.|+.||...+                 ..++.+........         ++  ...+....
T Consensus       296 ~g~a~DiWalGVTLYCllfG~~PF~~~~-----------------~~~l~~KIvn~pL~---------fP--~~pe~~e~  347 (576)
T KOG0585|consen  296 SGFALDIWALGVTLYCLLFGQLPFFDDF-----------------ELELFDKIVNDPLE---------FP--ENPEINED  347 (576)
T ss_pred             cchhhhhhhhhhhHHHhhhccCCcccch-----------------HHHHHHHHhcCccc---------CC--CcccccHH
Confidence            3578999999999999999999996311                 11111111111100         00  00033456


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      +.+|+++.+..||..|.+..+|..+
T Consensus       348 ~kDli~~lL~KdP~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  348 LKDLIKRLLEKDPEQRITLPDIKLH  372 (576)
T ss_pred             HHHHHHHHhhcChhheeehhhheec
Confidence            6778889999999999999988654


No 370
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=98.30  E-value=2.9e-07  Score=61.67  Aligned_cols=79  Identities=15%  Similarity=0.085  Sum_probs=49.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .+|+..+|||+-||+|+-++.|..||....  ...+-+.+.+..       .|  +               +...-....
T Consensus       187 dpy~kpvDiW~cGViLfiLL~G~~PF~~~~--~~rlye~I~~g~-------yd--~---------------~~~~w~~is  240 (355)
T KOG0033|consen  187 DPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYEQIKAGA-------YD--Y---------------PSPEWDTVT  240 (355)
T ss_pred             CCCCCcchhhhhhHHHHHHHhCCCCCCCcc--HHHHHHHHhccc-------cC--C---------------CCcccCcCC
Confidence            468999999999999999999999996311  111111111100       00  0               000111334


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVV  107 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~  107 (122)
                      ++...|..+++..||.+|.|..+.+
T Consensus       241 ~~Ak~LvrrML~~dP~kRIta~EAL  265 (355)
T KOG0033|consen  241 PEAKSLIRRMLTVNPKKRITADEAL  265 (355)
T ss_pred             HHHHHHHHHHhccChhhhccHHHHh
Confidence            4556778888999999999988764


No 371
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=98.28  E-value=1.1e-06  Score=59.22  Aligned_cols=98  Identities=10%  Similarity=0.051  Sum_probs=54.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---hhHh---hcCchhhhHhhhccCCCCCccchh
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---KIME---IVDPSILMELMANNCMIPEDRGRA   76 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~   76 (122)
                      ..|+..+|+||.||++.|++-+.+-|... .+-.++....+.....   ..++   +.|-.-....+        ..+..
T Consensus       177 r~Yg~~VDmWavGCI~AELllr~P~fpG~-sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P--------~~~~~  247 (318)
T KOG0659|consen  177 RQYGTGVDMWAVGCIFAELLLRVPFFPGD-SDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFP--------KPPLN  247 (318)
T ss_pred             hhcCCcchhhhHHHHHHHHHccCCCCCCC-chHHHHHHHHHHcCCCCcccCccccccccHHHHhcCC--------CCccc
Confidence            35889999999999999999876655421 1212222222222211   1111   11100000000        00000


Q ss_pred             -hHHHHHHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           77 -KTEECLNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        77 -~~~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                       .-..+.....+++...+..+|.+|.++++.+++
T Consensus       248 ~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~  281 (318)
T KOG0659|consen  248 NLFPAASSDALDLLSKMLTYNPKKRITASQALKH  281 (318)
T ss_pred             cccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence             112344566899999999999999999998753


No 372
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=98.22  E-value=1.1e-06  Score=60.71  Aligned_cols=99  Identities=15%  Similarity=0.092  Sum_probs=53.3

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccc---hhHhhc-CchhhhHhhhccCCCCCccchhhHH
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPE---KIMEIV-DPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      .|+...||||+||++.||++++.-|..... ...+....+.....   ..+... -+.......      ....+.....
T Consensus       197 ~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~------~~~~~~~l~~  269 (323)
T KOG0594|consen  197 SYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFP------KWPGPKDLSS  269 (323)
T ss_pred             cCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHHcCCCCccCCCCccccccccccCc------CCCCccchHH
Confidence            699999999999999999998888874322 11111111111111   000000 000000000      0000000001


Q ss_pred             HH---HHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           80 EC---LNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        80 ~~---~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..   .....++..+|++.+|..|.++...+.+
T Consensus       270 ~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  270 ILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             hccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            11   1367888999999999999999988764


No 373
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.22  E-value=9.9e-07  Score=58.65  Aligned_cols=77  Identities=17%  Similarity=0.237  Sum_probs=52.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ...+..+|+|++|++.+|.+.|.+||.....     .+.....   ...+...|                      ...+
T Consensus       197 ~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~-----~etYkrI---~k~~~~~p----------------------~~is  246 (281)
T KOG0580|consen  197 RGHDKFVDLWSLGVLCYEFLVGLPPFESQSH-----SETYKRI---RKVDLKFP----------------------STIS  246 (281)
T ss_pred             CCccchhhHHHHHHHHHHHHhcCCchhhhhh-----HHHHHHH---HHccccCC----------------------cccC
Confidence            3467889999999999999999999974220     0000000   00011111                      1444


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ....+++..|+..+|.+|.+..+++..
T Consensus       247 ~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  247 GGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             hhHHHHHHHHhccCccccccHHHHhhh
Confidence            566788889999999999999998864


No 374
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=98.22  E-value=1.4e-06  Score=61.63  Aligned_cols=29  Identities=24%  Similarity=0.490  Sum_probs=26.8

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++|+.|+|+||.|+++||+++|+.||+.
T Consensus       188 ~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a  216 (429)
T KOG0595|consen  188 SQQYDAKADLWSIGTILYQCLTGKPPFDA  216 (429)
T ss_pred             hccccchhhHHHHHHHHHHHHhCCCCccc
Confidence            46899999999999999999999999973


No 375
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=98.18  E-value=5.2e-07  Score=62.13  Aligned_cols=78  Identities=19%  Similarity=0.209  Sum_probs=52.5

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      |+.++||||+|+...||.-|++||....+              -.....+...-....             ..+..-+..
T Consensus       206 Y~~~ADIWSLGITaIEMAEG~PPYsDIHP--------------MRAIFMIPT~PPPTF-------------~KPE~WS~~  258 (502)
T KOG0574|consen  206 YDTKADIWSLGITAIEMAEGRPPYSDIHP--------------MRAIFMIPTKPPPTF-------------KKPEEWSSE  258 (502)
T ss_pred             cchhhhHhhhcchhhhhhcCCCCcccccc--------------cceeEeccCCCCCCC-------------CChHhhhhH
Confidence            77899999999999999999999963211              011111211100000             111244567


Q ss_pred             HHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           85 IIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      +.++.+.|+-..|.+|-|+.++++.
T Consensus       259 F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  259 FNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             HHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            8899999999999999999888654


No 376
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=98.16  E-value=3.5e-06  Score=58.58  Aligned_cols=28  Identities=18%  Similarity=0.298  Sum_probs=25.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..|++..|+||+|||+.|++++++-|..
T Consensus       253 ~tyst~iDMWSvGCI~aE~l~~kPlf~G  280 (419)
T KOG0663|consen  253 KTYSTAVDMWSVGCIFAELLTQKPLFPG  280 (419)
T ss_pred             cccCcchhhhhHHHHHHHHHhcCCCCCC
Confidence            3589999999999999999999888864


No 377
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=98.16  E-value=2.2e-06  Score=57.02  Aligned_cols=106  Identities=16%  Similarity=0.086  Sum_probs=58.1

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHh-------hcCchhhhHhhhccCCCCCccchh
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIME-------IVDPSILMELMANNCMIPEDRGRA   76 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~   76 (122)
                      .|+..-|+|||||++.+|+..+.||.....+..++.....-.....+..       .+++........-....-..+.+.
T Consensus       209 ~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~  288 (338)
T KOG0668|consen  209 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINS  288 (338)
T ss_pred             hccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCc
Confidence            3677889999999999999999998765544444544443322221111       122222110000000000001111


Q ss_pred             hHHHH-HHHHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           77 KTEEC-LNAIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        77 ~~~~~-~~~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      ..... ..+.+++....+..|-.+|+|+.+.++.
T Consensus       289 ~n~hl~~peaiDlldklLrYDHqeRlTakEam~H  322 (338)
T KOG0668|consen  289 ENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH  322 (338)
T ss_pred             cccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence            11111 2456777778888999999999988753


No 378
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=98.12  E-value=2.8e-06  Score=54.04  Aligned_cols=26  Identities=8%  Similarity=0.055  Sum_probs=21.7

Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+.+++..|+..+|++||++.++++.
T Consensus       189 ~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         189 ELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            34677788999999999999998764


No 379
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=98.04  E-value=1.3e-06  Score=63.04  Aligned_cols=27  Identities=26%  Similarity=0.487  Sum_probs=25.2

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      +++.|+||||.||++|..+.|+.||..
T Consensus       660 KIsnKVDVWSvGVIFyQClYGrKPFGh  686 (775)
T KOG1151|consen  660 KISNKVDVWSVGVIFYQCLYGRKPFGH  686 (775)
T ss_pred             ccccceeeEeeehhhhhhhccCCCCCC
Confidence            588999999999999999999999964


No 380
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.93  E-value=6.6e-06  Score=58.98  Aligned_cols=29  Identities=31%  Similarity=0.484  Sum_probs=26.4

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..+|+..+|=|||||+|+||+.|++||+.
T Consensus       524 YqPYgksvDWWa~GVLLyEmlaGQpPFdG  552 (683)
T KOG0696|consen  524 YQPYGKSVDWWAFGVLLYEMLAGQPPFDG  552 (683)
T ss_pred             ecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence            35788999999999999999999999974


No 381
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=97.93  E-value=4e-06  Score=61.43  Aligned_cols=32  Identities=19%  Similarity=0.240  Sum_probs=27.9

Q ss_pred             CCCCCCCCccchhhhHHHHHHHhcccCCCccC
Q 036557            1 MGSEASMTGDVYSFGILLLEMFIRRRPTDATF   32 (122)
Q Consensus         1 ~~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~   32 (122)
                      +|-.|+..-|+||.||.|||+.||+--|....
T Consensus       608 LG~~yd~~iD~WSvgctLYElYtGkIlFpG~T  639 (752)
T KOG0670|consen  608 LGLPYDYPIDTWSVGCTLYELYTGKILFPGRT  639 (752)
T ss_pred             ecCcccCCccceeeceeeEEeeccceecCCCC
Confidence            46789999999999999999999998887543


No 382
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=97.93  E-value=9.5e-06  Score=57.68  Aligned_cols=75  Identities=20%  Similarity=0.212  Sum_probs=46.9

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNA   84 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (122)
                      -+.++|=|+|||++|||+.|..||.... ....+...+.+.    .      . ....+                ..+..
T Consensus       312 HgsAVDWWtfGIflYEmLyG~TPFKG~~-~~~Tl~NIv~~~----l------~-Fp~~~----------------~vs~~  363 (459)
T KOG0610|consen  312 HGSAVDWWTFGIFLYEMLYGTTPFKGSN-NKETLRNIVGQP----L------K-FPEEP----------------EVSSA  363 (459)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCcCCCC-chhhHHHHhcCC----C------c-CCCCC----------------cchhH
Confidence            4578999999999999999999997432 122222222110    0      0 00000                23345


Q ss_pred             HHHHhhhcCCCCcCCCCC----hHHHH
Q 036557           85 IIKTGVLCSTESPFERME----MRGVV  107 (122)
Q Consensus        85 ~~~l~~~C~~~~p~~Rps----~~~v~  107 (122)
                      ..+|+...+..||..|--    +.+|.
T Consensus       364 akDLIr~LLvKdP~kRlg~~rGA~eIK  390 (459)
T KOG0610|consen  364 AKDLIRKLLVKDPSKRLGSKRGAAEIK  390 (459)
T ss_pred             HHHHHHHHhccChhhhhccccchHHhh
Confidence            567778888999999987    55554


No 383
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=97.92  E-value=1.1e-05  Score=60.64  Aligned_cols=30  Identities=27%  Similarity=0.255  Sum_probs=27.0

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccC
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATF   32 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~   32 (122)
                      +.|+..+|.|||||++||++||..||....
T Consensus       199 ~~y~~tVDLWS~GvtlY~caTG~lPF~p~~  228 (732)
T KOG4250|consen  199 KKYTATVDLWSFGVTLYECATGELPFIPFG  228 (732)
T ss_pred             cCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence            568999999999999999999999997544


No 384
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=97.77  E-value=1.7e-05  Score=51.40  Aligned_cols=27  Identities=22%  Similarity=0.450  Sum_probs=24.2

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCC
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTD   29 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~   29 (122)
                      ..++.++|||+||++++|+++|+.||.
T Consensus       175 ~~~~~~~Dv~~lG~~~~~l~~g~~pf~  201 (225)
T smart00221      175 KGYGEAVDIWSLGVILYELLWGPEPFS  201 (225)
T ss_pred             CCCCchhhHHHHHHHHHHHHHCCCCcc
Confidence            356679999999999999999999996


No 385
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=97.72  E-value=1.5e-05  Score=57.10  Aligned_cols=72  Identities=15%  Similarity=0.123  Sum_probs=46.1

Q ss_pred             CCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHHHH
Q 036557            7 MTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNAII   86 (122)
Q Consensus         7 ~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (122)
                      ..+|.||+||+||-++.|.-||+...     .-..+++...+...+          +                ..+....
T Consensus       232 PEVDsWsLGvLLYtLVyGtMPFDG~D-----hk~lvrQIs~GaYrE----------P----------------~~PSdA~  280 (668)
T KOG0611|consen  232 PEVDSWSLGVLLYTLVYGTMPFDGRD-----HKRLVRQISRGAYRE----------P----------------ETPSDAS  280 (668)
T ss_pred             CccchhhHHHHHHHHhhcccccCCch-----HHHHHHHhhcccccC----------C----------------CCCchHH
Confidence            56899999999999999999997421     111222111111000          0                2223345


Q ss_pred             HHhhhcCCCCcCCCCChHHHHHH
Q 036557           87 KTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        87 ~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .|+++++..+|+.|.|+.+|...
T Consensus       281 gLIRwmLmVNP~RRATieDiAsH  303 (668)
T KOG0611|consen  281 GLIRWMLMVNPERRATIEDIASH  303 (668)
T ss_pred             HHHHHHHhcCcccchhHHHHhhh
Confidence            66777888999999999998654


No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=97.71  E-value=4.3e-05  Score=56.43  Aligned_cols=22  Identities=32%  Similarity=0.570  Sum_probs=18.7

Q ss_pred             CccchhhhHHHHHHHhccc-CCC
Q 036557            8 TGDVYSFGILLLEMFIRRR-PTD   29 (122)
Q Consensus         8 ~sDV~SfGv~l~el~t~~~-p~~   29 (122)
                      +.||||+||+++||+++.. |+.
T Consensus       412 ~~DvwSlGvil~em~~~~l~p~~  434 (507)
T PLN03224        412 LFDSYTAGVLLMQMCVPELRPVA  434 (507)
T ss_pred             ccchhhHHHHHHHHHhCCCCCcc
Confidence            4799999999999999865 554


No 387
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=97.69  E-value=4.1e-05  Score=56.17  Aligned_cols=26  Identities=23%  Similarity=0.457  Sum_probs=23.1

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCc
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      -+..+|.||+||+++|+++|++||..
T Consensus       596 HD~avDyWaLGIli~ELL~G~pPFs~  621 (732)
T KOG0614|consen  596 HDRAVDYWALGILIYELLTGSPPFSG  621 (732)
T ss_pred             cchhhHHHHHHHHHHHHHcCCCCCCC
Confidence            35678999999999999999999963


No 388
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=97.64  E-value=0.00022  Score=48.41  Aligned_cols=27  Identities=22%  Similarity=0.333  Sum_probs=23.7

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCC
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTD   29 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~   29 (122)
                      ..|+.+.|||.-||++.||+++.+-+.
T Consensus       204 r~yg~~iDiWgAgCimaeMwtrspimq  230 (376)
T KOG0669|consen  204 REYGPPIDIWGAGCIMAEMWTRSPIMQ  230 (376)
T ss_pred             cccCCcchhHhHHHHHHHHHccCcccc
Confidence            358899999999999999999987764


No 389
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=97.62  E-value=6.1e-05  Score=52.19  Aligned_cols=26  Identities=15%  Similarity=0.194  Sum_probs=23.3

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCC
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTD   29 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~   29 (122)
                      .+...+||||.||++.||++|+--|.
T Consensus       193 ~~ke~vdiwSvGci~gEli~~~Vlf~  218 (369)
T KOG0665|consen  193 GYKENVDIWSVGCIMGELILGTVLFP  218 (369)
T ss_pred             CCcccchhhhhhhHHHHHhhceEEec
Confidence            48899999999999999999987765


No 390
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=97.60  E-value=2.6e-05  Score=53.51  Aligned_cols=29  Identities=21%  Similarity=0.321  Sum_probs=26.0

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      +..++..+|=|+|||+++||+.|.+||..
T Consensus       215 sk~ynkavDWWalGVLIYEMlaG~pPF~~  243 (355)
T KOG0616|consen  215 SKGYNKAVDWWALGVLIYEMLAGYPPFYD  243 (355)
T ss_pred             cCCCCcchhHHHHHHHHHHHHcCCCCCcC
Confidence            34688999999999999999999999974


No 391
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=97.60  E-value=4.3e-05  Score=54.26  Aligned_cols=104  Identities=14%  Similarity=0.193  Sum_probs=57.7

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHh---hcCc-------------hhhhH-----hh
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIME---IVDP-------------SILME-----LM   63 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------~~~~~-----~~   63 (122)
                      =+++.||||-|||++-+++++.||.....+...+.+.+.......+.+   ....             .....     ..
T Consensus       255 QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~  334 (418)
T KOG1167|consen  255 QTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIE  334 (418)
T ss_pred             cCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChh
Confidence            467899999999999999999999765544443333332111111100   0000             00000     01


Q ss_pred             hccCCCCCccchhhH-HHHHHHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           64 ANNCMIPEDRGRAKT-EECLNAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        64 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .+.+..+++...+.. ...+...+++..+|+..+|..|-++++.+.
T Consensus       335 ~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk  380 (418)
T KOG1167|consen  335 SIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK  380 (418)
T ss_pred             hcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence            111111111111111 223446789999999999999999998764


No 392
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=97.58  E-value=4e-05  Score=55.43  Aligned_cols=29  Identities=28%  Similarity=0.413  Sum_probs=26.3

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++|+...|=||+||++|||+.|+.||..
T Consensus       360 ne~Y~~s~Dwf~lGCllYemi~G~sPFr~  388 (591)
T KOG0986|consen  360 NEVYDFSPDWFSLGCLLYEMIAGHSPFRQ  388 (591)
T ss_pred             CCcccCCccHHHHHhHHHHHHcccCchhh
Confidence            45799999999999999999999999963


No 393
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=97.53  E-value=4.1e-05  Score=58.86  Aligned_cols=79  Identities=11%  Similarity=0.099  Sum_probs=52.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .-|+.++|+||+||+-.||.-|.+|+...     +-.         .....+.+.-.             .....+..-.
T Consensus       203 ~tyd~R~D~WsLGITaIEladG~PPl~Dm-----HPm---------raLF~IpRNPP-------------PkLkrp~kWs  255 (953)
T KOG0587|consen  203 ATYDYRSDLWSLGITAIEMAEGAPPLCDM-----HPM---------RALFLIPRNPP-------------PKLKRPKKWS  255 (953)
T ss_pred             CCcccccchhhccceeehhcCCCCCccCc-----chh---------hhhccCCCCCC-------------ccccchhhHH
Confidence            34788999999999999999999998632     111         11111110000             0011122445


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      +.+.+++..|+..+-.+||++.++++
T Consensus       256 ~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  256 KKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             HHHHHHHHHHHhhccccCcchhhhcc
Confidence            67899999999999999999998864


No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=97.52  E-value=1.4e-05  Score=61.04  Aligned_cols=75  Identities=12%  Similarity=0.147  Sum_probs=46.8

Q ss_pred             CCCCccchhhhHHHHHHHhc-ccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIR-RRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLN   83 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (122)
                      -+.++||+|+||+++.+++| ..||......+.++..-         ...+. .+. ..                .++  
T Consensus       691 ~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~---------~~~L~-~L~-~~----------------~d~--  741 (903)
T KOG1027|consen  691 KTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTG---------NYTLV-HLE-PL----------------PDC--  741 (903)
T ss_pred             cCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcC---------cccee-eec-cC----------------chH--
Confidence            45678999999999999995 89996422111111000         00000 000 00                022  


Q ss_pred             HHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           84 AIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        84 ~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ...+|+..+++.+|..||++.+|+.
T Consensus       742 eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  742 EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             HHHHHHHHhcCCCcccCCCHHHHhC
Confidence            5577888999999999999999974


No 395
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=97.42  E-value=9.3e-05  Score=50.56  Aligned_cols=38  Identities=16%  Similarity=0.299  Sum_probs=28.6

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFA   42 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~   42 (122)
                      ....+|||.|||+++.++||+.|+......+.....|.
T Consensus       202 ~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~  239 (378)
T KOG1345|consen  202 VNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE  239 (378)
T ss_pred             ecccccchheeeeeeeeecCCCcchhhhccCchHHHHH
Confidence            45679999999999999999999874433444444443


No 396
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.40  E-value=8e-05  Score=52.10  Aligned_cols=28  Identities=21%  Similarity=0.356  Sum_probs=25.3

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCcc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDAT   31 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~   31 (122)
                      -|...+|=|..||++|||++|+.||+..
T Consensus       344 DYgraVDWWG~GVVMYEMmCGRLPFyn~  371 (516)
T KOG0690|consen  344 DYGRAVDWWGVGVVMYEMMCGRLPFYNK  371 (516)
T ss_pred             cccceeehhhhhHHHHHHHhccCccccc
Confidence            3778999999999999999999999854


No 397
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.34  E-value=4.8e-05  Score=56.28  Aligned_cols=25  Identities=24%  Similarity=0.449  Sum_probs=22.8

Q ss_pred             CCCccchhhhHHHHHHHhcccCCCc
Q 036557            6 SMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         6 s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ...+|+||+|+++|-++.|..||+.
T Consensus       233 gpe~D~Wslgvvly~LV~GsLPFDG  257 (596)
T KOG0586|consen  233 GPEVDIWSLGVVLYALVEGSLPFDG  257 (596)
T ss_pred             CcceehhhhhhhheeeeecccccCC
Confidence            4679999999999999999999973


No 398
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=97.32  E-value=0.00029  Score=56.00  Aligned_cols=76  Identities=14%  Similarity=0.141  Sum_probs=48.3

Q ss_pred             CCCCccchhhhHHHHHHHh-cccCCCccCCCCCcHHHHHHhhcc-chhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            5 ASMTGDVYSFGILLLEMFI-RRRPTDATFNEGLTLHEFAKMALP-EKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      .+.+-||||.||++.|+++ |+++|.        +.+....... ....+.+-    ....                  .
T Consensus       215 L~paMDIFS~GCViaELf~Eg~PlF~--------LSQL~aYr~~~~~~~e~~L----e~Ie------------------d  264 (1431)
T KOG1240|consen  215 LTPAMDIFSAGCVIAELFLEGRPLFT--------LSQLLAYRSGNADDPEQLL----EKIE------------------D  264 (1431)
T ss_pred             cChhhhhhhhhHHHHHHHhcCCCccc--------HHHHHhHhccCccCHHHHH----HhCc------------------C
Confidence            6778899999999999999 677775        2222211111 10111100    0000                  1


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKL  110 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l  110 (122)
                      ..+..+.+.+++.+|..|-++.+.++.-
T Consensus       265 ~~~Rnlil~Mi~rdPs~RlSAedyL~~y  292 (1431)
T KOG1240|consen  265 VSLRNLILSMIQRDPSKRLSAEDYLQKY  292 (1431)
T ss_pred             ccHHHHHHHHHccCchhccCHHHHHHhh
Confidence            1456778888999999999999988763


No 399
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=97.28  E-value=0.00038  Score=48.69  Aligned_cols=29  Identities=21%  Similarity=0.256  Sum_probs=26.0

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccC
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATF   32 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~   32 (122)
                      .|+.+.|.||+|||+|=|++|.+||...-
T Consensus       267 ~YDKrCDlwSLGvIlYImLsGYpPFvG~C  295 (463)
T KOG0607|consen  267 FYDKRCDLWSLGVILYIMLSGYPPFVGHC  295 (463)
T ss_pred             cccccccHHHHHHHHHHHHhCCCCccCcc
Confidence            58899999999999999999999997543


No 400
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=97.24  E-value=0.00031  Score=51.39  Aligned_cols=27  Identities=30%  Similarity=0.536  Sum_probs=22.0

Q ss_pred             CCCCCCCccchhhhHHHHHHHh-cccCC
Q 036557            2 GSEASMTGDVYSFGILLLEMFI-RRRPT   28 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t-~~~p~   28 (122)
                      |..|+.|+||||+|++|+|+++ -...+
T Consensus       436 g~~y~~kvdIyaLGlil~EL~~~f~T~~  463 (516)
T KOG1033|consen  436 GQQYSEKVDIYALGLILAELLIQFSTQF  463 (516)
T ss_pred             hhhhhhhcchhhHHHHHHHHHHHhccHH
Confidence            4568999999999999999997 44443


No 401
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.16  E-value=0.00048  Score=48.54  Aligned_cols=31  Identities=32%  Similarity=0.565  Sum_probs=27.2

Q ss_pred             CCCCCCCccchhhhHHHHHHHhcccCCCccC
Q 036557            2 GSEASMTGDVYSFGILLLEMFIRRRPTDATF   32 (122)
Q Consensus         2 ~~~~s~~sDV~SfGv~l~el~t~~~p~~~~~   32 (122)
                      |..|...+|-|++||+++||..|+.||+...
T Consensus       425 geeygfsvdwwalgvlmfemmagrspfdivg  455 (593)
T KOG0695|consen  425 GEEYGFSVDWWALGVLMFEMMAGRSPFDIVG  455 (593)
T ss_pred             ccccCceehHHHHHHHHHHHHcCCCCcceec
Confidence            4568889999999999999999999998653


No 402
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.16  E-value=0.00025  Score=48.80  Aligned_cols=27  Identities=22%  Similarity=0.441  Sum_probs=22.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .++.+.|.|++|+++|.|++++.||..
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~  252 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGL  252 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCC
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCC
Confidence            467889999999999999999999974


No 403
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=97.01  E-value=0.001  Score=52.91  Aligned_cols=27  Identities=26%  Similarity=0.425  Sum_probs=25.9

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCC
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTD   29 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~   29 (122)
                      +.|..-+|=||+||++|||+.|..||+
T Consensus       256 g~yG~ecDwWSlGV~~YEMlyG~TPFY  282 (1317)
T KOG0612|consen  256 GEYGRECDWWSLGVFMYEMLYGETPFY  282 (1317)
T ss_pred             cccCCccchhhhHHHHHHHHcCCCcch
Confidence            689999999999999999999999997


No 404
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=96.85  E-value=0.001  Score=45.71  Aligned_cols=27  Identities=19%  Similarity=0.304  Sum_probs=23.5

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCC
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTD   29 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~   29 (122)
                      ..|+.+.||||.||++.|++.++--|.
T Consensus       233 RhYs~AvDiWSVGCIFaELLgRrILFQ  259 (449)
T KOG0664|consen  233 RRYTGAVDIWSVGCIFAELLQRKILFQ  259 (449)
T ss_pred             hhhcCccceehhhHHHHHHHhhhhhhh
Confidence            369999999999999999998776664


No 405
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=96.47  E-value=0.0022  Score=46.31  Aligned_cols=24  Identities=29%  Similarity=0.423  Sum_probs=22.3

Q ss_pred             CCccchhhhHHHHHHHhcccCCCc
Q 036557            7 MTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         7 ~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      .|.|.|+-|.+-||+++...||+.
T Consensus       436 ~kAD~WA~GalaYEIfg~~NPFY~  459 (598)
T KOG4158|consen  436 EKADTWAAGALAYEIFGRSNPFYK  459 (598)
T ss_pred             chhhhhhhhhhHHHHhccCCcccc
Confidence            589999999999999999999984


No 406
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=96.45  E-value=0.0016  Score=45.57  Aligned_cols=28  Identities=14%  Similarity=0.230  Sum_probs=24.6

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCcc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDAT   31 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~   31 (122)
                      .|+.+.|||+.||++.|+++..+-|...
T Consensus       216 hYT~AiDvWAiGCIfaElLtl~PlF~g~  243 (438)
T KOG0666|consen  216 HYTKAIDVWAIGCIFAELLTLEPLFKGR  243 (438)
T ss_pred             cccchhhhHHHHHHHHHHHccCccccch
Confidence            5899999999999999999988877543


No 407
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=96.20  E-value=0.0019  Score=48.88  Aligned_cols=81  Identities=14%  Similarity=0.099  Sum_probs=49.6

Q ss_pred             CCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHHHH
Q 036557            7 MTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNAII   86 (122)
Q Consensus         7 ~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (122)
                      ...||||-|+++..|++++.|+......+..+.....   . .......                 .+.......+....
T Consensus       504 r~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~---~-~~~~~~~-----------------~~~~~~~~lp~~~~  562 (601)
T KOG0590|consen  504 RAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNY---S-DQRNIFE-----------------GPNRLLSLLPRETR  562 (601)
T ss_pred             chhhhhhccceEEEEecCCCccccccccccchhhhcc---c-ccccccc-----------------ChHHHHHhchhhHH
Confidence            4589999999999999999998654433332200000   0 0000000                 00011113445557


Q ss_pred             HHhhhcCCCCcCCCCChHHHHH
Q 036557           87 KTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        87 ~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      .++.+.++.+|..|-++.++++
T Consensus       563 ~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  563 IIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             HHHHHHccCChhheecHHHHhh
Confidence            7888899999999999999974


No 408
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=96.05  E-value=0.0076  Score=45.94  Aligned_cols=81  Identities=12%  Similarity=0.052  Sum_probs=49.4

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      +-|.+++|||+.|+.-.|+--.++|-...     +-....... .   ....++.-....                ..-.
T Consensus       190 ggynqlcdiwa~gitAiel~eLqpplfdl-----hpmr~l~Lm-T---kS~~qpp~lkDk----------------~kws  244 (829)
T KOG0576|consen  190 GGYNQLCDIWALGITAIELGELQPPLFDL-----HPMRALFLM-T---KSGFQPPTLKDK----------------TKWS  244 (829)
T ss_pred             ccccccccccccccchhhhhhcCCccccc-----chHHHHHHh-h---ccCCCCCcccCC----------------ccch
Confidence            45889999999999999988777774311     100000000 0   001111111100                1335


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHH
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVA  108 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~  108 (122)
                      ..+.++++.|+..+|..||+.+.++.
T Consensus       245 ~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  245 EFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             HHHHHHHHHHhcCCCccCCChhhhee
Confidence            57889999999999999999987654


No 409
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=95.68  E-value=0.0089  Score=45.64  Aligned_cols=30  Identities=27%  Similarity=0.362  Sum_probs=26.1

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCccCC
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDATFN   33 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~~~   33 (122)
                      -++.-+|-||.||||+||+.|+.||.....
T Consensus       847 g~~q~cdwws~gvil~em~~g~~pf~~~tp  876 (1034)
T KOG0608|consen  847 GYTQLCDWWSVGVILYEMLVGQPPFLADTP  876 (1034)
T ss_pred             CccccchhhHhhHHHHHHhhCCCCccCCCC
Confidence            367889999999999999999999976543


No 410
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=94.57  E-value=0.024  Score=42.52  Aligned_cols=82  Identities=16%  Similarity=0.090  Sum_probs=43.4

Q ss_pred             CCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHHHHH
Q 036557            6 SMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECLNAI   85 (122)
Q Consensus         6 s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (122)
                      ..|+||||.|.++.|+.-|..-+....  .......+.+...      .+........          -......+...+
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~--~s~~l~~i~k~~~------~d~~~~~~a~----------e~~~~~~~d~~~  170 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELT--ESEYLEILLKYYT------DDQELLSTAM----------EHLIQLLADKKR  170 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHH--HHHHHHHHHHhcc------CchhHHHHHH----------HHHHHHhhhHhH
Confidence            469999999999999988766543110  0000111111111      1110000000          001123556677


Q ss_pred             HHHhhhcCCCCcCCCCChHH
Q 036557           86 IKTGVLCSTESPFERMEMRG  105 (122)
Q Consensus        86 ~~l~~~C~~~~p~~Rps~~~  105 (122)
                      ..+...|.-..|..||...+
T Consensus       171 ~~~~~~c~~~~~~ir~l~~~  190 (725)
T KOG1093|consen  171 LPLLKKCLWLEPIIRPLPME  190 (725)
T ss_pred             HHHhccCCccccccccchhH
Confidence            88889999888888875443


No 411
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=94.29  E-value=0.065  Score=34.95  Aligned_cols=26  Identities=23%  Similarity=0.155  Sum_probs=21.4

Q ss_pred             CCCCCccchhhhHHHHHHHh-cccCCC
Q 036557            4 EASMTGDVYSFGILLLEMFI-RRRPTD   29 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t-~~~p~~   29 (122)
                      -|++.-|+||-||++.|+.. |++-|.
T Consensus       178 ly~tsidmwsagcifaelanagrplfp  204 (292)
T KOG0662|consen  178 LYSTSIDMWSAGCIFAELANAGRPLFP  204 (292)
T ss_pred             hhccchHhhhcchHHHHHhhcCCCCCC
Confidence            47889999999999999988 444454


No 412
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=94.09  E-value=0.14  Score=34.18  Aligned_cols=28  Identities=32%  Similarity=0.539  Sum_probs=24.3

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ..++...|+||+|+++++++++..|+..
T Consensus       186 ~~~~~~~D~~s~g~~~~~~~~~~~p~~~  213 (384)
T COG0515         186 AYASSSSDIWSLGITLYELLTGLPPFEG  213 (384)
T ss_pred             CCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            3677899999999999999999999653


No 413
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=93.57  E-value=0.03  Score=39.71  Aligned_cols=23  Identities=17%  Similarity=0.186  Sum_probs=18.9

Q ss_pred             HHhhhcCCCCcCCCCChHHHHHH
Q 036557           87 KTGVLCSTESPFERMEMRGVVAK  109 (122)
Q Consensus        87 ~l~~~C~~~~p~~Rps~~~v~~~  109 (122)
                      .+...|+...|..||++.+++.+
T Consensus       309 ~~i~kcl~~eP~~rp~ar~llfH  331 (458)
T KOG1266|consen  309 GSITKCLEGEPNGRPDARLLLFH  331 (458)
T ss_pred             CcCcccccCCCCCCcchhhhhcC
Confidence            45678999999999999987654


No 414
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=92.26  E-value=0.09  Score=39.78  Aligned_cols=26  Identities=27%  Similarity=0.477  Sum_probs=23.2

Q ss_pred             CCCCccchhhhHHHHHHHhcccCCCc
Q 036557            5 ASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      ....+|-||||++++|+++|..||..
T Consensus       168 h~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  168 HLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             cCCcccchhhhhhHHHHhhCCCCCch
Confidence            35678999999999999999999864


No 415
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=91.48  E-value=0.077  Score=42.68  Aligned_cols=28  Identities=21%  Similarity=0.306  Sum_probs=25.0

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCcc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDAT   31 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~~   31 (122)
                      -|...+|=|++|+++||-+-|+-||...
T Consensus       234 gygkpvdwwamGiIlyeFLVgcvpffGd  261 (1205)
T KOG0606|consen  234 GYGKPVDWWAMGIILYEFLVGCVPFFGD  261 (1205)
T ss_pred             ccCCCccHHHHHHHHHHHheeeeeccCC
Confidence            3778999999999999999999999754


No 416
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=88.73  E-value=0.024  Score=42.58  Aligned_cols=27  Identities=15%  Similarity=0.266  Sum_probs=24.3

Q ss_pred             CCCCCccchhhhHHHHHHHhcccCCCc
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRPTDA   30 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p~~~   30 (122)
                      -|+..-|+||.||++|--++|..||..
T Consensus       742 GyNrSLDMWSVGVIiYVsLSGTFPFNE  768 (888)
T KOG4236|consen  742 GYNRSLDMWSVGVIIYVSLSGTFPFNE  768 (888)
T ss_pred             cccccccceeeeEEEEEEecccccCCC
Confidence            478889999999999999999999973


No 417
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=87.02  E-value=4.2  Score=30.42  Aligned_cols=102  Identities=16%  Similarity=0.065  Sum_probs=54.3

Q ss_pred             CCCCccchhhhHHHHHHHhc-ccCCCccCCC---CCcHH-HHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHH
Q 036557            5 ASMTGDVYSFGILLLEMFIR-RRPTDATFNE---GLTLH-EFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTE   79 (122)
Q Consensus         5 ~s~~sDV~SfGv~l~el~t~-~~p~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (122)
                      -+..+|-|.+|+++++++.| +.||......   ..... .+.....    ...-+.+. +-      ...+...+.  .
T Consensus       198 r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f----~ya~~~~~-g~------~p~P~~~P~--~  264 (637)
T COG4248         198 RTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRF----AYASDQRR-GL------KPPPRSIPL--S  264 (637)
T ss_pred             CCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhccee----eechhccC-CC------CCCCCCCCh--h
Confidence            34678999999999999885 9999753211   00000 0000000    00000000 00      000001111  1


Q ss_pred             HHHHHHHHHhhhcCCCC--cCCCCChHHHHHHHHHhHHhhhc
Q 036557           80 ECLNAIIKTGVLCSTES--PFERMEMRGVVAKLCHTRESFLG  119 (122)
Q Consensus        80 ~~~~~~~~l~~~C~~~~--p~~Rps~~~v~~~l~~i~~~~~~  119 (122)
                      -.+..+..+...|+...  +.-||+.+-.+..|..+.+++.+
T Consensus       265 ~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~  306 (637)
T COG4248         265 MLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK  306 (637)
T ss_pred             hcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence            22345666777888744  56899999999988888776643


No 418
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=80.38  E-value=7.6  Score=27.11  Aligned_cols=89  Identities=17%  Similarity=0.068  Sum_probs=52.1

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCccCCCCCcHHHHHHhhccchhHhhcCchhhhHhhhccCCCCCccchhhHHHHH
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDATFNEGLTLHEFAKMALPEKIMEIVDPSILMELMANNCMIPEDRGRAKTEECL   82 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (122)
                      ...+.+-|+||++-++.|+..|..|+........ .......    ........     ..               ...+
T Consensus       212 ~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~----~~~~~~~~-----~~---------------~~~~  266 (322)
T KOG1164|consen  212 IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKD----PRKLLTDR-----FG---------------DLKP  266 (322)
T ss_pred             CccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHH----hhhhcccc-----cc---------------CCCh
Confidence            4567889999999999999999999853221111 0000000    00000000     00               0233


Q ss_pred             HHHHHHhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           83 NAIIKTGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        83 ~~~~~l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      ..+..+...+-..+..++|....+...|......
T Consensus       267 ~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  267 EEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS  300 (322)
T ss_pred             HHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence            4455555555568889999999988887776654


No 419
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=78.97  E-value=1  Score=36.70  Aligned_cols=29  Identities=24%  Similarity=0.363  Sum_probs=24.6

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCCCcc
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPTDAT   31 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~~~~   31 (122)
                      ..-....|.|++|++++|.++|..||...
T Consensus      1010 ~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 1010 RRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred             ccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence            34557789999999999999999999743


No 420
>PF05953 Allatostatin:  Allatostatin;  InterPro: IPR010276 This family consists of allatostatins, bombystatins, helicostatins, cydiastatins and schistostatin from several insect species. Allatostatins (ASTs) of the Tyr/Phe-Xaa-Phe-Gly Leu/Ile-NH2 family are a group of insect neuropeptides that inhibit juvenile hormone biosynthesis by the corpora allata [].; GO: 0005184 neuropeptide hormone activity
Probab=78.10  E-value=0.72  Score=15.76  Aligned_cols=9  Identities=44%  Similarity=1.018  Sum_probs=5.9

Q ss_pred             CccchhhhH
Q 036557            8 TGDVYSFGI   16 (122)
Q Consensus         8 ~sDV~SfGv   16 (122)
                      ++..|+||.
T Consensus         2 R~~~Y~FGL   10 (11)
T PF05953_consen    2 RSPMYSFGL   10 (11)
T ss_pred             CCCccccCc
Confidence            345688874


No 421
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=76.42  E-value=0.51  Score=36.12  Aligned_cols=27  Identities=33%  Similarity=0.416  Sum_probs=22.9

Q ss_pred             CCCccchhhhHHHHHHHhcccCCCccC
Q 036557            6 SMTGDVYSFGILLLEMFIRRRPTDATF   32 (122)
Q Consensus         6 s~~sDV~SfGv~l~el~t~~~p~~~~~   32 (122)
                      ....|+||.|+++..+++|..|.....
T Consensus       208 ~~~~d~~S~g~~l~~~~~g~~p~~~~~  234 (601)
T KOG0590|consen  208 GPSVDVWSLGIVLSAMLTGELPWDFPS  234 (601)
T ss_pred             CCCcccccccccccccccCCCCccccc
Confidence            467899999999999999999976443


No 422
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=61.22  E-value=1.6  Score=33.82  Aligned_cols=24  Identities=21%  Similarity=0.548  Sum_probs=18.9

Q ss_pred             CCCCCccchhhhHHHHHHHhcccC
Q 036557            4 EASMTGDVYSFGILLLEMFIRRRP   27 (122)
Q Consensus         4 ~~s~~sDV~SfGv~l~el~t~~~p   27 (122)
                      ..+.++|+||+|++++-+..+..+
T Consensus       185 ~~~~~sd~fSlG~li~~i~~~gk~  208 (700)
T KOG2137|consen  185 TNTPASDVFSLGVLIYTIYNGGKS  208 (700)
T ss_pred             cccccccceeeeeEEEEEecCCcc
Confidence            356789999999999988854444


No 423
>PF08189 Meleagrin:  Meleagrin/Cygnin family;  InterPro: IPR012573 This family consists of meleagrin and cygnin basic peptides that are isolated from turkey and black swan respectively. Both peptides are low in molecular weight and contain three disulphide bonds with high concentrations of aromatic residues. These peptides show similarity to transferrins and probably play some vital role in avian eggs but the exact function is still unknown [].
Probab=60.69  E-value=2.6  Score=19.66  Aligned_cols=9  Identities=33%  Similarity=0.678  Sum_probs=7.2

Q ss_pred             CCccchhhh
Q 036557            7 MTGDVYSFG   15 (122)
Q Consensus         7 ~~sDV~SfG   15 (122)
                      .|+|||+|.
T Consensus        17 sKt~vWa~s   25 (39)
T PF08189_consen   17 SKTDVWAFS   25 (39)
T ss_pred             cccceeeec
Confidence            678999874


No 424
>PF04301 DUF452:  Protein of unknown function (DUF452);  InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=53.70  E-value=24  Score=23.53  Aligned_cols=21  Identities=14%  Similarity=0.029  Sum_probs=16.3

Q ss_pred             CCCCChHHHHHHHHHhHHhhh
Q 036557           98 FERMEMRGVVAKLCHTRESFL  118 (122)
Q Consensus        98 ~~Rps~~~v~~~l~~i~~~~~  118 (122)
                      ..|++..++...|..+.+...
T Consensus       137 ~~r~~~~elk~EL~~l~~~~~  157 (213)
T PF04301_consen  137 PPRRSFEELKEELAALYEFIK  157 (213)
T ss_pred             CcCCCHHHHHHHHHHHHHHHh
Confidence            468889999999988866543


No 425
>PF13220 DUF4028:  Protein of unknown function (DUF4028)
Probab=46.49  E-value=33  Score=17.54  Aligned_cols=22  Identities=27%  Similarity=0.391  Sum_probs=17.5

Q ss_pred             cCCCCChHHHHHHHHHhHHhhh
Q 036557           97 PFERMEMRGVVAKLCHTRESFL  118 (122)
Q Consensus        97 p~~Rps~~~v~~~l~~i~~~~~  118 (122)
                      .-.||++.+|-+....-.+++.
T Consensus        38 elgrptfkevekdwkenresf~   59 (65)
T PF13220_consen   38 ELGRPTFKEVEKDWKENRESFM   59 (65)
T ss_pred             hhCCCcHHHHHHHHHHhhhhhc
Confidence            3479999999988887777664


No 426
>KOG3960 consensus Myogenic helix-loop-helix transcription factor [Transcription]
Probab=44.18  E-value=67  Score=22.17  Aligned_cols=38  Identities=13%  Similarity=0.086  Sum_probs=26.8

Q ss_pred             HHHHHHHHhhhcCCCCcCCCCChHHHH-------HHHHHhHHhhh
Q 036557           81 CLNAIIKTGVLCSTESPFERMEMRGVV-------AKLCHTRESFL  118 (122)
Q Consensus        81 ~~~~~~~l~~~C~~~~p~~Rps~~~v~-------~~l~~i~~~~~  118 (122)
                      .+.+..++.++|...+|++|.--.||+       +.|+.++++..
T Consensus       132 KVNEAFE~LKRrT~~NPNQRLPKVEILRsAI~YIE~Lq~LL~~~~  176 (284)
T KOG3960|consen  132 KVNEAFETLKRRTSSNPNQRLPKVEILRSAIRYIERLQALLQEQD  176 (284)
T ss_pred             HHHHHHHHHHhhcCCCccccccHHHHHHHHHHHHHHHHHHHHHhh
Confidence            355677889999999999996655554       34555555443


No 427
>PF08247 ENOD40:  ENOD40 protein;  InterPro: IPR013186 The soybean early nodulin 40 (ENOD40) mRNA contains two short overlapping ORFs; in vitro translation yields two peptides of 12 and 24 amino acids []. The putative role of the ENOD40 genes has been in favour of organogenesis, such as induction of the cortical cell divisions that lead to initiation of nodule primordia, in developing lateral roots and embryonic tissues. This supports the hypothesis for a role of ENOD40 in lateral organ development [].
Probab=40.60  E-value=5.8  Score=13.66  Aligned_cols=8  Identities=38%  Similarity=0.426  Sum_probs=4.9

Q ss_pred             hhhcCCCC
Q 036557           89 GVLCSTES   96 (122)
Q Consensus        89 ~~~C~~~~   96 (122)
                      |..||+..
T Consensus         1 m~l~wqks    8 (12)
T PF08247_consen    1 MELCWQKS    8 (12)
T ss_pred             CceeEeee
Confidence            35688754


No 428
>PF15361 RIC3:  Resistance to inhibitors of cholinesterase homologue 3
Probab=38.69  E-value=21  Score=22.47  Aligned_cols=13  Identities=31%  Similarity=0.899  Sum_probs=11.0

Q ss_pred             chhhhHHHHHHHh
Q 036557           11 VYSFGILLLEMFI   23 (122)
Q Consensus        11 V~SfGv~l~el~t   23 (122)
                      ||.|||+++-+.+
T Consensus        88 lYtiGI~~f~lY~  100 (152)
T PF15361_consen   88 LYTIGIVLFILYT  100 (152)
T ss_pred             HHHHHHHHHHHHH
Confidence            6999999887766


No 429
>PF14707 Sulfatase_C:  C-terminal region of aryl-sulfatase; PDB: 1P49_A 1E33_P 1E1Z_P 1N2K_A 1N2L_A 1E2S_P 1E3C_P 1AUK_A.
Probab=34.29  E-value=71  Score=19.24  Aligned_cols=19  Identities=21%  Similarity=0.207  Sum_probs=13.1

Q ss_pred             CChHHHHHHHHHhHHhhhc
Q 036557          101 MEMRGVVAKLCHTRESFLG  119 (122)
Q Consensus       101 ps~~~v~~~l~~i~~~~~~  119 (122)
                      |.+.+|+..|.++.+.+..
T Consensus        79 p~~~~vl~~l~~~~~~~~~   97 (131)
T PF14707_consen   79 PEYKEVLAELQKLVDEHRA   97 (131)
T ss_dssp             CCHHHHHHHHHHHHHHHCC
T ss_pred             hhHHHHHHHHHHHHHHHHh
Confidence            6666888887777666543


No 430
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=24.71  E-value=41  Score=25.71  Aligned_cols=26  Identities=23%  Similarity=0.483  Sum_probs=21.8

Q ss_pred             CCCCCCccchhhhHHHHHHHhcccCC
Q 036557            3 SEASMTGDVYSFGILLLEMFIRRRPT   28 (122)
Q Consensus         3 ~~~s~~sDV~SfGv~l~el~t~~~p~   28 (122)
                      +.++..+|+|++|.+..|..++....
T Consensus       302 ~l~~~~~di~sl~ev~l~~~l~~~~~  327 (524)
T KOG0601|consen  302 GLATFASDIFSLGEVILEAILGSHLP  327 (524)
T ss_pred             cccchHhhhcchhhhhHhhHhhcccc
Confidence            45778899999999999999876654


No 431
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=24.54  E-value=42  Score=26.48  Aligned_cols=16  Identities=31%  Similarity=0.517  Sum_probs=15.0

Q ss_pred             ccchhhhHHHHHHHhc
Q 036557            9 GDVYSFGILLLEMFIR   24 (122)
Q Consensus         9 sDV~SfGv~l~el~t~   24 (122)
                      .|.|-|||+++|++.|
T Consensus       184 ~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  184 IDSWGLGCLIEELFNG  199 (690)
T ss_pred             hhhhhHHHHHHHHhCc
Confidence            4999999999999998


No 432
>cd00059 FH Forkhead (FH), also known as a "winged helix".  FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as monomers, are also found in the Hepatocyte nuclear factor (HNF) proteins, which provide tissue-specific gene regulation. The structure contains 2 flexible loops or "wings" in the C-terminal region, hence the term winged helix.
Probab=23.99  E-value=74  Score=17.52  Aligned_cols=29  Identities=10%  Similarity=0.101  Sum_probs=20.9

Q ss_pred             HhhhcCCCCcCCCCChHHHHHHHHHhHHh
Q 036557           88 TGVLCSTESPFERMEMRGVVAKLCHTRES  116 (122)
Q Consensus        88 l~~~C~~~~p~~Rps~~~v~~~l~~i~~~  116 (122)
                      |+...+...|+.+.|..||.+.++.-...
T Consensus         9 LI~~Ai~~sp~~~lTL~eIy~~I~~~~py   37 (78)
T cd00059           9 LIAMAIQSSPEKRLTLSEIYKWISDNFPY   37 (78)
T ss_pred             HHHHHHHhCCCCCeeHHHHHHHHHHhCCc
Confidence            33444556889999999999988765443


No 433
>smart00707 RPEL Repeat in Drosophila CG10860, human KIAA0680 and C. elegans F26H9.2.
Probab=23.70  E-value=54  Score=14.08  Aligned_cols=11  Identities=9%  Similarity=-0.031  Sum_probs=8.3

Q ss_pred             CCCCChHHHHH
Q 036557           98 FERMEMRGVVA  108 (122)
Q Consensus        98 ~~Rps~~~v~~  108 (122)
                      ..||+-.++++
T Consensus         8 ~~RP~~eeLv~   18 (26)
T smart00707        8 SQRPTREELEE   18 (26)
T ss_pred             HcCCCHHHHHH
Confidence            47888888765


No 434
>PF02755 RPEL:  RPEL repeat;  InterPro: IPR004018 The RPEL repeat is named after four conserved amino acids it contains. The function of the RPEL repeat is unknown however it might be a DNA binding repeat based on the observation that Q9VZY2 from SWISSPROT contains a SAP domain that is also implicated in DNA binding.; PDB: 2YJE_M 2V52_M 2YJF_M 2V51_E.
Probab=22.93  E-value=49  Score=14.15  Aligned_cols=10  Identities=20%  Similarity=0.235  Sum_probs=5.1

Q ss_pred             CCCChHHHHH
Q 036557           99 ERMEMRGVVA  108 (122)
Q Consensus        99 ~Rps~~~v~~  108 (122)
                      .||+..++++
T Consensus         9 ~RP~~~eLv~   18 (26)
T PF02755_consen    9 QRPTREELVE   18 (26)
T ss_dssp             T---HHHHHH
T ss_pred             cCCCHHHHHH
Confidence            6888888765


No 435
>PF10866 DUF2704:  Protein of unknown function (DUF2704);  InterPro: IPR022594  This group of viral proteins has no known function. 
Probab=21.95  E-value=58  Score=20.69  Aligned_cols=16  Identities=38%  Similarity=0.607  Sum_probs=13.9

Q ss_pred             cchhhhHHHHHHHhcc
Q 036557           10 DVYSFGILLLEMFIRR   25 (122)
Q Consensus        10 DV~SfGv~l~el~t~~   25 (122)
                      .|||.|+-|+|++.|-
T Consensus        62 Evysl~rqLyE~lr~~   77 (168)
T PF10866_consen   62 EVYSLGRQLYEILRGD   77 (168)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            4899999999999874


Done!