Query 036563
Match_columns 288
No_of_seqs 189 out of 2412
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 04:42:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036563.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036563hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.3E-23 4.4E-28 182.5 23.1 188 81-288 68-257 (261)
2 3dtn_A Putative methyltransfer 99.9 1.2E-23 4.2E-28 179.0 17.7 215 46-288 7-226 (234)
3 3dlc_A Putative S-adenosyl-L-m 99.9 6.7E-22 2.3E-26 165.8 19.7 179 68-279 29-207 (219)
4 3hnr_A Probable methyltransfer 99.9 6E-22 2.1E-26 166.8 16.5 201 44-287 4-211 (220)
5 3bus_A REBM, methyltransferase 99.9 2.4E-21 8.4E-26 168.5 19.7 196 42-276 6-217 (273)
6 1vl5_A Unknown conserved prote 99.9 3.8E-21 1.3E-25 166.3 19.4 165 73-276 27-191 (260)
7 2o57_A Putative sarcosine dime 99.9 8.4E-21 2.9E-25 167.2 20.4 164 70-276 65-235 (297)
8 3dh0_A SAM dependent methyltra 99.9 3.7E-21 1.3E-25 161.9 16.6 166 73-287 27-192 (219)
9 3kkz_A Uncharacterized protein 99.9 7.6E-21 2.6E-25 165.1 18.6 184 49-276 13-197 (267)
10 3ou2_A SAM-dependent methyltra 99.9 1.6E-20 5.6E-25 157.4 19.8 200 41-279 7-209 (218)
11 1xxl_A YCGJ protein; structura 99.9 1.4E-20 4.6E-25 161.0 19.2 165 73-276 11-175 (239)
12 3l8d_A Methyltransferase; stru 99.9 7.4E-21 2.5E-25 162.3 16.6 190 40-276 11-201 (242)
13 3f4k_A Putative methyltransfer 99.9 1.8E-20 6E-25 161.5 19.0 162 73-276 35-197 (257)
14 3h2b_A SAM-dependent methyltra 99.9 2.2E-20 7.6E-25 155.3 18.7 189 43-286 3-193 (203)
15 4htf_A S-adenosylmethionine-de 99.9 1.8E-20 6.2E-25 164.2 17.6 200 46-275 27-232 (285)
16 1nkv_A Hypothetical protein YJ 99.9 2.1E-20 7.2E-25 160.9 17.6 165 69-274 22-186 (256)
17 3hem_A Cyclopropane-fatty-acyl 99.9 6.1E-20 2.1E-24 162.3 20.9 172 73-277 62-245 (302)
18 3ujc_A Phosphoethanolamine N-m 99.9 2.4E-20 8E-25 161.2 17.5 163 71-276 43-207 (266)
19 3vc1_A Geranyl diphosphate 2-C 99.8 1.2E-19 4E-24 161.3 20.6 159 73-276 106-270 (312)
20 2ex4_A Adrenal gland protein A 99.8 3.9E-20 1.3E-24 158.2 16.2 189 40-276 29-226 (241)
21 3mgg_A Methyltransferase; NYSG 99.8 1.5E-19 5.1E-24 157.5 19.8 166 73-275 27-198 (276)
22 2yqz_A Hypothetical protein TT 99.8 9.8E-20 3.4E-24 157.1 18.1 190 46-274 2-195 (263)
23 3ocj_A Putative exported prote 99.8 7.3E-20 2.5E-24 162.1 17.7 174 81-288 116-304 (305)
24 1xtp_A LMAJ004091AAA; SGPP, st 99.8 2.4E-20 8.2E-25 160.3 13.5 183 45-276 53-239 (254)
25 4fsd_A Arsenic methyltransfera 99.8 6.7E-20 2.3E-24 167.6 16.9 156 81-274 81-250 (383)
26 2p7i_A Hypothetical protein; p 99.8 1.7E-19 5.7E-24 154.0 17.3 159 82-276 41-200 (250)
27 2fk8_A Methoxy mycolic acid sy 99.8 2.6E-19 9E-24 159.3 18.9 173 71-276 78-255 (318)
28 1kpg_A CFA synthase;, cyclopro 99.8 6.5E-19 2.2E-23 154.3 21.1 165 71-276 52-229 (287)
29 1y8c_A S-adenosylmethionine-de 99.8 2.2E-19 7.6E-24 153.1 17.1 212 48-288 2-245 (246)
30 3sm3_A SAM-dependent methyltra 99.8 2.1E-19 7E-24 152.3 16.4 171 83-275 30-207 (235)
31 3gwz_A MMCR; methyltransferase 99.8 1.2E-18 4.3E-23 158.3 22.6 174 73-287 192-368 (369)
32 3ege_A Putative methyltransfer 99.8 3.1E-20 1.1E-24 160.8 11.3 175 48-275 4-178 (261)
33 3g5l_A Putative S-adenosylmeth 99.8 3.4E-19 1.2E-23 153.3 17.5 113 73-208 34-146 (253)
34 3bkw_A MLL3908 protein, S-aden 99.8 2.3E-19 7.9E-24 153.0 15.8 176 74-275 34-214 (243)
35 3e23_A Uncharacterized protein 99.8 5.6E-19 1.9E-23 147.8 17.7 171 43-277 11-184 (211)
36 3e8s_A Putative SAM dependent 99.8 1E-19 3.6E-24 153.2 12.9 208 42-288 10-227 (227)
37 2p35_A Trans-aconitate 2-methy 99.8 6.6E-19 2.3E-23 151.6 18.0 164 72-270 22-185 (259)
38 3pfg_A N-methyltransferase; N, 99.8 2.7E-20 9.1E-25 161.2 9.0 174 83-288 50-249 (263)
39 1x19_A CRTF-related protein; m 99.8 1.8E-18 6.1E-23 156.6 21.1 176 73-288 180-359 (359)
40 2ip2_A Probable phenazine-spec 99.8 3.2E-18 1.1E-22 153.3 21.9 173 72-287 157-333 (334)
41 3i53_A O-methyltransferase; CO 99.8 1.9E-18 6.5E-23 154.8 20.3 168 76-287 162-331 (332)
42 2r3s_A Uncharacterized protein 99.8 1.7E-18 5.9E-23 154.9 19.9 175 73-287 153-334 (335)
43 3ccf_A Cyclopropane-fatty-acyl 99.8 2.5E-18 8.4E-23 150.2 19.4 164 73-276 47-211 (279)
44 4hg2_A Methyltransferase type 99.8 2.1E-19 7.1E-24 155.5 12.3 143 45-221 7-150 (257)
45 3bkx_A SAM-dependent methyltra 99.8 1.7E-18 5.7E-23 150.6 17.8 178 71-275 31-219 (275)
46 3i9f_A Putative type 11 methyl 99.8 9.7E-20 3.3E-24 147.2 9.0 151 76-287 10-160 (170)
47 3bxo_A N,N-dimethyltransferase 99.8 8.3E-19 2.8E-23 149.1 15.0 211 47-288 2-239 (239)
48 3mcz_A O-methyltransferase; ad 99.8 2.7E-18 9.4E-23 154.8 19.1 174 74-288 169-349 (352)
49 2aot_A HMT, histamine N-methyl 99.8 4.9E-18 1.7E-22 149.4 19.7 158 82-273 51-219 (292)
50 1ri5_A MRNA capping enzyme; me 99.8 1.3E-18 4.5E-23 152.7 15.8 213 42-275 20-250 (298)
51 1qzz_A RDMB, aclacinomycin-10- 99.8 1E-17 3.5E-22 152.3 21.6 174 73-287 172-355 (374)
52 3gu3_A Methyltransferase; alph 99.8 3.6E-18 1.2E-22 149.7 17.9 117 73-209 11-128 (284)
53 3dp7_A SAM-dependent methyltra 99.8 1.7E-18 5.8E-23 157.1 16.3 173 82-287 178-354 (363)
54 4a6d_A Hydroxyindole O-methylt 99.8 6.4E-18 2.2E-22 152.8 18.9 173 73-288 169-346 (353)
55 3d2l_A SAM-dependent methyltra 99.8 4.8E-18 1.7E-22 144.7 17.0 209 48-288 3-243 (243)
56 1tw3_A COMT, carminomycin 4-O- 99.8 2.1E-17 7.3E-22 149.4 21.8 175 73-288 173-356 (360)
57 3lcc_A Putative methyl chlorid 99.8 1.8E-18 6.1E-23 147.2 13.6 141 84-277 67-209 (235)
58 1ve3_A Hypothetical protein PH 99.8 7.2E-18 2.5E-22 142.2 17.2 116 70-209 27-144 (227)
59 2gs9_A Hypothetical protein TT 99.8 6.9E-18 2.4E-22 141.0 16.7 135 48-211 2-136 (211)
60 3dli_A Methyltransferase; PSI- 99.8 4.6E-18 1.6E-22 145.1 15.6 151 73-276 30-185 (240)
61 3jwh_A HEN1; methyltransferase 99.8 2.1E-18 7.3E-23 144.9 13.0 119 72-207 18-141 (217)
62 2xvm_A Tellurite resistance pr 99.8 4.2E-18 1.4E-22 140.6 13.1 149 74-275 23-173 (199)
63 3lst_A CALO1 methyltransferase 99.8 1.4E-17 4.9E-22 150.1 17.4 170 73-287 174-347 (348)
64 3g5t_A Trans-aconitate 3-methy 99.8 1.9E-17 6.5E-22 146.0 17.4 119 72-209 26-151 (299)
65 3jwg_A HEN1, methyltransferase 99.8 4.1E-18 1.4E-22 143.3 12.4 118 73-207 19-141 (219)
66 1wzn_A SAM-dependent methyltra 99.8 3.2E-18 1.1E-22 147.0 11.4 137 47-206 3-144 (252)
67 1vlm_A SAM-dependent methyltra 99.8 5.7E-17 1.9E-21 136.5 18.9 142 84-276 48-189 (219)
68 1pjz_A Thiopurine S-methyltran 99.8 5.8E-18 2E-22 141.3 12.1 149 76-275 15-176 (203)
69 3reo_A (ISO)eugenol O-methyltr 99.7 2.8E-17 9.6E-22 149.4 17.1 166 73-287 192-366 (368)
70 2a14_A Indolethylamine N-methy 99.7 1.4E-17 4.9E-22 144.3 14.5 164 80-288 52-260 (263)
71 3cc8_A Putative methyltransfer 99.7 7.2E-17 2.5E-21 135.9 18.1 163 73-277 23-187 (230)
72 2zfu_A Nucleomethylin, cerebra 99.7 3.9E-17 1.3E-21 136.9 16.3 165 42-287 22-190 (215)
73 4e2x_A TCAB9; kijanose, tetron 99.7 1.1E-18 3.8E-23 161.0 7.2 173 69-287 93-267 (416)
74 3p9c_A Caffeic acid O-methyltr 99.7 4.6E-17 1.6E-21 147.8 17.4 166 73-287 190-364 (364)
75 3thr_A Glycine N-methyltransfe 99.7 2.2E-17 7.5E-22 144.9 14.3 121 69-208 43-176 (293)
76 1fp1_D Isoliquiritigenin 2'-O- 99.7 4.7E-17 1.6E-21 148.0 16.6 166 73-287 198-372 (372)
77 3g2m_A PCZA361.24; SAM-depende 99.7 3.3E-17 1.1E-21 144.5 15.0 185 71-276 71-275 (299)
78 1fp2_A Isoflavone O-methyltran 99.7 8E-17 2.7E-21 145.4 17.6 156 81-287 186-352 (352)
79 2g72_A Phenylethanolamine N-me 99.7 5.2E-17 1.8E-21 142.5 15.7 149 83-276 71-257 (289)
80 3e05_A Precorrin-6Y C5,15-meth 99.7 2.4E-16 8.1E-21 131.2 18.8 116 70-207 27-142 (204)
81 3ofk_A Nodulation protein S; N 99.7 5.5E-17 1.9E-21 136.0 14.8 115 70-208 38-155 (216)
82 1xdz_A Methyltransferase GIDB; 99.7 3.8E-16 1.3E-20 133.5 19.8 132 82-276 69-203 (240)
83 2p8j_A S-adenosylmethionine-de 99.7 2.4E-17 8.2E-22 137.3 11.9 155 82-273 22-181 (209)
84 2i62_A Nicotinamide N-methyltr 99.7 9.8E-17 3.4E-21 138.3 15.9 164 80-288 53-261 (265)
85 3cgg_A SAM-dependent methyltra 99.7 2.1E-16 7.1E-21 129.6 16.8 141 82-288 45-195 (195)
86 3ggd_A SAM-dependent methyltra 99.7 1E-16 3.5E-21 137.0 15.4 159 81-275 54-219 (245)
87 3g07_A 7SK snRNA methylphospha 99.7 3.6E-17 1.2E-21 144.0 12.8 154 83-275 46-269 (292)
88 2qe6_A Uncharacterized protein 99.7 5.3E-16 1.8E-20 135.4 18.9 160 69-271 62-238 (274)
89 2b3t_A Protein methyltransfera 99.7 3.6E-16 1.2E-20 136.4 17.6 155 69-287 96-275 (276)
90 3hm2_A Precorrin-6Y C5,15-meth 99.7 2.1E-16 7E-21 128.2 14.5 117 69-208 11-128 (178)
91 3njr_A Precorrin-6Y methylase; 99.7 7E-16 2.4E-20 128.8 17.4 137 71-274 43-179 (204)
92 4dzr_A Protein-(glutamine-N5) 99.7 2.7E-17 9.3E-22 137.1 8.7 156 69-287 15-204 (215)
93 2gb4_A Thiopurine S-methyltran 99.7 4.5E-16 1.5E-20 134.2 16.6 145 80-275 65-227 (252)
94 2kw5_A SLR1183 protein; struct 99.7 5.4E-16 1.9E-20 128.5 15.7 143 83-276 30-172 (202)
95 4df3_A Fibrillarin-like rRNA/T 99.7 2.9E-16 9.9E-21 133.2 13.9 108 78-207 72-182 (233)
96 3grz_A L11 mtase, ribosomal pr 99.7 7.1E-16 2.4E-20 128.3 15.9 138 82-287 59-196 (205)
97 1dus_A MJ0882; hypothetical pr 99.7 1.3E-15 4.6E-20 124.6 17.0 119 71-209 40-159 (194)
98 1jsx_A Glucose-inhibited divis 99.7 8.9E-16 3E-20 127.7 15.9 100 83-206 65-164 (207)
99 1zg3_A Isoflavanone 4'-O-methy 99.7 5.2E-16 1.8E-20 140.4 15.4 156 82-287 192-358 (358)
100 3orh_A Guanidinoacetate N-meth 99.7 5.2E-17 1.8E-21 138.7 8.2 138 46-205 17-168 (236)
101 3g89_A Ribosomal RNA small sub 99.7 1.3E-15 4.5E-20 131.1 16.9 173 41-276 32-213 (249)
102 3m70_A Tellurite resistance pr 99.7 1.6E-16 5.5E-21 139.0 11.2 104 82-208 119-224 (286)
103 2avn_A Ubiquinone/menaquinone 99.7 1E-15 3.4E-20 132.3 15.7 137 44-209 16-154 (260)
104 1zx0_A Guanidinoacetate N-meth 99.7 2.2E-16 7.5E-21 134.5 10.9 141 46-208 17-171 (236)
105 3bgv_A MRNA CAP guanine-N7 met 99.7 1.3E-15 4.4E-20 135.2 15.7 170 83-276 34-233 (313)
106 2vdw_A Vaccinia virus capping 99.7 1.4E-15 4.9E-20 134.4 15.8 108 83-208 48-170 (302)
107 3evz_A Methyltransferase; NYSG 99.7 4.9E-15 1.7E-19 125.3 18.5 136 81-278 53-209 (230)
108 3q87_B N6 adenine specific DNA 99.7 1.2E-15 4E-20 123.7 13.9 130 82-286 22-160 (170)
109 1fbn_A MJ fibrillarin homologu 99.7 1.4E-15 5E-20 129.0 15.0 104 76-206 67-177 (230)
110 3fpf_A Mtnas, putative unchara 99.7 5.1E-15 1.8E-19 129.4 18.3 107 77-207 116-222 (298)
111 1l3i_A Precorrin-6Y methyltran 99.7 3.6E-15 1.2E-19 121.8 15.8 116 69-208 19-135 (192)
112 3lpm_A Putative methyltransfer 99.7 3E-15 1E-19 129.3 15.9 139 75-275 40-201 (259)
113 2pxx_A Uncharacterized protein 99.6 1.1E-15 3.6E-20 127.5 12.3 116 71-210 32-162 (215)
114 3mti_A RRNA methylase; SAM-dep 99.6 2.6E-15 9E-20 122.7 14.3 107 82-209 21-137 (185)
115 1yzh_A TRNA (guanine-N(7)-)-me 99.6 5.5E-15 1.9E-19 123.9 16.5 106 83-207 41-156 (214)
116 3mq2_A 16S rRNA methyltransfer 99.6 1.3E-15 4.4E-20 127.9 12.5 111 76-206 20-139 (218)
117 3eey_A Putative rRNA methylase 99.6 2.3E-15 7.7E-20 124.4 13.3 113 81-210 20-142 (197)
118 3mb5_A SAM-dependent methyltra 99.6 3.8E-15 1.3E-19 128.0 15.0 113 72-207 82-194 (255)
119 2fyt_A Protein arginine N-meth 99.6 2.6E-15 8.9E-20 134.9 14.4 117 68-204 49-168 (340)
120 3uwp_A Histone-lysine N-methyl 99.6 2.3E-15 7.8E-20 136.5 13.9 157 38-212 122-293 (438)
121 3r0q_C Probable protein argini 99.6 2.7E-15 9.4E-20 136.6 14.5 141 44-205 24-167 (376)
122 3m33_A Uncharacterized protein 99.6 9.2E-16 3.2E-20 129.8 10.7 119 82-275 47-167 (226)
123 3p2e_A 16S rRNA methylase; met 99.6 2.5E-15 8.7E-20 127.3 12.3 154 82-276 23-186 (225)
124 2fca_A TRNA (guanine-N(7)-)-me 99.6 5.5E-15 1.9E-19 124.1 14.0 106 83-207 38-153 (213)
125 2pwy_A TRNA (adenine-N(1)-)-me 99.6 8E-15 2.7E-19 126.0 15.2 112 73-207 86-198 (258)
126 1yb2_A Hypothetical protein TA 99.6 3.9E-15 1.3E-19 129.8 13.1 111 73-207 100-211 (275)
127 2yxd_A Probable cobalt-precorr 99.6 1.5E-14 5E-19 117.4 15.3 110 70-207 22-131 (183)
128 3p9n_A Possible methyltransfer 99.6 5.3E-15 1.8E-19 121.5 12.7 108 82-209 43-155 (189)
129 3u81_A Catechol O-methyltransf 99.6 5.9E-15 2E-19 124.4 13.0 114 82-213 57-176 (221)
130 3q7e_A Protein arginine N-meth 99.6 4.8E-15 1.6E-19 133.7 13.1 115 70-204 53-170 (349)
131 2ipx_A RRNA 2'-O-methyltransfe 99.6 4.1E-15 1.4E-19 126.3 11.7 107 78-206 72-181 (233)
132 3id6_C Fibrillarin-like rRNA/T 99.6 5.5E-14 1.9E-18 119.3 18.2 111 73-206 63-180 (232)
133 3iv6_A Putative Zn-dependent a 99.6 3.9E-15 1.3E-19 128.6 11.0 136 47-208 12-149 (261)
134 2h00_A Methyltransferase 10 do 99.6 9.6E-15 3.3E-19 125.6 13.1 156 83-278 65-241 (254)
135 1o54_A SAM-dependent O-methylt 99.6 1.5E-14 5.3E-19 126.0 14.3 112 73-207 102-213 (277)
136 2nxc_A L11 mtase, ribosomal pr 99.6 3.9E-14 1.3E-18 122.1 16.6 133 82-283 119-251 (254)
137 3htx_A HEN1; HEN1, small RNA m 99.6 2.8E-14 9.5E-19 138.5 16.7 125 67-210 705-837 (950)
138 3lbf_A Protein-L-isoaspartate 99.6 2.7E-14 9.3E-19 119.0 14.3 112 70-208 64-175 (210)
139 3gdh_A Trimethylguanosine synt 99.6 1.8E-15 6.3E-20 128.9 6.9 101 83-204 78-178 (241)
140 2y1w_A Histone-arginine methyl 99.6 5.1E-14 1.8E-18 126.9 16.3 116 69-205 36-153 (348)
141 2frn_A Hypothetical protein PH 99.6 1.5E-13 5E-18 120.1 18.2 137 73-271 117-253 (278)
142 2ozv_A Hypothetical protein AT 99.6 6.1E-14 2.1E-18 121.3 15.5 114 75-206 28-169 (260)
143 3fzg_A 16S rRNA methylase; met 99.6 2.1E-14 7.3E-19 117.0 11.8 114 71-207 39-152 (200)
144 3bwc_A Spermidine synthase; SA 99.6 5E-14 1.7E-18 124.6 14.9 151 82-287 94-257 (304)
145 3lec_A NADB-rossmann superfami 99.6 1.1E-13 3.9E-18 116.8 16.2 147 75-287 15-163 (230)
146 1g8a_A Fibrillarin-like PRE-rR 99.6 1E-13 3.5E-18 117.0 15.9 106 78-206 68-177 (227)
147 1ixk_A Methyltransferase; open 99.6 5.3E-14 1.8E-18 125.1 14.7 120 73-210 108-249 (315)
148 1g6q_1 HnRNP arginine N-methyl 99.6 1.9E-14 6.5E-19 128.7 11.8 115 70-204 25-142 (328)
149 3dxy_A TRNA (guanine-N(7)-)-me 99.6 2E-14 6.7E-19 121.2 11.1 106 83-207 34-150 (218)
150 1nt2_A Fibrillarin-like PRE-rR 99.6 4.9E-14 1.7E-18 118.1 13.2 104 79-206 53-160 (210)
151 2ift_A Putative methylase HI07 99.5 2.2E-14 7.6E-19 119.3 10.4 107 83-208 53-164 (201)
152 1i9g_A Hypothetical protein RV 99.5 1E-13 3.5E-18 120.7 15.1 114 73-208 89-204 (280)
153 2b25_A Hypothetical protein; s 99.5 4.4E-14 1.5E-18 126.6 13.1 114 73-208 95-220 (336)
154 3giw_A Protein of unknown func 99.5 4E-14 1.4E-18 122.4 12.3 163 69-271 63-243 (277)
155 3dr5_A Putative O-methyltransf 99.5 9.6E-14 3.3E-18 117.2 14.3 115 72-205 45-161 (221)
156 3ntv_A MW1564 protein; rossman 99.5 8.9E-14 3.1E-18 118.1 14.0 112 74-206 62-175 (232)
157 3kr9_A SAM-dependent methyltra 99.5 2.4E-13 8.1E-18 114.7 16.0 145 75-286 9-156 (225)
158 2yxe_A Protein-L-isoaspartate 99.5 1.7E-13 5.7E-18 114.6 15.1 114 71-208 65-178 (215)
159 3tm4_A TRNA (guanine N2-)-meth 99.5 2.7E-13 9.4E-18 123.2 17.7 152 69-286 204-363 (373)
160 3gnl_A Uncharacterized protein 99.5 2.2E-13 7.4E-18 116.0 15.9 147 74-286 14-162 (244)
161 3tma_A Methyltransferase; thum 99.5 2.2E-13 7.5E-18 122.9 16.5 120 69-206 189-316 (354)
162 2esr_A Methyltransferase; stru 99.5 3.6E-14 1.2E-18 115.1 10.0 117 73-209 20-140 (177)
163 4dcm_A Ribosomal RNA large sub 99.5 1.3E-13 4.6E-18 125.3 14.7 123 71-211 210-338 (375)
164 3tfw_A Putative O-methyltransf 99.5 4E-13 1.4E-17 115.3 16.8 108 81-208 61-171 (248)
165 1dl5_A Protein-L-isoaspartate 99.5 1.5E-13 5.1E-18 122.2 14.6 114 70-207 62-175 (317)
166 2fhp_A Methylase, putative; al 99.5 7.7E-14 2.6E-18 113.8 11.6 116 73-208 33-155 (187)
167 3dmg_A Probable ribosomal RNA 99.5 1.9E-13 6.6E-18 124.4 15.2 116 73-210 221-343 (381)
168 1u2z_A Histone-lysine N-methyl 99.5 1.8E-13 6E-18 126.1 14.9 123 70-210 229-362 (433)
169 4hc4_A Protein arginine N-meth 99.5 9.1E-14 3.1E-18 125.9 12.4 116 68-204 68-186 (376)
170 2fpo_A Methylase YHHF; structu 99.5 8.8E-14 3E-18 115.7 11.2 105 83-208 54-161 (202)
171 1vbf_A 231AA long hypothetical 99.5 3.2E-13 1.1E-17 114.1 14.6 111 70-209 57-167 (231)
172 2pjd_A Ribosomal RNA small sub 99.5 1.4E-13 4.8E-18 123.7 12.8 120 70-211 183-307 (343)
173 2gpy_A O-methyltransferase; st 99.5 1E-13 3.5E-18 117.6 10.9 115 73-208 44-161 (233)
174 1af7_A Chemotaxis receptor met 99.5 2.6E-13 8.8E-18 118.1 13.4 110 83-205 105-250 (274)
175 3bzb_A Uncharacterized protein 99.5 5.1E-13 1.8E-17 116.8 15.0 116 73-206 69-204 (281)
176 3ckk_A TRNA (guanine-N(7)-)-me 99.5 1.7E-13 5.8E-18 116.8 11.5 107 82-207 45-168 (235)
177 2ld4_A Anamorsin; methyltransf 99.5 1.8E-13 6.2E-18 110.9 11.1 90 78-206 7-100 (176)
178 1ej0_A FTSJ; methyltransferase 99.5 3.3E-13 1.1E-17 108.4 12.6 108 81-217 20-146 (180)
179 1p91_A Ribosomal RNA large sub 99.5 5E-13 1.7E-17 115.6 14.1 99 82-211 84-182 (269)
180 1i1n_A Protein-L-isoaspartate 99.5 9.8E-13 3.3E-17 110.8 15.3 114 74-209 66-184 (226)
181 1o9g_A RRNA methyltransferase; 99.5 1.3E-13 4.5E-18 118.2 10.0 118 74-209 42-216 (250)
182 3hp7_A Hemolysin, putative; st 99.5 2.9E-13 9.9E-18 118.3 12.0 151 75-274 76-231 (291)
183 3tr6_A O-methyltransferase; ce 99.5 2.2E-13 7.6E-18 114.6 10.9 107 82-208 63-175 (225)
184 3c3p_A Methyltransferase; NP_9 99.5 3.4E-13 1.2E-17 112.5 11.8 104 83-207 56-160 (210)
185 3r3h_A O-methyltransferase, SA 99.5 4.6E-14 1.6E-18 120.8 6.3 107 82-208 59-171 (242)
186 3duw_A OMT, O-methyltransferas 99.5 2.7E-13 9.3E-18 114.0 10.8 107 81-207 56-167 (223)
187 2yvl_A TRMI protein, hypotheti 99.5 9E-13 3.1E-17 112.4 14.1 111 73-208 81-191 (248)
188 2yxl_A PH0851 protein, 450AA l 99.5 1.6E-12 5.5E-17 121.0 16.8 121 73-211 249-393 (450)
189 3sso_A Methyltransferase; macr 99.5 1.7E-13 5.8E-18 124.0 9.6 107 74-209 208-326 (419)
190 1jg1_A PIMT;, protein-L-isoasp 99.4 1.1E-12 3.9E-17 111.3 14.0 111 71-208 79-190 (235)
191 1ws6_A Methyltransferase; stru 99.4 1.4E-13 4.7E-18 110.5 7.6 104 83-210 41-150 (171)
192 1sui_A Caffeoyl-COA O-methyltr 99.4 6.9E-13 2.4E-17 113.8 11.3 106 82-207 78-190 (247)
193 3adn_A Spermidine synthase; am 99.4 3.7E-12 1.3E-16 112.0 15.6 108 83-207 83-198 (294)
194 3b3j_A Histone-arginine methyl 99.4 6.4E-13 2.2E-17 124.5 11.4 115 70-205 145-261 (480)
195 3ajd_A Putative methyltransfer 99.4 2.6E-12 8.8E-17 111.9 14.3 118 75-210 75-214 (274)
196 1nv8_A HEMK protein; class I a 99.4 1.7E-12 5.7E-17 113.7 12.9 115 70-205 110-247 (284)
197 2igt_A SAM dependent methyltra 99.4 2E-12 6.9E-17 115.6 13.7 115 74-207 143-272 (332)
198 1r18_A Protein-L-isoaspartate( 99.4 1.9E-12 6.5E-17 109.3 12.9 116 72-207 71-194 (227)
199 2pbf_A Protein-L-isoaspartate 99.4 1.8E-12 6.2E-17 109.2 12.7 117 73-207 68-193 (227)
200 2vdv_E TRNA (guanine-N(7)-)-me 99.4 2E-12 7E-17 110.6 12.9 107 82-207 48-173 (246)
201 2bm8_A Cephalosporin hydroxyla 99.4 9.3E-13 3.2E-17 112.2 10.6 100 83-208 81-188 (236)
202 3cbg_A O-methyltransferase; cy 99.4 1.2E-12 4.2E-17 111.1 11.0 106 83-208 72-183 (232)
203 3opn_A Putative hemolysin; str 99.4 4.7E-13 1.6E-17 113.8 8.4 151 76-275 29-184 (232)
204 3c3y_A Pfomt, O-methyltransfer 99.4 1.9E-12 6.6E-17 110.3 11.4 105 82-206 69-180 (237)
205 1sqg_A SUN protein, FMU protei 99.4 7.5E-12 2.6E-16 115.8 16.2 121 71-211 234-378 (429)
206 2plw_A Ribosomal RNA methyltra 99.4 2.8E-12 9.6E-17 105.9 12.0 103 81-212 20-159 (201)
207 3gjy_A Spermidine synthase; AP 99.4 6.3E-12 2.2E-16 111.1 14.7 110 84-212 90-205 (317)
208 3a27_A TYW2, uncharacterized p 99.4 3.4E-12 1.2E-16 111.1 12.8 106 81-210 117-222 (272)
209 2hnk_A SAM-dependent O-methylt 99.4 1E-12 3.4E-17 112.0 9.1 111 77-207 54-181 (239)
210 1inl_A Spermidine synthase; be 99.4 8.5E-12 2.9E-16 109.8 15.3 107 83-206 90-204 (296)
211 2qm3_A Predicted methyltransfe 99.4 8.1E-12 2.8E-16 113.5 15.6 107 82-209 171-279 (373)
212 2avd_A Catechol-O-methyltransf 99.4 1.4E-12 4.8E-17 110.0 9.7 106 82-207 68-179 (229)
213 1iy9_A Spermidine synthase; ro 99.4 1.1E-11 3.8E-16 108.0 15.5 107 83-206 75-188 (275)
214 2pt6_A Spermidine synthase; tr 99.4 9.6E-12 3.3E-16 110.7 14.9 108 83-207 116-230 (321)
215 1wy7_A Hypothetical protein PH 99.4 2E-11 6.8E-16 101.3 15.8 94 80-197 46-141 (207)
216 3m4x_A NOL1/NOP2/SUN family pr 99.4 4.7E-12 1.6E-16 117.5 12.9 120 74-211 96-238 (456)
217 3m6w_A RRNA methylase; rRNA me 99.4 6.1E-12 2.1E-16 116.8 13.2 118 74-210 92-232 (464)
218 2frx_A Hypothetical protein YE 99.3 1.2E-11 4.2E-16 115.7 14.5 118 75-210 107-249 (479)
219 1xj5_A Spermidine synthase 1; 99.3 1E-11 3.5E-16 111.1 12.9 108 82-206 119-234 (334)
220 1ne2_A Hypothetical protein TA 99.3 3.5E-11 1.2E-15 99.3 15.3 90 80-197 48-139 (200)
221 2b2c_A Spermidine synthase; be 99.3 1.2E-11 4E-16 109.8 12.9 107 83-206 108-221 (314)
222 2i7c_A Spermidine synthase; tr 99.3 2.5E-11 8.6E-16 106.1 14.8 108 82-206 77-191 (283)
223 3k6r_A Putative transferase PH 99.3 7.9E-11 2.7E-15 102.4 17.4 111 72-208 116-226 (278)
224 4azs_A Methyltransferase WBDD; 99.3 2.5E-12 8.5E-17 123.1 7.7 107 83-210 66-176 (569)
225 1mjf_A Spermidine synthase; sp 99.3 4E-11 1.4E-15 104.7 14.4 104 83-206 75-192 (281)
226 2f8l_A Hypothetical protein LM 99.3 7.8E-11 2.7E-15 105.8 16.2 149 43-207 85-256 (344)
227 2o07_A Spermidine synthase; st 99.3 6.5E-12 2.2E-16 111.0 8.9 109 82-207 94-209 (304)
228 2nyu_A Putative ribosomal RNA 99.3 2.3E-11 7.8E-16 99.9 11.5 111 81-212 20-150 (196)
229 1uir_A Polyamine aminopropyltr 99.3 8.3E-12 2.8E-16 110.8 9.5 108 83-207 77-195 (314)
230 1zq9_A Probable dimethyladenos 99.3 2.8E-11 9.5E-16 106.0 12.2 114 69-204 14-144 (285)
231 3lcv_B Sisomicin-gentamicin re 99.3 5.7E-11 2E-15 101.2 13.3 111 73-207 124-236 (281)
232 2wa2_A Non-structural protein 99.3 6.1E-12 2.1E-16 109.6 7.2 112 77-214 76-199 (276)
233 2yx1_A Hypothetical protein MJ 99.3 4.2E-11 1.4E-15 107.2 12.9 100 83-210 195-294 (336)
234 2cmg_A Spermidine synthase; tr 99.3 3.5E-11 1.2E-15 104.1 11.3 97 83-206 72-170 (262)
235 3c0k_A UPF0064 protein YCCW; P 99.3 1.6E-10 5.6E-15 105.7 16.4 110 82-210 219-342 (396)
236 2xyq_A Putative 2'-O-methyl tr 99.2 5.1E-11 1.7E-15 104.2 12.2 97 78-208 58-172 (290)
237 3dou_A Ribosomal RNA large sub 99.2 2.3E-11 7.9E-16 100.2 9.5 102 81-214 23-146 (191)
238 2b78_A Hypothetical protein SM 99.2 3.1E-11 1.1E-15 110.1 11.2 111 82-210 211-334 (385)
239 2oxt_A Nucleoside-2'-O-methylt 99.2 8.2E-12 2.8E-16 108.2 6.7 114 75-214 66-191 (265)
240 4dmg_A Putative uncharacterize 99.2 2.1E-10 7.1E-15 104.7 16.3 107 83-211 214-330 (393)
241 2okc_A Type I restriction enzy 99.2 2.5E-10 8.6E-15 106.0 15.7 161 43-208 129-308 (445)
242 3v97_A Ribosomal RNA large sub 99.2 6.5E-11 2.2E-15 115.7 12.1 108 83-208 539-658 (703)
243 2as0_A Hypothetical protein PH 99.2 6.4E-11 2.2E-15 108.4 11.2 110 83-211 217-339 (396)
244 1uwv_A 23S rRNA (uracil-5-)-me 99.2 4E-10 1.4E-14 104.3 15.7 111 70-205 273-387 (433)
245 1wxx_A TT1595, hypothetical pr 99.2 9E-11 3.1E-15 106.9 10.9 108 83-211 209-329 (382)
246 2h1r_A Dimethyladenosine trans 99.1 1.6E-10 5.5E-15 101.8 10.3 110 69-201 28-153 (299)
247 3gru_A Dimethyladenosine trans 99.1 3.2E-10 1.1E-14 99.5 11.4 90 69-181 36-125 (295)
248 3frh_A 16S rRNA methylase; met 99.1 2.6E-09 8.8E-14 90.2 15.3 102 82-207 104-206 (253)
249 2p41_A Type II methyltransfera 99.1 1E-10 3.6E-15 103.2 6.9 104 81-210 80-194 (305)
250 2b9e_A NOL1/NOP2/SUN domain fa 99.1 3.7E-09 1.3E-13 93.4 16.3 118 74-210 93-237 (309)
251 1qam_A ERMC' methyltransferase 99.1 9.8E-10 3.3E-14 93.9 12.2 89 68-180 15-104 (244)
252 3b5i_A S-adenosyl-L-methionine 99.1 7.7E-09 2.6E-13 93.4 17.7 185 84-276 53-299 (374)
253 2ih2_A Modification methylase 99.0 9.4E-10 3.2E-14 101.1 11.5 111 70-208 26-165 (421)
254 3ldu_A Putative methylase; str 99.0 1.9E-09 6.4E-14 98.2 13.3 137 70-208 182-345 (385)
255 3k0b_A Predicted N6-adenine-sp 99.0 3.6E-09 1.2E-13 96.6 14.8 137 70-208 188-351 (393)
256 3ldg_A Putative uncharacterize 99.0 3.7E-09 1.3E-13 96.1 14.9 137 70-208 181-344 (384)
257 2jjq_A Uncharacterized RNA met 99.0 7E-09 2.4E-13 95.6 14.1 98 82-206 289-386 (425)
258 3tqs_A Ribosomal RNA small sub 99.0 1.8E-09 6.3E-14 92.8 9.3 88 69-180 15-106 (255)
259 3fut_A Dimethyladenosine trans 99.0 2.7E-09 9.2E-14 92.5 10.4 90 68-182 32-122 (271)
260 1yub_A Ermam, rRNA methyltrans 99.0 7.3E-11 2.5E-15 100.9 0.3 111 71-205 17-143 (245)
261 2ar0_A M.ecoki, type I restric 98.9 4.9E-09 1.7E-13 99.5 11.7 136 70-207 156-312 (541)
262 3bt7_A TRNA (uracil-5-)-methyl 98.9 5E-09 1.7E-13 94.9 10.9 112 70-209 201-328 (369)
263 2efj_A 3,7-dimethylxanthine me 98.9 1.6E-08 5.5E-13 91.4 13.9 175 84-275 53-292 (384)
264 2qfm_A Spermine synthase; sper 98.9 8.3E-09 2.8E-13 92.3 11.7 110 83-210 188-317 (364)
265 3axs_A Probable N(2),N(2)-dime 98.8 9.3E-09 3.2E-13 93.5 9.9 104 82-206 51-157 (392)
266 1m6y_A S-adenosyl-methyltransf 98.8 7.2E-09 2.4E-13 91.2 8.9 87 73-179 16-107 (301)
267 3khk_A Type I restriction-modi 98.8 2E-08 6.8E-13 95.3 12.3 135 69-207 231-395 (544)
268 2dul_A N(2),N(2)-dimethylguano 98.8 9.8E-09 3.4E-13 93.2 9.7 101 83-206 47-163 (378)
269 3v97_A Ribosomal RNA large sub 98.8 1.1E-07 3.9E-12 92.8 17.7 133 69-206 176-346 (703)
270 4gqb_A Protein arginine N-meth 98.8 4.6E-08 1.6E-12 93.7 13.5 105 84-204 358-464 (637)
271 3uzu_A Ribosomal RNA small sub 98.8 2E-08 6.9E-13 87.4 9.8 90 68-179 27-123 (279)
272 1m6e_X S-adenosyl-L-methionnin 98.8 4.3E-08 1.5E-12 87.9 11.9 178 83-275 51-280 (359)
273 3lkd_A Type I restriction-modi 98.8 7E-08 2.4E-12 91.4 12.8 124 70-207 204-358 (542)
274 3ftd_A Dimethyladenosine trans 98.8 4.9E-08 1.7E-12 83.6 10.8 88 69-180 17-105 (249)
275 2qy6_A UPF0209 protein YFCK; s 98.8 8.1E-08 2.8E-12 82.5 12.1 114 82-205 59-211 (257)
276 2r6z_A UPF0341 protein in RSP 98.7 4.4E-09 1.5E-13 90.6 3.1 86 77-182 77-173 (258)
277 1qyr_A KSGA, high level kasuga 98.7 1.7E-08 5.7E-13 86.6 6.4 89 69-180 7-100 (252)
278 3o4f_A Spermidine synthase; am 98.7 3.7E-07 1.3E-11 79.5 13.5 109 82-207 82-198 (294)
279 3cvo_A Methyltransferase-like 98.6 7E-07 2.4E-11 73.6 13.2 96 84-205 31-152 (202)
280 3evf_A RNA-directed RNA polyme 98.6 6.9E-08 2.4E-12 82.7 6.7 113 75-209 66-186 (277)
281 3ua3_A Protein arginine N-meth 98.6 2.2E-07 7.5E-12 89.2 10.7 114 84-204 410-531 (745)
282 4fzv_A Putative methyltransfer 98.5 5.5E-07 1.9E-11 80.9 11.6 122 73-211 138-288 (359)
283 2oyr_A UPF0341 protein YHIQ; a 98.5 9.2E-08 3.1E-12 82.2 6.2 108 73-201 76-194 (258)
284 3ll7_A Putative methyltransfer 98.5 9.4E-08 3.2E-12 87.2 5.9 77 83-180 93-173 (410)
285 3ufb_A Type I restriction-modi 98.4 6.3E-06 2.2E-10 77.9 16.4 161 42-208 175-363 (530)
286 3gcz_A Polyprotein; flavivirus 98.4 3.9E-07 1.3E-11 78.2 6.6 113 75-209 82-203 (282)
287 3s1s_A Restriction endonucleas 98.3 4.6E-06 1.6E-10 81.3 13.3 112 82-207 320-465 (878)
288 2wk1_A NOVP; transferase, O-me 98.3 3.1E-06 1E-10 73.5 11.0 110 82-205 105-242 (282)
289 4auk_A Ribosomal RNA large sub 98.2 1.6E-05 5.6E-10 71.1 13.6 96 81-208 209-307 (375)
290 3c6k_A Spermine synthase; sper 98.2 1.4E-05 4.9E-10 71.7 11.5 107 82-206 204-330 (381)
291 1wg8_A Predicted S-adenosylmet 98.2 8.6E-06 2.9E-10 70.2 9.6 83 72-179 11-98 (285)
292 2vz8_A Fatty acid synthase; tr 98.1 1E-06 3.4E-11 96.6 2.6 154 82-274 1239-1394(2512)
293 3eld_A Methyltransferase; flav 98.1 1.4E-05 4.7E-10 69.1 9.0 106 82-209 80-193 (300)
294 2k4m_A TR8_protein, UPF0146 pr 97.9 4.6E-05 1.6E-09 59.0 8.8 85 84-208 36-122 (153)
295 2px2_A Genome polyprotein [con 97.8 7.2E-05 2.5E-09 63.2 9.1 110 74-209 64-185 (269)
296 3lkz_A Non-structural protein 97.8 0.00018 6.3E-09 61.9 11.3 114 74-210 85-207 (321)
297 3p8z_A Mtase, non-structural p 97.7 0.00017 5.9E-09 60.1 9.7 113 74-210 69-189 (267)
298 3vyw_A MNMC2; tRNA wobble urid 97.7 0.00043 1.5E-08 60.4 12.2 76 154-275 168-248 (308)
299 3tka_A Ribosomal RNA small sub 97.6 0.00016 5.4E-09 63.8 8.5 85 73-179 47-137 (347)
300 1rjd_A PPM1P, carboxy methyl t 97.6 0.001 3.5E-08 59.0 13.3 153 82-268 96-281 (334)
301 2zig_A TTHA0409, putative modi 97.4 0.00049 1.7E-08 60.0 9.1 57 71-147 224-280 (297)
302 3r24_A NSP16, 2'-O-methyl tran 97.3 0.0019 6.4E-08 55.7 10.5 108 80-221 106-231 (344)
303 1i4w_A Mitochondrial replicati 97.1 0.0014 4.8E-08 58.5 8.4 72 71-164 40-117 (353)
304 1g60_A Adenine-specific methyl 96.7 0.004 1.4E-07 53.1 7.9 55 73-147 203-257 (260)
305 2oo3_A Protein involved in cat 96.7 0.0015 5E-08 56.3 4.5 99 84-205 92-196 (283)
306 3iei_A Leucine carboxyl methyl 96.7 0.31 1.1E-05 42.9 19.8 159 83-275 90-281 (334)
307 3tos_A CALS11; methyltransfera 96.6 0.039 1.3E-06 46.8 12.8 115 84-210 70-220 (257)
308 2uyo_A Hypothetical protein ML 96.3 0.1 3.5E-06 45.6 13.9 103 85-206 104-217 (310)
309 1f8f_A Benzyl alcohol dehydrog 96.1 0.04 1.4E-06 49.1 10.6 100 77-208 184-290 (371)
310 3pvc_A TRNA 5-methylaminomethy 95.9 0.054 1.8E-06 52.6 11.7 116 83-204 58-208 (689)
311 3ps9_A TRNA 5-methylaminomethy 95.4 0.15 5E-06 49.4 12.2 116 83-204 66-216 (676)
312 2dph_A Formaldehyde dismutase; 95.4 0.078 2.7E-06 47.8 9.7 105 77-208 179-300 (398)
313 3g7u_A Cytosine-specific methy 95.3 0.14 4.7E-06 46.0 11.0 74 85-183 3-84 (376)
314 3two_A Mannitol dehydrogenase; 95.1 0.16 5.5E-06 44.7 10.9 95 78-208 171-266 (348)
315 3fpc_A NADP-dependent alcohol 95.0 0.11 3.7E-06 45.9 9.2 100 77-208 160-267 (352)
316 2py6_A Methyltransferase FKBM; 95.0 0.075 2.6E-06 48.3 8.3 64 81-161 224-291 (409)
317 4ej6_A Putative zinc-binding d 95.0 0.2 6.9E-06 44.6 11.1 100 77-208 176-285 (370)
318 1pl8_A Human sorbitol dehydrog 94.9 0.12 3.9E-06 45.8 9.3 100 77-208 165-274 (356)
319 4a2c_A Galactitol-1-phosphate 94.9 0.42 1.4E-05 41.8 12.8 105 76-211 153-264 (346)
320 1pqw_A Polyketide synthase; ro 94.8 0.19 6.5E-06 40.2 9.5 98 77-207 32-137 (198)
321 3qv2_A 5-cytosine DNA methyltr 94.8 0.23 7.7E-06 43.7 10.6 76 84-183 10-89 (327)
322 3s2e_A Zinc-containing alcohol 94.6 0.18 6E-06 44.2 9.7 100 77-208 160-264 (340)
323 1kol_A Formaldehyde dehydrogen 94.5 0.25 8.5E-06 44.3 10.6 103 78-207 180-300 (398)
324 1g55_A DNA cytosine methyltran 94.4 0.05 1.7E-06 48.2 5.4 76 85-183 3-81 (343)
325 3uko_A Alcohol dehydrogenase c 94.2 0.21 7.1E-06 44.6 9.4 102 75-208 185-296 (378)
326 1p0f_A NADP-dependent alcohol 94.2 0.3 1E-05 43.4 10.3 100 77-208 185-294 (373)
327 3goh_A Alcohol dehydrogenase, 94.2 0.23 7.9E-06 43.0 9.3 92 77-206 136-228 (315)
328 3m6i_A L-arabinitol 4-dehydrog 94.2 0.45 1.5E-05 42.0 11.4 102 77-208 173-284 (363)
329 1e3j_A NADP(H)-dependent ketos 94.1 0.38 1.3E-05 42.3 10.7 100 77-208 162-272 (352)
330 1uuf_A YAHK, zinc-type alcohol 94.0 0.42 1.4E-05 42.5 10.9 98 79-208 190-289 (369)
331 2fzw_A Alcohol dehydrogenase c 93.9 0.4 1.4E-05 42.5 10.6 100 77-208 184-293 (373)
332 3uog_A Alcohol dehydrogenase; 93.9 0.44 1.5E-05 42.2 10.7 100 77-209 183-289 (363)
333 3gms_A Putative NADPH:quinone 93.9 0.44 1.5E-05 41.7 10.7 101 75-208 136-244 (340)
334 1zkd_A DUF185; NESG, RPR58, st 93.6 0.82 2.8E-05 41.0 11.9 58 79-146 76-133 (387)
335 1cdo_A Alcohol dehydrogenase; 93.6 0.36 1.2E-05 42.9 9.7 100 77-208 186-295 (374)
336 1e3i_A Alcohol dehydrogenase, 93.6 0.35 1.2E-05 42.9 9.7 101 76-208 188-298 (376)
337 2jhf_A Alcohol dehydrogenase E 93.6 0.45 1.5E-05 42.2 10.2 100 77-208 185-294 (374)
338 2zwa_A Leucine carboxyl methyl 93.6 2.3 7.8E-05 41.1 15.9 165 83-275 107-309 (695)
339 3jyn_A Quinone oxidoreductase; 93.5 0.59 2E-05 40.6 10.8 99 77-208 134-240 (325)
340 1boo_A Protein (N-4 cytosine-s 93.4 0.18 6.2E-06 44.1 7.2 56 73-148 243-298 (323)
341 2c7p_A Modification methylase 93.2 0.3 1E-05 42.9 8.3 73 84-183 11-84 (327)
342 4dvj_A Putative zinc-dependent 93.2 0.77 2.6E-05 40.6 11.1 93 83-206 171-269 (363)
343 4b7c_A Probable oxidoreductase 93.1 0.57 1.9E-05 40.8 10.0 102 75-208 141-249 (336)
344 1eg2_A Modification methylase 93.1 0.22 7.4E-06 43.6 7.2 57 71-147 231-290 (319)
345 3qwb_A Probable quinone oxidor 93.1 0.58 2E-05 40.7 10.1 99 77-208 142-248 (334)
346 3ip1_A Alcohol dehydrogenase, 93.1 0.77 2.6E-05 41.2 11.1 99 80-209 210-320 (404)
347 2h6e_A ADH-4, D-arabinose 1-de 93.0 0.32 1.1E-05 42.6 8.3 97 80-208 168-270 (344)
348 1v3u_A Leukotriene B4 12- hydr 92.9 0.66 2.3E-05 40.3 10.2 96 77-207 139-244 (333)
349 2d8a_A PH0655, probable L-thre 92.9 0.57 2E-05 41.1 9.8 99 77-208 162-268 (348)
350 1vj0_A Alcohol dehydrogenase, 92.7 0.43 1.5E-05 42.6 8.7 101 77-208 188-299 (380)
351 4eye_A Probable oxidoreductase 92.7 0.62 2.1E-05 40.8 9.7 97 77-207 153-257 (342)
352 3jv7_A ADH-A; dehydrogenase, n 92.5 0.6 2.1E-05 40.9 9.3 98 80-208 168-271 (345)
353 1jvb_A NAD(H)-dependent alcoho 92.3 0.57 2E-05 41.1 9.0 100 78-208 165-272 (347)
354 3fwz_A Inner membrane protein 92.3 2.7 9.2E-05 31.4 12.9 92 84-205 7-103 (140)
355 3fbg_A Putative arginate lyase 92.2 0.98 3.4E-05 39.5 10.3 92 83-206 150-247 (346)
356 1rjw_A ADH-HT, alcohol dehydro 92.0 0.75 2.6E-05 40.2 9.3 94 80-208 161-262 (339)
357 2zig_A TTHA0409, putative modi 92.0 0.19 6.4E-06 43.4 5.2 55 152-206 20-96 (297)
358 2b5w_A Glucose dehydrogenase; 92.0 0.42 1.4E-05 42.2 7.6 90 85-208 174-274 (357)
359 1piw_A Hypothetical zinc-type 91.8 0.67 2.3E-05 40.9 8.8 98 79-207 175-276 (360)
360 2c0c_A Zinc binding alcohol de 91.7 1.4 4.7E-05 38.9 10.7 99 77-208 157-262 (362)
361 2j3h_A NADP-dependent oxidored 91.4 1.4 4.6E-05 38.5 10.4 99 77-207 149-255 (345)
362 2hcy_A Alcohol dehydrogenase 1 91.4 0.71 2.4E-05 40.4 8.5 99 78-208 164-270 (347)
363 3tqh_A Quinone oxidoreductase; 91.4 1.5 5.1E-05 37.9 10.5 96 77-206 146-244 (321)
364 2eih_A Alcohol dehydrogenase; 91.3 1.9 6.6E-05 37.5 11.3 96 79-207 162-265 (343)
365 1qor_A Quinone oxidoreductase; 91.3 1.1 3.9E-05 38.7 9.7 98 78-208 135-240 (327)
366 1yb5_A Quinone oxidoreductase; 91.2 1.3 4.5E-05 38.9 10.1 98 77-207 164-269 (351)
367 4eez_A Alcohol dehydrogenase 1 91.2 1.9 6.5E-05 37.5 11.1 104 77-208 157-264 (348)
368 4dup_A Quinone oxidoreductase; 91.0 1 3.5E-05 39.5 9.2 99 77-208 161-266 (353)
369 3nx4_A Putative oxidoreductase 91.0 1.8 6.1E-05 37.3 10.6 90 86-208 149-242 (324)
370 4h0n_A DNMT2; SAH binding, tra 90.7 0.46 1.6E-05 41.8 6.5 76 85-183 4-82 (333)
371 3krt_A Crotonyl COA reductase; 90.3 2.2 7.4E-05 39.0 10.9 96 79-207 224-344 (456)
372 2cf5_A Atccad5, CAD, cinnamyl 90.2 0.67 2.3E-05 40.9 7.2 99 79-208 175-276 (357)
373 4f3n_A Uncharacterized ACR, CO 89.9 1.1 3.7E-05 40.8 8.4 51 84-146 138-188 (432)
374 2qrv_A DNA (cytosine-5)-methyl 89.9 1.2 4.2E-05 38.3 8.4 75 82-180 14-93 (295)
375 2j8z_A Quinone oxidoreductase; 89.8 2.2 7.7E-05 37.3 10.3 99 77-208 156-262 (354)
376 1yqd_A Sinapyl alcohol dehydro 89.7 1.1 3.7E-05 39.7 8.2 99 79-208 182-283 (366)
377 1boo_A Protein (N-4 cytosine-s 89.7 0.34 1.2E-05 42.4 4.7 55 152-206 13-83 (323)
378 2zb4_A Prostaglandin reductase 89.6 2.2 7.7E-05 37.3 10.2 99 77-207 152-260 (357)
379 1wly_A CAAR, 2-haloacrylate re 89.6 2.1 7.2E-05 37.1 9.9 98 78-208 140-245 (333)
380 2dq4_A L-threonine 3-dehydroge 89.3 0.14 4.8E-06 45.0 2.0 97 78-208 160-263 (343)
381 3ubt_Y Modification methylase 88.9 1.4 4.9E-05 38.1 8.3 73 85-183 1-74 (331)
382 1g60_A Adenine-specific methyl 88.8 0.7 2.4E-05 38.9 6.0 53 154-206 5-73 (260)
383 2cdc_A Glucose dehydrogenase g 88.6 2.6 8.9E-05 37.1 9.9 92 84-208 181-279 (366)
384 1iz0_A Quinone oxidoreductase; 88.3 0.77 2.6E-05 39.3 6.0 93 81-207 123-218 (302)
385 3llv_A Exopolyphosphatase-rela 87.9 6.5 0.00022 29.0 11.3 92 84-205 6-101 (141)
386 3gaz_A Alcohol dehydrogenase s 87.1 3.4 0.00012 36.0 9.6 94 77-206 144-245 (343)
387 3me5_A Cytosine-specific methy 87.0 1.2 4E-05 41.3 6.6 78 84-183 88-182 (482)
388 3ek2_A Enoyl-(acyl-carrier-pro 86.1 8.3 0.00028 31.8 11.2 108 82-208 12-154 (271)
389 3ius_A Uncharacterized conserv 86.1 13 0.00046 30.7 13.7 94 85-206 6-101 (286)
390 1tt7_A YHFP; alcohol dehydroge 86.0 4.4 0.00015 34.9 9.7 97 79-208 145-248 (330)
391 1pjc_A Protein (L-alanine dehy 86.0 0.78 2.7E-05 40.7 4.8 99 84-206 167-266 (361)
392 3c85_A Putative glutathione-re 85.6 5.7 0.00019 30.9 9.4 94 84-206 39-138 (183)
393 3p2y_A Alanine dehydrogenase/p 85.6 0.6 2.1E-05 41.8 3.8 42 83-142 183-225 (381)
394 2vhw_A Alanine dehydrogenase; 85.0 0.64 2.2E-05 41.5 3.8 100 83-206 167-267 (377)
395 4dcm_A Ribosomal RNA large sub 84.6 18 0.00061 32.0 13.1 102 83-210 38-139 (375)
396 2vn8_A Reticulon-4-interacting 84.6 4.4 0.00015 35.7 9.1 94 81-206 181-279 (375)
397 1xa0_A Putative NADPH dependen 84.1 4.3 0.00015 34.9 8.7 99 79-207 144-246 (328)
398 3gqv_A Enoyl reductase; medium 84.0 5.1 0.00018 35.3 9.3 93 82-207 163-263 (371)
399 4a0s_A Octenoyl-COA reductase/ 83.8 6.6 0.00023 35.5 10.1 99 79-207 216-336 (447)
400 3ioy_A Short-chain dehydrogena 83.1 14 0.00049 31.6 11.6 81 83-180 7-97 (319)
401 4dio_A NAD(P) transhydrogenase 83.1 0.75 2.6E-05 41.5 3.3 42 83-142 189-231 (405)
402 2eez_A Alanine dehydrogenase; 83.0 0.94 3.2E-05 40.3 4.0 100 83-206 165-265 (369)
403 3h7a_A Short chain dehydrogena 82.9 18 0.0006 29.7 11.7 77 84-180 7-93 (252)
404 3iht_A S-adenosyl-L-methionine 82.7 3.6 0.00012 31.9 6.4 106 73-205 31-145 (174)
405 3grk_A Enoyl-(acyl-carrier-pro 82.6 14 0.00048 31.1 11.2 107 83-208 30-170 (293)
406 4eso_A Putative oxidoreductase 82.2 12 0.00041 30.8 10.4 103 83-207 7-138 (255)
407 3l9w_A Glutathione-regulated p 81.9 6.6 0.00023 35.4 9.2 93 84-205 4-100 (413)
408 3k31_A Enoyl-(acyl-carrier-pro 81.7 9.7 0.00033 32.2 9.8 107 83-208 29-169 (296)
409 3o26_A Salutaridine reductase; 81.2 14 0.00048 30.9 10.7 80 84-181 12-102 (311)
410 3oig_A Enoyl-[acyl-carrier-pro 81.1 21 0.00071 29.3 11.6 109 83-208 6-148 (266)
411 3tjr_A Short chain dehydrogena 80.9 15 0.00052 31.0 10.9 80 82-180 29-118 (301)
412 4fs3_A Enoyl-[acyl-carrier-pro 80.5 20 0.00067 29.6 11.2 109 83-208 5-147 (256)
413 1gu7_A Enoyl-[acyl-carrier-pro 80.2 4.2 0.00014 35.6 7.2 97 79-208 162-276 (364)
414 3pxx_A Carveol dehydrogenase; 80.1 20 0.0007 29.7 11.3 106 83-207 9-153 (287)
415 1lss_A TRK system potassium up 79.9 15 0.0005 26.6 12.5 93 84-205 4-100 (140)
416 3l4b_C TRKA K+ channel protien 79.4 21 0.00071 28.5 10.7 92 86-205 2-97 (218)
417 1eg2_A Modification methylase 79.2 1.4 4.9E-05 38.3 3.7 54 153-206 38-105 (319)
418 4fgs_A Probable dehydrogenase 79.0 13 0.00044 31.4 9.5 103 83-207 28-159 (273)
419 3pi7_A NADH oxidoreductase; gr 78.7 5.3 0.00018 34.7 7.3 90 85-207 166-263 (349)
420 1l7d_A Nicotinamide nucleotide 78.7 1.5 5.3E-05 39.1 3.8 42 83-142 171-213 (384)
421 1x13_A NAD(P) transhydrogenase 78.5 1.1 3.8E-05 40.4 2.8 42 83-142 171-213 (401)
422 3ggo_A Prephenate dehydrogenas 77.7 21 0.00071 30.7 10.7 81 126-221 60-140 (314)
423 3o38_A Short chain dehydrogena 77.7 26 0.00088 28.7 11.1 80 83-180 21-111 (266)
424 4g81_D Putative hexonate dehyd 77.6 23 0.00079 29.4 10.7 80 83-181 8-97 (255)
425 1wma_A Carbonyl reductase [NAD 77.4 11 0.00036 31.0 8.6 105 84-206 4-137 (276)
426 3ijr_A Oxidoreductase, short c 77.3 28 0.00097 29.2 11.4 106 83-207 46-182 (291)
427 3edm_A Short chain dehydrogena 77.1 14 0.00046 30.5 9.1 106 83-207 7-143 (259)
428 2gdz_A NAD+-dependent 15-hydro 77.0 26 0.0009 28.7 11.0 107 84-207 7-139 (267)
429 4imr_A 3-oxoacyl-(acyl-carrier 77.0 24 0.00082 29.3 10.8 78 84-180 33-119 (275)
430 4da9_A Short-chain dehydrogena 76.8 20 0.00067 30.0 10.2 80 82-180 27-117 (280)
431 3is3_A 17BETA-hydroxysteroid d 76.2 29 0.001 28.6 11.1 107 83-208 17-153 (270)
432 3ce6_A Adenosylhomocysteinase; 76.2 10 0.00035 35.0 8.7 90 81-207 271-361 (494)
433 3lyl_A 3-oxoacyl-(acyl-carrier 76.1 29 0.001 28.0 11.0 79 84-181 5-93 (247)
434 2km1_A Protein DRE2; yeast, an 76.0 1.8 6.3E-05 32.6 2.9 71 133-205 21-96 (136)
435 1xg5_A ARPG836; short chain de 75.9 30 0.001 28.6 11.1 80 84-180 32-121 (279)
436 2hwk_A Helicase NSP2; rossman 75.8 10 0.00034 32.4 7.6 54 158-212 195-259 (320)
437 1ja9_A 4HNR, 1,3,6,8-tetrahydr 74.8 13 0.00045 30.5 8.5 78 84-180 21-109 (274)
438 2g1u_A Hypothetical protein TM 74.6 14 0.00049 27.7 8.0 96 82-205 17-116 (155)
439 1zsy_A Mitochondrial 2-enoyl t 73.8 43 0.0015 28.9 11.9 98 77-207 161-270 (357)
440 3ksu_A 3-oxoacyl-acyl carrier 73.7 29 0.00098 28.6 10.3 106 83-207 10-147 (262)
441 1id1_A Putative potassium chan 73.6 25 0.00087 26.1 10.1 96 84-205 3-103 (153)
442 3v2g_A 3-oxoacyl-[acyl-carrier 73.0 39 0.0013 28.0 11.4 106 83-207 30-165 (271)
443 3r3s_A Oxidoreductase; structu 72.3 27 0.00091 29.4 9.9 106 84-208 49-186 (294)
444 3t7c_A Carveol dehydrogenase; 71.7 44 0.0015 28.0 11.7 79 83-180 27-127 (299)
445 4egf_A L-xylulose reductase; s 71.2 42 0.0014 27.6 11.0 78 84-180 20-108 (266)
446 4a27_A Synaptic vesicle membra 70.8 10 0.00036 32.8 7.1 98 76-208 135-239 (349)
447 1xhl_A Short-chain dehydrogena 70.0 46 0.0016 27.9 10.9 81 84-180 26-116 (297)
448 3pgx_A Carveol dehydrogenase; 69.9 46 0.0016 27.5 11.2 80 83-181 14-116 (280)
449 3t4x_A Oxidoreductase, short c 69.8 45 0.0015 27.4 11.1 80 84-180 10-95 (267)
450 3u5t_A 3-oxoacyl-[acyl-carrier 69.4 35 0.0012 28.2 9.9 105 84-207 27-161 (267)
451 2f1k_A Prephenate dehydrogenas 69.1 29 0.001 28.7 9.4 65 125-204 24-88 (279)
452 3hwr_A 2-dehydropantoate 2-red 68.9 44 0.0015 28.5 10.7 96 84-207 19-120 (318)
453 4e6p_A Probable sorbitol dehyd 68.9 37 0.0013 27.7 9.9 76 83-180 7-92 (259)
454 3swr_A DNA (cytosine-5)-methyl 68.2 14 0.00047 37.3 8.0 76 83-183 539-631 (1002)
455 3d4o_A Dipicolinate synthase s 67.9 21 0.00072 30.2 8.3 88 82-205 153-242 (293)
456 2pd4_A Enoyl-[acyl-carrier-pro 67.4 38 0.0013 27.9 9.7 106 84-208 6-145 (275)
457 4fn4_A Short chain dehydrogena 66.1 33 0.0011 28.4 9.0 78 83-179 6-93 (254)
458 4g65_A TRK system potassium up 65.8 11 0.00036 34.5 6.2 68 84-176 3-74 (461)
459 2ew2_A 2-dehydropantoate 2-red 65.4 51 0.0017 27.5 10.3 101 85-206 4-107 (316)
460 1qsg_A Enoyl-[acyl-carrier-pro 65.3 55 0.0019 26.7 11.6 106 84-208 9-149 (265)
461 2rir_A Dipicolinate synthase, 64.9 30 0.001 29.2 8.7 89 82-206 155-245 (300)
462 2h7i_A Enoyl-[acyl-carrier-pro 64.4 20 0.00067 29.6 7.3 104 83-207 6-148 (269)
463 3sx2_A Putative 3-ketoacyl-(ac 64.2 49 0.0017 27.2 9.8 80 83-181 12-113 (278)
464 2p91_A Enoyl-[acyl-carrier-pro 64.1 58 0.002 26.9 10.3 79 83-180 20-109 (285)
465 1spx_A Short-chain reductase f 63.4 30 0.001 28.6 8.3 81 84-180 6-96 (278)
466 3rkr_A Short chain oxidoreduct 62.3 41 0.0014 27.5 8.9 79 83-180 28-116 (262)
467 3tsc_A Putative oxidoreductase 62.3 65 0.0022 26.5 11.2 80 83-181 10-112 (277)
468 3gvc_A Oxidoreductase, probabl 62.2 63 0.0021 26.8 10.1 76 84-181 29-114 (277)
469 1h2b_A Alcohol dehydrogenase; 62.1 18 0.00063 31.4 7.0 97 79-208 182-286 (359)
470 3rku_A Oxidoreductase YMR226C; 61.7 70 0.0024 26.7 11.3 83 84-180 33-125 (287)
471 2wyu_A Enoyl-[acyl carrier pro 61.5 36 0.0012 27.8 8.4 78 84-180 8-96 (261)
472 3qiv_A Short-chain dehydrogena 61.0 44 0.0015 26.9 8.8 78 84-180 9-96 (253)
473 1g0o_A Trihydroxynaphthalene r 60.6 70 0.0024 26.4 10.9 105 84-207 29-163 (283)
474 3f9i_A 3-oxoacyl-[acyl-carrier 60.5 64 0.0022 25.9 11.4 77 82-180 12-94 (249)
475 4e21_A 6-phosphogluconate dehy 59.7 20 0.00069 31.5 6.7 91 84-204 22-112 (358)
476 2g5c_A Prephenate dehydrogenas 59.4 52 0.0018 27.2 9.1 66 126-205 28-94 (281)
477 3i6i_A Putative leucoanthocyan 59.3 41 0.0014 28.7 8.7 89 85-195 11-108 (346)
478 3oid_A Enoyl-[acyl-carrier-pro 59.1 72 0.0024 26.0 10.8 78 84-180 4-92 (258)
479 3dmg_A Probable ribosomal RNA 58.6 29 0.001 30.6 7.7 103 75-209 38-141 (381)
480 3c24_A Putative oxidoreductase 58.5 45 0.0015 27.8 8.6 86 85-204 12-98 (286)
481 3ucx_A Short chain dehydrogena 58.5 57 0.0019 26.7 9.1 78 83-179 10-97 (264)
482 1lnq_A MTHK channels, potassiu 58.4 68 0.0023 27.3 9.9 90 84-205 115-209 (336)
483 2x9g_A PTR1, pteridine reducta 57.9 64 0.0022 26.7 9.5 78 84-180 23-116 (288)
484 2aef_A Calcium-gated potassium 56.9 73 0.0025 25.4 10.3 91 84-205 9-103 (234)
485 1zcj_A Peroxisomal bifunctiona 56.4 1.2E+02 0.0039 27.5 11.7 96 85-204 38-147 (463)
486 3d1l_A Putative NADP oxidoredu 56.2 53 0.0018 26.9 8.5 90 84-205 10-100 (266)
487 1jdq_A TM006 protein, hypothet 56.0 49 0.0017 23.1 8.1 32 254-285 65-96 (98)
488 4ft4_B DNA (cytosine-5)-methyl 55.8 25 0.00084 34.3 7.2 50 83-144 211-260 (784)
489 3svt_A Short-chain type dehydr 55.7 66 0.0023 26.5 9.1 81 84-180 11-101 (281)
490 2i6t_A Ubiquitin-conjugating e 55.6 61 0.0021 27.6 9.0 96 84-205 14-123 (303)
491 1y1p_A ARII, aldehyde reductas 55.4 91 0.0031 26.0 10.8 82 82-181 9-94 (342)
492 3osu_A 3-oxoacyl-[acyl-carrier 55.2 80 0.0027 25.3 9.6 78 84-180 4-92 (246)
493 3f1l_A Uncharacterized oxidore 55.1 82 0.0028 25.4 10.8 79 84-180 12-102 (252)
494 3tka_A Ribosomal RNA small sub 55.1 6.7 0.00023 34.4 2.7 38 186-223 253-290 (347)
495 1wg8_A Predicted S-adenosylmet 54.7 6.6 0.00023 33.5 2.5 36 186-221 212-247 (285)
496 3ic5_A Putative saccharopine d 54.4 49 0.0017 22.7 7.2 70 84-179 5-78 (118)
497 1bg6_A N-(1-D-carboxylethyl)-L 54.3 46 0.0016 28.5 8.2 98 85-205 5-107 (359)
498 3tfo_A Putative 3-oxoacyl-(acy 54.1 58 0.002 26.8 8.5 78 84-180 4-91 (264)
499 3v8b_A Putative dehydrogenase, 53.9 65 0.0022 26.7 8.8 79 83-180 27-115 (283)
500 3imf_A Short chain dehydrogena 53.7 51 0.0017 26.8 8.0 78 84-180 6-93 (257)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.92 E-value=1.3e-23 Score=182.51 Aligned_cols=188 Identities=18% Similarity=0.209 Sum_probs=136.0
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
.+++.+|||+|||+|..+..+++.... ++.+|+|+|+|+.|++.|++++...+.. .+++++++|
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~---------------~~~~v~gvD~s~~ml~~A~~~~~~~~~~-~~v~~~~~D 131 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHH---------------DNCKIIAIDNSPAMIERCRRHIDAYKAP-TPVDVIEGD 131 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCS---------------SSCEEEEEESCHHHHHHHHHHHHTSCCS-SCEEEEESC
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCC---------------CCCEEEEEECCHHHHHHHHHHHHhhccC-ceEEEeecc
Confidence 356889999999999999999987531 4679999999999999999998877665 689999999
Q ss_pred cccCCCCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCC
Q 036563 161 AEALCFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGD 238 (288)
Q Consensus 161 ~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
+.+++++ .||+|+++.+++++++. ..+|++++++|||||.|++.+...+...........+........| .....
T Consensus 132 ~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g-~s~~e 208 (261)
T 4gek_A 132 IRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANG-YSELE 208 (261)
T ss_dssp TTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTT-GGGST
T ss_pred ccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcC-CCHHH
Confidence 9988764 59999999999998744 5689999999999999999988877665544332221111111011 00000
Q ss_pred CcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeeeC
Q 036563 239 RGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLKI 288 (288)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k~ 288 (288)
........+.+....+.+++.++|+++||+.+++..-. ..++.++|+|+
T Consensus 209 i~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~fq~-~nF~~~iA~K~ 257 (261)
T 4gek_A 209 ISQKRSMLENVMLTDSVETHKARLHKAGFEHSELWFQC-FNFGSLVALKA 257 (261)
T ss_dssp THHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEEEEE-TTEEEEEEECC
T ss_pred HHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEEEEe-ccEEEEEEEEc
Confidence 01111222334445688999999999999999875433 33456778875
No 2
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.91 E-value=1.2e-23 Score=178.99 Aligned_cols=215 Identities=19% Similarity=0.253 Sum_probs=152.2
Q ss_pred HHHHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCC
Q 036563 46 SNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEE 124 (288)
Q Consensus 46 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 124 (288)
.++|+..+..|+.............+ +.+...+. ..++.+|||+|||+|.++..+++.. +.
T Consensus 7 ~~~f~~~a~~y~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-----------------~~ 68 (234)
T 3dtn_A 7 KRKFDAVSGKYDEQRRKFIPCFDDFY-GVSVSIASVDTENPDILDLGAGTGLLSAFLMEKY-----------------PE 68 (234)
T ss_dssp CCCCCHHHHHHHHHHHHHCTTHHHHH-HHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHC-----------------TT
T ss_pred HHHHHHHHHHHHHhHHHhCcCHHHHH-HHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhC-----------------CC
Confidence 45677777888766554443333333 45555555 4567899999999999999999986 45
Q ss_pred ceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHH--HHHHHHHhhccCCcE
Q 036563 125 TRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIE--KALAEAYRVLKRGGR 202 (288)
Q Consensus 125 ~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~ 202 (288)
.+++++|+++.+++.++++.... +++.+..+|+.+++++ ++||+|++..+++++++.. .+++++.++|+|||.
T Consensus 69 ~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 143 (234)
T 3dtn_A 69 ATFTLVDMSEKMLEIAKNRFRGN----LKVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGI 143 (234)
T ss_dssp CEEEEEESCHHHHHHHHHHTCSC----TTEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred CeEEEEECCHHHHHHHHHhhccC----CCEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcE
Confidence 89999999999999999987654 3799999999988776 7899999999999998665 599999999999999
Q ss_pred EEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchh--hhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCee
Q 036563 203 FLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQ--YLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVV 280 (288)
Q Consensus 203 l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~ 280 (288)
+++.+...+....................+. ...... +......+.++.+++.++|+++||+++++.....+ +
T Consensus 144 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~-~ 218 (234)
T 3dtn_A 144 FINADLVHGETAFIENLNKTIWRQYVENSGL----TEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQ-F 218 (234)
T ss_dssp EEEEEECBCSSHHHHHHHHHHHHHHHHTSSC----CHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEEEETT-E
T ss_pred EEEEEecCCCChhhhhHHHHHHHHHHHhcCC----CHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeeeeecc-e
Confidence 9999887776554433322211111100000 000000 00012234668999999999999999999766555 5
Q ss_pred EEEEeeeC
Q 036563 281 AIHSGLKI 288 (288)
Q Consensus 281 ~~~~~~k~ 288 (288)
+++.+.|+
T Consensus 219 ~~~~~~~~ 226 (234)
T 3dtn_A 219 AVMFGRKT 226 (234)
T ss_dssp EEEEEECC
T ss_pred eEEEEEec
Confidence 56666653
No 3
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.89 E-value=6.7e-22 Score=165.79 Aligned_cols=179 Identities=15% Similarity=0.188 Sum_probs=135.7
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc
Q 036563 68 HRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER 147 (288)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 147 (288)
...+.+.+.+.+...++ +|||+|||+|.++..+++.. ..+++++|+++.+++.++++....
T Consensus 29 ~~~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~~------------------~~~v~~~D~s~~~~~~a~~~~~~~ 89 (219)
T 3dlc_A 29 YPIIAENIINRFGITAG-TCIDIGSGPGALSIALAKQS------------------DFSIRALDFSKHMNEIALKNIADA 89 (219)
T ss_dssp HHHHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHHS------------------EEEEEEEESCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHcC------------------CCeEEEEECCHHHHHHHHHHHHhc
Confidence 44555667777776666 99999999999999998872 479999999999999999999887
Q ss_pred CCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccc
Q 036563 148 GYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSV 227 (288)
Q Consensus 148 ~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
++. +++.+..+|+.++++++++||+|++..+++|++++..+++++.++|+|||.+++.+..... .............
T Consensus 90 ~~~-~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~-~~~~~~~~~~~~~- 166 (219)
T 3dlc_A 90 NLN-DRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNK-ELRDSISAEMIRK- 166 (219)
T ss_dssp TCT-TTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH-HHHHHHHHHHHHH-
T ss_pred ccc-CceEEEEcCHHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcH-HHHHHHHHHHHHh-
Confidence 765 6899999999998888889999999999999999999999999999999999987654432 2222221111100
Q ss_pred cccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCe
Q 036563 228 IPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGV 279 (288)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~ 279 (288)
. ..+.........+++.+++.++|+++||+++++.....+.
T Consensus 167 ~-----------~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~ 207 (219)
T 3dlc_A 167 N-----------PDWKEFNRKNISQENVERFQNVLDEIGISSYEIILGDEGF 207 (219)
T ss_dssp C-----------TTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEEEETTEE
T ss_pred H-----------HHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEEecCCce
Confidence 0 0011111111123377999999999999999988766554
No 4
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.88 E-value=6e-22 Score=166.81 Aligned_cols=201 Identities=15% Similarity=0.221 Sum_probs=130.2
Q ss_pred HHHHHHhHhhHHHhhhhhhhhhhh---hHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccc
Q 036563 44 LVSNVFSSVAKNYDLMNDLMSGGL---HRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDD 120 (288)
Q Consensus 44 ~~~~~~~~~~~~y~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~ 120 (288)
.+.++|+..+..|+.......... ...+ ..+++.+...++.+|||+|||+|.++..+++..
T Consensus 4 ~~~~~f~~~a~~y~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--------------- 67 (220)
T 3hnr_A 4 EFNGLFDEWAHTYDSFVQGEDIQYKEVFAHY-EDILEDVVNKSFGNVLEFGVGTGNLTNKLLLAG--------------- 67 (220)
T ss_dssp --------------------CCTTTTTTTTH-HHHHHHHHHTCCSEEEEECCTTSHHHHHHHHTT---------------
T ss_pred hHHHHHHHHHHHHHHHhhcchHhHHHHHHHH-HHHHHHhhccCCCeEEEeCCCCCHHHHHHHhCC---------------
Confidence 456788888888986543221111 1112 234444544577899999999999999998863
Q ss_pred cCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHH--HHHHHHhhcc
Q 036563 121 LQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEK--ALAEAYRVLK 198 (288)
Q Consensus 121 ~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~--~l~~~~~~L~ 198 (288)
.+++++|+++.+++.++++.. .++.+..+|+.+++++ ++||+|++..+++++++... +|+++.++|+
T Consensus 68 ----~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 136 (220)
T 3hnr_A 68 ----RTVYGIEPSREMRMIAKEKLP------KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLN 136 (220)
T ss_dssp ----CEEEEECSCHHHHHHHHHHSC------TTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSC
T ss_pred ----CeEEEEeCCHHHHHHHHHhCC------CceEEEeCChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcC
Confidence 799999999999999988764 2789999999988877 89999999999999998876 9999999999
Q ss_pred CCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHH--hcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 199 RGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESV--RRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 199 pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
|||.+++.+.................. ..+....... ..+++.+++.++|+++||+++.....
T Consensus 137 pgG~l~i~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~~- 201 (220)
T 3hnr_A 137 KGGKIVFADTIFADQDAYDKTVEAAKQ--------------RGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRLN- 201 (220)
T ss_dssp TTCEEEEEEECBSSHHHHHHHHHHHHH--------------TTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEECS-
T ss_pred CCCEEEEEeccccChHHHHHHHHHHHh--------------CCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeecc-
Confidence 999999988666554444333332210 0111111111 23568999999999999987776543
Q ss_pred CCeeEEEEeee
Q 036563 277 GGVVAIHSGLK 287 (288)
Q Consensus 277 ~~~~~~~~~~k 287 (288)
+...+..+.|
T Consensus 202 -~~~w~~~~~~ 211 (220)
T 3hnr_A 202 -HFVWVMEATK 211 (220)
T ss_dssp -SSEEEEEEEE
T ss_pred -ceEEEEeehh
Confidence 4444555444
No 5
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.88 E-value=2.4e-21 Score=168.45 Aligned_cols=196 Identities=19% Similarity=0.262 Sum_probs=136.7
Q ss_pred hHHHHHHHhHhhHHHhhhhh-hhh-------------hhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhh
Q 036563 42 SQLVSNVFSSVAKNYDLMND-LMS-------------GGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNS 107 (288)
Q Consensus 42 ~~~~~~~~~~~~~~y~~~~~-~~~-------------~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~ 107 (288)
.+.+..+|+..+..|+.... .++ ....+...+.+.+.+...++.+|||+|||+|.++..+++..
T Consensus 6 ~~~~~~~Yd~~~~~y~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-- 83 (273)
T 3bus_A 6 PEEVRQMYDDFTDPFARIWGENLHFGYWEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-- 83 (273)
T ss_dssp -----------------CCGGGCCCCCCCCSSCCCCHHHHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--
T ss_pred HHHHHHHHcchHHHHHHHcCCCceEEecCCCccccCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--
Confidence 34566677776666653211 111 11223445677788887888999999999999999998875
Q ss_pred hhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHH
Q 036563 108 IKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIE 187 (288)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~ 187 (288)
+.+++++|+|+.+++.++++....++. +++.+..+|+..+++++++||+|++..+++|+++..
T Consensus 84 ----------------~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~ 146 (273)
T 3bus_A 84 ----------------DVRVTGISISRPQVNQANARATAAGLA-NRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRG 146 (273)
T ss_dssp ----------------CCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHH
T ss_pred ----------------CCEEEEEeCCHHHHHHHHHHHHhcCCC-cceEEEECccccCCCCCCCccEEEEechhhhCCCHH
Confidence 389999999999999999998887765 689999999998888888999999999999999999
Q ss_pred HHHHHHHhhccCCcEEEEEeccCCCh--HHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHc
Q 036563 188 KALAEAYRVLKRGGRFLCLELSHVDI--PVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDA 265 (288)
Q Consensus 188 ~~l~~~~~~L~pgG~l~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 265 (288)
.+++++.++|+|||.+++.+...... .........+. .. .....+++.+++.++|+++
T Consensus 147 ~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~----~~----------------~~~~~~~~~~~~~~~l~~a 206 (273)
T 3bus_A 147 RALREMARVLRPGGTVAIADFVLLAPVEGAKKEAVDAFR----AG----------------GGVLSLGGIDEYESDVRQA 206 (273)
T ss_dssp HHHHHHHTTEEEEEEEEEEEEEESSCCCHHHHHHHHHHH----HH----------------HTCCCCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCeEEEEEEeeccCCCChhHHHHHHHHH----hh----------------cCccCCCCHHHHHHHHHHc
Confidence 99999999999999999887654321 11111111110 00 0012356889999999999
Q ss_pred CCcEEEEEEee
Q 036563 266 GFQKVEYENLV 276 (288)
Q Consensus 266 Gf~~v~~~~~~ 276 (288)
||+++++..+.
T Consensus 207 Gf~~~~~~~~~ 217 (273)
T 3bus_A 207 ELVVTSTVDIS 217 (273)
T ss_dssp TCEEEEEEECH
T ss_pred CCeEEEEEECc
Confidence 99999887764
No 6
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.88 E-value=3.8e-21 Score=166.28 Aligned_cols=165 Identities=26% Similarity=0.364 Sum_probs=131.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+++.+...++.+|||+|||+|.++..+++.. .+++++|+|+.|++.++++....++ +
T Consensus 27 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-------------------~~v~gvD~s~~~l~~a~~~~~~~~~--~ 85 (260)
T 1vl5_A 27 AKLMQIAALKGNEEVLDVATGGGHVANAFAPFV-------------------KKVVAFDLTEDILKVARAFIEGNGH--Q 85 (260)
T ss_dssp HHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS-------------------SEEEEEESCHHHHHHHHHHHHHTTC--C
T ss_pred HHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC-------------------CEEEEEeCCHHHHHHHHHHHHhcCC--C
Confidence 345666777788899999999999999888764 5999999999999999999877765 3
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccccccc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIG 232 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
++.+..+|+..+++++++||+|++..+++|++++..+|+++.++|+|||.+++.+...+..+........... ..
T Consensus 86 ~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~-----~~ 160 (260)
T 1vl5_A 86 QVEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNYVEK-----ER 160 (260)
T ss_dssp SEEEEECCC-CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHHHHH-----HH
T ss_pred ceEEEEecHHhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHHHHH-----hc
Confidence 7999999999988888899999999999999999999999999999999999987776665544443332210 00
Q ss_pred ccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 233 ELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
. . ...++++.+++.++|+++||+++.+....
T Consensus 161 ---~--~--------~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 191 (260)
T 1vl5_A 161 ---D--Y--------SHHRAWKKSDWLKMLEEAGFELEELHCFH 191 (260)
T ss_dssp ---C--T--------TCCCCCBHHHHHHHHHHHTCEEEEEEEEE
T ss_pred ---C--c--------cccCCCCHHHHHHHHHHCCCeEEEEEEee
Confidence 0 0 00124588999999999999998887653
No 7
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.87 E-value=8.4e-21 Score=167.21 Aligned_cols=164 Identities=16% Similarity=0.130 Sum_probs=132.9
Q ss_pred HHHHHHHhhc----CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhh
Q 036563 70 LWKDRLVSKL----NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRAL 145 (288)
Q Consensus 70 ~~~~~~~~~l----~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~ 145 (288)
...+.+...+ ...++.+|||+|||+|.++..+++..+ .+++++|+++.+++.++++..
T Consensus 65 ~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~------------------~~v~gvD~s~~~~~~a~~~~~ 126 (297)
T 2o57_A 65 RTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFG------------------VSIDCLNIAPVQNKRNEEYNN 126 (297)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC------------------CEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhC------------------CEEEEEeCCHHHHHHHHHHHH
Confidence 3345667777 667888999999999999999998863 699999999999999999988
Q ss_pred hcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCCh---HHHHHHHHH
Q 036563 146 ERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDI---PVFKELYDY 222 (288)
Q Consensus 146 ~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~---~~~~~~~~~ 222 (288)
..++. +++.+..+|+..+++++++||+|++..+++|++++..+|+++.++|+|||.+++.+...... .....+...
T Consensus 127 ~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 205 (297)
T 2o57_A 127 QAGLA-DNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSIQPILDR 205 (297)
T ss_dssp HHTCT-TTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGGHHHHHH
T ss_pred hcCCC-cceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHHHHHHHH
Confidence 77765 68999999999988888899999999999999999999999999999999999987654321 111111111
Q ss_pred hhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 223 YSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
+. ...+.+.+++.++|+++||++++...+.
T Consensus 206 ~~------------------------~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 235 (297)
T 2o57_A 206 IK------------------------LHDMGSLGLYRSLAKECGLVTLRTFSRP 235 (297)
T ss_dssp HT------------------------CSSCCCHHHHHHHHHHTTEEEEEEEECH
T ss_pred hc------------------------CCCCCCHHHHHHHHHHCCCeEEEEEECc
Confidence 10 0124588999999999999999987654
No 8
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.87 E-value=3.7e-21 Score=161.86 Aligned_cols=166 Identities=17% Similarity=0.230 Sum_probs=136.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.++..+...++.+|||+|||+|.++..+++..+ +..+++++|+++.+++.++++....+++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~----------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~-- 88 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVG----------------EKGKVYAIDVQEEMVNYAWEKVNKLGLK-- 88 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHT----------------TTCEEEEEESCHHHHHHHHHHHHHHTCT--
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhC----------------CCcEEEEEECCHHHHHHHHHHHHHcCCC--
Confidence 4466677777888999999999999999999863 4579999999999999999998887764
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccccccc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIG 232 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
++.+..+|+..+++++++||+|++..++++++++..+++++.++|+|||.+++.++.......
T Consensus 89 ~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~----------------- 151 (219)
T 3dh0_A 89 NVEVLKSEENKIPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDK----------------- 151 (219)
T ss_dssp TEEEEECBTTBCSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS-----------------
T ss_pred cEEEEecccccCCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccccc-----------------
Confidence 799999999988888889999999999999999999999999999999999998766543200
Q ss_pred ccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 233 ELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
.. ...++++.+++.++++++||++++........+.+. ++|
T Consensus 152 ----~~---------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~-~~k 192 (219)
T 3dh0_A 152 ----GP---------PPEEVYSEWEVGLILEDAGIRVGRVVEVGKYCFGVY-AMI 192 (219)
T ss_dssp ----SC---------CGGGSCCHHHHHHHHHHTTCEEEEEEEETTTEEEEE-EEC
T ss_pred ----CC---------chhcccCHHHHHHHHHHCCCEEEEEEeeCCceEEEE-EEe
Confidence 00 011245889999999999999999988766554443 344
No 9
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.87 E-value=7.6e-21 Score=165.06 Aligned_cols=184 Identities=18% Similarity=0.181 Sum_probs=137.0
Q ss_pred HhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceE
Q 036563 49 FSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRI 127 (288)
Q Consensus 49 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v 127 (288)
++.....|+...+... ........++..+. ..++.+|||||||+|.++..+++.. ..++
T Consensus 13 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~------------------~~~v 72 (267)
T 3kkz_A 13 LNLICDFFSNMERQGP--GSPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHV------------------TGQV 72 (267)
T ss_dssp HHHHHHHHHTSSCSSS--CCHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTC------------------SSEE
T ss_pred HHHHHHHHhhccccCC--CCHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhcc------------------CCEE
Confidence 3445555654433221 11222334555555 5678899999999999999998873 4799
Q ss_pred EEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 128 YVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 128 ~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+++|+++.+++.++++....+++ +++.+..+|+.++++++++||+|++..+++++ ++..+++++.++|+|||.+++.+
T Consensus 73 ~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 73 TGLDFLSGFIDIFNRNARQSGLQ-NRVTGIVGSMDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEeCCHHHHHHHHHHHHHcCCC-cCcEEEEcChhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEE
Confidence 99999999999999999888776 67999999999988888899999999999999 89999999999999999999887
Q ss_pred ccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 208 LSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
...............+. +....+.+.+++.++|+++||++++...+.
T Consensus 151 ~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (267)
T 3kkz_A 151 CSWFTDERPAEINDFWM----------------------DAYPEIDTIPNQVAKIHKAGYLPVATFILP 197 (267)
T ss_dssp EEESSSCCCHHHHHHHH----------------------HHCTTCEEHHHHHHHHHHTTEEEEEEEECC
T ss_pred eeecCCCChHHHHHHHH----------------------HhCCCCCCHHHHHHHHHHCCCEEEEEEECC
Confidence 64321111111111110 011124578999999999999999987764
No 10
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.87 E-value=1.6e-20 Score=157.40 Aligned_cols=200 Identities=14% Similarity=0.109 Sum_probs=137.8
Q ss_pred HhHHHHHHHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhccccc
Q 036563 41 KSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLED 119 (288)
Q Consensus 41 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~ 119 (288)
..+...++|+..+..|+........ .....+...+. ..++.+|||+|||+|.++..+++..
T Consensus 7 ~~~~~~~~~~~~a~~y~~~~~~~~~----~~~~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~-------------- 68 (218)
T 3ou2_A 7 LIESQLSYYRARASEYDATFVPYMD----SAAPAALERLRAGNIRGDVLELASGTGYWTRHLSGLA-------------- 68 (218)
T ss_dssp HHHHHHHHHHHHGGGHHHHHHHHHT----TTHHHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHS--------------
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHH----HHHHHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcC--------------
Confidence 3456678999999988863221111 11233444443 4566799999999999999998873
Q ss_pred ccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCH--HHHHHHHHhhc
Q 036563 120 DLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVL 197 (288)
Q Consensus 120 ~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L 197 (288)
.+++++|+++.+++.+++ .+. +++.+..+|+.++ +++++||+|++..+++|+++. ..+|+++.++|
T Consensus 69 -----~~v~~~D~s~~~~~~a~~----~~~--~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L 136 (218)
T 3ou2_A 69 -----DRVTALDGSAEMIAEAGR----HGL--DNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAV 136 (218)
T ss_dssp -----SEEEEEESCHHHHHHHGG----GCC--TTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHE
T ss_pred -----CeEEEEeCCHHHHHHHHh----cCC--CCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHc
Confidence 799999999999999987 222 4799999999887 677899999999999999875 88999999999
Q ss_pred cCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeC
Q 036563 198 KRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVG 277 (288)
Q Consensus 198 ~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~ 277 (288)
+|||.+++.+...+.......... ...+........ ...|. ...++++.+++.++|+++||++........
T Consensus 137 ~pgG~l~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~l~~aGf~v~~~~~~~~ 207 (218)
T 3ou2_A 137 APGGVVEFVDVTDHERRLEQQDDS----EPEVAVRRTLQD-GRSFR----IVKVFRSPAELTERLTALGWSCSVDEVHPG 207 (218)
T ss_dssp EEEEEEEEEEECCCC----------------CEEEEECTT-SCEEE----EECCCCCHHHHHHHHHHTTEEEEEEEEETT
T ss_pred CCCeEEEEEeCCCCccccchhhhc----ccccceeeecCC-cchhh----HhhcCCCHHHHHHHHHHCCCEEEeeecccc
Confidence 999999998887754332221111 111222222221 11111 123467999999999999999655554433
Q ss_pred Ce
Q 036563 278 GV 279 (288)
Q Consensus 278 ~~ 279 (288)
..
T Consensus 208 ~~ 209 (218)
T 3ou2_A 208 FL 209 (218)
T ss_dssp EE
T ss_pred ce
Confidence 33
No 11
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.86 E-value=1.4e-20 Score=161.00 Aligned_cols=165 Identities=24% Similarity=0.330 Sum_probs=133.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..++..+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....+++
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-------------------~~v~~vD~s~~~~~~a~~~~~~~~~~-- 69 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV-------------------QECIGVDATKEMVEVASSFAQEKGVE-- 69 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS-------------------SEEEEEESCHHHHHHHHHHHHHHTCC--
T ss_pred chHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC-------------------CEEEEEECCHHHHHHHHHHHHHcCCC--
Confidence 446677778889999999999999999888764 69999999999999999998777663
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccccccc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIG 232 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
++.+..+|+..+++++++||+|++..+++|++++..+++++.++|+|||.+++.+...+..............
T Consensus 70 ~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~------- 142 (239)
T 1xxl_A 70 NVRFQQGTAESLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVNHLNR------- 142 (239)
T ss_dssp SEEEEECBTTBCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHH-------
T ss_pred CeEEEecccccCCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHHHHHH-------
Confidence 7999999999988888899999999999999999999999999999999999988877665544443332210
Q ss_pred ccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 233 ELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
.... ...+.++.+++.++|+++||+++......
T Consensus 143 -~~~~----------~~~~~~~~~~~~~ll~~aGf~~~~~~~~~ 175 (239)
T 1xxl_A 143 -LRDP----------SHVRESSLSEWQAMFSANQLAYQDIQKWN 175 (239)
T ss_dssp -HHCT----------TCCCCCBHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -hccc----------cccCCCCHHHHHHHHHHCCCcEEEEEeec
Confidence 0000 00124588999999999999998887653
No 12
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.86 E-value=7.4e-21 Score=162.30 Aligned_cols=190 Identities=20% Similarity=0.216 Sum_probs=125.8
Q ss_pred HHhHHHHHHHhHhhHHHhhhhhh-hhhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccc
Q 036563 40 EKSQLVSNVFSSVAKNYDLMNDL-MSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLE 118 (288)
Q Consensus 40 ~~~~~~~~~~~~~~~~y~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~ 118 (288)
...+...++|+..+..|+..... ........+.+.+...++ ++.+|||+|||+|.++..+++..
T Consensus 11 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~------------- 75 (242)
T 3l8d_A 11 NWHESAEKKWDSSAEFWNQNSQEMWDSGSRSTIIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTG------------- 75 (242)
T ss_dssp ---------------------CHHHHTSTTTTHHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTT-------------
T ss_pred chHHHHHHHHHhHHHHhhhhhhhccCcccHHHHHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcC-------------
Confidence 34456778888888888754322 122222334445555554 57799999999999999998873
Q ss_pred cccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhcc
Q 036563 119 DDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLK 198 (288)
Q Consensus 119 ~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~ 198 (288)
.+++++|+++.+++.++++... .++.++.+|+.++++++++||+|++..+++|++++..+++++.++|+
T Consensus 76 ------~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~ 144 (242)
T 3l8d_A 76 ------YKAVGVDISEVMIQKGKERGEG-----PDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLK 144 (242)
T ss_dssp ------CEEEEEESCHHHHHHHHTTTCB-----TTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEE
T ss_pred ------CeEEEEECCHHHHHHHHhhccc-----CCceEEEcchhcCCCCCCCccEEEEcChHhhccCHHHHHHHHHHHhC
Confidence 7999999999999999877422 58999999999988888899999999999999999999999999999
Q ss_pred CCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 199 RGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 199 pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
|||.+++.+............ ....... ...+.++.+++.++++++||++++...+.
T Consensus 145 pgG~l~i~~~~~~~~~~~~~~------------~~~~~~~---------~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 201 (242)
T 3l8d_A 145 SDGYACIAILGPTAKPRENSY------------PRLYGKD---------VVCNTMMPWEFEQLVKEQGFKVVDGIGVY 201 (242)
T ss_dssp EEEEEEEEEECTTCGGGGGGG------------GGGGTCC---------CSSCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCeEEEEEEcCCcchhhhhhh------------hhhcccc---------ccccCCCHHHHHHHHHHcCCEEEEeeccc
Confidence 999999887655432211110 0000000 01224688999999999999999987553
No 13
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.86 E-value=1.8e-20 Score=161.50 Aligned_cols=162 Identities=20% Similarity=0.242 Sum_probs=127.8
Q ss_pred HHHHhhc-CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 73 DRLVSKL-NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 73 ~~~~~~l-~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
..++..+ ...++.+|||+|||+|..+..+++..+ .+++++|+++.+++.++++....++.
T Consensus 35 ~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~------------------~~v~~vD~s~~~~~~a~~~~~~~~~~- 95 (257)
T 3f4k_A 35 RKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK------------------GQITGIDLFPDFIEIFNENAVKANCA- 95 (257)
T ss_dssp HHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC------------------SEEEEEESCHHHHHHHHHHHHHTTCT-
T ss_pred HHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC------------------CeEEEEECCHHHHHHHHHHHHHcCCC-
Confidence 3455555 456678999999999999999999862 59999999999999999999888776
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccc
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAI 231 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
+++.+..+|+..+++++++||+|++..+++|+ ++..+++++.++|+|||++++.+...............+.
T Consensus 96 ~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~------- 167 (257)
T 3f4k_A 96 DRVKGITGSMDNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWM------- 167 (257)
T ss_dssp TTEEEEECCTTSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHH-------
T ss_pred CceEEEECChhhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHH-------
Confidence 67999999999888888899999999999998 8999999999999999999988754221111111111111
Q ss_pred cccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 232 GELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
.....+.+.+++.++|+++||++++.....
T Consensus 168 ---------------~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 197 (257)
T 3f4k_A 168 ---------------DAYPEISVIPTCIDKMERAGYTPTAHFILP 197 (257)
T ss_dssp ---------------HHCTTCCBHHHHHHHHHHTTEEEEEEEECC
T ss_pred ---------------HhCCCCCCHHHHHHHHHHCCCeEEEEEECC
Confidence 011124588999999999999999987654
No 14
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.86 E-value=2.2e-20 Score=155.34 Aligned_cols=189 Identities=15% Similarity=0.081 Sum_probs=138.5
Q ss_pred HHHHHHHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccC
Q 036563 43 QLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQ 122 (288)
Q Consensus 43 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~ 122 (288)
+.+.++|+..+..|+......... ...+...+...+.. .+.+|||+|||+|.++..+++..
T Consensus 3 ~~~~~~y~~~a~~y~~~~~~~~~~-~~~~~~~l~~~~~~-~~~~vLDiGcG~G~~~~~l~~~~----------------- 63 (203)
T 3h2b_A 3 DDVSKAYSSPTFDAEALLGTVISA-EDPDRVLIEPWATG-VDGVILDVGSGTGRWTGHLASLG----------------- 63 (203)
T ss_dssp CHHHHHHHCTTTCHHHHTCSSCCT-TCTTHHHHHHHHHH-CCSCEEEETCTTCHHHHHHHHTT-----------------
T ss_pred HHHHHHHhhHHHHHHHHhhhhccc-cHHHHHHHHHHhcc-CCCeEEEecCCCCHHHHHHHhcC-----------------
Confidence 467889999999997543221110 01111222222222 26799999999999999998873
Q ss_pred CCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEecccccccc--CHHHHHHHHHhhccCC
Q 036563 123 EETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVT--HIEKALAEAYRVLKRG 200 (288)
Q Consensus 123 ~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pg 200 (288)
.+++++|+++.+++.++++. +++.++.+|+.++++++++||+|++..+++|++ ++..+++++.++|+||
T Consensus 64 --~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg 134 (203)
T 3h2b_A 64 --HQIEGLEPATRLVELARQTH-------PSVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDG 134 (203)
T ss_dssp --CCEEEECCCHHHHHHHHHHC-------TTSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEE
T ss_pred --CeEEEEeCCHHHHHHHHHhC-------CCCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCC
Confidence 69999999999999998873 478999999999888888999999999999997 8899999999999999
Q ss_pred cEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCee
Q 036563 201 GRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVV 280 (288)
Q Consensus 201 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~ 280 (288)
|.+++......... .+.. ... ...+++.+++.++|+++||++++.......-.
T Consensus 135 G~l~i~~~~~~~~~---------------~~~~---~~~---------~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~p~ 187 (203)
T 3h2b_A 135 GGLLMSFFSGPSLE---------------PMYH---PVA---------TAYRWPLPELAQALETAGFQVTSSHWDPRFPH 187 (203)
T ss_dssp EEEEEEEECCSSCE---------------EECC---SSS---------CEEECCHHHHHHHHHHTTEEEEEEEECTTSSE
T ss_pred cEEEEEEccCCchh---------------hhhc---hhh---------hhccCCHHHHHHHHHHCCCcEEEEEecCCCcc
Confidence 99998776554300 0000 000 01245899999999999999999988766444
Q ss_pred EEEEee
Q 036563 281 AIHSGL 286 (288)
Q Consensus 281 ~~~~~~ 286 (288)
+.+...
T Consensus 188 ~~l~~~ 193 (203)
T 3h2b_A 188 AYLTAE 193 (203)
T ss_dssp EEEEEE
T ss_pred hhhhhh
Confidence 444433
No 15
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.85 E-value=1.8e-20 Score=164.20 Aligned_cols=200 Identities=16% Similarity=0.297 Sum_probs=133.1
Q ss_pred HHHHhHhhHHHhhhhhhhh-hhhhH-HH---HHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccc
Q 036563 46 SNVFSSVAKNYDLMNDLMS-GGLHR-LW---KDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDD 120 (288)
Q Consensus 46 ~~~~~~~~~~y~~~~~~~~-~~~~~-~~---~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~ 120 (288)
...|+..+..|+....... ..... .. ...++..+... +.+|||+|||+|.++..+++..
T Consensus 27 ~~~fd~~a~~y~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~~--------------- 90 (285)
T 4htf_A 27 DRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQ-KLRVLDAGGGEGQTAIKMAERG--------------- 90 (285)
T ss_dssp -----CHHHHHHSCTTSCHHHHHHHHHHHHHHHHHHHHTCSS-CCEEEEETCTTCHHHHHHHHTT---------------
T ss_pred ccchhhHHHHHHHHhccCCcchHHHHHHHHHHHHHHHhcCCC-CCEEEEeCCcchHHHHHHHHCC---------------
Confidence 4567888888874321111 11111 11 12344444443 5799999999999999998872
Q ss_pred cCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCC-CCCCCeeEEEeccccccccCHHHHHHHHHhhccC
Q 036563 121 LQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALC-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKR 199 (288)
Q Consensus 121 ~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~p 199 (288)
.+++++|+++.+++.++++....++. +++.++.+|+.+++ +++++||+|++..+++|++++..+++++.++|+|
T Consensus 91 ----~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkp 165 (285)
T 4htf_A 91 ----HQVILCDLSAQMIDRAKQAAEAKGVS-DNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRP 165 (285)
T ss_dssp ----CEEEEEESCHHHHHHHHHHHHC-CCG-GGEEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEE
T ss_pred ----CEEEEEECCHHHHHHHHHHHHhcCCC-cceEEEEcCHHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCC
Confidence 79999999999999999998877765 68999999999886 6778999999999999999999999999999999
Q ss_pred CcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 200 GGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 200 gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
||.+++.................+. .. ............ ...++++.+++.++|+++||++++...+
T Consensus 166 gG~l~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~-----~~~~~~~~~~l~~~l~~aGf~v~~~~~~ 232 (285)
T 4htf_A 166 GGVLSLMFYNAHGLLMHNMVAGNFD-YV---QAGMPKKKKRTL-----SPDYPRDPTQVYLWLEEAGWQIMGKTGV 232 (285)
T ss_dssp EEEEEEEEEBHHHHHHHHHHTTCHH-HH---HTTCCCC----C-----CCSCCBCHHHHHHHHHHTTCEEEEEEEE
T ss_pred CeEEEEEEeCCchHHHHHHHhcCHH-HH---hhhccccccccC-----CCCCCCCHHHHHHHHHHCCCceeeeeeE
Confidence 9999987654422111111100000 00 000000000000 0123568999999999999999988765
No 16
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.85 E-value=2.1e-20 Score=160.92 Aligned_cols=165 Identities=19% Similarity=0.162 Sum_probs=130.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
....+.+...+...++.+|||+|||+|.++..+++..+ .+++++|+++.+++.++++....+
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~------------------~~v~gvD~s~~~l~~a~~~~~~~~ 83 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHG------------------ITGTGIDMSSLFTAQAKRRAEELG 83 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTC------------------CEEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcC------------------CeEEEEeCCHHHHHHHHHHHHhcC
Confidence 34445677778878889999999999999999998853 789999999999999999988877
Q ss_pred CCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccc
Q 036563 149 YPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVI 228 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
+. +++.+..+|+.++++ +++||+|++..++++++++..+|+++.++|||||.+++.+......+........+.
T Consensus 84 ~~-~~v~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~~~---- 157 (256)
T 1nkv_A 84 VS-ERVHFIHNDAAGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQACG---- 157 (256)
T ss_dssp CT-TTEEEEESCCTTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHHTTT----
T ss_pred CC-cceEEEECChHhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHHHHh----
Confidence 65 689999999998876 678999999999999999999999999999999999987654322211111111110
Q ss_pred ccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEE
Q 036563 229 PAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYEN 274 (288)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 274 (288)
. .....+++.+++.++|+++||++++...
T Consensus 158 --------~---------~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 158 --------V---------SSTSDFLTLPGLVGAFDDLGYDVVEMVL 186 (256)
T ss_dssp --------C---------SCGGGSCCHHHHHHHHHTTTBCCCEEEE
T ss_pred --------c---------ccccccCCHHHHHHHHHHCCCeeEEEEe
Confidence 0 0012356899999999999999987654
No 17
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.85 E-value=6.1e-20 Score=162.29 Aligned_cols=172 Identities=19% Similarity=0.166 Sum_probs=130.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+.+.+...++.+|||||||+|.++..+++..+ .+++++|+|+.+++.++++....++. .
T Consensus 62 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~------------------~~v~gvD~s~~~~~~a~~~~~~~~~~-~ 122 (302)
T 3hem_A 62 KLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD------------------VNVIGLTLSENQYAHDKAMFDEVDSP-R 122 (302)
T ss_dssp HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC------------------CEEEEEECCHHHHHHHHHHHHHSCCS-S
T ss_pred HHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC------------------CEEEEEECCHHHHHHHHHHHHhcCCC-C
Confidence 5567777778889999999999999999999863 78999999999999999999888776 6
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCH---------HHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHh
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI---------EKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYY 223 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~---------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~ 223 (288)
++.+..+|+.++ +++||+|++..+++|++++ ..+++++.++|+|||.+++.+...+...........+
T Consensus 123 ~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 199 (302)
T 3hem_A 123 RKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTS 199 (302)
T ss_dssp CEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCC
T ss_pred ceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccc
Confidence 899999999876 6789999999999999654 7899999999999999999888776544322110000
Q ss_pred hc---cccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeC
Q 036563 224 SF---SVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVG 277 (288)
Q Consensus 224 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~ 277 (288)
.. ...+.+....... ..+++.+++.++++++||++++...+..
T Consensus 200 ~~~~~~~~~~~~~~~~p~-----------~~~~s~~~~~~~l~~aGf~~~~~~~~~~ 245 (302)
T 3hem_A 200 PMSLLRFIKFILTEIFPG-----------GRLPRISQVDYYSSNAGWKVERYHRIGA 245 (302)
T ss_dssp CHHHHHHHHHHHHHTCTT-----------CCCCCHHHHHHHHHHHTCEEEEEEECGG
T ss_pred cccccchHHHHHHhcCCC-----------CCCCCHHHHHHHHHhCCcEEEEEEeCch
Confidence 00 0000000000000 1256889999999999999999887643
No 18
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.85 E-value=2.4e-20 Score=161.16 Aligned_cols=163 Identities=17% Similarity=0.272 Sum_probs=130.9
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
..+.+++.+...++.+|||+|||+|.++..+++..+ .+++++|+|+.+++.++++....
T Consensus 43 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~------------------~~v~~vD~s~~~~~~a~~~~~~~--- 101 (266)
T 3ujc_A 43 ATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYG------------------AHTHGIDICSNIVNMANERVSGN--- 101 (266)
T ss_dssp HHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHC------------------CEEEEEESCHHHHHHHHHTCCSC---
T ss_pred HHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcC------------------CEEEEEeCCHHHHHHHHHHhhcC---
Confidence 345677777778888999999999999999999853 79999999999999999886554
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEeccccccc--cCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccc
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNV--THIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVI 228 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
+++.+..+|+..+++++++||+|++..+++|+ .++..+++++.++|+|||.+++.+...+....+......+.
T Consensus 102 -~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~---- 176 (266)
T 3ujc_A 102 -NKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFKEYV---- 176 (266)
T ss_dssp -TTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHHHHH----
T ss_pred -CCeEEEECccccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHHHHH----
Confidence 47999999999988888899999999999999 78899999999999999999998876554211111111110
Q ss_pred ccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 229 PAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
......+++.+++.++|+++||++++...+.
T Consensus 177 -----------------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 207 (266)
T 3ujc_A 177 -----------------KQRKYTLITVEEYADILTACNFKNVVSKDLS 207 (266)
T ss_dssp -----------------HHHTCCCCCHHHHHHHHHHTTCEEEEEEECH
T ss_pred -----------------hcCCCCCCCHHHHHHHHHHcCCeEEEEEeCC
Confidence 0111235689999999999999999987654
No 19
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.84 E-value=1.2e-19 Score=161.30 Aligned_cols=159 Identities=14% Similarity=0.158 Sum_probs=130.2
Q ss_pred HHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 73 DRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 73 ~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
+.+.+.+. ..++.+|||+|||+|.++..+++..+ .+++++|+++.+++.++++....++.
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~------------------~~v~gvD~s~~~~~~a~~~~~~~~~~- 166 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFG------------------SRVEGVTLSAAQADFGNRRARELRID- 166 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHC------------------CEEEEEESCHHHHHHHHHHHHHTTCT-
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcC------------------CEEEEEeCCHHHHHHHHHHHHHcCCC-
Confidence 34666666 67788999999999999999998853 79999999999999999999888776
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCCh-----HHHHHHHHHhhcc
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDI-----PVFKELYDYYSFS 226 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~-----~~~~~~~~~~~~~ 226 (288)
+++.+..+|+.++++++++||+|++..+++++ +...+++++.++|+|||.+++.+...... .....+...+
T Consensus 167 ~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~--- 242 (312)
T 3vc1_A 167 DHVRSRVCNMLDTPFDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHF--- 242 (312)
T ss_dssp TTEEEEECCTTSCCCCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHH---
T ss_pred CceEEEECChhcCCCCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhh---
Confidence 68999999999988888899999999999999 69999999999999999999877644321 1222211111
Q ss_pred ccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 227 VIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
...+++.+++.++|+++||++++...+.
T Consensus 243 ----------------------~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 270 (312)
T 3vc1_A 243 ----------------------ECNIHSRREYLRAMADNRLVPHTIVDLT 270 (312)
T ss_dssp ----------------------TCCCCBHHHHHHHHHTTTEEEEEEEECH
T ss_pred ----------------------cCCCCCHHHHHHHHHHCCCEEEEEEeCC
Confidence 0125588999999999999999988764
No 20
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.84 E-value=3.9e-20 Score=158.21 Aligned_cols=189 Identities=15% Similarity=0.114 Sum_probs=133.6
Q ss_pred HHhHHHHHHHhHhhHHHhhhhhhhhh--h----hhHHHHHHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhh
Q 036563 40 EKSQLVSNVFSSVAKNYDLMNDLMSG--G----LHRLWKDRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRA 112 (288)
Q Consensus 40 ~~~~~~~~~~~~~~~~y~~~~~~~~~--~----~~~~~~~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~ 112 (288)
...+...++|+..+..|+.....+.. . ....+.+.+...+. ..++.+|||+|||+|.++..+++..
T Consensus 29 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~------- 101 (241)
T 2ex4_A 29 QFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL------- 101 (241)
T ss_dssp HHHHHHHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT-------
T ss_pred hhHHHHHHHHhcCCccccccccCCCCcchhhHHhHHHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc-------
Confidence 34456677787777766643221110 0 01112222222221 2357899999999999999888764
Q ss_pred hhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCH--HHHH
Q 036563 113 LQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI--EKAL 190 (288)
Q Consensus 113 ~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l 190 (288)
..+++++|+++.+++.++++....+. .++.+..+|+..+++++++||+|++..+++++++. ..++
T Consensus 102 -----------~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l 168 (241)
T 2ex4_A 102 -----------FREVDMVDITEDFLVQAKTYLGEEGK--RVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFL 168 (241)
T ss_dssp -----------CSEEEEEESCHHHHHHHHHHTGGGGG--GEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHH
T ss_pred -----------CCEEEEEeCCHHHHHHHHHHhhhcCC--ceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHH
Confidence 26999999999999999998766531 46899999998888777789999999999999874 4899
Q ss_pred HHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEE
Q 036563 191 AEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKV 270 (288)
Q Consensus 191 ~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 270 (288)
+++.++|+|||.+++.+....... .+......+ ..+.+++.++|+++||+++
T Consensus 169 ~~~~~~LkpgG~l~i~~~~~~~~~-------------------~~~~~~~~~---------~~~~~~~~~~l~~aGf~~~ 220 (241)
T 2ex4_A 169 RRCKGSLRPNGIIVIKDNMAQEGV-------------------ILDDVDSSV---------CRDLDVVRRIICSAGLSLL 220 (241)
T ss_dssp HHHHHHEEEEEEEEEEEEEBSSSE-------------------EEETTTTEE---------EEBHHHHHHHHHHTTCCEE
T ss_pred HHHHHhcCCCeEEEEEEccCCCcc-------------------eecccCCcc---------cCCHHHHHHHHHHcCCeEE
Confidence 999999999999999876554300 000000001 2278999999999999999
Q ss_pred EEEEee
Q 036563 271 EYENLV 276 (288)
Q Consensus 271 ~~~~~~ 276 (288)
+.....
T Consensus 221 ~~~~~~ 226 (241)
T 2ex4_A 221 AEERQE 226 (241)
T ss_dssp EEEECC
T ss_pred EeeecC
Confidence 987653
No 21
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.84 E-value=1.5e-19 Score=157.46 Aligned_cols=166 Identities=22% Similarity=0.303 Sum_probs=128.6
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+.......++.+|||+|||+|.++..+++.. +..+++++|+++.+++.++++....+.+
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-----------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~-- 87 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNN-----------------PDAEITSIDISPESLEKARENTEKNGIK-- 87 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHC-----------------TTSEEEEEESCHHHHHHHHHHHHHTTCC--
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhC-----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC--
Confidence 444455556778899999999999999999886 4689999999999999999998887663
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccC------CChHHHHHHHHHhhcc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSH------VDIPVFKELYDYYSFS 226 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~------~~~~~~~~~~~~~~~~ 226 (288)
++.+..+|+..+++++++||+|++..++++++++..+++++.++|+|||.+++.+... +...........+..
T Consensus 88 ~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 166 (276)
T 3mgg_A 88 NVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIR- 166 (276)
T ss_dssp SEEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHH-
T ss_pred CcEEEEcccccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHH-
Confidence 7999999999988888899999999999999999999999999999999999876532 222222222221110
Q ss_pred ccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 227 VIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
.....+ ....+..++.++|+++||+++++...
T Consensus 167 ~~~~~~-----------------~~~~~~~~l~~~l~~aGf~~v~~~~~ 198 (276)
T 3mgg_A 167 VQAYMK-----------------GNSLVGRQIYPLLQESGFEKIRVEPR 198 (276)
T ss_dssp HHHHTT-----------------CCTTGGGGHHHHHHHTTCEEEEEEEE
T ss_pred HHHhcC-----------------CCcchHHHHHHHHHHCCCCeEEEeeE
Confidence 000000 11235678999999999999988754
No 22
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.84 E-value=9.8e-20 Score=157.10 Aligned_cols=190 Identities=21% Similarity=0.221 Sum_probs=133.1
Q ss_pred HHHHhHhhHHHhhhhhhhhhhhhHHHHHHHHh-hcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCC
Q 036563 46 SNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVS-KLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEE 124 (288)
Q Consensus 46 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 124 (288)
.+.|+..+..|+..... .....+.+.+.+.. .....++.+|||+|||+|.++..+++..
T Consensus 2 ~~~~~~~a~~y~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~------------------- 61 (263)
T 2yqz_A 2 SSALLRAAYAYDRLRAH-PPEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARG------------------- 61 (263)
T ss_dssp CHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTT-------------------
T ss_pred CCchHHHHHHHhhhccc-ChHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCC-------------------
Confidence 35688888888865432 22333333334433 2244667899999999999999888763
Q ss_pred ceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEE
Q 036563 125 TRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 125 ~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
.+++++|+|+.+++.++++. .... +++.+..+|+..+++++++||+|++..+++++++...+++++.++|+|||.++
T Consensus 62 ~~v~~vD~s~~~~~~a~~~~-~~~~--~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 138 (263)
T 2yqz_A 62 YRYIALDADAAMLEVFRQKI-AGVD--RKVQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALL 138 (263)
T ss_dssp CEEEEEESCHHHHHHHHHHT-TTSC--TTEEEEESCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEE
T ss_pred CEEEEEECCHHHHHHHHHHh-hccC--CceEEEEcccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEE
Confidence 78999999999999999887 2222 58999999999888888899999999999999999999999999999999999
Q ss_pred EEeccCCC-hHH--HHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEE
Q 036563 205 CLELSHVD-IPV--FKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYEN 274 (288)
Q Consensus 205 i~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 274 (288)
+. +..++ ... +........ ...+. ..... ..+.+.+++.++|+++||+++....
T Consensus 139 ~~-~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~--------~~~~~~~~~~~~l~~~Gf~~~~~~~ 195 (263)
T 2yqz_A 139 EG-WDQAEASPEWTLQERWRAFA----AEEGF---PVERG--------LHAKRLKEVEEALRRLGLKPRTREV 195 (263)
T ss_dssp EE-EEEECCCHHHHHHHHHHHHH----HHHTC---CCCCC--------HHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred EE-ecCCCccHHHHHHHHHHHHH----HHhCC---Ccccc--------cccCCHHHHHHHHHHcCCCcceEEE
Confidence 86 33321 121 111111111 00110 00000 1123678999999999999877643
No 23
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.84 E-value=7.3e-20 Score=162.12 Aligned_cols=174 Identities=14% Similarity=0.065 Sum_probs=132.2
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
..++.+|||+|||+|..+..++.... +..+++++|+++.+++.++++....++. ++++++.+|
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~----------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d 178 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSAC----------------PGVQLVGIDYDPEALDGATRLAAGHALA-GQITLHRQD 178 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTC----------------TTCEEEEEESCHHHHHHHHHHHTTSTTG-GGEEEEECC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC----------------CCCeEEEEECCHHHHHHHHHHHHhcCCC-CceEEEECc
Confidence 35678999999999999988853221 4689999999999999999999877765 569999999
Q ss_pred cccCCCCCCCeeEEEeccccccccCHHH---HHHHHHhhccCCcEEEEEeccCCChHHHH------------HHHHHhhc
Q 036563 161 AEALCFEDSTMDGYTIAFGIRNVTHIEK---ALAEAYRVLKRGGRFLCLELSHVDIPVFK------------ELYDYYSF 225 (288)
Q Consensus 161 ~~~~~~~~~~~D~v~~~~~l~~~~~~~~---~l~~~~~~L~pgG~l~i~~~~~~~~~~~~------------~~~~~~~~ 225 (288)
+.+++++ ++||+|+++.+++|++++.. +++++.++|+|||.+++.+...+...... .....+.
T Consensus 179 ~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~- 256 (305)
T 3ocj_A 179 AWKLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLV- 256 (305)
T ss_dssp GGGCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHH-
T ss_pred hhcCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhH-
Confidence 9998877 89999999999999987765 79999999999999998776543211000 0000000
Q ss_pred cccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeeeC
Q 036563 226 SVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLKI 288 (288)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k~ 288 (288)
+... ...++..+++.+++.++|+++||+++++.....+....+.++||
T Consensus 257 -----~~~~----------~~~~~~~~~~~~~~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kp 304 (305)
T 3ocj_A 257 -----FTRL----------IQPRWNALRTHAQTRAQLEEAGFTDLRFEDDRARLFPTVIARKP 304 (305)
T ss_dssp -----HHHT----------TCCSCCCCCCHHHHHHHHHHTTCEEEEEECCTTSSSCEEEEECC
T ss_pred -----HHHH----------HhhhhhccCCHHHHHHHHHHCCCEEEEEEcccCceeeEEEEecC
Confidence 0000 00011235689999999999999999999877788888888886
No 24
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.84 E-value=2.4e-20 Score=160.28 Aligned_cols=183 Identities=13% Similarity=0.119 Sum_probs=133.5
Q ss_pred HHHHHhHhhHHHhhhhhhhh--hhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccC
Q 036563 45 VSNVFSSVAKNYDLMNDLMS--GGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQ 122 (288)
Q Consensus 45 ~~~~~~~~~~~y~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~ 122 (288)
..++|+..+..|+.....+. ......+...++..+...++.+|||+|||+|.++..+++..
T Consensus 53 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~----------------- 115 (254)
T 1xtp_A 53 ALEYWRTVPATVSGVLGGMDHVHDVDIEGSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKL----------------- 115 (254)
T ss_dssp HHHHHHTSCSSHHHHTTTCGGGHHHHHHHHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-----------------
T ss_pred hhhHHhcCCccccceecCcCccCHHHHHHHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-----------------
Confidence 44455554444443322221 11223444566777777778899999999999999988874
Q ss_pred CCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEecccccccc--CHHHHHHHHHhhccCC
Q 036563 123 EETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVT--HIEKALAEAYRVLKRG 200 (288)
Q Consensus 123 ~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pg 200 (288)
..+++++|+++.+++.++++.... .++.+..+|+..+++++++||+|++..+++|++ +...+++++.++|+||
T Consensus 116 -~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 190 (254)
T 1xtp_A 116 -YATTDLLEPVKHMLEEAKRELAGM----PVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN 190 (254)
T ss_dssp -CSEEEEEESCHHHHHHHHHHTTTS----SEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred -cCEEEEEeCCHHHHHHHHHHhccC----CceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCC
Confidence 268999999999999999887654 479999999998888888999999999999994 5789999999999999
Q ss_pred cEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 201 GRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 201 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
|.+++.+........ ....... ..+.+.+++.++|+++||++++.....
T Consensus 191 G~l~i~~~~~~~~~~------------------~~~~~~~---------~~~~~~~~~~~~l~~aGf~~~~~~~~~ 239 (254)
T 1xtp_A 191 GYIFFKENCSTGDRF------------------LVDKEDS---------SLTRSDIHYKRLFNESGVRVVKEAFQE 239 (254)
T ss_dssp EEEEEEEEBC--CCE------------------EEETTTT---------EEEBCHHHHHHHHHHHTCCEEEEEECT
T ss_pred eEEEEEecCCCcccc------------------eecccCC---------cccCCHHHHHHHHHHCCCEEEEeeecC
Confidence 999987753321100 0000000 113478999999999999999987643
No 25
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.83 E-value=6.7e-20 Score=167.57 Aligned_cols=156 Identities=22% Similarity=0.257 Sum_probs=121.0
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc-----C-CCCCce
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER-----G-YPDKSL 154 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-----~-~~~~~v 154 (288)
..++.+|||+|||+|.++..+++..+ +..+++++|+++.+++.++++.... + ...+++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~----------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v 144 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVG----------------EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNV 144 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHT----------------TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCE
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhC----------------CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCce
Confidence 34678999999999999999999864 4579999999999999999887643 2 222589
Q ss_pred EEEEcccccC------CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCCh--HHHHHHHHHhhcc
Q 036563 155 LWVEGDAEAL------CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDI--PVFKELYDYYSFS 226 (288)
Q Consensus 155 ~~~~~d~~~~------~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~--~~~~~~~~~~~~~ 226 (288)
.++.+|+.++ ++++++||+|+++.++++++++..+|+++.++|||||++++.+...... .........+.
T Consensus 145 ~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-- 222 (383)
T 4fsd_A 145 RFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPILYG-- 222 (383)
T ss_dssp EEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHHHH--
T ss_pred EEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHHhh--
Confidence 9999999887 7788899999999999999999999999999999999999876644321 11111100000
Q ss_pred ccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEE
Q 036563 227 VIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYEN 274 (288)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 274 (288)
......++.+++.++|+++||+++++..
T Consensus 223 --------------------~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 250 (383)
T 4fsd_A 223 --------------------ECLGGALYLEDFRRLVAEAGFRDVRLVS 250 (383)
T ss_dssp --------------------TTCTTCCBHHHHHHHHHHTTCCCEEEEE
T ss_pred --------------------cccccCCCHHHHHHHHHHCCCceEEEEe
Confidence 0111245789999999999999887654
No 26
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.83 E-value=1.7e-19 Score=153.98 Aligned_cols=159 Identities=13% Similarity=0.134 Sum_probs=117.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||||||+|.++..+++.. .+++++|+|+.+++.++++... ++.+..+|+
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~-------------------~~v~gvD~s~~~~~~a~~~~~~------~v~~~~~d~ 95 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHF-------------------NDITCVEASEEAISHAQGRLKD------GITYIHSRF 95 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTC-------------------SCEEEEESCHHHHHHHHHHSCS------CEEEEESCG
T ss_pred cCCCcEEEECCCCCHHHHHHHHhC-------------------CcEEEEeCCHHHHHHHHHhhhC------CeEEEEccH
Confidence 356789999999999999888764 5899999999999999887532 689999999
Q ss_pred ccCCCCCCCeeEEEeccccccccCHHHHHHHHH-hhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCc
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHIEKALAEAY-RVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRG 240 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~-~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (288)
.++ .++++||+|++..+++|++++..+|+++. ++|+|||.+++.+........... ... ...+....+.
T Consensus 96 ~~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~---~~~-~~~~~~~~~~----- 165 (250)
T 2p7i_A 96 EDA-QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIA---VKM-GIISHNSAVT----- 165 (250)
T ss_dssp GGC-CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHH---HHT-TSSSSTTCCC-----
T ss_pred HHc-CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHH---HHc-Cccccchhcc-----
Confidence 887 46678999999999999999999999999 999999999987765543221111 110 0111000000
Q ss_pred chhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 241 SYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
.........++++.+++.++|+++||++++...+.
T Consensus 166 -~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~ 200 (250)
T 2p7i_A 166 -EAEFAHGHRCTYALDTLERDASRAGLQVTYRSGIF 200 (250)
T ss_dssp -HHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred -cccccccccccCCHHHHHHHHHHCCCeEEEEeeeE
Confidence 00000111235689999999999999999887543
No 27
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.83 E-value=2.6e-19 Score=159.28 Aligned_cols=173 Identities=16% Similarity=0.135 Sum_probs=129.3
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
..+.+.+.+...++.+|||+|||+|.++..+++..+ .+++++|+|+.+++.++++....++.
T Consensus 78 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~------------------~~v~gvD~s~~~~~~a~~~~~~~~~~ 139 (318)
T 2fk8_A 78 KVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFD------------------VNVIGLTLSKNQHARCEQVLASIDTN 139 (318)
T ss_dssp HHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHC------------------CEEEEEESCHHHHHHHHHHHHTSCCS
T ss_pred HHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCC------------------CEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 345667777777889999999999999999998853 79999999999999999998877765
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEeccccccc--cCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHH---HHHhhc
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNV--THIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKEL---YDYYSF 225 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~---~~~~~~ 225 (288)
+++.+..+|+.+++ ++||+|++..+++|+ ++...+++++.++|+|||.+++.+...+........ ......
T Consensus 140 -~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (318)
T 2fk8_A 140 -RSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETA 215 (318)
T ss_dssp -SCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHH
T ss_pred -CceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhcccccccccc
Confidence 57999999998764 689999999999999 578999999999999999999988877654321100 000000
Q ss_pred cccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 226 SVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
...+.+...... ...+++.+++.++++++||+++++..+.
T Consensus 216 ~~~~~~~~~~~~-----------~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 255 (318)
T 2fk8_A 216 RFIKFIVTEIFP-----------GGRLPSTEMMVEHGEKAGFTVPEPLSLR 255 (318)
T ss_dssp HHHHHHHHHTST-----------TCCCCCHHHHHHHHHHTTCBCCCCEECH
T ss_pred chhhHHHHhcCC-----------CCcCCCHHHHHHHHHhCCCEEEEEEecc
Confidence 000000000000 0125589999999999999998877653
No 28
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.83 E-value=6.5e-19 Score=154.33 Aligned_cols=165 Identities=17% Similarity=0.165 Sum_probs=128.5
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
..+.+.+.+...++.+|||||||+|.++..+++..+ .+++++|+|+.+++.++++....++.
T Consensus 52 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~------------------~~v~gvd~s~~~~~~a~~~~~~~~~~ 113 (287)
T 1kpg_A 52 KIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD------------------VNVVGLTLSKNQANHVQQLVANSENL 113 (287)
T ss_dssp HHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC------------------CEEEEEESCHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcC------------------CEEEEEECCHHHHHHHHHHHHhcCCC
Confidence 335566777777888999999999999999997763 69999999999999999998877665
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEeccccccc--cCHHHHHHHHHhhccCCcEEEEEeccCCChHHH-----------H
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNV--THIEKALAEAYRVLKRGGRFLCLELSHVDIPVF-----------K 217 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~-----------~ 217 (288)
+++.+..+|+.+++ ++||+|++..+++|+ .+...+++++.++|+|||.+++.+...+..... .
T Consensus 114 -~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (287)
T 1kpg_A 114 -RSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFA 189 (287)
T ss_dssp -SCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHH
T ss_pred -CCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCcccccccccccccccc
Confidence 68999999998765 689999999999999 678999999999999999999988766543321 0
Q ss_pred HHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 218 ELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
...... ...... ...+++.+++.++++++||+++++..+.
T Consensus 190 ~~~~~~--------~~~~~~-----------~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 229 (287)
T 1kpg_A 190 RFLKFI--------VTEIFP-----------GGRLPSIPMVQECASANGFTVTRVQSLQ 229 (287)
T ss_dssp HHHHHH--------HHHTST-----------TCCCCCHHHHHHHHHTTTCEEEEEEECH
T ss_pred chhhhH--------HheeCC-----------CCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 000000 000000 0125589999999999999999987653
No 29
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.83 E-value=2.2e-19 Score=153.11 Aligned_cols=212 Identities=17% Similarity=0.157 Sum_probs=138.5
Q ss_pred HHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcCC--CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCc
Q 036563 48 VFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNP--FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEET 125 (288)
Q Consensus 48 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 125 (288)
.|+.++..|+..... ....+.+.+.+.+.+.. .++.+|||+|||+|.++..+++.. .
T Consensus 2 ~y~~~a~~yd~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------------------~ 60 (246)
T 1y8c_A 2 CYNKFAHIYDKLIRA--DVDYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKF-------------------K 60 (246)
T ss_dssp CHHHHHHHHHHHTTC--SCCHHHHHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGGS-------------------S
T ss_pred hHHHHHHHHHHHccc--cccHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHCC-------------------C
Confidence 467777788765431 12233444445554433 267899999999999999888763 6
Q ss_pred eEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEecc-ccccc---cCHHHHHHHHHhhccCCc
Q 036563 126 RIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAF-GIRNV---THIEKALAEAYRVLKRGG 201 (288)
Q Consensus 126 ~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~-~l~~~---~~~~~~l~~~~~~L~pgG 201 (288)
+++++|+++.|++.++++....+. ++.+..+|+.+++++ ++||+|++.. +++|+ .+...+|+++.++|+|||
T Consensus 61 ~~~~~D~s~~~~~~a~~~~~~~~~---~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG 136 (246)
T 1y8c_A 61 NTWAVDLSQEMLSEAENKFRSQGL---KPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGG 136 (246)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTC---CCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEE
T ss_pred cEEEEECCHHHHHHHHHHHhhcCC---CeEEEecccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCc
Confidence 899999999999999998876542 689999999888766 7899999998 99999 567889999999999999
Q ss_pred EEEEEeccCCChHHHHHHHHHhhcc--------cc----------ccccccccCCCcchhhh-HHHHhcCCChHHHHHHH
Q 036563 202 RFLCLELSHVDIPVFKELYDYYSFS--------VI----------PAIGELVAGDRGSYQYL-VESVRRFPPQEKFAAMI 262 (288)
Q Consensus 202 ~l~i~~~~~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 262 (288)
.+++.... + ...........+. .. ..+..... ....+... .....++++.+++.++|
T Consensus 137 ~l~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ll 212 (246)
T 1y8c_A 137 VFIFDINS-Y--YKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVR-DGEFYKRFDEEHEERAYKEEDIEKYL 212 (246)
T ss_dssp EEEEEEEC-H--HHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEE-CSSSEEEEEEEEEEECCCHHHHHHHH
T ss_pred EEEEEecC-H--HHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEe-cCCcccccEEEEEEEcCCHHHHHHHH
Confidence 99863321 1 1111100000000 00 00000000 00001000 00113467999999999
Q ss_pred HHcCCcEEEEEEee-------CCeeEEEEeeeC
Q 036563 263 SDAGFQKVEYENLV-------GGVVAIHSGLKI 288 (288)
Q Consensus 263 ~~aGf~~v~~~~~~-------~~~~~~~~~~k~ 288 (288)
+++||+++++.... .....+++++|+
T Consensus 213 ~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK~ 245 (246)
T 1y8c_A 213 KHGQLNILDKVDCYSNKKVEKFTERITYLVKLG 245 (246)
T ss_dssp HHTTEEEEEEEESSSSCBCCTTCSEEEEEEEEC
T ss_pred HHCCCeEEEEEcccccCcCCCCceeEEEEEEec
Confidence 99999999986541 224457777775
No 30
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.82 E-value=2.1e-19 Score=152.27 Aligned_cols=171 Identities=18% Similarity=0.259 Sum_probs=123.9
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC---CCceEEEEc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP---DKSLLWVEG 159 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~---~~~v~~~~~ 159 (288)
++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....++. ..++.+..+
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~-------------------~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 90 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKG-------------------YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVE 90 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTT-------------------CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHhCC-------------------CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEe
Confidence 57899999999999999998873 79999999999999999988776542 136899999
Q ss_pred ccccCCCCCCCeeEEEeccccccccCHH---HHHHHHHhhccCCcEEEEEeccCCChH-HHHHHHHHhhccccccccccc
Q 036563 160 DAEALCFEDSTMDGYTIAFGIRNVTHIE---KALAEAYRVLKRGGRFLCLELSHVDIP-VFKELYDYYSFSVIPAIGELV 235 (288)
Q Consensus 160 d~~~~~~~~~~~D~v~~~~~l~~~~~~~---~~l~~~~~~L~pgG~l~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (288)
|+..+++++++||+|++..++++++++. .+++++.++|+|||.+++.++...... .+........ ......+...
T Consensus 91 d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 169 (235)
T 3sm3_A 91 NASSLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDF-PITKEEGSFL 169 (235)
T ss_dssp CTTSCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHH-HHHCSTTEEE
T ss_pred cccccCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhc-cchhhhcceE
Confidence 9998888888999999999999998877 899999999999999999877654322 2221111100 0011111111
Q ss_pred cCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 236 AGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
........ .....++++.+++.++|+++||+++++...
T Consensus 170 ~~~~~~~~--~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 170 ARDPETGE--TEFIAHHFTEKELVFLLTDCRFEIDYFRVK 207 (235)
T ss_dssp EECTTTCC--EEEEEECBCHHHHHHHHHTTTEEEEEEEEE
T ss_pred ecccccCC--cceeeEeCCHHHHHHHHHHcCCEEEEEEec
Confidence 11100000 011123669999999999999999998754
No 31
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.82 E-value=1.2e-18 Score=158.34 Aligned_cols=174 Identities=17% Similarity=0.196 Sum_probs=136.2
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..+.+.++..+..+|||+|||+|.++..+++.+ +..+++++|+ +.+++.+++++...++. +
T Consensus 192 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~-~~~~~~a~~~~~~~~l~-~ 252 (369)
T 3gwz_A 192 GQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAF-----------------PGLRGTLLER-PPVAEEARELLTGRGLA-D 252 (369)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-----------------TTCEEEEEEC-HHHHHHHHHHHHHTTCT-T
T ss_pred HHHHHhCCCccCcEEEEeCCCccHHHHHHHHHC-----------------CCCeEEEEcC-HHHHHHHHHhhhhcCcC-C
Confidence 445566666677899999999999999999987 5689999999 99999999998887765 7
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCHH--HHHHHHHhhccCCcEEEEEeccCCChHHH-HHHHHHhhccccc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIE--KALAEAYRVLKRGGRFLCLELSHVDIPVF-KELYDYYSFSVIP 229 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~~~-~~~~~~~~~~~~~ 229 (288)
++++..+|+. .+++. .||+|++.+++|++++.. ++|+++++.|+|||++++.+...++.... ....+...
T Consensus 253 ~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~d~~~----- 325 (369)
T 3gwz_A 253 RCEILPGDFF-ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAASTLFVDLLL----- 325 (369)
T ss_dssp TEEEEECCTT-TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHHHHHHHHHH-----
T ss_pred ceEEeccCCC-CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhHhhHHH-----
Confidence 8999999987 44554 799999999999998765 79999999999999999998876643211 11111110
Q ss_pred cccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 230 AIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
+. . ...+..+.++|+++|+++||+++++.....+...++.++|
T Consensus 326 -~~-~-------------~~g~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 326 -LV-L-------------VGGAERSESEFAALLEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp -HH-H-------------HSCCCBCHHHHHHHHHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred -Hh-h-------------cCCccCCHHHHHHHHHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 00 0 0011348899999999999999999886677778887776
No 32
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.82 E-value=3.1e-20 Score=160.85 Aligned_cols=175 Identities=19% Similarity=0.346 Sum_probs=125.4
Q ss_pred HHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceE
Q 036563 48 VFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRI 127 (288)
Q Consensus 48 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v 127 (288)
.|+..+..|+.... ....+.+.+.+.++..++.+|||+|||+|.++..+++. +.++
T Consensus 4 ~y~~~a~~y~~~~~-----~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~-------------------~~~v 59 (261)
T 3ege_A 4 IYNSIGKQYSQTRV-----PDIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQ-------------------GLFV 59 (261)
T ss_dssp ---------CCSBC-----CCHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTT-------------------TCEE
T ss_pred HHHHHHHHHhhccc-----ccHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhC-------------------CCEE
Confidence 57778888876432 22346677778887778899999999999999998873 4899
Q ss_pred EEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 128 YVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 128 ~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+++|+|+.|++.++++ .++.+..+|+.++++++++||+|++..+++|++++..+++++.++|| ||++++.+
T Consensus 60 ~gvD~s~~~~~~a~~~--------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 60 YAVEPSIVMRQQAVVH--------PQVEWFTGYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp EEECSCHHHHHSSCCC--------TTEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred EEEeCCHHHHHHHHhc--------cCCEEEECchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEE
Confidence 9999999998876543 37999999999988888899999999999999999999999999999 99988877
Q ss_pred ccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 208 LSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
+...... ..+.....+ .........+++.+++. +|+++||++++...+
T Consensus 131 ~~~~~~~------~~~~~~~~~-------------~~~~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 131 FDIRLAQ------RIWLYDYFP-------------FLWEDALRFLPLDEQIN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp ECGGGCC------CCGGGGTCH-------------HHHHHHHTSCCHHHHHH-HHHHHHCSEEEEEEC
T ss_pred cCCchhH------HHHHHHHHH-------------HHhhhhhhhCCCHHHHH-HHHHcCCCceeEEEe
Confidence 6542111 000000000 00111223466788899 999999999988765
No 33
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.82 E-value=3.4e-19 Score=153.27 Aligned_cols=113 Identities=16% Similarity=0.233 Sum_probs=99.5
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..+.+.+...++.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++... .
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~------------------~~~v~~vD~s~~~~~~a~~~~~~-----~ 90 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHG------------------AKKVLGIDLSERMLTEAKRKTTS-----P 90 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTT------------------CSEEEEEESCHHHHHHHHHHCCC-----T
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcC------------------CCEEEEEECCHHHHHHHHHhhcc-----C
Confidence 456667776778899999999999999998874 14999999999999999988651 5
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
++.+..+|+..+++++++||+|++..++++++++..+++++.++|+|||.+++...
T Consensus 91 ~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 91 VVCYEQKAIEDIAIEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp TEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CeEEEEcchhhCCCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeC
Confidence 89999999999888888999999999999999999999999999999999997543
No 34
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.82 E-value=2.3e-19 Score=152.97 Aligned_cols=176 Identities=13% Similarity=0.205 Sum_probs=122.2
Q ss_pred HHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 74 RLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
.+...++..++.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++... .+
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~------------------~~~v~~vD~s~~~~~~a~~~~~~-----~~ 90 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHG------------------ASYVLGLDLSEKMLARARAAGPD-----TG 90 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTT------------------CSEEEEEESCHHHHHHHHHTSCS-----SS
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCC------------------CCeEEEEcCCHHHHHHHHHhccc-----CC
Confidence 46667776778899999999999999888763 13999999999999999887543 36
Q ss_pred eEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccc-c---
Q 036563 154 LLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVI-P--- 229 (288)
Q Consensus 154 v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-~--- 229 (288)
+.+..+|+..+++++++||+|++..+++++++...+++++.++|+|||.+++...... ........+..... .
T Consensus 91 ~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 167 (243)
T 3bkw_A 91 ITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPI---YMAPARPGWAIDAEGRRTW 167 (243)
T ss_dssp EEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHH---HHCCSSCSCEECTTSCEEE
T ss_pred ceEEEcChhhccCCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcc---cccCcCcceeecCCCceEE
Confidence 8999999998887778999999999999999999999999999999999998654210 00000000000000 0
Q ss_pred cccccccCCCcchhhhHHHH-hcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 230 AIGELVAGDRGSYQYLVESV-RRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
.+............++.... ....+.+++.++|+++||+++++...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~l~~aGF~~~~~~~~ 214 (243)
T 3bkw_A 168 PIDRYLVEGPRKTDWLAKGVVKHHRTVGTTLNALIRSGFAIEHVEEF 214 (243)
T ss_dssp EECCTTCCEEECTTHHHHSCCEEECCHHHHHHHHHHTTCEEEEEEEC
T ss_pred eecccccccceeeeeccCceEEEeccHHHHHHHHHHcCCEeeeeccC
Confidence 00000000000011111111 11358899999999999999998765
No 35
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.82 E-value=5.6e-19 Score=147.78 Aligned_cols=171 Identities=19% Similarity=0.154 Sum_probs=129.7
Q ss_pred HHHHHHHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccC
Q 036563 43 QLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQ 122 (288)
Q Consensus 43 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~ 122 (288)
....++|+..+..|+..... .. ....+...+ .++.+|||+|||+|.++..+++..
T Consensus 11 ~~~~~~~~~~~~~y~~~~~~-----~~-~~~~~~~~~--~~~~~vLDiGcG~G~~~~~l~~~~----------------- 65 (211)
T 3e23_A 11 DDTLRFYRGNATAYAERQPR-----SA-TLTKFLGEL--PAGAKILELGCGAGYQAEAMLAAG----------------- 65 (211)
T ss_dssp HHHHHHHHHSHHHHTTCCCC-----CH-HHHHHHTTS--CTTCEEEESSCTTSHHHHHHHHTT-----------------
T ss_pred HHHHHHHHHHHHHHhhccch-----hH-HHHHHHHhc--CCCCcEEEECCCCCHHHHHHHHcC-----------------
Confidence 55678899999888765432 12 222333333 357799999999999999998863
Q ss_pred CCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEecccccccc--CHHHHHHHHHhhccCC
Q 036563 123 EETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVT--HIEKALAEAYRVLKRG 200 (288)
Q Consensus 123 ~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pg 200 (288)
.+++++|+++.+++.++++. ++.+..+|+..++ ++++||+|++..+++|++ +...+|+++.++|+||
T Consensus 66 --~~v~~vD~s~~~~~~a~~~~--------~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 134 (211)
T 3e23_A 66 --FDVDATDGSPELAAEASRRL--------GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPG 134 (211)
T ss_dssp --CEEEEEESCHHHHHHHHHHH--------TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred --CeEEEECCCHHHHHHHHHhc--------CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCC
Confidence 79999999999999998875 3567889988887 678999999999999998 7789999999999999
Q ss_pred cEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcC-CcEEEEEEeeC
Q 036563 201 GRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAG-FQKVEYENLVG 277 (288)
Q Consensus 201 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~~v~~~~~~~ 277 (288)
|.+++......... . ..... ...+++.+++.++|+++| |+++++.....
T Consensus 135 G~l~~~~~~~~~~~-----------------~---~~~~~--------~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~ 184 (211)
T 3e23_A 135 GLFYASYKSGEGEG-----------------R---DKLAR--------YYNYPSEEWLRARYAEAGTWASVAVESSEG 184 (211)
T ss_dssp EEEEEEEECCSSCE-----------------E---CTTSC--------EECCCCHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred cEEEEEEcCCCccc-----------------c---cccch--------hccCCCHHHHHHHHHhCCCcEEEEEEeccC
Confidence 99998644332110 0 00000 113568999999999999 99999876543
No 36
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.82 E-value=1e-19 Score=153.17 Aligned_cols=208 Identities=12% Similarity=0.054 Sum_probs=138.2
Q ss_pred hHHHHHHHhHhhHHHhhhhhhhhhhh-hHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccc
Q 036563 42 SQLVSNVFSSVAKNYDLMNDLMSGGL-HRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDD 120 (288)
Q Consensus 42 ~~~~~~~~~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~ 120 (288)
.+.+.++|+..+..|+.......... .......+...+...++.+|||+|||+|.++..+++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--------------- 74 (227)
T 3e8s_A 10 EDALLDSWHQNAQAWIDAVRHGAIESRRQVTDQAILLAILGRQPERVLDLGCGEGWLLRALADRG--------------- 74 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCHHHHHTHHHHHHHHHHHTCCSEEEEETCTTCHHHHHHHTTT---------------
T ss_pred HHHHHHHHHhhHHHHHHHhcccccccccccccHHHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCC---------------
Confidence 46678899999888876432211111 11123445555555567899999999999999888873
Q ss_pred cCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccC---CCC-CCCeeEEEeccccccccCHHHHHHHHHhh
Q 036563 121 LQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEAL---CFE-DSTMDGYTIAFGIRNVTHIEKALAEAYRV 196 (288)
Q Consensus 121 ~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~---~~~-~~~~D~v~~~~~l~~~~~~~~~l~~~~~~ 196 (288)
.+++++|+++.+++.++++ .++.+..+|+.++ ++. ..+||+|++..+++ ..++..+++++.++
T Consensus 75 ----~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~ 141 (227)
T 3e8s_A 75 ----IEAVGVDGDRTLVDAARAA--------GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQDIIELLSAMRTL 141 (227)
T ss_dssp ----CEEEEEESCHHHHHHHHHT--------CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSCCHHHHHHHHHT
T ss_pred ----CEEEEEcCCHHHHHHHHHh--------cccccchhhHHhhcccccccCCCccEEEECchhh-hhhHHHHHHHHHHH
Confidence 7899999999999999876 2567888887765 433 34599999999999 78899999999999
Q ss_pred ccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 197 LKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 197 L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
|+|||.+++.+......... . +. ... ....+......+ ......+++.+++.++|+++||+++++....
T Consensus 142 L~pgG~l~~~~~~~~~~~~~-~----~~-~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 210 (227)
T 3e8s_A 142 LVPGGALVIQTLHPWSVADG-D----YQ-DGW--REESFAGFAGDW---QPMPWYFRTLASWLNALDMAGLRLVSLQEPQ 210 (227)
T ss_dssp EEEEEEEEEEECCTTTTCTT-C----CS-CEE--EEECCTTSSSCC---CCEEEEECCHHHHHHHHHHTTEEEEEEECCC
T ss_pred hCCCeEEEEEecCccccCcc-c----cc-ccc--chhhhhccccCc---ccceEEEecHHHHHHHHHHcCCeEEEEecCC
Confidence 99999999877654321100 0 00 000 000000000000 0111235689999999999999999987632
Q ss_pred C-----CeeEEEEeeeC
Q 036563 277 G-----GVVAIHSGLKI 288 (288)
Q Consensus 277 ~-----~~~~~~~~~k~ 288 (288)
. ....+++++|+
T Consensus 211 ~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 211 HPQSAVPQSLLMVAERH 227 (227)
T ss_dssp CTTCSSCSCEEEEEEEC
T ss_pred CCCCCCceeEEEEeecC
Confidence 2 12445556664
No 37
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.82 E-value=6.6e-19 Score=151.65 Aligned_cols=164 Identities=13% Similarity=0.099 Sum_probs=121.9
Q ss_pred HHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 72 KDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 72 ~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
...++..+...++.+|||+|||+|.++..+++.. +..+++++|+++.|++.++++.
T Consensus 22 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-----------------~~~~v~~~D~s~~~~~~a~~~~------- 77 (259)
T 2p35_A 22 ARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-----------------GVNVITGIDSDDDMLEKAADRL------- 77 (259)
T ss_dssp HHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-----------------CTTSEEEEESCHHHHHHHHHHS-------
T ss_pred HHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-----------------CCCEEEEEECCHHHHHHHHHhC-------
Confidence 3456777777778899999999999999999886 4589999999999999998872
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccc
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAI 231 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
+++.+..+|+..++ ++++||+|+++.++++++++..+++++.++|+|||.+++........+....+....... ..
T Consensus 78 ~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~---~~ 153 (259)
T 2p35_A 78 PNTNFGKADLATWK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGG---PW 153 (259)
T ss_dssp TTSEEEECCTTTCC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHS---TT
T ss_pred CCcEEEECChhhcC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCc---ch
Confidence 57899999998887 677899999999999999999999999999999999998776544333222222211100 00
Q ss_pred cccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEE
Q 036563 232 GELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKV 270 (288)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v 270 (288)
...... .......+++.+++.++|+++||++.
T Consensus 154 ~~~~~~-------~~~~~~~~~~~~~~~~~l~~aGf~v~ 185 (259)
T 2p35_A 154 KDAFSG-------GGLRRKPLPPPSDYFNALSPKSSRVD 185 (259)
T ss_dssp GGGC--------------CCCCCHHHHHHHHGGGEEEEE
T ss_pred HHHhcc-------ccccccCCCCHHHHHHHHHhcCCceE
Confidence 000000 00112246789999999999999743
No 38
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.81 E-value=2.7e-20 Score=161.19 Aligned_cols=174 Identities=17% Similarity=0.167 Sum_probs=120.0
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..+++.. .+++++|+|+.+++.++++. +++.++.+|+.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~-------------------~~v~gvD~s~~~~~~a~~~~-------~~~~~~~~d~~ 103 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSF-------------------GTVEGLELSADMLAIARRRN-------PDAVLHHGDMR 103 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTS-------------------SEEEEEESCHHHHHHHHHHC-------TTSEEEECCTT
T ss_pred CCCcEEEeCCcCCHHHHHHHHcC-------------------CeEEEEECCHHHHHHHHhhC-------CCCEEEECChH
Confidence 46799999999999999888763 68999999999999998875 36899999999
Q ss_pred cCCCCCCCeeEEEecc-cccccc---CHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccccc--------
Q 036563 163 ALCFEDSTMDGYTIAF-GIRNVT---HIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPA-------- 230 (288)
Q Consensus 163 ~~~~~~~~~D~v~~~~-~l~~~~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~-------- 230 (288)
.+++ +++||+|++.. +++|+. +...+++++.++|+|||.+++..+..+....... +.....+.
T Consensus 104 ~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 178 (263)
T 3pfg_A 104 DFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGY----VAAGTVEAGGTTVTRV 178 (263)
T ss_dssp TCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTE----EEEEEEEETTEEEEEE
T ss_pred HCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccc----cccceeccCCceeEEE
Confidence 8876 67899999998 999985 5567899999999999999985443332110000 00000000
Q ss_pred -------------ccccccCCCcchhh-hHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeeeC
Q 036563 231 -------------IGELVAGDRGSYQY-LVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLKI 288 (288)
Q Consensus 231 -------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k~ 288 (288)
+..........+.. ......++++.++++++|+++||+++++... .+...+++++|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~-~~~~~~~va~K~ 249 (263)
T 3pfg_A 179 SHSSREGEATRIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGG-PSGRGLFTGLPG 249 (263)
T ss_dssp EEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESST-TTSSCEEEEEEC
T ss_pred EEEEecCcEEEEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCC-CCCceeEEEecC
Confidence 00000000000000 0011134679999999999999999988554 345567788875
No 39
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.81 E-value=1.8e-18 Score=156.64 Aligned_cols=176 Identities=19% Similarity=0.290 Sum_probs=136.5
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+++.++..++.+|||||||+|.++..+++.. +..+++++|+ +.+++.++++....++. +
T Consensus 180 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~ 240 (359)
T 1x19_A 180 QLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHF-----------------PELDSTILNL-PGAIDLVNENAAEKGVA-D 240 (359)
T ss_dssp HHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHC-----------------TTCEEEEEEC-GGGHHHHHHHHHHTTCT-T
T ss_pred HHHHHhcCCCCCCEEEEECCcccHHHHHHHHHC-----------------CCCeEEEEec-HHHHHHHHHHHHhcCCC-C
Confidence 456666776778899999999999999999987 4689999999 99999999998877765 5
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccC--HHHHHHHHHhhccCCcEEEEEeccCCCh--HHHHHHHHHhhcccc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTH--IEKALAEAYRVLKRGGRFLCLELSHVDI--PVFKELYDYYSFSVI 228 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~--~~~~~~~~~~~~~~~ 228 (288)
+++++.+|+.+.++++ +|+|++..++|++++ ...+|++++++|+|||++++.+...++. +.........
T Consensus 241 ~v~~~~~d~~~~~~~~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~----- 313 (359)
T 1x19_A 241 RMRGIAVDIYKESYPE--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFDYLSHYI----- 313 (359)
T ss_dssp TEEEEECCTTTSCCCC--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHHHHHHHG-----
T ss_pred CEEEEeCccccCCCCC--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHHHHHHHH-----
Confidence 7999999998776654 499999999999987 7889999999999999999988766532 1222221110
Q ss_pred ccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeeeC
Q 036563 229 PAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLKI 288 (288)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k~ 288 (288)
...+ .... ...+.+.++|.++|+++||+++++.... ...++.++||
T Consensus 314 ~~~~----~g~~--------~~~~~t~~e~~~ll~~aGf~~v~~~~~~--~~~vi~a~kp 359 (359)
T 1x19_A 314 LGAG----MPFS--------VLGFKEQARYKEILESLGYKDVTMVRKY--DHLLVQAVKP 359 (359)
T ss_dssp GGGG----SSCC--------CCCCCCGGGHHHHHHHHTCEEEEEEEET--TEEEEEEECC
T ss_pred HhcC----CCCc--------ccCCCCHHHHHHHHHHCCCceEEEEecC--CceEEEEeCC
Confidence 0000 0000 1124689999999999999999998875 5678888886
No 40
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.81 E-value=3.2e-18 Score=153.33 Aligned_cols=173 Identities=18% Similarity=0.195 Sum_probs=130.9
Q ss_pred HHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 72 KDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 72 ~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
...+.+.++..+ .+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++....++.
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~-~~~~~~a~~~~~~~~~~- 216 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAE-----------------PSARGVMLDR-EGSLGVARDNLSSLLAG- 216 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHC-----------------TTCEEEEEEC-TTCTHHHHHHTHHHHHT-
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHC-----------------CCCEEEEeCc-HHHHHHHHHHHhhcCCC-
Confidence 345556666555 899999999999999999886 4679999999 99999999987665544
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccCHH--HHHHHHHhhccCCcEEEEEeccCCCh--HHHHHHHHHhhccc
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIE--KALAEAYRVLKRGGRFLCLELSHVDI--PVFKELYDYYSFSV 227 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~--~~~~~~~~~~~~~~ 227 (288)
+++++..+|+.+ +++ +.||+|++..++|++++.. .+|+++++.|+|||++++.+...++. +......+.....
T Consensus 217 ~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~- 293 (334)
T 2ip2_A 217 ERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSVLWDVHLFM- 293 (334)
T ss_dssp TSEEEEESCTTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHHHHHHHHHH-
T ss_pred CcEEEecCCCCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhHHhhhHhHh-
Confidence 579999999876 444 5799999999999987665 89999999999999999998765532 2222222211100
Q ss_pred cccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 228 IPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
. .. .+..+.++|.++|+++||+++++... .+...++.++|
T Consensus 294 ------~-~~------------~~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~~i~~~~ 333 (334)
T 2ip2_A 294 ------A-CA------------GRHRTTEEVVDLLGRGGFAVERIVDL-PMETRMIVAAR 333 (334)
T ss_dssp ------H-HS------------CCCCBHHHHHHHHHHTTEEEEEEEEE-TTTEEEEEEEE
T ss_pred ------h-CC------------CcCCCHHHHHHHHHHCCCceeEEEEC-CCCCEEEEEEe
Confidence 0 00 01347899999999999999999876 44567777766
No 41
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.81 E-value=1.9e-18 Score=154.80 Aligned_cols=168 Identities=17% Similarity=0.133 Sum_probs=128.4
Q ss_pred HhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 76 VSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 76 ~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
.+.++..+..+|||+|||+|.++..+++.+ +..+++++|+ +.+++.++++....++. ++++
T Consensus 162 ~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~ 222 (332)
T 3i53_A 162 AAKYDWAALGHVVDVGGGSGGLLSALLTAH-----------------EDLSGTVLDL-QGPASAAHRRFLDTGLS-GRAQ 222 (332)
T ss_dssp GGSSCCGGGSEEEEETCTTSHHHHHHHHHC-----------------TTCEEEEEEC-HHHHHHHHHHHHHTTCT-TTEE
T ss_pred HHhCCCCCCCEEEEeCCChhHHHHHHHHHC-----------------CCCeEEEecC-HHHHHHHHHhhhhcCcC-cCeE
Confidence 334444556799999999999999999987 4689999999 99999999998887765 6899
Q ss_pred EEEcccccCCCCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccc
Q 036563 156 WVEGDAEALCFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGE 233 (288)
Q Consensus 156 ~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
+..+|+. .+.+. .||+|++.+++|++++. .++|+++++.|+|||++++.+...++... ....+... +.
T Consensus 223 ~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~d~~~------~~- 292 (332)
T 3i53_A 223 VVVGSFF-DPLPA-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDEHA-GTGMDLRM------LT- 292 (332)
T ss_dssp EEECCTT-SCCCC-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC---C-CHHHHHHH------HH-
T ss_pred EecCCCC-CCCCC-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCCCc-cHHHHHHH------Hh-
Confidence 9999987 34454 79999999999999875 78999999999999999999887654310 01111110 00
Q ss_pred cccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 234 LVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
....+..+.++|.++|+++||+++++..... ..++.+++
T Consensus 293 -------------~~~~~~~t~~e~~~ll~~aGf~~~~~~~~~~--~~vie~r~ 331 (332)
T 3i53_A 293 -------------YFGGKERSLAELGELAAQAGLAVRAAHPISY--VSIVEMTA 331 (332)
T ss_dssp -------------HHSCCCCCHHHHHHHHHHTTEEEEEEEECSS--SEEEEEEE
T ss_pred -------------hCCCCCCCHHHHHHHHHHCCCEEEEEEECCC--cEEEEEee
Confidence 0001234889999999999999999987754 66666654
No 42
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.81 E-value=1.7e-18 Score=154.91 Aligned_cols=175 Identities=15% Similarity=0.174 Sum_probs=132.7
Q ss_pred HHHHhhcCC--CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 73 DRLVSKLNP--FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 73 ~~~~~~l~~--~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
..+++.++. .++.+|||+|||+|.++..+++.. +..+++++|++ .+++.++++....++.
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~~-~~~~~a~~~~~~~~~~ 214 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHN-----------------PNAEIFGVDWA-SVLEVAKENARIQGVA 214 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHC-----------------TTCEEEEEECH-HHHHHHHHHHHHHTCG
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHC-----------------CCCeEEEEecH-HHHHHHHHHHHhcCCC
Confidence 345556665 677899999999999999999986 46899999999 9999999998877665
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEeccccccccC--HHHHHHHHHhhccCCcEEEEEeccCCCh---HHHHHHHHHhhc
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTH--IEKALAEAYRVLKRGGRFLCLELSHVDI---PVFKELYDYYSF 225 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~---~~~~~~~~~~~~ 225 (288)
+++++..+|+.+.+++. .||+|++.+++|++++ ...+|+++.++|+|||++++.+...++. +...........
T Consensus 215 -~~v~~~~~d~~~~~~~~-~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~ 292 (335)
T 2r3s_A 215 -SRYHTIAGSAFEVDYGN-DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPDAAAFSLVML 292 (335)
T ss_dssp -GGEEEEESCTTTSCCCS-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHHHHHHHHHHH
T ss_pred -cceEEEecccccCCCCC-CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchHHHHHHHHHH
Confidence 57999999998766554 4999999999999954 4789999999999999999998876532 222222222110
Q ss_pred cccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 226 SVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
.. .. ..+.++.++|.++|+++||+++++....++. .++.+++
T Consensus 293 ~~--------~~-----------~~~~~t~~~~~~ll~~aGf~~~~~~~~~~~~-~~i~~~~ 334 (335)
T 2r3s_A 293 AT--------TP-----------NGDAYTFAEYESMFSNAGFSHSQLHSLPTTQ-QQVIVAY 334 (335)
T ss_dssp HH--------SS-----------SCCCCCHHHHHHHHHHTTCSEEEEECCTTSS-SEEEEEE
T ss_pred ee--------CC-----------CCCcCCHHHHHHHHHHCCCCeeeEEECCCCc-eeEEEec
Confidence 00 00 0124589999999999999999998875543 4444444
No 43
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.80 E-value=2.5e-18 Score=150.19 Aligned_cols=164 Identities=23% Similarity=0.306 Sum_probs=122.6
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+.+.+...++.+|||+|||+|.++..+++. ..+++++|+|+.|++.++++. +
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-------------------~~~v~gvD~s~~~~~~a~~~~-------~ 100 (279)
T 3ccf_A 47 EDLLQLLNPQPGEFILDLGCGTGQLTEKIAQS-------------------GAEVLGTDNAATMIEKARQNY-------P 100 (279)
T ss_dssp CHHHHHHCCCTTCEEEEETCTTSHHHHHHHHT-------------------TCEEEEEESCHHHHHHHHHHC-------T
T ss_pred HHHHHHhCCCCCCEEEEecCCCCHHHHHHHhC-------------------CCeEEEEECCHHHHHHHHhhC-------C
Confidence 34556667777889999999999999998883 379999999999999998765 3
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHH-HHHHHhhccccccc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFK-ELYDYYSFSVIPAI 231 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 231 (288)
++.+..+|+..+++ +++||+|++..++++++++..+++++.++|+|||.+++..........+. .+..... ..
T Consensus 101 ~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~-----~~ 174 (279)
T 3ccf_A 101 HLHFDVADARNFRV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALE-----TL 174 (279)
T ss_dssp TSCEEECCTTTCCC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHH-----HH
T ss_pred CCEEEECChhhCCc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHH-----hc
Confidence 68899999998876 46899999999999999999999999999999999998766543322222 2211111 00
Q ss_pred cccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 232 GELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
+....... ....+++.+++.++|+++||+++......
T Consensus 175 ~~~~~~~~--------~~~~~~~~~~~~~~l~~aGf~~~~~~~~~ 211 (279)
T 3ccf_A 175 GIHNPQAL--------NPWYFPSIGEYVNILEKQGFDVTYAALFN 211 (279)
T ss_dssp TCCCGGGG--------CCCCCCCHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCccccCc--------CceeCCCHHHHHHHHHHcCCEEEEEEEec
Confidence 10000000 00125689999999999999998877654
No 44
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.80 E-value=2.1e-19 Score=155.53 Aligned_cols=143 Identities=17% Similarity=0.214 Sum_probs=101.7
Q ss_pred HHHHHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCC
Q 036563 45 VSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEE 124 (288)
Q Consensus 45 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 124 (288)
.++.|+..+..|+.....+. ..+.+.+.+..+ .+.+|||||||+|..+..+++..
T Consensus 7 f~d~F~~~a~~Y~~~Rp~yp----~~l~~~l~~~~~--~~~~vLDvGcGtG~~~~~l~~~~------------------- 61 (257)
T 4hg2_A 7 FKDHFTPVADAYRAFRPRYP----RALFRWLGEVAP--ARGDALDCGCGSGQASLGLAEFF------------------- 61 (257)
T ss_dssp -------------CCCCCCC----HHHHHHHHHHSS--CSSEEEEESCTTTTTHHHHHTTC-------------------
T ss_pred HHHHHHHHHHHHHHHCCCcH----HHHHHHHHHhcC--CCCCEEEEcCCCCHHHHHHHHhC-------------------
Confidence 46778899999987643333 233445555544 34689999999999999998774
Q ss_pred ceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEE
Q 036563 125 TRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 125 ~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
.+|+++|+|+.|++.+++. +++.+.++|++++++++++||+|++..++|++ ++.+++++++|+|||||.|+
T Consensus 62 ~~v~gvD~s~~ml~~a~~~--------~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~ 132 (257)
T 4hg2_A 62 ERVHAVDPGEAQIRQALRH--------PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFA 132 (257)
T ss_dssp SEEEEEESCHHHHHTCCCC--------TTEEEEECCTTCCCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEE
T ss_pred CEEEEEeCcHHhhhhhhhc--------CCceeehhhhhhhcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEE
Confidence 7899999999999876532 58999999999999999999999999999776 68889999999999999999
Q ss_pred EEeccCCC-hHHHHHHHH
Q 036563 205 CLELSHVD-IPVFKELYD 221 (288)
Q Consensus 205 i~~~~~~~-~~~~~~~~~ 221 (288)
+.....+. .+.+.....
T Consensus 133 ~~~~~~~~~~~~~~~~~~ 150 (257)
T 4hg2_A 133 AVTYGLTRVDPEVDAVVD 150 (257)
T ss_dssp EEEECCCBCCHHHHHHHH
T ss_pred EEECCCCCCCHHHHHHHH
Confidence 88776542 344444333
No 45
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.80 E-value=1.7e-18 Score=150.61 Aligned_cols=178 Identities=15% Similarity=0.106 Sum_probs=129.8
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChh------HHHHHHHHh
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPN------MLNVGKKRA 144 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~------~~~~a~~~~ 144 (288)
....+++.+...++.+|||||||+|.++..+++..+ +..+++++|+|+. +++.++++.
T Consensus 31 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g----------------~~~~v~gvD~s~~~~~~~~~~~~a~~~~ 94 (275)
T 3bkx_A 31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVG----------------SSGHVTGIDIASPDYGAPLTLGQAWNHL 94 (275)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHC----------------TTCEEEEECSSCTTCCSSSCHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhC----------------CCCEEEEEECCccccccHHHHHHHHHHH
Confidence 335667777778889999999999999999998863 4579999999997 999999998
Q ss_pred hhcCCCCCceEEEEcc---cccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChH--HHHHH
Q 036563 145 LERGYPDKSLLWVEGD---AEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIP--VFKEL 219 (288)
Q Consensus 145 ~~~~~~~~~v~~~~~d---~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~--~~~~~ 219 (288)
...++. +++.+..+| ...+++++++||+|++..+++|++++..+++.+.++++|||.+++.+...+... .....
T Consensus 95 ~~~~~~-~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~ 173 (275)
T 3bkx_A 95 LAGPLG-DRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHL 173 (275)
T ss_dssp HTSTTG-GGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHH
T ss_pred HhcCCC-CceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHH
Confidence 877664 589999998 444566778999999999999999998888888888888999999887765321 11111
Q ss_pred HHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 220 YDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
............. .... ..+..+++.+++.++++++||+++....+
T Consensus 174 ~~~~~~~~~~~~~---~~~~-------~~~~~~~s~~~l~~~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 174 QAAMIQGLLYAIA---PSDV-------ANIRTLITPDTLAQIAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHHHHHHHHHHHS---CCTT-------CSCCCCCCHHHHHHHHHHHTCEEEECCCB
T ss_pred HHHHHHHHHhhcc---cccc-------ccccccCCHHHHHHHHHHCCCeeEEEEEe
Confidence 1111000000000 0000 01123668999999999999999988765
No 46
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.80 E-value=9.7e-20 Score=147.22 Aligned_cols=151 Identities=17% Similarity=0.182 Sum_probs=121.9
Q ss_pred HhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 76 VSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 76 ~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
++.+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++. +++.
T Consensus 10 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-------------------~~v~~vD~s~~~~~~a~~~~-------~~v~ 63 (170)
T 3i9f_A 10 LPNIFEGKKGVIVDYGCGNGFYCKYLLEFA-------------------TKLYCIDINVIALKEVKEKF-------DSVI 63 (170)
T ss_dssp HHHHHSSCCEEEEEETCTTCTTHHHHHTTE-------------------EEEEEECSCHHHHHHHHHHC-------TTSE
T ss_pred HHhcCcCCCCeEEEECCCCCHHHHHHHhhc-------------------CeEEEEeCCHHHHHHHHHhC-------CCcE
Confidence 344455677899999999999999998874 59999999999999998871 5899
Q ss_pred EEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccc
Q 036563 156 WVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELV 235 (288)
Q Consensus 156 ~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
+..+| .++++++||+|++..++++++++..+++++.++|+|||.+++.++....... +
T Consensus 64 ~~~~d---~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~----------------~--- 121 (170)
T 3i9f_A 64 TLSDP---KEIPDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGI----------------G--- 121 (170)
T ss_dssp EESSG---GGSCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSS----------------S---
T ss_pred EEeCC---CCCCCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcccccc----------------C---
Confidence 99998 5567789999999999999999999999999999999999998765542110 0
Q ss_pred cCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 236 AGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
.. ....++.+++.++|+ ||++++........+.++..++
T Consensus 122 --~~---------~~~~~~~~~~~~~l~--Gf~~~~~~~~~~~~~~l~~~~~ 160 (170)
T 3i9f_A 122 --PP---------LSIRMDEKDYMGWFS--NFVVEKRFNPTPYHFGLVLKRK 160 (170)
T ss_dssp --SC---------GGGCCCHHHHHHHTT--TEEEEEEECSSTTEEEEEEEEC
T ss_pred --ch---------HhhhcCHHHHHHHHh--CcEEEEccCCCCceEEEEEecC
Confidence 00 012458899999999 9999999988777666665554
No 47
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.80 E-value=8.3e-19 Score=149.15 Aligned_cols=211 Identities=16% Similarity=0.119 Sum_probs=131.3
Q ss_pred HHHh-HhhHHHhhhhhhhhh---hhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccC
Q 036563 47 NVFS-SVAKNYDLMNDLMSG---GLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQ 122 (288)
Q Consensus 47 ~~~~-~~~~~y~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~ 122 (288)
++|+ ..+..|+........ ...+.+.+.+...+ .++.+|||+|||+|.++..+++..
T Consensus 2 ~~y~~~~a~~yd~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~----------------- 62 (239)
T 3bxo_A 2 HMYEVDHADVYDLFYLGRGKDYAAEASDIADLVRSRT--PEASSLLDVACGTGTHLEHFTKEF----------------- 62 (239)
T ss_dssp --CCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHC--TTCCEEEEETCTTSHHHHHHHHHH-----------------
T ss_pred ccccchhHHHHHHHhhccHhhHHHHHHHHHHHHHHhc--CCCCeEEEecccCCHHHHHHHHhC-----------------
Confidence 3455 666677655322111 11122223333333 456799999999999999998875
Q ss_pred CCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEecc-cccccc---CHHHHHHHHHhhcc
Q 036563 123 EETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAF-GIRNVT---HIEKALAEAYRVLK 198 (288)
Q Consensus 123 ~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~-~l~~~~---~~~~~l~~~~~~L~ 198 (288)
.+++++|+++.+++.++++. +++.+..+|+.++++ +++||+|+|.. +++|+. +...+++++.++|+
T Consensus 63 --~~v~~~D~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 132 (239)
T 3bxo_A 63 --GDTAGLELSEDMLTHARKRL-------PDATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLE 132 (239)
T ss_dssp --SEEEEEESCHHHHHHHHHHC-------TTCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEE
T ss_pred --CcEEEEeCCHHHHHHHHHhC-------CCCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcC
Confidence 48999999999999998874 468999999988776 56899999654 888884 45789999999999
Q ss_pred CCcEEEEEeccCCChHHHHHHHHHhhcc----ccc--------------cccccccCCCcch-hhhHHHHhcCCChHHHH
Q 036563 199 RGGRFLCLELSHVDIPVFKELYDYYSFS----VIP--------------AIGELVAGDRGSY-QYLVESVRRFPPQEKFA 259 (288)
Q Consensus 199 pgG~l~i~~~~~~~~~~~~~~~~~~~~~----~~~--------------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 259 (288)
|||.+++.++..+....-... ...... .+. .+........... .+......++++.++++
T Consensus 133 pgG~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 211 (239)
T 3bxo_A 133 PGGVVVVEPWWFPETFADGWV-SADVVRRDGRTVARVSHSVREGNATRMEVHFTVADPGKGVRHFSDVHLITLFHQAEYE 211 (239)
T ss_dssp EEEEEEECCCCCTTTCCTTCE-EEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCCHHHHH
T ss_pred CCeEEEEEeccCcccccccce-EeeEEecCCceEEEEEEEecCCCEEEEEEEEEEecCCCcceEEEEEEEeeecCHHHHH
Confidence 999999865544321100000 000000 000 0000000000000 00001122467999999
Q ss_pred HHHHHcCCcEEEEEEeeCCeeEEEEeeeC
Q 036563 260 AMISDAGFQKVEYENLVGGVVAIHSGLKI 288 (288)
Q Consensus 260 ~~l~~aGf~~v~~~~~~~~~~~~~~~~k~ 288 (288)
++|+++||+++.+.. ..+...+++++|+
T Consensus 212 ~ll~~aGF~v~~~~~-~~~~~~~~va~K~ 239 (239)
T 3bxo_A 212 AAFTAAGLRVEYLEG-GPSGRGLFVGVPA 239 (239)
T ss_dssp HHHHHTTEEEEEESS-TTTSSCEEEEEEC
T ss_pred HHHHHCCCEEEEeEc-CCCCceEEEEecC
Confidence 999999997666543 3455778888886
No 48
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.80 E-value=2.7e-18 Score=154.84 Aligned_cols=174 Identities=19% Similarity=0.262 Sum_probs=132.8
Q ss_pred HHHhhcCCCC-CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 74 RLVSKLNPFP-GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 74 ~~~~~l~~~~-~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
.+++.++..+ +.+|||||||+|.++..+++.+ +..+++++|+ +.+++.++++....++. +
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~ 229 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRH-----------------PQLTGQIWDL-PTTRDAARKTIHAHDLG-G 229 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHC-----------------TTCEEEEEEC-GGGHHHHHHHHHHTTCG-G
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhC-----------------CCCeEEEEEC-HHHHHHHHHHHHhcCCC-C
Confidence 4555555555 7899999999999999999987 4689999999 88999999988877665 6
Q ss_pred ceEEEEcccccCC-CCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEEeccCCCh---HHHHHHHHHhhcc
Q 036563 153 SLLWVEGDAEALC-FEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCLELSHVDI---PVFKELYDYYSFS 226 (288)
Q Consensus 153 ~v~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~---~~~~~~~~~~~~~ 226 (288)
++++..+|+.+.+ +..+.||+|++.+++|++++. ..+|+++++.|+|||++++.+...++. +.....++.....
T Consensus 230 ~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~ 309 (352)
T 3mcz_A 230 RVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMV 309 (352)
T ss_dssp GEEEEECCTTCGGGGTTCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHHHHHHHHHHH
T ss_pred ceEEEeCCcccCcccCCCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchHHHhhHHHHh
Confidence 7999999988765 134569999999999999865 789999999999999999998766542 2222222221100
Q ss_pred ccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeeeC
Q 036563 227 VIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLKI 288 (288)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k~ 288 (288)
.... .+..+.++|+++|+++||++++.. .|...++.++||
T Consensus 310 --------~~~~-----------~~~~t~~e~~~ll~~aGf~~~~~~---~g~~~l~~a~kp 349 (352)
T 3mcz_A 310 --------NTNH-----------GELHPTPWIAGVVRDAGLAVGERS---IGRYTLLIGQRS 349 (352)
T ss_dssp --------HSTT-----------CCCCCHHHHHHHHHHTTCEEEEEE---ETTEEEEEEECC
T ss_pred --------hCCC-----------CCcCCHHHHHHHHHHCCCceeeec---cCceEEEEEecC
Confidence 0000 013478999999999999999842 466888888886
No 49
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.79 E-value=4.9e-18 Score=149.41 Aligned_cols=158 Identities=16% Similarity=0.229 Sum_probs=110.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCce--EEEEeCChhHHHHHHHHhhhc-CCCCCce--EE
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETR--IYVCDINPNMLNVGKKRALER-GYPDKSL--LW 156 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--v~~~D~s~~~~~~a~~~~~~~-~~~~~~v--~~ 156 (288)
.++.+|||||||+|.++..++...... + +... ++++|+|+.|++.++++.... +. +++ .+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~------------~-~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~--~~v~~~~ 115 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQ------------Y-PGVCINNEVVEPSAEQIAKYKELVAKTSNL--ENVKFAW 115 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHH------------S-TTCEEEEEEECSCHHHHHHHHHHHHTCSSC--TTEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhh------------C-CCceeeEEEEeCCHHHHHHHHHHHHhccCC--CcceEEE
Confidence 456799999999998876655443100 0 2343 499999999999999987643 33 244 44
Q ss_pred EEcccccCC------CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccccc
Q 036563 157 VEGDAEALC------FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPA 230 (288)
Q Consensus 157 ~~~d~~~~~------~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
..++++.++ +++++||+|++..++||++|+..+|++++++|||||++++...... ..+ ...+..+.. .
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~-~~~-~~~~~~~~~----~ 189 (292)
T 2aot_A 116 HKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGS-SGW-DKLWKKYGS----R 189 (292)
T ss_dssp ECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTT-SHH-HHHHHHHGG----G
T ss_pred EecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCC-ccH-HHHHHHHHH----h
Confidence 566665443 4577899999999999999999999999999999999998765432 222 222222210 0
Q ss_pred ccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEE
Q 036563 231 IGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYE 273 (288)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~ 273 (288)
++ .. ....+++.+++.++|+++||+++...
T Consensus 190 ~~----~~---------~~~~~~~~~~~~~~l~~aGf~~~~~~ 219 (292)
T 2aot_A 190 FP----QD---------DLCQYITSDDLTQMLDNLGLKYECYD 219 (292)
T ss_dssp SC----CC---------TTCCCCCHHHHHHHHHHHTCCEEEEE
T ss_pred cc----CC---------CcccCCCHHHHHHHHHHCCCceEEEE
Confidence 00 00 01235688999999999999987643
No 50
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.79 E-value=1.3e-18 Score=152.71 Aligned_cols=213 Identities=14% Similarity=0.131 Sum_probs=123.7
Q ss_pred hHHHHHHHhHhhHHHhhhhhh---hhhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccc
Q 036563 42 SQLVSNVFSSVAKNYDLMNDL---MSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLE 118 (288)
Q Consensus 42 ~~~~~~~~~~~~~~y~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~ 118 (288)
.+.+.++|+..+..|...... ........|....+......++.+|||+|||+|.++..+++..
T Consensus 20 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~------------- 86 (298)
T 1ri5_A 20 KEEIREHYNSIRERGRESRQRSKTINIRNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERAG------------- 86 (298)
T ss_dssp ---------------------CCSHHHHHHHHHHHHHHHHHHCCTTCEEEEETCTTTTTHHHHHHHT-------------
T ss_pred HHHHHHHHHHhhcccccccccchhhhHHHHHHHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHCC-------------
Confidence 345677787777666533211 1111122233222221223567899999999999998877752
Q ss_pred cccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCC-CCCCeeEEEecccccc----ccCHHHHHHHH
Q 036563 119 DDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCF-EDSTMDGYTIAFGIRN----VTHIEKALAEA 193 (288)
Q Consensus 119 ~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~D~v~~~~~l~~----~~~~~~~l~~~ 193 (288)
..+++++|+++.+++.++++....+.. .++.+..+|+...++ ++++||+|++..++++ ..+...+++++
T Consensus 87 -----~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~ 160 (298)
T 1ri5_A 87 -----IGEYYGVDIAEVSINDARVRARNMKRR-FKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNI 160 (298)
T ss_dssp -----CSEEEEEESCHHHHHHHHHHHHTSCCS-SEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHH
T ss_pred -----CCEEEEEECCHHHHHHHHHHHHhcCCC-ccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHH
Confidence 369999999999999999998876654 579999999988876 5778999999999976 35678899999
Q ss_pred HhhccCCcEEEEEeccCCChHHHHHHHHHhhcc-cccc-ccc--cccC-CCcchh-hhHH----HHhcCCChHHHHHHHH
Q 036563 194 YRVLKRGGRFLCLELSHVDIPVFKELYDYYSFS-VIPA-IGE--LVAG-DRGSYQ-YLVE----SVRRFPPQEKFAAMIS 263 (288)
Q Consensus 194 ~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~--~~~~-~~~~~~-~~~~----~~~~~~~~~~~~~~l~ 263 (288)
.++|+|||.+++...... .....+....... .... ... .... ....|. ++.+ ...++++.++++++|+
T Consensus 161 ~~~LkpgG~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~ 238 (298)
T 1ri5_A 161 ARHLRPGGYFIMTVPSRD--VILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFK 238 (298)
T ss_dssp HHTEEEEEEEEEEEECHH--HHHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHH
T ss_pred HHhcCCCCEEEEEECCHH--HHHHHHccCccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHH
Confidence 999999999998654321 1111111100000 0000 000 0000 000111 0111 1134678999999999
Q ss_pred HcCCcEEEEEEe
Q 036563 264 DAGFQKVEYENL 275 (288)
Q Consensus 264 ~aGf~~v~~~~~ 275 (288)
++||++++...+
T Consensus 239 ~aGf~~v~~~~~ 250 (298)
T 1ri5_A 239 RLGLSLVERKGF 250 (298)
T ss_dssp TTTEEEEEEEEH
T ss_pred HcCCEEEEecCH
Confidence 999999998765
No 51
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.79 E-value=1e-17 Score=152.27 Aligned_cols=174 Identities=20% Similarity=0.221 Sum_probs=129.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+.+.++..++.+|||+|||+|.++..+++.. +..+++++|+ +.+++.++++....++. +
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-----------------~~~~~~~~D~-~~~~~~a~~~~~~~~~~-~ 232 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRA-----------------PHLRGTLVEL-AGPAERARRRFADAGLA-D 232 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-----------------TTCEEEEEEC-HHHHHHHHHHHHHTTCT-T
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-----------------CCCEEEEEeC-HHHHHHHHHHHHhcCCC-C
Confidence 445566666678899999999999999999986 4689999999 99999999998877765 5
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCHH--HHHHHHHhhccCCcEEEEEec--cCCCh--HHHHHHHHHhhcc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIE--KALAEAYRVLKRGGRFLCLEL--SHVDI--PVFKELYDYYSFS 226 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~--~~~~~--~~~~~~~~~~~~~ 226 (288)
++++..+|+.+ +++. .||+|++.+++|++++.. .+|+++.++|+|||++++.+. ..++. .......+....
T Consensus 233 ~v~~~~~d~~~-~~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~- 309 (374)
T 1qzz_A 233 RVTVAEGDFFK-PLPV-TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFSTLLDLRML- 309 (374)
T ss_dssp TEEEEECCTTS-CCSC-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHHHHHHHHH-
T ss_pred ceEEEeCCCCC-cCCC-CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhhhcchHHH-
Confidence 89999999865 3343 499999999999998764 899999999999999999887 54432 222222221110
Q ss_pred ccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCee----EEEEeee
Q 036563 227 VIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVV----AIHSGLK 287 (288)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~----~~~~~~k 287 (288)
...+ .+.++.++|.++|+++||+++++.......+ .++.++|
T Consensus 310 --~~~~-----------------~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~ 355 (374)
T 1qzz_A 310 --TFMG-----------------GRVRTRDEVVDLAGSAGLALASERTSGSTTLPFDFSILEFTA 355 (374)
T ss_dssp --HHHS-----------------CCCCCHHHHHHHHHTTTEEEEEEEEECCSSCSSCEEEEEEEE
T ss_pred --HhCC-----------------CcCCCHHHHHHHHHHCCCceEEEEECCCCcccCCcEEEEEEE
Confidence 0000 1245899999999999999999988754331 5666655
No 52
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.79 E-value=3.6e-18 Score=149.71 Aligned_cols=117 Identities=18% Similarity=0.224 Sum_probs=100.6
Q ss_pred HHHHhhc-CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 73 DRLVSKL-NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 73 ~~~~~~l-~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
+.+...+ ...++.+|||+|||+|.++..+++.++ +..+++++|+++.+++.++++....+
T Consensus 11 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~----------------~~~~v~gvD~s~~~~~~a~~~~~~~~--- 71 (284)
T 3gu3_A 11 SFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLP----------------EGSKYTGIDSGETLLAEARELFRLLP--- 71 (284)
T ss_dssp HHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSC----------------TTCEEEEEESCHHHHHHHHHHHHSSS---
T ss_pred HHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHhcC---
Confidence 3344433 456778999999999999999988863 24899999999999999999887654
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
.++.+..+|+.+++++ ++||+|++..++++++++..+++++.++|+|||++++.+..
T Consensus 72 ~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 72 YDSEFLEGDATEIELN-DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SEEEEEESCTTTCCCS-SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CceEEEEcchhhcCcC-CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 4799999999988774 58999999999999999999999999999999999988765
No 53
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.79 E-value=1.7e-18 Score=157.11 Aligned_cols=173 Identities=14% Similarity=0.146 Sum_probs=128.5
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
....+|||||||+|.++..+++.+ |..+++++|+ +.+++.++++....++. ++++++.+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~-~~~~~~a~~~~~~~~~~-~~v~~~~~d~ 238 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-----------------KEVEVTIVDL-PQQLEMMRKQTAGLSGS-ERIHGHGANL 238 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-----------------TTCEEEEEEC-HHHHHHHHHHHTTCTTG-GGEEEEECCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-----------------CCCEEEEEeC-HHHHHHHHHHHHhcCcc-cceEEEEccc
Confidence 345799999999999999999987 5689999999 99999999998877665 6899999999
Q ss_pred ccC--CCCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccC
Q 036563 162 EAL--CFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAG 237 (288)
Q Consensus 162 ~~~--~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
... +++ ++||+|++..++|++++. ..+|+++++.|+|||++++.+...+........+....... .+......
T Consensus 239 ~~~~~~~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 315 (363)
T 3dp7_A 239 LDRDVPFP-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISL--YFTAMANG 315 (363)
T ss_dssp CSSSCCCC-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHH--HHHHSSCS
T ss_pred cccCCCCC-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhh--hHHhhhCC
Confidence 875 355 689999999999998765 57899999999999999999877654332211110000000 00000000
Q ss_pred CCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 238 DRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
. .+..+.++|.++|+++||+++++....+....++..+|
T Consensus 316 ~-----------~~~~t~~e~~~ll~~AGf~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 316 N-----------SKMFHSDDLIRCIENAGLEVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp S-----------CCSCCHHHHHHHHHTTTEEESCCCCCBTTTBEEEEEEE
T ss_pred C-----------CcccCHHHHHHHHHHcCCeEEEEEeCCCCCceEEEEee
Confidence 0 11348899999999999999999877666566666554
No 54
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.78 E-value=6.4e-18 Score=152.80 Aligned_cols=173 Identities=19% Similarity=0.246 Sum_probs=131.6
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..+...++..+..+|||||||+|.++..+++.+ |+.+++.+|. |.+++.+++.....+. +
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~-----------------p~~~~~~~dl-p~v~~~a~~~~~~~~~--~ 228 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLY-----------------PGCKITVFDI-PEVVWTAKQHFSFQEE--E 228 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHC-----------------SSCEEEEEEC-HHHHHHHHHHSCC--C--C
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhC-----------------CCceeEeccC-HHHHHHHHHhhhhccc--C
Confidence 345555566667799999999999999999998 6789999997 8899999888765442 6
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEEeccCCC---hHHHHHHHHHhhccc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCLELSHVD---IPVFKELYDYYSFSV 227 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~---~~~~~~~~~~~~~~~ 227 (288)
+++++.+|+...+.+ .+|+|++..++|+++|. .++|+++++.|+|||+++++|...++ .+.....++.....
T Consensus 229 rv~~~~gD~~~~~~~--~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~~~~dl~ml~- 305 (353)
T 4a6d_A 229 QIDFQEGDFFKDPLP--EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLTQLYSLNMLV- 305 (353)
T ss_dssp SEEEEESCTTTSCCC--CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHHHHHHHHHHH-
T ss_pred ceeeecCccccCCCC--CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHHHHHHHHHHH-
Confidence 899999998765544 48999999999999875 57899999999999999999986553 23333333322100
Q ss_pred cccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeeeC
Q 036563 228 IPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLKI 288 (288)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k~ 288 (288)
.. ... -.|.++|+++|+++||+++++.+. ++...++.++|.
T Consensus 306 ------~~--~g~-----------ert~~e~~~ll~~AGf~~v~v~~~-~~~~~~i~ArKg 346 (353)
T 4a6d_A 306 ------QT--EGQ-----------ERTPTHYHMLLSSAGFRDFQFKKT-GAIYDAILARKG 346 (353)
T ss_dssp ------SS--SCC-----------CCCHHHHHHHHHHHTCEEEEEECC-SSSCEEEEEECC
T ss_pred ------hC--CCc-----------CCCHHHHHHHHHHCCCceEEEEEc-CCceEEEEEEec
Confidence 00 111 127899999999999999999875 566778888884
No 55
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.78 E-value=4.8e-18 Score=144.73 Aligned_cols=209 Identities=19% Similarity=0.344 Sum_probs=135.4
Q ss_pred HHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceE
Q 036563 48 VFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRI 127 (288)
Q Consensus 48 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v 127 (288)
.|+..+..|+.... ......+.+.+...+.. +.+|||+|||+|.++..+++. .++
T Consensus 3 ~y~~~a~~yd~~~~---~~~~~~~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~--------------------~~v 57 (243)
T 3d2l_A 3 AYEQFAYVYDELMQ---DVPYPEWVAWVLEQVEP--GKRIADIGCGTGTATLLLADH--------------------YEV 57 (243)
T ss_dssp ---CTTHHHHHHTT---TCCHHHHHHHHHHHSCT--TCEEEEESCTTCHHHHHHTTT--------------------SEE
T ss_pred hHHHHHHHHHHhhh---cccHHHHHHHHHHHcCC--CCeEEEecCCCCHHHHHHhhC--------------------CeE
Confidence 57788888886543 22234566667676653 579999999999998877654 589
Q ss_pred EEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEecc-ccccc---cCHHHHHHHHHhhccCCcEE
Q 036563 128 YVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAF-GIRNV---THIEKALAEAYRVLKRGGRF 203 (288)
Q Consensus 128 ~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~-~l~~~---~~~~~~l~~~~~~L~pgG~l 203 (288)
+++|+++.+++.++++....+ .++.+..+|+.+.+++ ++||+|++.. +++|+ .+...+++++.++|+|||.+
T Consensus 58 ~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l 133 (243)
T 3d2l_A 58 TGVDLSEEMLEIAQEKAMETN---RHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKL 133 (243)
T ss_dssp EEEESCHHHHHHHHHHHHHTT---CCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEE
T ss_pred EEEECCHHHHHHHHHhhhhcC---CceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEE
Confidence 999999999999999887654 4689999999888765 6899999987 88888 35678999999999999999
Q ss_pred EEEeccCCChHHHHHHHHHhhcc--------cc-c-----------cccccccCCCcchhhh-HHHHhcCCChHHHHHHH
Q 036563 204 LCLELSHVDIPVFKELYDYYSFS--------VI-P-----------AIGELVAGDRGSYQYL-VESVRRFPPQEKFAAMI 262 (288)
Q Consensus 204 ~i~~~~~~~~~~~~~~~~~~~~~--------~~-~-----------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 262 (288)
++... .+ ...........+. .. . .+..........|... .....++++.+++.++|
T Consensus 134 ~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 210 (243)
T 3d2l_A 134 LFDVH-SP--YKMETLFNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWL 210 (243)
T ss_dssp EEEEE-CH--HHHHTTTSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHH
T ss_pred EEEcC-CH--HHHHHhcCCcceeEECCCcEEEEEeecCccccEEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHH
Confidence 86322 11 1111100000000 00 0 0000000000001000 01123467999999999
Q ss_pred HHcCCcEEEEEEee-------CCeeEEEEeeeC
Q 036563 263 SDAGFQKVEYENLV-------GGVVAIHSGLKI 288 (288)
Q Consensus 263 ~~aGf~~v~~~~~~-------~~~~~~~~~~k~ 288 (288)
+++||+++++.... .+..-+++++|+
T Consensus 211 ~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K~ 243 (243)
T 3d2l_A 211 REAGFRVCAVTGDFKSDAPTETAERIFFVAEKI 243 (243)
T ss_dssp HHTTEEEEEEEETTSSSCCCTTCSEEEEEEEEC
T ss_pred HHCCCeEEEEecCcccCCCCCCceEEEEEEEeC
Confidence 99999999886431 234457778875
No 56
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.78 E-value=2.1e-17 Score=149.43 Aligned_cols=175 Identities=19% Similarity=0.196 Sum_probs=132.5
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+.+.++..++.+|||+|||+|.++..+++.. +..+++++|+ +.+++.++++....++. +
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-----------------~~~~~~~~D~-~~~~~~a~~~~~~~~~~-~ 233 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRA-----------------PHVSATVLEM-AGTVDTARSYLKDEGLS-D 233 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHC-----------------TTCEEEEEEC-TTHHHHHHHHHHHTTCT-T
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhC-----------------CCCEEEEecC-HHHHHHHHHHHHhcCCC-C
Confidence 345566666777899999999999999999886 4689999999 99999999998877665 5
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEEecc-CCChH--HHHHHHHHhhccc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCLELS-HVDIP--VFKELYDYYSFSV 227 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~-~~~~~--~~~~~~~~~~~~~ 227 (288)
+++++.+|+.+ +++. .||+|++..++|++++. ..+++++.++|+|||++++.+.. .++.. .+....+.....
T Consensus 234 ~v~~~~~d~~~-~~~~-~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~- 310 (360)
T 1tw3_A 234 RVDVVEGDFFE-PLPR-KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFTELDLRMLV- 310 (360)
T ss_dssp TEEEEECCTTS-CCSS-CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHHHHHHHHHH-
T ss_pred ceEEEeCCCCC-CCCC-CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhhhccHHHhh-
Confidence 89999999865 3343 49999999999999866 57999999999999999998877 44221 222222211100
Q ss_pred cccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCC----eeEEEEeeeC
Q 036563 228 IPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG----VVAIHSGLKI 288 (288)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~----~~~~~~~~k~ 288 (288)
..+ .+..+.++|.++|+++||+++++...... ...++.++|+
T Consensus 311 --~~~-----------------~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~ 356 (360)
T 1tw3_A 311 --FLG-----------------GALRTREKWDGLAASAGLVVEEVRQLPSPTIPYDLSLLVLAPA 356 (360)
T ss_dssp --HHS-----------------CCCCBHHHHHHHHHHTTEEEEEEEEEECSSSSCEEEEEEEEEC
T ss_pred --hcC-----------------CcCCCHHHHHHHHHHCCCeEEEEEeCCCCcccCccEEEEEEeC
Confidence 000 12458999999999999999999887543 2567777664
No 57
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.78 E-value=1.8e-18 Score=147.20 Aligned_cols=141 Identities=16% Similarity=0.091 Sum_probs=114.1
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+.+|||+|||+|.++..+++. +.+++++|+++.+++.++++....+.. .++.+..+|+.+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~-------------------~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~~ 126 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASP-------------------ERFVVGLDISESALAKANETYGSSPKA-EYFSFVKEDVFT 126 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBT-------------------TEEEEEECSCHHHHHHHHHHHTTSGGG-GGEEEECCCTTT
T ss_pred CCCEEEeCCCCCHHHHHHHhC-------------------CCeEEEEECCHHHHHHHHHHhhccCCC-cceEEEECchhc
Confidence 359999999999999888653 478999999999999999988664333 579999999988
Q ss_pred CCCCCCCeeEEEecccccccc--CHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcc
Q 036563 164 LCFEDSTMDGYTIAFGIRNVT--HIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGS 241 (288)
Q Consensus 164 ~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
++ ++++||+|++..++++++ +...+++++.++|+|||.+++.++...... .+. .
T Consensus 127 ~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~---------------------~~~--~ 182 (235)
T 3lcc_A 127 WR-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHV---------------------GGP--P 182 (235)
T ss_dssp CC-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCC---------------------SCS--S
T ss_pred CC-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccC---------------------CCC--C
Confidence 76 445899999999999998 788999999999999999998766443110 000 0
Q ss_pred hhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeC
Q 036563 242 YQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVG 277 (288)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~ 277 (288)
...+.+++.++|+++||+++++.....
T Consensus 183 ---------~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 209 (235)
T 3lcc_A 183 ---------YKVDVSTFEEVLVPIGFKAVSVEENPH 209 (235)
T ss_dssp ---------CCCCHHHHHHHHGGGTEEEEEEEECTT
T ss_pred ---------ccCCHHHHHHHHHHcCCeEEEEEecCC
Confidence 124789999999999999999887653
No 58
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.78 E-value=7.2e-18 Score=142.19 Aligned_cols=116 Identities=26% Similarity=0.338 Sum_probs=96.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
.+.+.+.+.++ ++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....+
T Consensus 27 ~~~~~l~~~~~--~~~~vLDlG~G~G~~~~~l~~~~-------------------~~v~~vD~s~~~~~~a~~~~~~~~- 84 (227)
T 1ve3_A 27 TLEPLLMKYMK--KRGKVLDLACGVGGFSFLLEDYG-------------------FEVVGVDISEDMIRKAREYAKSRE- 84 (227)
T ss_dssp HHHHHHHHSCC--SCCEEEEETCTTSHHHHHHHHTT-------------------CEEEEEESCHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHhcC--CCCeEEEEeccCCHHHHHHHHcC-------------------CEEEEEECCHHHHHHHHHHHHhcC-
Confidence 33444555544 36799999999999998888764 499999999999999999887654
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEeccc--cccccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFG--IRNVTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~--l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
.++.+..+|+.++++++++||+|+++.+ +++..+...+++++.++|+|||.+++.+..
T Consensus 85 --~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 85 --SNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp --CCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred --CCceEEECchhcCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 4799999999888777789999999999 555567889999999999999999987654
No 59
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.78 E-value=6.9e-18 Score=141.02 Aligned_cols=135 Identities=30% Similarity=0.395 Sum_probs=103.7
Q ss_pred HHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceE
Q 036563 48 VFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRI 127 (288)
Q Consensus 48 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v 127 (288)
+|+..+..|+.................++..+.. ++.+|||+|||+|.++..+ + ..++
T Consensus 2 ~fd~~a~~y~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~vLdiG~G~G~~~~~l----~-----------------~~~v 59 (211)
T 2gs9_A 2 PFASLAEAYEAWYGTPLGAYVIAEEERALKGLLP-PGESLLEVGAGTGYWLRRL----P-----------------YPQK 59 (211)
T ss_dssp TTTTTTTTTTGGGGSHHHHHHHHHHHHHHHTTCC-CCSEEEEETCTTCHHHHHC----C-----------------CSEE
T ss_pred chhhHHHHHHHHhcccchhhhHHHHHHHHHHhcC-CCCeEEEECCCCCHhHHhC----C-----------------CCeE
Confidence 4666777777653322211111222233343333 6789999999999988766 2 1389
Q ss_pred EEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 128 YVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 128 ~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+++|+++.+++.++++. +++.+..+|+.++++++++||+|++..+++|++++..+++++.++|+|||.+++..
T Consensus 60 ~~vD~s~~~~~~a~~~~-------~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 60 VGVEPSEAMLAVGRRRA-------PEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp EEECCCHHHHHHHHHHC-------TTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEeCCHHHHHHHHHhC-------CCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 99999999999998875 36889999999888888899999999999999999999999999999999999877
Q ss_pred ccCC
Q 036563 208 LSHV 211 (288)
Q Consensus 208 ~~~~ 211 (288)
....
T Consensus 133 ~~~~ 136 (211)
T 2gs9_A 133 LEAL 136 (211)
T ss_dssp ECTT
T ss_pred cCCc
Confidence 6543
No 60
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.78 E-value=4.6e-18 Score=145.14 Aligned_cols=151 Identities=18% Similarity=0.220 Sum_probs=115.1
Q ss_pred HHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 73 DRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 73 ~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
+.+...+. ..++.+|||||||+|.++..+++.. .+++++|+|+.+++.++++
T Consensus 30 ~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~-------------------~~v~gvD~s~~~~~~a~~~-------- 82 (240)
T 3dli_A 30 ARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEG-------------------IESIGVDINEDMIKFCEGK-------- 82 (240)
T ss_dssp HHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHT-------------------CCEEEECSCHHHHHHHHTT--------
T ss_pred HHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCC-------------------CcEEEEECCHHHHHHHHhh--------
Confidence 34444443 3456899999999999998888762 6899999999999988753
Q ss_pred CceEEEEcccccC--CCCCCCeeEEEeccccccccC--HHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccc
Q 036563 152 KSLLWVEGDAEAL--CFEDSTMDGYTIAFGIRNVTH--IEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSV 227 (288)
Q Consensus 152 ~~v~~~~~d~~~~--~~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
+.+..+|+.+. ++++++||+|++..+++|+++ ...+++++.++|+|||.+++.......... ....+.
T Consensus 83 --~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---~~~~~~--- 154 (240)
T 3dli_A 83 --FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYS---LINFYI--- 154 (240)
T ss_dssp --SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHH---HHHHTT---
T ss_pred --cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHH---HHHHhc---
Confidence 67888888775 677889999999999999984 489999999999999999987665432221 111110
Q ss_pred cccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 228 IPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
. . ....+++.+++.++|+++||++++...+.
T Consensus 155 --------~--~--------~~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 155 --------D--P--------THKKPVHPETLKFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp --------S--T--------TCCSCCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred --------C--c--------cccccCCHHHHHHHHHHCCCeEEEEEEec
Confidence 0 0 01125588999999999999999887764
No 61
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.77 E-value=2.1e-18 Score=144.92 Aligned_cols=119 Identities=13% Similarity=0.090 Sum_probs=98.8
Q ss_pred HHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 72 KDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 72 ~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
.+.+.+.+...++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++...+++.
T Consensus 18 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-----------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~ 80 (217)
T 3jwh_A 18 MNGVVAALKQSNARRVIDLGCGQGNLLKILLKDS-----------------FFEQITGVDVSYRSLEIAQERLDRLRLPR 80 (217)
T ss_dssp HHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-----------------TCSEEEEEESCHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-----------------CCCEEEEEECCHHHHHHHHHHHHHhcCCc
Confidence 3455555555667899999999999999998875 34799999999999999999987665530
Q ss_pred ---CceEEEEcccccCCCCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEEe
Q 036563 152 ---KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 152 ---~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.++.+..+|+...+.+.++||+|++..+++|+++. ..+++++.++|+|||.+++..
T Consensus 81 ~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 141 (217)
T 3jwh_A 81 NQWERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTP 141 (217)
T ss_dssp HHHTTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred ccCcceEEEeCCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 27999999987776666789999999999999855 789999999999999777543
No 62
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.77 E-value=4.2e-18 Score=140.63 Aligned_cols=149 Identities=15% Similarity=0.101 Sum_probs=117.5
Q ss_pred HHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 74 RLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
.+.+.+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....+++ +
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------------------~~v~~vD~s~~~~~~a~~~~~~~~~~--~ 81 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANG-------------------YDVDAWDKNAMSIANVERIKSIENLD--N 81 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTT-------------------CEEEEEESCHHHHHHHHHHHHHHTCT--T
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCC-------------------CeEEEEECCHHHHHHHHHHHHhCCCC--C
Confidence 34455665667899999999999999988862 79999999999999999988777653 6
Q ss_pred eEEEEcccccCCCCCCCeeEEEecccccccc--CHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccc
Q 036563 154 LLWVEGDAEALCFEDSTMDGYTIAFGIRNVT--HIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAI 231 (288)
Q Consensus 154 v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
+.+..+|+.+.++ +++||+|++..++++++ +...+++++.++|+|||.+++++....... .
T Consensus 82 ~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~---------~------- 144 (199)
T 2xvm_A 82 LHTRVVDLNNLTF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADY---------P------- 144 (199)
T ss_dssp EEEEECCGGGCCC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSS---------C-------
T ss_pred cEEEEcchhhCCC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCc---------C-------
Confidence 9999999998877 77899999999999987 788999999999999999887665433210 0
Q ss_pred cccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 232 GELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
.... + ...++.++++++|++ |++++....
T Consensus 145 ----~~~~--~-------~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 145 ----CTVG--F-------PFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp ----CCSC--C-------SCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred ----CCCC--C-------CCccCHHHHHHHhcC--CeEEEeccc
Confidence 0000 0 123478899999986 999887643
No 63
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.76 E-value=1.4e-17 Score=150.14 Aligned_cols=170 Identities=16% Similarity=0.131 Sum_probs=123.8
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..+.+.++..++.+|||||||+|..+..+++.+ +..+++++|+ +.++. +++....+.. +
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~-~~~~~--~~~~~~~~~~-~ 232 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREH-----------------PGLQGVLLDR-AEVVA--RHRLDAPDVA-G 232 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHC-----------------TTEEEEEEEC-HHHHT--TCCCCCGGGT-T
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHC-----------------CCCEEEEecC-HHHhh--cccccccCCC-C
Confidence 345666677778899999999999999999987 4688999999 44444 3333222333 5
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEEeccCCCh--HHHHHHHHHhhcccc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCLELSHVDI--PVFKELYDYYSFSVI 228 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~--~~~~~~~~~~~~~~~ 228 (288)
++++..+|+. .+.+ +||+|++..++|++++. ..+|++++++|||||++++.+...+.. +......+....
T Consensus 233 ~v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~~~~d~~~~--- 306 (348)
T 3lst_A 233 RWKVVEGDFL-REVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQSKEMDFMML--- 306 (348)
T ss_dssp SEEEEECCTT-TCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHHHHHHHHHH---
T ss_pred CeEEEecCCC-CCCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhhhcChhhh---
Confidence 7999999986 3344 79999999999999877 689999999999999999988765532 111111111110
Q ss_pred ccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 229 PAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
.. .. .+..+.++|.++|+++||+++++.. ..+...++.+++
T Consensus 307 ---~~---~~-----------~~~~t~~e~~~ll~~aGf~~~~~~~-~~~~~~vie~~p 347 (348)
T 3lst_A 307 ---AA---RT-----------GQERTAAELEPLFTAAGLRLDRVVG-TSSVMSIAVGVP 347 (348)
T ss_dssp ---HT---TS-----------CCCCBHHHHHHHHHHTTEEEEEEEE-CSSSCEEEEEEE
T ss_pred ---hc---CC-----------CcCCCHHHHHHHHHHCCCceEEEEE-CCCCcEEEEEEe
Confidence 00 00 0134789999999999999999988 666677776665
No 64
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.76 E-value=1.9e-17 Score=146.03 Aligned_cols=119 Identities=14% Similarity=0.137 Sum_probs=100.0
Q ss_pred HHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc-CCC
Q 036563 72 KDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER-GYP 150 (288)
Q Consensus 72 ~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~ 150 (288)
.+.+..... .++.+|||+|||+|..+..+++.+. +..+++++|+|+.+++.++++.... +..
T Consensus 26 ~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~----------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~ 88 (299)
T 3g5t_A 26 YKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELK----------------PFEQIIGSDLSATMIKTAEVIKEGSPDTY 88 (299)
T ss_dssp HHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSS----------------CCSEEEEEESCHHHHHHHHHHHHHCC-CC
T ss_pred HHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCC----------------CCCEEEEEeCCHHHHHHHHHHHHhccCCC
Confidence 344444433 4678999999999999999998642 3589999999999999999998775 222
Q ss_pred CCceEEEEcccccCCCCC------CCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 151 DKSLLWVEGDAEALCFED------STMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~------~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
+++.++.+|+.++++++ ++||+|++..+++++ ++..+++++.++|+|||.+++.++.
T Consensus 89 -~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 89 -KNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp -TTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred -CceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 68999999999887766 799999999999999 9999999999999999999985544
No 65
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.76 E-value=4.1e-18 Score=143.33 Aligned_cols=118 Identities=15% Similarity=0.123 Sum_probs=97.3
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC-
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD- 151 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~- 151 (288)
+.+.+.+...++.+|||+|||+|.++..+++.. +..+++++|+++.+++.++++....++++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-----------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~ 81 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-----------------SFEQITGVDVSYSVLERAKDRLKIDRLPEM 81 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHTST-----------------TCCEEEEEESCHHHHHHHHHHHTGGGSCHH
T ss_pred HHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcC-----------------CCCEEEEEECCHHHHHHHHHHHHhhccccc
Confidence 344455544567899999999999999998875 34799999999999999999987655430
Q ss_pred --CceEEEEcccccCCCCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEEe
Q 036563 152 --KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 152 --~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.++.+..+|+...+.+.++||+|++..+++|+++. ..+++++.++|+|||.++...
T Consensus 82 ~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~ 141 (219)
T 3jwg_A 82 QRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTP 141 (219)
T ss_dssp HHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEE
T ss_pred cCcceEEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEcc
Confidence 27999999997777767899999999999999865 789999999999999766543
No 66
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.76 E-value=3.2e-18 Score=146.96 Aligned_cols=137 Identities=21% Similarity=0.344 Sum_probs=99.6
Q ss_pred HHHhHhhHHHhhhhhhhhhhh--hHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCC
Q 036563 47 NVFSSVAKNYDLMNDLMSGGL--HRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEE 124 (288)
Q Consensus 47 ~~~~~~~~~y~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 124 (288)
+.|+..+..|+.......... .-.+...++......++.+|||+|||+|.++..+++..
T Consensus 3 ~~y~~~a~~yd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~------------------- 63 (252)
T 1wzn_A 3 ELYTLLAEYYDTIYRRRIERVKAEIDFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERG------------------- 63 (252)
T ss_dssp GGGTTTGGGHHHHTHHHHHTHHHHHHHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTT-------------------
T ss_pred hHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCC-------------------
Confidence 346666677765432111111 11222334444555567899999999999999988762
Q ss_pred ceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccc-ccccc--CHHHHHHHHHhhccCCc
Q 036563 125 TRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFG-IRNVT--HIEKALAEAYRVLKRGG 201 (288)
Q Consensus 125 ~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~-l~~~~--~~~~~l~~~~~~L~pgG 201 (288)
.+++++|+|+.|++.++++....+ .++.+..+|+.+++++ ++||+|++... +++.. +...+++++.++|+|||
T Consensus 64 ~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG 139 (252)
T 1wzn_A 64 YEVVGLDLHEEMLRVARRKAKERN---LKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGG 139 (252)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHTT---CCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred CeEEEEECCHHHHHHHHHHHHhcC---CceEEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCe
Confidence 789999999999999999887665 3689999999887754 58999998643 34433 56789999999999999
Q ss_pred EEEEE
Q 036563 202 RFLCL 206 (288)
Q Consensus 202 ~l~i~ 206 (288)
.+++.
T Consensus 140 ~li~~ 144 (252)
T 1wzn_A 140 VFITD 144 (252)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99863
No 67
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.76 E-value=5.7e-17 Score=136.51 Aligned_cols=142 Identities=24% Similarity=0.360 Sum_probs=108.6
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+.+|||+|||+|.++..++. . +++|+++.+++.++++ ++.+..+|+..
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~---------------------~--~~vD~s~~~~~~a~~~---------~~~~~~~d~~~ 95 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKI---------------------K--IGVEPSERMAEIARKR---------GVFVLKGTAEN 95 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTC---------------------C--EEEESCHHHHHHHHHT---------TCEEEECBTTB
T ss_pred CCcEEEeCCCCCHHHHHHHH---------------------H--hccCCCHHHHHHHHhc---------CCEEEEccccc
Confidence 67999999999999865421 2 9999999999998875 47889999988
Q ss_pred CCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchh
Q 036563 164 LCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQ 243 (288)
Q Consensus 164 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (288)
+++++++||+|++..++++++++..+++++.++|+|||.+++.+..... . ......... .+... +
T Consensus 96 ~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-~-~~~~~~~~~------~~~~~------~- 160 (219)
T 1vlm_A 96 LPLKDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRES-F-LGREYEKNK------EKSVF------Y- 160 (219)
T ss_dssp CCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSS-H-HHHHHHHTT------TC-CC------S-
T ss_pred CCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCcc-H-HHHHHHHHh------cCcch------h-
Confidence 8877789999999999999999999999999999999999987665432 2 122211110 00000 0
Q ss_pred hhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 244 YLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
...++++.+++.++|+++||+++++....
T Consensus 161 ----~~~~~~~~~~l~~~l~~~Gf~~~~~~~~~ 189 (219)
T 1vlm_A 161 ----KNARFFSTEELMDLMRKAGFEEFKVVQTL 189 (219)
T ss_dssp ----TTCCCCCHHHHHHHHHHTTCEEEEEEEEC
T ss_pred ----cccccCCHHHHHHHHHHCCCeEEEEeccc
Confidence 01235689999999999999999987653
No 68
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.75 E-value=5.8e-18 Score=141.29 Aligned_cols=149 Identities=14% Similarity=0.082 Sum_probs=110.7
Q ss_pred HhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC-------
Q 036563 76 VSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG------- 148 (288)
Q Consensus 76 ~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~------- 148 (288)
+..+...++.+|||+|||+|..+..+++.. .+|+|+|+|+.|++.++++.....
T Consensus 15 ~~~l~~~~~~~vLD~GCG~G~~~~~la~~g-------------------~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~ 75 (203)
T 1pjz_A 15 WSSLNVVPGARVLVPLCGKSQDMSWLSGQG-------------------YHVVGAELSEAAVERYFTERGEQPHITSQGD 75 (203)
T ss_dssp HHHHCCCTTCEEEETTTCCSHHHHHHHHHC-------------------CEEEEEEECHHHHHHHHHHHCSCSEEEEETT
T ss_pred HHhcccCCCCEEEEeCCCCcHhHHHHHHCC-------------------CeEEEEeCCHHHHHHHHHHccCCcccccccc
Confidence 344555677899999999999999998862 799999999999999988754210
Q ss_pred ---CCCCceEEEEcccccCCCCC-CCeeEEEeccccccccC--HHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHH
Q 036563 149 ---YPDKSLLWVEGDAEALCFED-STMDGYTIAFGIRNVTH--IEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDY 222 (288)
Q Consensus 149 ---~~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~ 222 (288)
....++++.++|+.++++.+ ++||+|++..++++++. ...++++++++|||||+++++....+..
T Consensus 76 ~~~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~--------- 146 (203)
T 1pjz_A 76 FKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA--------- 146 (203)
T ss_dssp EEEEECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS---------
T ss_pred cccccCCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc---------
Confidence 00147999999999887654 68999999999988863 4568999999999999955543332210
Q ss_pred hhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 223 YSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
. ..+. . ...+.+++.+++++ ||+++.+...
T Consensus 147 ----------~-~~~~--~---------~~~~~~el~~~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 147 ----------L-LEGP--P---------FSVPQTWLHRVMSG-NWEVTKVGGQ 176 (203)
T ss_dssp ----------S-SSSC--C---------CCCCHHHHHHTSCS-SEEEEEEEES
T ss_pred ----------c-cCCC--C---------CCCCHHHHHHHhcC-CcEEEEeccc
Confidence 0 0000 0 12378899999998 9998877654
No 69
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.75 E-value=2.8e-17 Score=149.38 Aligned_cols=166 Identities=18% Similarity=0.188 Sum_probs=121.0
Q ss_pred HHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 73 DRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 73 ~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
..++..++ ..+..+|||||||+|.++..+++.+ |..+++++|+ +.+++.+++.
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~-~~~~~~a~~~-------- 245 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKY-----------------PSINAINFDL-PHVIQDAPAF-------- 245 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHC-----------------TTCEEEEEEC-HHHHTTCCCC--------
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhC-----------------CCCEEEEEeh-HHHHHhhhhc--------
Confidence 34455554 5567899999999999999999987 5689999999 8887665431
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEEeccCCChH---HHH---HHHHHh
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCLELSHVDIP---VFK---ELYDYY 223 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~---~~~---~~~~~~ 223 (288)
++++++.+|+.+ +++.. |+|++..++|++++. .++|++++++|+|||++++.|...++.. ... ...+..
T Consensus 246 ~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~ 322 (368)
T 3reo_A 246 SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDAL 322 (368)
T ss_dssp TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHH
T ss_pred CCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHH
Confidence 589999999876 55643 999999999999764 4789999999999999999988765322 111 111111
Q ss_pred hccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 224 SFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
. +..... . +..+.++|+++|+++||+++++.....+.. ++.++|
T Consensus 323 ~------~~~~~~--g-----------~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~-vie~~k 366 (368)
T 3reo_A 323 M------LAYNPG--G-----------KERTEKEFQALAMASGFRGFKVASCAFNTY-VMEFLK 366 (368)
T ss_dssp H------HHHSSB--C-----------CCCCHHHHHHHHHHTTCCEEEEEEEETTEE-EEEEEC
T ss_pred H------HhhcCC--C-----------ccCCHHHHHHHHHHCCCeeeEEEEeCCCcE-EEEEEe
Confidence 1 000000 0 133789999999999999999998877655 444444
No 70
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.75 E-value=1.4e-17 Score=144.35 Aligned_cols=164 Identities=13% Similarity=0.058 Sum_probs=113.3
Q ss_pred CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC---------
Q 036563 80 NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP--------- 150 (288)
Q Consensus 80 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~--------- 150 (288)
+..++.+|||||||+|.++..++... ..+|+++|+|+.|++.+++++......
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~------------------~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~ 113 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDS------------------FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKF 113 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGT------------------EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhh------------------hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHH
Confidence 44567899999999998776555442 247999999999999998876432100
Q ss_pred ------------------CCceE-EEEcccccC-CC---CCCCeeEEEeccccccc----cCHHHHHHHHHhhccCCcEE
Q 036563 151 ------------------DKSLL-WVEGDAEAL-CF---EDSTMDGYTIAFGIRNV----THIEKALAEAYRVLKRGGRF 203 (288)
Q Consensus 151 ------------------~~~v~-~~~~d~~~~-~~---~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~pgG~l 203 (288)
..++. +..+|+.+. ++ ..++||+|++++++|++ ++...++++++++|||||.|
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~l 193 (263)
T 2a14_A 114 ACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHL 193 (263)
T ss_dssp HHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEE
T ss_pred HHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEE
Confidence 01233 888998773 32 25689999999999985 35578999999999999999
Q ss_pred EEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeC------
Q 036563 204 LCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVG------ 277 (288)
Q Consensus 204 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~------ 277 (288)
++.+....... . .+ ... +. ...++.+++.++|+++||+++++.....
T Consensus 194 i~~~~~~~~~~---------~------~g-----~~~-~~------~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~ 246 (263)
T 2a14_A 194 VTTVTLRLPSY---------M------VG-----KRE-FS------CVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTN 246 (263)
T ss_dssp EEEEESSCCEE---------E------ET-----TEE-EE------CCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTT
T ss_pred EEEEeecCccc---------e------eC-----CeE-ee------ccccCHHHHHHHHHHCCCEEEEEeeccccccccc
Confidence 98754321100 0 00 000 00 1145889999999999999999887531
Q ss_pred ---CeeEEEEeeeC
Q 036563 278 ---GVVAIHSGLKI 288 (288)
Q Consensus 278 ---~~~~~~~~~k~ 288 (288)
..+-+++++|+
T Consensus 247 ~~~~~~~~~~a~K~ 260 (263)
T 2a14_A 247 AANNGVCCIVARKK 260 (263)
T ss_dssp CCCCCEEEEEEEEC
T ss_pred CCCCceEEEEEEec
Confidence 13445666764
No 71
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.75 E-value=7.2e-17 Score=135.95 Aligned_cols=163 Identities=17% Similarity=0.199 Sum_probs=119.1
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+.+.+. .++.+|||+|||+|.++..+++. + .+++++|+++.+++.++++.
T Consensus 23 ~~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~-~------------------~~~~~~D~~~~~~~~~~~~~-------- 74 (230)
T 3cc8_A 23 PNLLKHIK-KEWKEVLDIGCSSGALGAAIKEN-G------------------TRVSGIEAFPEAAEQAKEKL-------- 74 (230)
T ss_dssp HHHHTTCC-TTCSEEEEETCTTSHHHHHHHTT-T------------------CEEEEEESSHHHHHHHHTTS--------
T ss_pred HHHHHHhc-cCCCcEEEeCCCCCHHHHHHHhc-C------------------CeEEEEeCCHHHHHHHHHhC--------
Confidence 34555555 56789999999999999988876 3 79999999999999887642
Q ss_pred ceEEEEccccc--CCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccccc
Q 036563 153 SLLWVEGDAEA--LCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPA 230 (288)
Q Consensus 153 ~v~~~~~d~~~--~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
..+..+|+.. .++++++||+|++..+++|++++..+++++.++|+|||.+++.............. .. .....
T Consensus 75 -~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~---~~-~~~~~ 149 (230)
T 3cc8_A 75 -DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPL---LA-GNWTY 149 (230)
T ss_dssp -SEEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHH---HT-TCCCC
T ss_pred -CcEEEcchhhcCCCCCCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHH---hc-CCcee
Confidence 3678888876 45667889999999999999999999999999999999999876554433222221 11 00000
Q ss_pred ccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeC
Q 036563 231 IGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVG 277 (288)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~ 277 (288)
. ... .......++++.+++.++|+++||++++......
T Consensus 150 ~------~~~---~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~ 187 (230)
T 3cc8_A 150 T------EYG---LLDKTHIRFFTFNEMLRMFLKAGYSISKVDRVYV 187 (230)
T ss_dssp B------SSS---TTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred c------cCC---CCCcceEEEecHHHHHHHHHHcCCeEEEEEeccc
Confidence 0 000 0000112356899999999999999999887643
No 72
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.75 E-value=3.9e-17 Score=136.88 Aligned_cols=165 Identities=21% Similarity=0.221 Sum_probs=119.1
Q ss_pred hHHHHHHHhHhhHHHhhhhhhhhhhh---hHHHHHHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhccc
Q 036563 42 SQLVSNVFSSVAKNYDLMNDLMSGGL---HRLWKDRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVL 117 (288)
Q Consensus 42 ~~~~~~~~~~~~~~y~~~~~~~~~~~---~~~~~~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~ 117 (288)
.....++|+..+..|+.....+.... .....+.+...+. ..++.+|||+|||+|.++..+ .
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l----~----------- 86 (215)
T 2zfu_A 22 SSAAQRLFQEDPEAFLLYHRGFQSQVKKWPLQPVDRIARDLRQRPASLVVADFGCGDCRLASSI----R----------- 86 (215)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHTSCTTSCEEEETCTTCHHHHHC----C-----------
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhhcccchhHHHHHHHHHhccCCCCeEEEECCcCCHHHHHh----h-----------
Confidence 34556777777777876543332110 0001112333332 356679999999999987655 1
Q ss_pred ccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhc
Q 036563 118 EDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVL 197 (288)
Q Consensus 118 ~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L 197 (288)
.+++++|+++. ++.+..+|+..+++++++||+|++..++|+ .++..+++++.++|
T Consensus 87 -------~~v~~~D~s~~-----------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L 141 (215)
T 2zfu_A 87 -------NPVHCFDLASL-----------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG-TNIRDFLEEANRVL 141 (215)
T ss_dssp -------SCEEEEESSCS-----------------STTEEESCTTSCSCCTTCEEEEEEESCCCS-SCHHHHHHHHHHHE
T ss_pred -------ccEEEEeCCCC-----------------CceEEEeccccCCCCCCCEeEEEEehhccc-cCHHHHHHHHHHhC
Confidence 57999999986 256788999888888889999999999974 88999999999999
Q ss_pred cCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeC
Q 036563 198 KRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVG 277 (288)
Q Consensus 198 ~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~ 277 (288)
+|||.+++.+.... +.+.+++.++|+++||+++.... ..
T Consensus 142 ~~gG~l~i~~~~~~----------------------------------------~~~~~~~~~~l~~~Gf~~~~~~~-~~ 180 (215)
T 2zfu_A 142 KPGGLLKVAEVSSR----------------------------------------FEDVRTFLRAVTKLGFKIVSKDL-TN 180 (215)
T ss_dssp EEEEEEEEEECGGG----------------------------------------CSCHHHHHHHHHHTTEEEEEEEC-CS
T ss_pred CCCeEEEEEEcCCC----------------------------------------CCCHHHHHHHHHHCCCEEEEEec-CC
Confidence 99999998764321 22678999999999999888544 45
Q ss_pred CeeEEEEeee
Q 036563 278 GVVAIHSGLK 287 (288)
Q Consensus 278 ~~~~~~~~~k 287 (288)
+.+.++.++|
T Consensus 181 ~~~~~~~~~k 190 (215)
T 2zfu_A 181 SHFFLFDFQK 190 (215)
T ss_dssp TTCEEEEEEE
T ss_pred CeEEEEEEEe
Confidence 5556666665
No 73
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.75 E-value=1.1e-18 Score=160.99 Aligned_cols=173 Identities=12% Similarity=0.131 Sum_probs=124.7
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
+.+.+.+.+.+...++.+|||||||+|.++..+++.. .+++++|+|+.+++.++++ +
T Consensus 93 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g-------------------~~v~gvD~s~~~~~~a~~~----~ 149 (416)
T 4e2x_A 93 AMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAG-------------------VRHLGFEPSSGVAAKAREK----G 149 (416)
T ss_dssp HHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTT-------------------CEEEEECCCHHHHHHHHTT----T
T ss_pred HHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcC-------------------CcEEEECCCHHHHHHHHHc----C
Confidence 3444667777777788899999999999999998763 6999999999999998875 2
Q ss_pred CCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccc
Q 036563 149 YPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVI 228 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
.+.....+...+...+++++++||+|++.++++|++++..++++++++|+|||.+++..... ........
T Consensus 150 ~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~------~~~~~~~~---- 219 (416)
T 4e2x_A 150 IRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYL------GDIVAKTS---- 219 (416)
T ss_dssp CCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECH------HHHHHHTC----
T ss_pred CCcceeeechhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCCh------HHhhhhcc----
Confidence 21001112233444455667889999999999999999999999999999999999754322 11111111
Q ss_pred ccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee--CCeeEEEEeee
Q 036563 229 PAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV--GGVVAIHSGLK 287 (288)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~--~~~~~~~~~~k 287 (288)
+..... ....+++.+++.++++++||++++...+. +|...++..++
T Consensus 220 --~~~~~~-----------~~~~~~s~~~l~~ll~~aGf~~~~~~~~~~~~g~l~~~~~~~ 267 (416)
T 4e2x_A 220 --FDQIFD-----------EHFFLFSATSVQGMAQRCGFELVDVQRLPVHGGEVRYTLARQ 267 (416)
T ss_dssp --GGGCST-----------TCCEECCHHHHHHHHHHTTEEEEEEEEECGGGSEEEEEEEET
T ss_pred --hhhhhh-----------hhhhcCCHHHHHHHHHHcCCEEEEEEEccCCCCEEEEEEEeC
Confidence 001000 01124589999999999999999998865 78877777654
No 74
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.74 E-value=4.6e-17 Score=147.77 Aligned_cols=166 Identities=17% Similarity=0.160 Sum_probs=121.0
Q ss_pred HHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 73 DRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 73 ~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
..++..++ ..+..+|||||||+|.++..+++.+ |..+++++|+ +.+++.+++.
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~-~~~~~~a~~~-------- 243 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHY-----------------PTIKGVNFDL-PHVISEAPQF-------- 243 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-----------------TTCEEEEEEC-HHHHTTCCCC--------
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHC-----------------CCCeEEEecC-HHHHHhhhhc--------
Confidence 34555555 5667899999999999999999987 5689999999 8887665431
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccC--HHHHHHHHHhhccCCcEEEEEeccCCChH---HHH---HHHHHh
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTH--IEKALAEAYRVLKRGGRFLCLELSHVDIP---VFK---ELYDYY 223 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~~~~---~~~---~~~~~~ 223 (288)
++++++.+|+.+ +++.. |+|++.+++|++++ ..++|+++++.|+|||++++.|...++.. ... ...+..
T Consensus 244 ~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~ 320 (364)
T 3p9c_A 244 PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMI 320 (364)
T ss_dssp TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHH
T ss_pred CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHH
Confidence 589999999987 66653 99999999999965 45899999999999999999998765421 111 111111
Q ss_pred hccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 224 SFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
. + ....+ . +..+.++|+++|+++||+++++.....+.. ++.++|
T Consensus 321 m------~-~~~~~-g-----------~~rt~~e~~~ll~~AGF~~v~~~~~~~~~~-vie~~k 364 (364)
T 3p9c_A 321 M------L-AHNPG-G-----------RERYEREFQALARGAGFTGVKSTYIYANAW-AIEFTK 364 (364)
T ss_dssp H------H-HHCSS-C-----------CCCBHHHHHHHHHHTTCCEEEEEEEETTEE-EEEEEC
T ss_pred H------H-hcccC-C-----------ccCCHHHHHHHHHHCCCceEEEEEcCCceE-EEEEeC
Confidence 0 0 00000 0 123789999999999999999998866543 444443
No 75
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.74 E-value=2.2e-17 Score=144.90 Aligned_cols=121 Identities=18% Similarity=0.149 Sum_probs=99.2
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
..+.+.+...+...++.+|||+|||+|.++..+++.. .+++++|+|+.|++.++++.....
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-------------------~~v~gvD~s~~~l~~a~~~~~~~~ 103 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEG-------------------FSVTSVDASDKMLKYALKERWNRR 103 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTT-------------------CEEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCC-------------------CeEEEEECCHHHHHHHHHhhhhcc
Confidence 4455666666665677899999999999999998873 699999999999999988763322
Q ss_pred CC--CCceEEEEcccccCC---CCCCCeeEEEec-cccccccC-------HHHHHHHHHhhccCCcEEEEEec
Q 036563 149 YP--DKSLLWVEGDAEALC---FEDSTMDGYTIA-FGIRNVTH-------IEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 149 ~~--~~~v~~~~~d~~~~~---~~~~~~D~v~~~-~~l~~~~~-------~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.. ..++.+..+|+..++ +++++||+|++. .+++|+.+ ...+++++.++|+|||++++...
T Consensus 104 ~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 104 KEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp TSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 11 136788899988876 677899999998 89999998 89999999999999999997543
No 76
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.74 E-value=4.7e-17 Score=148.01 Aligned_cols=166 Identities=17% Similarity=0.192 Sum_probs=122.6
Q ss_pred HHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 73 DRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 73 ~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
+.++..++ ..++.+|||||||+|.++..+++.. +..+++++|+ +.+++.+++.
T Consensus 198 ~~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-----------------~~~~~~~~D~-~~~~~~a~~~-------- 251 (372)
T 1fp1_D 198 KRMLEIYTGFEGISTLVDVGGGSGRNLELIISKY-----------------PLIKGINFDL-PQVIENAPPL-------- 251 (372)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHC-----------------TTCEEEEEEC-HHHHTTCCCC--------
T ss_pred HHHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHC-----------------CCCeEEEeCh-HHHHHhhhhc--------
Confidence 34555554 4567899999999999999999987 4678999999 8888766531
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccCHH--HHHHHHHhhccCCcEEEEEeccCCChHH------HHHHHHHh
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIE--KALAEAYRVLKRGGRFLCLELSHVDIPV------FKELYDYY 223 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~~~~~~------~~~~~~~~ 223 (288)
++++++.+|+.. +++. ||+|++..++|++++.. .+|++++++|+|||++++.+...+.... .....+..
T Consensus 252 ~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~ 328 (372)
T 1fp1_D 252 SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNL 328 (372)
T ss_dssp TTEEEEECCTTT-CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHH
T ss_pred CCCEEEeCCccc-CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHH
Confidence 479999999977 5554 99999999999998876 8999999999999999998876543211 11111111
Q ss_pred hccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 224 SFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
... ..+ .+..+.++|.++|+++||+++++.....|.+.++.++|
T Consensus 329 ~~~--------~~~------------~~~~t~~e~~~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 329 MFI--------TVG------------GRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp HHH--------HHS------------CCCEEHHHHHHHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred HHh--------ccC------------CccCCHHHHHHHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 000 000 01237899999999999999999887666236666554
No 77
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.74 E-value=3.3e-17 Score=144.46 Aligned_cols=185 Identities=18% Similarity=0.233 Sum_probs=120.4
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
..+.++..+...+ .+|||+|||+|.++..+++.. .+++++|+++.+++.++++....+..
T Consensus 71 ~~~~~~~~~~~~~-~~vLDlGcG~G~~~~~l~~~~-------------------~~v~gvD~s~~~~~~a~~~~~~~~~~ 130 (299)
T 3g2m_A 71 EAREFATRTGPVS-GPVLELAAGMGRLTFPFLDLG-------------------WEVTALELSTSVLAAFRKRLAEAPAD 130 (299)
T ss_dssp HHHHHHHHHCCCC-SCEEEETCTTTTTHHHHHTTT-------------------CCEEEEESCHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHHhhCCCC-CcEEEEeccCCHHHHHHHHcC-------------------CeEEEEECCHHHHHHHHHHHhhcccc
Confidence 3345566666544 499999999999999998873 78999999999999999998765320
Q ss_pred -CCceEEEEcccccCCCCCCCeeEEEec-ccccccc--CHHHHHHHHHhhccCCcEEEEEeccCCChH--------HHHH
Q 036563 151 -DKSLLWVEGDAEALCFEDSTMDGYTIA-FGIRNVT--HIEKALAEAYRVLKRGGRFLCLELSHVDIP--------VFKE 218 (288)
Q Consensus 151 -~~~v~~~~~d~~~~~~~~~~~D~v~~~-~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~--------~~~~ 218 (288)
..++.++.+|+.++++ +++||+|++. .++++++ +...+|+++.++|+|||.+++......... .+..
T Consensus 131 ~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~ 209 (299)
T 3g2m_A 131 VRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPG 209 (299)
T ss_dssp HHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC------
T ss_pred cccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeec
Confidence 0269999999998876 5789999975 5566665 357899999999999999998765543110 0000
Q ss_pred HHHH-hhcc--ccc-----cccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 219 LYDY-YSFS--VIP-----AIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 219 ~~~~-~~~~--~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
.... +... ..+ .+...................++++.++++++|+++||+++++..+.
T Consensus 210 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~ 275 (299)
T 3g2m_A 210 RSGRRYVLHVRHLPAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFA 275 (299)
T ss_dssp -------CCEEEEEEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEEC
T ss_pred CCCcEEEEEEEEeccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecC
Confidence 0000 0000 000 00000000000000000111235699999999999999999999886
No 78
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.73 E-value=8e-17 Score=145.40 Aligned_cols=156 Identities=20% Similarity=0.247 Sum_probs=117.3
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
..+..+|||||||+|.++..+++.+ |+.+++++|+ +.+++.+++. +++++..+|
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~-~~~~~~a~~~--------~~v~~~~~d 239 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-----------------PKLKCIVFDR-PQVVENLSGS--------NNLTYVGGD 239 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-----------------TTCEEEEEEC-HHHHTTCCCB--------TTEEEEECC
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-----------------CCCeEEEeeC-HHHHhhcccC--------CCcEEEecc
Confidence 3456799999999999999999987 4679999999 9888766531 469999999
Q ss_pred cccCCCCCCCeeEEEeccccccccCHH--HHHHHHHhhccC---CcEEEEEeccCCChHH------HHHHHHHhhccccc
Q 036563 161 AEALCFEDSTMDGYTIAFGIRNVTHIE--KALAEAYRVLKR---GGRFLCLELSHVDIPV------FKELYDYYSFSVIP 229 (288)
Q Consensus 161 ~~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~L~p---gG~l~i~~~~~~~~~~------~~~~~~~~~~~~~~ 229 (288)
+.. +++. ||+|++.+++|++++.. .+|++++++|+| ||++++.+...++... .....+...
T Consensus 240 ~~~-~~p~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~----- 311 (352)
T 1fp2_A 240 MFT-SIPN--ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNM----- 311 (352)
T ss_dssp TTT-CCCC--CSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHG-----
T ss_pred ccC-CCCC--ccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHH-----
Confidence 865 4443 99999999999998876 899999999999 9999998887654321 111111111
Q ss_pred cccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 230 AIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
+. .. . +..+.++|.++|+++||+++++... .+...++.++|
T Consensus 312 -~~--~~--g-----------~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~vie~~~ 352 (352)
T 1fp2_A 312 -AC--LN--G-----------KERNEEEWKKLFIEAGFQHYKISPL-TGFLSLIEIYP 352 (352)
T ss_dssp -GG--GT--C-----------CCEEHHHHHHHHHHTTCCEEEEEEE-ETTEEEEEEEC
T ss_pred -Hh--cc--C-----------CCCCHHHHHHHHHHCCCCeeEEEec-CCCcEEEEEeC
Confidence 00 00 0 1237899999999999999999884 45566666553
No 79
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.73 E-value=5.2e-17 Score=142.52 Aligned_cols=149 Identities=13% Similarity=0.123 Sum_probs=104.9
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC-------------
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY------------- 149 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~------------- 149 (288)
++.+|||||||+|.....++.. ...+|+++|+|+.|++.+++++.....
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~------------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~ 132 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS------------------HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACL 132 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG------------------GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc------------------CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHH
Confidence 6789999999999954333332 247999999999999999886542100
Q ss_pred ----C-----------CCceEEEEccccc-CC-----CCCCCeeEEEecccccc----ccCHHHHHHHHHhhccCCcEEE
Q 036563 150 ----P-----------DKSLLWVEGDAEA-LC-----FEDSTMDGYTIAFGIRN----VTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 150 ----~-----------~~~v~~~~~d~~~-~~-----~~~~~~D~v~~~~~l~~----~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
. ...+.++.+|+.. .+ +++++||+|+++.++++ .+++..+|+++.++|||||+|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~ 212 (289)
T 2g72_A 133 IEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLL 212 (289)
T ss_dssp HHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEE
T ss_pred hcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 0 0014567778877 44 33467999999999998 5678899999999999999999
Q ss_pred EEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 205 CLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 205 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
+.+...... +. . ... .+ ...+++.+++.++|+++||+++++..+.
T Consensus 213 ~~~~~~~~~---------~~------~-----~~~-~~------~~~~~~~~~l~~~l~~aGf~~~~~~~~~ 257 (289)
T 2g72_A 213 LIGALEESW---------YL------A-----GEA-RL------TVVPVSEEEVREALVRSGYKVRDLRTYI 257 (289)
T ss_dssp EEEEESCCE---------EE------E-----TTE-EE------ECCCCCHHHHHHHHHHTTEEEEEEEEEE
T ss_pred EEEecCcce---------EE------c-----CCe-ee------eeccCCHHHHHHHHHHcCCeEEEeeEee
Confidence 864221100 00 0 000 00 0125689999999999999999988765
No 80
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.73 E-value=2.4e-16 Score=131.16 Aligned_cols=116 Identities=18% Similarity=0.132 Sum_probs=98.0
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
..+..++..+...++.+|||+|||+|.++..+++.. +..+++++|+++.+++.++++....++
T Consensus 27 ~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~-----------------~~~~v~~vD~s~~~~~~a~~~~~~~~~ 89 (204)
T 3e05_A 27 EVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLM-----------------PNGRIFALERNPQYLGFIRDNLKKFVA 89 (204)
T ss_dssp HHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHC-----------------TTSEEEEEECCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHC-----------------CCCEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 344556677777888999999999999999999886 468999999999999999999887776
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+++.+..+|+.+.....++||+|++...++ +...+++++.++|+|||.+++..
T Consensus 90 --~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 90 --RNVTLVEAFAPEGLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp --TTEEEEECCTTTTCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred --CcEEEEeCChhhhhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEe
Confidence 489999999865533336799999988765 78899999999999999999754
No 81
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.73 E-value=5.5e-17 Score=136.01 Aligned_cols=115 Identities=15% Similarity=0.210 Sum_probs=98.2
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
.+.+.+...+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-------------------~~v~~vD~s~~~~~~a~~~~~~~-- 96 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC-------------------KRLTVIDVMPRAIGRACQRTKRW-- 96 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE-------------------EEEEEEESCHHHHHHHHHHTTTC--
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC-------------------CEEEEEECCHHHHHHHHHhcccC--
Confidence 344455556677778899999999999999988764 79999999999999999987664
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEeccccccccCH---HHHHHHHHhhccCCcEEEEEec
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI---EKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+++.+..+|+.+++ ++++||+|++..+++|++++ ..+++++.++|+|||.+++...
T Consensus 97 --~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 97 --SHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp --SSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred --CCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 47999999998887 56789999999999999987 5679999999999999997554
No 82
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.73 E-value=3.8e-16 Score=133.47 Aligned_cols=132 Identities=14% Similarity=0.075 Sum_probs=105.5
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|..+..++... +..+++++|+++.|++.++++....+++ +++++.+|+
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-----------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~ 129 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-----------------PHLHVTIVDSLNKRITFLEKLSEALQLE--NTTFCHDRA 129 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-----------------TTCEEEEEESCHHHHHHHHHHHHHHTCS--SEEEEESCH
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-----------------CCCEEEEEeCCHHHHHHHHHHHHHcCCC--CEEEEeccH
Confidence 457799999999999999998754 4589999999999999999998887764 699999999
Q ss_pred ccCCCC---CCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCC
Q 036563 162 EALCFE---DSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGD 238 (288)
Q Consensus 162 ~~~~~~---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
.++++. .++||+|++.. +.+...+++.+.++|+|||.+++...... ..
T Consensus 130 ~~~~~~~~~~~~fD~V~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~~-~~------------------------ 180 (240)
T 1xdz_A 130 ETFGQRKDVRESYDIVTARA----VARLSVLSELCLPLVKKNGLFVALKAASA-EE------------------------ 180 (240)
T ss_dssp HHHTTCTTTTTCEEEEEEEC----CSCHHHHHHHHGGGEEEEEEEEEEECC-C-HH------------------------
T ss_pred HHhcccccccCCccEEEEec----cCCHHHHHHHHHHhcCCCCEEEEEeCCCc-hH------------------------
Confidence 877643 56899999866 36788999999999999999987421110 00
Q ss_pred CcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 239 RGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
..+++.+.++++||++++...+.
T Consensus 181 ---------------~~~~~~~~l~~~g~~~~~~~~~~ 203 (240)
T 1xdz_A 181 ---------------ELNAGKKAITTLGGELENIHSFK 203 (240)
T ss_dssp ---------------HHHHHHHHHHHTTEEEEEEEEEE
T ss_pred ---------------HHHHHHHHHHHcCCeEeEEEEEe
Confidence 12456778999999998877653
No 83
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.73 E-value=2.4e-17 Score=137.32 Aligned_cols=155 Identities=23% Similarity=0.182 Sum_probs=114.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|..+..++... +.+++++|+|+.+++.++++....+ .++.+..+|+
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~------------------~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~ 80 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVED------------------GYKTYGIEISDLQLKKAENFSRENN---FKLNISKGDI 80 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHT------------------TCEEEEEECCHHHHHHHHHHHHHHT---CCCCEEECCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC------------------CCEEEEEECCHHHHHHHHHHHHhcC---CceEEEECch
Confidence 456799999999999855554442 4799999999999999999877654 4689999999
Q ss_pred ccCCCCCCCeeEEEeccccccc--cCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCC
Q 036563 162 EALCFEDSTMDGYTIAFGIRNV--THIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDR 239 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
..+++++++||+|++..+++|+ .+...+++++.++|+|||.+++.+++.++..... . .+ +..
T Consensus 81 ~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--------~-~~-~~~------ 144 (209)
T 2p8j_A 81 RKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNK--------G-EK-IGE------ 144 (209)
T ss_dssp TSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTC--------S-EE-EET------
T ss_pred hhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccc--------h-hh-hcc------
Confidence 9888878899999999999998 5778999999999999999999877654322100 0 00 000
Q ss_pred cchhhhH---HHHhcCCChHHHHHHHHHcCCcEEEEE
Q 036563 240 GSYQYLV---ESVRRFPPQEKFAAMISDAGFQKVEYE 273 (288)
Q Consensus 240 ~~~~~~~---~~~~~~~~~~~~~~~l~~aGf~~v~~~ 273 (288)
..|.... ....++++.+++.++|+++||...+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~~~ 181 (209)
T 2p8j_A 145 GEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKEDR 181 (209)
T ss_dssp TEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEEEE
T ss_pred ccceeccCCCceeEEecCHHHHHHHHhhcCceeeeee
Confidence 0000000 001235688999999999999776554
No 84
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.72 E-value=9.8e-17 Score=138.34 Aligned_cols=164 Identities=16% Similarity=0.146 Sum_probs=118.0
Q ss_pred CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC---------
Q 036563 80 NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP--------- 150 (288)
Q Consensus 80 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~--------- 150 (288)
+..++.+|||+|||+|.++..++... ..+++++|+|+.|++.++++....+..
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~------------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~ 114 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACES------------------FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTY 114 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGT------------------EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcc------------------cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhh
Confidence 44567799999999999988777653 148999999999999999887543200
Q ss_pred ------------------CCce-EEEEcccccCC-CCC---CCeeEEEeccccc----cccCHHHHHHHHHhhccCCcEE
Q 036563 151 ------------------DKSL-LWVEGDAEALC-FED---STMDGYTIAFGIR----NVTHIEKALAEAYRVLKRGGRF 203 (288)
Q Consensus 151 ------------------~~~v-~~~~~d~~~~~-~~~---~~~D~v~~~~~l~----~~~~~~~~l~~~~~~L~pgG~l 203 (288)
..++ .+..+|+.+.. +++ ++||+|++..+++ +..+...+++++.++|+|||.+
T Consensus 115 ~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l 194 (265)
T 2i62_A 115 VCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFL 194 (265)
T ss_dssp HHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEE
T ss_pred hhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEE
Confidence 0027 89999988764 244 7899999999999 5567889999999999999999
Q ss_pred EEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeC------
Q 036563 204 LCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVG------ 277 (288)
Q Consensus 204 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~------ 277 (288)
++.+..... .+. .+ ....+ ...++.+++.++|+++||+++++.....
T Consensus 195 i~~~~~~~~---------~~~------~~-----~~~~~-------~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~ 247 (265)
T 2i62_A 195 VMVDALKSS---------YYM------IG-----EQKFS-------SLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTT 247 (265)
T ss_dssp EEEEESSCC---------EEE------ET-----TEEEE-------CCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTT
T ss_pred EEEecCCCc---------eEE------cC-----Ccccc-------ccccCHHHHHHHHHHCCCEEEEEEEecccCCccc
Confidence 987643221 000 00 00000 1245788999999999999999887652
Q ss_pred ---CeeEEEEeeeC
Q 036563 278 ---GVVAIHSGLKI 288 (288)
Q Consensus 278 ---~~~~~~~~~k~ 288 (288)
..+.+++++|+
T Consensus 248 ~~~~~~~~~~a~K~ 261 (265)
T 2i62_A 248 SNNEGLFSLVGRKP 261 (265)
T ss_dssp BCCCCEEEEEEECC
T ss_pred cccceEEEEEeccc
Confidence 13445566664
No 85
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.72 E-value=2.1e-16 Score=129.60 Aligned_cols=141 Identities=19% Similarity=0.129 Sum_probs=112.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++. +++.+..+|+
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~-------------------~~v~~~D~~~~~~~~a~~~~-------~~~~~~~~d~ 98 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQG-------------------HDVLGTDLDPILIDYAKQDF-------PEARWVVGDL 98 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTT-------------------CEEEEEESCHHHHHHHHHHC-------TTSEEEECCT
T ss_pred cCCCeEEEECCCCCHHHHHHHHCC-------------------CcEEEEcCCHHHHHHHHHhC-------CCCcEEEccc
Confidence 467899999999999999888862 79999999999999998875 3688999999
Q ss_pred ccCCCCCCCeeEEEec-ccccccc--CHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCC
Q 036563 162 EALCFEDSTMDGYTIA-FGIRNVT--HIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGD 238 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~-~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
...++++++||+|++. .++++.. +...+++++.++|+|||.+++......
T Consensus 99 ~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~--------------------------- 151 (195)
T 3cgg_A 99 SVDQISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR--------------------------- 151 (195)
T ss_dssp TTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS---------------------------
T ss_pred ccCCCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC---------------------------
Confidence 8887777889999998 6777774 457899999999999999997542211
Q ss_pred CcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee-------CCeeEEEEeeeC
Q 036563 239 RGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV-------GGVVAIHSGLKI 288 (288)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~-------~~~~~~~~~~k~ 288 (288)
..+.+++.++++++||++++..... ....-+++++|+
T Consensus 152 -------------~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 152 -------------GWVFGDFLEVAERVGLELENAFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp -------------SCCHHHHHHHHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEEC
T ss_pred -------------CcCHHHHHHHHHHcCCEEeeeecccccCcCCCCCcEEEEEEecC
Confidence 1267899999999999998875431 233445555553
No 86
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.72 E-value=1e-16 Score=137.00 Aligned_cols=159 Identities=14% Similarity=0.095 Sum_probs=116.1
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
..++.+|||+|||+|.++..+++.. .+++++|+|+.+++.++++... .++.++.+|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~-------------------~~v~gvD~s~~~~~~a~~~~~~-----~~~~~~~~d 109 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFF-------------------PRVIGLDVSKSALEIAAKENTA-----ANISYRLLD 109 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHS-------------------SCEEEEESCHHHHHHHHHHSCC-----TTEEEEECC
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhC-------------------CCEEEEECCHHHHHHHHHhCcc-----cCceEEECc
Confidence 3567899999999999999998875 4899999999999999987632 479999999
Q ss_pred cccCCCCC-----CCeeEEEecccccccc--CHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccc
Q 036563 161 AEALCFED-----STMDGYTIAFGIRNVT--HIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGE 233 (288)
Q Consensus 161 ~~~~~~~~-----~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
+.+++... ..||+|++..++++++ +...+++++.++|+|||++++.++..+....+.......... ......
T Consensus 110 ~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 188 (245)
T 3ggd_A 110 GLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQL-PYELLL 188 (245)
T ss_dssp TTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSC-CHHHHH
T ss_pred ccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCC-chhhhh
Confidence 98754321 2489999999999998 789999999999999999999988876655444433321100 000000
Q ss_pred cccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 234 LVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
...... ....++.+++.++| +||++++....
T Consensus 189 ~~~~~~---------~~~~~~~~~~~~~~--aGf~~~~~~~~ 219 (245)
T 3ggd_A 189 VMEHGI---------RPGIFTAEDIELYF--PDFEILSQGEG 219 (245)
T ss_dssp HHTTTC---------CCCCCCHHHHHHHC--TTEEEEEEECC
T ss_pred ccccCC---------CCCccCHHHHHHHh--CCCEEEecccc
Confidence 000000 00134789999999 99999887543
No 87
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.72 E-value=3.6e-17 Score=144.01 Aligned_cols=154 Identities=15% Similarity=0.209 Sum_probs=107.7
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC------------
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP------------ 150 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~------------ 150 (288)
++.+|||||||+|.++..+++.+ +..+++++|+++.+++.|++++...+..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~-----------------~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~ 108 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKW-----------------GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGD 108 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHT-----------------CCSEEEEEESCHHHHHHHHHTC------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHc-----------------CCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccc
Confidence 57899999999999999999987 3579999999999999999886543211
Q ss_pred --------------------------------------------CCceEEEEcccccCC-----CCCCCeeEEEeccccc
Q 036563 151 --------------------------------------------DKSLLWVEGDAEALC-----FEDSTMDGYTIAFGIR 181 (288)
Q Consensus 151 --------------------------------------------~~~v~~~~~d~~~~~-----~~~~~~D~v~~~~~l~ 181 (288)
..++.+..+|+.... +..++||+|+|..+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~ 188 (292)
T 3g07_A 109 PGAEGEEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTK 188 (292)
T ss_dssp ---------------------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHH
T ss_pred cccccccccccccccccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHH
Confidence 047999999987543 4567899999999987
Q ss_pred ccc------CHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHH-hcCCC
Q 036563 182 NVT------HIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESV-RRFPP 254 (288)
Q Consensus 182 ~~~------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 254 (288)
++. +...++++++++|+|||+|++.... ..... .. ..+. ..+.+.. ..-+.
T Consensus 189 ~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~---~~~y~---~~------~~~~----------~~~~~~~~~~~~~ 246 (292)
T 3g07_A 189 WVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQP---WSSYG---KR------KTLT----------ETIYKNYYRIQLK 246 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCC---HHHHH---TT------TTSC----------HHHHHHHHHCCCC
T ss_pred HhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCC---chhhh---hh------hccc----------HHHHhhhhcEEEc
Confidence 664 6788999999999999999874211 11000 00 0000 0000111 11235
Q ss_pred hHHHHHHHHH--cCCcEEEEEEe
Q 036563 255 QEKFAAMISD--AGFQKVEYENL 275 (288)
Q Consensus 255 ~~~~~~~l~~--aGf~~v~~~~~ 275 (288)
++++.++|.+ +||+.+++...
T Consensus 247 p~~~~~~L~~~~~GF~~~~~~~~ 269 (292)
T 3g07_A 247 PEQFSSYLTSPDVGFSSYELVAT 269 (292)
T ss_dssp GGGHHHHHTSTTTCCCEEEEC--
T ss_pred HHHHHHHHHhcCCCceEEEEecc
Confidence 7899999999 99988877544
No 88
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.71 E-value=5.3e-16 Score=135.38 Aligned_cols=160 Identities=15% Similarity=0.110 Sum_probs=114.3
Q ss_pred HHHHHHHHhhcC-CCCCCeEEEecCCc---cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHh
Q 036563 69 RLWKDRLVSKLN-PFPGMKHLDVAGGT---GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRA 144 (288)
Q Consensus 69 ~~~~~~~~~~l~-~~~~~~vLDiG~G~---G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~ 144 (288)
+.+.+.+++.+. .....+|||||||+ |.++..+.+.. ++.+|+++|+|+.|++.+++++
T Consensus 62 ~~~~~~~~~~l~~~~~~~~vLDlGcG~pt~G~~~~~~~~~~-----------------p~~~v~~vD~sp~~l~~Ar~~~ 124 (274)
T 2qe6_A 62 RKVLVRGVRFLAGEAGISQFLDLGSGLPTVQNTHEVAQSVN-----------------PDARVVYVDIDPMVLTHGRALL 124 (274)
T ss_dssp HHHHHHHHHHHHTTTCCCEEEEETCCSCCSSCHHHHHHHHC-----------------TTCEEEEEESSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhhccCCCEEEEECCCCCCCChHHHHHHHhC-----------------CCCEEEEEECChHHHHHHHHhc
Confidence 344445555554 33446999999999 98877666654 4689999999999999999987
Q ss_pred hhcCCCCCceEEEEcccccCC-----------CCCCCeeEEEeccccccccC--HHHHHHHHHhhccCCcEEEEEeccCC
Q 036563 145 LERGYPDKSLLWVEGDAEALC-----------FEDSTMDGYTIAFGIRNVTH--IEKALAEAYRVLKRGGRFLCLELSHV 211 (288)
Q Consensus 145 ~~~~~~~~~v~~~~~d~~~~~-----------~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~ 211 (288)
... +++.++.+|+.+.. ++.++||+|++..++|++++ +..+|++++++|+|||+|++.+....
T Consensus 125 ~~~----~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~ 200 (274)
T 2qe6_A 125 AKD----PNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDT 200 (274)
T ss_dssp TTC----TTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCS
T ss_pred CCC----CCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCc
Confidence 542 58999999986531 22247999999999999986 78999999999999999999887653
Q ss_pred ChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEE
Q 036563 212 DIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVE 271 (288)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 271 (288)
...........+.. .+. ..++.+.+++..+| .||++++
T Consensus 201 ~~~~~~~~~~~~~~-----~~~---------------~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 201 GLPAQQKLARITRE-----NLG---------------EGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp SCHHHHHHHHHHHH-----HHS---------------CCCCBCHHHHHHTT--TTCEECT
T ss_pred chHHHHHHHHHHHh-----cCC---------------CCccCCHHHHHHHh--CCCeEcc
Confidence 21122222221110 000 01245889999999 5998775
No 89
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.71 E-value=3.6e-16 Score=136.42 Aligned_cols=155 Identities=15% Similarity=0.176 Sum_probs=122.9
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
+.+.+.+...+. .++.+|||+|||+|.++..++... +..+++++|+|+.+++.++++....+
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~-----------------~~~~v~~vD~s~~~l~~a~~n~~~~~ 157 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASER-----------------PDCEIIAVDRMPDAVSLAQRNAQHLA 157 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHC-----------------TTSEEEEECSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhC-----------------CCCEEEEEECCHHHHHHHHHHHHHcC
Confidence 344455666665 556799999999999999999876 45899999999999999999988777
Q ss_pred CCCCceEEEEcccccCCCCCCCeeEEEecccccc-------------c------------cCHHHHHHHHHhhccCCcEE
Q 036563 149 YPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRN-------------V------------THIEKALAEAYRVLKRGGRF 203 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~-------------~------------~~~~~~l~~~~~~L~pgG~l 203 (288)
++ ++.+..+|+... ++.++||+|+++..+.. . .....+++++.++|+|||.+
T Consensus 158 ~~--~v~~~~~d~~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l 234 (276)
T 2b3t_A 158 IK--NIHILQSDWFSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFL 234 (276)
T ss_dssp CC--SEEEECCSTTGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred CC--ceEEEEcchhhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEE
Confidence 64 799999998764 33568999999854332 2 13467899999999999999
Q ss_pred EEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEE
Q 036563 204 LCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIH 283 (288)
Q Consensus 204 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~ 283 (288)
++... +.+.+++.++++++||+.+++.....|...++
T Consensus 235 ~~~~~-------------------------------------------~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~ 271 (276)
T 2b3t_A 235 LLEHG-------------------------------------------WQQGEAVRQAFILAGYHDVETCRDYGDNERVT 271 (276)
T ss_dssp EEECC-------------------------------------------SSCHHHHHHHHHHTTCTTCCEEECTTSSEEEE
T ss_pred EEEEC-------------------------------------------chHHHHHHHHHHHCCCcEEEEEecCCCCCcEE
Confidence 86310 12567889999999999998888888888888
Q ss_pred Eeee
Q 036563 284 SGLK 287 (288)
Q Consensus 284 ~~~k 287 (288)
.++|
T Consensus 272 ~~~~ 275 (276)
T 2b3t_A 272 LGRY 275 (276)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8876
No 90
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.71 E-value=2.1e-16 Score=128.19 Aligned_cols=117 Identities=21% Similarity=0.266 Sum_probs=95.9
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
+.++..++..+...++.+|||+|||+|.++..+++.. +..+++++|+++.+++.++++....+
T Consensus 11 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-----------------~~~~v~~vD~~~~~~~~a~~~~~~~~ 73 (178)
T 3hm2_A 11 QHVRALAISALAPKPHETLWDIGGGSGSIAIEWLRST-----------------PQTTAVCFEISEERRERILSNAINLG 73 (178)
T ss_dssp HHHHHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-----------------SSEEEEEECSCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-----------------CCCeEEEEeCCHHHHHHHHHHHHHhC
Confidence 3455667777777788899999999999999999886 46899999999999999999988877
Q ss_pred CCCCceEEEEccccc-CCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 149 YPDKSLLWVEGDAEA-LCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~-~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
++ .++ ++.+|... ++...++||+|++...+++ ..+++++.++|+|||.+++...
T Consensus 74 ~~-~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 74 VS-DRI-AVQQGAPRAFDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp CT-TSE-EEECCTTGGGGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEEC
T ss_pred CC-CCE-EEecchHhhhhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEee
Confidence 65 478 88888743 3333378999999998876 6789999999999999997654
No 91
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.70 E-value=7e-16 Score=128.77 Aligned_cols=137 Identities=16% Similarity=0.151 Sum_probs=109.3
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
....+...+...++.+|||+|||+|.++..+++. + .+++++|+++.+++.++++....+++
T Consensus 43 ~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~-~------------------~~v~~vD~s~~~~~~a~~~~~~~g~~ 103 (204)
T 3njr_A 43 MRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA-G------------------GRAITIEPRADRIENIQKNIDTYGLS 103 (204)
T ss_dssp HHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT-T------------------CEEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc-C------------------CEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 3345667777778889999999999999999887 3 89999999999999999998887774
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccccc
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPA 230 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
.+++++.+|+.+.......||+|++...+ +.. +++++.+.|+|||.+++......
T Consensus 104 -~~v~~~~~d~~~~~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~------------------- 158 (204)
T 3njr_A 104 -PRMRAVQGTAPAALADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLE------------------- 158 (204)
T ss_dssp -TTEEEEESCTTGGGTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHH-------------------
T ss_pred -CCEEEEeCchhhhcccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcc-------------------
Confidence 48999999988743233579999987744 456 99999999999999997543210
Q ss_pred ccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEE
Q 036563 231 IGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYEN 274 (288)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 274 (288)
+..++.+.+++.||++..+..
T Consensus 159 -----------------------~~~~~~~~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 159 -----------------------SETLLTQLHARHGGQLLRIDI 179 (204)
T ss_dssp -----------------------HHHHHHHHHHHHCSEEEEEEE
T ss_pred -----------------------cHHHHHHHHHhCCCcEEEEEe
Confidence 345677889999998877653
No 92
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.70 E-value=2.7e-17 Score=137.12 Aligned_cols=156 Identities=17% Similarity=0.203 Sum_probs=103.1
Q ss_pred HHHHHHHHhhcCC-CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc
Q 036563 69 RLWKDRLVSKLNP-FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER 147 (288)
Q Consensus 69 ~~~~~~~~~~l~~-~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 147 (288)
+.+.+.+.+.+.. .++.+|||+|||+|.++..+++.. +..+++++|+++.+++.++++....
T Consensus 15 ~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~-----------------~~~~v~~vD~~~~~~~~a~~~~~~~ 77 (215)
T 4dzr_A 15 EVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALAC-----------------PGVSVTAVDLSMDALAVARRNAERF 77 (215)
T ss_dssp HHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHC-----------------TTEEEEEEECC--------------
T ss_pred HHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhC-----------------CCCeEEEEECCHHHHHHHHHHHHHh
Confidence 3444556666654 667899999999999999999986 4579999999999999999887765
Q ss_pred CCCCCceEEEEcccccCCCCC-----CCeeEEEeccccccccCH--------------------------HHHHHHHHhh
Q 036563 148 GYPDKSLLWVEGDAEALCFED-----STMDGYTIAFGIRNVTHI--------------------------EKALAEAYRV 196 (288)
Q Consensus 148 ~~~~~~v~~~~~d~~~~~~~~-----~~~D~v~~~~~l~~~~~~--------------------------~~~l~~~~~~ 196 (288)
+. ++++..+|+.+ ++++ ++||+|+++..++...+. ..+++++.++
T Consensus 78 ~~---~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 153 (215)
T 4dzr_A 78 GA---VVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYV 153 (215)
T ss_dssp --------CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGG
T ss_pred CC---ceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHH
Confidence 43 67888888876 4443 789999997665433221 6788999999
Q ss_pred ccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHH--HcCCcEEEEEE
Q 036563 197 LKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMIS--DAGFQKVEYEN 274 (288)
Q Consensus 197 L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~aGf~~v~~~~ 274 (288)
|+|||.+++.+... ...+.+.++++ ++||..+++..
T Consensus 154 LkpgG~l~~~~~~~------------------------------------------~~~~~~~~~l~~~~~gf~~~~~~~ 191 (215)
T 4dzr_A 154 LARGRAGVFLEVGH------------------------------------------NQADEVARLFAPWRERGFRVRKVK 191 (215)
T ss_dssp BCSSSEEEEEECTT------------------------------------------SCHHHHHHHTGGGGGGTEECCEEE
T ss_pred hcCCCeEEEEEECC------------------------------------------ccHHHHHHHHHHhhcCCceEEEEE
Confidence 99999955543321 14567788899 99999988888
Q ss_pred eeCCeeEEEEeee
Q 036563 275 LVGGVVAIHSGLK 287 (288)
Q Consensus 275 ~~~~~~~~~~~~k 287 (288)
...|...++.++|
T Consensus 192 ~~~~~~r~~~~~~ 204 (215)
T 4dzr_A 192 DLRGIDRVIAVTR 204 (215)
T ss_dssp CTTSCEEEEEEEE
T ss_pred ecCCCEEEEEEEE
Confidence 7778777777765
No 93
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.70 E-value=4.5e-16 Score=134.18 Aligned_cols=145 Identities=11% Similarity=0.006 Sum_probs=108.7
Q ss_pred CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh----------cCC
Q 036563 80 NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE----------RGY 149 (288)
Q Consensus 80 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~----------~~~ 149 (288)
...++.+|||+|||+|..+..+++.. .+|+|+|+|+.|++.++++... .+.
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~G-------------------~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~ 125 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADRG-------------------HTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGA 125 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHTT-------------------CEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTC
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHCC-------------------CeEEEEECCHHHHHHHHHhcccccccccccccccc
Confidence 33467899999999999999998863 7999999999999999876531 000
Q ss_pred -----CCCceEEEEcccccCCCCC-CCeeEEEecccccccc--CHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHH
Q 036563 150 -----PDKSLLWVEGDAEALCFED-STMDGYTIAFGIRNVT--HIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYD 221 (288)
Q Consensus 150 -----~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~ 221 (288)
...++++.++|+.++++.+ ++||+|++..++++++ +...+++++.++|||||.++++.+......
T Consensus 126 ~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~~------- 198 (252)
T 2gb4_A 126 KVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPTK------- 198 (252)
T ss_dssp EEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTTS-------
T ss_pred cccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCcc-------
Confidence 0157999999999887654 7899999999998886 356799999999999999976544322100
Q ss_pred HhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 222 YYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
. .+. . ...+.+++.++|.+ +|+++.....
T Consensus 199 ---------~----~g~--~---------~~~~~~el~~~l~~-~f~v~~~~~~ 227 (252)
T 2gb4_A 199 ---------H----AGP--P---------FYVPSAELKRLFGT-KCSMQCLEEV 227 (252)
T ss_dssp ---------C----CCS--S---------CCCCHHHHHHHHTT-TEEEEEEEEE
T ss_pred ---------C----CCC--C---------CCCCHHHHHHHhhC-CeEEEEEecc
Confidence 0 000 0 12478999999987 5998887654
No 94
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.69 E-value=5.4e-16 Score=128.53 Aligned_cols=143 Identities=20% Similarity=0.267 Sum_probs=110.4
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++ +|||+|||+|.++..+++.. .+++++|+++.+++.++++....+ .++.+..+|+.
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~-------------------~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~d~~ 86 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLG-------------------YEVTAVDQSSVGLAKAKQLAQEKG---VKITTVQSNLA 86 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTT-------------------CEEEEECSSHHHHHHHHHHHHHHT---CCEEEECCBTT
T ss_pred CC-CEEEECCCCCHhHHHHHhCC-------------------CeEEEEECCHHHHHHHHHHHHhcC---CceEEEEcChh
Confidence 45 99999999999998888762 799999999999999999887664 36899999998
Q ss_pred cCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcch
Q 036563 163 ALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSY 242 (288)
Q Consensus 163 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (288)
..++++++||+|++.....+..+...+++++.++|+|||.+++......... +. .+ ....
T Consensus 87 ~~~~~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~--------~~------~~----~~~~-- 146 (202)
T 2kw5_A 87 DFDIVADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQ--------YN------TG----GPKD-- 146 (202)
T ss_dssp TBSCCTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGG--------GT------SC----CSSS--
T ss_pred hcCCCcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecccccc--------CC------CC----CCCc--
Confidence 8887778999999965422224678899999999999999998776553221 00 00 0000
Q ss_pred hhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 243 QYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
...+++.+++.++|+ ||+++......
T Consensus 147 ------~~~~~~~~~l~~~l~--Gf~v~~~~~~~ 172 (202)
T 2kw5_A 147 ------LDLLPKLETLQSELP--SLNWLIANNLE 172 (202)
T ss_dssp ------GGGCCCHHHHHHHCS--SSCEEEEEEEE
T ss_pred ------ceeecCHHHHHHHhc--CceEEEEEEEE
Confidence 123569999999999 99999887654
No 95
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.69 E-value=2.9e-16 Score=133.18 Aligned_cols=108 Identities=19% Similarity=0.217 Sum_probs=91.5
Q ss_pred hcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEE
Q 036563 78 KLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWV 157 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~ 157 (288)
.++.+|+.+|||+|||+|.++..+++..+ +.++|+++|+++.|++.++++.... +|+..+
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG----------------~~G~V~avD~s~~~~~~l~~~a~~~----~ni~~V 131 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIG----------------PRGRIYGVEFAPRVMRDLLTVVRDR----RNIFPI 131 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHC----------------TTCEEEEEECCHHHHHHHHHHSTTC----TTEEEE
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhC----------------CCceEEEEeCCHHHHHHHHHhhHhh----cCeeEE
Confidence 46678999999999999999999999986 6799999999999999998887665 589999
Q ss_pred EcccccC---CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 158 EGDAEAL---CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 158 ~~d~~~~---~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.+|.... +...+.+|+|++.. .+..+...++.++.+.|||||.+++..
T Consensus 132 ~~d~~~p~~~~~~~~~vDvVf~d~--~~~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 132 LGDARFPEKYRHLVEGVDGLYADV--AQPEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp ESCTTCGGGGTTTCCCEEEEEECC--CCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeccCccccccccceEEEEEEec--cCChhHHHHHHHHHHhccCCCEEEEEE
Confidence 9887653 45567899998754 344567889999999999999998754
No 96
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.69 E-value=7.1e-16 Score=128.28 Aligned_cols=138 Identities=14% Similarity=0.134 Sum_probs=111.8
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..+++. +..+++++|+++.+++.++++....+.. ++.+..+|+
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~------------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~ 118 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL------------------GAKSVLATDISDESMTAAEENAALNGIY--DIALQKTSL 118 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT------------------TCSEEEEEESCHHHHHHHHHHHHHTTCC--CCEEEESST
T ss_pred cCCCEEEEECCCCCHHHHHHHHC------------------CCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEeccc
Confidence 35789999999999999988765 2469999999999999999999887764 499999998
Q ss_pred ccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcc
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGS 241 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
.+. .+++||+|+++..+++ ...+++++.++|+|||.+++.+....
T Consensus 119 ~~~--~~~~fD~i~~~~~~~~---~~~~l~~~~~~L~~gG~l~~~~~~~~------------------------------ 163 (205)
T 3grz_A 119 LAD--VDGKFDLIVANILAEI---LLDLIPQLDSHLNEDGQVIFSGIDYL------------------------------ 163 (205)
T ss_dssp TTT--CCSCEEEEEEESCHHH---HHHHGGGSGGGEEEEEEEEEEEEEGG------------------------------
T ss_pred ccc--CCCCceEEEECCcHHH---HHHHHHHHHHhcCCCCEEEEEecCcc------------------------------
Confidence 764 3578999999887765 47889999999999999997543221
Q ss_pred hhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 242 YQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
+.+++.++++++||++++... ..+...+....+
T Consensus 164 ------------~~~~~~~~~~~~Gf~~~~~~~-~~~w~~~~~~~~ 196 (205)
T 3grz_A 164 ------------QLPKIEQALAENSFQIDLKMR-AGRWIGLAISRK 196 (205)
T ss_dssp ------------GHHHHHHHHHHTTEEEEEEEE-ETTEEEEEEEEC
T ss_pred ------------cHHHHHHHHHHcCCceEEeec-cCCEEEEEEecc
Confidence 356788999999999988766 466777666554
No 97
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.69 E-value=1.3e-15 Score=124.63 Aligned_cols=119 Identities=17% Similarity=0.175 Sum_probs=98.1
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
..+.+++.+...++.+|||+|||+|.++..+++. . .+++++|+++.+++.++++....++.
T Consensus 40 ~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~------------------~~v~~~D~~~~~~~~a~~~~~~~~~~ 100 (194)
T 1dus_A 40 GTKILVENVVVDKDDDILDLGCGYGVIGIALADE-V------------------KSTTMADINRRAIKLAKENIKLNNLD 100 (194)
T ss_dssp HHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-S------------------SEEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-C------------------CeEEEEECCHHHHHHHHHHHHHcCCC
Confidence 3456677777778889999999999999988876 2 79999999999999999998877664
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEecccccc-ccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRN-VTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~-~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
+.++.+..+|+.+. .++++||+|+++..+++ ..+...+++++.++|+|||.+++....
T Consensus 101 ~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 159 (194)
T 1dus_A 101 NYDIRVVHSDLYEN-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQT 159 (194)
T ss_dssp TSCEEEEECSTTTT-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred ccceEEEECchhcc-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECC
Confidence 11499999998764 34668999999988876 346778999999999999999986543
No 98
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.68 E-value=8.9e-16 Score=127.72 Aligned_cols=100 Identities=16% Similarity=0.185 Sum_probs=86.2
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..++... +..+++++|+++.+++.++++....++. ++.+..+|+.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-----------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~v~~~~~d~~ 125 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-----------------PEAHFTLLDSLGKRVRFLRQVQHELKLE--NIEPVQSRVE 125 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-----------------TTSEEEEEESCHHHHHHHHHHHHHTTCS--SEEEEECCTT
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-----------------CCCEEEEEeCCHHHHHHHHHHHHHcCCC--CeEEEecchh
Confidence 46799999999999999999876 4589999999999999999998887764 5999999998
Q ss_pred cCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 163 ALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 163 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
..+ +.++||+|+++. +.+...+++++.++|+|||.+++.
T Consensus 126 ~~~-~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 126 EFP-SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp TSC-CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred hCC-ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 765 456899999754 356789999999999999999974
No 99
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.68 E-value=5.2e-16 Score=140.37 Aligned_cols=156 Identities=18% Similarity=0.260 Sum_probs=116.4
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.+..+|||||||+|.++..+++.+ +..+++++|+ +.+++.+++ . +++++..+|+
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~-----------------p~~~~~~~D~-~~~~~~a~~------~--~~v~~~~~d~ 245 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIF-----------------PHLKCTVFDQ-PQVVGNLTG------N--ENLNFVGGDM 245 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHC-----------------TTSEEEEEEC-HHHHSSCCC------C--SSEEEEECCT
T ss_pred cCCCEEEEECCCcCHHHHHHHHHC-----------------CCCeEEEecc-HHHHhhccc------C--CCcEEEeCcc
Confidence 345799999999999999999987 4678999999 788765543 1 4699999998
Q ss_pred ccCCCCCCCeeEEEeccccccccCHH--HHHHHHHhhccC---CcEEEEEeccCCChH------HHHHHHHHhhcccccc
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHIE--KALAEAYRVLKR---GGRFLCLELSHVDIP------VFKELYDYYSFSVIPA 230 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~L~p---gG~l~i~~~~~~~~~------~~~~~~~~~~~~~~~~ 230 (288)
.. +++ .||+|++.+++|++++.. .+|++++++|+| ||++++.+...++.. ......+...
T Consensus 246 ~~-~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~------ 316 (358)
T 1zg3_A 246 FK-SIP--SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVM------ 316 (358)
T ss_dssp TT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHH------
T ss_pred CC-CCC--CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHH------
Confidence 76 555 499999999999998866 999999999999 999999887655321 1111111110
Q ss_pred ccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEeee
Q 036563 231 IGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGLK 287 (288)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~k 287 (288)
+. . .+ .+..+.++|+++|+++||+++++... .+...++.++|
T Consensus 317 ~~-~-~~------------g~~~t~~e~~~ll~~aGf~~~~~~~~-~~~~~vie~~~ 358 (358)
T 1zg3_A 317 LT-M-FL------------GKERTKQEWEKLIYDAGFSSYKITPI-SGFKSLIEVYP 358 (358)
T ss_dssp HH-H-HS------------CCCEEHHHHHHHHHHTTCCEEEEEEE-TTTEEEEEEEC
T ss_pred hc-c-CC------------CCCCCHHHHHHHHHHcCCCeeEEEec-CCCcEEEEEeC
Confidence 00 0 00 01347899999999999999999884 56666666553
No 100
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.68 E-value=5.2e-17 Score=138.66 Aligned_cols=138 Identities=16% Similarity=0.221 Sum_probs=101.5
Q ss_pred HHHHhHhhHHHhhhhhhh---h----hhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccc
Q 036563 46 SNVFSSVAKNYDLMNDLM---S----GGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLE 118 (288)
Q Consensus 46 ~~~~~~~~~~y~~~~~~~---~----~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~ 118 (288)
+..|++.+..|+...... . ..+...+.+.+...+. .++.+|||||||+|..+..+++..
T Consensus 17 ~~~w~~~~~~yd~~~~~l~~~g~~vm~~we~~~m~~~a~~~~-~~G~rVLdiG~G~G~~~~~~~~~~------------- 82 (236)
T 3orh_A 17 SPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAAS-SKGGRVLEVGFGMAIAASKVQEAP------------- 82 (236)
T ss_dssp HHHHTTSCEEECTTSSEEEETTEEEEEGGGHHHHHHHHHHHT-TTCEEEEEECCTTSHHHHHHTTSC-------------
T ss_pred hhhHhcCcCCCCcchhhhhhcCHHHHHHHHHHHHHHHHHhhc-cCCCeEEEECCCccHHHHHHHHhC-------------
Confidence 344666666776432110 1 1122233334444443 467899999999999999888764
Q ss_pred cccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccC--CCCCCCeeEEEe-----ccccccccCHHHHHH
Q 036563 119 DDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEAL--CFEDSTMDGYTI-----AFGIRNVTHIEKALA 191 (288)
Q Consensus 119 ~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~D~v~~-----~~~l~~~~~~~~~l~ 191 (288)
..+++++|+++.+++.++++....+ .++.++.+|+... .+++++||.|+. ...++|..+...+++
T Consensus 83 -----~~~v~~id~~~~~~~~a~~~~~~~~---~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~ 154 (236)
T 3orh_A 83 -----IDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKN 154 (236)
T ss_dssp -----EEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHH
T ss_pred -----CcEEEEEeCCHHHHHHHHHHHhhCC---CceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhh
Confidence 2689999999999999999887765 4788899988654 467788999975 344567778899999
Q ss_pred HHHhhccCCcEEEE
Q 036563 192 EAYRVLKRGGRFLC 205 (288)
Q Consensus 192 ~~~~~L~pgG~l~i 205 (288)
++.|+|||||.|++
T Consensus 155 e~~rvLkPGG~l~f 168 (236)
T 3orh_A 155 HAFRLLKPGGVLTY 168 (236)
T ss_dssp THHHHEEEEEEEEE
T ss_pred hhhheeCCCCEEEE
Confidence 99999999999986
No 101
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.68 E-value=1.3e-15 Score=131.07 Aligned_cols=173 Identities=13% Similarity=0.071 Sum_probs=121.5
Q ss_pred HhHHHHHHHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhc------CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhh
Q 036563 41 KSQLVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKL------NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQ 114 (288)
Q Consensus 41 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l------~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~ 114 (288)
..+++..|++.+.+.....+-....+..+.|...+...+ ...++.+|||||||+|..+..++...
T Consensus 32 ~~~~~~~~~~~l~~~~~~~nl~~i~~~~~~~~~~~~ds~~~l~~~~~~~~~~vLDiG~G~G~~~i~la~~~--------- 102 (249)
T 3g89_A 32 HLEAFSRLYALLQEASGKVNLTALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPGLPLKIVR--------- 102 (249)
T ss_dssp GHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHGGGGSSCCCSSCEEEEETCTTTTTHHHHHHHC---------
T ss_pred HHHHHHHHHHHHHHHhcCCCCceECCHHHHhhceeeechhhhcccccCCCCEEEEEcCCCCHHHHHHHHHC---------
Confidence 345566677666665554433333344445544443322 23467899999999999999998876
Q ss_pred cccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCC---CCCeeEEEeccccccccCHHHHHH
Q 036563 115 DVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFE---DSTMDGYTIAFGIRNVTHIEKALA 191 (288)
Q Consensus 115 ~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~D~v~~~~~l~~~~~~~~~l~ 191 (288)
+..+|+++|+++.+++.++++....++. +++++.+|+++++.. .++||+|++..+ .+...+++
T Consensus 103 --------~~~~v~~vD~s~~~~~~a~~~~~~~~l~--~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~----~~~~~ll~ 168 (249)
T 3g89_A 103 --------PELELVLVDATRKKVAFVERAIEVLGLK--GARALWGRAEVLAREAGHREAYARAVARAV----APLCVLSE 168 (249)
T ss_dssp --------TTCEEEEEESCHHHHHHHHHHHHHHTCS--SEEEEECCHHHHTTSTTTTTCEEEEEEESS----CCHHHHHH
T ss_pred --------CCCEEEEEECCHHHHHHHHHHHHHhCCC--ceEEEECcHHHhhcccccCCCceEEEECCc----CCHHHHHH
Confidence 4689999999999999999999888874 699999999887542 468999998643 56788999
Q ss_pred HHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEE
Q 036563 192 EAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVE 271 (288)
Q Consensus 192 ~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 271 (288)
.+.++|+|||.+++.....+. . ...++.+.++..||.+.+
T Consensus 169 ~~~~~LkpgG~l~~~~g~~~~-~---------------------------------------e~~~~~~~l~~~G~~~~~ 208 (249)
T 3g89_A 169 LLLPFLEVGGAAVAMKGPRVE-E---------------------------------------ELAPLPPALERLGGRLGE 208 (249)
T ss_dssp HHGGGEEEEEEEEEEECSCCH-H---------------------------------------HHTTHHHHHHHHTEEEEE
T ss_pred HHHHHcCCCeEEEEEeCCCcH-H---------------------------------------HHHHHHHHHHHcCCeEEE
Confidence 999999999999874321110 0 123466788889999988
Q ss_pred EEEee
Q 036563 272 YENLV 276 (288)
Q Consensus 272 ~~~~~ 276 (288)
+..+.
T Consensus 209 ~~~~~ 213 (249)
T 3g89_A 209 VLALQ 213 (249)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 87664
No 102
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.68 E-value=1.6e-16 Score=139.03 Aligned_cols=104 Identities=13% Similarity=0.063 Sum_probs=91.3
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....++ ++.+..+|+
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g-------------------~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~d~ 176 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLG-------------------YDVTSWDHNENSIAFLNETKEKENL---NISTALYDI 176 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTT-------------------CEEEEEESCHHHHHHHHHHHHHTTC---CEEEEECCG
T ss_pred cCCCcEEEECCCCCHHHHHHHHCC-------------------CeEEEEECCHHHHHHHHHHHHHcCC---ceEEEEecc
Confidence 367899999999999999998873 7999999999999999999887753 799999999
Q ss_pred ccCCCCCCCeeEEEeccccccccC--HHHHHHHHHhhccCCcEEEEEec
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTH--IEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
...+. +++||+|+++.+++|+++ ...+++++.++|+|||.++++..
T Consensus 177 ~~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (286)
T 3m70_A 177 NAANI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAA 224 (286)
T ss_dssp GGCCC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ccccc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 88776 678999999999998854 56899999999999999877544
No 103
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.67 E-value=1e-15 Score=132.26 Aligned_cols=137 Identities=24% Similarity=0.309 Sum_probs=103.0
Q ss_pred HHHHHHhHhhHHHhhhhhhhhh-hhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccC
Q 036563 44 LVSNVFSSVAKNYDLMNDLMSG-GLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQ 122 (288)
Q Consensus 44 ~~~~~~~~~~~~y~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~ 122 (288)
.....|+.++..|+........ ...+...+.+...++ ++.+|||+|||+|.++..+++..
T Consensus 16 ~~~~~~~~~a~~Yd~~~~~~~~~~~~~~~~~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~----------------- 76 (260)
T 2avn_A 16 RSWEFYDRIARAYDSMYETPKWKLYHRLIGSFLEEYLK--NPCRVLDLGGGTGKWSLFLQERG----------------- 76 (260)
T ss_dssp CHHHHHHHHHHHHGGGGCSHHHHHHHHHHHHHHHHHCC--SCCEEEEETCTTCHHHHHHHTTT-----------------
T ss_pred hhcchhhHHHHHHHHhccccchhHHHHHHHHHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcC-----------------
Confidence 3456677777777765421111 111222333444443 67899999999999999888762
Q ss_pred CCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccc-cCHHHHHHHHHhhccCCc
Q 036563 123 EETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNV-THIEKALAEAYRVLKRGG 201 (288)
Q Consensus 123 ~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG 201 (288)
.+++++|+|+.+++.++++.. .+ +..+|+..+++++++||+|++..++.|+ +++..+|+++.++|+|||
T Consensus 77 --~~v~gvD~s~~~l~~a~~~~~------~~--~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG 146 (260)
T 2avn_A 77 --FEVVLVDPSKEMLEVAREKGV------KN--VVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDG 146 (260)
T ss_dssp --CEEEEEESCHHHHHHHHHHTC------SC--EEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEE
T ss_pred --CeEEEEeCCHHHHHHHHhhcC------CC--EEECcHHHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCe
Confidence 789999999999999988753 12 7889998888888899999998866555 789999999999999999
Q ss_pred EEEEEecc
Q 036563 202 RFLCLELS 209 (288)
Q Consensus 202 ~l~i~~~~ 209 (288)
.+++...+
T Consensus 147 ~l~~~~~~ 154 (260)
T 2avn_A 147 LLIATVDN 154 (260)
T ss_dssp EEEEEEEB
T ss_pred EEEEEeCC
Confidence 99986554
No 104
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.67 E-value=2.2e-16 Score=134.50 Aligned_cols=141 Identities=16% Similarity=0.249 Sum_probs=100.5
Q ss_pred HHHHhHhhHHHhhhhhhh-------hhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccc
Q 036563 46 SNVFSSVAKNYDLMNDLM-------SGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLE 118 (288)
Q Consensus 46 ~~~~~~~~~~y~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~ 118 (288)
...|+..+..|+..+... ...+...+.+.+...+ ..++.+|||+|||+|.++..+++..
T Consensus 17 ~~~~~~~~~~Yd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~vLDiGcGtG~~~~~l~~~~------------- 82 (236)
T 1zx0_A 17 SPAWGAAPAAYDAADTHLRILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAP------------- 82 (236)
T ss_dssp HHHHTTSCEEECTTSCEEEETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHHTSC-------------
T ss_pred chhhhcchhhcCCccchhhccchHHHHHHHHHHHHHHHhhc-CCCCCeEEEEeccCCHHHHHHHhcC-------------
Confidence 445666666676332210 0112222333344433 3467899999999999999986643
Q ss_pred cccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccC--CCCCCCeeEEEe-ccccc----cccCHHHHHH
Q 036563 119 DDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEAL--CFEDSTMDGYTI-AFGIR----NVTHIEKALA 191 (288)
Q Consensus 119 ~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~D~v~~-~~~l~----~~~~~~~~l~ 191 (288)
..+++++|+|+.|++.++++....+ .++.++.+|+.++ ++++++||+|++ .+.+. +..+...+++
T Consensus 83 -----~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~~l~ 154 (236)
T 1zx0_A 83 -----IDEHWIIECNDGVFQRLRDWAPRQT---HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKN 154 (236)
T ss_dssp -----EEEEEEEECCHHHHHHHHHHGGGCS---SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHH
T ss_pred -----CCeEEEEcCCHHHHHHHHHHHHhcC---CCeEEEecCHHHhhcccCCCceEEEEECCcccchhhhhhhhHHHHHH
Confidence 2589999999999999999887654 4799999999887 788889999999 55431 1223457899
Q ss_pred HHHhhccCCcEEEEEec
Q 036563 192 EAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 192 ~~~~~L~pgG~l~i~~~ 208 (288)
+++++|||||++++.+.
T Consensus 155 ~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 155 HAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp THHHHEEEEEEEEECCH
T ss_pred HHHHhcCCCeEEEEEec
Confidence 99999999999997654
No 105
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.67 E-value=1.3e-15 Score=135.19 Aligned_cols=170 Identities=14% Similarity=0.116 Sum_probs=114.4
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC-----CCCceEEE
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY-----PDKSLLWV 157 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-----~~~~v~~~ 157 (288)
++.+|||+|||+|..+..+++. +..+++++|+++.|++.++++....+. ...++.+.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~------------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 95 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG------------------RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFI 95 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT------------------TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEE
T ss_pred CCCEEEEECCCCcHHHHHHHhc------------------CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEE
Confidence 5679999999999999988875 247999999999999999998765310 01378999
Q ss_pred EcccccCC----CC--CCCeeEEEeccccccc-c---CHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccc
Q 036563 158 EGDAEALC----FE--DSTMDGYTIAFGIRNV-T---HIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSV 227 (288)
Q Consensus 158 ~~d~~~~~----~~--~~~~D~v~~~~~l~~~-~---~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
.+|+...+ ++ +++||+|++.+++|+. . +...+++++.++|+|||.+++..... .. +...+....
T Consensus 96 ~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~---~~---l~~~~~~~~ 169 (313)
T 3bgv_A 96 TADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS---FE---LIRRLEASE 169 (313)
T ss_dssp ECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH---HH---HHHHHTTSS
T ss_pred EecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh---HH---HHHHHHhhc
Confidence 99998875 43 3589999999999887 3 35689999999999999999765432 21 222211110
Q ss_pred ccccccc-----ccCC------CcchhhhH-HH---HhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 228 IPAIGEL-----VAGD------RGSYQYLV-ES---VRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 228 ~~~~~~~-----~~~~------~~~~~~~~-~~---~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
....+.. +... ...+.+.. .. .....+.+++.+++++.||+++...++.
T Consensus 170 ~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~f~ 233 (313)
T 3bgv_A 170 TESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFL 233 (313)
T ss_dssp SSEEECSSEEEEESCSSCCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEEHH
T ss_pred cCccCCeeEEEEeCCCCCCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecCHH
Confidence 0001100 0000 01111100 11 1224578899999999999999987654
No 106
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.66 E-value=1.4e-15 Score=134.45 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=83.3
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC----CceEEEE
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD----KSLLWVE 158 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~----~~v~~~~ 158 (288)
++.+|||||||+|..+..++... ..+|+|+|+|+.|++.|+++....+... .++.+..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~------------------~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~ 109 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE------------------IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQ 109 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT------------------CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEE
T ss_pred CCCeEEEEecCCcHhHHHHHhcC------------------CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhh
Confidence 46799999999998666555542 3789999999999999999876654210 0256777
Q ss_pred ccc------ccC--CCCCCCeeEEEeccccccc---cCHHHHHHHHHhhccCCcEEEEEec
Q 036563 159 GDA------EAL--CFEDSTMDGYTIAFGIRNV---THIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 159 ~d~------~~~--~~~~~~~D~v~~~~~l~~~---~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.|+ .++ ++++++||+|+|.+++|+. .+...+|++++++|||||++++...
T Consensus 110 ~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 110 ETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 777 322 2456789999999999865 3568899999999999999987554
No 107
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.66 E-value=4.9e-15 Score=125.33 Aligned_cols=136 Identities=14% Similarity=0.134 Sum_probs=104.9
Q ss_pred CCCCCeEEEecCC-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEc
Q 036563 81 PFPGMKHLDVAGG-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEG 159 (288)
Q Consensus 81 ~~~~~~vLDiG~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 159 (288)
..++.+|||+||| +|.++..+++.. ..+++++|+++.+++.++++....+. +++++.+
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~------------------~~~v~~vD~s~~~~~~a~~~~~~~~~---~v~~~~~ 111 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF------------------NCKVTATEVDEEFFEYARRNIERNNS---NVRLVKS 111 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH------------------CCEEEEEECCHHHHHHHHHHHHHTTC---CCEEEEC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc------------------CCEEEEEECCHHHHHHHHHHHHHhCC---CcEEEeC
Confidence 4567899999999 999999998874 27999999999999999999888764 6899999
Q ss_pred ccccC-CCCCCCeeEEEeccccccccC-------------------HHHHHHHHHhhccCCcEEEEEeccCCChHHHHHH
Q 036563 160 DAEAL-CFEDSTMDGYTIAFGIRNVTH-------------------IEKALAEAYRVLKRGGRFLCLELSHVDIPVFKEL 219 (288)
Q Consensus 160 d~~~~-~~~~~~~D~v~~~~~l~~~~~-------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~ 219 (288)
|+..+ ++++++||+|+++..+++..+ ...+++++.++|+|||.+++.....+
T Consensus 112 d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~-------- 183 (230)
T 3evz_A 112 NGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE-------- 183 (230)
T ss_dssp SSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH--------
T ss_pred CchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH--------
Confidence 97543 345678999999877654332 47789999999999999997532110
Q ss_pred HHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCC
Q 036563 220 YDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 278 (288)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~ 278 (288)
...+++.++++++||.+..+....+.
T Consensus 184 ---------------------------------~~~~~~~~~l~~~g~~~~~~~~~~g~ 209 (230)
T 3evz_A 184 ---------------------------------KLLNVIKERGIKLGYSVKDIKFKVGT 209 (230)
T ss_dssp ---------------------------------HHHHHHHHHHHHTTCEEEEEEECCCC
T ss_pred ---------------------------------hHHHHHHHHHHHcCCceEEEEecCCC
Confidence 02467788999999977666544443
No 108
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.66 E-value=1.2e-15 Score=123.70 Aligned_cols=130 Identities=12% Similarity=0.039 Sum_probs=105.2
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..+++. . +++++|+|+.|++. . +++.+..+|+
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~-------------------~-~v~gvD~s~~~~~~-------~----~~~~~~~~d~ 70 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKR-------------------N-TVVSTDLNIRALES-------H----RGGNLVRADL 70 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTT-------------------S-EEEEEESCHHHHHT-------C----SSSCEEECST
T ss_pred CCCCeEEEeccCccHHHHHHHhc-------------------C-cEEEEECCHHHHhc-------c----cCCeEEECCh
Confidence 45679999999999999988775 3 99999999999886 1 5789999999
Q ss_pred ccCCCCCCCeeEEEeccccccccCH---------HHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccccccc
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHI---------EKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIG 232 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~---------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
.+ ++++++||+|+++..+++.++. ..+++++.+.+ |||.+++.....
T Consensus 71 ~~-~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~---------------------- 126 (170)
T 3q87_B 71 LC-SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA---------------------- 126 (170)
T ss_dssp TT-TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG----------------------
T ss_pred hh-hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC----------------------
Confidence 77 4555789999999888765443 56888888888 999999765221
Q ss_pred ccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEee
Q 036563 233 ELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGL 286 (288)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~ 286 (288)
...+++.++++++||+.+.+.....+.-.++..+
T Consensus 127 --------------------~~~~~l~~~l~~~gf~~~~~~~~~~~~e~~~~~~ 160 (170)
T 3q87_B 127 --------------------NRPKEVLARLEERGYGTRILKVRKILGETVYIIK 160 (170)
T ss_dssp --------------------GCHHHHHHHHHHTTCEEEEEEEEECSSSEEEEEE
T ss_pred --------------------CCHHHHHHHHHHCCCcEEEEEeeccCCceEEEEE
Confidence 1467888999999999999988888777766654
No 109
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.66 E-value=1.4e-15 Score=128.99 Aligned_cols=104 Identities=18% Similarity=0.238 Sum_probs=85.9
Q ss_pred HhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 76 VSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 76 ~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
++.+...++.+|||+|||+|.++..+++.. +..+++++|+++.+++.++++.... +++.
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~-----------------~~~~v~gvD~s~~~~~~a~~~~~~~----~~v~ 125 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIA-----------------DKGIVYAIEYAPRIMRELLDACAER----ENII 125 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHT-----------------TTSEEEEEESCHHHHHHHHHHTTTC----TTEE
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHc-----------------CCcEEEEEECCHHHHHHHHHHhhcC----CCeE
Confidence 444555678899999999999999999986 2479999999999999998886554 5899
Q ss_pred EEEccccc----CCCCCCCeeEEEeccccccccCH---HHHHHHHHhhccCCcEEEEE
Q 036563 156 WVEGDAEA----LCFEDSTMDGYTIAFGIRNVTHI---EKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 156 ~~~~d~~~----~~~~~~~~D~v~~~~~l~~~~~~---~~~l~~~~~~L~pgG~l~i~ 206 (288)
++.+|+.. .++. ++||+|+ +++.++ ..+++++.++|+|||.+++.
T Consensus 126 ~~~~d~~~~~~~~~~~-~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 126 PILGDANKPQEYANIV-EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEECCTTCGGGGTTTS-CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCCCcccccccC-ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 99999987 5555 6899998 334444 77899999999999999975
No 110
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.66 E-value=5.1e-15 Score=129.39 Aligned_cols=107 Identities=16% Similarity=0.180 Sum_probs=90.9
Q ss_pred hhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEE
Q 036563 77 SKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLW 156 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~ 156 (288)
..+...++.+|||||||+|.++..++... ++++|+++|+++.|++.|+++....++ .++++
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~-----------------~ga~V~gIDis~~~l~~Ar~~~~~~gl--~~v~~ 176 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHV-----------------YGMRVNVVEIEPDIAELSRKVIEGLGV--DGVNV 176 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHT-----------------TCCEEEEEESSHHHHHHHHHHHHHHTC--CSEEE
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHc-----------------cCCEEEEEECCHHHHHHHHHHHHhcCC--CCeEE
Confidence 45677889999999999998775555443 358999999999999999999988777 58999
Q ss_pred EEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 157 VEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 157 ~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+.+|+.+++ +++||+|++... .++..++++++.++|||||++++.+
T Consensus 177 v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 177 ITGDETVID--GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp EESCGGGGG--GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EECchhhCC--CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 999998865 678999998654 4788999999999999999999865
No 111
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.65 E-value=3.6e-15 Score=121.85 Aligned_cols=116 Identities=22% Similarity=0.298 Sum_probs=95.2
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
......+...+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....+
T Consensus 19 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-------------------~~v~~~D~~~~~~~~a~~~~~~~~ 79 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-------------------RRVYAIDRNPEAISTTEMNLQRHG 79 (192)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-------------------SEEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-------------------CEEEEEECCHHHHHHHHHHHHHcC
Confidence 3444566677777788899999999999999888863 799999999999999999988776
Q ss_pred CCCCceEEEEcccccCCCCC-CCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 149 YPDKSLLWVEGDAEALCFED-STMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.. .++.+..+|+.. .++. ++||+|++..+++ +...+++++.++|+|||.+++...
T Consensus 80 ~~-~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 80 LG-DNVTLMEGDAPE-ALCKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp CC-TTEEEEESCHHH-HHTTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CC-cceEEEecCHHH-hcccCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEec
Confidence 64 579999999876 2222 4799999987765 468899999999999999997543
No 112
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.65 E-value=3e-15 Score=129.33 Aligned_cols=139 Identities=13% Similarity=0.125 Sum_probs=109.2
Q ss_pred HHhhcCCC-CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 75 LVSKLNPF-PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 75 ~~~~l~~~-~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
+...+... ++.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++...++. .+
T Consensus 40 l~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~------------------~~~v~gvDi~~~~~~~a~~n~~~~~~~-~~ 100 (259)
T 3lpm_A 40 LAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT------------------KAKIVGVEIQERLADMAKRSVAYNQLE-DQ 100 (259)
T ss_dssp HHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC------------------CCEEEEECCSHHHHHHHHHHHHHTTCT-TT
T ss_pred HHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc------------------CCcEEEEECCHHHHHHHHHHHHHCCCc-cc
Confidence 34455566 78899999999999999998875 249999999999999999999888876 67
Q ss_pred eEEEEcccccCC--CCCCCeeEEEeccccccc--------------------cCHHHHHHHHHhhccCCcEEEEEeccCC
Q 036563 154 LLWVEGDAEALC--FEDSTMDGYTIAFGIRNV--------------------THIEKALAEAYRVLKRGGRFLCLELSHV 211 (288)
Q Consensus 154 v~~~~~d~~~~~--~~~~~~D~v~~~~~l~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 211 (288)
++++.+|+.+.. ++.++||+|+++..+... .+...+++.+.++|+|||.++++.. +
T Consensus 101 v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~--~ 178 (259)
T 3lpm_A 101 IEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHR--P 178 (259)
T ss_dssp EEEECSCGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEEC--T
T ss_pred EEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEc--H
Confidence 999999998864 456789999998665433 1235689999999999999997421 0
Q ss_pred ChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 212 DIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
....++.+.+++.||....+..+
T Consensus 179 -----------------------------------------~~~~~~~~~l~~~~~~~~~~~~v 201 (259)
T 3lpm_A 179 -----------------------------------------ERLLDIIDIMRKYRLEPKRIQFV 201 (259)
T ss_dssp -----------------------------------------TTHHHHHHHHHHTTEEEEEEEEE
T ss_pred -----------------------------------------HHHHHHHHHHHHCCCceEEEEEe
Confidence 13456777888889888777655
No 113
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.65 E-value=1.1e-15 Score=127.53 Aligned_cols=116 Identities=18% Similarity=0.263 Sum_probs=95.5
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
+.+.+...+ .++.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++....
T Consensus 32 ~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~------------------~~~v~~~D~s~~~~~~a~~~~~~~--- 88 (215)
T 2pxx_A 32 FRALLEPEL--RPEDRILVLGCGNSALSYELFLGG------------------FPNVTSVDYSSVVVAAMQACYAHV--- 88 (215)
T ss_dssp HHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTT------------------CCCEEEEESCHHHHHHHHHHTTTC---
T ss_pred HHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcC------------------CCcEEEEeCCHHHHHHHHHhcccC---
Confidence 334444444 457799999999999999988874 138999999999999999887642
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEecccccccc---------------CHHHHHHHHHhhccCCcEEEEEeccC
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVT---------------HIEKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~---------------~~~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
+++.+..+|+..+++++++||+|++..+++++. +...+++++.++|+|||.+++.++..
T Consensus 89 -~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 89 -PQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp -TTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred -CCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 579999999988887778999999988876543 56789999999999999999887655
No 114
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.65 E-value=2.6e-15 Score=122.72 Aligned_cols=107 Identities=15% Similarity=0.212 Sum_probs=86.1
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..+++. + .+|+++|+|+.|++.++++....++ ++++++..+.
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~-~------------------~~v~~vD~s~~~l~~a~~~~~~~~~--~~v~~~~~~~ 79 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL-S------------------KKVYAFDVQEQALGKTSQRLSDLGI--ENTELILDGH 79 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT-S------------------SEEEEEESCHHHHHHHHHHHHHHTC--CCEEEEESCG
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-C------------------CEEEEEECCHHHHHHHHHHHHHcCC--CcEEEEeCcH
Confidence 46789999999999999999887 2 8999999999999999999988776 4899999887
Q ss_pred ccCC-CCCCCeeEEEeccc-ccc--------ccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 162 EALC-FEDSTMDGYTIAFG-IRN--------VTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 162 ~~~~-~~~~~~D~v~~~~~-l~~--------~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
..+. +.+++||+|+++.. +++ ..+...+++++.++|+|||.+++..+.
T Consensus 80 ~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 80 ENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp GGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred HHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 7653 44678999998743 221 123467899999999999999987654
No 115
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.64 E-value=5.5e-15 Score=123.91 Aligned_cols=106 Identities=20% Similarity=0.248 Sum_probs=89.6
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..+++.. +..+++++|+++.+++.++++....++ .++.++.+|+.
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~-----------------p~~~v~gvD~s~~~l~~a~~~~~~~~~--~~v~~~~~d~~ 101 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQN-----------------PDINYIGIDIQKSVLSYALDKVLEVGV--PNIKLLWVDGS 101 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHC-----------------TTSEEEEEESCHHHHHHHHHHHHHHCC--SSEEEEECCSS
T ss_pred CCCeEEEEccCcCHHHHHHHHHC-----------------CCCCEEEEEcCHHHHHHHHHHHHHcCC--CCEEEEeCCHH
Confidence 46789999999999999999986 468999999999999999999887776 48999999998
Q ss_pred cCC--CCCCCeeEEEecccccccc--------CHHHHHHHHHhhccCCcEEEEEe
Q 036563 163 ALC--FEDSTMDGYTIAFGIRNVT--------HIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 163 ~~~--~~~~~~D~v~~~~~l~~~~--------~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.++ +++++||+|++++...+.. ....+++++.++|+|||.+++..
T Consensus 102 ~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 102 DLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp CGGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred HHHhhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 765 6677899999987643322 12579999999999999998753
No 116
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.64 E-value=1.3e-15 Score=127.93 Aligned_cols=111 Identities=17% Similarity=0.197 Sum_probs=86.1
Q ss_pred HhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHh----hhcCCCC
Q 036563 76 VSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRA----LERGYPD 151 (288)
Q Consensus 76 ~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~----~~~~~~~ 151 (288)
+..+...++.+|||+|||+|.++..+++.. +..+++++|+|+.|++.+.+.. ...++
T Consensus 20 ~~~l~~~~~~~vLDiGcG~G~~~~~la~~~-----------------p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~-- 80 (218)
T 3mq2_A 20 FEQLRSQYDDVVLDVGTGDGKHPYKVARQN-----------------PSRLVVALDADKSRMEKISAKAAAKPAKGGL-- 80 (218)
T ss_dssp HHHHHTTSSEEEEEESCTTCHHHHHHHHHC-----------------TTEEEEEEESCGGGGHHHHHHHTSCGGGTCC--
T ss_pred HHHhhccCCCEEEEecCCCCHHHHHHHHHC-----------------CCCEEEEEECCHHHHHHHHHHHHHhhhhcCC--
Confidence 344445677899999999999999999986 4689999999999988643322 23333
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccc---c--ccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFG---I--RNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~---l--~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
+++.+..+|+.+++++++. |.+++... + ++++++..+++++.++|||||.+++.
T Consensus 81 ~~v~~~~~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 81 PNLLYLWATAERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp TTEEEEECCSTTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred CceEEEecchhhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 4899999999998877665 77664332 2 25667789999999999999999973
No 117
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.64 E-value=2.3e-15 Score=124.36 Aligned_cols=113 Identities=16% Similarity=0.218 Sum_probs=92.9
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
..++.+|||+|||+|.++..+++..+ +..+++++|+++.+++.+++++...++. +++.++.+|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~----------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d 82 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVG----------------ENGRVFGFDIQDKAIANTTKKLTDLNLI-DRVTLIKDG 82 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHC----------------TTCEEEEECSCHHHHHHHHHHHHHTTCG-GGEEEECSC
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhC----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-CCeEEEECC
Confidence 35678999999999999999999863 3579999999999999999999887664 589999999
Q ss_pred cccCC-CCCCCeeEEEeccccc---------cccCHHHHHHHHHhhccCCcEEEEEeccC
Q 036563 161 AEALC-FEDSTMDGYTIAFGIR---------NVTHIEKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 161 ~~~~~-~~~~~~D~v~~~~~l~---------~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
+..++ +.+++||+|+++..+. ...+...+++++.++|+|||.+++..+..
T Consensus 83 ~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 83 HQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp GGGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred HHHHhhhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 88775 5567899999987551 11134679999999999999999876543
No 118
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.64 E-value=3.8e-15 Score=128.03 Aligned_cols=113 Identities=18% Similarity=0.262 Sum_probs=96.5
Q ss_pred HHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 72 KDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 72 ~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
...+...+...++.+|||+|||+|.++..+++..+ +..+++++|+++.+++.+++++...+++
T Consensus 82 ~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~----------------~~~~v~~~D~~~~~~~~a~~~~~~~~~~- 144 (255)
T 3mb5_A 82 AALIVAYAGISPGDFIVEAGVGSGALTLFLANIVG----------------PEGRVVSYEIREDFAKLAWENIKWAGFD- 144 (255)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC----------------TTSEEEEECSCHHHHHHHHHHHHHHTCT-
T ss_pred HHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhC----------------CCeEEEEEecCHHHHHHHHHHHHHcCCC-
Confidence 34567777888889999999999999999999853 4689999999999999999999888775
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+++.+..+|+.+. +++++||+|+++ .+++..+++++.++|+|||.+++..
T Consensus 145 ~~v~~~~~d~~~~-~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 145 DRVTIKLKDIYEG-IEEENVDHVILD-----LPQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp TTEEEECSCGGGC-CCCCSEEEEEEC-----SSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEECchhhc-cCCCCcCEEEEC-----CCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 5699999999864 566789999973 4567789999999999999999754
No 119
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.64 E-value=2.6e-15 Score=134.95 Aligned_cols=117 Identities=15% Similarity=0.181 Sum_probs=98.4
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc
Q 036563 68 HRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER 147 (288)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 147 (288)
...+.+.+.+.+...++.+|||+|||+|.++..+++.. ..+++++|+++ |++.++++....
T Consensus 49 ~~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g------------------~~~v~gvD~s~-~~~~a~~~~~~~ 109 (340)
T 2fyt_A 49 TESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG------------------AKKVLGVDQSE-ILYQAMDIIRLN 109 (340)
T ss_dssp HHHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT------------------CSEEEEEESST-HHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC------------------CCEEEEEChHH-HHHHHHHHHHHc
Confidence 34555677776666778899999999999999888862 36999999996 999999998888
Q ss_pred CCCCCceEEEEcccccCCCCCCCeeEEEecc---ccccccCHHHHHHHHHhhccCCcEEE
Q 036563 148 GYPDKSLLWVEGDAEALCFEDSTMDGYTIAF---GIRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 148 ~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~---~l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
++. +++.++.+|+.++++++++||+|++.. .+.+..+...++.++.++|+|||.++
T Consensus 110 ~~~-~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 110 KLE-DTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp TCT-TTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CCC-CcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 775 689999999998888778999999876 35555667889999999999999987
No 120
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.64 E-value=2.3e-15 Score=136.53 Aligned_cols=157 Identities=11% Similarity=0.111 Sum_probs=116.8
Q ss_pred hhHHhHHHHHHHhHhhHHHhhhh------hhhhhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhh
Q 036563 38 AEEKSQLVSNVFSSVAKNYDLMN------DLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRR 111 (288)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~y~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~ 111 (288)
.+-...-+.++|+.....++.++ ..............++..+...++.+|||||||+|.++..++...+
T Consensus 122 ~~~~~~Il~~~Y~r~V~~~~~L~~Ye~Fs~~vYGEt~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g----- 196 (438)
T 3uwp_A 122 TGLLRHILQQVYNHSVTDPEKLNNYEPFSPEVYGETSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATN----- 196 (438)
T ss_dssp HHHHHHHHHHHHHHHCSCGGGSCCCSSSCGGGGGGTHHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHhhcCCCHHHhcCcccCCCcccCCCCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-----
Confidence 44556667777775544444332 2223344445556777888888999999999999999999988752
Q ss_pred hhhcccccccCCCceEEEEeCChhHHHHHHHHh-------hhcCCCCCceEEEEcccccCCCCC--CCeeEEEecccccc
Q 036563 112 ALQDVLEDDLQEETRIYVCDINPNMLNVGKKRA-------LERGYPDKSLLWVEGDAEALCFED--STMDGYTIAFGIRN 182 (288)
Q Consensus 112 ~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~-------~~~~~~~~~v~~~~~d~~~~~~~~--~~~D~v~~~~~l~~ 182 (288)
..+++|+|+++.+++.|++.. ...++...++.++++|+.++++.+ ..+|+|+++..+ +
T Consensus 197 ------------~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~-F 263 (438)
T 3uwp_A 197 ------------CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFA-F 263 (438)
T ss_dssp ------------CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTT-C
T ss_pred ------------CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCccEEEEcccc-c
Confidence 346999999999999988753 233432258999999998876543 469999998765 4
Q ss_pred ccCHHHHHHHHHhhccCCcEEEEEeccCCC
Q 036563 183 VTHIEKALAEAYRVLKRGGRFLCLELSHVD 212 (288)
Q Consensus 183 ~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 212 (288)
.++....|.++.+.|||||.|++.+...+.
T Consensus 264 ~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 264 GPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp CHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred CchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 567888899999999999999998776664
No 121
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.63 E-value=2.7e-15 Score=136.61 Aligned_cols=141 Identities=15% Similarity=0.176 Sum_probs=110.5
Q ss_pred HHHHHHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCC
Q 036563 44 LVSNVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQE 123 (288)
Q Consensus 44 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 123 (288)
....+|+..+..|+.............+.+.+.......++.+|||+|||+|.++..+++..
T Consensus 24 ~~~~yf~~ya~~~~~~~~l~d~~r~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g------------------ 85 (376)
T 3r0q_C 24 DYAQYFCTYSFLYHQKDMLSDRVRMDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAG------------------ 85 (376)
T ss_dssp ----CTTGGGCHHHHHHHHTCHHHHHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTT------------------
T ss_pred cHHHHHHHHHHhHHHHHHhcChHHHHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcC------------------
Confidence 34566777777776533333344455667777777777788999999999999999998873
Q ss_pred CceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccc---cCHHHHHHHHHhhccCC
Q 036563 124 ETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNV---THIEKALAEAYRVLKRG 200 (288)
Q Consensus 124 ~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~---~~~~~~l~~~~~~L~pg 200 (288)
..+|+++|++ .|++.++++....++. +++.++.+|+.+++++ ++||+|++....+.. .....+++.+.++|+||
T Consensus 86 ~~~V~gvD~s-~~~~~a~~~~~~~~~~-~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~Lkpg 162 (376)
T 3r0q_C 86 ARKVYAVEAT-KMADHARALVKANNLD-HIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPT 162 (376)
T ss_dssp CSEEEEEESS-TTHHHHHHHHHHTTCT-TTEEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEE
T ss_pred CCEEEEEccH-HHHHHHHHHHHHcCCC-CeEEEEECchhhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCC
Confidence 2599999999 9999999999888876 6799999999988766 789999997654444 45788999999999999
Q ss_pred cEEEE
Q 036563 201 GRFLC 205 (288)
Q Consensus 201 G~l~i 205 (288)
|.+++
T Consensus 163 G~li~ 167 (376)
T 3r0q_C 163 GVMYP 167 (376)
T ss_dssp EEEES
T ss_pred eEEEE
Confidence 99985
No 122
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.63 E-value=9.2e-16 Score=129.81 Aligned_cols=119 Identities=14% Similarity=0.147 Sum_probs=97.2
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++. +++.++.+|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~-------------------~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~ 100 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQA-------------------ARWAAYDFSPELLKLARANA-------PHADVYEWNG 100 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGS-------------------SEEEEEESCHHHHHHHHHHC-------TTSEEEECCS
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcC-------------------CEEEEEECCHHHHHHHHHhC-------CCceEEEcch
Confidence 457899999999999999888872 79999999999999998872 5799999999
Q ss_pred -ccCCCC-CCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCC
Q 036563 162 -EALCFE-DSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDR 239 (288)
Q Consensus 162 -~~~~~~-~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
..++++ +++||+|+++ .++..+++++.++|+|||.++...
T Consensus 101 ~~~~~~~~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~~-------------------------------- 142 (226)
T 3m33_A 101 KGELPAGLGAPFGLIVSR------RGPTSVILRLPELAAPDAHFLYVG-------------------------------- 142 (226)
T ss_dssp CSSCCTTCCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEEE--------------------------------
T ss_pred hhccCCcCCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEeC--------------------------------
Confidence 556777 7899999987 456778999999999999998110
Q ss_pred cchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 240 GSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
.+.+.+++.+.++++||.++.+...
T Consensus 143 -----------~~~~~~~~~~~l~~~Gf~~~~~~~~ 167 (226)
T 3m33_A 143 -----------PRLNVPEVPERLAAVGWDIVAEDHV 167 (226)
T ss_dssp -----------SSSCCTHHHHHHHHTTCEEEEEEEE
T ss_pred -----------CcCCHHHHHHHHHHCCCeEEEEEee
Confidence 0224567888999999988777644
No 123
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.62 E-value=2.5e-15 Score=127.31 Aligned_cols=154 Identities=18% Similarity=0.219 Sum_probs=100.7
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCC-hhHHHHH---HHHhhhcCCCCCceEEE
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDIN-PNMLNVG---KKRALERGYPDKSLLWV 157 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s-~~~~~~a---~~~~~~~~~~~~~v~~~ 157 (288)
.++.+|||||||+|.++..+++.. ++.+++|+|+| +.|++.| +++....++ +++.+.
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~-----------------~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~--~~v~~~ 83 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAIND-----------------QNTFYIGIDPVKENLFDISKKIIKKPSKGGL--SNVVFV 83 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTC-----------------TTEEEEEECSCCGGGHHHHHHHTSCGGGTCC--SSEEEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhC-----------------CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC--CCeEEE
Confidence 456799999999999999998764 46899999999 7777776 666666665 479999
Q ss_pred EcccccCCCC-CCCeeEEEecccccc-----ccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccc
Q 036563 158 EGDAEALCFE-DSTMDGYTIAFGIRN-----VTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAI 231 (288)
Q Consensus 158 ~~d~~~~~~~-~~~~D~v~~~~~l~~-----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
.+|+..++.. .+.+|.+.+++.... ..+...++++++++|||||.+++.............. .
T Consensus 84 ~~d~~~l~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~-----------~ 152 (225)
T 3p2e_A 84 IAAAESLPFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIK-----------K 152 (225)
T ss_dssp CCBTTBCCGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------------
T ss_pred EcCHHHhhhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhh-----------h
Confidence 9999887532 256777776654322 1234568999999999999999733222111000000 0
Q ss_pred cccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee
Q 036563 232 GELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV 276 (288)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~ 276 (288)
...... .. . +...+++..+++++||+++....+.
T Consensus 153 ~~~~~~-~~--~--------~~~~~el~~~l~~aGf~v~~~~~~~ 186 (225)
T 3p2e_A 153 RGLPLL-SK--A--------YFLSEQYKAELSNSGFRIDDVKELD 186 (225)
T ss_dssp -----C-CH--H--------HHHSHHHHHHHHHHTCEEEEEEEEC
T ss_pred cCCCCC-Ch--h--------hcchHHHHHHHHHcCCCeeeeeecC
Confidence 000000 00 0 1123458999999999998887654
No 124
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.62 E-value=5.5e-15 Score=124.11 Aligned_cols=106 Identities=13% Similarity=0.183 Sum_probs=88.5
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||||||+|.++..+++.. +...++++|+++.+++.++++....++ .++.++.+|+.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~-----------------p~~~v~giD~s~~~l~~a~~~~~~~~~--~nv~~~~~d~~ 98 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQN-----------------PDINYIGIELFKSVIVTAVQKVKDSEA--QNVKLLNIDAD 98 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHC-----------------TTSEEEEECSCHHHHHHHHHHHHHSCC--SSEEEECCCGG
T ss_pred CCceEEEEecCCCHHHHHHHHHC-----------------CCCCEEEEEechHHHHHHHHHHHHcCC--CCEEEEeCCHH
Confidence 46789999999999999999886 468999999999999999999887776 47999999998
Q ss_pred cCC--CCCCCeeEEEeccccccccC--------HHHHHHHHHhhccCCcEEEEEe
Q 036563 163 ALC--FEDSTMDGYTIAFGIRNVTH--------IEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 163 ~~~--~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.++ +++++||.|++++...+... ...+++++.++|+|||.+++..
T Consensus 99 ~l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 99 TLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp GHHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred HHHhhcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 764 66778999988765432221 3678999999999999999754
No 125
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.62 E-value=8e-15 Score=125.97 Aligned_cols=112 Identities=20% Similarity=0.292 Sum_probs=95.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc-CCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER-GYPD 151 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~ 151 (288)
..+...+...++.+|||+|||+|.++..+++..+ +..+++++|+++.+++.+++++... +.
T Consensus 86 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~----------------~~~~v~~~D~~~~~~~~a~~~~~~~~g~-- 147 (258)
T 2pwy_A 86 SAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVG----------------EKGLVESYEARPHHLAQAERNVRAFWQV-- 147 (258)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC----------------TTSEEEEEESCHHHHHHHHHHHHHHCCC--
T ss_pred HHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhC----------------CCCEEEEEeCCHHHHHHHHHHHHHhcCC--
Confidence 4566777778889999999999999999999853 4589999999999999999998766 52
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+++.+..+|+.+.++++++||+|+++ .+++..+++++.++|+|||.+++..
T Consensus 148 ~~v~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 148 ENVRFHLGKLEEAELEEAAYDGVALD-----LMEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp CCEEEEESCGGGCCCCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEEECchhhcCCCCCCcCEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 58999999998876777789999973 4567789999999999999999765
No 126
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.62 E-value=3.9e-15 Score=129.79 Aligned_cols=111 Identities=16% Similarity=0.195 Sum_probs=90.5
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc-CCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER-GYPD 151 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~~~ 151 (288)
+.+...+...++.+|||+|||+|.++..+++... +..+++++|+++.+++.++++.... +.
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~----------------~~~~v~~vD~s~~~~~~a~~~~~~~~g~-- 161 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALN----------------GKGTLTVVERDEDNLKKAMDNLSEFYDI-- 161 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHT----------------TSSEEEEECSCHHHHHHHHHHHHTTSCC--
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcC----------------CCCEEEEEECCHHHHHHHHHHHHhcCCC--
Confidence 3556677778889999999999999999998742 4589999999999999999998776 54
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+++.+..+|+.+ ++++++||+|++ +.+++..+++++.++|+|||.+++..
T Consensus 162 ~~v~~~~~d~~~-~~~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 162 GNVRTSRSDIAD-FISDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp TTEEEECSCTTT-CCCSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred CcEEEEECchhc-cCcCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 479999999877 455678999998 45677889999999999999999765
No 127
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.61 E-value=1.5e-14 Score=117.37 Aligned_cols=110 Identities=18% Similarity=0.176 Sum_probs=92.9
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
...+.+...+...++.+|||+|||+|.++..+++. ..+++++|+++.+++.++++....++
T Consensus 22 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-------------------~~~v~~vD~~~~~~~~a~~~~~~~~~ 82 (183)
T 2yxd_A 22 EIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKR-------------------CKFVYAIDYLDGAIEVTKQNLAKFNI 82 (183)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTT-------------------SSEEEEEECSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhc-------------------CCeEEEEeCCHHHHHHHHHHHHHcCC
Confidence 34455666777777889999999999999998882 38999999999999999999988776
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+++.+..+|+.+ ++++++||+|++..+ .+...+++++.++ |||.+++..
T Consensus 83 --~~~~~~~~d~~~-~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 83 --KNCQIIKGRAED-VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp --CSEEEEESCHHH-HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEE
T ss_pred --CcEEEEECCccc-cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEe
Confidence 379999999877 556678999999888 5678899999998 999999765
No 128
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.61 E-value=5.3e-15 Score=121.55 Aligned_cols=108 Identities=14% Similarity=0.128 Sum_probs=91.3
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..++... ..+++++|+++.+++.++++....++ ++++++.+|+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~------------------~~~v~~vD~~~~~~~~a~~~~~~~~~--~~v~~~~~d~ 102 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG------------------AASVLFVESDQRSAAVIARNIEALGL--SGATLRRGAV 102 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT------------------CSEEEEEECCHHHHHHHHHHHHHHTC--SCEEEEESCH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC------------------CCeEEEEECCHHHHHHHHHHHHHcCC--CceEEEEccH
Confidence 457899999999999999877752 36899999999999999999988776 4899999998
Q ss_pred ccCC--CCCCCeeEEEeccccccc-cCHHHHHHHHHh--hccCCcEEEEEecc
Q 036563 162 EALC--FEDSTMDGYTIAFGIRNV-THIEKALAEAYR--VLKRGGRFLCLELS 209 (288)
Q Consensus 162 ~~~~--~~~~~~D~v~~~~~l~~~-~~~~~~l~~~~~--~L~pgG~l~i~~~~ 209 (288)
.+.. +++++||+|+++..+++. .+...+++.+.+ +|+|||.+++....
T Consensus 103 ~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 103 AAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp HHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred HHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 8763 346789999999887765 567889999999 99999999975443
No 129
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.61 E-value=5.9e-15 Score=124.39 Aligned_cols=114 Identities=15% Similarity=0.165 Sum_probs=92.7
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|..+..+++.++ ++.+++++|+++.+++.+++++...++. ++++++.+|+
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~----------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~ 119 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQ----------------PGARLLTMEINPDCAAITQQMLNFAGLQ-DKVTILNGAS 119 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSC----------------TTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEESCH
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCC----------------CCCEEEEEeCChHHHHHHHHHHHHcCCC-CceEEEECCH
Confidence 4567999999999999999998753 3689999999999999999999888775 5799999998
Q ss_pred ccC-CC-C----CCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCCh
Q 036563 162 EAL-CF-E----DSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDI 213 (288)
Q Consensus 162 ~~~-~~-~----~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 213 (288)
.+. +. . .++||+|++....++..+...++..+ ++|+|||.+++.+...+..
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~~~~~ 176 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVIVPGT 176 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCCCCCC
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCCCcch
Confidence 552 22 2 26899999988777766666778877 9999999999766555443
No 130
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.61 E-value=4.8e-15 Score=133.69 Aligned_cols=115 Identities=12% Similarity=0.154 Sum_probs=95.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
.+.+.+.......++.+|||+|||+|.++..+++.. ..+++++|+| .|++.++++....++
T Consensus 53 ~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g------------------~~~v~gvD~s-~~l~~a~~~~~~~~~ 113 (349)
T 3q7e_A 53 TYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAG------------------ARKVIGIECS-SISDYAVKIVKANKL 113 (349)
T ss_dssp HHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTT------------------CSEEEEEECS-THHHHHHHHHHHTTC
T ss_pred HHHHHHHhccccCCCCEEEEEeccchHHHHHHHHCC------------------CCEEEEECcH-HHHHHHHHHHHHcCC
Confidence 344455444444567899999999999999998872 3699999999 599999999988887
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEeccc---cccccCHHHHHHHHHhhccCCcEEE
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFG---IRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
. +++.++.+|+.++++++++||+|++... +.+..+...++.++.++|+|||.++
T Consensus 114 ~-~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li 170 (349)
T 3q7e_A 114 D-HVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 170 (349)
T ss_dssp T-TTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred C-CcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEc
Confidence 6 6799999999998888889999999765 3444678899999999999999987
No 131
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.61 E-value=4.1e-15 Score=126.33 Aligned_cols=107 Identities=18% Similarity=0.186 Sum_probs=85.1
Q ss_pred hcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEE
Q 036563 78 KLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWV 157 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~ 157 (288)
.+...++.+|||+|||+|.++..+++..+ +..+++++|+++.+++.+.+..... .++.+.
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g----------------~~~~v~gvD~s~~~i~~~~~~a~~~----~~v~~~ 131 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVG----------------PDGLVYAVEFSHRSGRDLINLAKKR----TNIIPV 131 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHC----------------TTCEEEEECCCHHHHHHHHHHHHHC----TTEEEE
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhC----------------CCcEEEEEECCHHHHHHHHHHhhcc----CCeEEE
Confidence 44566788999999999999999999863 3579999999999888777766654 479999
Q ss_pred EcccccC---CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 158 EGDAEAL---CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 158 ~~d~~~~---~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
.+|+... ++.+++||+|++... .......++.++.++|+|||.+++.
T Consensus 132 ~~d~~~~~~~~~~~~~~D~V~~~~~--~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 132 IEDARHPHKYRMLIAMVDVIFADVA--QPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp CSCTTCGGGGGGGCCCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EcccCChhhhcccCCcEEEEEEcCC--CccHHHHHHHHHHHHcCCCeEEEEE
Confidence 9999873 445678999998655 2222355688999999999999973
No 132
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.60 E-value=5.5e-14 Score=119.31 Aligned_cols=111 Identities=16% Similarity=0.152 Sum_probs=83.7
Q ss_pred HHHHhhc---CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 73 DRLVSKL---NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 73 ~~~~~~l---~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
..+...+ ...++.+|||+|||+|.++..+++..+ +.++|+++|+++.|++...+.....
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~----------------~~G~V~avD~s~~~l~~l~~~a~~r-- 124 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIE----------------LNGKAYGVEFSPRVVRELLLVAQRR-- 124 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHT----------------TTSEEEEEECCHHHHHHHHHHHHHC--
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhC----------------CCCEEEEEECcHHHHHHHHHHhhhc--
Confidence 3444444 477899999999999999999999875 5689999999999876554444333
Q ss_pred CCCceEEEEcccccCC---CCCCCeeEEEeccccccccCHHHH-HHHHHhhccCCcEEEEE
Q 036563 150 PDKSLLWVEGDAEALC---FEDSTMDGYTIAFGIRNVTHIEKA-LAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~---~~~~~~D~v~~~~~l~~~~~~~~~-l~~~~~~L~pgG~l~i~ 206 (288)
.++.++.+|+.... ...++||+|+++... ++.... +..+.+.|||||.|++.
T Consensus 125 --~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 125 --PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp --TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred --CCeEEEEcccccchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEE
Confidence 58999999987642 224589999998654 444444 45666699999999975
No 133
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.60 E-value=3.9e-15 Score=128.58 Aligned_cols=136 Identities=12% Similarity=0.034 Sum_probs=96.7
Q ss_pred HHHhHhhHHHhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCce
Q 036563 47 NVFSSVAKNYDLMNDLMSGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETR 126 (288)
Q Consensus 47 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (288)
+.|+..+..|........ ...+.+.++..+...++.+|||+|||+|.++..+++.. .+
T Consensus 12 ~~wd~~a~~f~~~~~~~~---~~~~~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g-------------------~~ 69 (261)
T 3iv6_A 12 EAWELIGNQFWTIGRVAA---RPSDRENDIFLENIVPGSTVAVIGASTRFLIEKALERG-------------------AS 69 (261)
T ss_dssp HHHHTTTTHHHHTSCGGG---SCCHHHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTT-------------------CE
T ss_pred hHHHHHHHHHHHHhhccc---cHHHHHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcC-------------------CE
Confidence 456666666654322111 02345667778888888999999999999999998863 79
Q ss_pred EEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEecccccccc--CHHHHHHHHHhhccCCcEEE
Q 036563 127 IYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVT--HIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 127 v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~ 204 (288)
|+++|+|+.|++.++++..... ....+...+.......+++||+|+++.+++|+. +...+++++.++| |||.++
T Consensus 70 V~gvD~S~~ml~~Ar~~~~~~~---v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~ 145 (261)
T 3iv6_A 70 VTVFDFSQRMCDDLAEALADRC---VTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVR 145 (261)
T ss_dssp EEEEESCHHHHHHHHHHTSSSC---CEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEE
T ss_pred EEEEECCHHHHHHHHHHHHhcc---ceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEE
Confidence 9999999999999998875431 122332222200111246899999999999875 4567999999999 999999
Q ss_pred EEec
Q 036563 205 CLEL 208 (288)
Q Consensus 205 i~~~ 208 (288)
+...
T Consensus 146 lS~~ 149 (261)
T 3iv6_A 146 ASVK 149 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 7543
No 134
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.59 E-value=9.6e-15 Score=125.57 Aligned_cols=156 Identities=10% Similarity=0.081 Sum_probs=104.8
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..++... +..+++++|+++.|++.++++....++. ++++++.+|+.
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-----------------~~~~v~gvD~s~~~~~~a~~~~~~~~~~-~~v~~~~~d~~ 126 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-----------------NGWYFLATEVDDMCFNYAKKNVEQNNLS-DLIKVVKVPQK 126 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-----------------HCCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEECCTT
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-----------------CCCeEEEEECCHHHHHHHHHHHHHcCCC-ccEEEEEcchh
Confidence 56799999999999999998876 3589999999999999999999887765 56999999976
Q ss_pred cC---CCC---CCCeeEEEecccccccc-C--------------HHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHH
Q 036563 163 AL---CFE---DSTMDGYTIAFGIRNVT-H--------------IEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYD 221 (288)
Q Consensus 163 ~~---~~~---~~~~D~v~~~~~l~~~~-~--------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~ 221 (288)
+. +++ +++||+|+++..+++.. + ...++.++.++|+|||.+.+.+. .......
T Consensus 127 ~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~------~~~~~~~ 200 (254)
T 2h00_A 127 TLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKR------IIHDSLQ 200 (254)
T ss_dssp CSSTTTSTTCCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHHHHH------HHHHHHH
T ss_pred hhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHH------HHHHHHh
Confidence 52 333 25899999997665432 1 12456788999999998875321 1111111
Q ss_pred HhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCC
Q 036563 222 YYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGG 278 (288)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~ 278 (288)
. +...+.+.... ......+++.++|+++||+.+++..+..|
T Consensus 201 ~-----l~~~g~~~~~~-----------~~~~~~~~~~~~l~~~Gf~~v~~~~~~~g 241 (254)
T 2h00_A 201 L-----KKRLRWYSCML-----------GKKCSLAPLKEELRIQGVPKVTYTEFCQG 241 (254)
T ss_dssp H-----GGGBSCEEEEE-----------SSTTSHHHHHHHHHHTTCSEEEEEEEEET
T ss_pred c-----ccceEEEEECC-----------CChhHHHHHHHHHHHcCCCceEEEEEecC
Confidence 1 11111111000 01123478899999999999998877655
No 135
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.59 E-value=1.5e-14 Score=126.03 Aligned_cols=112 Identities=15% Similarity=0.267 Sum_probs=94.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..++..+...++.+|||+|||+|.++..+++..+ +..+++++|+++.+++.++++....++. +
T Consensus 102 ~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~----------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~ 164 (277)
T 1o54_A 102 SFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVG----------------SSGKVFAYEKREEFAKLAESNLTKWGLI-E 164 (277)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTT----------------TTCEEEEECCCHHHHHHHHHHHHHTTCG-G
T ss_pred HHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhC----------------CCcEEEEEECCHHHHHHHHHHHHHcCCC-C
Confidence 4566677778889999999999999999998853 4589999999999999999998877664 5
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
++.+..+|+.+. +++++||+|+++ .+++..+++++.++|+|||.+++..
T Consensus 165 ~v~~~~~d~~~~-~~~~~~D~V~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 165 RVTIKVRDISEG-FDEKDVDALFLD-----VPDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp GEEEECCCGGGC-CSCCSEEEEEEC-----CSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred CEEEEECCHHHc-ccCCccCEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 799999998876 556789999983 4567789999999999999999765
No 136
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.59 E-value=3.9e-14 Score=122.09 Aligned_cols=133 Identities=23% Similarity=0.232 Sum_probs=105.1
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....++. +.+..+|+
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~g-------------------~~v~gvDi~~~~v~~a~~n~~~~~~~---v~~~~~d~ 176 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKLG-------------------GKALGVDIDPMVLPQAEANAKRNGVR---PRFLEGSL 176 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-------------------CEEEEEESCGGGHHHHHHHHHHTTCC---CEEEESCH
T ss_pred CCCCEEEEecCCCcHHHHHHHHhC-------------------CeEEEEECCHHHHHHHHHHHHHcCCc---EEEEECCh
Confidence 457899999999999999887753 49999999999999999998876542 88888887
Q ss_pred ccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCCcc
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDRGS 241 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (288)
... ++.++||+|+++...++ ...++.++.++|+|||.+++.+....
T Consensus 177 ~~~-~~~~~fD~Vv~n~~~~~---~~~~l~~~~~~LkpgG~lils~~~~~------------------------------ 222 (254)
T 2nxc_A 177 EAA-LPFGPFDLLVANLYAEL---HAALAPRYREALVPGGRALLTGILKD------------------------------ 222 (254)
T ss_dssp HHH-GGGCCEEEEEEECCHHH---HHHHHHHHHHHEEEEEEEEEEEEEGG------------------------------
T ss_pred hhc-CcCCCCCEEEECCcHHH---HHHHHHHHHHHcCCCCEEEEEeeccC------------------------------
Confidence 663 34568999999765443 57789999999999999997543221
Q ss_pred hhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEE
Q 036563 242 YQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIH 283 (288)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~ 283 (288)
+.+++.++++++||++++... .++.+.+.
T Consensus 223 ------------~~~~v~~~l~~~Gf~~~~~~~-~~~W~~l~ 251 (254)
T 2nxc_A 223 ------------RAPLVREAMAGAGFRPLEEAA-EGEWVLLA 251 (254)
T ss_dssp ------------GHHHHHHHHHHTTCEEEEEEE-ETTEEEEE
T ss_pred ------------CHHHHHHHHHHCCCEEEEEec-cCCeEEEE
Confidence 357888999999999988766 34555443
No 137
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.59 E-value=2.8e-14 Score=138.51 Aligned_cols=125 Identities=14% Similarity=0.078 Sum_probs=101.4
Q ss_pred hhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh
Q 036563 67 LHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE 146 (288)
Q Consensus 67 ~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~ 146 (288)
....+.+.+.+.+...++.+|||+|||+|.++..+++..+ +..+++++|+++.|++.|++++..
T Consensus 705 L~eqRle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~----------------p~a~VtGVDIS~emLe~AReRLa~ 768 (950)
T 3htx_A 705 LSKQRVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPT----------------SLQTIIGVDISPKGLARAAKMLHV 768 (950)
T ss_dssp HHHHHHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCC----------------CCCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCC----------------CCCeEEEEECCHHHHHHHHHHhhh
Confidence 3445555666666656788999999999999999988752 347999999999999999886653
Q ss_pred c------CCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHH--HHHHHHHhhccCCcEEEEEeccC
Q 036563 147 R------GYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIE--KALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 147 ~------~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~--~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
. +. +++.+.++|+..+++.+++||+|++..+++|+++.. .+++++.++|+|| .+++.....
T Consensus 769 ~lnAkr~gl--~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 769 KLNKEACNV--KSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp HTTTTCSSC--SEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred ccchhhcCC--CceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 2 22 489999999999988888999999999999998755 5899999999999 766655443
No 138
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.58 E-value=2.7e-14 Score=119.02 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=95.6
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
.....+.+.+...++.+|||+|||+|..+..+++.. .+++++|+++.+++.+++++...++
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~-------------------~~v~~vD~~~~~~~~a~~~~~~~~~ 124 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLV-------------------QHVCSVERIKGLQWQARRRLKNLDL 124 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-------------------SEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhC-------------------CEEEEEecCHHHHHHHHHHHHHcCC
Confidence 334566777777888999999999999999998873 7999999999999999999988776
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+ ++.+..+|+.+.....++||+|++..+++++.+ ++.+.|+|||++++...
T Consensus 125 ~--~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~ 175 (210)
T 3lbf_A 125 H--NVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVG 175 (210)
T ss_dssp C--SEEEEESCGGGCCGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEEC
T ss_pred C--ceEEEECCcccCCccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEc
Confidence 4 799999999876655678999999999998875 57899999999997543
No 139
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.58 E-value=1.8e-15 Score=128.93 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=89.1
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..+++.. .+++++|+++.+++.+++++...++. +++.++.+|+.
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-------------------~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~~d~~ 137 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-------------------MRVIAIDIDPVKIALARNNAEVYGIA-DKIEFICGDFL 137 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-------------------CEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCHH
T ss_pred CCCEEEECccccCHHHHHHHHcC-------------------CEEEEEECCHHHHHHHHHHHHHcCCC-cCeEEEECChH
Confidence 57899999999999999998863 79999999999999999999887764 48999999998
Q ss_pred cCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEE
Q 036563 163 ALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 163 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
.++ ++++||+|+++..+++..+....+.++.++|+|||.++
T Consensus 138 ~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i 178 (241)
T 3gdh_A 138 LLA-SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEI 178 (241)
T ss_dssp HHG-GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHH
T ss_pred Hhc-ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeH
Confidence 776 45689999999999988777767888999999999865
No 140
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.57 E-value=5.1e-14 Score=126.88 Aligned_cols=116 Identities=15% Similarity=0.194 Sum_probs=96.8
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
..+.+.+.+.+...++.+|||||||+|.++..+++.. ..+++++|+++ +++.++++....+
T Consensus 36 ~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g------------------~~~V~~vD~s~-~~~~a~~~~~~~~ 96 (348)
T 2y1w_A 36 GTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG------------------ARKIYAVEAST-MAQHAEVLVKSNN 96 (348)
T ss_dssp HHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTT------------------CSEEEEEECST-HHHHHHHHHHHTT
T ss_pred HHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCC------------------CCEEEEECCHH-HHHHHHHHHHHcC
Confidence 4456677777777778899999999999999888762 36999999996 8899999888877
Q ss_pred CCCCceEEEEcccccCCCCCCCeeEEEecccccccc--CHHHHHHHHHhhccCCcEEEE
Q 036563 149 YPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVT--HIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i 205 (288)
+. +++.++.+|+.+++++ ++||+|++...++++. +....+.++.++|+|||.+++
T Consensus 97 l~-~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 153 (348)
T 2y1w_A 97 LT-DRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 153 (348)
T ss_dssp CT-TTEEEEESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEES
T ss_pred CC-CcEEEEEcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEE
Confidence 75 6899999999887655 5799999998877664 456788899999999999984
No 141
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.57 E-value=1.5e-13 Score=120.09 Aligned_cols=137 Identities=12% Similarity=0.135 Sum_probs=107.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..+...+ .++.+|||+|||+|.++..+++... .+++++|+|+.+++.+++++...++. +
T Consensus 117 ~~l~~~~--~~~~~VLDlgcG~G~~~~~la~~~~------------------~~V~~vD~s~~~~~~a~~n~~~n~~~-~ 175 (278)
T 2frn_A 117 VRMAKVA--KPDELVVDMFAGIGHLSLPIAVYGK------------------AKVIAIEKDPYTFKFLVENIHLNKVE-D 175 (278)
T ss_dssp HHHHHHC--CTTCEEEETTCTTTTTHHHHHHHTC------------------CEEEEECCCHHHHHHHHHHHHHTTCT-T
T ss_pred HHHHHhC--CCCCEEEEecccCCHHHHHHHHhCC------------------CEEEEEECCHHHHHHHHHHHHHcCCC-c
Confidence 4444443 3578999999999999999998752 37999999999999999999888776 5
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccccccc
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIG 232 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
+++++.+|+.++.. +++||+|+++.. .+...++.++.++|+|||.+++.+++.....
T Consensus 176 ~v~~~~~D~~~~~~-~~~fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~------------------ 232 (278)
T 2frn_A 176 RMSAYNMDNRDFPG-ENIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM------------------ 232 (278)
T ss_dssp TEEEECSCTTTCCC-CSCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT------------------
T ss_pred eEEEEECCHHHhcc-cCCccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeeccccc------------------
Confidence 69999999988765 678999998654 3446789999999999999998765431000
Q ss_pred ccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEE
Q 036563 233 ELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVE 271 (288)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 271 (288)
.-...+.+.+.++++||+...
T Consensus 233 ------------------~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 233 ------------------PREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp ------------------TTTTHHHHHHHHHHTTCEEEE
T ss_pred ------------------cccHHHHHHHHHHHcCCeeEE
Confidence 001356788999999998766
No 142
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=6.1e-14 Score=121.30 Aligned_cols=114 Identities=12% Similarity=0.204 Sum_probs=92.2
Q ss_pred HHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh---cCCCC
Q 036563 75 LVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE---RGYPD 151 (288)
Q Consensus 75 ~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~---~~~~~ 151 (288)
+...+...++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++.. .++.
T Consensus 28 L~~~~~~~~~~~VLDlG~G~G~~~l~la~~~-----------------~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~- 89 (260)
T 2ozv_A 28 LASLVADDRACRIADLGAGAGAAGMAVAARL-----------------EKAEVTLYERSQEMAEFARRSLELPDNAAFS- 89 (260)
T ss_dssp HHHTCCCCSCEEEEECCSSSSHHHHHHHHHC-----------------TTEEEEEEESSHHHHHHHHHHTTSGGGTTTG-
T ss_pred HHHHhcccCCCEEEEeCChHhHHHHHHHHhC-----------------CCCeEEEEECCHHHHHHHHHHHHhhhhCCCc-
Confidence 3445556667899999999999999999986 458999999999999999999877 6664
Q ss_pred CceEEEEcccccC-------CCCCCCeeEEEeccccccc------------------cCHHHHHHHHHhhccCCcEEEEE
Q 036563 152 KSLLWVEGDAEAL-------CFEDSTMDGYTIAFGIRNV------------------THIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 152 ~~v~~~~~d~~~~-------~~~~~~~D~v~~~~~l~~~------------------~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
+++.++.+|+.+. .+++++||+|+++..+... .+...+++.+.++|+|||.++++
T Consensus 90 ~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 169 (260)
T 2ozv_A 90 ARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLI 169 (260)
T ss_dssp GGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEE
Confidence 5799999999876 2456789999998554322 23678899999999999999874
No 143
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.57 E-value=2.1e-14 Score=117.02 Aligned_cols=114 Identities=9% Similarity=0.019 Sum_probs=92.2
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
+.+.+...++ ++.+|||+|||+|.++..++... |..+|+++|+|+.|++.+++++...+..
T Consensus 39 fY~~~~~~l~--~~~~VLDlGCG~GplAl~l~~~~-----------------p~a~~~A~Di~~~~leiar~~~~~~g~~ 99 (200)
T 3fzg_A 39 FYTYVFGNIK--HVSSILDFGCGFNPLALYQWNEN-----------------EKIIYHAYDIDRAEIAFLSSIIGKLKTT 99 (200)
T ss_dssp HHHHHHHHSC--CCSEEEEETCTTHHHHHHHHCSS-----------------CCCEEEEECSCHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHhhcC--CCCeEEEecCCCCHHHHHHHhcC-----------------CCCEEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 3345555563 46799999999999999998886 5689999999999999999999887764
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.++++ .|.... .+.++||+|++..++|++++.+..+.++.+.|+|||.++-.+
T Consensus 100 -~~v~~--~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 100 -IKYRF--LNKESD-VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp -SEEEE--ECCHHH-HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred -ccEEE--eccccc-CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeC
Confidence 35666 454433 355789999999999999777778889999999999998543
No 144
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.56 E-value=5e-14 Score=124.62 Aligned_cols=151 Identities=22% Similarity=0.186 Sum_probs=107.2
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh--cCCCCCceEEEEc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE--RGYPDKSLLWVEG 159 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~~~~~v~~~~~ 159 (288)
.++.+|||||||+|.++..+++.. +..+++++|+++.+++.+++.+.. .+...++++++.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-----------------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~ 156 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-----------------TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVG 156 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-----------------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-----------------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC
Confidence 456799999999999999998764 357999999999999999988742 1122268999999
Q ss_pred ccccCCC--CCCCeeEEEeccccccccCH----HHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccc
Q 036563 160 DAEALCF--EDSTMDGYTIAFGIRNVTHI----EKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGE 233 (288)
Q Consensus 160 d~~~~~~--~~~~~D~v~~~~~l~~~~~~----~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
|+..... ++++||+|++....+..+.. ..+++++.++|+|||.+++...+....
T Consensus 157 D~~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~-------------------- 216 (304)
T 3bwc_A 157 DGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWLD-------------------- 216 (304)
T ss_dssp CHHHHHHSSCTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTTC--------------------
T ss_pred cHHHHHHhccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCcccc--------------------
Confidence 9877643 46789999997765443322 678999999999999999753221000
Q ss_pred cccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee-----CCeeEEEEeee
Q 036563 234 LVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV-----GGVVAIHSGLK 287 (288)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~-----~~~~~~~~~~k 287 (288)
....+.+.+.|+++||..+...... .|...+..+.|
T Consensus 217 ------------------~~~~~~~~~~l~~~GF~~v~~~~~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 217 ------------------LELIEKMSRFIRETGFASVQYALMHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp ------------------HHHHHHHHHHHHHHTCSEEEEEECCCTTSTTSCCEEEEEES
T ss_pred ------------------hHHHHHHHHHHHhCCCCcEEEEEeecccccCcceEEEEEeC
Confidence 0024678889999999988776432 34445555543
No 145
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.56 E-value=1.1e-13 Score=116.83 Aligned_cols=147 Identities=13% Similarity=0.053 Sum_probs=113.6
Q ss_pred HHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 75 LVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 75 ~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+...++ ++.+|+|||||+|.++..+++.. +..+++++|+++.+++.|++++...++. +++
T Consensus 15 i~~~v~--~g~~VlDIGtGsG~l~i~la~~~-----------------~~~~V~AvDi~~~al~~A~~N~~~~gl~-~~I 74 (230)
T 3lec_A 15 VANYVP--KGARLLDVGSDHAYLPIFLLQMG-----------------YCDFAIAGEVVNGPYQSALKNVSEHGLT-SKI 74 (230)
T ss_dssp HHTTSC--TTEEEEEETCSTTHHHHHHHHTT-----------------CEEEEEEEESSHHHHHHHHHHHHHTTCT-TTE
T ss_pred HHHhCC--CCCEEEEECCchHHHHHHHHHhC-----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-CcE
Confidence 444443 46799999999999999999875 3578999999999999999999999886 689
Q ss_pred EEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccccccccc
Q 036563 155 LWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGEL 234 (288)
Q Consensus 155 ~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
.+..+|..+...+.++||+|++.+.-. .-...+|....+.|+++|+|++...
T Consensus 75 ~~~~gD~l~~~~~~~~~D~IviaGmGg--~lI~~IL~~~~~~l~~~~~lIlqp~-------------------------- 126 (230)
T 3lec_A 75 DVRLANGLSAFEEADNIDTITICGMGG--RLIADILNNDIDKLQHVKTLVLQPN-------------------------- 126 (230)
T ss_dssp EEEECSGGGGCCGGGCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEES--------------------------
T ss_pred EEEECchhhccccccccCEEEEeCCch--HHHHHHHHHHHHHhCcCCEEEEECC--------------------------
Confidence 999999877654444799988655432 2357789999999999999987431
Q ss_pred ccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEee--CCeeEEEEeee
Q 036563 235 VAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLV--GGVVAIHSGLK 287 (288)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~--~~~~~~~~~~k 287 (288)
...+.++++|.+.||.+++-.-.. +-++-+..+.+
T Consensus 127 ------------------~~~~~lr~~L~~~Gf~i~~E~lv~e~~~~Yeii~~~~ 163 (230)
T 3lec_A 127 ------------------NREDDLRKWLAANDFEIVAEDILTENDKRYEILVVKH 163 (230)
T ss_dssp ------------------SCHHHHHHHHHHTTEEEEEEEEEEC--CEEEEEEEEE
T ss_pred ------------------CChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEEe
Confidence 145788999999999988866432 34555555543
No 146
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.56 E-value=1e-13 Score=117.05 Aligned_cols=106 Identities=22% Similarity=0.180 Sum_probs=84.8
Q ss_pred hcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEE
Q 036563 78 KLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWV 157 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~ 157 (288)
.+...++.+|||+|||+|.++..+++..+ +..+++++|+++.+++.++++.... +++.++
T Consensus 68 ~~~~~~~~~vLDlG~G~G~~~~~la~~~~----------------~~~~v~~vD~s~~~~~~~~~~~~~~----~~v~~~ 127 (227)
T 1g8a_A 68 NFPIKPGKSVLYLGIASGTTASHVSDIVG----------------WEGKIFGIEFSPRVLRELVPIVEER----RNIVPI 127 (227)
T ss_dssp CCCCCTTCEEEEETTTSTTHHHHHHHHHC----------------TTSEEEEEESCHHHHHHHHHHHSSC----TTEEEE
T ss_pred hcCCCCCCEEEEEeccCCHHHHHHHHHhC----------------CCeEEEEEECCHHHHHHHHHHHhcc----CCCEEE
Confidence 34466788999999999999999998863 3579999999999999998887654 489999
Q ss_pred EcccccCC---CCCCCeeEEEeccccccccCH-HHHHHHHHhhccCCcEEEEE
Q 036563 158 EGDAEALC---FEDSTMDGYTIAFGIRNVTHI-EKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 158 ~~d~~~~~---~~~~~~D~v~~~~~l~~~~~~-~~~l~~~~~~L~pgG~l~i~ 206 (288)
.+|+.... ...++||+|++... .++. ..++.++.++|+|||.+++.
T Consensus 128 ~~d~~~~~~~~~~~~~~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 128 LGDATKPEEYRALVPKVDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ECCTTCGGGGTTTCCCEEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EccCCCcchhhcccCCceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 99987632 12358999998665 2333 34599999999999999976
No 147
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.56 E-value=5.3e-14 Score=125.06 Aligned_cols=120 Identities=18% Similarity=0.203 Sum_probs=95.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..+...+...++.+|||+|||+|..+..+++..+ +..+++++|+++.+++.+++++...++.
T Consensus 108 ~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~----------------~~~~v~avD~s~~~l~~a~~~~~~~g~~-- 169 (315)
T 1ixk_A 108 MYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMR----------------NDGVIYAFDVDENRLRETRLNLSRLGVL-- 169 (315)
T ss_dssp HHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTT----------------TCSEEEEECSCHHHHHHHHHHHHHHTCC--
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhC----------------CCCEEEEEcCCHHHHHHHHHHHHHhCCC--
Confidence 3445667778889999999999999999998863 3479999999999999999999888774
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccc------cccccCH----------------HHHHHHHHhhccCCcEEEEEeccC
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFG------IRNVTHI----------------EKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~------l~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
++.++.+|+..++...++||+|++... +++.++. ..+|+++.++|||||.+++...+.
T Consensus 170 ~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~ 249 (315)
T 1ixk_A 170 NVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSL 249 (315)
T ss_dssp SEEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred eEEEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCC
Confidence 799999999887544568999998543 3222221 478999999999999999876654
No 148
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.56 E-value=1.9e-14 Score=128.69 Aligned_cols=115 Identities=15% Similarity=0.245 Sum_probs=93.8
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
.+.+.+.+.+...++.+|||+|||+|.++..+++.. ..+++++|++ .|++.++++....++
T Consensus 25 ~y~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g------------------~~~v~~vD~s-~~~~~a~~~~~~~~~ 85 (328)
T 1g6q_1 25 SYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHG------------------AKHVIGVDMS-SIIEMAKELVELNGF 85 (328)
T ss_dssp HHHHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTC------------------CSEEEEEESS-THHHHHHHHHHHTTC
T ss_pred HHHHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCC------------------CCEEEEEChH-HHHHHHHHHHHHcCC
Confidence 344455444444567899999999999999888762 3689999999 599999999888877
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEeccc---cccccCHHHHHHHHHhhccCCcEEE
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFG---IRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~---l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
. +++.++.+|+.+++++.++||+|++... +.+...+..++.++.++|+|||.++
T Consensus 86 ~-~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 86 S-DKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp T-TTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred C-CCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEE
Confidence 6 6899999999988877778999998754 3444567889999999999999997
No 149
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.55 E-value=2e-14 Score=121.22 Aligned_cols=106 Identities=15% Similarity=0.088 Sum_probs=88.3
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||||||+|.++..+++.. +...++|+|+++.+++.++++....++. ++.++.+|+.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~-----------------p~~~v~giD~s~~~l~~a~~~~~~~~l~--nv~~~~~Da~ 94 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDR-----------------PEQDFLGIEVHSPGVGACLASAHEEGLS--NLRVMCHDAV 94 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHC-----------------TTSEEEEECSCHHHHHHHHHHHHHTTCS--SEEEECSCHH
T ss_pred CCCeEEEEeeeChHHHHHHHHHC-----------------CCCeEEEEEecHHHHHHHHHHHHHhCCC--cEEEEECCHH
Confidence 45689999999999999999886 4689999999999999999998887764 7999999988
Q ss_pred cC-C--CCCCCeeEEEeccccccccCH--------HHHHHHHHhhccCCcEEEEEe
Q 036563 163 AL-C--FEDSTMDGYTIAFGIRNVTHI--------EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 163 ~~-~--~~~~~~D~v~~~~~l~~~~~~--------~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.+ + +++++||.|++++...+.... ..+++++.++|||||.+++..
T Consensus 95 ~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 95 EVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp HHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 74 3 677899999998654333211 259999999999999999754
No 150
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.55 E-value=4.9e-14 Score=118.08 Aligned_cols=104 Identities=19% Similarity=0.159 Sum_probs=80.7
Q ss_pred cCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEE
Q 036563 79 LNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVE 158 (288)
Q Consensus 79 l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~ 158 (288)
+...++.+|||+|||+|..+..+++.. +..+|+++|+|+.|++.+.+..... .++.++.
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~-----------------~~~~V~gvD~s~~~l~~~~~~a~~~----~~v~~~~ 111 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIV-----------------DEGIIYAVEYSAKPFEKLLELVRER----NNIIPLL 111 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHT-----------------TTSEEEEECCCHHHHHHHHHHHHHC----SSEEEEC
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHc-----------------CCCEEEEEECCHHHHHHHHHHHhcC----CCeEEEE
Confidence 445678899999999999999998886 2478999999999887666555443 4788888
Q ss_pred cccccC----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 159 GDAEAL----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 159 ~d~~~~----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
+|+... ++. ++||+|+++.. +..+...++++++++|||||.+++.
T Consensus 112 ~d~~~~~~~~~~~-~~fD~V~~~~~--~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 112 FDASKPWKYSGIV-EKVDLIYQDIA--QKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp SCTTCGGGTTTTC-CCEEEEEECCC--STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCCCchhhcccc-cceeEEEEecc--ChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 888763 333 68999998732 2223445699999999999999975
No 151
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.54 E-value=2.2e-14 Score=119.27 Aligned_cols=107 Identities=13% Similarity=0.109 Sum_probs=86.7
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..++... ..+++++|+|+.|++.+++++...++..+++.++.+|+.
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~------------------~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~ 114 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQ------------------AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSL 114 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT------------------CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHH
T ss_pred CCCeEEEcCCccCHHHHHHHHcc------------------CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHH
Confidence 46799999999999999877663 268999999999999999999887652137999999987
Q ss_pred cCCC--CCCC-eeEEEeccccccccCHHHHHHHH--HhhccCCcEEEEEec
Q 036563 163 ALCF--EDST-MDGYTIAFGIRNVTHIEKALAEA--YRVLKRGGRFLCLEL 208 (288)
Q Consensus 163 ~~~~--~~~~-~D~v~~~~~l~~~~~~~~~l~~~--~~~L~pgG~l~i~~~ 208 (288)
+... ++++ ||+|+++..++ ..+...+++.+ .++|+|||.+++...
T Consensus 115 ~~~~~~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~ 164 (201)
T 2ift_A 115 DFLKQPQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIYVETE 164 (201)
T ss_dssp HHTTSCCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHHhhccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 6532 3568 99999988854 55677888888 678999999987543
No 152
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.54 E-value=1e-13 Score=120.66 Aligned_cols=114 Identities=18% Similarity=0.304 Sum_probs=95.9
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc-C-CC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER-G-YP 150 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~-~~ 150 (288)
..++..+...++.+|||+|||+|.++..+++..+ +..+++++|+++.+++.++++.... + +.
T Consensus 89 ~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~----------------~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~ 152 (280)
T 1i9g_A 89 AQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVG----------------PAGQVISYEQRADHAEHARRNVSGCYGQPP 152 (280)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC----------------TTSEEEEECSCHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhC----------------CCCEEEEEeCCHHHHHHHHHHHHHhcCCCC
Confidence 4566777778888999999999999999998753 4589999999999999999988765 3 22
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.++.+..+|+.+.++++++||+|+++ .+++..+++++.++|+|||.+++...
T Consensus 153 -~~v~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 153 -DNWRLVVSDLADSELPDGSVDRAVLD-----MLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp -TTEEEECSCGGGCCCCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred -CcEEEEECchHhcCCCCCceeEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 58999999998887767789999983 34677899999999999999998654
No 153
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.54 E-value=4.4e-14 Score=126.61 Aligned_cols=114 Identities=18% Similarity=0.319 Sum_probs=88.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC----
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG---- 148 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~---- 148 (288)
..++..+...++.+|||+|||+|.++..+++..+ +..+++++|+++.+++.++++....+
T Consensus 95 ~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g----------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ 158 (336)
T 2b25_A 95 NMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVG----------------SQGRVISFEVRKDHHDLAKKNYKHWRDSWK 158 (336)
T ss_dssp HHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHC----------------TTCEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhC----------------CCceEEEEeCCHHHHHHHHHHHHHhhcccc
Confidence 4566667777889999999999999999998864 45899999999999999999887532
Q ss_pred ------CCCCceEEEEcccccC--CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 149 ------YPDKSLLWVEGDAEAL--CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 149 ------~~~~~v~~~~~d~~~~--~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.. .++.+..+|+.+. ++++++||+|+++. .++..+++++.++|+|||.+++...
T Consensus 159 ln~~~~~~-~~v~~~~~d~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 159 LSHVEEWP-DNVDFIHKDISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp TTCSSCCC-CCEEEEESCTTCCC-------EEEEEECS-----SSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred cccccccC-CceEEEECChHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 11 4799999999876 45566899999854 3444589999999999999997554
No 154
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.54 E-value=4e-14 Score=122.40 Aligned_cols=163 Identities=19% Similarity=0.207 Sum_probs=111.7
Q ss_pred HHHHHHHHhhcCC-CCCCeEEEecCCc--cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhh
Q 036563 69 RLWKDRLVSKLNP-FPGMKHLDVAGGT--GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRAL 145 (288)
Q Consensus 69 ~~~~~~~~~~l~~-~~~~~vLDiG~G~--G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~ 145 (288)
+.|....++.+.. ....+|||||||+ +..+..+++... +.++|+++|.|+.|+..+++++.
T Consensus 63 r~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~----------------P~arVv~VD~sp~mLa~Ar~~l~ 126 (277)
T 3giw_A 63 RDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVA----------------PESRVVYVDNDPIVLTLSQGLLA 126 (277)
T ss_dssp HHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHC----------------TTCEEEEEECCHHHHHTTHHHHC
T ss_pred HHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHC----------------CCCEEEEEeCChHHHHHHHHHhc
Confidence 4455555565542 2335899999997 434455555432 57899999999999999999886
Q ss_pred hcCCCCCceEEEEcccccCCC----C--CCCee-----EEEeccccccccC---HHHHHHHHHhhccCCcEEEEEeccCC
Q 036563 146 ERGYPDKSLLWVEGDAEALCF----E--DSTMD-----GYTIAFGIRNVTH---IEKALAEAYRVLKRGGRFLCLELSHV 211 (288)
Q Consensus 146 ~~~~~~~~v~~~~~d~~~~~~----~--~~~~D-----~v~~~~~l~~~~~---~~~~l~~~~~~L~pgG~l~i~~~~~~ 211 (288)
..+. .++.++++|+.+... + ...|| .|+++.+|||+++ +..+++++.+.|+|||+|++.+.+..
T Consensus 127 ~~~~--~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 127 STPE--GRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp CCSS--SEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred cCCC--CcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 5421 479999999987520 1 23455 6889999999987 56899999999999999999887765
Q ss_pred ChH-HHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEE
Q 036563 212 DIP-VFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVE 271 (288)
Q Consensus 212 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~ 271 (288)
..+ ....+...+...-.+ ..+.+.+++..+|. ||+.++
T Consensus 205 ~~p~~~~~~~~~~~~~g~p--------------------~~~rs~~ei~~~f~--Glelve 243 (277)
T 3giw_A 205 FAPQEVGRVAREYAARNMP--------------------MRLRTHAEAEEFFE--GLELVE 243 (277)
T ss_dssp TSHHHHHHHHHHHHHTTCC--------------------CCCCCHHHHHHTTT--TSEECT
T ss_pred CCHHHHHHHHHHHHhcCCC--------------------CccCCHHHHHHHhC--CCcccC
Confidence 332 223333322100000 12458899999994 998654
No 155
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.54 E-value=9.6e-14 Score=117.23 Aligned_cols=115 Identities=15% Similarity=0.200 Sum_probs=92.4
Q ss_pred HHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 72 KDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 72 ~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
...+....+..++.+|||+|||+|..+..+++..+ ++++++++|+++.+++.+++++...++..
T Consensus 45 l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~----------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~~ 108 (221)
T 3dr5_A 45 LTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLA----------------DNTTLTCIDPESEHQRQAKALFREAGYSP 108 (221)
T ss_dssp HHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSC----------------TTSEEEEECSCHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 34455555544456999999999999999999863 46899999999999999999998877642
Q ss_pred CceEEEEcccccC--CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 152 KSLLWVEGDAEAL--CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 152 ~~v~~~~~d~~~~--~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
++++++.+|+.+. .+++++||+|++.... .+...+++++.++|+|||.+++
T Consensus 109 ~~i~~~~gda~~~l~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 109 SRVRFLLSRPLDVMSRLANDSYQLVFGQVSP---MDLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp GGEEEECSCHHHHGGGSCTTCEEEEEECCCT---TTHHHHHHHHHHHEEEEEEEEE
T ss_pred CcEEEEEcCHHHHHHHhcCCCcCeEEEcCcH---HHHHHHHHHHHHHcCCCcEEEE
Confidence 4799999998664 2336789999987543 3567789999999999999996
No 156
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.54 E-value=8.9e-14 Score=118.12 Aligned_cols=112 Identities=13% Similarity=0.134 Sum_probs=91.6
Q ss_pred HHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 74 RLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
.+...+...++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++...++. ++
T Consensus 62 ~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-----------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~ 123 (232)
T 3ntv_A 62 LIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-----------------DDIHVTTIERNETMIQYAKQNLATYHFE-NQ 123 (232)
T ss_dssp HHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-----------------TTCEEEEEECCHHHHHHHHHHHHHTTCT-TT
T ss_pred HHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-Cc
Confidence 33344444457899999999999999999854 4589999999999999999999888775 68
Q ss_pred eEEEEcccccC-C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 154 LLWVEGDAEAL-C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 154 v~~~~~d~~~~-~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
++++.+|+.+. + ..+++||+|++... ..+...+++.+.++|+|||.+++-
T Consensus 124 v~~~~~d~~~~~~~~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d 175 (232)
T 3ntv_A 124 VRIIEGNALEQFENVNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITD 175 (232)
T ss_dssp EEEEESCGGGCHHHHTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEEECCHHHHHHhhccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEe
Confidence 99999998764 3 33578999997654 345788999999999999999863
No 157
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.53 E-value=2.4e-13 Score=114.65 Aligned_cols=145 Identities=17% Similarity=0.115 Sum_probs=109.7
Q ss_pred HHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 75 LVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 75 ~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+...++ ++.+|+|||||+|.++..++... +..+++++|+++.+++.|++++...++. +++
T Consensus 9 l~~~v~--~g~~VlDIGtGsG~l~i~la~~~-----------------~~~~V~avDi~~~al~~A~~N~~~~gl~-~~i 68 (225)
T 3kr9_A 9 VASFVS--QGAILLDVGSDHAYLPIELVERG-----------------QIKSAIAGEVVEGPYQSAVKNVEAHGLK-EKI 68 (225)
T ss_dssp HHTTSC--TTEEEEEETCSTTHHHHHHHHTT-----------------SEEEEEEEESSHHHHHHHHHHHHHTTCT-TTE
T ss_pred HHHhCC--CCCEEEEeCCCcHHHHHHHHHhC-----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-ceE
Confidence 344443 46799999999999999999875 4579999999999999999999999886 689
Q ss_pred EEEEccccc-CCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccc
Q 036563 155 LWVEGDAEA-LCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGE 233 (288)
Q Consensus 155 ~~~~~d~~~-~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
++..+|... ++. .++||+|+....-. .-...+|..+...|+++|++++...
T Consensus 69 ~~~~~d~l~~l~~-~~~~D~IviaG~Gg--~~i~~Il~~~~~~L~~~~~lVlq~~------------------------- 120 (225)
T 3kr9_A 69 QVRLANGLAAFEE-TDQVSVITIAGMGG--RLIARILEEGLGKLANVERLILQPN------------------------- 120 (225)
T ss_dssp EEEECSGGGGCCG-GGCCCEEEEEEECH--HHHHHHHHHTGGGCTTCCEEEEEES-------------------------
T ss_pred EEEECchhhhccc-CcCCCEEEEcCCCh--HHHHHHHHHHHHHhCCCCEEEEECC-------------------------
Confidence 999999854 332 23699988755421 1257789999999999999986321
Q ss_pred cccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe--eCCeeEEEEee
Q 036563 234 LVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL--VGGVVAIHSGL 286 (288)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~--~~~~~~~~~~~ 286 (288)
...+.++++|.+.||.+++-.-. .+-++-+..+.
T Consensus 121 -------------------~~~~~vr~~L~~~Gf~i~~e~lv~e~~~~Yeii~~~ 156 (225)
T 3kr9_A 121 -------------------NREDDLRIWLQDHGFQIVAESILEEAGKFYEILVVE 156 (225)
T ss_dssp -------------------SCHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEEEE
T ss_pred -------------------CCHHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 13577889999999998886533 23345554443
No 158
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=1.7e-13 Score=114.63 Aligned_cols=114 Identities=20% Similarity=0.235 Sum_probs=93.9
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
....+.+.+...++.+|||+|||+|.++..+++..+ +..+++++|+++.+++.++++....+++
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~----------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~ 128 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVG----------------EDGLVVSIERIPELAEKAERTLRKLGYD 128 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC----------------TTSEEEEEESCHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhC----------------CCCEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 345666777777888999999999999999998863 3479999999999999999998877664
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
++.+..+|+.......++||+|++..+++++. +++.++|+|||.+++...
T Consensus 129 --~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~ 178 (215)
T 2yxe_A 129 --NVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVG 178 (215)
T ss_dssp --TEEEEESCGGGCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEES
T ss_pred --CeEEEECCcccCCCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEEC
Confidence 69999999854332356899999999999876 478999999999997643
No 159
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.53 E-value=2.7e-13 Score=123.23 Aligned_cols=152 Identities=16% Similarity=0.157 Sum_probs=116.5
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
+.....++... ..++.+|||+|||+|.++..++... +..+++++|+++.|++.|++++...+
T Consensus 204 ~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~-----------------~~~~v~g~Dis~~~l~~A~~n~~~~g 265 (373)
T 3tm4_A 204 ASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRR-----------------YSGEIIGIEKYRKHLIGAEMNALAAG 265 (373)
T ss_dssp HHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTT-----------------CCSCEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhC-----------------CCCeEEEEeCCHHHHHHHHHHHHHcC
Confidence 34445566666 6678899999999999999998875 23589999999999999999998887
Q ss_pred CCCCceEEEEcccccCCCCCCCeeEEEecccccccc-------C-HHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHH
Q 036563 149 YPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVT-------H-IEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELY 220 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~-------~-~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~ 220 (288)
+. +++++.++|+.+++.++++||+|+++..+.... + ...+++.+.++| +|.++++..
T Consensus 266 l~-~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~------------ 330 (373)
T 3tm4_A 266 VL-DKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT------------ 330 (373)
T ss_dssp CG-GGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES------------
T ss_pred CC-CceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC------------
Confidence 75 589999999999887778899999987754321 1 156788888888 455444321
Q ss_pred HHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEee
Q 036563 221 DYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENLVGGVVAIHSGL 286 (288)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~~ 286 (288)
+.+.+++.+++.||+......+..|........
T Consensus 331 ---------------------------------~~~~~~~~~~~~G~~~~~~~~~~nG~l~~~~~~ 363 (373)
T 3tm4_A 331 ---------------------------------EKKAIEEAIAENGFEIIHHRVIGHGGLMVHLYV 363 (373)
T ss_dssp ---------------------------------CHHHHHHHHHHTTEEEEEEEEEEETTEEEEEEE
T ss_pred ---------------------------------CHHHHHHHHHHcCCEEEEEEEEEcCCEEEEEEe
Confidence 456777899999999999888877765555443
No 160
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.53 E-value=2.2e-13 Score=116.05 Aligned_cols=147 Identities=12% Similarity=0.040 Sum_probs=111.5
Q ss_pred HHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 74 RLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
.+...++ ++.+|||||||+|.++..+++.. +..+++++|+++.+++.|++++...++. ++
T Consensus 14 ~i~~~v~--~g~~VlDIGtGsG~l~i~la~~~-----------------~~~~V~avDi~~~al~~A~~N~~~~gl~-~~ 73 (244)
T 3gnl_A 14 KVASYIT--KNERIADIGSDHAYLPCFAVKNQ-----------------TASFAIAGEVVDGPFQSAQKQVRSSGLT-EQ 73 (244)
T ss_dssp HHHTTCC--SSEEEEEETCSTTHHHHHHHHTT-----------------SEEEEEEEESSHHHHHHHHHHHHHTTCT-TT
T ss_pred HHHHhCC--CCCEEEEECCccHHHHHHHHHhC-----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-ce
Confidence 3444444 46799999999999999999875 3578999999999999999999998886 67
Q ss_pred eEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccc
Q 036563 154 LLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGE 233 (288)
Q Consensus 154 v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
+.+..+|..+...+.++||+|++...-. .-...+|....+.|+++++|++...
T Consensus 74 I~v~~gD~l~~~~~~~~~D~IviagmGg--~lI~~IL~~~~~~L~~~~~lIlq~~------------------------- 126 (244)
T 3gnl_A 74 IDVRKGNGLAVIEKKDAIDTIVIAGMGG--TLIRTILEEGAAKLAGVTKLILQPN------------------------- 126 (244)
T ss_dssp EEEEECSGGGGCCGGGCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEES-------------------------
T ss_pred EEEEecchhhccCccccccEEEEeCCch--HHHHHHHHHHHHHhCCCCEEEEEcC-------------------------
Confidence 9999999877654444699988754422 2256789999999999999997431
Q ss_pred cccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe--eCCeeEEEEee
Q 036563 234 LVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL--VGGVVAIHSGL 286 (288)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~--~~~~~~~~~~~ 286 (288)
...+.++++|.+.||.+++-.-. .+-++-+..+.
T Consensus 127 -------------------~~~~~lr~~L~~~Gf~i~~E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 127 -------------------IAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLA 162 (244)
T ss_dssp -------------------SCHHHHHHHHHHHTEEEEEEEEEEETTEEEEEEEEE
T ss_pred -------------------CChHHHHHHHHHCCCEEEEEEEEEECCEEEEEEEEE
Confidence 13578889999999998776533 23344444443
No 161
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.53 E-value=2.2e-13 Score=122.94 Aligned_cols=120 Identities=23% Similarity=0.273 Sum_probs=99.0
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
+.....++......++.+|||+|||+|.++..++...+ +..+++++|+++.+++.+++++...+
T Consensus 189 ~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~----------------~~~~v~g~Di~~~~i~~a~~n~~~~g 252 (354)
T 3tma_A 189 PVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLG----------------PTSPVYAGDLDEKRLGLAREAALASG 252 (354)
T ss_dssp HHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHC----------------TTSCEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhC----------------CCceEEEEECCHHHHHHHHHHHHHcC
Confidence 34556667777777888999999999999999999862 35899999999999999999999887
Q ss_pred CCCCceEEEEcccccCCCCCCCeeEEEeccccccccC--------HHHHHHHHHhhccCCcEEEEE
Q 036563 149 YPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTH--------IEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~ 206 (288)
+. ++++.++|+.+++.+...||+|+++..+..... ...+++++.++|+|||.+++.
T Consensus 253 ~~--~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 253 LS--WIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp CT--TCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred CC--ceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 74 899999999998766677999999877543211 267899999999999999975
No 162
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.53 E-value=3.6e-14 Score=115.11 Aligned_cols=117 Identities=12% Similarity=0.110 Sum_probs=91.2
Q ss_pred HHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 73 DRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 73 ~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
+.+...+. ..++.+|||+|||+|.++..+++.. ..+++++|+++.+++.+++++...++.
T Consensus 20 ~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~------------------~~~v~~vD~~~~~~~~a~~~~~~~~~~- 80 (177)
T 2esr_A 20 GAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG------------------MSAAVLVEKNRKAQAIIQDNIIMTKAE- 80 (177)
T ss_dssp HHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT------------------CCEEEEECCCHHHHHHHHHHHHTTTCG-
T ss_pred HHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC------------------CCEEEEEECCHHHHHHHHHHHHHcCCC-
Confidence 44555554 4567899999999999999888762 379999999999999999998877664
Q ss_pred CceEEEEcccccC-CCCCCCeeEEEeccccccccCHHHHHHHHH--hhccCCcEEEEEecc
Q 036563 152 KSLLWVEGDAEAL-CFEDSTMDGYTIAFGIRNVTHIEKALAEAY--RVLKRGGRFLCLELS 209 (288)
Q Consensus 152 ~~v~~~~~d~~~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~i~~~~ 209 (288)
+++.++.+|+.+. +...++||+|+++..++ .......++.+. ++|+|||.+++....
T Consensus 81 ~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 81 NRFTLLKMEAERAIDCLTGRFDLVFLDPPYA-KETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp GGEEEECSCHHHHHHHBCSCEEEEEECCSSH-HHHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred CceEEEECcHHHhHHhhcCCCCEEEECCCCC-cchHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 5799999998773 33345799999987653 234566777776 999999999975443
No 163
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.52 E-value=1.3e-13 Score=125.27 Aligned_cols=123 Identities=13% Similarity=0.120 Sum_probs=98.1
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
..+.+.+.+...++.+|||+|||+|.++..+++.. +..+++++|+++.+++.++++....++.
T Consensus 210 ~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-----------------p~~~V~gvD~s~~al~~Ar~n~~~ngl~ 272 (375)
T 4dcm_A 210 GARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-----------------PQAKVVFVDESPMAVASSRLNVETNMPE 272 (375)
T ss_dssp HHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-----------------TTCEEEEEESCHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-----------------CCCEEEEEECcHHHHHHHHHHHHHcCCC
Confidence 34567788877777899999999999999999986 4689999999999999999998877653
Q ss_pred C-CceEEEEcccccCCCCCCCeeEEEeccccccccC-----HHHHHHHHHhhccCCcEEEEEeccCC
Q 036563 151 D-KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTH-----IEKALAEAYRVLKRGGRFLCLELSHV 211 (288)
Q Consensus 151 ~-~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~-----~~~~l~~~~~~L~pgG~l~i~~~~~~ 211 (288)
+ .++++..+|+.+ ++++++||+|+++..+++... ...+++++.++|+|||.++++.....
T Consensus 273 ~~~~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~~~ 338 (375)
T 4dcm_A 273 ALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANRHL 338 (375)
T ss_dssp GGGGEEEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEETTS
T ss_pred cCceEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEECCc
Confidence 1 258889999876 456678999999999875321 34689999999999999998755443
No 164
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.52 E-value=4e-13 Score=115.29 Aligned_cols=108 Identities=12% Similarity=0.055 Sum_probs=89.1
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
..++.+|||||||+|..+..+++.++ +..+++++|+++.+++.+++++...++. +++++..+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~----------------~~~~v~~vD~s~~~~~~a~~~~~~~g~~-~~v~~~~~d 123 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELP----------------ADGQLLTLEADAHHAQVARENLQLAGVD-QRVTLREGP 123 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSC----------------TTCEEEEEECCHHHHHHHHHHHHHTTCT-TTEEEEESC
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcC
Confidence 34568999999999999999999863 3689999999999999999999888876 689999999
Q ss_pred cccC-CCC--CCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 161 AEAL-CFE--DSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 161 ~~~~-~~~--~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+.+. +.. .++||+|++... ..+...+++++.++|+|||.+++.+.
T Consensus 124 ~~~~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 124 ALQSLESLGECPAFDLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp HHHHHHTCCSCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred HHHHHHhcCCCCCeEEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 8663 322 348999998653 34567899999999999999987443
No 165
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.52 E-value=1.5e-13 Score=122.21 Aligned_cols=114 Identities=22% Similarity=0.283 Sum_probs=95.7
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
...+.+.+.+...++.+|||+|||+|.++..+++... ...+++++|+++.+++.++++....++
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~----------------~~~~v~gvD~s~~~~~~a~~~~~~~g~ 125 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVG----------------EKGLVVSVEYSRKICEIAKRNVERLGI 125 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHC----------------TTCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcC----------------CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3445667777778889999999999999999998862 236799999999999999999888776
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
. ++.+..+|+.+.....++||+|++..+++++. +++.+.|+|||.+++..
T Consensus 126 ~--~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 126 E--NVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp C--SEEEEESCGGGCCGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEB
T ss_pred C--CeEEEECChhhccccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEE
Confidence 4 69999999987544557899999999999876 56789999999999864
No 166
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.52 E-value=7.7e-14 Score=113.76 Aligned_cols=116 Identities=17% Similarity=0.156 Sum_probs=90.5
Q ss_pred HHHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 73 DRLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 73 ~~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
+.+...+. ..++.+|||+|||+|.++..+++. +..+++++|+++.+++.++++....++.
T Consensus 33 ~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~------------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~- 93 (187)
T 2fhp_A 33 ESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSR------------------GMDKSICIEKNFAALKVIKENIAITKEP- 93 (187)
T ss_dssp HHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHT------------------TCSEEEEEESCHHHHHHHHHHHHHHTCG-
T ss_pred HHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHc------------------CCCEEEEEECCHHHHHHHHHHHHHhCCC-
Confidence 34444443 246779999999999999988775 2479999999999999999998877654
Q ss_pred CceEEEEcccccCC----CCCCCeeEEEeccccccccCHHHHHHHH--HhhccCCcEEEEEec
Q 036563 152 KSLLWVEGDAEALC----FEDSTMDGYTIAFGIRNVTHIEKALAEA--YRVLKRGGRFLCLEL 208 (288)
Q Consensus 152 ~~v~~~~~d~~~~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~--~~~L~pgG~l~i~~~ 208 (288)
+++.++.+|+.+.. ..+++||+|+++..++ ..+....++.+ .++|+|||.+++...
T Consensus 94 ~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~ 155 (187)
T 2fhp_A 94 EKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETD 155 (187)
T ss_dssp GGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred cceEEEECcHHHHHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeC
Confidence 57999999987632 2256899999988754 34566777777 889999999987543
No 167
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.52 E-value=1.9e-13 Score=124.44 Aligned_cols=116 Identities=14% Similarity=0.138 Sum_probs=95.9
Q ss_pred HHHHhhcC--CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 73 DRLVSKLN--PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 73 ~~~~~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
+.+...+. ..++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....++
T Consensus 221 ~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g-------------------~~V~gvDis~~al~~A~~n~~~~~~- 280 (381)
T 3dmg_A 221 EALQERLGPEGVRGRQVLDLGAGYGALTLPLARMG-------------------AEVVGVEDDLASVLSLQKGLEANAL- 280 (381)
T ss_dssp HHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTT-------------------CEEEEEESBHHHHHHHHHHHHHTTC-
T ss_pred HHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcC-------------------CEEEEEECCHHHHHHHHHHHHHcCC-
Confidence 44444432 3457799999999999999998873 7999999999999999999887764
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEecccccc-----ccCHHHHHHHHHhhccCCcEEEEEeccC
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRN-----VTHIEKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~-----~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
+++++.+|+.+...++++||+|+++..+++ ..+...+++++.++|+|||.++++....
T Consensus 281 --~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~~ 343 (381)
T 3dmg_A 281 --KAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNPF 343 (381)
T ss_dssp --CCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECTT
T ss_pred --CeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcCC
Confidence 489999999887666678999999999887 4456789999999999999999865444
No 168
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.52 E-value=1.8e-13 Score=126.07 Aligned_cols=123 Identities=12% Similarity=0.102 Sum_probs=95.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHH-------HH
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVG-------KK 142 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a-------~~ 142 (288)
.+...+++.+...++.+|||+|||+|..+..+++..+ ..+++|+|+++.+++.| ++
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-----------------~~~V~GVDis~~~l~~A~~Ml~~ar~ 291 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECG-----------------CALSFGCEIMDDASDLTILQYEELKK 291 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-----------------CSEEEEEECCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-----------------CCEEEEEeCCHHHHHHHHHhHHHHHH
Confidence 4445677777778889999999999999999999863 46899999999998888 77
Q ss_pred HhhhcCCCCCceEEEEcccccC--CC--CCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccC
Q 036563 143 RALERGYPDKSLLWVEGDAEAL--CF--EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 143 ~~~~~~~~~~~v~~~~~d~~~~--~~--~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
++...++.-.+++++.+|.... ++ ..++||+|+++..+ +.++....|+++.+.|+|||.+++.+...
T Consensus 292 ~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f~ 362 (433)
T 1u2z_A 292 RCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSLR 362 (433)
T ss_dssp HHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCSS
T ss_pred HHHHcCCCCCceEEEEcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeeccC
Confidence 7777663214899988754321 11 23579999998766 34677888999999999999999865433
No 169
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.51 E-value=9.1e-14 Score=125.91 Aligned_cols=116 Identities=17% Similarity=0.310 Sum_probs=93.0
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc
Q 036563 68 HRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER 147 (288)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 147 (288)
...+++.+.......++.+|||||||+|.++..+++.. ..+|+++|.|+ |++.|++.+..+
T Consensus 68 t~aY~~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aG------------------A~~V~ave~s~-~~~~a~~~~~~n 128 (376)
T 4hc4_A 68 TDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAG------------------ARRVYAVEASA-IWQQAREVVRFN 128 (376)
T ss_dssp HHHHHHHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTT------------------CSEEEEEECST-THHHHHHHHHHT
T ss_pred HHHHHHHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhC------------------CCEEEEEeChH-HHHHHHHHHHHc
Confidence 34555666554444467899999999999998877763 26899999986 889999999888
Q ss_pred CCCCCceEEEEcccccCCCCCCCeeEEEec---cccccccCHHHHHHHHHhhccCCcEEE
Q 036563 148 GYPDKSLLWVEGDAEALCFEDSTMDGYTIA---FGIRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 148 ~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~---~~l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
++. +++.++.+|++++.++ +++|+|++- ..+.+......++....++|+|||.++
T Consensus 129 ~~~-~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 129 GLE-DRVHVLPGPVETVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp TCT-TTEEEEESCTTTCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred CCC-ceEEEEeeeeeeecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 887 7899999999988766 589999983 334455567888999999999999987
No 170
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.51 E-value=8.8e-14 Score=115.71 Aligned_cols=105 Identities=11% Similarity=0.045 Sum_probs=86.1
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..++... ..+|+++|+++.|++.++++....++ +++.++.+|+.
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~------------------~~~V~~vD~s~~~l~~a~~~~~~~~~--~~v~~~~~D~~ 113 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY------------------AAGATLIEMDRAVSQQLIKNLATLKA--GNARVVNSNAM 113 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT------------------CSEEEEECSCHHHHHHHHHHHHHTTC--CSEEEECSCHH
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC------------------CCEEEEEECCHHHHHHHHHHHHHcCC--CcEEEEECCHH
Confidence 46799999999999999877763 25899999999999999999988766 48999999987
Q ss_pred c-CCCCCCCeeEEEeccccccccCHHHHHHHHHh--hccCCcEEEEEec
Q 036563 163 A-LCFEDSTMDGYTIAFGIRNVTHIEKALAEAYR--VLKRGGRFLCLEL 208 (288)
Q Consensus 163 ~-~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~--~L~pgG~l~i~~~ 208 (288)
+ ++...++||+|+++..++ ......+++.+.+ +|+|||.+++...
T Consensus 114 ~~~~~~~~~fD~V~~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 114 SFLAQKGTPHNIVFVDPPFR-RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp HHHSSCCCCEEEEEECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred HHHhhcCCCCCEEEECCCCC-CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 6 355567899999988754 4566778888865 5999999987543
No 171
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.51 E-value=3.2e-13 Score=114.13 Aligned_cols=111 Identities=20% Similarity=0.210 Sum_probs=92.1
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
...+.+.+.+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....+
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-------------------~~v~~vD~~~~~~~~a~~~~~~~~- 116 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-------------------DKVVSVEINEKMYNYASKLLSYYN- 116 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-------------------SEEEEEESCHHHHHHHHHHHTTCS-
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-------------------CEEEEEeCCHHHHHHHHHHHhhcC-
Confidence 444567777777788899999999999999998873 799999999999999999886552
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
++.+..+|+......+++||+|++..+++++. .++.++|+|||.+++....
T Consensus 117 ---~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 117 ---NIKLILGDGTLGYEEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp ---SEEEEESCGGGCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECS
T ss_pred ---CeEEEECCcccccccCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcC
Confidence 68999999877333456899999999998875 3688999999999986543
No 172
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.50 E-value=1.4e-13 Score=123.75 Aligned_cols=120 Identities=17% Similarity=0.228 Sum_probs=97.9
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
...+.+.+.+...++.+|||+|||+|.++..+++.. +..+++++|+++.+++.++++....+.
T Consensus 183 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~-----------------~~~~v~~vD~s~~~l~~a~~~~~~~~~ 245 (343)
T 2pjd_A 183 VGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS-----------------PKIRLTLCDVSAPAVEASRATLAANGV 245 (343)
T ss_dssp HHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHC-----------------TTCBCEEEESBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHC-----------------CCCEEEEEECCHHHHHHHHHHHHHhCC
Confidence 345667777765567799999999999999999885 357999999999999999999887664
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEecccccc-----ccCHHHHHHHHHhhccCCcEEEEEeccCC
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRN-----VTHIEKALAEAYRVLKRGGRFLCLELSHV 211 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~-----~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 211 (288)
..++..+|+.... +++||+|+++.++|+ ..+...+++++.++|+|||.++++.....
T Consensus 246 ---~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 307 (343)
T 2pjd_A 246 ---EGEVFASNVFSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANAFL 307 (343)
T ss_dssp ---CCEEEECSTTTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEETTS
T ss_pred ---CCEEEEccccccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcCCC
Confidence 3677888876543 568999999999875 23567899999999999999998765543
No 173
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.50 E-value=1e-13 Score=117.58 Aligned_cols=115 Identities=17% Similarity=0.160 Sum_probs=93.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..+...+...++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++...++. +
T Consensus 44 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~-----------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~ 105 (233)
T 2gpy_A 44 ESLLHLLKMAAPARILEIGTAIGYSAIRMAQAL-----------------PEATIVSIERDERRYEEAHKHVKALGLE-S 105 (233)
T ss_dssp HHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHC-----------------TTCEEEEECCCHHHHHHHHHHHHHTTCT-T
T ss_pred HHHHHHHhccCCCEEEEecCCCcHHHHHHHHHC-----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-C
Confidence 344444444567799999999999999999986 3589999999999999999999887765 5
Q ss_pred ceEEEEcccccC-CCC--CCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 153 SLLWVEGDAEAL-CFE--DSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 153 ~v~~~~~d~~~~-~~~--~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
++.+..+|+... +.. +++||+|++....+ +...+++.+.++|+|||.+++.+.
T Consensus 106 ~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 106 RIELLFGDALQLGEKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp TEEEECSCGGGSHHHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEETT
T ss_pred cEEEEECCHHHHHHhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEcC
Confidence 799999998774 322 46899999977653 678899999999999999997543
No 174
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.49 E-value=2.6e-13 Score=118.08 Aligned_cols=110 Identities=14% Similarity=0.207 Sum_probs=83.7
Q ss_pred CCCeEEEecCCccH----HHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh------------
Q 036563 83 PGMKHLDVAGGTGD----VAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE------------ 146 (288)
Q Consensus 83 ~~~~vLDiG~G~G~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~------------ 146 (288)
++.+|+|+|||||. ++..+++..+. .+.+.+|+++|+|+.|++.|++....
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~-------------~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~ 171 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGM-------------APGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQL 171 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCS-------------CTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHH
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhccc-------------CCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHH
Confidence 45799999999998 55556665420 00136999999999999999987410
Q ss_pred -----------cC-C--C---CCceEEEEcccccCCCC-CCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEE
Q 036563 147 -----------RG-Y--P---DKSLLWVEGDAEALCFE-DSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 147 -----------~~-~--~---~~~v~~~~~d~~~~~~~-~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i 205 (288)
.+ + . ..++.|.+.|+.+.+++ .++||+|+|.++++++++. .++++++++.|+|||++++
T Consensus 172 ~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 172 QRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp HHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 00 0 0 02689999998876554 5689999999999998755 7899999999999999986
No 175
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.49 E-value=5.1e-13 Score=116.76 Aligned_cols=116 Identities=14% Similarity=0.027 Sum_probs=86.1
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeC-ChhHHHHHHHHh-----hh
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDI-NPNMLNVGKKRA-----LE 146 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~-s~~~~~~a~~~~-----~~ 146 (288)
+.+.......++.+|||+|||+|.++..++... ..+|+++|+ ++.+++.++++. ..
T Consensus 69 ~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~------------------~~~v~~~D~s~~~~~~~a~~n~~~N~~~~ 130 (281)
T 3bzb_A 69 DTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG------------------ADQVVATDYPDPEILNSLESNIREHTANS 130 (281)
T ss_dssp HHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT------------------CSEEEEEECSCHHHHHHHHHHHHTTCC--
T ss_pred HHHHhcchhcCCCeEEEecccccHHHHHHHHcC------------------CCEEEEEeCCCHHHHHHHHHHHHHhhhhh
Confidence 344444434567799999999999999887752 258999999 899999999988 33
Q ss_pred cCCC---CCceEEEEcccccCC--C----CCCCeeEEEeccccccccCHHHHHHHHHhhcc---C--CcEEEEE
Q 036563 147 RGYP---DKSLLWVEGDAEALC--F----EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLK---R--GGRFLCL 206 (288)
Q Consensus 147 ~~~~---~~~v~~~~~d~~~~~--~----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~---p--gG~l~i~ 206 (288)
.++. .+++.+...|..+.. + +.++||+|++..++++.++...+++.+.++|+ | ||.++++
T Consensus 131 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 131 CSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp --------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred cccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 3321 025777766544321 1 35689999999999998899999999999999 9 9988764
No 176
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.49 E-value=1.7e-13 Score=116.81 Aligned_cols=107 Identities=18% Similarity=0.228 Sum_probs=83.7
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh------cCCCCCceE
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE------RGYPDKSLL 155 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~------~~~~~~~v~ 155 (288)
.++.+|||||||+|.++..+++.. +...++|+|+++.|++.|++++.. .+. .++.
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~-----------------p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~--~nv~ 105 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLF-----------------PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGF--QNIA 105 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGS-----------------TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC--TTEE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHC-----------------CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC--CeEE
Confidence 345689999999999999998876 468999999999999999887653 233 5899
Q ss_pred EEEccccc-CC--CCCCCeeEEEeccccccccC--------HHHHHHHHHhhccCCcEEEEEe
Q 036563 156 WVEGDAEA-LC--FEDSTMDGYTIAFGIRNVTH--------IEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 156 ~~~~d~~~-~~--~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
++.+|+.. ++ +++++||.|++.+...+... ...+++++.++|+|||.|++..
T Consensus 106 ~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 106 CLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp EEECCTTTCHHHHCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 99999986 44 67789999987654332211 1468999999999999999754
No 177
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.49 E-value=1.8e-13 Score=110.92 Aligned_cols=90 Identities=14% Similarity=0.060 Sum_probs=77.4
Q ss_pred hcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEE
Q 036563 78 KLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWV 157 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~ 157 (288)
.+...++.+|||+|||+ . . +|+|+.|++.++++.. .++.+.
T Consensus 7 ~~g~~~g~~vL~~~~g~----------v-------------------~----vD~s~~ml~~a~~~~~------~~~~~~ 47 (176)
T 2ld4_A 7 DFGISAGQFVAVVWDKS----------S-------------------P----VEALKGLVDKLQALTG------NEGRVS 47 (176)
T ss_dssp TTTCCTTSEEEEEECTT----------S-------------------C----HHHHHHHHHHHHHHTT------TTSEEE
T ss_pred ccCCCCCCEEEEecCCc----------e-------------------e----eeCCHHHHHHHHHhcc------cCcEEE
Confidence 34556789999999986 1 1 7889999999988753 248899
Q ss_pred EcccccCCC---CCCCeeEEEeccccccc-cCHHHHHHHHHhhccCCcEEEEE
Q 036563 158 EGDAEALCF---EDSTMDGYTIAFGIRNV-THIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 158 ~~d~~~~~~---~~~~~D~v~~~~~l~~~-~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
.+|+.++++ ++++||+|++..+++|+ ++...++++++++|||||++++.
T Consensus 48 ~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 48 VENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp EEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred EechhcCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEE
Confidence 999998876 77899999999999999 89999999999999999999974
No 178
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.49 E-value=3.3e-13 Score=108.38 Aligned_cols=108 Identities=21% Similarity=0.290 Sum_probs=88.0
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
..++.+|||+|||+|.++..+++..+ +..+++++|+++ +++. +++.+..+|
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~----------------~~~~v~~~D~~~-~~~~------------~~~~~~~~d 70 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIG----------------GKGRIIACDLLP-MDPI------------VGVDFLQGD 70 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHC----------------TTCEEEEEESSC-CCCC------------TTEEEEESC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhC----------------CCCeEEEEECcc-cccc------------CcEEEEEcc
Confidence 46678999999999999999998863 358999999999 6531 378999999
Q ss_pred cccCC--------CCCCCeeEEEeccccccccCH-----------HHHHHHHHhhccCCcEEEEEeccCCChHHHH
Q 036563 161 AEALC--------FEDSTMDGYTIAFGIRNVTHI-----------EKALAEAYRVLKRGGRFLCLELSHVDIPVFK 217 (288)
Q Consensus 161 ~~~~~--------~~~~~~D~v~~~~~l~~~~~~-----------~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~ 217 (288)
+.+.+ +++++||+|+++..+++..+. ..+++++.++|+|||.+++..........+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~ 146 (180)
T 1ej0_A 71 FRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEGFDEYL 146 (180)
T ss_dssp TTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTTHHHHH
T ss_pred cccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCcHHHHH
Confidence 88765 666789999999988877655 6889999999999999998777665544433
No 179
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.48 E-value=5e-13 Score=115.60 Aligned_cols=99 Identities=20% Similarity=0.268 Sum_probs=83.9
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..+++.. ++.+++++|+++.+++.++++. +++.+..+|+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-----------------~~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~~d~ 139 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-----------------PEITTFGLDVSKVAIKAAAKRY-------PQVTFCVASS 139 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-----------------TTSEEEEEESCHHHHHHHHHHC-------TTSEEEECCT
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-----------------CCCeEEEEeCCHHHHHHHHHhC-------CCcEEEEcch
Confidence 457799999999999999999875 3479999999999999998764 4688999999
Q ss_pred ccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCC
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHV 211 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 211 (288)
..+++++++||+|++..+.. .++++.++|+|||.+++......
T Consensus 140 ~~~~~~~~~fD~v~~~~~~~-------~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 140 HRLPFSDTSMDAIIRIYAPC-------KAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp TSCSBCTTCEEEEEEESCCC-------CHHHHHHHEEEEEEEEEEEECTT
T ss_pred hhCCCCCCceeEEEEeCChh-------hHHHHHHhcCCCcEEEEEEcCHH
Confidence 88888888999999876532 48899999999999998766543
No 180
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.48 E-value=9.8e-13 Score=110.83 Aligned_cols=114 Identities=18% Similarity=0.161 Sum_probs=90.7
Q ss_pred HHHhhcC--CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC--
Q 036563 74 RLVSKLN--PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY-- 149 (288)
Q Consensus 74 ~~~~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-- 149 (288)
.+.+.+. ..++.+|||+|||+|..+..+++..+ +..+++++|+++.+++.++++....+.
T Consensus 66 ~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~----------------~~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 129 (226)
T 1i1n_A 66 YALELLFDQLHEGAKALDVGSGSGILTACFARMVG----------------CTGKVIGIDHIKELVDDSVNNVRKDDPTL 129 (226)
T ss_dssp HHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHC----------------TTCEEEEEESCHHHHHHHHHHHHHHCTHH
T ss_pred HHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhC----------------CCcEEEEEeCCHHHHHHHHHHHHhhcccc
Confidence 4445554 56788999999999999999998863 346999999999999999998876542
Q ss_pred -CCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 150 -PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 150 -~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
...++.+..+|+.......++||+|++...++++ ++++.+.|+|||.+++....
T Consensus 130 ~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 130 LSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVV------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp HHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred cCCCcEEEEECCcccCcccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEec
Confidence 0147999999987665556689999999888765 35789999999999986543
No 181
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.47 E-value=1.3e-13 Score=118.24 Aligned_cols=118 Identities=16% Similarity=0.078 Sum_probs=88.2
Q ss_pred HHHhhcCCCCCCeEEEecCCccHHHHHHHHh--hhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc---C
Q 036563 74 RLVSKLNPFPGMKHLDVAGGTGDVAFRILDT--VNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER---G 148 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~---~ 148 (288)
.+.+.+...++.+|||+|||+|.++..+++. . +..+++++|+|+.+++.+++++... +
T Consensus 42 ~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~-----------------~~~~v~gvDis~~~l~~A~~~~~~~~~~~ 104 (250)
T 1o9g_A 42 RALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRR-----------------SLRQVIASDVDPAPLELAAKNLALLSPAG 104 (250)
T ss_dssp HHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGG-----------------GEEEEEEEESCHHHHHHHHHHHHTTSHHH
T ss_pred HHHHhcccCCCCeEEECCCCCCHHHHHHHHHhcc-----------------CCCeEEEEECCHHHHHHHHHHHHHhhhcc
Confidence 3344444445679999999999999999887 3 2478999999999999999876543 2
Q ss_pred CCCCc-------------------------eE-------------EEEcccccCCC-----CCCCeeEEEeccccccccC
Q 036563 149 YPDKS-------------------------LL-------------WVEGDAEALCF-----EDSTMDGYTIAFGIRNVTH 185 (288)
Q Consensus 149 ~~~~~-------------------------v~-------------~~~~d~~~~~~-----~~~~~D~v~~~~~l~~~~~ 185 (288)
+. .+ ++ +..+|+.+... ...+||+|+++..+....+
T Consensus 105 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~ 183 (250)
T 1o9g_A 105 LT-ARELERREQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTH 183 (250)
T ss_dssp HH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSS
T ss_pred cc-ccchhhhhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecccc
Confidence 21 11 56 89999876421 3348999999887654433
Q ss_pred ---------HHHHHHHHHhhccCCcEEEEEecc
Q 036563 186 ---------IEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 186 ---------~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
...+++++.++|+|||+++++...
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 184 WEGQVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp SSSCCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred ccccccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 357899999999999999985443
No 182
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.47 E-value=2.9e-13 Score=118.34 Aligned_cols=151 Identities=17% Similarity=0.189 Sum_probs=97.4
Q ss_pred HHhhcCC-CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 75 LVSKLNP-FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 75 ~~~~l~~-~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
+++.+.. .++.+|||+|||||.++..+++.. ..+|+++|+++.|+..+.+.- ++
T Consensus 76 ~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~g------------------a~~V~aVDvs~~mL~~a~r~~-------~r 130 (291)
T 3hp7_A 76 ALAVFNLSVEDMITIDIGASTGGFTDVMLQNG------------------AKLVYAVDVGTNQLVWKLRQD-------DR 130 (291)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHTT------------------CSEEEEECSSSSCSCHHHHTC-------TT
T ss_pred HHHhcCCCccccEEEecCCCccHHHHHHHhCC------------------CCEEEEEECCHHHHHHHHHhC-------cc
Confidence 3344443 356799999999999999888873 369999999999998854421 23
Q ss_pred eEEE-EcccccCC---CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccc
Q 036563 154 LLWV-EGDAEALC---FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIP 229 (288)
Q Consensus 154 v~~~-~~d~~~~~---~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
+... ..++..+. ++..+||+|++..++++ ...+|.+++++|+|||.++++. .|+...-. ....
T Consensus 131 v~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~s---l~~vL~e~~rvLkpGG~lv~lv--kPqfe~~~--------~~~~ 197 (291)
T 3hp7_A 131 VRSMEQYNFRYAEPVDFTEGLPSFASIDVSFIS---LNLILPALAKILVDGGQVVALV--KPQFEAGR--------EQIG 197 (291)
T ss_dssp EEEECSCCGGGCCGGGCTTCCCSEEEECCSSSC---GGGTHHHHHHHSCTTCEEEEEE--CGGGTSCG--------GGCC
T ss_pred cceecccCceecchhhCCCCCCCEEEEEeeHhh---HHHHHHHHHHHcCcCCEEEEEE--CcccccCh--------hhcC
Confidence 3322 33444332 33445999999888765 4778999999999999999752 22111000 0000
Q ss_pred cccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEE
Q 036563 230 AIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYEN 274 (288)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 274 (288)
..| .+ .++..+ ....+++.++++++||.+..+..
T Consensus 198 ~~G-~v-rd~~~~---------~~~~~~v~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 198 KNG-IV-RESSIH---------EKVLETVTAFAVDYGFSVKGLDF 231 (291)
T ss_dssp -CC-CC-CCHHHH---------HHHHHHHHHHHHHTTEEEEEEEE
T ss_pred CCC-cc-CCHHHH---------HHHHHHHHHHHHHCCCEEEEEEE
Confidence 000 10 011111 12578899999999999888764
No 183
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.47 E-value=2.2e-13 Score=114.64 Aligned_cols=107 Identities=15% Similarity=0.172 Sum_probs=88.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|..+..+++.++ +..+++++|+++.+++.+++++...++. ++++++.+|+
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~----------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~ 125 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALP----------------KDGTLITCDVDEKSTALAKEYWEKAGLS-DKIGLRLSPA 125 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCC----------------TTCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCH
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCC----------------CCCEEEEEeCCHHHHHHHHHHHHHCCCC-CceEEEeCCH
Confidence 3567999999999999999998863 3689999999999999999999888776 6799999998
Q ss_pred ccC-C-CCC----CCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 162 EAL-C-FED----STMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 162 ~~~-~-~~~----~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+. + ... ++||+|++... ..+...+++++.++|+|||.+++.+.
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHHHHHhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 553 2 111 68999997654 34577899999999999999997544
No 184
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.47 E-value=3.4e-13 Score=112.50 Aligned_cols=104 Identities=12% Similarity=0.163 Sum_probs=86.5
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|..+..+++..+ +..+++++|+++.+++.+++++...++. ++++++.+|+.
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~----------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d~~ 118 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAIS----------------ISSRVVMIDPDRDNVEHARRMLHDNGLI-DRVELQVGDPL 118 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSC----------------TTCEEEEEESCHHHHHHHHHHHHHHSGG-GGEEEEESCHH
T ss_pred CCCEEEEEcCCccHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHCCCC-ceEEEEEecHH
Confidence 457999999999999999998762 2589999999999999999998877664 57999999986
Q ss_pred cC-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 163 AL-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 163 ~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+. +..++ ||+|++... ..+...+++++.++|+|||.+++.+
T Consensus 119 ~~~~~~~~-fD~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 119 GIAAGQRD-IDILFMDCD---VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp HHHTTCCS-EEEEEEETT---TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred HHhccCCC-CCEEEEcCC---hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 54 44445 999998743 3567889999999999999998744
No 185
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.46 E-value=4.6e-14 Score=120.80 Aligned_cols=107 Identities=16% Similarity=0.087 Sum_probs=89.1
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|..+..+++..+ ++++|+++|+++.+++.+++++...++. ++++++.+|+
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~----------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~gda 121 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALP----------------DDGQVITCDINEGWTKHAHPYWREAKQE-HKIKLRLGPA 121 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSC----------------TTCEEEEEECCCSSCCCSHHHHHHTTCT-TTEEEEESCH
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCH
Confidence 3467999999999999999999863 3689999999999999999999888776 6899999998
Q ss_pred ccC-CCC-----CCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 162 EAL-CFE-----DSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 162 ~~~-~~~-----~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+. +.. .++||+|++... ..+...+++++.++|+|||.+++-+.
T Consensus 122 ~~~l~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~ 171 (242)
T 3r3h_A 122 LDTLHSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNI 171 (242)
T ss_dssp HHHHHHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred HHHHHHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECC
Confidence 664 211 468999998765 34567789999999999999997544
No 186
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.46 E-value=2.7e-13 Score=114.03 Aligned_cols=107 Identities=9% Similarity=0.009 Sum_probs=87.7
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
..++.+|||+|||+|..+..+++..+ ++.+++++|+++.+++.+++++...++. ++++++.+|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~----------------~~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~v~~~~~d 118 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLS----------------SGGRVVTLEASEKHADIARSNIERANLN-DRVEVRTGL 118 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCC----------------SSCEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESC
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcC
Confidence 34568999999999999999999863 3689999999999999999999888776 679999999
Q ss_pred cccC-C-CC---CCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 161 AEAL-C-FE---DSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 161 ~~~~-~-~~---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+.+. + +. .++||+|++.... .....+++++.++|+|||.+++.+
T Consensus 119 ~~~~~~~~~~~~~~~fD~v~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 119 ALDSLQQIENEKYEPFDFIFIDADK---QNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp HHHHHHHHHHTTCCCCSEEEECSCG---GGHHHHHHHHHHTCCTTCEEEEES
T ss_pred HHHHHHHHHhcCCCCcCEEEEcCCc---HHHHHHHHHHHHhcCCCcEEEEeC
Confidence 8653 1 11 2579999987652 356789999999999999888643
No 187
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.46 E-value=9e-13 Score=112.40 Aligned_cols=111 Identities=13% Similarity=0.108 Sum_probs=92.9
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..+...+...++.+|||+|||+|.++..+++. . .+++++|+++.+++.++++....++. +
T Consensus 81 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~------------------~~v~~vD~~~~~~~~a~~~~~~~~~~-~ 140 (248)
T 2yvl_A 81 FYIALKLNLNKEKRVLEFGTGSGALLAVLSEV-A------------------GEVWTFEAVEEFYKTAQKNLKKFNLG-K 140 (248)
T ss_dssp HHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-S------------------SEEEEECSCHHHHHHHHHHHHHTTCC-T
T ss_pred HHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-C------------------CEEEEEecCHHHHHHHHHHHHHcCCC-C
Confidence 35666777778889999999999999999887 3 79999999999999999998877664 5
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
++.+..+|+.+...+++.||+|+++ .+++..+++++.++|+|||.+++...
T Consensus 141 ~~~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 141 NVKFFNVDFKDAEVPEGIFHAAFVD-----VREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp TEEEECSCTTTSCCCTTCBSEEEEC-----SSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred cEEEEEcChhhcccCCCcccEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 7999999987754355689999973 34677889999999999999997553
No 188
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.46 E-value=1.6e-12 Score=121.00 Aligned_cols=121 Identities=21% Similarity=0.255 Sum_probs=97.1
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..+...+...++.+|||+|||+|..+..+++..+ ...+++++|+++.+++.+++++...++.
T Consensus 249 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~----------------~~~~v~a~D~s~~~l~~~~~~~~~~g~~-- 310 (450)
T 2yxl_A 249 AVASIVLDPKPGETVVDLAAAPGGKTTHLAELMK----------------NKGKIYAFDVDKMRMKRLKDFVKRMGIK-- 310 (450)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTT----------------TCSEEEEECSCHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcC----------------CCCEEEEEcCCHHHHHHHHHHHHHcCCC--
Confidence 3445567778889999999999999999999863 2379999999999999999999887764
Q ss_pred ceEEEEcccccCC--CCCCCeeEEEecc------ccccccCH----------------HHHHHHHHhhccCCcEEEEEec
Q 036563 153 SLLWVEGDAEALC--FEDSTMDGYTIAF------GIRNVTHI----------------EKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 153 ~v~~~~~d~~~~~--~~~~~~D~v~~~~------~l~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
++.+..+|+...+ +++++||+|++.. +++..++. ..+|+++.++|||||.+++.++
T Consensus 311 ~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 311 IVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp SEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred cEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 7999999998765 4446899999732 33333332 5689999999999999998877
Q ss_pred cCC
Q 036563 209 SHV 211 (288)
Q Consensus 209 ~~~ 211 (288)
+..
T Consensus 391 s~~ 393 (450)
T 2yxl_A 391 SIF 393 (450)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 189
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.45 E-value=1.7e-13 Score=123.98 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=83.5
Q ss_pred HHHhhcCCCCCCeEEEecCC------ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc
Q 036563 74 RLVSKLNPFPGMKHLDVAGG------TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER 147 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G------~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 147 (288)
.++..+.. ++.+||||||| +|..+..+++... +.++|+++|+++.|.. ..
T Consensus 208 ~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~f----------------P~a~V~GVDiSp~m~~-------~~ 263 (419)
T 3sso_A 208 RHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFF----------------PRGQIYGLDIMDKSHV-------DE 263 (419)
T ss_dssp HHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHC----------------TTCEEEEEESSCCGGG-------CB
T ss_pred HHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhC----------------CCCEEEEEECCHHHhh-------cC
Confidence 34444433 35799999999 7777777766542 4689999999999831 11
Q ss_pred CCCCCceEEEEcccccCCCC------CCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 148 GYPDKSLLWVEGDAEALCFE------DSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 148 ~~~~~~v~~~~~d~~~~~~~------~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
++++++++|+.++++. +++||+|++.. .++..+...+|+++.++|||||.+++.+..
T Consensus 264 ----~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 264 ----LRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp ----TTEEEEECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred ----CCcEEEEecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 6899999999887665 67899999875 466678889999999999999999987765
No 190
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.45 E-value=1.1e-12 Score=111.34 Aligned_cols=111 Identities=23% Similarity=0.308 Sum_probs=91.1
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
....+.+.+...++.+|||+|||+|.++..+++.. + .+++++|+++.+++.++++....++.
T Consensus 79 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~-----------------~-~~v~~vD~~~~~~~~a~~~~~~~~~~ 140 (235)
T 1jg1_A 79 MVAIMLEIANLKPGMNILEVGTGSGWNAALISEIV-----------------K-TDVYTIERIPELVEFAKRNLERAGVK 140 (235)
T ss_dssp HHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHH-----------------C-SCEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHh-----------------C-CEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 44566677777788899999999999999999886 3 78999999999999999998887764
Q ss_pred CCceEEEEcccccCCCCC-CCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 151 DKSLLWVEGDAEALCFED-STMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
++.+..+|+. .+++. ..||+|++..+++++.+ ++.+.|+|||.+++...
T Consensus 141 --~v~~~~~d~~-~~~~~~~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~ 190 (235)
T 1jg1_A 141 --NVHVILGDGS-KGFPPKAPYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVG 190 (235)
T ss_dssp --SEEEEESCGG-GCCGGGCCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEEC
T ss_pred --CcEEEECCcc-cCCCCCCCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEe
Confidence 6999999973 33333 35999999999887753 67899999999997544
No 191
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.45 E-value=1.4e-13 Score=110.54 Aligned_cols=104 Identities=13% Similarity=0.143 Sum_probs=83.4
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..+++.. ..++++|+++.+++.++++....++ ++++..+|+.
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~-------------------~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~d~~ 98 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG-------------------WEAVLVEKDPEAVRLLKENVRRTGL---GARVVALPVE 98 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT-------------------CEEEEECCCHHHHHHHHHHHHHHTC---CCEEECSCHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC-------------------CeEEEEeCCHHHHHHHHHHHHHcCC---ceEEEeccHH
Confidence 56799999999999999998874 4599999999999999999877653 6899999987
Q ss_pred cC-C-C--CCCCeeEEEeccccccccCHHHHHHHHH--hhccCCcEEEEEeccC
Q 036563 163 AL-C-F--EDSTMDGYTIAFGIRNVTHIEKALAEAY--RVLKRGGRFLCLELSH 210 (288)
Q Consensus 163 ~~-~-~--~~~~~D~v~~~~~l~~~~~~~~~l~~~~--~~L~pgG~l~i~~~~~ 210 (288)
+. + . ..++||+|+++..++ .+....++.+. ++|+|||.+++.....
T Consensus 99 ~~~~~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 99 VFLPEAKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp HHHHHHHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred HHHHhhhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 63 2 1 124799999998765 45566677777 9999999998755433
No 192
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.43 E-value=6.9e-13 Score=113.81 Aligned_cols=106 Identities=15% Similarity=0.138 Sum_probs=88.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||||||+|..+..+++.++ ++.+++++|+++.+++.+++++...++. ++++++.+|+
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~----------------~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~i~~~~gda 140 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIP----------------EDGKILAMDINKENYELGLPVIKKAGVD-HKIDFREGPA 140 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSC----------------TTCEEEEEESCCHHHHHHHHHHHHTTCG-GGEEEEESCH
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-CCeEEEECCH
Confidence 3467999999999999999999863 3689999999999999999999887775 6899999998
Q ss_pred ccC-C-C-----CCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 162 EAL-C-F-----EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 162 ~~~-~-~-----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.+. + + +.++||+|++... ..+...+++.+.++|+|||.+++.+
T Consensus 141 ~~~l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 141 LPVLDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp HHHHHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred HHHHHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 653 2 1 1568999998754 3457889999999999999998643
No 193
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.42 E-value=3.7e-12 Score=111.99 Aligned_cols=108 Identities=16% Similarity=0.172 Sum_probs=82.6
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC---CCCCceEEEEc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG---YPDKSLLWVEG 159 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~---~~~~~v~~~~~ 159 (288)
++.+|||||||+|..+..+++.. +..+++++|+++.+++.+++.+...+ +..++++++.+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~-----------------~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~ 145 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHK-----------------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVID 145 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCT-----------------TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECS
T ss_pred CCCEEEEEeCChhHHHHHHHhCC-----------------CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEC
Confidence 45799999999999999998874 35789999999999999999876542 23368999999
Q ss_pred ccccC-CCCCCCeeEEEeccccccccC----HHHHHHHHHhhccCCcEEEEEe
Q 036563 160 DAEAL-CFEDSTMDGYTIAFGIRNVTH----IEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 160 d~~~~-~~~~~~~D~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
|+... ....++||+|++.......+. ...+++.+.++|+|||.+++..
T Consensus 146 D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 146 DGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CSCC---CCCCCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred hHHHHHhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 98764 334578999999665332221 1679999999999999999753
No 194
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.42 E-value=6.4e-13 Score=124.46 Aligned_cols=115 Identities=15% Similarity=0.206 Sum_probs=93.8
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
.+.+.+.+.+...++.+|||+|||+|.++..+++. +..+++++|+++ +++.+++++...++
T Consensus 145 ~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~------------------~~~~V~gvD~s~-~l~~A~~~~~~~gl 205 (480)
T 3b3j_A 145 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQA------------------GARKIYAVEAST-MAQHAEVLVKSNNL 205 (480)
T ss_dssp HHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHT------------------TCSEEEEEECHH-HHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHc------------------CCCEEEEEEcHH-HHHHHHHHHHHcCC
Confidence 34455666666667789999999999999988774 247999999998 99999999888877
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEecccccccc--CHHHHHHHHHhhccCCcEEEE
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVT--HIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i 205 (288)
. ++++++.+|+.+++++ ++||+|+++..+++.. +....+.++.++|+|||.+++
T Consensus 206 ~-~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 206 T-DRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp T-TTEEEEESCTTTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred C-CcEEEEECchhhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 6 6899999999887654 4799999987766654 346678889999999999984
No 195
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.42 E-value=2.6e-12 Score=111.90 Aligned_cols=118 Identities=14% Similarity=0.112 Sum_probs=94.9
Q ss_pred HHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 75 LVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 75 ~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+...+...++.+|||+|||+|..+..+++... ...+++++|+++.+++.+++++...++. ++
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~----------------~~~~v~avD~~~~~l~~~~~~~~~~g~~--~v 136 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMK----------------NKGTIVAVEISKTRTKALKSNINRMGVL--NT 136 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTT----------------TCSEEEEEESCHHHHHHHHHHHHHTTCC--SE
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcC----------------CCCEEEEECCCHHHHHHHHHHHHHhCCC--cE
Confidence 34556677888999999999999999998763 2379999999999999999999887764 89
Q ss_pred EEEEcccccCCC----CCCCeeEEEeccccccc------------------cCHHHHHHHHHhhccCCcEEEEEeccC
Q 036563 155 LWVEGDAEALCF----EDSTMDGYTIAFGIRNV------------------THIEKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 155 ~~~~~d~~~~~~----~~~~~D~v~~~~~l~~~------------------~~~~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
.+..+|+..++. ..++||+|++....... .....+|+++.++|||||.+++...+.
T Consensus 137 ~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 137 IIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 999999887643 25689999987433211 234778999999999999999877655
No 196
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.42 E-value=1.7e-12 Score=113.74 Aligned_cols=115 Identities=11% Similarity=0.153 Sum_probs=88.7
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
.+.+.+...+...++.+|||+|||+|.++..++.. + ..+++++|+|+.+++.++++....++
T Consensus 110 ~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-----------------~~~v~~vDis~~al~~A~~n~~~~~l 171 (284)
T 1nv8_A 110 ELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-----------------DAIVFATDVSSKAVEIARKNAERHGV 171 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-----------------SCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-----------------CCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 34445555544335679999999999999999887 3 58999999999999999999988877
Q ss_pred CCCceEEEEcccccCCCCCCCe---eEEEeccccc-----------ccc--------CHHHHHHHHH-hhccCCcEEEE
Q 036563 150 PDKSLLWVEGDAEALCFEDSTM---DGYTIAFGIR-----------NVT--------HIEKALAEAY-RVLKRGGRFLC 205 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~---D~v~~~~~l~-----------~~~--------~~~~~l~~~~-~~L~pgG~l~i 205 (288)
. +++.++.+|+.+. .+ ++| |+|+++.... |.+ +...+++++. +.|+|||.+++
T Consensus 172 ~-~~v~~~~~D~~~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~ 247 (284)
T 1nv8_A 172 S-DRFFVRKGEFLEP-FK-EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLM 247 (284)
T ss_dssp T-TSEEEEESSTTGG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEE
T ss_pred C-CceEEEECcchhh-cc-cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEE
Confidence 5 5699999998763 22 468 9999984322 111 1236899999 99999999986
No 197
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.41 E-value=2e-12 Score=115.64 Aligned_cols=115 Identities=17% Similarity=0.146 Sum_probs=88.2
Q ss_pred HHHhhcC-CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 74 RLVSKLN-PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 74 ~~~~~l~-~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
.+.+.+. ..++.+|||+|||+|.++..++... .+++++|+|+.+++.+++++...++.+.
T Consensus 143 ~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~g-------------------a~V~~VD~s~~al~~a~~n~~~~gl~~~ 203 (332)
T 2igt_A 143 WLKNAVETADRPLKVLNLFGYTGVASLVAAAAG-------------------AEVTHVDASKKAIGWAKENQVLAGLEQA 203 (332)
T ss_dssp HHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTT-------------------CEEEEECSCHHHHHHHHHHHHHHTCTTS
T ss_pred HHHHHHHhcCCCCcEEEcccccCHHHHHHHHcC-------------------CEEEEEECCHHHHHHHHHHHHHcCCCcc
Confidence 3444442 3456799999999999999998863 5999999999999999999988877522
Q ss_pred ceEEEEcccccCCC----CCCCeeEEEecccc----------ccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 153 SLLWVEGDAEALCF----EDSTMDGYTIAFGI----------RNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 153 ~v~~~~~d~~~~~~----~~~~~D~v~~~~~l----------~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
++.++.+|+.++.. ..++||+|+++... +...+...+++.+.++|+|||.+++..
T Consensus 204 ~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 204 PIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp CEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred ceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 59999999876531 14689999996542 122346788999999999999977643
No 198
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.41 E-value=1.9e-12 Score=109.29 Aligned_cols=116 Identities=20% Similarity=0.294 Sum_probs=88.7
Q ss_pred HHHHHhhc--CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC-
Q 036563 72 KDRLVSKL--NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG- 148 (288)
Q Consensus 72 ~~~~~~~l--~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~- 148 (288)
...+.+.+ ...++.+|||+|||+|..+..+++..+.. ...+..+++++|+++.+++.++++....+
T Consensus 71 ~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~-----------~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 139 (227)
T 1r18_A 71 HAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAK-----------GVDADTRIVGIEHQAELVRRSKANLNTDDR 139 (227)
T ss_dssp HHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHS-----------CCCTTCEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccc-----------cCCccCEEEEEEcCHHHHHHHHHHHHhcCc
Confidence 34455555 35677899999999999999999876300 00002589999999999999999876543
Q ss_pred ----CCCCceEEEEcccccCCCCC-CCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 149 ----YPDKSLLWVEGDAEALCFED-STMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 149 ----~~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
. .++.+..+|+.. +++. ++||+|++...++++. +++.+.|+|||.+++..
T Consensus 140 ~~~~~--~~v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 140 SMLDS--GQLLIVEGDGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPV 194 (227)
T ss_dssp HHHHH--TSEEEEESCGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEE
T ss_pred cccCC--CceEEEECCccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEE
Confidence 2 479999999876 3333 6899999999988764 67899999999999753
No 199
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.41 E-value=1.8e-12 Score=109.22 Aligned_cols=117 Identities=11% Similarity=0.131 Sum_probs=89.7
Q ss_pred HHHHhhc--CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC-
Q 036563 73 DRLVSKL--NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY- 149 (288)
Q Consensus 73 ~~~~~~l--~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~- 149 (288)
..+.+.+ ...++.+|||+|||+|.++..+++..+.. ..+..+++++|+++.+++.++++....++
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~------------~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~ 135 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVL------------ENKNSYVIGLERVKDLVNFSLENIKRDKPE 135 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTT------------TCTTCEEEEEESCHHHHHHHHHHHHHHCGG
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhccc------------CCCCCEEEEEeCCHHHHHHHHHHHHHcCcc
Confidence 3444555 35677899999999999999998875100 00135999999999999999999877652
Q ss_pred --CCCceEEEEcccccCC----CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 150 --PDKSLLWVEGDAEALC----FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 150 --~~~~v~~~~~d~~~~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
...++.+..+|+.... ...++||+|++...++++ ++++.+.|+|||.+++..
T Consensus 136 ~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 136 LLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPI 193 (227)
T ss_dssp GGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEE
T ss_pred ccccCCEEEEECChHhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEE
Confidence 0147999999987754 445689999999988765 477899999999999753
No 200
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.41 E-value=2e-12 Score=110.59 Aligned_cols=107 Identities=21% Similarity=0.289 Sum_probs=84.1
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc--------CCCCCc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER--------GYPDKS 153 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--------~~~~~~ 153 (288)
.++.+|||||||+|.++..+++.. +...++++|+++.+++.+++++... ++ .+
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~-----------------~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~--~n 108 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAF-----------------PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGF--QN 108 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHS-----------------TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTT--TT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC-----------------CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCC--Cc
Confidence 356789999999999999999886 3579999999999999999887654 44 47
Q ss_pred eEEEEccccc-CC--CCCCCeeEEEeccccccccC--------HHHHHHHHHhhccCCcEEEEEe
Q 036563 154 LLWVEGDAEA-LC--FEDSTMDGYTIAFGIRNVTH--------IEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 154 v~~~~~d~~~-~~--~~~~~~D~v~~~~~l~~~~~--------~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+.++.+|+.+ ++ +..+.+|.|++.+.-.+... ...++.++.++|+|||.+++..
T Consensus 109 v~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 109 INVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp EEEEECCTTSCGGGTSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeccHHHHHHHhccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 9999999876 44 56778999986543211110 0479999999999999999743
No 201
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.41 E-value=9.3e-13 Score=112.25 Aligned_cols=100 Identities=11% Similarity=0.064 Sum_probs=80.0
Q ss_pred CCCeEEEecCCccHHHHHHHHh---hhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDT---VNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEG 159 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 159 (288)
++.+|||||||+|..+..+++. .. +.++|+++|+++.+++.++. .. ++++++.+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~----------------~~~~V~gvD~s~~~l~~a~~------~~-~~v~~~~g 137 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMG----------------IDCQVIGIDRDLSRCQIPAS------DM-ENITLHQG 137 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTT----------------CCCEEEEEESCCTTCCCCGG------GC-TTEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcC----------------CCCEEEEEeCChHHHHHHhc------cC-CceEEEEC
Confidence 3579999999999999999887 22 46899999999999887761 11 58999999
Q ss_pred ccccC---CCCC-CCeeEEEeccccccccCHHHHHHHHHh-hccCCcEEEEEec
Q 036563 160 DAEAL---CFED-STMDGYTIAFGIRNVTHIEKALAEAYR-VLKRGGRFLCLEL 208 (288)
Q Consensus 160 d~~~~---~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~-~L~pgG~l~i~~~ 208 (288)
|+... +... .+||+|++... | .+...++.++.+ +|+|||++++.+.
T Consensus 138 D~~~~~~l~~~~~~~fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 138 DCSDLTTFEHLREMAHPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSSCSGGGGGGSSSCSSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred cchhHHHHHhhccCCCCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 99874 4333 37999998765 3 367889999997 9999999997543
No 202
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.40 E-value=1.2e-12 Score=111.08 Aligned_cols=106 Identities=19% Similarity=0.212 Sum_probs=86.9
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|..+..+++..+ +..+++++|+++.+++.+++++...++. +++.+..+|+.
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~----------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~~d~~ 134 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLP----------------PDGQIIACDQDPNATAIAKKYWQKAGVA-EKISLRLGPAL 134 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSC----------------TTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEESCHH
T ss_pred CCCEEEEecCCCCHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCHH
Confidence 467999999999999999998863 3579999999999999999998877765 57999999975
Q ss_pred cC----CCCC--CCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 163 AL----CFED--STMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 163 ~~----~~~~--~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+. +..+ ++||+|++... ..+...+++++.++|+|||.+++.+.
T Consensus 135 ~~l~~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv~~~~ 183 (232)
T 3cbg_A 135 ATLEQLTQGKPLPEFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMVIDNV 183 (232)
T ss_dssp HHHHHHHTSSSCCCEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEEEECT
T ss_pred HHHHHHHhcCCCCCcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 42 2222 68999998754 24567899999999999999997543
No 203
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.40 E-value=4.7e-13 Score=113.80 Aligned_cols=151 Identities=17% Similarity=0.202 Sum_probs=90.7
Q ss_pred HhhcCC-CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 76 VSKLNP-FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 76 ~~~l~~-~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+..+.. .++.+|||+|||||.++..+++.. ..+++++|+|+.|++.++++.. ++
T Consensus 29 L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g------------------~~~V~gvDis~~ml~~a~~~~~-------~~ 83 (232)
T 3opn_A 29 LKEFHLEINGKTCLDIGSSTGGFTDVMLQNG------------------AKLVYALDVGTNQLAWKIRSDE-------RV 83 (232)
T ss_dssp HHHTTCCCTTCEEEEETCTTSHHHHHHHHTT------------------CSEEEEECSSCCCCCHHHHTCT-------TE
T ss_pred HHHcCCCCCCCEEEEEccCCCHHHHHHHhcC------------------CCEEEEEcCCHHHHHHHHHhCc-------cc
Confidence 344443 346699999999999999998873 2599999999999998776532 22
Q ss_pred EEE-EcccccC---CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccccc
Q 036563 155 LWV-EGDAEAL---CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPA 230 (288)
Q Consensus 155 ~~~-~~d~~~~---~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
... ..++... .++...+|.+.+..++.++ ..++++++++|+|||.+++.. .| .+........ .
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l---~~~l~~i~rvLkpgG~lv~~~--~p---~~e~~~~~~~-----~ 150 (232)
T 3opn_A 84 VVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL---DLILPPLYEILEKNGEVAALI--KP---QFEAGREQVG-----K 150 (232)
T ss_dssp EEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEE--CH---HHHSCHHHHC------
T ss_pred cccccceEEEeCHhHcCcCCCCEEEEEEEhhhH---HHHHHHHHHhccCCCEEEEEE--Cc---ccccCHHHhC-----c
Confidence 211 1122111 1111124555555444433 678999999999999999743 21 1111111110 0
Q ss_pred ccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 231 IGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
.| .+ .+.. .+..+.+++.++++++||+++.+...
T Consensus 151 ~G-~~-~d~~---------~~~~~~~~l~~~l~~aGf~v~~~~~~ 184 (232)
T 3opn_A 151 NG-II-RDPK---------VHQMTIEKVLKTATQLGFSVKGLTFS 184 (232)
T ss_dssp CC-CC-CCHH---------HHHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred CC-ee-cCcc---------hhHHHHHHHHHHHHHCCCEEEEEEEc
Confidence 00 00 0000 11126789999999999999887643
No 204
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.39 E-value=1.9e-12 Score=110.28 Aligned_cols=105 Identities=15% Similarity=0.144 Sum_probs=87.1
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||||||+|..+..+++..+ ++.+++++|+++.+++.+++++...++. +++++..+|+
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~----------------~~~~v~~iD~~~~~~~~a~~~~~~~g~~-~~i~~~~gda 131 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIP----------------DDGKITAIDFDREAYEIGLPFIRKAGVE-HKINFIESDA 131 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSC----------------TTCEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCH
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEEcCH
Confidence 3467999999999999999999863 3689999999999999999999888775 6799999998
Q ss_pred ccC-C-C-----CCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 162 EAL-C-F-----EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 162 ~~~-~-~-----~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
.+. + + +.++||+|++... ..+...+++.+.++|+|||.+++.
T Consensus 132 ~~~l~~l~~~~~~~~~fD~I~~d~~---~~~~~~~l~~~~~~L~pGG~lv~d 180 (237)
T 3c3y_A 132 MLALDNLLQGQESEGSYDFGFVDAD---KPNYIKYHERLMKLVKVGGIVAYD 180 (237)
T ss_dssp HHHHHHHHHSTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHhccCCCCCcCEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEe
Confidence 653 2 1 2468999998643 235678999999999999999864
No 205
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.39 E-value=7.5e-12 Score=115.78 Aligned_cols=121 Identities=21% Similarity=0.258 Sum_probs=96.6
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
....+...+...++.+|||+|||+|..+..+++.. ++.+++++|+++.+++.+++++...++
T Consensus 234 ~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~-----------------~~~~v~a~D~~~~~l~~~~~~~~~~g~- 295 (429)
T 1sqg_A 234 SAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVA-----------------PEAQVVAVDIDEQRLSRVYDNLKRLGM- 295 (429)
T ss_dssp HHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHC-----------------TTCEEEEEESSTTTHHHHHHHHHHTTC-
T ss_pred HHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHc-----------------CCCEEEEECCCHHHHHHHHHHHHHcCC-
Confidence 33455667777888999999999999999999986 347999999999999999999888765
Q ss_pred CCceEEEEcccccCC--CCCCCeeEEEeccc------cccccCH----------------HHHHHHHHhhccCCcEEEEE
Q 036563 151 DKSLLWVEGDAEALC--FEDSTMDGYTIAFG------IRNVTHI----------------EKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~--~~~~~~D~v~~~~~------l~~~~~~----------------~~~l~~~~~~L~pgG~l~i~ 206 (288)
++.+..+|+...+ +++++||+|+++.. +++.++. ..+|+++.+.|||||.+++.
T Consensus 296 --~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvys 373 (429)
T 1sqg_A 296 --KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA 373 (429)
T ss_dssp --CCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred --CeEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 4788999988764 45568999997432 3333332 47899999999999999988
Q ss_pred eccCC
Q 036563 207 ELSHV 211 (288)
Q Consensus 207 ~~~~~ 211 (288)
+++..
T Consensus 374 tcs~~ 378 (429)
T 1sqg_A 374 TCSVL 378 (429)
T ss_dssp ESCCC
T ss_pred ECCCC
Confidence 76653
No 206
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.39 E-value=2.8e-12 Score=105.88 Aligned_cols=103 Identities=12% Similarity=0.084 Sum_probs=79.3
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCC-CceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQE-ETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEG 159 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 159 (288)
..++.+|||+|||+|.++..+++..+ + ..+++++|+++.. .. +++.+.++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~----------------~~~~~v~gvD~s~~~-----------~~--~~v~~~~~ 70 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTK----------------NYKNKIIGIDKKIMD-----------PI--PNVYFIQG 70 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTT----------------TSCEEEEEEESSCCC-----------CC--TTCEEEEC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcC----------------CCCceEEEEeCCccC-----------CC--CCceEEEc
Confidence 35677999999999999999998862 1 4899999999832 11 47899999
Q ss_pred ccccCC-------------------------CCCCCeeEEEeccccccc----cCH-------HHHHHHHHhhccCCcEE
Q 036563 160 DAEALC-------------------------FEDSTMDGYTIAFGIRNV----THI-------EKALAEAYRVLKRGGRF 203 (288)
Q Consensus 160 d~~~~~-------------------------~~~~~~D~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l 203 (288)
|+...+ +++++||+|+++..+++. .+. ..+++++.++|+|||.+
T Consensus 71 d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~l 150 (201)
T 2plw_A 71 EIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTY 150 (201)
T ss_dssp CTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred cccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEE
Confidence 987765 456789999998877653 122 23788999999999999
Q ss_pred EEEeccCCC
Q 036563 204 LCLELSHVD 212 (288)
Q Consensus 204 ~i~~~~~~~ 212 (288)
++..+....
T Consensus 151 v~~~~~~~~ 159 (201)
T 2plw_A 151 IVKMYLGSQ 159 (201)
T ss_dssp EEEEECSTT
T ss_pred EEEEeCCCC
Confidence 986554433
No 207
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=6.3e-12 Score=111.07 Aligned_cols=110 Identities=15% Similarity=0.157 Sum_probs=86.6
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
..+|||||||+|.++..+++.+ +..+++++|+++.+++.+++.+.... .++++++.+|+..
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~-----------------p~~~v~~VEidp~vi~~Ar~~~~~~~--~~rv~v~~~Da~~ 150 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVY-----------------PQSRNTVVELDAELARLSREWFDIPR--APRVKIRVDDARM 150 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHS-----------------TTCEEEEEESCHHHHHHHHHHSCCCC--TTTEEEEESCHHH
T ss_pred CCEEEEEECCcCHHHHHHHHHC-----------------CCcEEEEEECCHHHHHHHHHhccccC--CCceEEEECcHHH
Confidence 3599999999999999999976 45799999999999999999875432 2689999999876
Q ss_pred C--CCCCCCeeEEEeccccccc-c-C--HHHHHHHHHhhccCCcEEEEEeccCCC
Q 036563 164 L--CFEDSTMDGYTIAFGIRNV-T-H--IEKALAEAYRVLKRGGRFLCLELSHVD 212 (288)
Q Consensus 164 ~--~~~~~~~D~v~~~~~l~~~-~-~--~~~~l~~~~~~L~pgG~l~i~~~~~~~ 212 (288)
+ ..++++||+|++....+.. . . ...+++.++++|+|||.+++.......
T Consensus 151 ~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~~~~ 205 (317)
T 3gjy_A 151 VAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGDHSD 205 (317)
T ss_dssp HHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEECTT
T ss_pred HHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEecCCcc
Confidence 5 2345789999986543321 1 1 267999999999999999976554443
No 208
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.38 E-value=3.4e-12 Score=111.05 Aligned_cols=106 Identities=13% Similarity=0.148 Sum_probs=89.7
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
..++.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++++...++. ++.++.+|
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~-----------------~~~~V~~vD~s~~av~~a~~n~~~n~l~--~~~~~~~d 177 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYS-----------------KPKLVYAIEKNPTAYHYLCENIKLNKLN--NVIPILAD 177 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT-----------------CCSEEEEEECCHHHHHHHHHHHHHTTCS--SEEEEESC
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhC-----------------CCCEEEEEeCCHHHHHHHHHHHHHcCCC--CEEEEECC
Confidence 4567899999999999999999885 2469999999999999999999888774 78899999
Q ss_pred cccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccC
Q 036563 161 AEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 161 ~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
+.+.+. .++||+|+++... +...++..+.+.|+|||.+++.....
T Consensus 178 ~~~~~~-~~~~D~Vi~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 178 NRDVEL-KDVADRVIMGYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp GGGCCC-TTCEEEEEECCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred hHHcCc-cCCceEEEECCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 988733 5689999988764 56778999999999999999765543
No 209
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.38 E-value=1e-12 Score=111.97 Aligned_cols=111 Identities=18% Similarity=0.236 Sum_probs=88.7
Q ss_pred hhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEE
Q 036563 77 SKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLW 156 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~ 156 (288)
..+...++.+|||+|||+|..+..+++..+ +..+++++|+++.+++.+++++...++. +++.+
T Consensus 54 ~l~~~~~~~~VLdiG~G~G~~~~~la~~~~----------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~v~~ 116 (239)
T 2hnk_A 54 ILTKISGAKRIIEIGTFTGYSSLCFASALP----------------EDGKILCCDVSEEWTNVARKYWKENGLE-NKIFL 116 (239)
T ss_dssp HHHHHHTCSEEEEECCTTCHHHHHHHHHSC----------------TTCEEEEEESCHHHHHHHHHHHHHTTCG-GGEEE
T ss_pred HHHHhhCcCEEEEEeCCCCHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC-CCEEE
Confidence 333334577999999999999999999863 2589999999999999999998877765 46999
Q ss_pred EEcccccC-C--------------CCC--CCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 157 VEGDAEAL-C--------------FED--STMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 157 ~~~d~~~~-~--------------~~~--~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
..+|+... + +++ ++||+|++.... .+...+++++.++|+|||.+++.+
T Consensus 117 ~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 117 KLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK---ENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp EESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCH---HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 99997652 1 122 689999987543 456788999999999999999754
No 210
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.38 E-value=8.5e-12 Score=109.84 Aligned_cols=107 Identities=18% Similarity=0.218 Sum_probs=81.7
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh--cCCCCCceEEEEcc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE--RGYPDKSLLWVEGD 160 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~~~~~v~~~~~d 160 (288)
.+.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++.. .++..++++++.+|
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-----------------~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D 152 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-----------------SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIAN 152 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-----------------TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESC
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-----------------CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECc
Confidence 45799999999999999998874 358999999999999999998754 22222689999999
Q ss_pred cccC-CCCCCCeeEEEecccccccc-----CHHHHHHHHHhhccCCcEEEEE
Q 036563 161 AEAL-CFEDSTMDGYTIAFGIRNVT-----HIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 161 ~~~~-~~~~~~~D~v~~~~~l~~~~-----~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
+... +...++||+|++........ ....+++++.++|+|||.+++.
T Consensus 153 ~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 204 (296)
T 1inl_A 153 GAEYVRKFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 204 (296)
T ss_dssp HHHHGGGCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhhCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 8663 33456899999865422111 1267899999999999999974
No 211
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.38 E-value=8.1e-12 Score=113.50 Aligned_cols=107 Identities=15% Similarity=0.056 Sum_probs=86.8
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+| |+|.++..++... +..+++++|+++.|++.+++++...++. +++++.+|+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~-----------------~~~~v~~vDi~~~~l~~a~~~~~~~g~~--~v~~~~~D~ 230 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSG-----------------LPKRIAVLDIDERLTKFIEKAANEIGYE--DIEIFTFDL 230 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHT-----------------CCSEEEEECSCHHHHHHHHHHHHHHTCC--CEEEECCCT
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhC-----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC--CEEEEEChh
Confidence 4578999999 9999999987764 3479999999999999999999887763 799999999
Q ss_pred cc-CCC-CCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 162 EA-LCF-EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 162 ~~-~~~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
.. ++. .+++||+|+++..++.. +...+++++.++|+|||.+++.+..
T Consensus 231 ~~~l~~~~~~~fD~Vi~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 231 RKPLPDYALHKFDTFITDPPETLE-AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp TSCCCTTTSSCBSEEEECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred hhhchhhccCCccEEEECCCCchH-HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 87 553 34689999998776543 3578999999999999965444343
No 212
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.38 E-value=1.4e-12 Score=109.99 Aligned_cols=106 Identities=15% Similarity=0.168 Sum_probs=87.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|..+..+++..+ +..+++++|+++.+++.+++++...++. .+++++.+|+
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~----------------~~~~v~~vD~~~~~~~~a~~~~~~~g~~-~~i~~~~~d~ 130 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALP----------------ADGRVVTCEVDAQPPELGRPLWRQAEAE-HKIDLRLKPA 130 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSC----------------TTCEEEEEESCSHHHHHHHHHHHHTTCT-TTEEEEESCH
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHCCCC-CeEEEEEcCH
Confidence 4567999999999999999998763 3589999999999999999999887765 6899999998
Q ss_pred ccC--CCCC----CCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 162 EAL--CFED----STMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 162 ~~~--~~~~----~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.+. .+.. ++||+|++... ..+...+++++.++|+|||.+++.+
T Consensus 131 ~~~~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 131 LETLDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp HHHHHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 653 1111 57999998654 3456789999999999999998754
No 213
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.38 E-value=1.1e-11 Score=107.97 Aligned_cols=107 Identities=19% Similarity=0.122 Sum_probs=84.3
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc--CCCCCceEEEEcc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER--GYPDKSLLWVEGD 160 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~v~~~~~d 160 (288)
.+.+|||+|||+|.++..+++.. +..+++++|+++.+++.+++.+... ++..++++++.+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-----------------~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D 137 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-----------------SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDD 137 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-----------------TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESC
T ss_pred CCCEEEEECCchHHHHHHHHhCC-----------------CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECc
Confidence 45799999999999999998774 3479999999999999999987542 3333689999999
Q ss_pred cccC-CCCCCCeeEEEeccccccccC----HHHHHHHHHhhccCCcEEEEE
Q 036563 161 AEAL-CFEDSTMDGYTIAFGIRNVTH----IEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 161 ~~~~-~~~~~~~D~v~~~~~l~~~~~----~~~~l~~~~~~L~pgG~l~i~ 206 (288)
+... +..+++||+|++....+..+. ...+++.+.++|+|||.+++.
T Consensus 138 ~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~ 188 (275)
T 1iy9_A 138 GFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (275)
T ss_dssp SHHHHHTCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHhhCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 8763 334568999999765432211 267899999999999999874
No 214
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.37 E-value=9.6e-12 Score=110.71 Aligned_cols=108 Identities=20% Similarity=0.233 Sum_probs=83.7
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh--cCCCCCceEEEEcc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE--RGYPDKSLLWVEGD 160 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~~~~~v~~~~~d 160 (288)
++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++++.. .++..++++++.+|
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~-----------------~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D 178 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYK-----------------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIED 178 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCT-----------------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESC
T ss_pred CCCEEEEEcCCccHHHHHHHHcC-----------------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEcc
Confidence 45799999999999999998764 358999999999999999998765 22222689999999
Q ss_pred cccC-CCCCCCeeEEEecccccc--ccCH--HHHHHHHHhhccCCcEEEEEe
Q 036563 161 AEAL-CFEDSTMDGYTIAFGIRN--VTHI--EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 161 ~~~~-~~~~~~~D~v~~~~~l~~--~~~~--~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+.+. +..+++||+|+++..-.. .... ..+++++.+.|+|||.+++..
T Consensus 179 ~~~~l~~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 179 ASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp HHHHHHHCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHhhcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 8663 223568999998753211 1111 689999999999999999743
No 215
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.36 E-value=2e-11 Score=101.25 Aligned_cols=94 Identities=15% Similarity=0.128 Sum_probs=77.6
Q ss_pred CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEc
Q 036563 80 NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEG 159 (288)
Q Consensus 80 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 159 (288)
...++.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++....++ ++.++.+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~------------------~~~v~~vD~~~~~~~~a~~~~~~~~~---~~~~~~~ 104 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLG------------------AKEVICVEVDKEAVDVLIENLGEFKG---KFKVFIG 104 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTT------------------CSEEEEEESCHHHHHHHHHHTGGGTT---SEEEEES
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcC------------------CCEEEEEECCHHHHHHHHHHHHHcCC---CEEEEEC
Confidence 34567899999999999999988763 25899999999999999999877653 6999999
Q ss_pred ccccCCCCCCCeeEEEecccccccc--CHHHHHHHHHhhc
Q 036563 160 DAEALCFEDSTMDGYTIAFGIRNVT--HIEKALAEAYRVL 197 (288)
Q Consensus 160 d~~~~~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L 197 (288)
|+.+++ .+||+|+++..++... ....+++.+.+++
T Consensus 105 d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l 141 (207)
T 1wy7_A 105 DVSEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS 141 (207)
T ss_dssp CGGGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC
T ss_pred chHHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc
Confidence 998864 4799999998877654 3356888888888
No 216
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.36 E-value=4.7e-12 Score=117.46 Aligned_cols=120 Identities=14% Similarity=0.194 Sum_probs=95.4
Q ss_pred HHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 74 RLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
.+...+...++.+|||+|||+|..+..+++..+ +...|+++|+++.+++.+++++...++. +
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~----------------~~g~V~AvDis~~rl~~~~~n~~r~g~~--n 157 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMK----------------GKGLLVTNEIFPKRAKILSENIERWGVS--N 157 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHT----------------TCSEEEEECSSHHHHHHHHHHHHHHTCS--S
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcC----------------CCCEEEEEeCCHHHHHHHHHHHHHcCCC--c
Confidence 445666778889999999999999999999874 3479999999999999999999988874 7
Q ss_pred eEEEEcccccCC-CCCCCeeEEEecccc------ccccCH----------------HHHHHHHHhhccCCcEEEEEeccC
Q 036563 154 LLWVEGDAEALC-FEDSTMDGYTIAFGI------RNVTHI----------------EKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 154 v~~~~~d~~~~~-~~~~~~D~v~~~~~l------~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
+.+..+|+..+. ..+++||.|+++... ..-++. ..+|.++.++|||||.++...++.
T Consensus 158 v~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 158 AIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred eEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 999999987764 235689999986542 111111 267999999999999999877655
Q ss_pred C
Q 036563 211 V 211 (288)
Q Consensus 211 ~ 211 (288)
.
T Consensus 238 ~ 238 (456)
T 3m4x_A 238 A 238 (456)
T ss_dssp C
T ss_pred c
Confidence 3
No 217
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.35 E-value=6.1e-12 Score=116.84 Aligned_cols=118 Identities=17% Similarity=0.196 Sum_probs=94.1
Q ss_pred HHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 74 RLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
.+...+...++.+|||+|||+|..+..+++..+ +.+.|+++|+++.+++.+++++...++ .
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~----------------~~g~V~AvDis~~~l~~a~~n~~r~G~--~- 152 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMG----------------GKGLLLANEVDGKRVRGLLENVERWGA--P- 152 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTT----------------TCSEEEEECSCHHHHHHHHHHHHHHCC--C-
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHcCC--e-
Confidence 345566777889999999999999999999874 347999999999999999999988876 3
Q ss_pred eEEEEcccccCC-CCCCCeeEEEeccc------cccccCH----------------HHHHHHHHhhccCCcEEEEEeccC
Q 036563 154 LLWVEGDAEALC-FEDSTMDGYTIAFG------IRNVTHI----------------EKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 154 v~~~~~d~~~~~-~~~~~~D~v~~~~~------l~~~~~~----------------~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
+.+..+|+..++ ...++||+|+++.. +...++. ..+|+++.++|||||.++...++.
T Consensus 153 v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 153 LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 889999987764 23568999997433 2222221 668999999999999999876654
No 218
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.34 E-value=1.2e-11 Score=115.65 Aligned_cols=118 Identities=16% Similarity=0.199 Sum_probs=93.7
Q ss_pred HHhhcCCC--CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 75 LVSKLNPF--PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 75 ~~~~l~~~--~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+...+... ++.+|||+|||+|..+..+++..+ +.+.|+++|+++.+++.+++++...++.
T Consensus 107 ~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~----------------~~g~V~avDis~~~l~~~~~n~~r~g~~-- 168 (479)
T 2frx_A 107 PVAALFADGNAPQRVMDVAAAPGSKTTQISARMN----------------NEGAILANEFSASRVKVLHANISRCGIS-- 168 (479)
T ss_dssp HHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTT----------------TCSEEEEECSSHHHHHHHHHHHHHHTCC--
T ss_pred HHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHcCCC--
Confidence 34556666 788999999999999999999863 3579999999999999999999888774
Q ss_pred ceEEEEcccccCCC-CCCCeeEEEeccc------cccccC----------------HHHHHHHHHhhccCCcEEEEEecc
Q 036563 153 SLLWVEGDAEALCF-EDSTMDGYTIAFG------IRNVTH----------------IEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 153 ~v~~~~~d~~~~~~-~~~~~D~v~~~~~------l~~~~~----------------~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
++.++.+|+..++. ..++||.|++... +...++ ...+|.++.++|||||.+++..++
T Consensus 169 nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 169 NVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp SEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cEEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEeccc
Confidence 79999999887643 4568999998432 222221 136799999999999999987765
Q ss_pred C
Q 036563 210 H 210 (288)
Q Consensus 210 ~ 210 (288)
.
T Consensus 249 ~ 249 (479)
T 2frx_A 249 L 249 (479)
T ss_dssp C
T ss_pred C
Confidence 4
No 219
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.33 E-value=1e-11 Score=111.06 Aligned_cols=108 Identities=21% Similarity=0.276 Sum_probs=84.8
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc--CCCCCceEEEEc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER--GYPDKSLLWVEG 159 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~v~~~~~ 159 (288)
.++.+|||||||+|..+..+++.. +..+++++|+++.+++.+++++... ++..++++++.+
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~-----------------~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~ 181 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA-----------------SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG 181 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT-----------------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES
T ss_pred CCCCEEEEECCCccHHHHHHHHcC-----------------CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC
Confidence 456799999999999999998874 3589999999999999999987642 332268999999
Q ss_pred ccccC--CCCCCCeeEEEecccc--ccccC--HHHHHHHHHhhccCCcEEEEE
Q 036563 160 DAEAL--CFEDSTMDGYTIAFGI--RNVTH--IEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 160 d~~~~--~~~~~~~D~v~~~~~l--~~~~~--~~~~l~~~~~~L~pgG~l~i~ 206 (288)
|+... ..++++||+|+++... +...+ ...+++++.++|+|||.+++.
T Consensus 182 D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 182 DGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp CHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred CHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 98764 2345689999986542 11112 368999999999999999975
No 220
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.33 E-value=3.5e-11 Score=99.33 Aligned_cols=90 Identities=14% Similarity=0.227 Sum_probs=71.6
Q ss_pred CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEc
Q 036563 80 NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEG 159 (288)
Q Consensus 80 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 159 (288)
...++.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++.. +++++.+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~------------------~~~v~~vD~~~~~~~~a~~~~~-------~~~~~~~ 102 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLG------------------AESVTAFDIDPDAIETAKRNCG-------GVNFMVA 102 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTT------------------BSEEEEEESCHHHHHHHHHHCT-------TSEEEEC
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcC------------------CCEEEEEECCHHHHHHHHHhcC-------CCEEEEC
Confidence 34567899999999999999888762 2579999999999999998763 5889999
Q ss_pred ccccCCCCCCCeeEEEeccccccccC--HHHHHHHHHhhc
Q 036563 160 DAEALCFEDSTMDGYTIAFGIRNVTH--IEKALAEAYRVL 197 (288)
Q Consensus 160 d~~~~~~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L 197 (288)
|+.+++ ++||+|+++..+++..+ ...+++++.+.+
T Consensus 103 d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 103 DVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CGGGCC---CCEEEEEECCCC-------CHHHHHHHHHHE
T ss_pred cHHHCC---CCeeEEEECCCchhccCchhHHHHHHHHHhc
Confidence 998764 58999999999888754 346888888888
No 221
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.33 E-value=1.2e-11 Score=109.77 Aligned_cols=107 Identities=17% Similarity=0.197 Sum_probs=81.0
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc--CCCCCceEEEEcc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER--GYPDKSLLWVEGD 160 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~v~~~~~d 160 (288)
++.+|||||||+|..+..+++.. +..+++++|+++.+++.+++++... ++..++++++.+|
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~-----------------~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D 170 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHE-----------------SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGD 170 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCT-----------------TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSC
T ss_pred CCCEEEEEcCCcCHHHHHHHHcC-----------------CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEECh
Confidence 45799999999999999998874 3589999999999999999987643 2222689999999
Q ss_pred cccC-CCCCCCeeEEEeccccccccC--H--HHHHHHHHhhccCCcEEEEE
Q 036563 161 AEAL-CFEDSTMDGYTIAFGIRNVTH--I--EKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 161 ~~~~-~~~~~~~D~v~~~~~l~~~~~--~--~~~l~~~~~~L~pgG~l~i~ 206 (288)
+... +...++||+|++....+..+. . ..+++++.++|+|||.+++.
T Consensus 171 ~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 171 GFEFLKNHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp HHHHHHHCTTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHhcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence 8763 334568999998664221111 1 67899999999999999964
No 222
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.33 E-value=2.5e-11 Score=106.13 Aligned_cols=108 Identities=19% Similarity=0.203 Sum_probs=84.3
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC--CCCCceEEEEc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG--YPDKSLLWVEG 159 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~--~~~~~v~~~~~ 159 (288)
.++.+|||+|||+|..+..+++.. +..+++++|+++.+++.+++.+...+ +..++++++.+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-----------------~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~ 139 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-----------------SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIE 139 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-----------------TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEES
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-----------------CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEEC
Confidence 456799999999999999998764 35899999999999999999875432 21268999999
Q ss_pred ccccC-CCCCCCeeEEEecccccccc--CH--HHHHHHHHhhccCCcEEEEE
Q 036563 160 DAEAL-CFEDSTMDGYTIAFGIRNVT--HI--EKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 160 d~~~~-~~~~~~~D~v~~~~~l~~~~--~~--~~~l~~~~~~L~pgG~l~i~ 206 (288)
|+... +...++||+|++....+..+ .. ..+++.++++|+|||.+++.
T Consensus 140 D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 191 (283)
T 2i7c_A 140 DASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ 191 (283)
T ss_dssp CHHHHHHHCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred ChHHHHHhCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 98764 22356899999965433222 22 68999999999999999975
No 223
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.32 E-value=7.9e-11 Score=102.41 Aligned_cols=111 Identities=11% Similarity=0.137 Sum_probs=90.5
Q ss_pred HHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 72 KDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 72 ~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
+..+...+. ++.+|||+|||+|.++..++... ..+|+++|+++.+++.+++++..+++.
T Consensus 116 r~ri~~~~~--~g~~VlD~~aG~G~~~i~~a~~g------------------~~~V~avD~np~a~~~~~~N~~~N~v~- 174 (278)
T 3k6r_A 116 RVRMAKVAK--PDELVVDMFAGIGHLSLPIAVYG------------------KAKVIAIEKDPYTFKFLVENIHLNKVE- 174 (278)
T ss_dssp HHHHHHHCC--TTCEEEETTCTTTTTTHHHHHHT------------------CCEEEEECCCHHHHHHHHHHHHHTTCT-
T ss_pred HHHHHHhcC--CCCEEEEecCcCcHHHHHHHHhc------------------CCeEEEEECCHHHHHHHHHHHHHcCCC-
Confidence 345555554 57899999999999999998873 378999999999999999999999887
Q ss_pred CceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 152 KSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 152 ~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+++.++++|+.++.. .+.||.|+++... ....+|..+.++|++||.+.+.++
T Consensus 175 ~~v~~~~~D~~~~~~-~~~~D~Vi~~~p~----~~~~~l~~a~~~lk~gG~ih~~~~ 226 (278)
T 3k6r_A 175 DRMSAYNMDNRDFPG-ENIADRILMGYVV----RTHEFIPKALSIAKDGAIIHYHNT 226 (278)
T ss_dssp TTEEEECSCTTTCCC-CSCEEEEEECCCS----SGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred CcEEEEeCcHHHhcc-ccCCCEEEECCCC----cHHHHHHHHHHHcCCCCEEEEEee
Confidence 789999999987753 4689999977542 345678888899999999876544
No 224
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.30 E-value=2.5e-12 Score=123.09 Aligned_cols=107 Identities=17% Similarity=0.154 Sum_probs=88.6
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||||||+|.++..+++. +++|+|+|.++.+++.|+.+..+.+. .++.|.+++++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~-------------------ga~V~giD~~~~~i~~a~~~a~~~~~--~~~~~~~~~~~ 124 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK-------------------GATIVGIDFQQENINVCRALAEENPD--FAAEFRVGRIE 124 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT-------------------TCEEEEEESCHHHHHHHHHHHHTSTT--SEEEEEECCHH
T ss_pred CCCeEEEECCCCcHHHHHHHhC-------------------CCEEEEECCCHHHHHHHHHHHHhcCC--CceEEEECCHH
Confidence 4679999999999999999987 38999999999999999999877654 37999999998
Q ss_pred cC--CCCCCCeeEEEeccccccccCHHH--HHHHHHhhccCCcEEEEEeccC
Q 036563 163 AL--CFEDSTMDGYTIAFGIRNVTHIEK--ALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 163 ~~--~~~~~~~D~v~~~~~l~~~~~~~~--~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
++ .+.+++||+|+|..+++|++++.. .+..+.+.|+++|..++..+..
T Consensus 125 ~~~~~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 125 EVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp HHHHHCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred HHhhhccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 87 456678999999999999987653 3556777788888777655544
No 225
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.30 E-value=4e-11 Score=104.73 Aligned_cols=104 Identities=15% Similarity=0.180 Sum_probs=81.3
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc--CC-------CCCc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER--GY-------PDKS 153 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~-------~~~~ 153 (288)
++.+|||||||+|..+..+++. + ..+++++|+++.+++.+++++ .. ++ ..++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~-----------------~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~ 135 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-D-----------------VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEK 135 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-C-----------------CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSS
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-C-----------------CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCc
Confidence 4579999999999999998887 3 479999999999999999987 33 22 2368
Q ss_pred eEEEEcccccC-CCCCCCeeEEEecccccccc--C--HHHHHHHHHhhccCCcEEEEE
Q 036563 154 LLWVEGDAEAL-CFEDSTMDGYTIAFGIRNVT--H--IEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 154 v~~~~~d~~~~-~~~~~~~D~v~~~~~l~~~~--~--~~~~l~~~~~~L~pgG~l~i~ 206 (288)
++++.+|+... .. +++||+|++....+..+ . ...+++++.++|+|||.+++.
T Consensus 136 v~~~~~D~~~~l~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 136 AKLTIGDGFEFIKN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp EEEEESCHHHHHHH-CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEECchHHHhcc-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 99999998653 22 56899999876532211 1 267899999999999999874
No 226
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.29 E-value=7.8e-11 Score=105.80 Aligned_cols=149 Identities=13% Similarity=0.054 Sum_probs=101.3
Q ss_pred HHHHHHHhHhhHHHhhh----hhhhhhhhhHHHHHHHHhhc-CCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhccc
Q 036563 43 QLVSNVFSSVAKNYDLM----NDLMSGGLHRLWKDRLVSKL-NPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVL 117 (288)
Q Consensus 43 ~~~~~~~~~~~~~y~~~----~~~~~~~~~~~~~~~~~~~l-~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~ 117 (288)
..+..+|+.+...+... ...++...-..+...++..+ ...++.+|||+|||+|.++..+++.....
T Consensus 85 ~~~g~~ye~~~~~~~~~~~~~g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~--------- 155 (344)
T 2f8l_A 85 EEIRKGLQLALLKGMKHGIQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELK--------- 155 (344)
T ss_dssp HHHHHHHHHHHHHHTSSSCCGGGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTT---------
T ss_pred hHHHHHHHHHHHHHhhcccccCcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHh---------
Confidence 45677777766666541 11122111111112233333 44466799999999999999998886300
Q ss_pred ccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCH-----------
Q 036563 118 EDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI----------- 186 (288)
Q Consensus 118 ~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~----------- 186 (288)
......++|+|+++.+++.|+.++...+. ++.+..+|..... ..++||+|+++..+.+++..
T Consensus 156 ---~~~~~~v~GiDi~~~~~~~a~~n~~~~g~---~~~i~~~D~l~~~-~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~ 228 (344)
T 2f8l_A 156 ---GDVDVHASGVDVDDLLISLALVGADLQRQ---KMTLLHQDGLANL-LVDPVDVVISDLPVGYYPDDENAKTFELCRE 228 (344)
T ss_dssp ---SSCEEEEEEEESCHHHHHHHHHHHHHHTC---CCEEEESCTTSCC-CCCCEEEEEEECCCSEESCHHHHTTSTTCCS
T ss_pred ---cCCCceEEEEECCHHHHHHHHHHHHhCCC---CceEEECCCCCcc-ccCCccEEEECCCCCCcCchhhhhhccccCC
Confidence 00127899999999999999998876654 5788999976532 35689999999887654322
Q ss_pred -------HHHHHHHHhhccCCcEEEEEe
Q 036563 187 -------EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 187 -------~~~l~~~~~~L~pgG~l~i~~ 207 (288)
..++.++.+.|+|||+++++.
T Consensus 229 ~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 229 EGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp SSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 257999999999999998764
No 227
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.29 E-value=6.5e-12 Score=111.00 Aligned_cols=109 Identities=20% Similarity=0.217 Sum_probs=83.3
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh--cCCCCCceEEEEc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE--RGYPDKSLLWVEG 159 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~--~~~~~~~v~~~~~ 159 (288)
.++.+|||||||+|..+..+++.. +..+++++|+++.+++.+++++.. .++..++++++.+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-----------------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~ 156 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-----------------SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG 156 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-----------------TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-----------------CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC
Confidence 446799999999999999998874 357999999999999999998764 2332268999999
Q ss_pred ccccC-CCCCCCeeEEEecccccccc----CHHHHHHHHHhhccCCcEEEEEe
Q 036563 160 DAEAL-CFEDSTMDGYTIAFGIRNVT----HIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 160 d~~~~-~~~~~~~D~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
|+... +..+++||+|++....+..+ ....+++++.++|+|||.+++..
T Consensus 157 Da~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 157 DGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp CHHHHHHTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred cHHHHHhhCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 98663 33457899999866533211 12468999999999999999754
No 228
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.29 E-value=2.3e-11 Score=99.86 Aligned_cols=111 Identities=16% Similarity=0.188 Sum_probs=77.4
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEE-Ec
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWV-EG 159 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~-~~ 159 (288)
..++.+|||+|||+|.++..+++..+... .....+..+++++|+++.+ .. +++.+. .+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~--------~~~~~~~~~v~~vD~s~~~-----------~~--~~~~~~~~~ 78 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAG--------TDPSSPVGFVLGVDLLHIF-----------PL--EGATFLCPA 78 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTC--------CCTTSCCCEEEEECSSCCC-----------CC--TTCEEECSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhcccc--------ccccCCCceEEEEechhcc-----------cC--CCCeEEEec
Confidence 35678999999999999999999863000 0000011789999999842 11 467888 88
Q ss_pred ccccCC--------CCCCCeeEEEeccccccc----cCH-------HHHHHHHHhhccCCcEEEEEeccCCC
Q 036563 160 DAEALC--------FEDSTMDGYTIAFGIRNV----THI-------EKALAEAYRVLKRGGRFLCLELSHVD 212 (288)
Q Consensus 160 d~~~~~--------~~~~~~D~v~~~~~l~~~----~~~-------~~~l~~~~~~L~pgG~l~i~~~~~~~ 212 (288)
|+.... +++++||+|++...++.. .+. ..+++++.++|+|||.+++..+....
T Consensus 79 d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 79 DVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp CTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred cCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 876542 334589999997654432 222 47899999999999999987765543
No 229
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.29 E-value=8.3e-12 Score=110.82 Aligned_cols=108 Identities=20% Similarity=0.190 Sum_probs=85.5
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc--C-CCCCceEEEEc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER--G-YPDKSLLWVEG 159 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~-~~~~~v~~~~~ 159 (288)
++.+|||||||+|..+..+++.. +..+++++|+++.+++.+++++... + +..++++++.+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~-----------------~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~ 139 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHP-----------------TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVID 139 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTST-----------------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES
T ss_pred CCCeEEEEcCCcCHHHHHHHhcC-----------------CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEc
Confidence 45799999999999999998874 3579999999999999999987541 1 21268999999
Q ss_pred ccccC-CCCCCCeeEEEecccccc---cc--C--HHHHHHHHHhhccCCcEEEEEe
Q 036563 160 DAEAL-CFEDSTMDGYTIAFGIRN---VT--H--IEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 160 d~~~~-~~~~~~~D~v~~~~~l~~---~~--~--~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
|+... +..+++||+|++....+. -+ . ...++++++++|+|||.+++..
T Consensus 140 D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 140 DARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp CHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred hHHHHHHhcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 98763 334578999999876543 11 1 3688999999999999999753
No 230
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.28 E-value=2.8e-11 Score=105.98 Aligned_cols=114 Identities=20% Similarity=0.296 Sum_probs=87.0
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
..+.+.+++.+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....+
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-------------------~~v~~vD~~~~~~~~a~~~~~~~~ 74 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-------------------KKVVACELDPRLVAELHKRVQGTP 74 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS-------------------SEEEEEESCHHHHHHHHHHHTTST
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC-------------------CEEEEEECCHHHHHHHHHHHHhcC
Confidence 4455677788887788899999999999999999874 689999999999999999886554
Q ss_pred CCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHH-HHH--------------HHH--HhhccCCcEEE
Q 036563 149 YPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIE-KAL--------------AEA--YRVLKRGGRFL 204 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~-~~l--------------~~~--~~~L~pgG~l~ 204 (288)
.. ++++++.+|+.+.+++ .||+|+++..++...+.. .++ +++ +++++|||.++
T Consensus 75 ~~-~~v~~~~~D~~~~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 75 VA-SKLQVLVGDVLKTDLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp TG-GGEEEEESCTTTSCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred CC-CceEEEEcceecccch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 43 4799999999887655 699999976654432221 222 222 36899999654
No 231
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.27 E-value=5.7e-11 Score=101.22 Aligned_cols=111 Identities=13% Similarity=0.030 Sum_probs=89.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+.+.++ ++.+|||||||+|-++..++... +..+|+++|+++.|++.++.++...++
T Consensus 124 ~~i~~~i~--~p~~VLDLGCG~GpLAl~~~~~~-----------------p~a~y~a~DId~~~le~a~~~l~~~g~--- 181 (281)
T 3lcv_B 124 RELFRHLP--RPNTLRDLACGLNPLAAPWMGLP-----------------AETVYIASDIDARLVGFVDEALTRLNV--- 181 (281)
T ss_dssp HHHGGGSC--CCSEEEETTCTTGGGCCTTTTCC-----------------TTCEEEEEESBHHHHHHHHHHHHHTTC---
T ss_pred HHHHhccC--CCceeeeeccCccHHHHHHHhhC-----------------CCCEEEEEeCCHHHHHHHHHHHHhcCC---
Confidence 34445553 35699999999999999888875 568999999999999999999988775
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEEe
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+..+...|....+ +.++||+++++-+++++++- ...+ ++...|+++|.++-.+
T Consensus 182 ~~~~~v~D~~~~~-p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 182 PHRTNVADLLEDR-LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp CEEEEECCTTTSC-CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred CceEEEeeecccC-CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 4788888876544 45689999999999998654 2345 8999999999998543
No 232
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.26 E-value=6.1e-12 Score=109.59 Aligned_cols=112 Identities=12% Similarity=0.049 Sum_probs=78.6
Q ss_pred hhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhh-hcCCCCCceE
Q 036563 77 SKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRAL-ERGYPDKSLL 155 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~-~~~~~~~~v~ 155 (288)
+.....++.+|||+|||+|.++..+++. .+|+++|+++ |+..+++... ..... .++.
T Consensus 76 ~~~~~~~g~~VLDlGcGtG~~s~~la~~--------------------~~V~gVD~s~-m~~~a~~~~~~~~~~~-~~v~ 133 (276)
T 2wa2_A 76 ERGGVELKGTVVDLGCGRGSWSYYAASQ--------------------PNVREVKAYT-LGTSGHEKPRLVETFG-WNLI 133 (276)
T ss_dssp HTTSCCCCEEEEEESCTTCHHHHHHHTS--------------------TTEEEEEEEC-CCCTTSCCCCCCCCTT-GGGE
T ss_pred HcCCCCCCCEEEEeccCCCHHHHHHHHc--------------------CCEEEEECch-hhhhhhhchhhhhhcC-CCeE
Confidence 3333456789999999999999888775 5799999998 5432221100 00010 2688
Q ss_pred EE--EcccccCCCCCCCeeEEEeccccccccCH----H---HHHHHHHhhccCCc--EEEEEeccCCChH
Q 036563 156 WV--EGDAEALCFEDSTMDGYTIAFGIRNVTHI----E---KALAEAYRVLKRGG--RFLCLELSHVDIP 214 (288)
Q Consensus 156 ~~--~~d~~~~~~~~~~~D~v~~~~~l~~~~~~----~---~~l~~~~~~L~pgG--~l~i~~~~~~~~~ 214 (288)
++ ++|+..++ +++||+|++..+ +...+. . .+|+.+.++|+||| .|++..+. +..+
T Consensus 134 ~~~~~~D~~~l~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~-~~~~ 199 (276)
T 2wa2_A 134 TFKSKVDVTKME--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN-PYSC 199 (276)
T ss_dssp EEECSCCGGGCC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC-CCSH
T ss_pred EEeccCcHhhCC--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC-CCch
Confidence 88 89998765 578999999877 433221 1 37899999999999 99887666 5544
No 233
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.26 E-value=4.2e-11 Score=107.24 Aligned_cols=100 Identities=16% Similarity=0.238 Sum_probs=84.3
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++.. +.. ..+++++|+|+.+++.+++++...++. +++.++.+|+.
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~-------------------~~~V~~vD~s~~ai~~a~~n~~~n~l~-~~v~~~~~D~~ 253 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKN-------------------AKKIYAIDINPHAIELLKKNIKLNKLE-HKIIPILSDVR 253 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTT-------------------SSEEEEEESCHHHHHHHHHHHHHTTCT-TTEEEEESCGG
T ss_pred CCCEEEEccCccCHHHHh-ccC-------------------CCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEECChH
Confidence 578999999999999988 663 379999999999999999999888875 58999999998
Q ss_pred cCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccC
Q 036563 163 ALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 163 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
+.. ++||+|+++.... ...++..+.++|+|||.+++.++..
T Consensus 254 ~~~---~~fD~Vi~dpP~~----~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 254 EVD---VKGNRVIMNLPKF----AHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp GCC---CCEEEEEECCTTT----GGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred Hhc---CCCcEEEECCcHh----HHHHHHHHHHHcCCCCEEEEEEeec
Confidence 765 6899999865322 2378889999999999999876655
No 234
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.25 E-value=3.5e-11 Score=104.05 Aligned_cols=97 Identities=14% Similarity=0.035 Sum_probs=79.0
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc--CCCCCceEEEEcc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER--GYPDKSLLWVEGD 160 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~v~~~~~d 160 (288)
.+.+|||||||+|..+..+++. + .+++++|+++.+++.+++.+... ++..+++++..+|
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~------------------~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D 132 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY------------------D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQL 132 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS------------------S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSG
T ss_pred CCCEEEEEeCCcCHHHHHHHhC------------------C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEech
Confidence 4579999999999999888776 2 79999999999999998775431 1222689999999
Q ss_pred cccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 161 AEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 161 ~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
+.... ++||+|++.. .++..+++.+.+.|+|||.+++.
T Consensus 133 ~~~~~---~~fD~Ii~d~-----~dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 133 LDLDI---KKYDLIFCLQ-----EPDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp GGSCC---CCEEEEEESS-----CCCHHHHHHHHTTEEEEEEEEEE
T ss_pred HHHHH---hhCCEEEECC-----CChHHHHHHHHHhcCCCcEEEEE
Confidence 87654 6899999863 45566999999999999999874
No 235
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.25 E-value=1.6e-10 Score=105.67 Aligned_cols=110 Identities=15% Similarity=0.120 Sum_probs=88.5
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC-CCCceEEEEcc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY-PDKSLLWVEGD 160 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-~~~~v~~~~~d 160 (288)
.++.+|||+|||+|.++..++... ..+++++|+++.+++.+++++...++ . ++++++.+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g------------------~~~V~~vD~s~~al~~a~~n~~~ngl~~-~~v~~~~~D 279 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG------------------CSQVVSVDTSQEALDIARQNVELNKLDL-SKAEFVRDD 279 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT------------------CSEEEEEESCHHHHHHHHHHHHHTTCCG-GGEEEEESC
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC------------------CCEEEEEECCHHHHHHHHHHHHHcCCCc-cceEEEECC
Confidence 357799999999999999998863 26899999999999999999988776 4 479999999
Q ss_pred cccCCC----CCCCeeEEEecccc---------ccccCHHHHHHHHHhhccCCcEEEEEeccC
Q 036563 161 AEALCF----EDSTMDGYTIAFGI---------RNVTHIEKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 161 ~~~~~~----~~~~~D~v~~~~~l---------~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
+.+... ...+||+|+++... ....+...++.++.+.|+|||.+++.....
T Consensus 280 ~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 280 VFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 876521 14579999997543 122456788999999999999999765543
No 236
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.25 E-value=5.1e-11 Score=104.25 Aligned_cols=97 Identities=12% Similarity=-0.001 Sum_probs=71.0
Q ss_pred hcCCCCCCeEEEecC------CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 78 KLNPFPGMKHLDVAG------GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~------G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
.+...++.+|||+|| |+|. ..+++..+ +..+|+++|+++. +
T Consensus 58 ~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~----------------~~~~V~gvDis~~--------v------- 104 (290)
T 2xyq_A 58 TLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLP----------------TGTLLVDSDLNDF--------V------- 104 (290)
T ss_dssp CCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSC----------------TTCEEEEEESSCC--------B-------
T ss_pred hcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcC----------------CCCEEEEEECCCC--------C-------
Confidence 345677889999999 4466 44445442 3589999999997 1
Q ss_pred CceEE-EEcccccCCCCCCCeeEEEecccccc-----------ccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 152 KSLLW-VEGDAEALCFEDSTMDGYTIAFGIRN-----------VTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 152 ~~v~~-~~~d~~~~~~~~~~~D~v~~~~~l~~-----------~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+++.+ +++|+.++++. ++||+|+++...+. ......+++++.++|||||.|++..+
T Consensus 105 ~~v~~~i~gD~~~~~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 105 SDADSTLIGDCATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp CSSSEEEESCGGGCCCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCEEEEECccccCCcc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 36788 99999887654 57999999754221 11135789999999999999997543
No 237
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.25 E-value=2.3e-11 Score=100.21 Aligned_cols=102 Identities=12% Similarity=0.086 Sum_probs=76.4
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
..++.+|||+|||+|.++..+++. . .+|+++|+++.. .. +++.++++|
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~-~------------------~~V~gvD~~~~~-----------~~--~~v~~~~~D 70 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL-A------------------RKIISIDLQEME-----------EI--AGVRFIRCD 70 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT-C------------------SEEEEEESSCCC-----------CC--TTCEEEECC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc-C------------------CcEEEEeccccc-----------cC--CCeEEEEcc
Confidence 356789999999999999998887 2 899999999852 11 579999999
Q ss_pred cccCCC--------C---CCCeeEEEecccccccc----C-------HHHHHHHHHhhccCCcEEEEEeccCCChH
Q 036563 161 AEALCF--------E---DSTMDGYTIAFGIRNVT----H-------IEKALAEAYRVLKRGGRFLCLELSHVDIP 214 (288)
Q Consensus 161 ~~~~~~--------~---~~~~D~v~~~~~l~~~~----~-------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~ 214 (288)
+.+.+. . .++||+|+++....... + ...+++.+.++|+|||.|++..+..+...
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~ 146 (191)
T 3dou_A 71 IFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTN 146 (191)
T ss_dssp TTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHH
T ss_pred ccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHH
Confidence 877531 1 13899999976432211 1 24678899999999999998766655433
No 238
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.24 E-value=3.1e-11 Score=110.11 Aligned_cols=111 Identities=12% Similarity=-0.030 Sum_probs=86.5
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..++... ..+++++|+|+.+++.+++++...++...+++++.+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g------------------a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~ 272 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG------------------AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDV 272 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT------------------BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCH
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC------------------CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCH
Confidence 457799999999999999998753 25899999999999999999988877522899999998
Q ss_pred ccC-C-C--CCCCeeEEEeccccc-----cccC----HHHHHHHHHhhccCCcEEEEEeccC
Q 036563 162 EAL-C-F--EDSTMDGYTIAFGIR-----NVTH----IEKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 162 ~~~-~-~--~~~~~D~v~~~~~l~-----~~~~----~~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
.+. + . ...+||+|++..... ...+ ...++..+.++|+|||.+++.....
T Consensus 273 ~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 273 FDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred HHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 763 2 1 245799999965542 2222 3457788899999999998765544
No 239
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.24 E-value=8.2e-12 Score=108.17 Aligned_cols=114 Identities=12% Similarity=0.054 Sum_probs=78.9
Q ss_pred HHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHh-hhcCCCCCc
Q 036563 75 LVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRA-LERGYPDKS 153 (288)
Q Consensus 75 ~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~-~~~~~~~~~ 153 (288)
+.+.....++.+|||+|||+|.++..+++. .+|+++|+++ |+..+++.. ...... .+
T Consensus 66 i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--------------------~~V~gvD~s~-m~~~a~~~~~~~~~~~-~~ 123 (265)
T 2oxt_A 66 MEERGYVELTGRVVDLGCGRGGWSYYAASR--------------------PHVMDVRAYT-LGVGGHEVPRITESYG-WN 123 (265)
T ss_dssp HHHHTSCCCCEEEEEESCTTSHHHHHHHTS--------------------TTEEEEEEEC-CCCSSCCCCCCCCBTT-GG
T ss_pred HHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--------------------CcEEEEECch-hhhhhhhhhhhhhccC-CC
Confidence 333334456789999999999999888765 5799999998 532221110 000000 16
Q ss_pred eEEE--EcccccCCCCCCCeeEEEeccccccccCH----H---HHHHHHHhhccCCc--EEEEEeccCCChH
Q 036563 154 LLWV--EGDAEALCFEDSTMDGYTIAFGIRNVTHI----E---KALAEAYRVLKRGG--RFLCLELSHVDIP 214 (288)
Q Consensus 154 v~~~--~~d~~~~~~~~~~~D~v~~~~~l~~~~~~----~---~~l~~~~~~L~pgG--~l~i~~~~~~~~~ 214 (288)
+.++ ++|+..++ +++||+|++..+ ++..+. . .+|+.+.++|+||| .|++..+. +..+
T Consensus 124 v~~~~~~~D~~~l~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~-~~~~ 191 (265)
T 2oxt_A 124 IVKFKSRVDIHTLP--VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC-PYSV 191 (265)
T ss_dssp GEEEECSCCTTTSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC-TTSH
T ss_pred eEEEecccCHhHCC--CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC-CCCh
Confidence 8888 89988765 568999999877 443322 1 37899999999999 99987776 5444
No 240
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.24 E-value=2.1e-10 Score=104.73 Aligned_cols=107 Identities=21% Similarity=0.158 Sum_probs=83.4
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..++... +.++++|+|+.+++.+++++...++. ..+..+|+.
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g-------------------a~V~avDis~~al~~a~~n~~~ng~~---~~~~~~D~~ 271 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG-------------------AYALAVDKDLEALGVLDQAALRLGLR---VDIRHGEAL 271 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT-------------------CEEEEEESCHHHHHHHHHHHHHHTCC---CEEEESCHH
T ss_pred CCCeEEEcccchhHHHHHHHHcC-------------------CeEEEEECCHHHHHHHHHHHHHhCCC---CcEEEccHH
Confidence 57899999999999999998863 45999999999999999999888764 346688887
Q ss_pred cC-CCCCCCeeEEEecccccc---------ccCHHHHHHHHHhhccCCcEEEEEeccCC
Q 036563 163 AL-CFEDSTMDGYTIAFGIRN---------VTHIEKALAEAYRVLKRGGRFLCLELSHV 211 (288)
Q Consensus 163 ~~-~~~~~~~D~v~~~~~l~~---------~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 211 (288)
+. +...+.||+|+++..... ..+...++..+.++|+|||.+++...+..
T Consensus 272 ~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 272 PTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp HHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 64 222334999999765311 12345788999999999999997766554
No 241
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.21 E-value=2.5e-10 Score=106.03 Aligned_cols=161 Identities=16% Similarity=0.120 Sum_probs=106.5
Q ss_pred HHHHHHHhHhhHHHhhhhhhhhhh--hhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccc
Q 036563 43 QLVSNVFSSVAKNYDLMNDLMSGG--LHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDD 120 (288)
Q Consensus 43 ~~~~~~~~~~~~~y~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~ 120 (288)
..+..+|+.....+....+...+. ..+...+.+++.+.+.++.+|+|+|||+|.++..+++.......... ...
T Consensus 129 d~~G~~yE~ll~~~~~~~~~~~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~----~~~ 204 (445)
T 2okc_A 129 DVKGAIYESILEKNGQDKKSGAGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKE----KRD 204 (445)
T ss_dssp HHHHHHHHHHHHHHHTCTTTCCGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCH----HHH
T ss_pred hHHHHHHHHHHHHHHhhccccCCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHH----HHH
Confidence 345666666555554221110111 12445567778887777889999999999999998887521000000 000
Q ss_pred cCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccC---------------
Q 036563 121 LQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTH--------------- 185 (288)
Q Consensus 121 ~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~--------------- 185 (288)
......++|+|+++.+++.|+.++...++...++.+.++|....+.. .+||+|+++..+.....
T Consensus 205 ~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~ 283 (445)
T 2okc_A 205 FLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETK 283 (445)
T ss_dssp HHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCS
T ss_pred hhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCc
Confidence 00126799999999999999998877765312677889998765543 38999999987665321
Q ss_pred --HHHHHHHHHhhccCCcEEEEEec
Q 036563 186 --IEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 186 --~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
...+++++.+.|+|||++.++..
T Consensus 284 ~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 284 NNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp CHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred chHHHHHHHHHHHhccCCEEEEEEC
Confidence 13689999999999999987653
No 242
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.21 E-value=6.5e-11 Score=115.66 Aligned_cols=108 Identities=14% Similarity=0.108 Sum_probs=87.4
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..++... ..+++++|+|+.+++.+++++..+++...+++++++|+.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g------------------a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~ 600 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG------------------ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCL 600 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT------------------CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHH
T ss_pred CCCcEEEeeechhHHHHHHHHCC------------------CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHH
Confidence 47799999999999999988753 257999999999999999999888775347999999987
Q ss_pred cC-CCCCCCeeEEEecccc-----------ccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 163 AL-CFEDSTMDGYTIAFGI-----------RNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 163 ~~-~~~~~~~D~v~~~~~l-----------~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+. +...++||+|+++... ....+...++..+.++|+|||.+++...
T Consensus 601 ~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~ 658 (703)
T 3v97_A 601 AWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNN 658 (703)
T ss_dssp HHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 63 3345689999997642 2223456789999999999999996543
No 243
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.21 E-value=6.4e-11 Score=108.40 Aligned_cols=110 Identities=18% Similarity=0.147 Sum_probs=88.8
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..++... ..+++++|+++.+++.+++++...++. +++.++.+|+.
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g------------------~~~v~~vD~s~~~l~~a~~n~~~n~~~-~~v~~~~~d~~ 277 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG------------------ADEVIGIDKSPRAIETAKENAKLNGVE-DRMKFIVGSAF 277 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT------------------CSEEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEESCHH
T ss_pred CCCeEEEecCCCCHHHHHHHHCC------------------CCEEEEEeCCHHHHHHHHHHHHHcCCC-ccceEEECCHH
Confidence 57899999999999999998862 268999999999999999999887764 48999999987
Q ss_pred cCCC----CCCCeeEEEeccccccc---------cCHHHHHHHHHhhccCCcEEEEEeccCC
Q 036563 163 ALCF----EDSTMDGYTIAFGIRNV---------THIEKALAEAYRVLKRGGRFLCLELSHV 211 (288)
Q Consensus 163 ~~~~----~~~~~D~v~~~~~l~~~---------~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 211 (288)
+... ...+||+|+++...... .+...++.++.++|+|||.+++...+..
T Consensus 278 ~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 339 (396)
T 2as0_A 278 EEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQH 339 (396)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCTT
T ss_pred HHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCCC
Confidence 6521 24689999997543221 3456789999999999999998776654
No 244
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.19 E-value=4e-10 Score=104.31 Aligned_cols=111 Identities=13% Similarity=0.162 Sum_probs=86.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
.+.+.+.+.+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.|+++....++
T Consensus 273 ~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~-------------------~~V~gvD~s~~al~~A~~n~~~~~~ 333 (433)
T 1uwv_A 273 KMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQA-------------------ASVVGVEGVPALVEKGQQNARLNGL 333 (433)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTS-------------------SEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhC-------------------CEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 344556666766677899999999999999998873 7999999999999999999988776
Q ss_pred CCCceEEEEcccccC----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 150 PDKSLLWVEGDAEAL----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
. ++.+..+|+.+. ++.+++||+|+++...... ..+++.+.+ ++|++.+++
T Consensus 334 ~--~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyv 387 (433)
T 1uwv_A 334 Q--NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYV 387 (433)
T ss_dssp C--SEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEE
T ss_pred C--ceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEE
Confidence 4 899999998773 3455689999987664433 245555543 688887775
No 245
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.18 E-value=9e-11 Score=106.89 Aligned_cols=108 Identities=20% Similarity=0.188 Sum_probs=87.7
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.+|||+|||+|.++..++... .+++++|+++.+++.+++++...++. ++.++.+|+.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~-------------------~~v~~vD~s~~~~~~a~~n~~~n~~~--~~~~~~~d~~ 267 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF-------------------REVVAVDSSAEALRRAEENARLNGLG--NVRVLEANAF 267 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE-------------------EEEEEEESCHHHHHHHHHHHHHTTCT--TEEEEESCHH
T ss_pred CCCeEEEeeeccCHHHHHHHHhC-------------------CEEEEEECCHHHHHHHHHHHHHcCCC--CceEEECCHH
Confidence 56799999999999999998873 79999999999999999999888775 5999999987
Q ss_pred cCCC----CCCCeeEEEeccccccc---------cCHHHHHHHHHhhccCCcEEEEEeccCC
Q 036563 163 ALCF----EDSTMDGYTIAFGIRNV---------THIEKALAEAYRVLKRGGRFLCLELSHV 211 (288)
Q Consensus 163 ~~~~----~~~~~D~v~~~~~l~~~---------~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 211 (288)
+... ...+||+|++....... .+...++..+.++|+|||.+++...+..
T Consensus 268 ~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 329 (382)
T 1wxx_A 268 DLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCSHH 329 (382)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred HHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 6521 25689999996543221 2346789999999999999998766543
No 246
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.14 E-value=1.6e-10 Score=101.77 Aligned_cols=110 Identities=25% Similarity=0.321 Sum_probs=81.1
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
..+.+.+++.+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....+
T Consensus 28 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~-------------------~~v~~vDi~~~~~~~a~~~~~~~~ 88 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLA-------------------KKVITIDIDSRMISEVKKRCLYEG 88 (299)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTS-------------------SEEEEECSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcC-------------------CEEEEEECCHHHHHHHHHHHHHcC
Confidence 4455667777777788899999999999999988763 799999999999999999887655
Q ss_pred CCCCceEEEEcccccCCCCCCCeeEEEeccccccccCH-HHHH---------------HHHHhhccCCc
Q 036563 149 YPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHI-EKAL---------------AEAYRVLKRGG 201 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~-~~~l---------------~~~~~~L~pgG 201 (288)
+ ++++++.+|+...+++ +||+|+++...+..... ...+ +.+.++++++|
T Consensus 89 ~--~~v~~~~~D~~~~~~~--~~D~Vv~n~py~~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 89 Y--NNLEVYEGDAIKTVFP--KFDVCTANIPYKISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp C--CCEEC----CCSSCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred C--CceEEEECchhhCCcc--cCCEEEEcCCcccccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 5 4799999999877653 79999998765533221 2333 34667888766
No 247
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.13 E-value=3.2e-10 Score=99.51 Aligned_cols=90 Identities=13% Similarity=0.170 Sum_probs=77.5
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
..+.+.+++.+...++.+|||||||+|.++..+++.. .+++++|+++.+++.+++++...
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~-------------------~~V~aVEid~~li~~a~~~~~~~- 95 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNA-------------------KKVYVIEIDKSLEPYANKLKELY- 95 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-------------------SEEEEEESCGGGHHHHHHHHHHC-
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcC-------------------CEEEEEECCHHHHHHHHHHhccC-
Confidence 4556778888888888999999999999999999873 79999999999999999988643
Q ss_pred CCCCceEEEEcccccCCCCCCCeeEEEeccccc
Q 036563 149 YPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIR 181 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~ 181 (288)
++++++.+|+.++++++..||.|+++..++
T Consensus 96 ---~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 96 ---NNIEIIWGDALKVDLNKLDFNKVVANLPYQ 125 (295)
T ss_dssp ---SSEEEEESCTTTSCGGGSCCSEEEEECCGG
T ss_pred ---CCeEEEECchhhCCcccCCccEEEEeCccc
Confidence 589999999998887777899999887654
No 248
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.10 E-value=2.6e-09 Score=90.17 Aligned_cols=102 Identities=15% Similarity=0.035 Sum_probs=82.8
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..+. . ...|+++|+++.+++.+++.....+ .+..+...|.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~------------------~~~y~a~DId~~~i~~ar~~~~~~g---~~~~~~v~D~ 160 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--G------------------IASVWGCDIHQGLGDVITPFAREKD---WDFTFALQDV 160 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--T------------------CSEEEEEESBHHHHHHHHHHHHHTT---CEEEEEECCT
T ss_pred CCCCeEEEecCCccHHHHHhc--c------------------CCeEEEEeCCHHHHHHHHHHHHhcC---CCceEEEeec
Confidence 456799999999999998877 2 3899999999999999999987766 4688999998
Q ss_pred ccCCCCCCCeeEEEeccccccccCH-HHHHHHHHhhccCCcEEEEEe
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHI-EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~-~~~l~~~~~~L~pgG~l~i~~ 207 (288)
...+.+ +++|+|++.-++|++++. ...+-++...|+++|.++-.+
T Consensus 161 ~~~~~~-~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 161 LCAPPA-EAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAVSFP 206 (253)
T ss_dssp TTSCCC-CBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEEEEE
T ss_pred ccCCCC-CCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEEEcC
Confidence 876655 489999999888888643 223338888999999888543
No 249
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.09 E-value=1e-10 Score=103.23 Aligned_cols=104 Identities=14% Similarity=0.060 Sum_probs=72.4
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeC----ChhHHHHHHHHhhhcCCCCCceEE
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDI----NPNMLNVGKKRALERGYPDKSLLW 156 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~----s~~~~~~a~~~~~~~~~~~~~v~~ 156 (288)
..++.+|||+|||+|.++..+++. .+|+++|+ ++.++... .......+++.+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~--------------------~~V~gvD~~~~~~~~~~~~~----~~~~~~~~~v~~ 135 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL--------------------KNVREVKGLTKGGPGHEEPI----PMSTYGWNLVRL 135 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS--------------------TTEEEEEEECCCSTTSCCCC----CCCSTTGGGEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc--------------------CCEEEEeccccCchhHHHHH----HhhhcCCCCeEE
Confidence 456789999999999999888775 46899998 55443211 011111147889
Q ss_pred EEc-ccccCCCCCCCeeEEEeccccc---cccCHH---HHHHHHHhhccCCcEEEEEeccC
Q 036563 157 VEG-DAEALCFEDSTMDGYTIAFGIR---NVTHIE---KALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 157 ~~~-d~~~~~~~~~~~D~v~~~~~l~---~~~~~~---~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
+.+ |+..++ .++||+|+|..+++ +..+.. .+|..+.++|+|||.|++..+..
T Consensus 136 ~~~~D~~~l~--~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 136 QSGVDVFFIP--PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp ECSCCTTTSC--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred EeccccccCC--cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 988 887654 46899999987653 111222 57888999999999998754443
No 250
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.08 E-value=3.7e-09 Score=93.40 Aligned_cols=118 Identities=16% Similarity=0.170 Sum_probs=89.2
Q ss_pred HHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 74 RLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
.+...+...++.+|||+|||+|..+..+++..+ +..+|+++|+++.+++.+++++...++. +
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~----------------~~g~V~a~D~~~~~l~~~~~n~~r~g~~--~ 154 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAALLK----------------NQGKIFAFDLDAKRLASMATLLARAGVS--C 154 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHT----------------TCSEEEEEESCHHHHHHHHHHHHHTTCC--S
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhC----------------CCCEEEEEeCCHHHHHHHHHHHHHcCCC--e
Confidence 344566778889999999999999999999863 3579999999999999999999888774 7
Q ss_pred eEEEEcccccCCCCC---CCeeEEEeccc------ccccc-----------CH-------HHHHHHHHhhccCCcEEEEE
Q 036563 154 LLWVEGDAEALCFED---STMDGYTIAFG------IRNVT-----------HI-------EKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 154 v~~~~~d~~~~~~~~---~~~D~v~~~~~------l~~~~-----------~~-------~~~l~~~~~~L~pgG~l~i~ 206 (288)
+.++.+|+..+.... .+||.|++... +..-+ +. ..+|..+.++++ ||.++..
T Consensus 155 v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYs 233 (309)
T 2b9e_A 155 CELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYS 233 (309)
T ss_dssp EEEEECCGGGSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEE
T ss_pred EEEEeCChHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEE
Confidence 999999988764321 47999998432 21111 11 236777777786 9998877
Q ss_pred eccC
Q 036563 207 ELSH 210 (288)
Q Consensus 207 ~~~~ 210 (288)
.++.
T Consensus 234 TCs~ 237 (309)
T 2b9e_A 234 TCSL 237 (309)
T ss_dssp ESCC
T ss_pred CCCC
Confidence 6664
No 251
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.08 E-value=9.8e-10 Score=93.90 Aligned_cols=89 Identities=7% Similarity=0.175 Sum_probs=71.6
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc
Q 036563 68 HRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER 147 (288)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 147 (288)
+..+.+.+++.+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....
T Consensus 15 d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-------------------~~v~~vD~~~~~~~~a~~~~~~~ 75 (244)
T 1qam_A 15 SKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-------------------NFVTAIEIDHKLCKTTENKLVDH 75 (244)
T ss_dssp CHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-------------------SEEEEECSCHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-------------------CeEEEEECCHHHHHHHHHhhccC
Confidence 34556778888887788899999999999999999874 78999999999999999887542
Q ss_pred CCCCCceEEEEcccccCCCCC-CCeeEEEecccc
Q 036563 148 GYPDKSLLWVEGDAEALCFED-STMDGYTIAFGI 180 (288)
Q Consensus 148 ~~~~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~l 180 (288)
++++++.+|+.++++++ ..| .|+++...
T Consensus 76 ----~~v~~~~~D~~~~~~~~~~~~-~vv~nlPy 104 (244)
T 1qam_A 76 ----DNFQVLNKDILQFKFPKNQSY-KIFGNIPY 104 (244)
T ss_dssp ----CSEEEECCCGGGCCCCSSCCC-EEEEECCG
T ss_pred ----CCeEEEEChHHhCCcccCCCe-EEEEeCCc
Confidence 58999999999887664 345 45555543
No 252
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.06 E-value=7.7e-09 Score=93.41 Aligned_cols=185 Identities=17% Similarity=0.186 Sum_probs=107.6
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC----------CCCc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY----------PDKS 153 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~----------~~~~ 153 (288)
..+|+|+|||+|..+..+....-. ..+..... .+.-+|...++..|.-.+.....-+.+....- ...+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~-~i~~~~~~-~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~ 130 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVK-HISKRFDA-AGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNR 130 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHH-HHHHHHHH-TTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCB
T ss_pred ceEEEecCCCCChhHHHHHHHHHH-HHHHHHhh-cCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCC
Confidence 478999999999999888665421 00000000 11224678999999988887766655543210 0012
Q ss_pred eEEEEccccc---CCCCCCCeeEEEecccccccc--------------------------------------CHHHHHHH
Q 036563 154 LLWVEGDAEA---LCFEDSTMDGYTIAFGIRNVT--------------------------------------HIEKALAE 192 (288)
Q Consensus 154 v~~~~~d~~~---~~~~~~~~D~v~~~~~l~~~~--------------------------------------~~~~~l~~ 192 (288)
..|..+...+ -.+|++++|+|+++.++|++. |...+|+.
T Consensus 131 ~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ 210 (374)
T 3b5i_A 131 SYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRA 210 (374)
T ss_dssp CSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2344443333 357889999999999999986 23346889
Q ss_pred HHhhccCCcEEEEEeccCCChH-----H----H-HHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHH
Q 036563 193 AYRVLKRGGRFLCLELSHVDIP-----V----F-KELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMI 262 (288)
Q Consensus 193 ~~~~L~pgG~l~i~~~~~~~~~-----~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 262 (288)
.++.|+|||.+++.-....+.. . + ..+...+..-+. -| +... +.... .+....+++.+++++++
T Consensus 211 ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~--eG-~i~~--e~~d~-f~~P~y~ps~~E~~~~l 284 (374)
T 3b5i_A 211 RAAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVR--EG-LVAA--EKRDG-FNIPVYAPSLQDFKEVV 284 (374)
T ss_dssp HHHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTS--SS-SSCH--HHHSS-CCCCBCCCCHHHHHHHH
T ss_pred HHHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHH--hC-Ccch--hhccc-CCccccCCCHHHHHHHH
Confidence 9999999999998766554321 0 0 111111110000 00 0000 00000 00012257999999999
Q ss_pred H-HcCCcEEEEEEee
Q 036563 263 S-DAGFQKVEYENLV 276 (288)
Q Consensus 263 ~-~aGf~~v~~~~~~ 276 (288)
+ +.||++..++.+.
T Consensus 285 ~~~~~F~I~~le~~~ 299 (374)
T 3b5i_A 285 DANGSFAIDKLVVYK 299 (374)
T ss_dssp HHHCSEEEEEEEEEE
T ss_pred HhcCCcEEEEEEEEe
Confidence 8 5999998877654
No 253
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.05 E-value=9.4e-10 Score=101.06 Aligned_cols=111 Identities=19% Similarity=0.086 Sum_probs=84.2
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
...+.+++.+...++.+|||+|||+|.++..+++..+ +..+++|+|+++.+++.|
T Consensus 26 ~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~----------------~~~~i~gvDi~~~~~~~a--------- 80 (421)
T 2ih2_A 26 EVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHG----------------TAYRFVGVEIDPKALDLP--------- 80 (421)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHC----------------SCSEEEEEESCTTTCCCC---------
T ss_pred HHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhC----------------CCCeEEEEECCHHHHHhC---------
Confidence 3445666777655567999999999999999998752 247999999999988765
Q ss_pred CCCceEEEEcccccCCCCCCCeeEEEeccccccccC-----------------------------HHHHHHHHHhhccCC
Q 036563 150 PDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTH-----------------------------IEKALAEAYRVLKRG 200 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~-----------------------------~~~~l~~~~~~L~pg 200 (288)
.++.+..+|+.... +.++||+|+++..+..... ...+++.+.++|+||
T Consensus 81 --~~~~~~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~ 157 (421)
T 2ih2_A 81 --PWAEGILADFLLWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPG 157 (421)
T ss_dssp --TTEEEEESCGGGCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEE
T ss_pred --CCCcEEeCChhhcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCC
Confidence 26889999988764 3458999999765432211 125688999999999
Q ss_pred cEEEEEec
Q 036563 201 GRFLCLEL 208 (288)
Q Consensus 201 G~l~i~~~ 208 (288)
|.++++..
T Consensus 158 G~~~~i~p 165 (421)
T 2ih2_A 158 GVLVFVVP 165 (421)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEC
Confidence 99987643
No 254
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.05 E-value=1.9e-09 Score=98.21 Aligned_cols=137 Identities=15% Similarity=0.129 Sum_probs=94.9
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhh-----------hhh-----cc-----cccccCCCceEE
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRR-----------ALQ-----DV-----LEDDLQEETRIY 128 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~-----------~~~-----~~-----~~~~~~~~~~v~ 128 (288)
.....++......++.+|||++||+|.+++.++........+ ..+ .. ..........++
T Consensus 182 ~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 261 (385)
T 3ldu_A 182 TLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIY 261 (385)
T ss_dssp HHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEE
T ss_pred HHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEE
Confidence 345566677777788899999999999999888764210000 000 00 000011236799
Q ss_pred EEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccc----cCHHHHHHHHHhhccC--CcE
Q 036563 129 VCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNV----THIEKALAEAYRVLKR--GGR 202 (288)
Q Consensus 129 ~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~p--gG~ 202 (288)
|+|+++.+++.|++++...++. .++++.++|+.+++.+ ++||+|+++..+..- .+...+.+++.+.|++ |+.
T Consensus 262 GvDid~~ai~~Ar~Na~~~gl~-~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 339 (385)
T 3ldu_A 262 GYDIDEESIDIARENAEIAGVD-EYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWS 339 (385)
T ss_dssp EEESCHHHHHHHHHHHHHHTCG-GGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCE
T ss_pred EEECCHHHHHHHHHHHHHcCCC-CceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCE
Confidence 9999999999999999888775 5799999999887654 489999998886422 2345566667777776 888
Q ss_pred EEEEec
Q 036563 203 FLCLEL 208 (288)
Q Consensus 203 l~i~~~ 208 (288)
+.++..
T Consensus 340 ~~iit~ 345 (385)
T 3ldu_A 340 YYLITS 345 (385)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 776543
No 255
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.04 E-value=3.6e-09 Score=96.59 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=93.8
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhh-----------hh-----hcc-----cccccCCCceEE
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRR-----------AL-----QDV-----LEDDLQEETRIY 128 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~-----------~~-----~~~-----~~~~~~~~~~v~ 128 (288)
.....++......++..|||++||+|.+++.++........+ .. +.. .........+++
T Consensus 188 ~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~ 267 (393)
T 3k0b_A 188 TMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNII 267 (393)
T ss_dssp HHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEE
Confidence 344566777777778899999999999998888764210000 00 000 000011235799
Q ss_pred EEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccc----cCHHHHHHHHHhhccC--CcE
Q 036563 129 VCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNV----THIEKALAEAYRVLKR--GGR 202 (288)
Q Consensus 129 ~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~----~~~~~~l~~~~~~L~p--gG~ 202 (288)
++|+++.|++.|++++...++. .++++.++|+.+++.+ ++||+|+++..+..- .+...+.+.+.+.|++ ||.
T Consensus 268 GvDid~~al~~Ar~Na~~~gl~-~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~ 345 (393)
T 3k0b_A 268 GGDIDARLIEIAKQNAVEAGLG-DLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWS 345 (393)
T ss_dssp EEESCHHHHHHHHHHHHHTTCT-TCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCE
T ss_pred EEECCHHHHHHHHHHHHHcCCC-CceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCE
Confidence 9999999999999999988876 5799999999988654 489999999775321 1234456666666665 888
Q ss_pred EEEEec
Q 036563 203 FLCLEL 208 (288)
Q Consensus 203 l~i~~~ 208 (288)
++++..
T Consensus 346 ~~iit~ 351 (393)
T 3k0b_A 346 VYVLTS 351 (393)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 877543
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.04 E-value=3.7e-09 Score=96.09 Aligned_cols=137 Identities=12% Similarity=0.049 Sum_probs=95.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhh-----------hhh-----c-----ccccccCCCceEE
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRR-----------ALQ-----D-----VLEDDLQEETRIY 128 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~-----------~~~-----~-----~~~~~~~~~~~v~ 128 (288)
.....++......++..+||++||+|.+++.++........+ ..+ . ..........+++
T Consensus 181 ~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~ 260 (384)
T 3ldg_A 181 NMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDIS 260 (384)
T ss_dssp HHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEE
T ss_pred HHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEE
Confidence 444566677777778899999999999998888764210000 000 0 0000011235799
Q ss_pred EEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEecccccc-c---cCHHHHHHHHHhhccC--CcE
Q 036563 129 VCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRN-V---THIEKALAEAYRVLKR--GGR 202 (288)
Q Consensus 129 ~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~-~---~~~~~~l~~~~~~L~p--gG~ 202 (288)
++|+++.|++.|++++...++. ..+++.++|+.+++.+ ++||+|+++..+.. + .+...+.+.+.+.|++ ||.
T Consensus 261 GvDid~~al~~Ar~Na~~~gl~-~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~ 338 (384)
T 3ldg_A 261 GFDFDGRMVEIARKNAREVGLE-DVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWS 338 (384)
T ss_dssp EEESCHHHHHHHHHHHHHTTCT-TTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSE
T ss_pred EEECCHHHHHHHHHHHHHcCCC-CceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcE
Confidence 9999999999999999988886 5799999999988654 48999999977542 2 2345566667777776 888
Q ss_pred EEEEec
Q 036563 203 FLCLEL 208 (288)
Q Consensus 203 l~i~~~ 208 (288)
+.++..
T Consensus 339 ~~iit~ 344 (384)
T 3ldg_A 339 QFILTN 344 (384)
T ss_dssp EEEEES
T ss_pred EEEEEC
Confidence 887543
No 257
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.97 E-value=7e-09 Score=95.58 Aligned_cols=98 Identities=11% Similarity=0.075 Sum_probs=77.3
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....++ . +.+..+|+
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~-------------------~~V~gvD~s~~ai~~A~~n~~~ngl--~-v~~~~~d~ 346 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRG-------------------FNVKGFDSNEFAIEMARRNVEINNV--D-AEFEVASD 346 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTT-------------------CEEEEEESCHHHHHHHHHHHHHHTC--C-EEEEECCT
T ss_pred CCCCEEEEeeccchHHHHHHHHcC-------------------CEEEEEECCHHHHHHHHHHHHHcCC--c-EEEEECCh
Confidence 456799999999999999998763 7999999999999999999887765 3 89999999
Q ss_pred ccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
.+... .+||+|+++..-... ...+++.+. .|+|+|.+++.
T Consensus 347 ~~~~~--~~fD~Vv~dPPr~g~--~~~~~~~l~-~l~p~givyvs 386 (425)
T 2jjq_A 347 REVSV--KGFDTVIVDPPRAGL--HPRLVKRLN-REKPGVIVYVS 386 (425)
T ss_dssp TTCCC--TTCSEEEECCCTTCS--CHHHHHHHH-HHCCSEEEEEE
T ss_pred HHcCc--cCCCEEEEcCCccch--HHHHHHHHH-hcCCCcEEEEE
Confidence 87642 279999997653322 133555554 48999998863
No 258
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.97 E-value=1.8e-09 Score=92.78 Aligned_cols=88 Identities=14% Similarity=0.242 Sum_probs=72.3
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
..+.+.+++.+...++.+|||||||+|.++..+++.. .+++++|+++.|++.++++....
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-------------------~~V~avEid~~~~~~~~~~~~~~- 74 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-------------------DNLALVEIDRDLVAFLQKKYNQQ- 74 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-------------------SEEEEEECCHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-------------------CEEEEEECCHHHHHHHHHHHhhC-
Confidence 4556778888888888999999999999999998873 79999999999999999987652
Q ss_pred CCCCceEEEEcccccCCCCC----CCeeEEEecccc
Q 036563 149 YPDKSLLWVEGDAEALCFED----STMDGYTIAFGI 180 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~----~~~D~v~~~~~l 180 (288)
++++++.+|+.++++++ ++|| |+++...
T Consensus 75 ---~~v~~i~~D~~~~~~~~~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 75 ---KNITIYQNDALQFDFSSVKTDKPLR-VVGNLPY 106 (255)
T ss_dssp ---TTEEEEESCTTTCCGGGSCCSSCEE-EEEECCH
T ss_pred ---CCcEEEEcchHhCCHHHhccCCCeE-EEecCCc
Confidence 58999999998876542 4688 6666554
No 259
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.97 E-value=2.7e-09 Score=92.48 Aligned_cols=90 Identities=16% Similarity=0.153 Sum_probs=75.5
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc
Q 036563 68 HRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER 147 (288)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 147 (288)
+..+.+.+++.+...++ +|||||||+|.++..+++.. .+++++|+++.|++.++++...
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-------------------~~V~avEid~~~~~~l~~~~~~- 90 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-------------------AEVTAIEKDLRLRPVLEETLSG- 90 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-------------------CCEEEEESCGGGHHHHHHHTTT-
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-------------------CEEEEEECCHHHHHHHHHhcCC-
Confidence 45566788888888888 99999999999999999874 7899999999999999988752
Q ss_pred CCCCCceEEEEcccccCCCCCC-CeeEEEecccccc
Q 036563 148 GYPDKSLLWVEGDAEALCFEDS-TMDGYTIAFGIRN 182 (288)
Q Consensus 148 ~~~~~~v~~~~~d~~~~~~~~~-~~D~v~~~~~l~~ 182 (288)
.+++++.+|+.++++++. .+|.|+++...+.
T Consensus 91 ----~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~i 122 (271)
T 3fut_A 91 ----LPVRLVFQDALLYPWEEVPQGSLLVANLPYHI 122 (271)
T ss_dssp ----SSEEEEESCGGGSCGGGSCTTEEEEEEECSSC
T ss_pred ----CCEEEEECChhhCChhhccCccEEEecCcccc
Confidence 479999999988876542 6899988877544
No 260
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.96 E-value=7.3e-11 Score=100.91 Aligned_cols=111 Identities=9% Similarity=0.109 Sum_probs=83.4
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP 150 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~ 150 (288)
+.+.+++.+...++.+|||+|||+|.++..+++.. .+++++|+++.+++.++++....
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-------------------~~v~~id~~~~~~~~a~~~~~~~--- 74 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-------------------KQVTSIELDSHLFNLSSEKLKLN--- 74 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-------------------SEEEESSSSCSSSSSSSCTTTTC---
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-------------------CeEEEEECCHHHHHHHHHHhccC---
Confidence 34566777777778899999999999999998873 78999999999998887765421
Q ss_pred CCceEEEEcccccCCCCC-CCeeEEEeccccccc-----------cCHHHHH----HHHHhhccCCcEEEE
Q 036563 151 DKSLLWVEGDAEALCFED-STMDGYTIAFGIRNV-----------THIEKAL----AEAYRVLKRGGRFLC 205 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~-~~~D~v~~~~~l~~~-----------~~~~~~l----~~~~~~L~pgG~l~i 205 (288)
++++++.+|+.+++++. ++| .|+++...+.. ......+ +.+.++|+|||.+.+
T Consensus 75 -~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 75 -TRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp -SEEEECCSCCTTTTCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred -CceEEEECChhhcCcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 58999999999887663 578 67776543321 1122233 668999999998765
No 261
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.93 E-value=4.9e-09 Score=99.51 Aligned_cols=136 Identities=14% Similarity=0.038 Sum_probs=93.8
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhh--hhcccccccCCCceEEEEeCChhHHHHHHHHhhhc
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRA--LQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER 147 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 147 (288)
...+.|++.+.+.++.+|+|.|||+|.++..+++.+....... +..... .......++|+|+++.++..|+.++...
T Consensus 156 ~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~-~~~~~~~i~GiEid~~~~~lA~~nl~l~ 234 (541)
T 2ar0_A 156 PLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQ-DFQIHRAFIGLELVPGTRRLALMNCLLH 234 (541)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHH-HHHHHTSEEEEESCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHH-hhhhcceEEEEcCCHHHHHHHHHHHHHh
Confidence 3445677777777788999999999999999888753110000 000000 0000247999999999999999988766
Q ss_pred CCCCC----ceEEEEcccccCC-CCCCCeeEEEeccccccccC--------------HHHHHHHHHhhccCCcEEEEEe
Q 036563 148 GYPDK----SLLWVEGDAEALC-FEDSTMDGYTIAFGIRNVTH--------------IEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 148 ~~~~~----~v~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~~~--------------~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+.. . ++.+..+|....+ ....+||+|+++..+..... ...++.++.+.|+|||++.++.
T Consensus 235 gi~-~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 235 DIE-GNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp TCC-CBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCC-ccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 654 2 2778888875432 33467999999987654322 2368999999999999988764
No 262
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.92 E-value=5e-09 Score=94.92 Aligned_cols=112 Identities=9% Similarity=0.090 Sum_probs=83.4
Q ss_pred HHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC
Q 036563 70 LWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY 149 (288)
Q Consensus 70 ~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~ 149 (288)
...+.+.+.+... +.+|||+|||+|.++..+++.. .+|+++|+++.+++.+++++...++
T Consensus 201 ~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~-------------------~~V~gvd~~~~ai~~a~~n~~~ng~ 260 (369)
T 3bt7_A 201 QMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNF-------------------DRVLATEIAKPSVAAAQYNIAANHI 260 (369)
T ss_dssp HHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGS-------------------SEEEEECCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcC-------------------CEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3344555555543 5689999999999999887753 6899999999999999999988877
Q ss_pred CCCceEEEEcccccCC--CCC--------------CCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 150 PDKSLLWVEGDAEALC--FED--------------STMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~--~~~--------------~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
.+++++.+|+.+.. +.. .+||+|++...-.. +..++.+.|+++|.++++++.
T Consensus 261 --~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g------~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 261 --DNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSG------LDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp --CSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTC------CCHHHHHHHTTSSEEEEEESC
T ss_pred --CceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCccc------cHHHHHHHHhCCCEEEEEECC
Confidence 38999999987641 111 37999997654322 234566677799999877654
No 263
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.92 E-value=1.6e-08 Score=91.44 Aligned_cols=175 Identities=15% Similarity=0.165 Sum_probs=102.8
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhccccc-------ccCCCceEEEEeCChhHHHHHHHHhh--------hcC
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLED-------DLQEETRIYVCDINPNMLNVGKKRAL--------ERG 148 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~v~~~D~s~~~~~~a~~~~~--------~~~ 148 (288)
..+|+|+||++|..+..+....- +.+... .-+|...++..|.-.+.....-+.+. ..+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii-------~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g 125 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIV-------QSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG 125 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHH-------HHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEEEecCCCCCchHHHHHHHHH-------HHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc
Confidence 47899999999999988877631 111111 11356789999986333322211111 111
Q ss_pred CCCCceEEEEcccccC---CCCCCCeeEEEeccccccccCHH--------------------------------------
Q 036563 149 YPDKSLLWVEGDAEAL---CFEDSTMDGYTIAFGIRNVTHIE-------------------------------------- 187 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~---~~~~~~~D~v~~~~~l~~~~~~~-------------------------------------- 187 (288)
-. .+..|+.+...++ .++++++|+|+++.++|++.+..
T Consensus 126 ~~-~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~ 204 (384)
T 2efj_A 126 RK-IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDF 204 (384)
T ss_dssp CC-TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHH
T ss_pred CC-CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHH
Confidence 11 2346666665554 58899999999999999975431
Q ss_pred -HHHHHHHhhccCCcEEEEEeccCCCh--H-----HHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHH
Q 036563 188 -KALAEAYRVLKRGGRFLCLELSHVDI--P-----VFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFA 259 (288)
Q Consensus 188 -~~l~~~~~~L~pgG~l~i~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (288)
.+|+..++.|+|||.+++.-...... . .+.......... | ++.. +.... ......+++.++++
T Consensus 205 ~~FL~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~e-----G-li~~--ek~ds-f~~P~y~ps~~E~~ 275 (384)
T 2efj_A 205 TTFLRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIE-----G-HLEE--EKLDS-FNVPIYAPSTEEVK 275 (384)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHH-----T-SSCH--HHHHT-CCCSBCCCCHHHHH
T ss_pred HHHHHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHh-----C-Ccch--hhhcc-cCCcccCCCHHHHH
Confidence 12667799999999999876666543 2 333332221100 0 0000 00000 00012367999999
Q ss_pred HHHHHcC-CcEEEEEEe
Q 036563 260 AMISDAG-FQKVEYENL 275 (288)
Q Consensus 260 ~~l~~aG-f~~v~~~~~ 275 (288)
.+++++| |++..++.+
T Consensus 276 ~~le~~g~F~i~~le~~ 292 (384)
T 2efj_A 276 RIVEEEGSFEILYLETF 292 (384)
T ss_dssp HHHHHHCSEEEEEEEEE
T ss_pred HHHHHcCCceEEEEEEE
Confidence 9999985 888777654
No 264
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.91 E-value=8.3e-09 Score=92.33 Aligned_cols=110 Identities=15% Similarity=0.152 Sum_probs=81.0
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC---CCC---CceEE
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG---YPD---KSLLW 156 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~---~~~---~~v~~ 156 (288)
.+.+||+||||+|..+..++++. ..+++++|+++.+++.+++.+...+ +.+ +++++
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~------------------~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~v 249 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK------------------PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQV 249 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC------------------CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEE
T ss_pred CCCEEEEEECChhHHHHHHHHCC------------------CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEE
Confidence 46799999999999999988873 3789999999999999999875432 221 27999
Q ss_pred EEcccccCCC----CCCCeeEEEecccc-cc--cc---CHHHHHHHH----HhhccCCcEEEEEeccC
Q 036563 157 VEGDAEALCF----EDSTMDGYTIAFGI-RN--VT---HIEKALAEA----YRVLKRGGRFLCLELSH 210 (288)
Q Consensus 157 ~~~d~~~~~~----~~~~~D~v~~~~~l-~~--~~---~~~~~l~~~----~~~L~pgG~l~i~~~~~ 210 (288)
+.+|+...-. ..++||+|++...- .. .+ -...+++.+ .++|+|||.+++...+.
T Consensus 250 i~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s~ 317 (364)
T 2qfm_A 250 LIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNCV 317 (364)
T ss_dssp EESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEET
T ss_pred EECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCCc
Confidence 9999876521 35689999987642 11 11 124566666 89999999999754433
No 265
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.85 E-value=9.3e-09 Score=93.53 Aligned_cols=104 Identities=16% Similarity=0.072 Sum_probs=83.4
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc-eEEEEcc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS-LLWVEGD 160 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~-v~~~~~d 160 (288)
.++.+|||++||+|.++..++.... ...+|+++|+++.+++.+++++..+++. ++ ++++.+|
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~----------------ga~~V~avDi~~~av~~~~~N~~~Ngl~-~~~v~v~~~D 113 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETS----------------CVEKAYANDISSKAIEIMKENFKLNNIP-EDRYEIHGME 113 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCS----------------CEEEEEEECSCHHHHHHHHHHHHHTTCC-GGGEEEECSC
T ss_pred CCCCEEEECCCcccHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHHHHHHHhCCC-CceEEEEeCC
Confidence 3567999999999999999998741 1268999999999999999999988875 44 9999999
Q ss_pred cccCC--CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 161 AEALC--FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 161 ~~~~~--~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
+..+. ...+.||+|++.. . .....++..+.+.|++||.+++.
T Consensus 114 a~~~l~~~~~~~fD~V~lDP-~---g~~~~~l~~a~~~Lk~gGll~~t 157 (392)
T 3axs_A 114 ANFFLRKEWGFGFDYVDLDP-F---GTPVPFIESVALSMKRGGILSLT 157 (392)
T ss_dssp HHHHHHSCCSSCEEEEEECC-S---SCCHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHhhCCCCcEEEECC-C---cCHHHHHHHHHHHhCCCCEEEEE
Confidence 86542 2245799999876 1 22356889999999999977754
No 266
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.85 E-value=7.2e-09 Score=91.15 Aligned_cols=87 Identities=18% Similarity=0.256 Sum_probs=71.9
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+++.+...++.+|||+|||+|..+..+++.. +..+++++|+++.|++.+++++...+ .
T Consensus 16 ~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~-----------------~~~~VigvD~d~~al~~A~~~~~~~g---~ 75 (301)
T 1m6y_A 16 REVIEFLKPEDEKIILDCTVGEGGHSRAILEHC-----------------PGCRIIGIDVDSEVLRIAEEKLKEFS---D 75 (301)
T ss_dssp HHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHC-----------------TTCEEEEEESCHHHHHHHHHHTGGGT---T
T ss_pred HHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHC-----------------CCCEEEEEECCHHHHHHHHHHHHhcC---C
Confidence 456677777788899999999999999999986 35899999999999999999987765 4
Q ss_pred ceEEEEcccccCC--CC---CCCeeEEEeccc
Q 036563 153 SLLWVEGDAEALC--FE---DSTMDGYTIAFG 179 (288)
Q Consensus 153 ~v~~~~~d~~~~~--~~---~~~~D~v~~~~~ 179 (288)
++.++++|+..++ +. ..+||.|++...
T Consensus 76 ~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D~g 107 (301)
T 1m6y_A 76 RVSLFKVSYREADFLLKTLGIEKVDGILMDLG 107 (301)
T ss_dssp TEEEEECCGGGHHHHHHHTTCSCEEEEEEECS
T ss_pred cEEEEECCHHHHHHHHHhcCCCCCCEEEEcCc
Confidence 8999999988764 11 157999998664
No 267
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.84 E-value=2e-08 Score=95.28 Aligned_cols=135 Identities=14% Similarity=0.065 Sum_probs=91.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
+...+.|++.+.+.++ +|+|.+||+|.+...+++.+.......- ...........++|+|+++.++..|+.++...+
T Consensus 231 ~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~--~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 307 (544)
T 3khk_A 231 KSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKH--YNASEQKKQISVYGQESNPTTWKLAAMNMVIRG 307 (544)
T ss_dssp HHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHT--SCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccc--cchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC
Confidence 3455677777776655 9999999999999888766421110000 000000013689999999999999999988777
Q ss_pred CCCCceEEEEcccccCC-CCCCCeeEEEeccccccc-------------------------c----CHHHHHHHHHhhcc
Q 036563 149 YPDKSLLWVEGDAEALC-FEDSTMDGYTIAFGIRNV-------------------------T----HIEKALAEAYRVLK 198 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~-------------------------~----~~~~~l~~~~~~L~ 198 (288)
+. .++.+.++|....+ +...+||+|+++..+..- + ....++.++.+.|+
T Consensus 308 i~-~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk 386 (544)
T 3khk_A 308 ID-FNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLA 386 (544)
T ss_dssp CC-CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEE
T ss_pred CC-cccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhc
Confidence 65 44444777765433 445789999998876531 1 01258999999999
Q ss_pred CCcEEEEEe
Q 036563 199 RGGRFLCLE 207 (288)
Q Consensus 199 pgG~l~i~~ 207 (288)
|||++.++-
T Consensus 387 ~gGr~aiVl 395 (544)
T 3khk_A 387 PTGSMALLL 395 (544)
T ss_dssp EEEEEEEEE
T ss_pred cCceEEEEe
Confidence 999988653
No 268
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.84 E-value=9.8e-09 Score=93.16 Aligned_cols=101 Identities=18% Similarity=0.151 Sum_probs=81.3
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc---------------
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER--------------- 147 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--------------- 147 (288)
++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++++...
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~-----------------~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~ 109 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALET-----------------PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILK 109 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHS-----------------SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEE
T ss_pred CCCEEEECCCchhHHHHHHHHhC-----------------CCCeEEEEECCHHHHHHHHHHHHHhccccccccccccccc
Confidence 46799999999999999999986 2468999999999999999999877
Q ss_pred CCCCCceEEEEcccccCC-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 148 GYPDKSLLWVEGDAEALC-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 148 ~~~~~~v~~~~~d~~~~~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
++. ++++..+|+..+. ...+.||+|++.. . -....++..+.+.|++||.+++.
T Consensus 110 gl~--~i~v~~~Da~~~~~~~~~~fD~I~lDP-~---~~~~~~l~~a~~~lk~gG~l~vt 163 (378)
T 2dul_A 110 GEK--TIVINHDDANRLMAERHRYFHFIDLDP-F---GSPMEFLDTALRSAKRRGILGVT 163 (378)
T ss_dssp SSS--EEEEEESCHHHHHHHSTTCEEEEEECC-S---SCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CCC--ceEEEcCcHHHHHHhccCCCCEEEeCC-C---CCHHHHHHHHHHhcCCCCEEEEE
Confidence 653 4999999987652 1135799999654 2 12467889999999999987754
No 269
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.83 E-value=1.1e-07 Score=92.77 Aligned_cols=133 Identities=11% Similarity=0.049 Sum_probs=91.4
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhccccc-----------------------------
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLED----------------------------- 119 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~----------------------------- 119 (288)
+.....++......++..|||++||+|.+++.++........ |..+.
T Consensus 176 e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~ap----G~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~ 251 (703)
T 3v97_A 176 ETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAP----GLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKG 251 (703)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCT----TTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCC----CCCccccchhhcccCCHHHHHHHHHHHHHHhhhc
Confidence 344566777777777889999999999999888776310000 00000
Q ss_pred ccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCC--CCCeeEEEeccccccc----cCHHHHH---
Q 036563 120 DLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFE--DSTMDGYTIAFGIRNV----THIEKAL--- 190 (288)
Q Consensus 120 ~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~D~v~~~~~l~~~----~~~~~~l--- 190 (288)
...+...++|+|+++.+++.|++++...++. ..+.+.++|+.++..+ .++||+|+++..+..- .+...+.
T Consensus 252 ~~~~~~~i~G~Did~~av~~A~~N~~~agv~-~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l 330 (703)
T 3v97_A 252 LAEYSSHFYGSDSDARVIQRARTNARLAGIG-ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLL 330 (703)
T ss_dssp HHHCCCCEEEEESCHHHHHHHHHHHHHTTCG-GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHH
T ss_pred cccCCccEEEEECCHHHHHHHHHHHHHcCCC-CceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHH
Confidence 0012368999999999999999999998886 5699999999887433 3379999999775321 1233344
Q ss_pred HHHHhhccCCcEEEEE
Q 036563 191 AEAYRVLKRGGRFLCL 206 (288)
Q Consensus 191 ~~~~~~L~pgG~l~i~ 206 (288)
.++.+.+.|||.+.++
T Consensus 331 ~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 331 GRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHCTTCEEEEE
T ss_pred HHHHHhhCCCCeEEEE
Confidence 4444555589998875
No 270
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.81 E-value=4.6e-08 Score=93.69 Aligned_cols=105 Identities=14% Similarity=0.112 Sum_probs=77.9
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
...|||+|||+|.+....++.... +. ...+|+++|.|+ +...+++....+++. ++|+++.+|+++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~-~~------------~~vkVyAVEknp-~A~~a~~~v~~N~~~-dkVtVI~gd~ee 422 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQ-AD------------RRIKLYAVEKNP-NAVVTLENWQFEEWG-SQVTVVSSDMRE 422 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHH-TT------------CEEEEEEEESCH-HHHHHHHHHHHHTTG-GGEEEEESCTTT
T ss_pred CcEEEEECCCCcHHHHHHHHHHHh-cC------------CCcEEEEEECCH-HHHHHHHHHHhccCC-CeEEEEeCccee
Confidence 457999999999996666665421 00 123789999987 566788888888887 889999999999
Q ss_pred CCCCCCCeeEEEeccc--cccccCHHHHHHHHHhhccCCcEEE
Q 036563 164 LCFEDSTMDGYTIAFG--IRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 164 ~~~~~~~~D~v~~~~~--l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
+..| +++|+|++=.. +-.-+.....|....+.|||||.++
T Consensus 423 v~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 423 WVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred ccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 8766 58999997322 1111234567888899999999876
No 271
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.79 E-value=2e-08 Score=87.37 Aligned_cols=90 Identities=13% Similarity=0.187 Sum_probs=69.7
Q ss_pred hHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCC-CceEEEEeCChhHHHHHHHHhhh
Q 036563 68 HRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQE-ETRIYVCDINPNMLNVGKKRALE 146 (288)
Q Consensus 68 ~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~D~s~~~~~~a~~~~~~ 146 (288)
+..+.+.+++.+...++.+|||||||+|.++..+++... . ..+++++|+++.|++.++++.
T Consensus 27 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~----------------~~~~~V~avDid~~~l~~a~~~~-- 88 (279)
T 3uzu_A 27 DHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLA----------------TPGSPLHAVELDRDLIGRLEQRF-- 88 (279)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHC----------------BTTBCEEEEECCHHHHHHHHHHH--
T ss_pred CHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCC----------------CcCCeEEEEECCHHHHHHHHHhc--
Confidence 345567788888888889999999999999999998862 1 134999999999999999883
Q ss_pred cCCCCCceEEEEcccccCCCCCC------CeeEEEeccc
Q 036563 147 RGYPDKSLLWVEGDAEALCFEDS------TMDGYTIAFG 179 (288)
Q Consensus 147 ~~~~~~~v~~~~~d~~~~~~~~~------~~D~v~~~~~ 179 (288)
. .+++++.+|+.++++++- ..+.|++|..
T Consensus 89 ~----~~v~~i~~D~~~~~~~~~~~~~~~~~~~vv~NlP 123 (279)
T 3uzu_A 89 G----ELLELHAGDALTFDFGSIARPGDEPSLRIIGNLP 123 (279)
T ss_dssp G----GGEEEEESCGGGCCGGGGSCSSSSCCEEEEEECC
T ss_pred C----CCcEEEECChhcCChhHhcccccCCceEEEEccC
Confidence 2 589999999998865431 2345666554
No 272
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.79 E-value=4.3e-08 Score=87.93 Aligned_cols=178 Identities=15% Similarity=0.143 Sum_probs=108.5
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccc-----cc-cCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEE
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLE-----DD-LQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLW 156 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~-----~~-~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~ 156 (288)
...+|+|+||++|..+..+....= +.+.. +. .+|...++..|.-.++.....+.+.... ...+..|
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii-------~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~-~~~~~~f 122 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELI-------KTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN-DVDGVCF 122 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTH-------HHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC-SCTTCEE
T ss_pred CceEEEecCCCCCcchHHHHHHHH-------HHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc-ccCCCEE
Confidence 346899999999987766655420 00100 11 2467889999999999988887765421 1013455
Q ss_pred EEccccc---CCCCCCCeeEEEeccccccccCH---------------------------------HHHHHHHHhhccCC
Q 036563 157 VEGDAEA---LCFEDSTMDGYTIAFGIRNVTHI---------------------------------EKALAEAYRVLKRG 200 (288)
Q Consensus 157 ~~~d~~~---~~~~~~~~D~v~~~~~l~~~~~~---------------------------------~~~l~~~~~~L~pg 200 (288)
..+...+ -.++++++|+|+++.++|++.+. ..+|+..++.|+||
T Consensus 123 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pG 202 (359)
T 1m6e_X 123 INGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPG 202 (359)
T ss_dssp EEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTT
T ss_pred EEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 5555444 36889999999999999987542 23488999999999
Q ss_pred cEEEEEeccCCChH--------HHHHHHHHhhccccccccccccC-CCcchhhhHHHHhcCCChHHHHHHHHHcCC-cEE
Q 036563 201 GRFLCLELSHVDIP--------VFKELYDYYSFSVIPAIGELVAG-DRGSYQYLVESVRRFPPQEKFAAMISDAGF-QKV 270 (288)
Q Consensus 201 G~l~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf-~~v 270 (288)
|.+++.-....+.. .+..+...+..-+. -| ++.. .-+.+ .....+++.++++.+++++|. ++.
T Consensus 203 G~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~--eG-li~~ek~d~f----~~P~y~ps~~E~~~~ie~~G~F~i~ 275 (359)
T 1m6e_X 203 GRMVLTILGRRSEDRASTECCLIWQLLAMALNQMVS--EG-LIEEEKMDKF----NIPQYTPSPTEVEAEILKEGSFLID 275 (359)
T ss_dssp CEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHH--TT-CSCCSTTGGG----CCCCBCCCSHHHHHHHHHTTTBCCE
T ss_pred ceEEEEEecCCCCCccccchHHHHHHHHHHHHHHHH--cc-ccchhhhhcc----CCCccCCCHHHHHHHHHHcCCceEE
Confidence 99998766554321 12222222210000 01 1000 00000 011236789999999999954 776
Q ss_pred EEEEe
Q 036563 271 EYENL 275 (288)
Q Consensus 271 ~~~~~ 275 (288)
..+.+
T Consensus 276 ~~e~~ 280 (359)
T 1m6e_X 276 HIEAS 280 (359)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66543
No 273
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.75 E-value=7e-08 Score=91.43 Aligned_cols=124 Identities=14% Similarity=0.108 Sum_probs=91.3
Q ss_pred HHHHHHHhhcC----CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhh
Q 036563 70 LWKDRLVSKLN----PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRAL 145 (288)
Q Consensus 70 ~~~~~~~~~l~----~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~ 145 (288)
...+.|++.+. +.++.+|+|.+||+|.+...+++.+.. .....++|+|+++.+...|+.++.
T Consensus 204 ~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~--------------~~~~~i~G~Eid~~~~~lA~~Nl~ 269 (542)
T 3lkd_A 204 PVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQ--------------PQTVVYFGQELNTSTYNLARMNMI 269 (542)
T ss_dssp HHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSC--------------TTTCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHh--------------ccCceEEEEECcHHHHHHHHHHHH
Confidence 34455666554 456789999999999999888887520 024789999999999999999887
Q ss_pred hcCCCCCceEEEEcccccC--C-CCCCCeeEEEecccccccc--------C---------------HHHHHHHHHhhcc-
Q 036563 146 ERGYPDKSLLWVEGDAEAL--C-FEDSTMDGYTIAFGIRNVT--------H---------------IEKALAEAYRVLK- 198 (288)
Q Consensus 146 ~~~~~~~~v~~~~~d~~~~--~-~~~~~~D~v~~~~~l~~~~--------~---------------~~~~l~~~~~~L~- 198 (288)
-.+....++.+..+|.... + ....+||+|+++..+..-. + -..++.++.+.|+
T Consensus 270 l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~ 349 (542)
T 3lkd_A 270 LHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQ 349 (542)
T ss_dssp HTTCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCT
T ss_pred HcCCCcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCC
Confidence 7766423678899997655 2 3456899999986643110 0 1247999999999
Q ss_pred CCcEEEEEe
Q 036563 199 RGGRFLCLE 207 (288)
Q Consensus 199 pgG~l~i~~ 207 (288)
|||++.++-
T Consensus 350 ~gGr~a~Vl 358 (542)
T 3lkd_A 350 DNGVMAIVL 358 (542)
T ss_dssp TTCEEEEEE
T ss_pred CceeEEEEe
Confidence 999988654
No 274
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.75 E-value=4.9e-08 Score=83.56 Aligned_cols=88 Identities=19% Similarity=0.197 Sum_probs=68.3
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
..+.+.+++.+...++.+|||+|||+|.++..+++.. ..+++++|+++.+++.++++ . .
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~------------------~~~v~avEid~~~~~~~~~~-~-~- 75 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHP------------------LKKLYVIELDREMVENLKSI-G-D- 75 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSC------------------CSEEEEECCCHHHHHHHTTS-C-C-
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcC------------------CCeEEEEECCHHHHHHHHhc-c-C-
Confidence 4566778888888888899999999999999998862 37999999999999999876 2 1
Q ss_pred CCCCceEEEEcccccCCCCCCC-eeEEEecccc
Q 036563 149 YPDKSLLWVEGDAEALCFEDST-MDGYTIAFGI 180 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~~~-~D~v~~~~~l 180 (288)
.+++++.+|+.++++++.. ...|+++...
T Consensus 76 ---~~v~~i~~D~~~~~~~~~~~~~~vv~NlPy 105 (249)
T 3ftd_A 76 ---ERLEVINEDASKFPFCSLGKELKVVGNLPY 105 (249)
T ss_dssp ---TTEEEECSCTTTCCGGGSCSSEEEEEECCT
T ss_pred ---CCeEEEEcchhhCChhHccCCcEEEEECch
Confidence 5899999999888765421 2255555543
No 275
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.75 E-value=8.1e-08 Score=82.52 Aligned_cols=114 Identities=12% Similarity=0.120 Sum_probs=71.9
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCC-----CceEEEEeCCh---hHHH-----------HHHH
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQE-----ETRIYVCDINP---NMLN-----------VGKK 142 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~D~s~---~~~~-----------~a~~ 142 (288)
.+..+|||+|+|+|..+..+++..... .... | ..+++++|..+ +++. .+++
T Consensus 59 ~~~~~ILEiGfGtG~n~l~~~~~~~~~---------~~~~-p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~ 128 (257)
T 2qy6_A 59 HPLFVVAESGFGTGLNFLTLWQAFDQF---------REAH-PQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQ 128 (257)
T ss_dssp SSEEEEEESCCTTSHHHHHHHHHHHHH---------HHHC-TTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHhh---------hhhC-CCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHH
Confidence 345699999999999988877653000 0000 2 25899999876 4433 4444
Q ss_pred HhhhcC----------CC--CCceEEEEccccc-CCCCC----CCeeEEEecc-ccccccC--HHHHHHHHHhhccCCcE
Q 036563 143 RALERG----------YP--DKSLLWVEGDAEA-LCFED----STMDGYTIAF-GIRNVTH--IEKALAEAYRVLKRGGR 202 (288)
Q Consensus 143 ~~~~~~----------~~--~~~v~~~~~d~~~-~~~~~----~~~D~v~~~~-~l~~~~~--~~~~l~~~~~~L~pgG~ 202 (288)
.+..+. +. ..++++..+|+.+ ++... ..||+|+... .-...++ ...+++.+.++|+|||.
T Consensus 129 l~~~w~~~~~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~ 208 (257)
T 2qy6_A 129 LQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGT 208 (257)
T ss_dssp HHHTCCCSCSEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEE
T ss_pred HHHhccccccchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcE
Confidence 443311 11 1356788899876 33222 2799999853 2222223 26789999999999999
Q ss_pred EEE
Q 036563 203 FLC 205 (288)
Q Consensus 203 l~i 205 (288)
|+.
T Consensus 209 l~t 211 (257)
T 2qy6_A 209 LAT 211 (257)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 276
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.72 E-value=4.4e-09 Score=90.61 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=66.0
Q ss_pred hhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCCh-------hHHHHHHHHhhhcCC
Q 036563 77 SKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINP-------NMLNVGKKRALERGY 149 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~-------~~~~~a~~~~~~~~~ 149 (288)
..+...++.+|||+|||+|..+..++... .+|+++|+++ .+++.++++....++
T Consensus 77 ~a~~~~~~~~VLDlgcG~G~~a~~lA~~g-------------------~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~ 137 (258)
T 2r6z_A 77 KAVNHTAHPTVWDATAGLGRDSFVLASLG-------------------LTVTAFEQHPAVACLLSDGIRRALLNPETQDT 137 (258)
T ss_dssp HHTTGGGCCCEEETTCTTCHHHHHHHHTT-------------------CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred HHhCcCCcCeEEEeeCccCHHHHHHHHhC-------------------CEEEEEECChhhhHHHHHHHHHHHhHHHhhCC
Confidence 33344456799999999999999998863 7899999999 999999887665544
Q ss_pred CCCceEEEEcccccC-C-CCC--CCeeEEEecccccc
Q 036563 150 PDKSLLWVEGDAEAL-C-FED--STMDGYTIAFGIRN 182 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~-~-~~~--~~~D~v~~~~~l~~ 182 (288)
. ++++++.+|+.+. + +++ ++||+|+++..+.+
T Consensus 138 ~-~ri~~~~~d~~~~l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 138 A-ARINLHFGNAAEQMPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp H-TTEEEEESCHHHHHHHHHHHHCCCSEEEECCCC--
T ss_pred c-cCeEEEECCHHHHHHhhhccCCCccEEEECCCCCC
Confidence 3 4599999998774 2 333 68999999877654
No 277
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.71 E-value=1.7e-08 Score=86.61 Aligned_cols=89 Identities=13% Similarity=0.131 Sum_probs=66.9
Q ss_pred HHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 69 RLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 69 ~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
..+.+.+++.+...++.+|||||||+|.++. + ... ...+++++|+++.|++.++++....
T Consensus 7 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l-~~~-----------------~~~~v~avEid~~~~~~a~~~~~~~- 66 (252)
T 1qyr_A 7 QFVIDSIVSAINPQKGQAMVEIGPGLAALTE-P-VGE-----------------RLDQLTVIELDRDLAARLQTHPFLG- 66 (252)
T ss_dssp HHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-H-HHT-----------------TCSCEEEECCCHHHHHHHHTCTTTG-
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-h-hhC-----------------CCCeEEEEECCHHHHHHHHHHhccC-
Confidence 3455677788877788899999999999999 5 332 1223999999999999998876543
Q ss_pred CCCCceEEEEcccccCCCCC-----CCeeEEEecccc
Q 036563 149 YPDKSLLWVEGDAEALCFED-----STMDGYTIAFGI 180 (288)
Q Consensus 149 ~~~~~v~~~~~d~~~~~~~~-----~~~D~v~~~~~l 180 (288)
++++++.+|+..+++++ +..|.|+++...
T Consensus 67 ---~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsNlPY 100 (252)
T 1qyr_A 67 ---PKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPY 100 (252)
T ss_dssp ---GGEEEECSCGGGCCHHHHHHHHTSCEEEEEECCT
T ss_pred ---CceEEEECchhhCCHHHhhcccCCceEEEECCCC
Confidence 48999999998876432 234677776654
No 278
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.66 E-value=3.7e-07 Score=79.52 Aligned_cols=109 Identities=16% Similarity=0.158 Sum_probs=84.9
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc---CCCCCceEEEE
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER---GYPDKSLLWVE 158 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~---~~~~~~v~~~~ 158 (288)
+.+.+||=||.|.|..+..+++.. +..+++.+|+++.+++.+++.+... .+.+++++++.
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~-----------------~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~ 144 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHK-----------------NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVI 144 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCT-----------------TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcC-----------------CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEe
Confidence 345799999999999999999875 3579999999999999999987542 23358999999
Q ss_pred cccccC-CCCCCCeeEEEecccccccc----CHHHHHHHHHhhccCCcEEEEEe
Q 036563 159 GDAEAL-CFEDSTMDGYTIAFGIRNVT----HIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 159 ~d~~~~-~~~~~~~D~v~~~~~l~~~~----~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+|+... ....++||+|+....-..-+ -...+++.+++.|+|||.+++..
T Consensus 145 ~Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 145 DDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp SCTTTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred chHHHHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 998775 34456899999865411111 12568999999999999999743
No 279
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.61 E-value=7e-07 Score=73.64 Aligned_cols=96 Identities=8% Similarity=-0.099 Sum_probs=73.7
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC--CCCceEEEEccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY--PDKSLLWVEGDA 161 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~--~~~~v~~~~~d~ 161 (288)
..+|||+||| ..+..+++. ++++++.+|.+++..+.+++.+...++ . .++++..+|+
T Consensus 31 a~~VLEiGtG--ySTl~lA~~------------------~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~-~~I~~~~gda 89 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAEL------------------PGKHVTSVESDRAWARMMKAWLAANPPAEG-TEVNIVWTDI 89 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTS------------------TTCEEEEEESCHHHHHHHHHHHHHSCCCTT-CEEEEEECCC
T ss_pred CCEEEEECch--HHHHHHHHc------------------CCCEEEEEeCCHHHHHHHHHHHHHcCCCCC-CceEEEEeCc
Confidence 5699999984 566666653 248999999999999999999998876 4 6899999996
Q ss_pred ccC---------------C--------C-CCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 162 EAL---------------C--------F-EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 162 ~~~---------------~--------~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
... + . ..++||+|++..-. ....+..+.+.|+|||.+++
T Consensus 90 ~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k-----~~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 90 GPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF-----RVGCALATAFSITRPVTLLF 152 (202)
T ss_dssp SSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS-----HHHHHHHHHHHCSSCEEEEE
T ss_pred hhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC-----chhHHHHHHHhcCCCeEEEE
Confidence 432 1 1 13679999987642 23566667899999999975
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.58 E-value=6.9e-08 Score=82.69 Aligned_cols=113 Identities=11% Similarity=0.058 Sum_probs=74.2
Q ss_pred HHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 75 LVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 75 ~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+.+.....++.+|||+|||+|.++..+++..+ ...+.++|+...+....... ...+ .++
T Consensus 66 i~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~-----------------~~~v~g~dVGvDl~~~pi~~-~~~g---~~i 124 (277)
T 3evf_A 66 FHERGYVKLEGRVIDLGCGRGGWCYYAAAQKE-----------------VSGVKGFTLGRDGHEKPMNV-QSLG---WNI 124 (277)
T ss_dssp HHHTTSSCCCEEEEEETCTTCHHHHHHHTSTT-----------------EEEEEEECCCCTTCCCCCCC-CBTT---GGG
T ss_pred HHHhCCCCCCCEEEEecCCCCHHHHHHHHhcC-----------------CCcceeEEEeccCccccccc-CcCC---CCe
Confidence 33444456778999999999999998887642 36788888875431000000 0001 145
Q ss_pred EEEEcccccCCCCCCCeeEEEeccccccccC----H---HHHHHHHHhhccCC-cEEEEEecc
Q 036563 155 LWVEGDAEALCFEDSTMDGYTIAFGIRNVTH----I---EKALAEAYRVLKRG-GRFLCLELS 209 (288)
Q Consensus 155 ~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~----~---~~~l~~~~~~L~pg-G~l~i~~~~ 209 (288)
..+..+++...++.+++|+|++..+.+ ... . ..+|+.+.++|+|| |.|++--+.
T Consensus 125 i~~~~~~dv~~l~~~~~DlVlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 125 ITFKDKTDIHRLEPVKCDTLLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp EEEECSCCTTTSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EEEeccceehhcCCCCccEEEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 556666655566778899999988765 221 1 12468889999999 999985555
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.58 E-value=2.2e-07 Score=89.18 Aligned_cols=114 Identities=16% Similarity=0.145 Sum_probs=74.9
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+..|||+|||+|.++...+......+.. -+-+......+|+++|.++.+....+... ..++. ++|.++.+|+++
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~----~~~~~~~~~~kVyAVEknp~A~~~l~~~~-~Ng~~-d~VtVI~gd~ee 483 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNT----FRQGQESLKVKLYIVEKNPNAIVTLKYMN-VRTWK-RRVTIIESDMRS 483 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHH----HSTTSCCCEEEEEEEECCHHHHHHHHHHH-HHTTT-TCSEEEESCGGG
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCcc----ccccccccccEEEEEeCChHHHHHHHHHH-hcCCC-CeEEEEeCchhh
Confidence 4579999999999976544432100000 00000001249999999997775555444 36666 679999999998
Q ss_pred CCCC-----CCCeeEEEecccccccc---CHHHHHHHHHhhccCCcEEE
Q 036563 164 LCFE-----DSTMDGYTIAFGIRNVT---HIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 164 ~~~~-----~~~~D~v~~~~~l~~~~---~~~~~l~~~~~~L~pgG~l~ 204 (288)
+..+ .+++|+|++=.. ..+- -....|..+.+.|+|||.++
T Consensus 484 v~lp~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 484 LPGIAKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHHHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cccccccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 8653 568999997443 2221 23467888889999999876
No 282
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.54 E-value=5.5e-07 Score=80.87 Aligned_cols=122 Identities=18% Similarity=0.111 Sum_probs=92.5
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCC--
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYP-- 150 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~-- 150 (288)
......+.++++.+|||++||+|.-+.++++.. +...++++|+++..+...++++...+..
T Consensus 138 ~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~-----------------~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~ 200 (359)
T 4fzv_A 138 LLPVLALGLQPGDIVLDLCAAPGGKTLALLQTG-----------------CCRNLAANDLSPSRIARLQKILHSYVPEEI 200 (359)
T ss_dssp HHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTT-----------------CEEEEEEECSCHHHHHHHHHHHHHHSCTTT
T ss_pred HHHHHHhCCCCCCEEEEecCCccHHHHHHHHhc-----------------CCCcEEEEcCCHHHHHHHHHHHHHhhhhhh
Confidence 344567788899999999999999999998875 3578999999999999998888766542
Q ss_pred --CCceEEEEcccccCC-CCCCCeeEEEecccccc--------ccC----------------HHHHHHHHHhhccCCcEE
Q 036563 151 --DKSLLWVEGDAEALC-FEDSTMDGYTIAFGIRN--------VTH----------------IEKALAEAYRVLKRGGRF 203 (288)
Q Consensus 151 --~~~v~~~~~d~~~~~-~~~~~~D~v~~~~~l~~--------~~~----------------~~~~l~~~~~~L~pgG~l 203 (288)
..++.+...|...++ ...+.||.|++...... -++ -.++|.+..+.|||||.+
T Consensus 201 ~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~L 280 (359)
T 4fzv_A 201 RDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHV 280 (359)
T ss_dssp TTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEE
T ss_pred ccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 146888888887753 34568999997543221 111 035788999999999999
Q ss_pred EEEeccCC
Q 036563 204 LCLELSHV 211 (288)
Q Consensus 204 ~i~~~~~~ 211 (288)
+...++..
T Consensus 281 VYsTCSl~ 288 (359)
T 4fzv_A 281 VYSTCSLS 288 (359)
T ss_dssp EEEESCCC
T ss_pred EEEeCCCc
Confidence 98777654
No 283
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.54 E-value=9.2e-08 Score=82.17 Aligned_cols=108 Identities=11% Similarity=0.065 Sum_probs=72.6
Q ss_pred HHHHhhcCCCCC--CeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc---
Q 036563 73 DRLVSKLNPFPG--MKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER--- 147 (288)
Q Consensus 73 ~~~~~~l~~~~~--~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--- 147 (288)
+.+.+.+...++ .+|||++||+|..+..++... ++|+++|+++.+...++..+...
T Consensus 76 e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g-------------------~~V~~vE~~~~~~~l~~~~l~~a~~~ 136 (258)
T 2oyr_A 76 EAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVG-------------------CRVRMLERNPVVAALLDDGLARGYAD 136 (258)
T ss_dssp SHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHT-------------------CCEEEEECCHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcC-------------------CEEEEEECCHHHHHHHHHHHHHHHhh
Confidence 345556655566 799999999999999999873 68999999998766665554321
Q ss_pred ----C-CCCCceEEEEcccccC-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCc
Q 036563 148 ----G-YPDKSLLWVEGDAEAL-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGG 201 (288)
Q Consensus 148 ----~-~~~~~v~~~~~d~~~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 201 (288)
+ +. .+++++.+|+.+. +...+.||+|++...+.+-. ...++++..+.|++.+
T Consensus 137 ~~~~~~l~-~~i~~~~~D~~~~L~~~~~~fDvV~lDP~y~~~~-~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 137 AEIGGWLQ-ERLQLIHASSLTALTDITPRPQVVYLDPMFPHKQ-KSALVKKEMRVFQSLV 194 (258)
T ss_dssp TTTHHHHH-HHEEEEESCHHHHSTTCSSCCSEEEECCCCCCCC-C-----HHHHHHHHHS
T ss_pred Hhhhhhhh-cCEEEEECCHHHHHHhCcccCCEEEEcCCCCCcc-cchHHHHHHHHHHHhh
Confidence 1 11 3689999998763 32223699999998876532 2345555666666544
No 284
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.51 E-value=9.4e-08 Score=87.23 Aligned_cols=77 Identities=14% Similarity=0.095 Sum_probs=64.0
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc--CCCCCceEEEEcc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER--GYPDKSLLWVEGD 160 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~--~~~~~~v~~~~~d 160 (288)
++.+|||+|||+|..+..++... .+|+++|+++.+++.+++++... ++ .+++++++|
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g-------------------~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i~~D 151 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA-------------------SQGIYIERNDETAVAARHNIPLLLNEG--KDVNILTGD 151 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC-------------------SEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEEESC
T ss_pred CCCEEEEeCCCchHHHHHHHhcC-------------------CEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEEECc
Confidence 37899999999999998887763 79999999999999999999876 65 489999999
Q ss_pred cccC-CC-CCCCeeEEEecccc
Q 036563 161 AEAL-CF-EDSTMDGYTIAFGI 180 (288)
Q Consensus 161 ~~~~-~~-~~~~~D~v~~~~~l 180 (288)
+.+. +. ++.+||+|+++...
T Consensus 152 a~~~L~~~~~~~fDvV~lDPPr 173 (410)
T 3ll7_A 152 FKEYLPLIKTFHPDYIYVDPAR 173 (410)
T ss_dssp GGGSHHHHHHHCCSEEEECCEE
T ss_pred HHHhhhhccCCCceEEEECCCC
Confidence 8874 22 23579999997553
No 285
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.43 E-value=6.3e-06 Score=77.92 Aligned_cols=161 Identities=14% Similarity=0.077 Sum_probs=102.9
Q ss_pred hHHHHHHHhHhhHHHhhhhhhh-hhhhhHHHHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccc
Q 036563 42 SQLVSNVFSSVAKNYDLMNDLM-SGGLHRLWKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDD 120 (288)
Q Consensus 42 ~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~ 120 (288)
...+.++|+..-..+....... -.-..+.+.+.|++.+.+.++.+|+|.+||+|.+...+.+.+........ ...
T Consensus 175 ~d~lG~~yE~ll~~~~~~~g~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~----~~~ 250 (530)
T 3ufb_A 175 MHTLSRLYETMLREMRDAAGDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVE----DRE 250 (530)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHH----HHH
T ss_pred hHHHHHHHHHHHHHHHHhcCcCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchh----HHH
Confidence 3556677776666554221100 01112456678888888888889999999999999888876531110000 000
Q ss_pred cCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCC----CCCCCeeEEEeccccccccC-----------
Q 036563 121 LQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALC----FEDSTMDGYTIAFGIRNVTH----------- 185 (288)
Q Consensus 121 ~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~----~~~~~~D~v~~~~~l~~~~~----------- 185 (288)
......++|+|+++.+...|+.++.-.+.. ...+..+|....+ ....+||+|+++..+.....
T Consensus 251 ~~~~~~i~G~E~~~~~~~la~mNl~lhg~~--~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~ 328 (530)
T 3ufb_A 251 VLQESSIFGGEAKSLPYLLVQMNLLLHGLE--YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDM 328 (530)
T ss_dssp HHHTCCEEEECCSHHHHHHHHHHHHHHTCS--CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGG
T ss_pred HHhhhhhhhhhccHHHHHHHHHHHHhcCCc--cccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhc
Confidence 001256999999999999999887777664 3456667754433 12347999999988742211
Q ss_pred -----HHHHHHHHHhhcc-------CCcEEEEEec
Q 036563 186 -----IEKALAEAYRVLK-------RGGRFLCLEL 208 (288)
Q Consensus 186 -----~~~~l~~~~~~L~-------pgG~l~i~~~ 208 (288)
-..++..+.+.|+ |||++.++-.
T Consensus 329 ~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 329 QTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp CCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred ccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 1346788888886 6999887543
No 286
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.40 E-value=3.9e-07 Score=78.21 Aligned_cols=113 Identities=15% Similarity=0.115 Sum_probs=73.6
Q ss_pred HHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 75 LVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 75 ~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+.+.....++.+|||+|||+|.++..+++..+ ...+.++|++..+...+... ...+ .++
T Consensus 82 i~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~g-----------------v~sV~GvdvG~d~~~~pi~~-~~~g---~~i 140 (282)
T 3gcz_A 82 MEERGYVKPTGIVVDLGCGRGGWSYYAASLKN-----------------VKKVMAFTLGVQGHEKPIMR-TTLG---WNL 140 (282)
T ss_dssp HHHTTSCCCCEEEEEETCTTCHHHHHHHTSTT-----------------EEEEEEECCCCTTSCCCCCC-CBTT---GGG
T ss_pred HHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcC-----------------CCeeeeEEeccCcccccccc-ccCC---Cce
Confidence 44444567788999999999999999887652 46788999976542211100 0001 233
Q ss_pred EEEEcccccCCCCCCCeeEEEeccccccccC-----H--HHHHHHHHhhccCC--cEEEEEecc
Q 036563 155 LWVEGDAEALCFEDSTMDGYTIAFGIRNVTH-----I--EKALAEAYRVLKRG--GRFLCLELS 209 (288)
Q Consensus 155 ~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~-----~--~~~l~~~~~~L~pg--G~l~i~~~~ 209 (288)
..+..++....++..++|+|+|..+.. ... . ..+|.-+.++|+|| |.|++--+.
T Consensus 141 i~~~~~~dv~~l~~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 141 IRFKDKTDVFNMEVIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp EEEECSCCGGGSCCCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred EEeeCCcchhhcCCCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 444433333345567899999988866 321 1 13577778999999 999986666
No 287
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.34 E-value=4.6e-06 Score=81.35 Aligned_cols=112 Identities=14% Similarity=0.059 Sum_probs=75.8
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHH--HHHhhhcCCC--CCceEEE
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVG--KKRALERGYP--DKSLLWV 157 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a--~~~~~~~~~~--~~~v~~~ 157 (288)
.++.+|||.|||+|.++..+++..+. .....++|+|+++.++..| +..+....+. .....+.
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~e--------------i~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~ 385 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNN--------------VMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTIT 385 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTT--------------CCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEE
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcc--------------cCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEE
Confidence 35779999999999999999887520 0126799999999999999 4443321111 0123455
Q ss_pred EcccccC-CCCCCCeeEEEecccccc-cc---------------------------C-HHHHHHHHHhhccCCcEEEEEe
Q 036563 158 EGDAEAL-CFEDSTMDGYTIAFGIRN-VT---------------------------H-IEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 158 ~~d~~~~-~~~~~~~D~v~~~~~l~~-~~---------------------------~-~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
..|+... .....+||+|+++..+.. .. + ...++..+.+.|+|||++.++-
T Consensus 386 ~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 386 GEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp CCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 5565543 223467999999988632 11 0 1236888999999999998754
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.34 E-value=3.1e-06 Score=73.47 Aligned_cols=110 Identities=10% Similarity=0.044 Sum_probs=81.2
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCCh--------------------------h
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINP--------------------------N 135 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~--------------------------~ 135 (288)
..+++|||+|+..|..+..++.....- ..++.+++++|..+ .
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~------------g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~ 172 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAH------------DVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAV 172 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHT------------TCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCC
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhc------------CCCCCEEEEEECCCCCCcccccccccccccccccccccchh
Confidence 345699999999999998887765210 00257899999632 1
Q ss_pred HHHHHHHHhhhcCCCCCceEEEEccccc-CC-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 136 MLNVGKKRALERGYPDKSLLWVEGDAEA-LC-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 136 ~~~~a~~~~~~~~~~~~~v~~~~~d~~~-~~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
.++.+++++...++..++++++.+|+.+ ++ .+.++||+|++.... .......|+.+.+.|+|||.+++
T Consensus 173 ~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~ 242 (282)
T 2wk1_A 173 SEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIV 242 (282)
T ss_dssp CHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEE
Confidence 4677888888888743689999999865 33 345689999987642 12346789999999999999986
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.24 E-value=1.6e-05 Score=71.06 Aligned_cols=96 Identities=17% Similarity=0.188 Sum_probs=67.6
Q ss_pred CCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
..+++++||+||++|.++..+++.. .+|+++|+.+ |-.... .. ++|.++++|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg-------------------~~V~aVD~~~-l~~~l~----~~----~~V~~~~~d 260 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRN-------------------MWVYSVDNGP-MAQSLM----DT----GQVTWLRED 260 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTT-------------------CEEEEECSSC-CCHHHH----TT----TCEEEECSC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCC-------------------CEEEEEEhhh-cChhhc----cC----CCeEEEeCc
Confidence 3568999999999999999998873 7999999865 222221 11 689999999
Q ss_pred cccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccC---CcEEEEEec
Q 036563 161 AEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKR---GGRFLCLEL 208 (288)
Q Consensus 161 ~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~p---gG~l~i~~~ 208 (288)
+.....+...+|+|+|..+. .+...+.-+.+.|.. ++.++.+.+
T Consensus 261 ~~~~~~~~~~~D~vvsDm~~----~p~~~~~l~~~wl~~~~~~~aI~~lKL 307 (375)
T 4auk_A 261 GFKFRPTRSNISWMVCDMVE----KPAKVAALMAQWLVNGWCRETIFNLKL 307 (375)
T ss_dssp TTTCCCCSSCEEEEEECCSS----CHHHHHHHHHHHHHTTSCSEEEEEEEC
T ss_pred cccccCCCCCcCEEEEcCCC----ChHHhHHHHHHHHhccccceEEEEEEe
Confidence 88876666789999998874 344444444444444 355554433
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.16 E-value=1.4e-05 Score=71.70 Aligned_cols=107 Identities=17% Similarity=0.241 Sum_probs=78.7
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC---CC---CCceE
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG---YP---DKSLL 155 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~---~~---~~~v~ 155 (288)
.++.+||=||.|.|..+..++++ +..+++.+|+++.+++.+++.+.... .. .++++
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh------------------~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~ 265 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL------------------KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQ 265 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT------------------CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEE
T ss_pred CCCCeEEEECCCcHHHHHHHHhc------------------CCceeEEEccCHHHHHHHHhhchhhhhhhhcccccccee
Confidence 34579999999999999999886 34789999999999999998764321 11 24588
Q ss_pred EEEcccccCC----CCCCCeeEEEeccccccc-cC---------HHHHHHHHHhhccCCcEEEEE
Q 036563 156 WVEGDAEALC----FEDSTMDGYTIAFGIRNV-TH---------IEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 156 ~~~~d~~~~~----~~~~~~D~v~~~~~l~~~-~~---------~~~~l~~~~~~L~pgG~l~i~ 206 (288)
++.+|+...- ...++||+|+....-... .+ ...+++.+++.|+|||.++..
T Consensus 266 vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 266 VLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp EEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 9999986541 234579999986432111 11 146789999999999999864
No 291
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.16 E-value=8.6e-06 Score=70.16 Aligned_cols=83 Identities=23% Similarity=0.238 Sum_probs=68.4
Q ss_pred HHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 72 KDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 72 ~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
.+++++.+...+++.+||.+||.|..+..+++. + ++++++|.++.+++.+++ +..
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~------------------g~VigiD~Dp~Ai~~A~~-L~~----- 65 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER-G------------------GRVIGLDQDPEAVARAKG-LHL----- 65 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-T------------------CEEEEEESCHHHHHHHHH-TCC-----
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-C------------------CEEEEEeCCHHHHHHHHh-hcc-----
Confidence 356777888888899999999999999999987 3 799999999999999988 543
Q ss_pred CceEEEEcccccCC-----CCCCCeeEEEeccc
Q 036563 152 KSLLWVEGDAEALC-----FEDSTMDGYTIAFG 179 (288)
Q Consensus 152 ~~v~~~~~d~~~~~-----~~~~~~D~v~~~~~ 179 (288)
+++.++.+++.++. ...+++|.|++...
T Consensus 66 ~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~DLG 98 (285)
T 1wg8_A 66 PGLTVVQGNFRHLKRHLAALGVERVDGILADLG 98 (285)
T ss_dssp TTEEEEESCGGGHHHHHHHTTCSCEEEEEEECS
T ss_pred CCEEEEECCcchHHHHHHHcCCCCcCEEEeCCc
Confidence 48999999998763 22357999997554
No 292
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=98.08 E-value=1e-06 Score=96.63 Aligned_cols=154 Identities=18% Similarity=0.183 Sum_probs=74.2
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccC-CCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQ-EETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
.+..+|||||.|+|..+..+++.+.. .+ ...+|+..|+|+...+.+++++... ++.....|
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~-------------~~~~~~~yt~td~s~~~~~~a~~~f~~~-----di~~~~~d 1300 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNT-------------QPVMDLDYTATDRNPQALEAAQAKLEQL-----HVTQGQWD 1300 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTT-------------SSSCEEEEEEECSSSSSTTTTTTTHHHH-----TEEEECCC
T ss_pred CCCceEEEECCCccHHHHHHHHhhcc-------------cCcccceEEEecCChHHHHHHHHHhhhc-----cccccccc
Confidence 35679999999999987777766520 00 1258999999998887777666442 23332234
Q ss_pred cccC-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhccccccccccccCCC
Q 036563 161 AEAL-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVIPAIGELVAGDR 239 (288)
Q Consensus 161 ~~~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
.... ++....||+|++.+++|...+....|.+++++|+|||++++.+.... ..+..... . +....
T Consensus 1301 ~~~~~~~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~--~~~g~~~~-----------~-~~~~~ 1366 (2512)
T 2vz8_A 1301 PANPAPGSLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAG--HPLGEMVG-----------F-LTSPE 1366 (2512)
T ss_dssp SSCCCC-----CCEEEEECC--------------------CCEEEEEEC-------------------------------
T ss_pred ccccccCCCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEecccc--cccccccc-----------c-ccccc
Confidence 3322 23445799999999999888889999999999999999998765321 00100000 0 00000
Q ss_pred cchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEE
Q 036563 240 GSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYEN 274 (288)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 274 (288)
.....+.+.++|.++|+++||..+....
T Consensus 1367 -------r~~~~~~~~~~w~~~l~~~gf~~~~~~~ 1394 (2512)
T 2vz8_A 1367 -------QGGRHLLSQDQWESLFAGASLHLVALKR 1394 (2512)
T ss_dssp ----------------CTTTTSSTTTTEEEEEEEE
T ss_pred -------ccCCcccCHHHHHHHHHhCCCceeeecc
Confidence 0011234677888899999999877643
No 293
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.07 E-value=1.4e-05 Score=69.06 Aligned_cols=106 Identities=11% Similarity=0.049 Sum_probs=68.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|||+||++|.++..+++..+ ...+.++|+...+...... ....+ .++.....+.
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~g-----------------v~sV~Gvdlg~~~~~~P~~-~~~~~---~~iv~~~~~~ 138 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKE-----------------VMSVKGYTLGIEGHEKPIH-MQTLG---WNIVKFKDKS 138 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTT-----------------EEEEEEECCCCTTSCCCCC-CCBTT---GGGEEEECSC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcC-----------------CceeeeEEecccccccccc-ccccC---CceEEeecCc
Confidence 5678999999999999999998652 3678899987543110000 00001 1233333333
Q ss_pred ccCCCCCCCeeEEEeccccccccCH-------HHHHHHHHhhccCC-cEEEEEecc
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHI-------EKALAEAYRVLKRG-GRFLCLELS 209 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~-------~~~l~~~~~~L~pg-G~l~i~~~~ 209 (288)
....+..+.+|+|++..+.. .... ..+|.-+.++|+|| |.|++--+.
T Consensus 139 di~~l~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 139 NVFTMPTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CTTTSCCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred eeeecCCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 22334567899999987765 3221 23577778999999 999987666
No 294
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.93 E-value=4.6e-05 Score=58.97 Aligned_cols=85 Identities=19% Similarity=0.151 Sum_probs=58.9
Q ss_pred CCeEEEecCCcc-HHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTG-DVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
+.+|||||||+| ..+..++++. +..|+++|+++..++ +++.|+.
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~~------------------g~~V~atDInp~Av~-----------------~v~dDiF 80 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKHS------------------KVDLVLTDIKPSHGG-----------------IVRDDIT 80 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHHS------------------CCEEEEECSSCSSTT-----------------EECCCSS
T ss_pred CCcEEEEccCCChHHHHHHHHhC------------------CCeEEEEECCccccc-----------------eEEccCC
Confidence 579999999999 6998888764 488999999986533 6778887
Q ss_pred cCCCCC-CCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 163 ALCFED-STMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 163 ~~~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+..... +.||+|.+... .++....+.++.+. -|.-+++..+
T Consensus 81 ~P~~~~Y~~~DLIYsirP---P~El~~~i~~lA~~--v~adliI~pL 122 (153)
T 2k4m_A 81 SPRMEIYRGAALIYSIRP---PAEIHSSLMRVADA--VGARLIIKPL 122 (153)
T ss_dssp SCCHHHHTTEEEEEEESC---CTTTHHHHHHHHHH--HTCEEEEECB
T ss_pred CCcccccCCcCEEEEcCC---CHHHHHHHHHHHHH--cCCCEEEEcC
Confidence 643211 37999976443 23555555555553 3566776443
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.84 E-value=7.2e-05 Score=63.24 Aligned_cols=110 Identities=16% Similarity=0.033 Sum_probs=67.0
Q ss_pred HHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 74 RLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
+|.+..-..|+++|||+||++|.++..+++..+ ...+.+.++...- . ..+....+ ++
T Consensus 64 EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~-----------------vg~V~G~vig~D~-~----~~P~~~~~-~G 120 (269)
T 2px2_A 64 WLVERRFVQPIGKVVDLGCGRGGWSYYAATMKN-----------------VQEVRGYTKGGPG-H----EEPMLMQS-YG 120 (269)
T ss_dssp HHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTT-----------------EEEEEEECCCSTT-S----CCCCCCCS-TT
T ss_pred HHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcC-----------------CCCceeEEEcccc-c----cCCCcccC-CC
Confidence 444444457789999999999999999988732 1233333332220 0 00000000 12
Q ss_pred e---EEEEc-ccccCCCCCCCeeEEEeccccccccCH-------HHHHHHHHhhccCCc-EEEEEecc
Q 036563 154 L---LWVEG-DAEALCFEDSTMDGYTIAFGIRNVTHI-------EKALAEAYRVLKRGG-RFLCLELS 209 (288)
Q Consensus 154 v---~~~~~-d~~~~~~~~~~~D~v~~~~~l~~~~~~-------~~~l~~~~~~L~pgG-~l~i~~~~ 209 (288)
+ .+.++ |+..+. ..++|+|+|..+-. ..+. ..+|.-+.+.|+||| .|++--+.
T Consensus 121 v~~i~~~~G~Df~~~~--~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 121 WNIVTMKSGVDVFYKP--SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp GGGEEEECSCCGGGSC--CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred ceEEEeeccCCccCCC--CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 2 55556 887643 45799999987653 2221 125777779999999 88886666
No 296
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.81 E-value=0.00018 Score=61.87 Aligned_cols=114 Identities=16% Similarity=0.092 Sum_probs=75.2
Q ss_pred HHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 74 RLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
.+.+.....++++|||+||++|.++..++...+ ...|+++|+...--+.= ......++ +.
T Consensus 85 ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~g-----------------v~~V~avdvG~~~he~P-~~~~ql~w--~l 144 (321)
T 3lkz_A 85 WLVERRFLEPVGKVIDLGCGRGGWCYYMATQKR-----------------VQEVRGYTKGGPGHEEP-QLVQSYGW--NI 144 (321)
T ss_dssp HHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTT-----------------EEEEEEECCCSTTSCCC-CCCCBTTG--GG
T ss_pred HHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcC-----------------CCEEEEEEcCCCCccCc-chhhhcCC--cc
Confidence 344445567788999999999999998888763 36899999866511000 00011222 24
Q ss_pred eEEEEc-ccccCCCCCCCeeEEEeccccccccCH-------HHHHHHHHhhccCC-cEEEEEeccC
Q 036563 154 LLWVEG-DAEALCFEDSTMDGYTIAFGIRNVTHI-------EKALAEAYRVLKRG-GRFLCLELSH 210 (288)
Q Consensus 154 v~~~~~-d~~~~~~~~~~~D~v~~~~~l~~~~~~-------~~~l~~~~~~L~pg-G~l~i~~~~~ 210 (288)
+.+..+ |+..++. ..+|+|+|... ...+++ .++|+-+.+.|+++ |.|+|--+..
T Consensus 145 V~~~~~~Dv~~l~~--~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 145 VTMKSGVDVFYRPS--ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp EEEECSCCTTSSCC--CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred eEEEeccCHhhCCC--CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 777777 8766643 56999999887 544443 23566677889988 8887744444
No 297
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.74 E-value=0.00017 Score=60.13 Aligned_cols=113 Identities=15% Similarity=0.090 Sum_probs=75.6
Q ss_pred HHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 74 RLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 74 ~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
++.+.....++++|||+||++|.++..++...+ ..+|+++|+...-.+.- ......++ +.
T Consensus 69 ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g-----------------~~~V~avdvG~~ghe~P-~~~~s~gw--n~ 128 (267)
T 3p8z_A 69 WFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKK-----------------VTEVRGYTKGGPGHEEP-VPMSTYGW--NI 128 (267)
T ss_dssp HHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTT-----------------EEEEEEECCCSTTSCCC-CCCCCTTT--TS
T ss_pred HHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcC-----------------CCEEEEEecCCCCccCc-chhhhcCc--Cc
Confidence 344444567888999999999999998888864 36899999865422100 00123344 47
Q ss_pred eEEEEc-ccccCCCCCCCeeEEEeccccccccCH-------HHHHHHHHhhccCCcEEEEEeccC
Q 036563 154 LLWVEG-DAEALCFEDSTMDGYTIAFGIRNVTHI-------EKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 154 v~~~~~-d~~~~~~~~~~~D~v~~~~~l~~~~~~-------~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
+.|..+ |+..++ ..++|.|+|...= ..+++ .++|+-+.+.|++ |.++|--+..
T Consensus 129 v~fk~gvDv~~~~--~~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~p 189 (267)
T 3p8z_A 129 VKLMSGKDVFYLP--PEKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNP 189 (267)
T ss_dssp EEEECSCCGGGCC--CCCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCC
T ss_pred eEEEeccceeecC--CccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccC
Confidence 899998 876554 3569999997764 22222 2366777889998 7777644443
No 298
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.70 E-value=0.00043 Score=60.41 Aligned_cols=76 Identities=13% Similarity=0.082 Sum_probs=52.7
Q ss_pred eEEEEcccccC-C-CCCCCeeEEEeccc-cccccCH--HHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHhhcccc
Q 036563 154 LLWVEGDAEAL-C-FEDSTMDGYTIAFG-IRNVTHI--EKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYYSFSVI 228 (288)
Q Consensus 154 v~~~~~d~~~~-~-~~~~~~D~v~~~~~-l~~~~~~--~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
+.+..+|+.+. + +.+..+|+++...- -..-+++ ..+++.++++++|||.+..
T Consensus 168 L~l~~GDa~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT----------------------- 224 (308)
T 3vyw_A 168 LKVLLGDARKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS----------------------- 224 (308)
T ss_dssp EEEEESCHHHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE-----------------------
T ss_pred EEEEechHHHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE-----------------------
Confidence 45677887553 2 34457999997541 1111222 6799999999999999973
Q ss_pred ccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 229 PAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
|.....++..|+++||++....-+
T Consensus 225 -----------------------Ytaag~VRR~L~~aGF~V~k~~G~ 248 (308)
T 3vyw_A 225 -----------------------YSSSLSVRKSLLTLGFKVGSSREI 248 (308)
T ss_dssp -----------------------SCCCHHHHHHHHHTTCEEEEEECC
T ss_pred -----------------------EeCcHHHHHHHHHCCCEEEecCCC
Confidence 225577889999999997766543
No 299
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.63 E-value=0.00016 Score=63.77 Aligned_cols=85 Identities=28% Similarity=0.347 Sum_probs=68.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+++++.+...+++.+||..||.|..+..+++.++ +.++++++|.++.+++.++ ++. ..
T Consensus 47 ~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg----------------~~GrVig~D~Dp~Al~~A~-rL~-----~~ 104 (347)
T 3tka_A 47 DEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLG----------------EEGRLLAIDRDPQAIAVAK-TID-----DP 104 (347)
T ss_dssp HHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCC----------------TTCEEEEEESCHHHHHHHT-TCC-----CT
T ss_pred HHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCC----------------CCCEEEEEECCHHHHHHHH-hhc-----CC
Confidence 5677888888899999999999999999999875 5689999999999999884 431 16
Q ss_pred ceEEEEcccccCC-----CC-CCCeeEEEeccc
Q 036563 153 SLLWVEGDAEALC-----FE-DSTMDGYTIAFG 179 (288)
Q Consensus 153 ~v~~~~~d~~~~~-----~~-~~~~D~v~~~~~ 179 (288)
++.++.+++.++. .. .+++|.|+....
T Consensus 105 Rv~lv~~nF~~l~~~L~~~g~~~~vDgILfDLG 137 (347)
T 3tka_A 105 RFSIIHGPFSALGEYVAERDLIGKIDGILLDLG 137 (347)
T ss_dssp TEEEEESCGGGHHHHHHHTTCTTCEEEEEEECS
T ss_pred cEEEEeCCHHHHHHHHHhcCCCCcccEEEECCc
Confidence 8999999987762 11 136999998665
No 300
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.59 E-value=0.001 Score=58.99 Aligned_cols=153 Identities=8% Similarity=-0.013 Sum_probs=97.6
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC-------C-----
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG-------Y----- 149 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~-------~----- 149 (288)
.+...|+.+|||.......+.... ++..++=+|. |+.++.-++.+...+ .
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~-----------------~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~ 157 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMF-----------------PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDT 157 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHC-----------------TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcC-----------------CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccc
Confidence 345689999999999888887653 2467777887 777766666655431 0
Q ss_pred -------CCCceEEEEcccccCC--------C-CCCCeeEEEeccccccccC--HHHHHHHHHhhccCCcEEEEEeccCC
Q 036563 150 -------PDKSLLWVEGDAEALC--------F-EDSTMDGYTIAFGIRNVTH--IEKALAEAYRVLKRGGRFLCLELSHV 211 (288)
Q Consensus 150 -------~~~~v~~~~~d~~~~~--------~-~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~~~~~~ 211 (288)
...+..++..|+.+.. . ..+...++++-.++.+++. ...+++.+.+.. |+|.+++.|...+
T Consensus 158 ~~~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~ 236 (334)
T 1rjd_A 158 AKSPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGG 236 (334)
T ss_dssp CCTTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCC
T ss_pred cccccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCC
Confidence 0157888989987631 1 2245788888888888863 456788787776 7888877776655
Q ss_pred ---ChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCc
Q 036563 212 ---DIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQ 268 (288)
Q Consensus 212 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 268 (288)
...+-..+...+... .+..+ .++..+++.++..+.|+++||+
T Consensus 237 ~~~~~~fg~~m~~~l~~~----rg~~l-----------~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 237 SQPNDRFGAIMQSNLKES----RNLEM-----------PTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp CSTTCCHHHHHHHHHHHH----HCCCC-----------TTTTTTCSHHHHHGGGTTSSEE
T ss_pred CCCcchHHHHHHHHhhcc----cCCcc-----------cccccCCCHHHHHHHHHHCCCC
Confidence 333333222222110 00000 0111256888999999999996
No 301
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.44 E-value=0.00049 Score=59.98 Aligned_cols=57 Identities=25% Similarity=0.312 Sum_probs=46.7
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER 147 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 147 (288)
+.+.++.... .++..|||++||+|.++..++.. +.+++++|+++.+++.+++++...
T Consensus 224 l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~-------------------g~~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 224 LAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARW-------------------GRRALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp HHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHT-------------------TCEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc-------------------CCeEEEEeCCHHHHHHHHHHHHHh
Confidence 3345555555 56789999999999999988775 379999999999999999998654
No 302
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.30 E-value=0.0019 Score=55.67 Aligned_cols=108 Identities=14% Similarity=0.037 Sum_probs=72.1
Q ss_pred CCCCCCeEEEecC------CccHHHHHHHHhhhhhhhhhhhcccccccCCC-ceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 80 NPFPGMKHLDVAG------GTGDVAFRILDTVNSIKRRALQDVLEDDLQEE-TRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 80 ~~~~~~~vLDiG~------G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
..+.+++|||+|+ .+|.. +++... +. +.++++|+.+-.. . .
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS~---VLr~~~----------------p~g~~VVavDL~~~~s---------d----a 153 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGTA---VLRQWL----------------PTGTLLVDSDLNDFVS---------D----A 153 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHHH---HHHHHS----------------CTTCEEEEEESSCCBC---------S----S
T ss_pred eecCCCEEEeCCCCCCCCCCCcHH---HHHHhC----------------CCCcEEEEeeCccccc---------C----C
Confidence 3467899999996 66763 344433 33 6999999977321 0 2
Q ss_pred ceEEEEcccccCCCCCCCeeEEEeccccc---cc--cC------HHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHH
Q 036563 153 SLLWVEGDAEALCFEDSTMDGYTIAFGIR---NV--TH------IEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYD 221 (288)
Q Consensus 153 ~v~~~~~d~~~~~~~~~~~D~v~~~~~l~---~~--~~------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~ 221 (288)
. .++++|...... ..+||+|++..+-. +. +. .+.++.-+.+.|+|||.|++--+.......+..+..
T Consensus 154 ~-~~IqGD~~~~~~-~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~~~L~~lrk 231 (344)
T 3r24_A 154 D-STLIGDCATVHT-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWNADLYKLMG 231 (344)
T ss_dssp S-EEEESCGGGEEE-SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCCHHHHHHHT
T ss_pred C-eEEEcccccccc-CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCHHHHHHHHh
Confidence 3 448899765432 46899999976522 11 11 356788889999999999987776666555555554
No 303
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.11 E-value=0.0014 Score=58.50 Aligned_cols=72 Identities=14% Similarity=0.137 Sum_probs=55.8
Q ss_pred HHHHHHhhcCCC------CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHh
Q 036563 71 WKDRLVSKLNPF------PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRA 144 (288)
Q Consensus 71 ~~~~~~~~l~~~------~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~ 144 (288)
..+.+++.+... ++..|||||+|.|.++..+++.. ...+++++|+++..+...++..
T Consensus 40 i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~-----------------~~~~vvavE~D~~l~~~L~~~~ 102 (353)
T 1i4w_A 40 VYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKY-----------------CPRQYSLLEKRSSLYKFLNAKF 102 (353)
T ss_dssp HHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHH-----------------CCSEEEEECCCHHHHHHHHHHT
T ss_pred HHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhC-----------------CCCEEEEEecCHHHHHHHHHhc
Confidence 345555655543 35789999999999999999874 1368999999999998888766
Q ss_pred hhcCCCCCceEEEEcccccC
Q 036563 145 LERGYPDKSLLWVEGDAEAL 164 (288)
Q Consensus 145 ~~~~~~~~~v~~~~~d~~~~ 164 (288)
.. ++++++.+|+..+
T Consensus 103 -~~----~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 103 -EG----SPLQILKRDPYDW 117 (353)
T ss_dssp -TT----SSCEEECSCTTCH
T ss_pred -cC----CCEEEEECCccch
Confidence 22 5899999998554
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.75 E-value=0.004 Score=53.06 Aligned_cols=55 Identities=20% Similarity=0.243 Sum_probs=44.7
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER 147 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~ 147 (288)
+.+++... .++..|||..||+|.++..+.+. +.+++++|+++.+++.+++++...
T Consensus 203 ~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~-------------------gr~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 203 ERIIRASS-NPNDLVLDCFMGSGTTAIVAKKL-------------------GRNFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp HHHHHHHC-CTTCEEEESSCTTCHHHHHHHHT-------------------TCEEEEEESCHHHHHHHHHHHHC-
T ss_pred HHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc-------------------CCeEEEEeCCHHHHHHHHHHHHhc
Confidence 44445444 56789999999999999988776 379999999999999999988654
No 305
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.67 E-value=0.0015 Score=56.31 Aligned_cols=99 Identities=14% Similarity=0.069 Sum_probs=76.3
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+..+||+=+|||.++..++.. ..+++.+|.++...+..++++... .++++...|...
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS~-------------------~d~~vfvE~~~~a~~~L~~Nl~~~----~~~~V~~~D~~~ 148 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLRS-------------------QDRLYLCELHPTEYNFLLKLPHFN----KKVYVNHTDGVS 148 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSCT-------------------TSEEEEECCSHHHHHHHTTSCCTT----SCEEEECSCHHH
T ss_pred CCCceeEeCCcHHHHHHHcCC-------------------CCeEEEEeCCHHHHHHHHHHhCcC----CcEEEEeCcHHH
Confidence 457999999999999888774 378999999999999888887642 579999999644
Q ss_pred C----CCCCCCeeEEEeccccccccCHHHHHHHHHh--hccCCcEEEE
Q 036563 164 L----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYR--VLKRGGRFLC 205 (288)
Q Consensus 164 ~----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~--~L~pgG~l~i 205 (288)
. ..+..+||+|++......-.+..++++.+.+ .+.|+|.+++
T Consensus 149 ~L~~l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 149 KLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV 196 (283)
T ss_dssp HHHHHCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHHHhcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE
Confidence 2 1234579999999987654566666666665 4558898886
No 306
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.66 E-value=0.31 Score=42.94 Aligned_cols=159 Identities=10% Similarity=0.068 Sum_probs=96.9
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC--------------
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG-------------- 148 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~-------------- 148 (288)
+...|+-+|||.=.....+..... +...++=+|. |+.++.=++.+...+
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~----------------~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~ 152 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDL----------------LSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDT 152 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTC----------------CCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSS
T ss_pred CCCEEEEeCCCcCchHHHhcCCCC----------------CCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccc
Confidence 356899999998777666654310 2356777776 544443222222100
Q ss_pred -------CCCCceEEEEcccccC----------CCCCCCeeEEEecccccccc--CHHHHHHHHHhhccCCcEEEEEecc
Q 036563 149 -------YPDKSLLWVEGDAEAL----------CFEDSTMDGYTIAFGIRNVT--HIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 149 -------~~~~~v~~~~~d~~~~----------~~~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
+...+..++..|+.+. .+..+..-++++=.++.+++ ....+|+.+.+.. |+|.+++.|..
T Consensus 153 ~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i 231 (334)
T 3iei_A 153 LQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQV 231 (334)
T ss_dssp CBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred cccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEecc
Confidence 0125678888888653 13344566778777888876 3456777777765 56667677877
Q ss_pred CCChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 210 HVDIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
.+..++-+.+...+...-.+. .++..+++.+...+.|.++||+.++..+.
T Consensus 232 ~p~d~fg~~M~~~l~~~g~pl----------------~sl~~y~t~~~~~~r~~~~Gw~~~~~~d~ 281 (334)
T 3iei_A 232 NMGDRFGQIMIENLRRRQCDL----------------AGVETCKSLESQKERLLSNGWETASAVDM 281 (334)
T ss_dssp CTTSHHHHHHHHHHHTTTCCC----------------TTGGGGGCHHHHHHHHHTTTCSEEEEEEH
T ss_pred CCCCHHHHHHHHHHHHhCCCC----------------cccccCCCHHHHHHHHHHcCCCcceeecH
Confidence 776665555544433211111 11223458889999999999998776543
No 307
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.58 E-value=0.039 Score=46.83 Aligned_cols=115 Identities=16% Similarity=0.035 Sum_probs=73.0
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEe-----CChh----------------------H
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCD-----INPN----------------------M 136 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D-----~s~~----------------------~ 136 (288)
++.|+|+|+-.|..+..++.... +++ .+.+..+++++| +.+. .
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~---------~l~-~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~ 139 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRG---------VYE-PYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAY 139 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHH---------HHC-TTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHH
T ss_pred CCeEEEEecccCHHHHHHHHHHH---------Hhc-ccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHH
Confidence 45899999999998888765421 000 011457899999 3321 1
Q ss_pred HHHHHH---HhhhcCCCCCceEEEEcccccC-C-----CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 137 LNVGKK---RALERGYPDKSLLWVEGDAEAL-C-----FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 137 ~~~a~~---~~~~~~~~~~~v~~~~~d~~~~-~-----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
++...+ +....+....++.++.+++.+. + .+..++|++++..-. .......++.+...|+|||.+++-+
T Consensus 140 l~~~l~~~~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 140 LKEVLDAHECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp HHHHHHHHHTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred HHHHHHHHhhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcC
Confidence 111111 1112333236899999998653 2 345579999987742 2345667999999999999999765
Q ss_pred ccC
Q 036563 208 LSH 210 (288)
Q Consensus 208 ~~~ 210 (288)
+..
T Consensus 218 ~~~ 220 (257)
T 3tos_A 218 LDN 220 (257)
T ss_dssp TTC
T ss_pred CCC
Confidence 543
No 308
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.26 E-value=0.1 Score=45.55 Aligned_cols=103 Identities=18% Similarity=0.161 Sum_probs=71.3
Q ss_pred CeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCC-CCCceEEEEccccc
Q 036563 85 MKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGY-PDKSLLWVEGDAEA 163 (288)
Q Consensus 85 ~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~-~~~~v~~~~~d~~~ 163 (288)
..||++|||-=.....+.. ++...++-+| .|..++..++.+...+. +..+..++..|+.+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~------------------~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW------------------PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC------------------CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred CeEEEeCCCCCchhhhccC------------------CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 4699999997655433321 1247889999 59888888888865332 12578889899875
Q ss_pred C--------CCCCCCeeEEEeccccccccC--HHHHHHHHHhhccCCcEEEEE
Q 036563 164 L--------CFEDSTMDGYTIAFGIRNVTH--IEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 164 ~--------~~~~~~~D~v~~~~~l~~~~~--~~~~l~~~~~~L~pgG~l~i~ 206 (288)
- .+..+..-++++-.+++++++ ...+++.+...+.||+.+++-
T Consensus 165 ~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d 217 (310)
T 2uyo_A 165 DWPPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVE 217 (310)
T ss_dssp CHHHHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEE
T ss_pred hHHHHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEE
Confidence 1 022234567778888888864 466888888888888888754
No 309
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.07 E-value=0.04 Score=49.14 Aligned_cols=100 Identities=16% Similarity=0.153 Sum_probs=67.1
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+.....++.+||-+|+|. |..+..+++..+ + +|+++|.+++.++.+++. +. -
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G------------------a~~Vi~~~~~~~~~~~a~~l----Ga----~ 237 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCG------------------ASIIIAVDIVESRLELAKQL----GA----T 237 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHT------------------CSEEEEEESCHHHHHHHHHH----TC----S
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCeEEEECCCHHHHHHHHHc----CC----C
Confidence 455667889999999986 888888888763 5 799999999988877653 21 1
Q ss_pred EEEEcccccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEGDAEAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d~~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.++..+-.++ ....+.+|+|+-... ....+....+.|+++|+++++..
T Consensus 238 ~vi~~~~~~~~~~~~~~~~gg~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 238 HVINSKTQDPVAAIKEITDGGVNFALESTG------SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEEETTTSCHHHHHHHHTTSCEEEEEECSC------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred EEecCCccCHHHHHHHhcCCCCcEEEECCC------CHHHHHHHHHHHhcCCEEEEeCC
Confidence 2222211111 112236999974332 24567889999999999987544
No 310
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.95 E-value=0.054 Score=52.57 Aligned_cols=116 Identities=15% Similarity=0.153 Sum_probs=64.8
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhh-hhhhhhcccccccCCCceEEEEeCCh---hHHHHHHHH-----------hhhc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSI-KRRALQDVLEDDLQEETRIYVCDINP---NMLNVGKKR-----------ALER 147 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~D~s~---~~~~~a~~~-----------~~~~ 147 (288)
+.-+|+|+|.|+|.......+..... ..++ .......+++.+|..| +.+..+-.. ...+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p------~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~ 131 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSP------NATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQW 131 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCT------TSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTC
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCC------CCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhC
Confidence 44689999999999888777754210 0000 0000125788999844 444432211 1111
Q ss_pred CC----------CCC--ceEEEEcccccC-C-CC---CCCeeEEEeccccccc-cC--HHHHHHHHHhhccCCcEEE
Q 036563 148 GY----------PDK--SLLWVEGDAEAL-C-FE---DSTMDGYTIAFGIRNV-TH--IEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 148 ~~----------~~~--~v~~~~~d~~~~-~-~~---~~~~D~v~~~~~l~~~-~~--~~~~l~~~~~~L~pgG~l~ 204 (288)
.. .+. .+.+..+|+.+. + +. ...+|.++...---.. ++ ...++..+.++++|||.+.
T Consensus 132 ~~~~~~~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 132 PLPLAGCHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp CCCCSEEEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred cccCCCceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 10 111 345667777542 2 21 4679999975421111 11 1678999999999999886
No 311
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.35 E-value=0.15 Score=49.36 Aligned_cols=116 Identities=12% Similarity=0.160 Sum_probs=64.8
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhh-hhhhhhcccccccCCCceEEEEeC---ChhHHHHHHHH-----------hhhc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSI-KRRALQDVLEDDLQEETRIYVCDI---NPNMLNVGKKR-----------ALER 147 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~D~---s~~~~~~a~~~-----------~~~~ 147 (288)
+.-+|+|+|.|+|.......+..... ..+| .......+++++|. +++.+..+-.. ...+
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p------~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~ 139 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHP------QAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQW 139 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCT------TSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHC
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCc------CCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhC
Confidence 34589999999999887776664200 0000 00001246889998 66666533321 1112
Q ss_pred CCC----------C--CceEEEEcccccC-C-CC---CCCeeEEEeccccccc-cC--HHHHHHHHHhhccCCcEEE
Q 036563 148 GYP----------D--KSLLWVEGDAEAL-C-FE---DSTMDGYTIAFGIRNV-TH--IEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 148 ~~~----------~--~~v~~~~~d~~~~-~-~~---~~~~D~v~~~~~l~~~-~~--~~~~l~~~~~~L~pgG~l~ 204 (288)
... + -.+.+..+|+.+. + +. ...+|+++...--... ++ -..+++.+.++++|||.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 216 (676)
T 3ps9_A 140 PMPLPGCHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA 216 (676)
T ss_dssp CCCCSEEEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEE
T ss_pred cccCCCceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 110 0 1233455665442 2 11 3579999874421111 12 2668999999999999986
No 312
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.35 E-value=0.078 Score=47.76 Aligned_cols=105 Identities=19% Similarity=0.179 Sum_probs=68.0
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-+|+|. |..+..+++..+ + +++++|.+++.++.+++. + .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G------------------a~~Vi~~~~~~~~~~~a~~l----G-----a 231 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLG------------------AACVIVGDQNPERLKLLSDA----G-----F 231 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHT------------------CSEEEEEESCHHHHHHHHTT----T-----C
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCEEEEEcCCHHHHHHHHHc----C-----C
Confidence 445667889999999986 888888888763 5 899999999888776532 2 1
Q ss_pred EEEEcccccC------CC-CCCCeeEEEeccccccc--------cCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEGDAEAL------CF-EDSTMDGYTIAFGIRNV--------THIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d~~~~------~~-~~~~~D~v~~~~~l~~~--------~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
..+...-.+. .. ....+|+|+-...-... .+....+....+.|+++|+++++..
T Consensus 232 ~~i~~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 232 ETIDLRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp EEEETTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred cEEcCCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 2332211111 01 12259999854432210 0123468888999999999986543
No 313
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.32 E-value=0.14 Score=46.01 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=56.8
Q ss_pred CeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccC
Q 036563 85 MKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEAL 164 (288)
Q Consensus 85 ~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~ 164 (288)
.+++|+-||.|.++.-+.+.. -..+.++|+++.+.+..+.+. ++..++.+|+.++
T Consensus 3 ~~vidLFsG~GGlslG~~~aG------------------~~~v~avE~d~~a~~t~~~N~-------~~~~~~~~DI~~~ 57 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG------------------FDVKMAVEIDQHAINTHAINF-------PRSLHVQEDVSLL 57 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT------------------CEEEEEECSCHHHHHHHHHHC-------TTSEEECCCGGGC
T ss_pred CeEEEEccCcCHHHHHHHHCC------------------CcEEEEEeCCHHHHHHHHHhC-------CCCceEecChhhc
Confidence 589999999999998887763 245779999999888777664 3567788898776
Q ss_pred C---C-----CCCCeeEEEeccccccc
Q 036563 165 C---F-----EDSTMDGYTIAFGIRNV 183 (288)
Q Consensus 165 ~---~-----~~~~~D~v~~~~~l~~~ 183 (288)
. + ....+|+++.....+.+
T Consensus 58 ~~~~~~~~~~~~~~~D~i~ggpPCQ~f 84 (376)
T 3g7u_A 58 NAEIIKGFFKNDMPIDGIIGGPPCQGF 84 (376)
T ss_dssp CHHHHHHHHCSCCCCCEEEECCCCCTT
T ss_pred CHHHHHhhcccCCCeeEEEecCCCCCc
Confidence 3 1 24579999988776555
No 314
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.14 E-value=0.16 Score=44.68 Aligned_cols=95 Identities=15% Similarity=0.105 Sum_probs=65.4
Q ss_pred hcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEE
Q 036563 78 KLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLW 156 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~ 156 (288)
.....++.+||-+|+|. |..+..+++.. +.+++++|.+++.++.+++. +. . ..
T Consensus 171 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~------------------Ga~Vi~~~~~~~~~~~~~~l----Ga---~-~v 224 (348)
T 3two_A 171 FSKVTKGTKVGVAGFGGLGSMAVKYAVAM------------------GAEVSVFARNEHKKQDALSM----GV---K-HF 224 (348)
T ss_dssp HTTCCTTCEEEEESCSHHHHHHHHHHHHT------------------TCEEEEECSSSTTHHHHHHT----TC---S-EE
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHC------------------CCeEEEEeCCHHHHHHHHhc----CC---C-ee
Confidence 34667889999999976 77888888775 37999999999988877652 21 1 22
Q ss_pred EEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 157 VEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 157 ~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+ .+...+ . ..+|+|+-...- ...+....+.|+++|+++++..
T Consensus 225 ~-~~~~~~--~-~~~D~vid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 225 Y-TDPKQC--K-EELDFIISTIPT------HYDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp E-SSGGGC--C-SCEEEEEECCCS------CCCHHHHHTTEEEEEEEEECCC
T ss_pred c-CCHHHH--h-cCCCEEEECCCc------HHHHHHHHHHHhcCCEEEEECC
Confidence 2 333322 2 279999853321 1246678899999999997644
No 315
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.97 E-value=0.11 Score=45.94 Aligned_cols=100 Identities=15% Similarity=0.127 Sum_probs=66.2
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-+|+|. |..+..+++..+ . +|+++|.+++.++.+++. +. .
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G------------------a~~Vi~~~~~~~~~~~~~~l----Ga----~ 213 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLG------------------AGRIFAVGSRKHCCDIALEY----GA----T 213 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTT------------------CSSEEEECCCHHHHHHHHHH----TC----C
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CcEEEEECCCHHHHHHHHHh----CC----c
Confidence 556677889999999876 777777777753 5 899999999888877654 21 1
Q ss_pred EEEEcccccC-----C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEGDAEAL-----C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d~~~~-----~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.++..+-.++ . .....+|+|+-... ....+..+.+.|+++|+++++..
T Consensus 214 ~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g------~~~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 214 DIINYKNGDIVEQILKATDGKGVDKVVIAGG------DVHTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp EEECGGGSCHHHHHHHHTTTCCEEEEEECSS------CTTHHHHHHHHEEEEEEEEECCC
T ss_pred eEEcCCCcCHHHHHHHHcCCCCCCEEEECCC------ChHHHHHHHHHHhcCCEEEEecc
Confidence 2222111111 0 12236999984322 12457788999999999987544
No 316
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.97 E-value=0.075 Score=48.27 Aligned_cols=64 Identities=11% Similarity=0.089 Sum_probs=48.3
Q ss_pred CCCCCeEEEecCCccHHHHHHHH-hhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh--c-CCCCCceEE
Q 036563 81 PFPGMKHLDVAGGTGDVAFRILD-TVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE--R-GYPDKSLLW 156 (288)
Q Consensus 81 ~~~~~~vLDiG~G~G~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~--~-~~~~~~v~~ 156 (288)
..++..++|+||+.|.++..++. ..+ +..+|+++|++|...+..+++... + +.. +++.+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~----------------~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~-~~v~~ 286 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKG----------------KFERVWMIEPDRINLQTLQNVLRRYTDTNFA-SRITV 286 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTS----------------CCSEEEEECCCHHHHHHHHHHHHHTTTSTTG-GGEEE
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcC----------------CCCEEEEEcCCHHHHHHHHHHHHhhhccCCC-CCEEE
Confidence 36788999999999999998884 432 237999999999999999998876 1 221 36666
Q ss_pred EEccc
Q 036563 157 VEGDA 161 (288)
Q Consensus 157 ~~~d~ 161 (288)
+..-+
T Consensus 287 ~~~al 291 (409)
T 2py6_A 287 HGCGA 291 (409)
T ss_dssp ECSEE
T ss_pred EEeEE
Confidence 65443
No 317
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.97 E-value=0.2 Score=44.59 Aligned_cols=100 Identities=13% Similarity=0.173 Sum_probs=66.7
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||=+|+|. |..+..+++..+ + +++++|.++..++.+++. +..
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G------------------a~~Vi~~~~~~~~~~~a~~l----Ga~---- 229 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAG------------------ATTVILSTRQATKRRLAEEV----GAT---- 229 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT------------------CSEEEEECSCHHHHHHHHHH----TCS----
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCEEEEECCCHHHHHHHHHc----CCC----
Confidence 445667788999999875 777777877753 5 899999999888877653 211
Q ss_pred EEEEc---cccc-C-C---CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEG---DAEA-L-C---FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~---d~~~-~-~---~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
..+.. |..+ . . ...+.+|+|+-.. .....+..+.+.|+++|.++++..
T Consensus 230 ~vi~~~~~~~~~~i~~~~~~~~gg~Dvvid~~------G~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 230 ATVDPSAGDVVEAIAGPVGLVPGGVDVVIECA------GVAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp EEECTTSSCHHHHHHSTTSSSTTCEEEEEECS------CCHHHHHHHHHHEEEEEEEEECSC
T ss_pred EEECCCCcCHHHHHHhhhhccCCCCCEEEECC------CCHHHHHHHHHHhccCCEEEEEec
Confidence 12211 1111 0 1 2234799998432 224568889999999999987544
No 318
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.91 E-value=0.12 Score=45.84 Aligned_cols=100 Identities=17% Similarity=0.214 Sum_probs=65.3
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-+|+|. |..+..+++..+ . +++++|.+++.++.+++. +..
T Consensus 165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G------------------a~~Vi~~~~~~~~~~~a~~l----Ga~---- 218 (356)
T 1pl8_A 165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMG------------------AAQVVVTDLSATRLSKAKEI----GAD---- 218 (356)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTT------------------CSEEEEEESCHHHHHHHHHT----TCS----
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCEEEEECCCHHHHHHHHHh----CCC----
Confidence 344567788999999876 778888887753 5 899999999888777642 211
Q ss_pred EEEEcc---ccc----C-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEGD---AEA----L-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d---~~~----~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
..+..+ ..+ + ......+|+|+-.-. ....+....+.|+++|+++++..
T Consensus 219 ~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 219 LVLQISKESPQEIARKVEGQLGCKPEVTIECTG------AEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp EEEECSSCCHHHHHHHHHHHHTSCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred EEEcCcccccchHHHHHHHHhCCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEEec
Confidence 222221 011 1 011146899874322 23467888999999999987543
No 319
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.87 E-value=0.42 Score=41.82 Aligned_cols=105 Identities=11% Similarity=0.046 Sum_probs=66.1
Q ss_pred HhhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 76 VSKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 76 ~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
.......++.+||=.|+|. |..+..+++..+ ...++++|.+++.++.+++. +. .
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-----------------~~~vi~~~~~~~k~~~a~~l----Ga----~ 207 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALG-----------------AKSVTAIDISSEKLALAKSF----GA----M 207 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTT-----------------CSEEEEEESCHHHHHHHHHT----TC----S
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcC-----------------CcEEEEEechHHHHHHHHHc----CC----e
Confidence 3455667788999999976 666777777653 24678999999888877653 21 2
Q ss_pred EEEEcccccCC------CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccCC
Q 036563 155 LWVEGDAEALC------FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSHV 211 (288)
Q Consensus 155 ~~~~~d~~~~~------~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 211 (288)
..+...-.+.. -....+|+|+-.. .....++...+.|+++|.+++......
T Consensus 208 ~~i~~~~~~~~~~~~~~~~~~g~d~v~d~~------G~~~~~~~~~~~l~~~G~~v~~g~~~~ 264 (346)
T 4a2c_A 208 QTFNSSEMSAPQMQSVLRELRFNQLILETA------GVPQTVELAVEIAGPHAQLALVGTLHQ 264 (346)
T ss_dssp EEEETTTSCHHHHHHHHGGGCSSEEEEECS------CSHHHHHHHHHHCCTTCEEEECCCCSS
T ss_pred EEEeCCCCCHHHHHHhhcccCCcccccccc------cccchhhhhhheecCCeEEEEEeccCC
Confidence 22222111110 1123578876432 234567888999999999997654443
No 320
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.78 E-value=0.19 Score=40.22 Aligned_cols=98 Identities=19% Similarity=0.227 Sum_probs=60.4
Q ss_pred hhcCCCCCCeEEEecC--CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAG--GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||..|+ |.|.....++... +.+++++|.+++..+.+++ .+. .
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~------------------G~~V~~~~~~~~~~~~~~~----~g~---~- 85 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMI------------------GARIYTTAGSDAKREMLSR----LGV---E- 85 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHH------------------TCEEEEEESSHHHHHHHHT----TCC---S-
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHc------------------CCEEEEEeCCHHHHHHHHH----cCC---C-
Confidence 3445677889999995 3456666665554 3789999999887765543 221 1
Q ss_pred EEEEcccccC-----C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 155 LWVEGDAEAL-----C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 155 ~~~~~d~~~~-----~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.....+-.+. . .....+|+++.+.. ...++.+.+.|+++|+++++.
T Consensus 86 ~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 86 YVGDSRSVDFADEILELTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EEEETTCSTHHHHHHHHTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECS
T ss_pred EEeeCCcHHHHHHHHHHhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEc
Confidence 1121111110 0 11236999985432 245788899999999998754
No 321
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.78 E-value=0.23 Score=43.68 Aligned_cols=76 Identities=11% Similarity=0.048 Sum_probs=53.8
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceE-EEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRI-YVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
..+++|+-||.|.++..+.+..- +...+ .++|+++.+.+.-+.+... . +..+|+.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~----------------~~~~v~~a~e~d~~a~~ty~~N~~~-------~-~~~~DI~ 65 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSI----------------NINATFIPFDINEIANKIYSKNFKE-------E-VQVKNLD 65 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSC----------------CCCEEEEEECCCHHHHHHHHHHHCC-------C-CBCCCTT
T ss_pred CCEEEEECCChhHHHHHHHHcCC----------------CceEEEEEEECCHHHHHHHHHHCCC-------C-cccCChh
Confidence 46899999999999988876520 01345 7999999998888777632 2 4567777
Q ss_pred cCC---CCCCCeeEEEeccccccc
Q 036563 163 ALC---FEDSTMDGYTIAFGIRNV 183 (288)
Q Consensus 163 ~~~---~~~~~~D~v~~~~~l~~~ 183 (288)
++. ++...+|+++.....+.+
T Consensus 66 ~~~~~~i~~~~~Dil~ggpPCQ~f 89 (327)
T 3qv2_A 66 SISIKQIESLNCNTWFMSPPCQPY 89 (327)
T ss_dssp TCCHHHHHHTCCCEEEECCCCTTC
T ss_pred hcCHHHhccCCCCEEEecCCccCc
Confidence 663 222358999988776555
No 322
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.64 E-value=0.18 Score=44.25 Aligned_cols=100 Identities=22% Similarity=0.239 Sum_probs=66.8
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
......++.+||-+|+|. |..+..+++..+ .+++++|.+++.++.+++. +. -.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G------------------a~Vi~~~~~~~~~~~~~~l----Ga----~~ 213 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMG------------------LRVAAVDIDDAKLNLARRL----GA----EV 213 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHTT------------------CEEEEEESCHHHHHHHHHT----TC----SE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHCC------------------CeEEEEeCCHHHHHHHHHc----CC----CE
Confidence 444667888999999986 888888888763 7999999999988877653 21 12
Q ss_pred EEEcccccC----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 156 WVEGDAEAL----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 156 ~~~~d~~~~----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+...-.++ ....+.+|.++-... ....++.+.+.|+++|.++++..
T Consensus 214 ~i~~~~~~~~~~~~~~~g~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 214 AVNARDTDPAAWLQKEIGGAHGVLVTAV------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp EEETTTSCHHHHHHHHHSSEEEEEESSC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred EEeCCCcCHHHHHHHhCCCCCEEEEeCC------CHHHHHHHHHHhccCCEEEEeCC
Confidence 222211111 001136888874322 24568888999999999987543
No 323
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.53 E-value=0.25 Score=44.33 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=68.0
Q ss_pred hcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 78 KLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
.....++.+||-+|+|. |..+..+++..+ + +++++|.+++.++.+++. + ..
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~G------------------a~~Vi~~~~~~~~~~~a~~l----G-----a~ 232 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLG------------------AAVVIVGDLNPARLAHAKAQ----G-----FE 232 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTT------------------CSEEEEEESCHHHHHHHHHT----T-----CE
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCC------------------CCeEEEEcCCHHHHHHHHHc----C-----Cc
Confidence 45667888999999876 888888888763 5 799999999988877642 2 12
Q ss_pred EEEccccc-----C-CC-CCCCeeEEEeccccc---------cccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 156 WVEGDAEA-----L-CF-EDSTMDGYTIAFGIR---------NVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 156 ~~~~d~~~-----~-~~-~~~~~D~v~~~~~l~---------~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.+...-.+ + .. ....+|+|+-.-.-. +..++...++...+.|+++|+++++.
T Consensus 233 ~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 233 IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 22221111 1 01 123699998644321 12234457888999999999998754
No 324
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.36 E-value=0.05 Score=48.22 Aligned_cols=76 Identities=13% Similarity=0.159 Sum_probs=54.1
Q ss_pred CeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccC
Q 036563 85 MKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEAL 164 (288)
Q Consensus 85 ~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~ 164 (288)
.+++|+.||.|.++..+..... ....+.++|+++.+++..+.+.. +..++.+|+.++
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~----------------~~~~v~~~E~d~~a~~~~~~N~~-------~~~~~~~Di~~~ 59 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCI----------------PAQVVAAIDVNTVANEVYKYNFP-------HTQLLAKTIEGI 59 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTC----------------SEEEEEEECCCHHHHHHHHHHCT-------TSCEECSCGGGC
T ss_pred CeEEEeCcCccHHHHHHHHCCC----------------CceEEEEEeCCHHHHHHHHHhcc-------ccccccCCHHHc
Confidence 5899999999999988877620 01468999999999998888763 345677888776
Q ss_pred C---CCCCCeeEEEeccccccc
Q 036563 165 C---FEDSTMDGYTIAFGIRNV 183 (288)
Q Consensus 165 ~---~~~~~~D~v~~~~~l~~~ 183 (288)
. ++...+|+++.....+.+
T Consensus 60 ~~~~~~~~~~D~l~~gpPCq~f 81 (343)
T 1g55_A 60 TLEEFDRLSFDMILMSPPCQPF 81 (343)
T ss_dssp CHHHHHHHCCSEEEECCC----
T ss_pred cHhHcCcCCcCEEEEcCCCcch
Confidence 3 111258999998775444
No 325
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.23 E-value=0.21 Score=44.55 Aligned_cols=102 Identities=20% Similarity=0.195 Sum_probs=67.1
Q ss_pred HHhhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 75 LVSKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 75 ~~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.......++.+||=+|+|. |..+..+++..+ . +|+++|.+++.++.+++. +..
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~G------------------a~~Vi~~~~~~~~~~~a~~l----Ga~-- 240 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAG------------------ASRIIGIDIDSKKYETAKKF----GVN-- 240 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHT------------------CSCEEEECSCTTHHHHHHTT----TCC--
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCeEEEEcCCHHHHHHHHHc----CCc--
Confidence 33555677888999999975 778888888763 5 899999999988877542 221
Q ss_pred ceEEEEcc--cccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCC-cEEEEEec
Q 036563 153 SLLWVEGD--AEAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRG-GRFLCLEL 208 (288)
Q Consensus 153 ~v~~~~~d--~~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 208 (288)
..+... -.++ ....+.+|+|+-... ....+..+.+.|+++ |+++++..
T Consensus 241 --~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~g------~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 241 --EFVNPKDHDKPIQEVIVDLTDGGVDYSFECIG------NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp --EEECGGGCSSCHHHHHHHHTTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred --EEEccccCchhHHHHHHHhcCCCCCEEEECCC------CHHHHHHHHHHhhccCCEEEEEcc
Confidence 222211 0111 112237999984322 245688899999997 99987554
No 326
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.19 E-value=0.3 Score=43.38 Aligned_cols=100 Identities=15% Similarity=0.072 Sum_probs=65.6
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+.....++.+||-+|+|. |..+..+++..+ + +|+++|.+++.++.+++. +..
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G------------------a~~Vi~~~~~~~~~~~a~~l----Ga~---- 238 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAG------------------ASRIIGVGTHKDKFPKAIEL----GAT---- 238 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHT------------------CSEEEEECSCGGGHHHHHHT----TCS----
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCeEEEECCCHHHHHHHHHc----CCc----
Confidence 445667888999999875 777788887763 5 899999999988877642 211
Q ss_pred EEEEcc-----ccc-C-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCC-cEEEEEec
Q 036563 155 LWVEGD-----AEA-L-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRG-GRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d-----~~~-~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 208 (288)
.++..+ +.+ + ....+.+|+|+-... ....+....+.|+++ |+++++..
T Consensus 239 ~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 239 ECLNPKDYDKPIYEVICEKTNGGVDYAVECAG------RIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp EEECGGGCSSCHHHHHHHHTTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred EEEecccccchHHHHHHHHhCCCCCEEEECCC------CHHHHHHHHHHHhcCCCEEEEEcc
Confidence 122111 110 0 111236999984322 245678889999999 99987543
No 327
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.18 E-value=0.23 Score=42.99 Aligned_cols=92 Identities=15% Similarity=0.164 Sum_probs=61.9
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
......++.+||=+|+|. |..+..+++..+ +++++++ +++.++.+++. + --.
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~G------------------a~Vi~~~-~~~~~~~~~~l----G----a~~ 188 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAG------------------YVVDLVS-ASLSQALAAKR----G----VRH 188 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHT------------------CEEEEEC-SSCCHHHHHHH----T----EEE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CEEEEEE-ChhhHHHHHHc----C----CCE
Confidence 556677889999999964 788888888764 7999999 88888887653 1 112
Q ss_pred EEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 156 WVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 156 ~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
.+. |.+.+ ...+|+|+-... . ..+..+.+.|+++|+++++
T Consensus 189 v~~-d~~~v---~~g~Dvv~d~~g-----~--~~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 189 LYR-EPSQV---TQKYFAIFDAVN-----S--QNAAALVPSLKANGHIICI 228 (315)
T ss_dssp EES-SGGGC---CSCEEEEECC--------------TTGGGEEEEEEEEEE
T ss_pred EEc-CHHHh---CCCccEEEECCC-----c--hhHHHHHHHhcCCCEEEEE
Confidence 222 42222 457999974322 1 1235678999999999876
No 328
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.17 E-value=0.45 Score=42.03 Aligned_cols=102 Identities=16% Similarity=0.201 Sum_probs=67.5
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCce-EEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETR-IYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||=+|+|. |..+..+++..+ .+ ++++|.+++.++.+++. ... -+
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G------------------a~~Vi~~~~~~~~~~~a~~l-~~~-----~~ 228 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAG------------------ACPLVITDIDEGRLKFAKEI-CPE-----VV 228 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTT------------------CCSEEEEESCHHHHHHHHHH-CTT-----CE
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCEEEEECCCHHHHHHHHHh-chh-----cc
Confidence 445667788999999876 778888888763 55 99999999998888765 211 12
Q ss_pred EEEEc-----cccc-C--CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEG-----DAEA-L--CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~-----d~~~-~--~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+... |..+ + ......+|+|+-... ....+..+.+.|+++|+++++..
T Consensus 229 ~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 229 THKVERLSAEESAKKIVESFGGIEPAVALECTG------VESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp EEECCSCCHHHHHHHHHHHTSSCCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECCC
T ss_pred cccccccchHHHHHHHHHHhCCCCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEEcc
Confidence 22211 1110 0 012346999984322 24467888999999999997644
No 329
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.08 E-value=0.38 Score=42.31 Aligned_cols=100 Identities=16% Similarity=0.182 Sum_probs=64.7
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
......++.+||-+|+|. |..+..+++.. +++++++|.+++.++.+++. +. . .
T Consensus 162 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~------------------Ga~Vi~~~~~~~~~~~~~~l----Ga---~-~ 215 (352)
T 1e3j_A 162 RRAGVQLGTTVLVIGAGPIGLVSVLAAKAY------------------GAFVVCTARSPRRLEVAKNC----GA---D-V 215 (352)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT------------------TCEEEEEESCHHHHHHHHHT----TC---S-E
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc------------------CCEEEEEcCCHHHHHHHHHh----CC---C-E
Confidence 344567788999999875 77777777775 36799999999888877642 21 1 2
Q ss_pred EEEccc-ccC----C--CC---CCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 156 WVEGDA-EAL----C--FE---DSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 156 ~~~~d~-~~~----~--~~---~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+..+- .+. . .. ...+|+|+-... ....++...+.|+++|+++++..
T Consensus 216 ~~~~~~~~~~~~~i~~~~~~~~g~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 216 TLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSG------NEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp EEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSC------CHHHHHHHHHHSCTTCEEEECSC
T ss_pred EEcCcccccHHHHHHHHhccccCCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEEec
Confidence 222110 111 0 11 246899874332 23467888999999999987543
No 330
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.04 E-value=0.42 Score=42.49 Aligned_cols=98 Identities=15% Similarity=0.133 Sum_probs=63.1
Q ss_pred cCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEE
Q 036563 79 LNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWV 157 (288)
Q Consensus 79 l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~ 157 (288)
....++.+||-+|+|. |..+..+++.. +++++++|.+++.++.+++. +. ..++
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~------------------Ga~Vi~~~~~~~~~~~a~~l----Ga----~~vi 243 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAM------------------GAHVVAFTTSEAKREAAKAL----GA----DEVV 243 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT------------------TCEEEEEESSGGGHHHHHHH----TC----SEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHHc----CC----cEEe
Confidence 4567788999999975 77777777775 37899999999988877652 21 1222
Q ss_pred Eccccc-CCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 158 EGDAEA-LCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 158 ~~d~~~-~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
...-.+ .......+|+|+-...- ...++...+.|+++|.++++..
T Consensus 244 ~~~~~~~~~~~~~g~Dvvid~~g~------~~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 244 NSRNADEMAAHLKSFDFILNTVAA------PHNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp ETTCHHHHHTTTTCEEEEEECCSS------CCCHHHHHTTEEEEEEEEECCC
T ss_pred ccccHHHHHHhhcCCCEEEECCCC------HHHHHHHHHHhccCCEEEEecc
Confidence 211111 00011469999854331 1235667899999999987543
No 331
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.94 E-value=0.4 Score=42.50 Aligned_cols=100 Identities=19% Similarity=0.175 Sum_probs=65.4
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-+|+|. |..+..+++..+ . +++++|.+++.++.+++. +..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~G------------------a~~Vi~~~~~~~~~~~~~~l----Ga~---- 237 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAG------------------ASRIIGVDINKDKFARAKEF----GAT---- 237 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHT------------------CSEEEEECSCGGGHHHHHHH----TCS----
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCeEEEEcCCHHHHHHHHHc----CCc----
Confidence 445667888999999875 777777777763 5 899999999988887643 211
Q ss_pred EEEEcc-----ccc-C-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCC-cEEEEEec
Q 036563 155 LWVEGD-----AEA-L-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRG-GRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d-----~~~-~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 208 (288)
.++... +.+ + ....+.+|+|+-... ....++.+.+.|+++ |+++++..
T Consensus 238 ~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 238 ECINPQDFSKPIQEVLIEMTDGGVDYSFECIG------NVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp EEECGGGCSSCHHHHHHHHTTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred eEeccccccccHHHHHHHHhCCCCCEEEECCC------cHHHHHHHHHhhccCCcEEEEEec
Confidence 122111 100 0 111236999874322 245678889999999 99987543
No 332
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.90 E-value=0.44 Score=42.19 Aligned_cols=100 Identities=14% Similarity=0.099 Sum_probs=66.2
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
+.....++.+||-+|+|. |..+..+++.. +++++++|.+++.++.+++. +. -.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~------------------Ga~Vi~~~~~~~~~~~~~~l----Ga----~~ 236 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT------------------GAEVIVTSSSREKLDRAFAL----GA----DH 236 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT------------------TCEEEEEESCHHHHHHHHHH----TC----SE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc------------------CCEEEEEecCchhHHHHHHc----CC----CE
Confidence 455667889999999876 77777777775 47999999999888877553 21 12
Q ss_pred EEEcccccC-----C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 156 WVEGDAEAL-----C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 156 ~~~~d~~~~-----~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
.+..+..++ . .....+|+|+-... ...+..+.+.|+++|.++++...
T Consensus 237 vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 237 GINRLEEDWVERVYALTGDRGADHILEIAG-------GAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EEETTTSCHHHHHHHHHTTCCEEEEEEETT-------SSCHHHHHHHEEEEEEEEEECCC
T ss_pred EEcCCcccHHHHHHHHhCCCCceEEEECCC-------hHHHHHHHHHhhcCCEEEEEecC
Confidence 222221111 0 12236999985443 12366778899999999986543
No 333
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=93.89 E-value=0.44 Score=41.68 Aligned_cols=101 Identities=19% Similarity=0.119 Sum_probs=64.6
Q ss_pred HHhhcCCCCCCeEEEecCC--ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 75 LVSKLNPFPGMKHLDVAGG--TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 75 ~~~~l~~~~~~~vLDiG~G--~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+.....++.+||-+|+| .|..+..+++..+ ++++++|.+++.++.+++. +.
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G------------------a~Vi~~~~~~~~~~~~~~l----ga--- 190 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQILN------------------FRLIAVTRNNKHTEELLRL----GA--- 190 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT------------------CEEEEEESSSTTHHHHHHH----TC---
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcC------------------CEEEEEeCCHHHHHHHHhC----CC---
Confidence 3455667888999999987 4777777777753 7999999999888877653 21
Q ss_pred ceEEEEcccccC-----C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 153 SLLWVEGDAEAL-----C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 153 ~v~~~~~d~~~~-----~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
-..+...-.++ . .....+|+++-+.. ... +....+.|+++|.++++..
T Consensus 191 -~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g------~~~-~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 191 -AYVIDTSTAPLYETVMELTNGIGADAAIDSIG------GPD-GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp -SEEEETTTSCHHHHHHHHTTTSCEEEEEESSC------HHH-HHHHHHTEEEEEEEEECCC
T ss_pred -cEEEeCCcccHHHHHHHHhCCCCCcEEEECCC------Chh-HHHHHHHhcCCCEEEEEee
Confidence 11222111111 0 12236999985332 122 2334589999999997644
No 334
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.64 E-value=0.82 Score=41.02 Aligned_cols=58 Identities=12% Similarity=0.212 Sum_probs=39.3
Q ss_pred cCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh
Q 036563 79 LNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE 146 (288)
Q Consensus 79 l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~ 146 (288)
+..+.+..|+|+|+|+|.++..+++..... . +.....+|+.+|+|+...+.=++.+..
T Consensus 76 ~g~p~~~~ivElGaG~GtLa~diL~~l~~~-p---------~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 76 ADEPQTLRLIEIGPGRGTMMADALRALRVL-P---------ILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp TTCCSSEEEEEECCTTSHHHHHHHHHHTTS-H---------HHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred cCCCCCcEEEEECCCcchHHHHHHHHHHhC-C---------ccccccEEEEEecCHHHHHHHHHHhcC
Confidence 344445679999999999999998775210 0 000246899999999877755555433
No 335
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.63 E-value=0.36 Score=42.85 Aligned_cols=100 Identities=19% Similarity=0.200 Sum_probs=65.0
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-+|+|. |..+..+++..+ . +++++|.+++.++.+++. +..
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G------------------a~~Vi~~~~~~~~~~~~~~l----Ga~---- 239 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAG------------------AKRIIAVDLNPDKFEKAKVF----GAT---- 239 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTT------------------CSEEEEECSCGGGHHHHHHT----TCC----
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCEEEEEcCCHHHHHHHHHh----CCc----
Confidence 445667888999999875 777777777753 5 899999999988877642 211
Q ss_pred EEEEccc--ccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCC-cEEEEEec
Q 036563 155 LWVEGDA--EAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRG-GRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d~--~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 208 (288)
..+...- .++ ....+.+|+|+-... ....+..+.+.|+++ |+++++..
T Consensus 240 ~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 240 DFVNPNDHSEPISQVLSKMTNGGVDFSLECVG------NVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp EEECGGGCSSCHHHHHHHHHTSCBSEEEECSC------CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred eEEeccccchhHHHHHHHHhCCCCCEEEECCC------CHHHHHHHHHHhhcCCcEEEEEcC
Confidence 1221110 011 011236899874322 245678889999999 99987543
No 336
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.62 E-value=0.35 Score=42.95 Aligned_cols=101 Identities=18% Similarity=0.131 Sum_probs=65.5
Q ss_pred HhhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 76 VSKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 76 ~~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
.......++.+||-+|+|. |..+..+++..+ + +|+++|.+++.++.+++. +..
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G------------------a~~Vi~~~~~~~~~~~a~~l----Ga~--- 242 (376)
T 1e3i_A 188 INTAKVTPGSTCAVFGLGCVGLSAIIGCKIAG------------------ASRIIAIDINGEKFPKAKAL----GAT--- 242 (376)
T ss_dssp HTTSCCCTTCEEEEECCSHHHHHHHHHHHHTT------------------CSEEEEECSCGGGHHHHHHT----TCS---
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCeEEEEcCCHHHHHHHHHh----CCc---
Confidence 3445667888999999875 777777777753 5 899999999988877542 211
Q ss_pred eEEEEcc-----ccc-C-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCC-cEEEEEec
Q 036563 154 LLWVEGD-----AEA-L-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRG-GRFLCLEL 208 (288)
Q Consensus 154 v~~~~~d-----~~~-~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 208 (288)
..+... +.+ + ....+.+|+|+-... ....+..+.+.|+++ |+++++..
T Consensus 243 -~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G------~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 243 -DCLNPRELDKPVQDVITELTAGGVDYSLDCAG------TAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp -EEECGGGCSSCHHHHHHHHHTSCBSEEEESSC------CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred -EEEccccccchHHHHHHHHhCCCccEEEECCC------CHHHHHHHHHHhhcCCCEEEEECC
Confidence 122111 100 0 011236899874322 245678889999999 99987544
No 337
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.56 E-value=0.45 Score=42.25 Aligned_cols=100 Identities=16% Similarity=0.103 Sum_probs=64.7
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-+|+|. |..+..+++..+ . +++++|.+++.++.+++. +. .
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~G------------------a~~Vi~~~~~~~~~~~~~~l----Ga----~ 238 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAG------------------AARIIGVDINKDKFAKAKEV----GA----T 238 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTT------------------CSEEEEECSCGGGHHHHHHT----TC----S
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCeEEEEcCCHHHHHHHHHh----CC----c
Confidence 445667888999999875 777777777753 5 899999999988877542 21 1
Q ss_pred EEEEcc-----ccc-C-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCC-cEEEEEec
Q 036563 155 LWVEGD-----AEA-L-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRG-GRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d-----~~~-~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~~ 208 (288)
..+..+ +.+ + ....+.+|+|+-... ....+....+.|+++ |+++++..
T Consensus 239 ~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g------~~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG------RLDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp EEECGGGCSSCHHHHHHHHTTSCBSEEEECSC------CHHHHHHHHHHBCTTTCEEEECSC
T ss_pred eEecccccchhHHHHHHHHhCCCCcEEEECCC------CHHHHHHHHHHhhcCCcEEEEecc
Confidence 122111 100 0 111236999874322 235678889999999 99987543
No 338
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.55 E-value=2.3 Score=41.11 Aligned_cols=165 Identities=13% Similarity=0.200 Sum_probs=90.6
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhc-------------CC
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALER-------------GY 149 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~-------------~~ 149 (288)
+...|+-+|||.=.....+....+... ...+....++=+|. |+.++.=++.+... ..
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~---------~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~ 176 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQS---------QQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDY 176 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGG---------GGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSS
T ss_pred CCcEEEEcccccCcceeeeeccCcccc---------cccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhcccccccc
Confidence 345799999998777777655420000 00001345666665 44433333333211 00
Q ss_pred C---------CCceEEEEcccccCC----------C-CCCCeeEEEecccccccc--CHHHHHHHHHhhccCCcEEEEEe
Q 036563 150 P---------DKSLLWVEGDAEALC----------F-EDSTMDGYTIAFGIRNVT--HIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 150 ~---------~~~v~~~~~d~~~~~----------~-~~~~~D~v~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
. ..+..++..|+.+.. + ..+..-++++-.++.+++ ...++|+.+.++ ++|.+++.|
T Consensus 177 ~~~~~~~~~~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e 254 (695)
T 2zwa_A 177 VDDSNVDFLTTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILE 254 (695)
T ss_dssp CSCTTCCCEECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEE
T ss_pred ccccccccccCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEE
Confidence 0 126788888887631 2 333455666667777775 345678777754 678777777
Q ss_pred ccCC---ChHHHHHHHHHhhccccccccccccCCCcchhhhHHHHhcCCChHHHHHHHHHcCCcEEEEEEe
Q 036563 208 LSHV---DIPVFKELYDYYSFSVIPAIGELVAGDRGSYQYLVESVRRFPPQEKFAAMISDAGFQKVEYENL 275 (288)
Q Consensus 208 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~~ 275 (288)
...| ...+-+.+...+.. .|..+ ..+..+++.++..+.|.++||+.+...++
T Consensus 255 ~~~~~~~~d~f~~~m~~~~~~-----~g~~l-----------~~~~~~~~~~~~~~~~~~~Gw~~v~~~~~ 309 (695)
T 2zwa_A 255 QLIPKGPFEPFSKQMLAHFKR-----NDSPL-----------QSVLKYNTIESQVQRFNKLGFAYVNVGDM 309 (695)
T ss_dssp ECCTTCTTSHHHHHHHHHHHH-----TTCCC-----------CGGGTCCSHHHHHHHHHHTTCCEEEEEEH
T ss_pred eecCCCCCChHHHHHHHHHHH-----cCCCC-----------CccccCCCHHHHHHHHHHCCCCCcceeeH
Confidence 6555 34443433333211 11100 01123568899999999999998766543
No 339
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=93.53 E-value=0.59 Score=40.58 Aligned_cols=99 Identities=13% Similarity=0.088 Sum_probs=64.9
Q ss_pred hhcCCCCCCeEEEec-CC-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVA-GG-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG-~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
.....+++.+||-.| +| .|..+..+++..+ +++++++.+++.++.+++. +. -
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G------------------a~Vi~~~~~~~~~~~~~~~----Ga----~ 187 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKALG------------------AKLIGTVSSPEKAAHAKAL----GA----W 187 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHHT------------------CEEEEEESSHHHHHHHHHH----TC----S
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCC------------------CEEEEEeCCHHHHHHHHHc----CC----C
Confidence 445667888999998 34 4777777777763 7999999999888877643 21 1
Q ss_pred EEEEcccccC------CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEGDAEAL------CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d~~~~------~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
..+..+-.++ ......+|+++-+..- ..+....+.|+++|+++++..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 188 ETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEEETTTSCHHHHHHHHTTTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECCC
T ss_pred EEEeCCCccHHHHHHHHhCCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEec
Confidence 2222211111 0123469998854331 356778899999999997644
No 340
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.41 E-value=0.18 Score=44.13 Aligned_cols=56 Identities=14% Similarity=0.263 Sum_probs=44.9
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERG 148 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~ 148 (288)
+.+++... .++..|||.-||+|..+..+.+. +.+++++|+++...+.+++++...+
T Consensus 243 ~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~-------------------gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 243 EFFIRMLT-EPDDLVVDIFGGSNTTGLVAERE-------------------SRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp HHHHHHHC-CTTCEEEETTCTTCHHHHHHHHT-------------------TCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred HHHHHHhC-CCCCEEEECCCCCCHHHHHHHHc-------------------CCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 34444443 56789999999999999887776 3899999999999999999876554
No 341
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=93.20 E-value=0.3 Score=42.85 Aligned_cols=73 Identities=16% Similarity=0.191 Sum_probs=53.3
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+.+++|+.||.|.++..+.... ...+.++|+++...+..+.+.... . .+|+.+
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG------------------~~~v~~~e~d~~a~~t~~~N~~~~-------~--~~Di~~ 63 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG------------------AECVYSNEWDKYAQEVYEMNFGEK-------P--EGDITQ 63 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT------------------CEEEEEECCCHHHHHHHHHHHSCC-------C--BSCGGG
T ss_pred CCcEEEECCCcCHHHHHHHHCC------------------CeEEEEEeCCHHHHHHHHHHcCCC-------C--cCCHHH
Confidence 4689999999999998887752 256789999999988888776432 1 577776
Q ss_pred CCC-CCCCeeEEEeccccccc
Q 036563 164 LCF-EDSTMDGYTIAFGIRNV 183 (288)
Q Consensus 164 ~~~-~~~~~D~v~~~~~l~~~ 183 (288)
+.. .-..+|+++.....+.+
T Consensus 64 ~~~~~~~~~D~l~~gpPCQ~f 84 (327)
T 2c7p_A 64 VNEKTIPDHDILCAGFPCQAF 84 (327)
T ss_dssp SCGGGSCCCSEEEEECCCTTT
T ss_pred cCHhhCCCCCEEEECCCCCCc
Confidence 531 11258999987765544
No 342
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=93.18 E-value=0.77 Score=40.61 Aligned_cols=93 Identities=17% Similarity=0.159 Sum_probs=61.6
Q ss_pred CCCeEEEec-CCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEc-
Q 036563 83 PGMKHLDVA-GGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEG- 159 (288)
Q Consensus 83 ~~~~vLDiG-~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~- 159 (288)
++.+||=+| +|. |..+..+++.. .+.+++++|.+++.++.+++. +.. .++..
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~-----------------~g~~Vi~~~~~~~~~~~~~~l----Gad----~vi~~~ 225 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQR-----------------TDLTVIATASRPETQEWVKSL----GAH----HVIDHS 225 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHH-----------------CCSEEEEECSSHHHHHHHHHT----TCS----EEECTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHh-----------------cCCEEEEEeCCHHHHHHHHHc----CCC----EEEeCC
Confidence 677899998 554 88888888864 248999999999888877642 211 12211
Q ss_pred -ccc-cC-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 160 -DAE-AL-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 160 -d~~-~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
+.. .+ ....+.+|+|+-.. .....+..+.+.|+++|+++++
T Consensus 226 ~~~~~~v~~~~~~g~Dvvid~~------g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 226 KPLAAEVAALGLGAPAFVFSTT------HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp SCHHHHHHTTCSCCEEEEEECS------CHHHHHHHHHHHSCTTCEEEEC
T ss_pred CCHHHHHHHhcCCCceEEEECC------CchhhHHHHHHHhcCCCEEEEE
Confidence 110 01 12334799887422 2345788899999999999875
No 343
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.12 E-value=0.57 Score=40.81 Aligned_cols=102 Identities=15% Similarity=0.047 Sum_probs=65.4
Q ss_pred HHhhcCCCCCCeEEEecC--CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 75 LVSKLNPFPGMKHLDVAG--GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 75 ~~~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.+.....++.+||-.|+ |.|..+..+++.. ++++++++.+++.++.+.+.+ +.
T Consensus 141 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~------------------Ga~Vi~~~~~~~~~~~~~~~~---g~--- 196 (336)
T 4b7c_A 141 LLDVGQPKNGETVVISGAAGAVGSVAGQIARLK------------------GCRVVGIAGGAEKCRFLVEEL---GF--- 196 (336)
T ss_dssp HHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHHTT---CC---
T ss_pred HHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHHHc---CC---
Confidence 335566778899999998 3477777777765 479999999998777663332 21
Q ss_pred ceEEEEcccccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 153 SLLWVEGDAEAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 153 ~v~~~~~d~~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
...+...-.+. ....+.+|+++-+.. ...+..+.+.|+++|+++++..
T Consensus 197 -~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 197 -DGAIDYKNEDLAAGLKRECPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp -SEEEETTTSCHHHHHHHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred -CEEEECCCHHHHHHHHHhcCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEEee
Confidence 11222111111 011346999875433 1368888999999999987543
No 344
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=93.11 E-value=0.22 Score=43.64 Aligned_cols=57 Identities=23% Similarity=0.262 Sum_probs=44.0
Q ss_pred HHHHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCCh---hHHHHHHHHhhhc
Q 036563 71 WKDRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINP---NMLNVGKKRALER 147 (288)
Q Consensus 71 ~~~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~---~~~~~a~~~~~~~ 147 (288)
+.+.++.... .++..|||.-||+|..+.++.+. +.+++++|+++ ...+.+++++...
T Consensus 231 l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~-------------------~r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 231 VIERLVRALS-HPGSTVLDFFAGSGVTARVAIQE-------------------GRNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp HHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHH-------------------TCEEEEEESSTHHHHHHHHHHHHC---
T ss_pred HHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHc-------------------CCcEEEEECCccHHHHHHHHHHHHHHc
Confidence 3344555443 46789999999999999888876 38999999999 9999999887554
No 345
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=93.09 E-value=0.58 Score=40.75 Aligned_cols=99 Identities=17% Similarity=0.185 Sum_probs=63.6
Q ss_pred hhcCCCCCCeEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-+|+ | .|..+..+++.. ++++++++.+++.++.+++. +. -
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~------------------Ga~Vi~~~~~~~~~~~~~~~----ga----~ 195 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMK------------------GAHTIAVASTDEKLKIAKEY----GA----E 195 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHHT----TC----S
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHHc----CC----c
Confidence 3445678889999994 3 467777777765 47999999999888766542 21 1
Q ss_pred EEEEcccccC-----C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEGDAEAL-----C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d~~~~-----~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
..+..+-.++ . .....+|+++-+..- ..+..+.+.|+++|.++++..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 196 YLINASKEDILRQVLKFTNGKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp EEEETTTSCHHHHHHHHTTTSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred EEEeCCCchHHHHHHHHhCCCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 2222211111 0 123469999854431 357778899999999987543
No 346
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.07 E-value=0.77 Score=41.23 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=61.6
Q ss_pred CCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCceEEE
Q 036563 80 NPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSLLWV 157 (288)
Q Consensus 80 ~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~ 157 (288)
...++.+||=+|+|. |..+..+++..+ . +++++|.++..++.+++. +. -.++
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~G------------------a~~Vi~~~~~~~~~~~~~~l----Ga----~~vi 263 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAG------------------ASKVILSEPSEVRRNLAKEL----GA----DHVI 263 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT------------------CSEEEEECSCHHHHHHHHHH----TC----SEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC------------------CCEEEEECCCHHHHHHHHHc----CC----CEEE
Confidence 567788999999875 777777777753 5 899999999888877654 21 1222
Q ss_pred EcccccC-----C-CCCCCeeEEEeccccccccCHHHHHHHHHhhc----cCCcEEEEEecc
Q 036563 158 EGDAEAL-----C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVL----KRGGRFLCLELS 209 (288)
Q Consensus 158 ~~d~~~~-----~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L----~pgG~l~i~~~~ 209 (288)
..+-.++ . .....+|+|+-.. ......+..+.+.| +++|+++++...
T Consensus 264 ~~~~~~~~~~i~~~t~g~g~D~vid~~-----g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 264 DPTKENFVEAVLDYTNGLGAKLFLEAT-----GVPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp CTTTSCHHHHHHHHTTTCCCSEEEECS-----SCHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred cCCCCCHHHHHHHHhCCCCCCEEEECC-----CCcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 2111111 0 1223699997432 22323445555555 999999975443
No 347
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.00 E-value=0.32 Score=42.63 Aligned_cols=97 Identities=11% Similarity=0.020 Sum_probs=63.0
Q ss_pred CCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEE
Q 036563 80 NPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVE 158 (288)
Q Consensus 80 ~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~ 158 (288)
.. ++.+||-+|+|. |..+..+++... ++.+++++|.+++.++.+++. +. ..++.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~----------------~Ga~Vi~~~~~~~~~~~~~~l----Ga----~~vi~ 222 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALM----------------KNITIVGISRSKKHRDFALEL----GA----DYVSE 222 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHC----------------TTCEEEEECSCHHHHHHHHHH----TC----SEEEC
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhc----------------CCCEEEEEeCCHHHHHHHHHh----CC----CEEec
Confidence 45 788999999975 777777777750 137899999999888877653 21 11221
Q ss_pred c----cc-ccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 159 G----DA-EALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 159 ~----d~-~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
. |. ..+. ....+|+|+-... ....++.+.+.|+++|.++++..
T Consensus 223 ~~~~~~~~~~~~-~g~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 223 MKDAESLINKLT-DGLGASIAIDLVG------TEETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp HHHHHHHHHHHH-TTCCEEEEEESSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred cccchHHHHHhh-cCCCccEEEECCC------ChHHHHHHHHHhhcCCEEEEeCC
Confidence 1 11 1111 1236999985432 23467888999999999987543
No 348
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.94 E-value=0.66 Score=40.33 Aligned_cols=96 Identities=16% Similarity=0.088 Sum_probs=61.7
Q ss_pred hhcCCCCCCeEEEecC--CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAG--GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+.....++.+||-.|| |.|..+..++... +++++++|.+++.++.+++ + +. .
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~------------------G~~V~~~~~~~~~~~~~~~-~---g~---~- 192 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK------------------GCKVVGAAGSDEKIAYLKQ-I---GF---D- 192 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHH-T---TC---S-
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHh-c---CC---c-
Confidence 4456677889999998 3466666666654 4799999999887776633 2 21 1
Q ss_pred EEEEccccc---C-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 155 LWVEGDAEA---L-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 155 ~~~~~d~~~---~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
... |..+ . ....+.+|+++.+.. ...+....+.|+++|+++++.
T Consensus 193 ~~~--d~~~~~~~~~~~~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 193 AAF--NYKTVNSLEEALKKASPDGYDCYFDNVG-------GEFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp EEE--ETTSCSCHHHHHHHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECC
T ss_pred EEE--ecCCHHHHHHHHHHHhCCCCeEEEECCC-------hHHHHHHHHHHhcCCEEEEEe
Confidence 111 2211 1 011246999986543 134788889999999998754
No 349
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=92.89 E-value=0.57 Score=41.08 Aligned_cols=99 Identities=18% Similarity=0.169 Sum_probs=63.3
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
..... ++.+||-+|+|. |..+..+++.. +. +++++|.+++.++.+++. +. .
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~------------------Ga~~Vi~~~~~~~~~~~~~~~----Ga----~ 214 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKAS------------------GAYPVIVSEPSDFRRELAKKV----GA----D 214 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHT------------------TCCSEEEECSCHHHHHHHHHH----TC----S
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHc------------------CCCEEEEECCCHHHHHHHHHh----CC----C
Confidence 34455 788999999964 66777777765 36 899999998887777643 21 1
Q ss_pred EEEEcccccC-----CC-CCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEGDAEAL-----CF-EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d~~~~-----~~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
..+..+-.++ .. ....+|+|+-... ....++.+.+.|+++|+++.+..
T Consensus 215 ~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 215 YVINPFEEDVVKEVMDITDGNGVDVFLEFSG------APKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEECTTTSCHHHHHHHHTTTSCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred EEECCCCcCHHHHHHHHcCCCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEEcc
Confidence 1222111111 01 1235999985432 23567888999999999987543
No 350
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.69 E-value=0.43 Score=42.57 Aligned_cols=101 Identities=22% Similarity=0.269 Sum_probs=64.3
Q ss_pred hhcC-CCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLN-PFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~-~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
.... ..++.+||-+|+|. |..+..+++..+ ..++++++.+++.++.+++. +. -
T Consensus 188 ~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-----------------a~~Vi~~~~~~~~~~~~~~l----Ga----~ 242 (380)
T 1vj0_A 188 DEYPESFAGKTVVIQGAGPLGLFGVVIARSLG-----------------AENVIVIAGSPNRLKLAEEI----GA----D 242 (380)
T ss_dssp HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTT-----------------BSEEEEEESCHHHHHHHHHT----TC----S
T ss_pred HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcC-----------------CceEEEEcCCHHHHHHHHHc----CC----c
Confidence 3445 67788999999764 777777777652 14999999999888877642 21 1
Q ss_pred EEEEcc---ccc----C-CC-CCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEGD---AEA----L-CF-EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d---~~~----~-~~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.++..+ -.+ + .. ....+|+|+-... ....+....+.|+++|.++++..
T Consensus 243 ~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 243 LTLNRRETSVEERRKAIMDITHGRGADFILEATG------DSRALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp EEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSS------CTTHHHHHHHHEEEEEEEEECCC
T ss_pred EEEeccccCcchHHHHHHHHhCCCCCcEEEECCC------CHHHHHHHHHHHhcCCEEEEEec
Confidence 222221 111 1 01 1236999984332 12357778899999999987544
No 351
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.68 E-value=0.62 Score=40.81 Aligned_cols=97 Identities=19% Similarity=0.174 Sum_probs=64.3
Q ss_pred hhcCCCCCCeEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-.|+ | .|..+..+++.. ++++++++.+++.++.+++. +. -
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~------------------Ga~Vi~~~~~~~~~~~~~~~----ga----~ 206 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM------------------GAKVIAVVNRTAATEFVKSV----GA----D 206 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT------------------TCEEEEEESSGGGHHHHHHH----TC----S
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc------------------CCEEEEEeCCHHHHHHHHhc----CC----c
Confidence 4556678889999997 3 477777777775 47999999999888877653 21 1
Q ss_pred EEEEcccccC-----C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 155 LWVEGDAEAL-----C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 155 ~~~~~d~~~~-----~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
..+..+ .++ . .....+|+++-+..- ..+..+.+.|+++|.++++.
T Consensus 207 ~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 207 IVLPLE-EGWAKAVREATGGAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEEESS-TTHHHHHHHHTTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred EEecCc-hhHHHHHHHHhCCCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 222222 211 0 122369999854432 24677889999999998754
No 352
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.49 E-value=0.6 Score=40.85 Aligned_cols=98 Identities=17% Similarity=0.246 Sum_probs=65.1
Q ss_pred CCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEE
Q 036563 80 NPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVE 158 (288)
Q Consensus 80 ~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~ 158 (288)
...++.+||-+|+|. |..+..+++..+ ..+++++|.+++.++.+++. +.. ..+.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-----------------~~~Vi~~~~~~~~~~~~~~l----Ga~----~~i~ 222 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-----------------AARVIAVDLDDDRLALAREV----GAD----AAVK 222 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-----------------CCEEEEEESCHHHHHHHHHT----TCS----EEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-----------------CCEEEEEcCCHHHHHHHHHc----CCC----EEEc
Confidence 456788999999976 778888887762 47999999999988877653 221 2222
Q ss_pred ccc--cc-C-CC-CCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 159 GDA--EA-L-CF-EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 159 ~d~--~~-~-~~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+- .+ + .. ....+|+|+-.- .....++.+.+.|+++|+++++..
T Consensus 223 ~~~~~~~~v~~~t~g~g~d~v~d~~------G~~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 223 SGAGAADAIRELTGGQGATAVFDFV------GAQSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp CSTTHHHHHHHHHGGGCEEEEEESS------CCHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCcHHHHHHHHhCCCCCeEEEECC------CCHHHHHHHHHHHhcCCEEEEECC
Confidence 211 00 0 01 123699987432 224578889999999999987543
No 353
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.34 E-value=0.57 Score=41.06 Aligned_cols=100 Identities=20% Similarity=0.273 Sum_probs=62.8
Q ss_pred hcCCCCCCeEEEecCCc--cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 78 KLNPFPGMKHLDVAGGT--GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~G~--G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
.....++.+||-.|+|. |..+..++... .+.+++++|.+++.++.+++. +. . .
T Consensus 165 ~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~-----------------~Ga~Vi~~~~~~~~~~~~~~~----g~---~-~ 219 (347)
T 1jvb_A 165 KASLDPTKTLLVVGAGGGLGTMAVQIAKAV-----------------SGATIIGVDVREEAVEAAKRA----GA---D-Y 219 (347)
T ss_dssp HTTCCTTCEEEEETTTSHHHHHHHHHHHHH-----------------TCCEEEEEESSHHHHHHHHHH----TC---S-E
T ss_pred hcCCCCCCEEEEECCCccHHHHHHHHHHHc-----------------CCCeEEEEcCCHHHHHHHHHh----CC---C-E
Confidence 35567788999999973 55566666654 137899999999888777542 21 1 1
Q ss_pred EEEcccccC-----CCCC-CCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 156 WVEGDAEAL-----CFED-STMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 156 ~~~~d~~~~-----~~~~-~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+...-.+. .... +.+|+++-+.. ....++...+.|+++|.++++..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 220 VINASMQDPLAEIRRITESKGVDAVIDLNN------SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp EEETTTSCHHHHHHHHTTTSCEEEEEESCC------CHHHHTTGGGGEEEEEEEEECCS
T ss_pred EecCCCccHHHHHHHHhcCCCceEEEECCC------CHHHHHHHHHHHhcCCEEEEECC
Confidence 121111111 1111 47999885432 23467788999999999987543
No 354
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.29 E-value=2.7 Score=31.38 Aligned_cols=92 Identities=11% Similarity=0.034 Sum_probs=56.0
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
..+|+=+|||. ++..+++.+.. .+.+++++|.+++.++.+++ ..+.++.+|..+
T Consensus 7 ~~~viIiG~G~--~G~~la~~L~~---------------~g~~v~vid~~~~~~~~~~~---------~g~~~i~gd~~~ 60 (140)
T 3fwz_A 7 CNHALLVGYGR--VGSLLGEKLLA---------------SDIPLVVIETSRTRVDELRE---------RGVRAVLGNAAN 60 (140)
T ss_dssp CSCEEEECCSH--HHHHHHHHHHH---------------TTCCEEEEESCHHHHHHHHH---------TTCEEEESCTTS
T ss_pred CCCEEEECcCH--HHHHHHHHHHH---------------CCCCEEEEECCHHHHHHHHH---------cCCCEEECCCCC
Confidence 35788888854 44444444321 24799999999988776654 246678888755
Q ss_pred CC----CCCCCeeEEEeccccccccCHH-HHHHHHHhhccCCcEEEE
Q 036563 164 LC----FEDSTMDGYTIAFGIRNVTHIE-KALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 164 ~~----~~~~~~D~v~~~~~l~~~~~~~-~~l~~~~~~L~pgG~l~i 205 (288)
.. ..-..+|++++...- +.. ..+....+.+.|+..++.
T Consensus 61 ~~~l~~a~i~~ad~vi~~~~~----~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 61 EEIMQLAHLECAKWLILTIPN----GYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp HHHHHHTTGGGCSEEEECCSC----HHHHHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHhcCcccCCEEEEECCC----hHHHHHHHHHHHHHCCCCeEEE
Confidence 31 122468888764331 111 223445666778887765
No 355
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=92.20 E-value=0.98 Score=39.54 Aligned_cols=92 Identities=15% Similarity=0.174 Sum_probs=59.8
Q ss_pred CCCeEEEe-cCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 83 PGMKHLDV-AGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 83 ~~~~vLDi-G~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
++.+||=+ |+|. |..+..+++.. ++++++++.+++.++.+++. +. -..+..+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~------------------Ga~Vi~~~~~~~~~~~~~~l----Ga----~~vi~~~ 203 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY------------------GLRVITTASRNETIEWTKKM----GA----DIVLNHK 203 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT------------------TCEEEEECCSHHHHHHHHHH----TC----SEEECTT
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc------------------CCEEEEEeCCHHHHHHHHhc----CC----cEEEECC
Confidence 68899988 4553 77777777765 47999999999888877663 21 1112111
Q ss_pred --cc-cC-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 161 --AE-AL-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 161 --~~-~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
.. .+ ......+|+|+-.. .....+..+.+.|+++|.++.+
T Consensus 204 ~~~~~~~~~~~~~g~Dvv~d~~------g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 204 ESLLNQFKTQGIELVDYVFCTF------NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp SCHHHHHHHHTCCCEEEEEESS------CHHHHHHHHHHHEEEEEEEEES
T ss_pred ccHHHHHHHhCCCCccEEEECC------CchHHHHHHHHHhccCCEEEEE
Confidence 10 00 11234699988432 2355678889999999999753
No 356
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.00 E-value=0.75 Score=40.19 Aligned_cols=94 Identities=21% Similarity=0.238 Sum_probs=62.3
Q ss_pred CCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEE
Q 036563 80 NPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVE 158 (288)
Q Consensus 80 ~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~ 158 (288)
...++.+||-+|+|. |..+..+++.. +.+++++|.+++.++.+++. +.. ..+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~------------------Ga~Vi~~~~~~~~~~~~~~l----Ga~----~~~- 213 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM------------------GLNVVAVDIGDEKLELAKEL----GAD----LVV- 213 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT------------------TCEEEEECSCHHHHHHHHHT----TCS----EEE-
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc------------------CCEEEEEeCCHHHHHHHHHC----CCC----EEe-
Confidence 566788999999964 77777777765 37999999999888877542 211 112
Q ss_pred cccccCC-------CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 159 GDAEALC-------FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 159 ~d~~~~~-------~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
|..+.. .. +.+|+++-... ....++...+.|+++|+++++..
T Consensus 214 -d~~~~~~~~~~~~~~-~~~d~vid~~g------~~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 214 -NPLKEDAAKFMKEKV-GGVHAAVVTAV------SKPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp -CTTTSCHHHHHHHHH-SSEEEEEESSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred -cCCCccHHHHHHHHh-CCCCEEEECCC------CHHHHHHHHHHhhcCCEEEEecc
Confidence 221110 01 36899875332 23467888999999999987543
No 357
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=91.98 E-value=0.19 Score=43.42 Aligned_cols=55 Identities=18% Similarity=0.336 Sum_probs=40.1
Q ss_pred CceEEEEcccccC--CCCCCCeeEEEecccccccc--------------------CHHHHHHHHHhhccCCcEEEEE
Q 036563 152 KSLLWVEGDAEAL--CFEDSTMDGYTIAFGIRNVT--------------------HIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 152 ~~v~~~~~d~~~~--~~~~~~~D~v~~~~~l~~~~--------------------~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
.+..++++|+.+. .+++++||+|+++....... ....+++++.++|+|||.+++.
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 3578899998763 24567899999988754221 1235678999999999999864
No 358
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.95 E-value=0.42 Score=42.16 Aligned_cols=90 Identities=16% Similarity=0.155 Sum_probs=57.0
Q ss_pred CeEEEecCCc-cHHH-HHHH-HhhhhhhhhhhhcccccccCCCce-EEEEeCChh---HHHHHHHHhhhcCCCCCceEEE
Q 036563 85 MKHLDVAGGT-GDVA-FRIL-DTVNSIKRRALQDVLEDDLQEETR-IYVCDINPN---MLNVGKKRALERGYPDKSLLWV 157 (288)
Q Consensus 85 ~~vLDiG~G~-G~~~-~~l~-~~~~~~~~~~~~~~~~~~~~~~~~-v~~~D~s~~---~~~~a~~~~~~~~~~~~~v~~~ 157 (288)
.+||-+|+|. |..+ ..++ +.. +.+ ++++|.+++ .++.+++. + ....
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~------------------Ga~~Vi~~~~~~~~~~~~~~~~~l----G-----a~~v 226 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK------------------GYENLYCLGRRDRPDPTIDIIEEL----D-----ATYV 226 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT------------------CCCEEEEEECCCSSCHHHHHHHHT----T-----CEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc------------------CCcEEEEEeCCcccHHHHHHHHHc----C-----Cccc
Confidence 8999999864 6666 7777 654 355 999999887 77776542 2 1111
Q ss_pred Ec---ccccC-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 158 EG---DAEAL-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 158 ~~---d~~~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.. |..++ .. .+.+|+|+-... ....++.+.+.|+++|.++++..
T Consensus 227 ~~~~~~~~~i~~~-~gg~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 227 DSRQTPVEDVPDV-YEQMDFIYEATG------FPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp ETTTSCGGGHHHH-SCCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCccCHHHHHHh-CCCCCEEEECCC------ChHHHHHHHHHHhcCCEEEEEeC
Confidence 11 11111 01 236999874322 23467888999999999987543
No 359
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.79 E-value=0.67 Score=40.88 Aligned_cols=98 Identities=18% Similarity=0.155 Sum_probs=62.5
Q ss_pred cCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEE
Q 036563 79 LNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWV 157 (288)
Q Consensus 79 l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~ 157 (288)
....++.+||-+|+|. |..+..+++..+ .+++++|.+++.++.+++. +. -.++
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G------------------a~Vi~~~~~~~~~~~~~~l----Ga----~~v~ 228 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG------------------AETYVISRSSRKREDAMKM----GA----DHYI 228 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT------------------CEEEEEESSSTTHHHHHHH----TC----SEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC------------------CEEEEEcCCHHHHHHHHHc----CC----CEEE
Confidence 4567788999999864 777777777763 7899999999888877652 21 1222
Q ss_pred Ecccc-cC--CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 158 EGDAE-AL--CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 158 ~~d~~-~~--~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
...-. +. ... +.+|+|+-...-.. ...++.+.+.|+++|+++++.
T Consensus 229 ~~~~~~~~~~~~~-~~~D~vid~~g~~~----~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 229 ATLEEGDWGEKYF-DTFDLIVVCASSLT----DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EGGGTSCHHHHSC-SCEEEEEECCSCST----TCCTTTGGGGEEEEEEEEECC
T ss_pred cCcCchHHHHHhh-cCCCEEEECCCCCc----HHHHHHHHHHhcCCCEEEEec
Confidence 22111 11 111 46999985443200 123455788999999998643
No 360
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.67 E-value=1.4 Score=38.91 Aligned_cols=99 Identities=17% Similarity=0.095 Sum_probs=64.3
Q ss_pred hhcCCCCCCeEEEec-C-CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVA-G-GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG-~-G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-.| + |.|..+..+++.. ++++++++.+++.++.+++. +. -
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~------------------Ga~Vi~~~~~~~~~~~~~~~----Ga----~ 210 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA------------------KCHVIGTCSSDEKSAFLKSL----GC----D 210 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHHT----TC----S
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhC------------------CCEEEEEECCHHHHHHHHHc----CC----c
Confidence 344567788999999 3 4588888888775 37899999998877776642 21 1
Q ss_pred EEEEcccccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEGDAEAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d~~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
..+..+-.++ ......+|+++-+.. . ..++.+.+.|+++|.++++..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 211 RPINYKTEPVGTVLKQEYPEGVDVVYESVG-----G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEETTTSCHHHHHHHHCTTCEEEEEECSC-----T--HHHHHHHHHEEEEEEEEECCC
T ss_pred EEEecCChhHHHHHHHhcCCCCCEEEECCC-----H--HHHHHHHHHHhcCCEEEEEeC
Confidence 1222211111 011246999985433 1 467888999999999987543
No 361
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.44 E-value=1.4 Score=38.48 Aligned_cols=99 Identities=14% Similarity=0.096 Sum_probs=63.4
Q ss_pred hhcCCCCCCeEEEecC--CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAG--GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+.....++.+||-.|+ |.|..+..++... ++++++++.+++.++.+++.+ +. .
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~------------------G~~V~~~~~~~~~~~~~~~~~---g~---~- 203 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM------------------GCYVVGSAGSKEKVDLLKTKF---GF---D- 203 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHHTS---CC---S-
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHHHc---CC---c-
Confidence 4456678889999997 3467777777664 479999999988777665322 21 1
Q ss_pred EEEEc-ccccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 155 LWVEG-DAEAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 155 ~~~~~-d~~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
..+.. +..++ ......+|+++-+.. . ..+....+.|+++|+++++.
T Consensus 204 ~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g------~-~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 204 DAFNYKEESDLTAALKRCFPNGIDIYFENVG------G-KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEETTSCSCSHHHHHHHCTTCEEEEEESSC------H-HHHHHHHTTEEEEEEEEECC
T ss_pred eEEecCCHHHHHHHHHHHhCCCCcEEEECCC------H-HHHHHHHHHHhcCCEEEEEc
Confidence 11211 11111 011246999985433 1 36888899999999998754
No 362
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=91.43 E-value=0.71 Score=40.44 Aligned_cols=99 Identities=14% Similarity=0.137 Sum_probs=62.5
Q ss_pred hcCCCCCCeEEEecC--CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 78 KLNPFPGMKHLDVAG--GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
.....++.+||-+|+ |.|..+..++... +.+++++|.+++.++.+++. +. . .
T Consensus 164 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~------------------Ga~V~~~~~~~~~~~~~~~~----g~---~-~ 217 (347)
T 2hcy_A 164 SANLMAGHWVAISGAAGGLGSLAVQYAKAM------------------GYRVLGIDGGEGKEELFRSI----GG---E-V 217 (347)
T ss_dssp TTTCCTTCEEEEETTTSHHHHHHHHHHHHT------------------TCEEEEEECSTTHHHHHHHT----TC---C-E
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHC------------------CCcEEEEcCCHHHHHHHHHc----CC---c-e
Confidence 335677889999998 3466666666664 47999999988877666542 21 1 1
Q ss_pred EEEcc-cccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 156 WVEGD-AEAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 156 ~~~~d-~~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+... ..++ ....+.+|+++.+.. ....++.+.+.|+++|+++++..
T Consensus 218 ~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 218 FIDFTKEKDIVGAVLKATDGGAHGVINVSV------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEETTTCSCHHHHHHHHHTSCEEEEEECSS------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred EEecCccHhHHHHHHHHhCCCCCEEEECCC------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 22111 1111 011126999885443 23568888999999999987543
No 363
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=91.43 E-value=1.5 Score=37.86 Aligned_cols=96 Identities=17% Similarity=0.121 Sum_probs=59.3
Q ss_pred hhcCCCCCCeEEEec-CCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVA-GGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG-~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||=+| +|. |..+..+++..+ +++++++ ++..++.+++ .+..
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~G------------------a~vi~~~-~~~~~~~~~~----lGa~---- 198 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG------------------TTVITTA-SKRNHAFLKA----LGAE---- 198 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTT------------------CEEEEEE-CHHHHHHHHH----HTCS----
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC------------------CEEEEEe-ccchHHHHHH----cCCC----
Confidence 556677889999986 554 888888888763 7888887 4544555543 2321
Q ss_pred EEEEccccc-CCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 155 LWVEGDAEA-LCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 155 ~~~~~d~~~-~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
..+..+-.+ +...-..+|+|+-.-. ... +....+.|+++|+++.+
T Consensus 199 ~~i~~~~~~~~~~~~~g~D~v~d~~g------~~~-~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 199 QCINYHEEDFLLAISTPVDAVIDLVG------GDV-GIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEEETTTSCHHHHCCSCEEEEEESSC------HHH-HHHHGGGEEEEEEEEEC
T ss_pred EEEeCCCcchhhhhccCCCEEEECCC------cHH-HHHHHHhccCCCEEEEe
Confidence 223222111 1111146999874322 233 37889999999999864
No 364
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.35 E-value=1.9 Score=37.54 Aligned_cols=96 Identities=19% Similarity=0.127 Sum_probs=62.7
Q ss_pred cCCCCCCeEEEecC--CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEE
Q 036563 79 LNPFPGMKHLDVAG--GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLW 156 (288)
Q Consensus 79 l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~ 156 (288)
....++.+||-.|+ |.|..+..++... +.+++++|.+++.++.+++. +. . ..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~------------------G~~Vi~~~~~~~~~~~~~~~----ga---~-~~ 215 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF------------------GARVIATAGSEDKLRRAKAL----GA---D-ET 215 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHHH----TC---S-EE
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHhc----CC---C-EE
Confidence 35667889999998 4577777777775 37999999999888777542 21 1 12
Q ss_pred EEcccccC-----C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 157 VEGDAEAL-----C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 157 ~~~d~~~~-----~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+...-.++ . .....+|+++-+.. . ..++.+.+.|+++|+++++.
T Consensus 216 ~d~~~~~~~~~~~~~~~~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 216 VNYTHPDWPKEVRRLTGGKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EETTSTTHHHHHHHHTTTTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESS
T ss_pred EcCCcccHHHHHHHHhCCCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEe
Confidence 22111111 0 11236999986544 1 24677888999999998754
No 365
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=91.31 E-value=1.1 Score=38.67 Aligned_cols=98 Identities=14% Similarity=0.089 Sum_probs=62.0
Q ss_pred hcCCCCCCeEEEecC--CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 78 KLNPFPGMKHLDVAG--GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
.....++.+||-.|+ |.|..+..++... +++++++|.+++.++.+++. +. . .
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~------------------G~~V~~~~~~~~~~~~~~~~----g~---~-~ 188 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKAL------------------GAKLIGTVGTAQKAQSALKA----GA---W-Q 188 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHH------------------TCEEEEEESSHHHHHHHHHH----TC---S-E
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHc------------------CCEEEEEeCCHHHHHHHHHc----CC---C-E
Confidence 445677889999994 3466666666665 37999999998887777552 21 1 1
Q ss_pred EEEcccccC-----C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 156 WVEGDAEAL-----C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 156 ~~~~d~~~~-----~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+..+-.+. . .....+|+++.+.. ...++.+.+.|+++|+++++..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 189 VINYREEDLVERLKEITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEETTTSCHHHHHHHHTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred EEECCCccHHHHHHHHhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 222111111 0 11236999986543 2347778899999999987543
No 366
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.23 E-value=1.3 Score=38.89 Aligned_cols=98 Identities=14% Similarity=0.109 Sum_probs=61.8
Q ss_pred hhcCCCCCCeEEEecC--CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAG--GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-.|+ |.|..+..++... ++++++++.+++.++.+++. +. .
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~------------------Ga~Vi~~~~~~~~~~~~~~~----ga---~- 217 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAY------------------GLKILGTAGTEEGQKIVLQN----GA---H- 217 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHHT----TC---S-
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHC------------------CCEEEEEeCChhHHHHHHHc----CC---C-
Confidence 3455677889999997 3466666666664 47999999998877765432 21 1
Q ss_pred EEEEcccccC------CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 155 LWVEGDAEAL------CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 155 ~~~~~d~~~~------~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
..+..+-.+. ......+|+++-+.. ...+....+.|+++|+++++.
T Consensus 218 ~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G-------~~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 218 EVFNHREVNYIDKIKKYVGEKGIDIIIEMLA-------NVNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EEEETTSTTHHHHHHHHHCTTCEEEEEESCH-------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEEeCCCchHHHHHHHHcCCCCcEEEEECCC-------hHHHHHHHHhccCCCEEEEEe
Confidence 1222111111 011236999985443 135677889999999998754
No 367
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=91.22 E-value=1.9 Score=37.53 Aligned_cols=104 Identities=17% Similarity=0.197 Sum_probs=62.5
Q ss_pred hhcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 77 SKLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
......++.+||=+|+|+ |..+..+++.. ...+|+++|.+++.++.+++.-.. .-+.
T Consensus 157 ~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~-----------------~g~~Vi~~~~~~~r~~~~~~~Ga~-----~~i~ 214 (348)
T 4eez_A 157 KVSGVKPGDWQVIFGAGGLGNLAIQYAKNV-----------------FGAKVIAVDINQDKLNLAKKIGAD-----VTIN 214 (348)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-----------------SCCEEEEEESCHHHHHHHHHTTCS-----EEEE
T ss_pred cccCCCCCCEEEEEcCCCccHHHHHHHHHh-----------------CCCEEEEEECcHHHhhhhhhcCCe-----EEEe
Confidence 344567788999999987 45555555554 258999999999887766653211 0111
Q ss_pred EEEccccc-C-C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 156 WVEGDAEA-L-C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 156 ~~~~d~~~-~-~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+...|..+ . . .....+|.++.... ....+....+.|+++|.+++...
T Consensus 215 ~~~~~~~~~v~~~t~g~g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 215 SGDVNPVDEIKKITGGLGVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp C-CCCHHHHHHHHTTSSCEEEEEECCS------CHHHHHHHHHTEEEEEEEEECCC
T ss_pred CCCCCHHHHhhhhcCCCCceEEEEecc------CcchhheeheeecCCceEEEEec
Confidence 12222111 1 0 12234676664322 24567888999999999987543
No 368
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=91.04 E-value=1 Score=39.54 Aligned_cols=99 Identities=12% Similarity=0.107 Sum_probs=63.6
Q ss_pred hhcCCCCCCeEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+.....++.+||-.|+ | .|..+..+++.. +++++++|.+++.++.+++. +. .
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~------------------Ga~Vi~~~~~~~~~~~~~~l----Ga----~ 214 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF------------------GAEVYATAGSTGKCEACERL----GA----K 214 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHHH----TC----S
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc------------------CCEEEEEeCCHHHHHHHHhc----CC----C
Confidence 4456678889999853 3 477777777765 47999999999888877653 21 1
Q ss_pred EEEEcccccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEGDAEAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d~~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
..+..+-.++ ......+|+++-+..- ..+....+.|+++|.++++..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 215 RGINYRSEDFAAVIKAETGQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEEETTTSCHHHHHHHHHSSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred EEEeCCchHHHHHHHHHhCCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 1222211111 0113469999864431 246778899999999987543
No 369
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=90.97 E-value=1.8 Score=37.32 Aligned_cols=90 Identities=16% Similarity=0.148 Sum_probs=59.5
Q ss_pred eEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEc-ccc
Q 036563 86 KHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEG-DAE 162 (288)
Q Consensus 86 ~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~-d~~ 162 (288)
+||=.|+ | .|..+..+++..+ +++++++.+++.++.+++. +.. ..+.. +..
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~G------------------a~Vi~~~~~~~~~~~~~~l----Ga~----~vi~~~~~~ 202 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLG------------------YQVAAVSGRESTHGYLKSL----GAN----RILSRDEFA 202 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTT------------------CCEEEEESCGGGHHHHHHH----TCS----EEEEGGGSS
T ss_pred eEEEECCCcHHHHHHHHHHHHcC------------------CEEEEEeCCHHHHHHHHhc----CCC----EEEecCCHH
Confidence 4998887 4 4888888888763 7999999999988888653 211 11211 111
Q ss_pred cC-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 163 AL-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 163 ~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.. ....+.+|+++-.. . ...+..+.+.|+++|+++++..
T Consensus 203 ~~~~~~~~~~d~v~d~~-----g--~~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 203 ESRPLEKQLWAGAIDTV-----G--DKVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp CCCSSCCCCEEEEEESS-----C--HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHhhcCCCccEEEECC-----C--cHHHHHHHHHHhcCCEEEEEec
Confidence 11 12235699876432 1 1278889999999999987543
No 370
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=90.73 E-value=0.46 Score=41.82 Aligned_cols=76 Identities=14% Similarity=0.106 Sum_probs=54.2
Q ss_pred CeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccC
Q 036563 85 MKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEAL 164 (288)
Q Consensus 85 ~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~ 164 (288)
.+++|+-||.|.+...+.+..- ....+.++|+++...+.-+.+.. ...+..+|+.++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~----------------~~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~~DI~~~ 60 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGL----------------DGEIVAAVDINTVANSVYKHNFP-------ETNLLNRNIQQL 60 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTC----------------SEEEEEEECCCHHHHHHHHHHCT-------TSCEECCCGGGC
T ss_pred CEEEEECcCccHHHHHHHHcCC----------------CceEEEEEeCCHHHHHHHHHhCC-------CCceeccccccC
Confidence 5899999999999988876520 11457899999998887777653 344667888776
Q ss_pred C---CCCCCeeEEEeccccccc
Q 036563 165 C---FEDSTMDGYTIAFGIRNV 183 (288)
Q Consensus 165 ~---~~~~~~D~v~~~~~l~~~ 183 (288)
. ++...+|+++.....+.+
T Consensus 61 ~~~~~~~~~~D~l~ggpPCQ~f 82 (333)
T 4h0n_A 61 TPQVIKKWNVDTILMSPPCQPF 82 (333)
T ss_dssp CHHHHHHTTCCEEEECCCCCCS
T ss_pred CHHHhccCCCCEEEecCCCcch
Confidence 3 222358999987765544
No 371
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=90.25 E-value=2.2 Score=38.96 Aligned_cols=96 Identities=15% Similarity=0.098 Sum_probs=62.6
Q ss_pred cCCCCCCeEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEE
Q 036563 79 LNPFPGMKHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLW 156 (288)
Q Consensus 79 l~~~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~ 156 (288)
....++.+||=+|+ | .|..+..+++.. ++++++++.+++.++.+++. +.. .+
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~------------------Ga~vi~~~~~~~~~~~~~~l----Ga~----~v 277 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG------------------GANPICVVSSPQKAEICRAM----GAE----AI 277 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHHH----TCC----EE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc------------------CCeEEEEECCHHHHHHHHhh----CCc----EE
Confidence 45678889999997 4 377888888775 47889999888888877553 211 12
Q ss_pred EEcccc---------------------cC-C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 157 VEGDAE---------------------AL-C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 157 ~~~d~~---------------------~~-~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+...-. .+ . .....+|+|+-... . ..+....+.|+++|.++++.
T Consensus 278 i~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G------~-~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 278 IDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPG------R-ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp EETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSC------H-HHHHHHHHHEEEEEEEEESC
T ss_pred EecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCC------c-hhHHHHHHHhhCCcEEEEEe
Confidence 211110 00 0 11246999874322 2 56788899999999998754
No 372
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.18 E-value=0.67 Score=40.86 Aligned_cols=99 Identities=16% Similarity=0.226 Sum_probs=60.4
Q ss_pred cCCC-CCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEE
Q 036563 79 LNPF-PGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLW 156 (288)
Q Consensus 79 l~~~-~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~ 156 (288)
.... ++.+||=+|+|. |..+..+++..+ ++++++|.+++.++.+++.+ +.. .+
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G------------------a~Vi~~~~~~~~~~~~~~~l---Ga~----~v 229 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMG------------------HHVTVISSSNKKREEALQDL---GAD----DY 229 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHT------------------CEEEEEESSTTHHHHHHTTS---CCS----CE
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCC------------------CeEEEEeCChHHHHHHHHHc---CCc----ee
Confidence 4455 788999999874 777777777753 78999999988776665322 211 11
Q ss_pred EEc-ccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 157 VEG-DAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 157 ~~~-d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+.. +........+.+|+|+-...-. ..+....+.|+++|+++.+..
T Consensus 230 i~~~~~~~~~~~~~g~D~vid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 230 VIGSDQAKMSELADSLDYVIDTVPVH------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp EETTCHHHHHHSTTTEEEEEECCCSC------CCSHHHHTTEEEEEEEEECSC
T ss_pred eccccHHHHHHhcCCCCEEEECCCCh------HHHHHHHHHhccCCEEEEeCC
Confidence 211 1111110123699998543211 124556789999999987543
No 373
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=89.94 E-value=1.1 Score=40.79 Aligned_cols=51 Identities=14% Similarity=0.239 Sum_probs=38.1
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE 146 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~ 146 (288)
..+|+|+|+|+|.++..+++...... +...+++.+|+|+...+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~------------~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALG------------VELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTT------------CCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcC------------CCCceEEEEEcCHHHHHHHHHHHhc
Confidence 36899999999999999988763100 0124899999999887766666643
No 374
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=89.89 E-value=1.2 Score=38.31 Aligned_cols=75 Identities=12% Similarity=0.100 Sum_probs=52.9
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCce-EEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETR-IYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
....+++|+-||.|.++..+.+..- ... +.++|+++...+.-+.+. +...+..+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~-----------------~~~~v~a~E~d~~a~~ty~~N~-------~~~~~~~~D 69 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGI-----------------QVDRYIASEVCEDSITVGMVRH-------QGKIMYVGD 69 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTB-----------------CEEEEEEECCCHHHHHHHHHHT-------TTCEEEECC
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCC-----------------ccceEEEEECCHHHHHHHHHhC-------CCCceeCCC
Confidence 3456899999999999988776531 122 689999999887666654 234577889
Q ss_pred cccCC---CC-CCCeeEEEecccc
Q 036563 161 AEALC---FE-DSTMDGYTIAFGI 180 (288)
Q Consensus 161 ~~~~~---~~-~~~~D~v~~~~~l 180 (288)
+.++. ++ ...+|+++.....
T Consensus 70 I~~i~~~~i~~~~~~Dll~ggpPC 93 (295)
T 2qrv_A 70 VRSVTQKHIQEWGPFDLVIGGSPC 93 (295)
T ss_dssp GGGCCHHHHHHTCCCSEEEECCCC
T ss_pred hHHccHHHhcccCCcCEEEecCCC
Confidence 88763 11 1368999986643
No 375
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=89.77 E-value=2.2 Score=37.35 Aligned_cols=99 Identities=18% Similarity=0.112 Sum_probs=61.7
Q ss_pred hhcCCCCCCeEEEecC--CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAG--GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-.|+ |.|..+..++... +++++++|.+++.++.+++. +. .
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~------------------Ga~Vi~~~~~~~~~~~~~~~----g~---~- 209 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMA------------------GAIPLVTAGSQKKLQMAEKL----GA---A- 209 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT------------------TCEEEEEESCHHHHHHHHHH----TC---S-
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHc------------------CCEEEEEeCCHHHHHHHHHc----CC---c-
Confidence 3455677889999984 3466666666664 47999999999888777432 21 1
Q ss_pred EEEEcccccC-----C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 155 LWVEGDAEAL-----C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 155 ~~~~~d~~~~-----~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
..+..+-.+. . .....+|+++-+..- ..+....+.|+++|.++++..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~-------~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 210 AGFNYKKEDFSEATLKFTKGAGVNLILDCIGG-------SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp EEEETTTSCHHHHHHHHTTTSCEEEEEESSCG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred EEEecCChHHHHHHHHHhcCCCceEEEECCCc-------hHHHHHHHhccCCCEEEEEec
Confidence 1122111111 0 122369999855432 146677899999999987543
No 376
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=89.69 E-value=1.1 Score=39.66 Aligned_cols=99 Identities=20% Similarity=0.256 Sum_probs=59.8
Q ss_pred cCCC-CCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEE
Q 036563 79 LNPF-PGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLW 156 (288)
Q Consensus 79 l~~~-~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~ 156 (288)
.... ++.+||=+|+|. |..+..+++.. +.++++++.+++.++.+++.+ +. ..+
T Consensus 182 ~~~~~~g~~VlV~GaG~vG~~~~q~a~~~------------------Ga~Vi~~~~~~~~~~~~~~~l---Ga----~~v 236 (366)
T 1yqd_A 182 FGLDEPGKHIGIVGLGGLGHVAVKFAKAF------------------GSKVTVISTSPSKKEEALKNF---GA----DSF 236 (366)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHHT------------------TCEEEEEESCGGGHHHHHHTS---CC----SEE
T ss_pred cCcCCCCCEEEEECCCHHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHHhc---CC----ceE
Confidence 4455 788999999864 66666666665 378999999988777665332 21 112
Q ss_pred EEc-ccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 157 VEG-DAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 157 ~~~-d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+.. +...+....+.+|+|+-..... ..++...+.|+++|.++.+..
T Consensus 237 ~~~~~~~~~~~~~~~~D~vid~~g~~------~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 237 LVSRDQEQMQAAAGTLDGIIDTVSAV------HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp EETTCHHHHHHTTTCEEEEEECCSSC------CCSHHHHHHEEEEEEEEECCC
T ss_pred EeccCHHHHHHhhCCCCEEEECCCcH------HHHHHHHHHHhcCCEEEEEcc
Confidence 211 1111110113699998544321 124456788999999987543
No 377
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.68 E-value=0.34 Score=42.37 Aligned_cols=55 Identities=15% Similarity=0.050 Sum_probs=41.1
Q ss_pred CceEEEEccccc-CC-CCCCCeeEEEecccccccc--------------CHHHHHHHHHhhccCCcEEEEE
Q 036563 152 KSLLWVEGDAEA-LC-FEDSTMDGYTIAFGIRNVT--------------HIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 152 ~~v~~~~~d~~~-~~-~~~~~~D~v~~~~~l~~~~--------------~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
....++++|... +. ++++++|+|++........ .....+.++.++|+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 457788898764 32 5577899999987653321 2467889999999999999874
No 378
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.63 E-value=2.2 Score=37.31 Aligned_cols=99 Identities=11% Similarity=0.020 Sum_probs=61.9
Q ss_pred hhcCCCCC--CeEEEecCC--ccHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCC
Q 036563 77 SKLNPFPG--MKHLDVAGG--TGDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPD 151 (288)
Q Consensus 77 ~~l~~~~~--~~vLDiG~G--~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~ 151 (288)
......++ .+||-.|++ .|..+..++... ++ +++++|.+++.++.+++.+ +.
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~------------------Ga~~Vi~~~~~~~~~~~~~~~~---g~-- 208 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL------------------GCSRVVGICGTHEKCILLTSEL---GF-- 208 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT------------------TCSEEEEEESCHHHHHHHHHTS---CC--
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC------------------CCCeEEEEeCCHHHHHHHHHHc---CC--
Confidence 45566778 899999983 356666666654 36 9999999887776665422 21
Q ss_pred CceEEEEcccccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 152 KSLLWVEGDAEAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 152 ~~v~~~~~d~~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
. ..+..+-.+. ....+.+|+++-+.. ...+..+.+.|+++|+++++.
T Consensus 209 -~-~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 209 -D-AAINYKKDNVAEQLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp -S-EEEETTTSCHHHHHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECC
T ss_pred -c-eEEecCchHHHHHHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEEC
Confidence 1 1222111111 011226999885443 256788899999999998754
No 379
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.59 E-value=2.1 Score=37.07 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=62.5
Q ss_pred hcCCCCCCeEEEecC--CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 78 KLNPFPGMKHLDVAG--GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~--G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
.....++.+||-.|+ |.|..+..++... +++++++|.+++.++.+++. +. . .
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~------------------G~~Vi~~~~~~~~~~~~~~~----g~---~-~ 193 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL------------------GATVIGTVSTEEKAETARKL----GC---H-H 193 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHHH----TC---S-E
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHHc----CC---C-E
Confidence 445677889999995 4577777777765 47999999998877776542 21 1 1
Q ss_pred EEEcccccC-----C-CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 156 WVEGDAEAL-----C-FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 156 ~~~~d~~~~-----~-~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+..+-.+. . .....+|+++-+..- ..++.+.+.|+++|.++++..
T Consensus 194 ~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 194 TINYSTQDFAEVVREITGGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp EEETTTSCHHHHHHHHHTTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECCC
T ss_pred EEECCCHHHHHHHHHHhCCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEec
Confidence 122111111 0 112369999854431 347778899999999987543
No 380
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.30 E-value=0.14 Score=44.99 Aligned_cols=97 Identities=23% Similarity=0.199 Sum_probs=61.0
Q ss_pred hcCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCc-eEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 78 KLNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEET-RIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 78 ~l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
.... ++.+||-+|+|. |..+..+++.. +. +++++|.+++.++.+++. . ..
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~------------------Ga~~Vi~~~~~~~~~~~~~~l-a------~~-- 211 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS------------------GAGPILVSDPNPYRLAFARPY-A------DR-- 211 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT------------------TCCSEEEECSCHHHHGGGTTT-C------SE--
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc------------------CCCEEEEECCCHHHHHHHHHh-H------Hh--
Confidence 4455 788999999864 67777777765 36 899999988776655432 1 11
Q ss_pred EEEcccccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 156 WVEGDAEAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 156 ~~~~d~~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+..+-.++ ......+|+|+-... ....++...+.|+++|+++++..
T Consensus 212 v~~~~~~~~~~~~~~~~~~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 212 LVNPLEEDLLEVVRRVTGSGVEVLLEFSG------NEAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EECTTTSCHHHHHHHHHSSCEEEEEECSC------CHHHHHHHHHHEEEEEEEEECCC
T ss_pred ccCcCccCHHHHHHHhcCCCCCEEEECCC------CHHHHHHHHHHHhcCCEEEEEec
Confidence 111110111 001236999974332 23467888999999999987543
No 381
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=88.94 E-value=1.4 Score=38.11 Aligned_cols=73 Identities=12% Similarity=0.117 Sum_probs=52.5
Q ss_pred CeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccC
Q 036563 85 MKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEAL 164 (288)
Q Consensus 85 ~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~ 164 (288)
++|||+-||.|.++.-+.+.. -..+.++|+++.+.+.-+.+.. -.++.+|+.++
T Consensus 1 mkvidLFsG~GG~~~G~~~aG------------------~~~v~a~e~d~~a~~ty~~N~~--------~~~~~~DI~~i 54 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAG------------------FRIICANEYDKSIWKTYESNHS--------AKLIKGDISKI 54 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTT------------------CEEEEEEECCTTTHHHHHHHCC--------SEEEESCGGGC
T ss_pred CeEEEeCcCccHHHHHHHHCC------------------CEEEEEEeCCHHHHHHHHHHCC--------CCcccCChhhC
Confidence 479999999999988776652 2457799999998887776642 35677898876
Q ss_pred CC-CCCCeeEEEeccccccc
Q 036563 165 CF-EDSTMDGYTIAFGIRNV 183 (288)
Q Consensus 165 ~~-~~~~~D~v~~~~~l~~~ 183 (288)
.. .-...|+++.....+.+
T Consensus 55 ~~~~~~~~D~l~ggpPCQ~f 74 (331)
T 3ubt_Y 55 SSDEFPKCDGIIGGPPSQSW 74 (331)
T ss_dssp CGGGSCCCSEEECCCCGGGT
T ss_pred CHhhCCcccEEEecCCCCCc
Confidence 32 11358999887764433
No 382
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=88.84 E-value=0.7 Score=38.90 Aligned_cols=53 Identities=8% Similarity=-0.001 Sum_probs=35.7
Q ss_pred eEEEEcccccC--CCCCCCeeEEEeccccccc-c-------------CHHHHHHHHHhhccCCcEEEEE
Q 036563 154 LLWVEGDAEAL--CFEDSTMDGYTIAFGIRNV-T-------------HIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 154 v~~~~~d~~~~--~~~~~~~D~v~~~~~l~~~-~-------------~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
..++++|+... .++++++|+|++......- . -....+.++.++|+|+|.+++.
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 35667776432 2445689999987764322 1 1355788899999999999863
No 383
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=88.63 E-value=2.6 Score=37.10 Aligned_cols=92 Identities=15% Similarity=0.104 Sum_probs=56.3
Q ss_pred CCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCCh---hHHHHHHHHhhhcCCCCCceEEEEc
Q 036563 84 GMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINP---NMLNVGKKRALERGYPDKSLLWVEG 159 (288)
Q Consensus 84 ~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~---~~~~~a~~~~~~~~~~~~~v~~~~~ 159 (288)
+.+||-+|+|. |..+..+++.. +++++++|.++ +.++.+++. + ......
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~------------------Ga~Vi~~~~~~~~~~~~~~~~~~----g-----a~~v~~ 233 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY------------------GLEVWMANRREPTEVEQTVIEET----K-----TNYYNS 233 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH------------------TCEEEEEESSCCCHHHHHHHHHH----T-----CEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------------------CCEEEEEeCCccchHHHHHHHHh----C-----Cceech
Confidence 78999999853 55666666655 37999999987 666666532 2 111211
Q ss_pred c-cc-cCCCCCCCeeEEEeccccccccCHHHHH-HHHHhhccCCcEEEEEec
Q 036563 160 D-AE-ALCFEDSTMDGYTIAFGIRNVTHIEKAL-AEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 160 d-~~-~~~~~~~~~D~v~~~~~l~~~~~~~~~l-~~~~~~L~pgG~l~i~~~ 208 (288)
+ +. .+......+|+++-+... ...+ +.+.+.|+++|.++++..
T Consensus 234 ~~~~~~~~~~~~~~d~vid~~g~------~~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 234 SNGYDKLKDSVGKFDVIIDATGA------DVNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp TTCSHHHHHHHCCEEEEEECCCC------CTHHHHHHGGGEEEEEEEEECSC
T ss_pred HHHHHHHHHhCCCCCEEEECCCC------hHHHHHHHHHHHhcCCEEEEEec
Confidence 1 10 000011469999854432 1245 788999999999987544
No 384
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.34 E-value=0.77 Score=39.31 Aligned_cols=93 Identities=20% Similarity=0.213 Sum_probs=59.5
Q ss_pred CCCCCeEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEE
Q 036563 81 PFPGMKHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVE 158 (288)
Q Consensus 81 ~~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~ 158 (288)
..++.+||-+|+ | .|..+..+++.. ++++++++.+++.++.+++. +.. ..+.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~------------------Ga~Vi~~~~~~~~~~~~~~~----ga~----~~~~ 176 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM------------------GLRVLAAASRPEKLALPLAL----GAE----EAAT 176 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT------------------TCEEEEEESSGGGSHHHHHT----TCS----EEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHhc----CCC----EEEE
Confidence 567889999998 3 477777777775 37999999988887777542 211 1222
Q ss_pred ccc-ccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 159 GDA-EALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 159 ~d~-~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.+- .++...-..+|+++- .. . ..++...+.|+++|+++++.
T Consensus 177 ~~~~~~~~~~~~~~d~vid-~g-----~--~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 177 YAEVPERAKAWGGLDLVLE-VR-----G--KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp GGGHHHHHHHTTSEEEEEE-CS-----C--TTHHHHHTTEEEEEEEEEC-
T ss_pred CCcchhHHHHhcCceEEEE-CC-----H--HHHHHHHHhhccCCEEEEEe
Confidence 111 111000046999985 32 1 24677889999999988643
No 385
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=87.95 E-value=6.5 Score=28.98 Aligned_cols=92 Identities=7% Similarity=0.095 Sum_probs=54.1
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
..+|+=+|+| .++..+++.+.. .+.+++++|.+++.++.++. ....++.+|..+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~---------------~g~~V~~id~~~~~~~~~~~---------~~~~~~~gd~~~ 59 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTA---------------AGKKVLAVDKSKEKIELLED---------EGFDAVIADPTD 59 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHH---------------TTCCEEEEESCHHHHHHHHH---------TTCEEEECCTTC
T ss_pred CCEEEEECCC--HHHHHHHHHHHH---------------CCCeEEEEECCHHHHHHHHH---------CCCcEEECCCCC
Confidence 3578889885 466666665431 24789999999987766553 235677788765
Q ss_pred CC----CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 164 LC----FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 164 ~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
.. ..-..+|.+++... . ......+....+.+. ...++.
T Consensus 60 ~~~l~~~~~~~~d~vi~~~~--~-~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 60 ESFYRSLDLEGVSAVLITGS--D-DEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp HHHHHHSCCTTCSEEEECCS--C-HHHHHHHHHHHHHHC-CCCEEE
T ss_pred HHHHHhCCcccCCEEEEecC--C-HHHHHHHHHHHHHhC-CceEEE
Confidence 31 12346898876443 1 111222333444455 555554
No 386
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=87.10 E-value=3.4 Score=35.97 Aligned_cols=94 Identities=18% Similarity=0.205 Sum_probs=61.5
Q ss_pred hhcCCCCCCeEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 77 SKLNPFPGMKHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
......++.+||-+|+ | .|..+..+++.. +++++++ .+++.++.+++. +.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~------------------Ga~Vi~~-~~~~~~~~~~~l----Ga----- 195 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALAR------------------GARVFAT-ARGSDLEYVRDL----GA----- 195 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHT------------------TCEEEEE-ECHHHHHHHHHH----TS-----
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHC------------------CCEEEEE-eCHHHHHHHHHc----CC-----
Confidence 5556678899999994 4 477877787775 4789999 788777766543 21
Q ss_pred EEEEcccccCC------CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 155 LWVEGDAEALC------FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 155 ~~~~~d~~~~~------~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
..+. +-.++. .....+|+|+-+.. . ..+....+.|+++|.++++
T Consensus 196 ~~i~-~~~~~~~~~~~~~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 196 TPID-ASREPEDYAAEHTAGQGFDLVYDTLG-----G--PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EEEE-TTSCHHHHHHHHHTTSCEEEEEESSC-----T--HHHHHHHHHEEEEEEEEES
T ss_pred CEec-cCCCHHHHHHHHhcCCCceEEEECCC-----c--HHHHHHHHHHhcCCeEEEE
Confidence 1122 211110 12246999875332 1 4677888999999999864
No 387
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=86.99 E-value=1.2 Score=41.28 Aligned_cols=78 Identities=10% Similarity=0.132 Sum_probs=53.8
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
..+++|+-||.|.++.-+.+.. ...+.++|+++...+.-+.+.... +...++.+|+.+
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG------------------~~~v~avE~d~~A~~ty~~N~~~~----p~~~~~~~DI~~ 145 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIG------------------GQCVFTSEWNKHAVRTYKANHYCD----PATHHFNEDIRD 145 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTT------------------EEEEEEECCCHHHHHHHHHHSCCC----TTTCEEESCTHH
T ss_pred cceEEEecCCccHHHHHHHHCC------------------CEEEEEEeCCHHHHHHHHHhcccC----CCcceeccchhh
Confidence 3589999999999998886652 145789999998887776665221 344567788765
Q ss_pred CCC-----------------CCCCeeEEEeccccccc
Q 036563 164 LCF-----------------EDSTMDGYTIAFGIRNV 183 (288)
Q Consensus 164 ~~~-----------------~~~~~D~v~~~~~l~~~ 183 (288)
+.. ....+|+++.....+.+
T Consensus 146 i~~~~~~~~~~~~~~~~i~~~~~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 146 ITLSHQEGVSDEAAAEHIRQHIPEHDVLLAGFPCQPF 182 (482)
T ss_dssp HHCTTCTTSCHHHHHHHHHHHSCCCSEEEEECCCCCC
T ss_pred hhhccccccchhhHHhhhhhcCCCCCEEEecCCCcch
Confidence 431 11358999987765544
No 388
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=86.07 E-value=8.3 Score=31.77 Aligned_cols=108 Identities=16% Similarity=0.114 Sum_probs=66.6
Q ss_pred CCCCeEEEecCC-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 82 FPGMKHLDVAGG-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 82 ~~~~~vLDiG~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
.++++||=.|++ +|.++..+++.+.. .+.+++.++.+....+..++..... +++.++.+|
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~D 72 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKR---------------EGAELAFTYVGDRFKDRITEFAAEF----GSELVFPCD 72 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHH---------------TTCEEEEEESSGGGHHHHHHHHHHT----TCCCEEECC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHH---------------cCCCEEEEecchhhHHHHHHHHHHc----CCcEEEECC
Confidence 456788888874 35566666665531 3578999998866555555444443 357888899
Q ss_pred cccCC----------CCCCCeeEEEeccccccc----------cC---H-----------HHHHHHHHhhccCCcEEEEE
Q 036563 161 AEALC----------FEDSTMDGYTIAFGIRNV----------TH---I-----------EKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 161 ~~~~~----------~~~~~~D~v~~~~~l~~~----------~~---~-----------~~~l~~~~~~L~pgG~l~i~ 206 (288)
+.+.. ..-+..|+++.+..+... .+ . ..+++.+.+.++++|.++.+
T Consensus 73 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i 152 (271)
T 3ek2_A 73 VADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTL 152 (271)
T ss_dssp TTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEE
Confidence 87642 011368999877654321 11 1 22456667777778888765
Q ss_pred ec
Q 036563 207 EL 208 (288)
Q Consensus 207 ~~ 208 (288)
..
T Consensus 153 sS 154 (271)
T 3ek2_A 153 SY 154 (271)
T ss_dssp EC
T ss_pred ec
Confidence 43
No 389
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=86.06 E-value=13 Score=30.68 Aligned_cols=94 Identities=11% Similarity=-0.089 Sum_probs=60.1
Q ss_pred CeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccC
Q 036563 85 MKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEAL 164 (288)
Q Consensus 85 ~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~ 164 (288)
++||=.|+ |.++..+++.+.. .+.+|++++.++........ .+++++.+|+.++
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~---------------~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~D~~d~ 59 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAP---------------QGWRIIGTSRNPDQMEAIRA---------SGAEPLLWPGEEP 59 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGG---------------GTCEEEEEESCGGGHHHHHH---------TTEEEEESSSSCC
T ss_pred CcEEEECC--cHHHHHHHHHHHH---------------CCCEEEEEEcChhhhhhHhh---------CCCeEEEeccccc
Confidence 58999994 9999999888631 34789999988865543322 3688999998876
Q ss_pred CCCCCCeeEEEeccccccccCH--HHHHHHHHhhccCCcEEEEE
Q 036563 165 CFEDSTMDGYTIAFGIRNVTHI--EKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 165 ~~~~~~~D~v~~~~~l~~~~~~--~~~l~~~~~~L~pgG~l~i~ 206 (288)
. -..+|.|+.........+. ..+++.+.+.-..-+.++.+
T Consensus 60 ~--~~~~d~vi~~a~~~~~~~~~~~~l~~a~~~~~~~~~~~v~~ 101 (286)
T 3ius_A 60 S--LDGVTHLLISTAPDSGGDPVLAALGDQIAARAAQFRWVGYL 101 (286)
T ss_dssp C--CTTCCEEEECCCCBTTBCHHHHHHHHHHHHTGGGCSEEEEE
T ss_pred c--cCCCCEEEECCCccccccHHHHHHHHHHHhhcCCceEEEEe
Confidence 6 4568998876654433322 23344333321222455543
No 390
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.01 E-value=4.4 Score=34.91 Aligned_cols=97 Identities=20% Similarity=0.216 Sum_probs=61.4
Q ss_pred cCCCCCC-eEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 79 LNPFPGM-KHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 79 l~~~~~~-~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
....++. +||-.|+ | .|..+..+++..+ +++++++.+++.++.+++. +.. .
T Consensus 145 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~G------------------a~vi~~~~~~~~~~~~~~l----Ga~----~ 198 (330)
T 1tt7_A 145 NGLSPEKGSVLVTGATGGVGGIAVSMLNKRG------------------YDVVASTGNREAADYLKQL----GAS----E 198 (330)
T ss_dssp TTCCGGGCCEEEESTTSHHHHHHHHHHHHHT------------------CCEEEEESSSSTHHHHHHH----TCS----E
T ss_pred cCcCCCCceEEEECCCCHHHHHHHHHHHHCC------------------CEEEEEeCCHHHHHHHHHc----CCc----E
Confidence 3445564 8999997 4 4777777877763 7899999988877777642 211 1
Q ss_pred EEEc-cc--ccC-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 156 WVEG-DA--EAL-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 156 ~~~~-d~--~~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+.. +. ... ......+|+++-... . ..+....+.|+++|+++++..
T Consensus 199 v~~~~~~~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 199 VISREDVYDGTLKALSKQQWQGAVDPVG-----G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EEEHHHHCSSCCCSSCCCCEEEEEESCC-----T--HHHHHHHTTEEEEEEEEECCC
T ss_pred EEECCCchHHHHHHhhcCCccEEEECCc-----H--HHHHHHHHhhcCCCEEEEEec
Confidence 1211 11 111 122346898874332 2 357888999999999987543
No 391
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=85.98 E-value=0.78 Score=40.69 Aligned_cols=99 Identities=13% Similarity=0.047 Sum_probs=55.6
Q ss_pred CCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
+.+|+=+|+|. |..+...+... +.+|+++|.+++.++.+++.... .+.....+..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~------------------Ga~V~v~dr~~~r~~~~~~~~~~------~~~~~~~~~~ 222 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGL------------------GAQVQIFDINVERLSYLETLFGS------RVELLYSNSA 222 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT------------------TCEEEEEESCHHHHHHHHHHHGG------GSEEEECCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC------------------CCEEEEEeCCHHHHHHHHHhhCc------eeEeeeCCHH
Confidence 47899999964 55555555554 36999999999888777654322 2222222211
Q ss_pred cCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 163 ALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 163 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
++...-..+|+|+..........+.-+.+...+.+++||.++.+
T Consensus 223 ~~~~~~~~~DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivdv 266 (361)
T 1pjc_A 223 EIETAVAEADLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVDV 266 (361)
T ss_dssp HHHHHHHTCSEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEET
T ss_pred HHHHHHcCCCEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEEE
Confidence 11100125899986543322111111134456788999988753
No 392
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.64 E-value=5.7 Score=30.87 Aligned_cols=94 Identities=11% Similarity=0.090 Sum_probs=52.7
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCC-CceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQE-ETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
+.+|+=+|+| .++..+++.+.. . +.+|+++|.+++..+.+++ . .+..+.+|..
T Consensus 39 ~~~v~IiG~G--~~G~~~a~~L~~---------------~~g~~V~vid~~~~~~~~~~~----~-----g~~~~~gd~~ 92 (183)
T 3c85_A 39 HAQVLILGMG--RIGTGAYDELRA---------------RYGKISLGIEIREEAAQQHRS----E-----GRNVISGDAT 92 (183)
T ss_dssp TCSEEEECCS--HHHHHHHHHHHH---------------HHCSCEEEEESCHHHHHHHHH----T-----TCCEEECCTT
T ss_pred CCcEEEECCC--HHHHHHHHHHHh---------------ccCCeEEEEECCHHHHHHHHH----C-----CCCEEEcCCC
Confidence 5589888875 455555444321 2 3689999999987665543 1 3445666654
Q ss_pred cC----CC-CCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 163 AL----CF-EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 163 ~~----~~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
+. .. .-..+|+|++... . ......+-...+.+.|++.+++.
T Consensus 93 ~~~~l~~~~~~~~ad~vi~~~~--~-~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 93 DPDFWERILDTGHVKLVLLAMP--H-HQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CHHHHHTBCSCCCCCEEEECCS--S-HHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CHHHHHhccCCCCCCEEEEeCC--C-hHHHHHHHHHHHHHCCCCEEEEE
Confidence 32 11 2345898886432 1 11122233345556777777753
No 393
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=85.57 E-value=0.6 Score=41.80 Aligned_cols=42 Identities=14% Similarity=0.173 Sum_probs=33.3
Q ss_pred CCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHH
Q 036563 83 PGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKK 142 (288)
Q Consensus 83 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~ 142 (288)
++.+|+=+|+|. |..+...+..++ .+|+++|.++..++.+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lG------------------a~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLG------------------AKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHT------------------CEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCC------------------CEEEEEeCCHHHHHHHHH
Confidence 567999999986 666666666653 799999999988877765
No 394
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=85.03 E-value=0.64 Score=41.52 Aligned_cols=100 Identities=17% Similarity=0.035 Sum_probs=54.5
Q ss_pred CCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
++.+|+=+|+|. |......+... +.+|+++|.++..++.+++.... .+.....+.
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~------------------Ga~V~~~d~~~~~l~~~~~~~g~------~~~~~~~~~ 222 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGM------------------GATVTVLDINIDKLRQLDAEFCG------RIHTRYSSA 222 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------------------TCEEEEEESCHHHHHHHHHHTTT------SSEEEECCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC------------------CCEEEEEeCCHHHHHHHHHhcCC------eeEeccCCH
Confidence 567899999864 44444444443 37999999999887766553311 121111111
Q ss_pred ccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
.++...-...|+|+..........+.-+.++..+.++|||.++.+
T Consensus 223 ~~l~~~l~~aDvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 223 YELEGAVKRADLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp HHHHHHHHHCSEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred HHHHHHHcCCCEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEE
Confidence 111100124799886432211111111234567788999988754
No 395
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=84.60 E-value=18 Score=31.97 Aligned_cols=102 Identities=10% Similarity=0.058 Sum_probs=66.9
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
.+.+||.++.+-|.++..+... .++.+.-|-......+.++..++++...+.+.... +
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---------------------~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~~-~ 95 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---------------------KPYSIGDSYISELATRENLRLNGIDESSVKFLDST-A 95 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---------------------CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEETT-S
T ss_pred CCCCEEEECCCCCHHHHhhccC---------------------CceEEEhHHHHHHHHHHHHHHcCCCccceEecccc-c
Confidence 4568999999999998777543 22333325555566667777777753346655332 1
Q ss_pred cCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEeccC
Q 036563 163 ALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLELSH 210 (288)
Q Consensus 163 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 210 (288)
.....+|+|+.... .........|..+...|++|+.+++.....
T Consensus 96 ---~~~~~~~~v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~ 139 (375)
T 4dcm_A 96 ---DYPQQPGVVLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGAKAR 139 (375)
T ss_dssp ---CCCSSCSEEEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEGG
T ss_pred ---ccccCCCEEEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEeccc
Confidence 22356999886443 233345667889999999999998765543
No 396
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=84.57 E-value=4.4 Score=35.71 Aligned_cols=94 Identities=13% Similarity=0.149 Sum_probs=56.7
Q ss_pred CCCCCeEEEec-CC-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEE
Q 036563 81 PFPGMKHLDVA-GG-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVE 158 (288)
Q Consensus 81 ~~~~~~vLDiG-~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~ 158 (288)
..++.+||=.| +| .|..+..+++.. ++++++++ ++..++.+++ .+.. ..+.
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~------------------Ga~Vi~~~-~~~~~~~~~~----lGa~----~v~~ 233 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW------------------DAHVTAVC-SQDASELVRK----LGAD----DVID 233 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT------------------TCEEEEEE-CGGGHHHHHH----TTCS----EEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC------------------CCEEEEEe-ChHHHHHHHH----cCCC----EEEE
Confidence 56788999998 44 477777777775 37898888 6666665543 2211 1222
Q ss_pred cccccCC---CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 159 GDAEALC---FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 159 ~d~~~~~---~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
.+-.++. .....+|+|+-... .....+....+.|+++|.++++
T Consensus 234 ~~~~~~~~~~~~~~g~D~vid~~g-----~~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 234 YKSGSVEEQLKSLKPFDFILDNVG-----GSTETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp TTSSCHHHHHHTSCCBSEEEESSC-----TTHHHHGGGGBCSSSCCEEEES
T ss_pred CCchHHHHHHhhcCCCCEEEECCC-----ChhhhhHHHHHhhcCCcEEEEe
Confidence 1111110 01135899874332 2223456778899999999864
No 397
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=84.14 E-value=4.3 Score=34.92 Aligned_cols=99 Identities=15% Similarity=0.120 Sum_probs=59.3
Q ss_pred cCCCCCC-eEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceE
Q 036563 79 LNPFPGM-KHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLL 155 (288)
Q Consensus 79 l~~~~~~-~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~ 155 (288)
....++. +||-+|+ | .|..+..+++.. ++++++++.+++.++.+++. +.. .-+.
T Consensus 144 ~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~------------------Ga~vi~~~~~~~~~~~~~~l----Ga~-~~i~ 200 (328)
T 1xa0_A 144 HGLTPERGPVLVTGATGGVGSLAVSMLAKR------------------GYTVEASTGKAAEHDYLRVL----GAK-EVLA 200 (328)
T ss_dssp TTCCGGGCCEEESSTTSHHHHHHHHHHHHT------------------TCCEEEEESCTTCHHHHHHT----TCS-EEEE
T ss_pred cCCCCCCceEEEecCCCHHHHHHHHHHHHC------------------CCEEEEEECCHHHHHHHHHc----CCc-EEEe
Confidence 3455564 8999997 3 477888888775 37899999988877777542 211 0011
Q ss_pred EEEcccccC-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 156 WVEGDAEAL-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 156 ~~~~d~~~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
....+.... ......+|+++-... . ..+....+.|+++|+++++.
T Consensus 201 ~~~~~~~~~~~~~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 201 REDVMAERIRPLDKQRWAAAVDPVG-----G--RTLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp CC---------CCSCCEEEEEECST-----T--TTHHHHHHTEEEEEEEEECS
T ss_pred cCCcHHHHHHHhcCCcccEEEECCc-----H--HHHHHHHHhhccCCEEEEEe
Confidence 111110001 112346999875432 1 24677889999999998754
No 398
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=84.01 E-value=5.1 Score=35.26 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=58.2
Q ss_pred CCCCeEEEecCC--ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEc
Q 036563 82 FPGMKHLDVAGG--TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEG 159 (288)
Q Consensus 82 ~~~~~vLDiG~G--~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 159 (288)
.++.+||=+|++ .|..+..+++..+ ++++++. +++.++.+++. +. ..++..
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~G------------------a~Vi~~~-~~~~~~~~~~l----Ga----~~vi~~ 215 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSG------------------YIPIATC-SPHNFDLAKSR----GA----EEVFDY 215 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTT------------------CEEEEEE-CGGGHHHHHHT----TC----SEEEET
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCC------------------CEEEEEe-CHHHHHHHHHc----CC----cEEEEC
Confidence 678899999983 5888888888763 7888875 77777766542 21 122322
Q ss_pred ccccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhc-cCCcEEEEEe
Q 036563 160 DAEAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVL-KRGGRFLCLE 207 (288)
Q Consensus 160 d~~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L-~pgG~l~i~~ 207 (288)
.-.++ ....+.+|+|+-.-. ....+..+.+.| +++|+++++.
T Consensus 216 ~~~~~~~~v~~~t~g~~d~v~d~~g------~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 216 RAPNLAQTIRTYTKNNLRYALDCIT------NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp TSTTHHHHHHHHTTTCCCEEEESSC------SHHHHHHHHHHSCTTCEEEEESS
T ss_pred CCchHHHHHHHHccCCccEEEECCC------chHHHHHHHHHhhcCCCEEEEEe
Confidence 11111 112335999873222 235577778888 6999998643
No 399
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=83.83 E-value=6.6 Score=35.48 Aligned_cols=99 Identities=13% Similarity=-0.013 Sum_probs=61.5
Q ss_pred cCCCCCCeEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEE
Q 036563 79 LNPFPGMKHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLW 156 (288)
Q Consensus 79 l~~~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~ 156 (288)
....++.+||=.|+ | .|..+..+++.. ++++++++.+++.++.+++. +.. .-+..
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~------------------Ga~vi~~~~~~~~~~~~~~l----Ga~-~~i~~ 272 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG------------------GGIPVAVVSSAQKEAAVRAL----GCD-LVINR 272 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHHT----TCC-CEEEH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc------------------CCEEEEEeCCHHHHHHHHhc----CCC-EEEec
Confidence 55678889999997 4 377777777765 48899999888887777542 221 11111
Q ss_pred EEccc-------------------ccC-CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 157 VEGDA-------------------EAL-CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 157 ~~~d~-------------------~~~-~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
...|. ..+ ......+|+++-+.. . ..+....+.|+++|.++++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G------~-~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 273 AELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG------R-VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSC------H-HHHHHHHHHSCTTCEEEESC
T ss_pred ccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCC------c-hHHHHHHHHHhcCCEEEEEe
Confidence 11111 000 001246899875332 1 35778889999999998754
No 400
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=83.11 E-value=14 Score=31.59 Aligned_cols=81 Identities=11% Similarity=0.144 Sum_probs=53.0
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
.+.+||=.|++. .++..+++.+.. .+.+|++++.++..++...+.+...+.. .++.++.+|+.
T Consensus 7 ~~k~vlVTGas~-gIG~~la~~l~~---------------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dl~ 69 (319)
T 3ioy_A 7 AGRTAFVTGGAN-GVGIGLVRQLLN---------------QGCKVAIADIRQDSIDKALATLEAEGSG-PEVMGVQLDVA 69 (319)
T ss_dssp TTCEEEEETTTS-THHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHHHTCG-GGEEEEECCTT
T ss_pred CCCEEEEcCCch-HHHHHHHHHHHH---------------CCCEEEEEECCHHHHHHHHHHHHhcCCC-CeEEEEECCCC
Confidence 355777777654 455555555421 3588999999998887776666554321 37888999987
Q ss_pred cCC-----C-----CCCCeeEEEecccc
Q 036563 163 ALC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 163 ~~~-----~-----~~~~~D~v~~~~~l 180 (288)
+.. + .-+..|+++.+..+
T Consensus 70 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 97 (319)
T 3ioy_A 70 SREGFKMAADEVEARFGPVSILCNNAGV 97 (319)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 642 0 11468999887664
No 401
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=83.11 E-value=0.75 Score=41.55 Aligned_cols=42 Identities=17% Similarity=0.217 Sum_probs=33.3
Q ss_pred CCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHH
Q 036563 83 PGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKK 142 (288)
Q Consensus 83 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~ 142 (288)
++.+|+=+|+|. |..+..++... +++|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l------------------Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL------------------GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------------------TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC------------------CCEEEEEcCCHHHHHHHHH
Confidence 467999999986 66666666665 4899999999988777765
No 402
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=83.05 E-value=0.94 Score=40.25 Aligned_cols=100 Identities=14% Similarity=0.123 Sum_probs=52.5
Q ss_pred CCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
++.+|+=+|+|. |......+... +.+|+++|.+++.++.+++.. + ..+.....+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~------------------Ga~V~~~d~~~~~~~~~~~~~---g---~~~~~~~~~~ 220 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGM------------------GAQVTILDVNHKRLQYLDDVF---G---GRVITLTATE 220 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------------------TCEEEEEESCHHHHHHHHHHT---T---TSEEEEECCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhC------------------CCEEEEEECCHHHHHHHHHhc---C---ceEEEecCCH
Confidence 457899999853 33333334433 479999999998776665432 1 1222211121
Q ss_pred ccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
..+...-..+|+|+.+........+.-+.++..+.+++||.++.+
T Consensus 221 ~~l~~~~~~~DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 221 ANIKKSVQHADLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp HHHHHHHHHCSEEEECCC-------CCSCHHHHTTSCTTCEEEEC
T ss_pred HHHHHHHhCCCEEEECCCCCccccchhHHHHHHHhhcCCCEEEEE
Confidence 111100124799876544321111111245667888999988754
No 403
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.88 E-value=18 Score=29.71 Aligned_cols=77 Identities=12% Similarity=0.053 Sum_probs=52.6
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+.++|=.|++. .++..+++.+.. .+.+|+.+|.++..++...+.+...+ .++.++.+|+.+
T Consensus 7 ~k~vlVTGas~-GIG~aia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 67 (252)
T 3h7a_A 7 NATVAVIGAGD-YIGAEIAKKFAA---------------EGFTVFAGRRNGEKLAPLVAEIEAAG---GRIVARSLDARN 67 (252)
T ss_dssp SCEEEEECCSS-HHHHHHHHHHHH---------------TTCEEEEEESSGGGGHHHHHHHHHTT---CEEEEEECCTTC
T ss_pred CCEEEEECCCc-hHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHHHhcC---CeEEEEECcCCC
Confidence 45677777665 455555555421 35899999999988877777666553 578899999876
Q ss_pred CC----------CCCCCeeEEEecccc
Q 036563 164 LC----------FEDSTMDGYTIAFGI 180 (288)
Q Consensus 164 ~~----------~~~~~~D~v~~~~~l 180 (288)
.. .. +..|+++.+...
T Consensus 68 ~~~v~~~~~~~~~~-g~id~lv~nAg~ 93 (252)
T 3h7a_A 68 EDEVTAFLNAADAH-APLEVTIFNVGA 93 (252)
T ss_dssp HHHHHHHHHHHHHH-SCEEEEEECCCC
T ss_pred HHHHHHHHHHHHhh-CCceEEEECCCc
Confidence 42 11 478998877664
No 404
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=82.66 E-value=3.6 Score=31.91 Aligned_cols=106 Identities=14% Similarity=0.138 Sum_probs=65.4
Q ss_pred HHHHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCC
Q 036563 73 DRLVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDK 152 (288)
Q Consensus 73 ~~~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~ 152 (288)
+.........+ +-|||+|-|+|..=-++.+.+ |+.+++++|-.-.. .-.. .+ +
T Consensus 31 ~~a~~~v~~~~-GpVlElGLGNGRTydHLRe~~-----------------P~R~I~vfDR~~~~------hp~~--~P-~ 83 (174)
T 3iht_A 31 EHAIAQTAGLS-GPVYELGLGNGRTYHHLRQHV-----------------QGREIYVFERAVAS------HPDS--TP-P 83 (174)
T ss_dssp HHHHHHTTTCC-SCEEEECCTTCHHHHHHHHHC-----------------CSSCEEEEESSCCC------CGGG--CC-C
T ss_pred HHHHHHhcCCC-CceEEecCCCChhHHHHHHhC-----------------CCCcEEEEEeeecc------CCCC--CC-c
Confidence 44455555444 469999999999999999998 68999999952211 0000 11 3
Q ss_pred ceEEEEcccccC-CC----CCCCeeEEEeccccccccCHHH----HHHHHHhhccCCcEEEE
Q 036563 153 SLLWVEGDAEAL-CF----EDSTMDGYTIAFGIRNVTHIEK----ALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 153 ~v~~~~~d~~~~-~~----~~~~~D~v~~~~~l~~~~~~~~----~l~~~~~~L~pgG~l~i 205 (288)
.-.++.+|+.+. +. -..+.-++.+....++-..-.. +-.-+..+|.|||.++-
T Consensus 84 ~e~~ilGdi~~tL~~~~~r~g~~a~LaHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS 145 (174)
T 3iht_A 84 EAQLILGDIRETLPATLERFGATASLVHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVS 145 (174)
T ss_dssp GGGEEESCHHHHHHHHHHHHCSCEEEEEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred hHheecccHHHHHHHHHHhcCCceEEEEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEe
Confidence 456788887653 21 1334566666555444322111 23356788999998873
No 405
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=82.61 E-value=14 Score=31.15 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=64.3
Q ss_pred CCCeEEEecCCcc-HHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGTG-DVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++++|=.|++.| .++..+++.+.. .+.+|+.++.++...+.+++..... .++.++.+|+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~---------------~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv 90 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAARE---------------AGAELAFTYQGDALKKRVEPLAEEL----GAFVAGHCDV 90 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHH---------------TTCEEEEEECSHHHHHHHHHHHHHH----TCEEEEECCT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH---------------CCCEEEEEcCCHHHHHHHHHHHHhc----CCceEEECCC
Confidence 4567888887643 344445444321 3478999998876555554444433 3578888998
Q ss_pred ccCC----------CCCCCeeEEEecccccc----------cc--CH-----------HHHHHHHHhhccCCcEEEEEec
Q 036563 162 EALC----------FEDSTMDGYTIAFGIRN----------VT--HI-----------EKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 162 ~~~~----------~~~~~~D~v~~~~~l~~----------~~--~~-----------~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+.. ..-+..|+++.+..+.. .+ +. ..+++.+.+.++++|.++.+..
T Consensus 91 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS 170 (293)
T 3grk_A 91 ADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTY 170 (293)
T ss_dssp TCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence 7642 01136899987765432 10 11 2245667777888898887543
No 406
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=82.16 E-value=12 Score=30.81 Aligned_cols=103 Identities=11% Similarity=0.143 Sum_probs=64.4
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
.++++|=.|++. .++..+++.+.. .+.+|+.+|.++..++...+... .++.++.+|+.
T Consensus 7 ~gk~~lVTGas~-gIG~a~a~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~Dv~ 64 (255)
T 4eso_A 7 QGKKAIVIGGTH-GMGLATVRRLVE---------------GGAEVLLTGRNESNIARIREEFG------PRVHALRSDIA 64 (255)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHG------GGEEEEECCTT
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHhC------CcceEEEccCC
Confidence 356777777654 455555555421 35899999999887766655442 46888999987
Q ss_pred cCC----------CCCCCeeEEEecccccccc-----C---H-----------HHHHHHHHhhccCCcEEEEEe
Q 036563 163 ALC----------FEDSTMDGYTIAFGIRNVT-----H---I-----------EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 163 ~~~----------~~~~~~D~v~~~~~l~~~~-----~---~-----------~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+.. ..-+..|+++.+....... + . ..+.+.+.+.++++|.++.+.
T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 65 DLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp CHHHHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 642 0113689988766543221 1 1 124566677777888888653
No 407
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.91 E-value=6.6 Score=35.37 Aligned_cols=93 Identities=15% Similarity=0.112 Sum_probs=59.0
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
..+|+=+|+| .++..+++.+.. .+..|+++|.+++.++.+++. .+.++.+|+.+
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~---------------~g~~vvvId~d~~~v~~~~~~---------g~~vi~GDat~ 57 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLS---------------SGVKMVVLDHDPDHIETLRKF---------GMKVFYGDATR 57 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHH---------------TTCCEEEEECCHHHHHHHHHT---------TCCCEESCTTC
T ss_pred CCeEEEECCC--HHHHHHHHHHHH---------------CCCCEEEEECCHHHHHHHHhC---------CCeEEEcCCCC
Confidence 4578888875 455555554421 247899999999988877642 45678888876
Q ss_pred CC----CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 164 LC----FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 164 ~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
.. ..-...|+|++... . +.....+....+.+.|+..+++
T Consensus 58 ~~~L~~agi~~A~~viv~~~--~-~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 58 MDLLESAGAAKAEVLINAID--D-PQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp HHHHHHTTTTTCSEEEECCS--S-HHHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHHHhcCCCccCEEEECCC--C-hHHHHHHHHHHHHhCCCCeEEE
Confidence 42 22346888876442 1 1122345556677788888776
No 408
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=81.70 E-value=9.7 Score=32.24 Aligned_cols=107 Identities=17% Similarity=0.156 Sum_probs=65.2
Q ss_pred CCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++++|=.|++. +.++..+++.+.. .+++|+.+|.++...+...+..... ..+.++.+|+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~---------------~G~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~Dv 89 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCA---------------QGAEVALTYLSETFKKRVDPLAESL----GVKLTVPCDV 89 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH---------------TTCEEEEEESSGGGHHHHHHHHHHH----TCCEEEECCT
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHH---------------CCCEEEEEeCChHHHHHHHHHHHhc----CCeEEEEcCC
Confidence 356788888754 3455555555421 3588999999876665555544443 3467888898
Q ss_pred ccCC-----C-----CCCCeeEEEeccccccc----------c--CH-----------HHHHHHHHhhccCCcEEEEEec
Q 036563 162 EALC-----F-----EDSTMDGYTIAFGIRNV----------T--HI-----------EKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 162 ~~~~-----~-----~~~~~D~v~~~~~l~~~----------~--~~-----------~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+.. + .-+..|+++.+..+... + +. ..+++.+.+.++.+|.++.+..
T Consensus 90 ~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS 169 (296)
T 3k31_A 90 SDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSY 169 (296)
T ss_dssp TCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEe
Confidence 7642 0 01368999887654321 0 11 2245666777778898887543
No 409
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=81.16 E-value=14 Score=30.94 Aligned_cols=80 Identities=9% Similarity=0.075 Sum_probs=52.8
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+.+||=.|++ |.++..+++.+.. .+.+|++++.++...+.+.+.+...+. .++.++.+|+.+
T Consensus 12 ~k~vlITGas-~GIG~~~a~~L~~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl~~ 73 (311)
T 3o26_A 12 RRCAVVTGGN-KGIGFEICKQLSS---------------NGIMVVLTCRDVTKGHEAVEKLKNSNH--ENVVFHQLDVTD 73 (311)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHTTTC--CSEEEEECCTTS
T ss_pred CcEEEEecCC-chHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHHHhcCC--CceEEEEccCCC
Confidence 4567766655 5566666665421 358999999998877777666655432 478899999876
Q ss_pred C-C--------C--CCCCeeEEEeccccc
Q 036563 164 L-C--------F--EDSTMDGYTIAFGIR 181 (288)
Q Consensus 164 ~-~--------~--~~~~~D~v~~~~~l~ 181 (288)
. . . .-+..|+++.+..+.
T Consensus 74 ~~~~v~~~~~~~~~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 74 PIATMSSLADFIKTHFGKLDILVNNAGVA 102 (311)
T ss_dssp CHHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEECCccc
Confidence 5 2 0 013689998877643
No 410
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=81.09 E-value=21 Score=29.32 Aligned_cols=109 Identities=12% Similarity=0.156 Sum_probs=65.1
Q ss_pred CCCeEEEecCCcc-HHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGTG-DVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.+.++|=.|++.+ .++..+++.+.. .+.+++.++.++...+...+.....+- .++.++.+|+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~ 68 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHE---------------AGARLIFTYAGERLEKSVHELAGTLDR--NDSIILPCDV 68 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHH---------------TTCEEEEEESSGGGHHHHHHHHHTSSS--CCCEEEECCC
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHH---------------CCCEEEEecCchHHHHHHHHHHHhcCC--CCceEEeCCC
Confidence 3567787777522 244444444321 357899999887666655555444331 3688999998
Q ss_pred ccCC-----C-----CCCCeeEEEecccccc-------cc--CH--------------HHHHHHHHhhccCCcEEEEEec
Q 036563 162 EALC-----F-----EDSTMDGYTIAFGIRN-------VT--HI--------------EKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 162 ~~~~-----~-----~~~~~D~v~~~~~l~~-------~~--~~--------------~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+.. + .-+..|+++.+..+.. +. +. ..+++.+.+.++++|.++.+..
T Consensus 69 ~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS 148 (266)
T 3oig_A 69 TNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTY 148 (266)
T ss_dssp SSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEec
Confidence 7652 0 0136898887665432 10 11 1245667778888898887543
No 411
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=80.94 E-value=15 Score=31.04 Aligned_cols=80 Identities=16% Similarity=0.145 Sum_probs=53.7
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
..+.+||=.|++. .++..+++.+.. .+.+|+.++.++..++...+.+...+ .++.++.+|+
T Consensus 29 l~gk~vlVTGas~-gIG~~la~~l~~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv 89 (301)
T 3tjr_A 29 FDGRAAVVTGGAS-GIGLATATEFAR---------------RGARLVLSDVDQPALEQAVNGLRGQG---FDAHGVVCDV 89 (301)
T ss_dssp STTCEEEEETTTS-HHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCT
T ss_pred cCCCEEEEeCCCC-HHHHHHHHHHHH---------------CCCEEEEEECCHHHHHHHHHHHHhcC---CceEEEEccC
Confidence 3456788777764 455555555421 35889999999988887777666544 4688999998
Q ss_pred ccCC-----C-----CCCCeeEEEecccc
Q 036563 162 EALC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 162 ~~~~-----~-----~~~~~D~v~~~~~l 180 (288)
.+.. + .-+..|+++.+..+
T Consensus 90 ~d~~~v~~~~~~~~~~~g~id~lvnnAg~ 118 (301)
T 3tjr_A 90 RHLDEMVRLADEAFRLLGGVDVVFSNAGI 118 (301)
T ss_dssp TCHHHHHHHHHHHHHHHSSCSEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEECCCc
Confidence 7642 0 01368998887654
No 412
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=80.54 E-value=20 Score=29.57 Aligned_cols=109 Identities=11% Similarity=0.080 Sum_probs=66.3
Q ss_pred CCCeEEEecCCcc-HHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGTG-DVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~G-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++++|=-|++++ .++..+++.+.. .+++|..+|.++..++.+.+.+.+.+- .++.++.+|+
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~---------------~Ga~Vvi~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv 67 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQ---------------LGAKLVFTYRKERSRKELEKLLEQLNQ--PEAHLYQIDV 67 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHH---------------TTCEEEEEESSGGGHHHHHHHHGGGTC--SSCEEEECCT
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHH---------------CCCEEEEEECCHHHHHHHHHHHHhcCC--CcEEEEEccC
Confidence 4667887786431 344444444321 358999999999888888777766542 3688888998
Q ss_pred ccCC----------CCCCCeeEEEeccccccc-------c--CHH--------------HHHHHHHhhccCCcEEEEEec
Q 036563 162 EALC----------FEDSTMDGYTIAFGIRNV-------T--HIE--------------KALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 162 ~~~~----------~~~~~~D~v~~~~~l~~~-------~--~~~--------------~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+.. ..-+..|+++.+..+... . ..+ ...+.....++.+|.++.+..
T Consensus 68 ~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS 147 (256)
T 4fs3_A 68 QSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTY 147 (256)
T ss_dssp TCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEec
Confidence 6531 112468988876543211 1 111 123345567778999886543
No 413
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=80.21 E-value=4.2 Score=35.59 Aligned_cols=97 Identities=15% Similarity=0.077 Sum_probs=55.6
Q ss_pred cCCCCC-CeEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhH----HHHHHHHhhhcCCCC
Q 036563 79 LNPFPG-MKHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNM----LNVGKKRALERGYPD 151 (288)
Q Consensus 79 l~~~~~-~~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~----~~~a~~~~~~~~~~~ 151 (288)
....++ .+||=.|+ | .|..+..+++..+ ++++++..+++. .+.++ ..+..
T Consensus 162 ~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G------------------a~vi~~~~~~~~~~~~~~~~~----~lGa~- 218 (364)
T 1gu7_A 162 VKLTPGKDWFIQNGGTSAVGKYASQIGKLLN------------------FNSISVIRDRPNLDEVVASLK----ELGAT- 218 (364)
T ss_dssp SCCCTTTCEEEESCTTSHHHHHHHHHHHHHT------------------CEEEEEECCCTTHHHHHHHHH----HHTCS-
T ss_pred hccCCCCcEEEECCCCcHHHHHHHHHHHHCC------------------CEEEEEecCccccHHHHHHHH----hcCCe-
Confidence 356678 89999987 4 4788888888763 677777654443 23332 22321
Q ss_pred CceEEEEc------cccc-C-CC---CCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 152 KSLLWVEG------DAEA-L-CF---EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 152 ~~v~~~~~------d~~~-~-~~---~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.++.. |+.+ + .. ....+|+|+-.-. ..... ...+.|+++|+++++..
T Consensus 219 ---~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G------~~~~~-~~~~~l~~~G~~v~~g~ 276 (364)
T 1gu7_A 219 ---QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG------GKSST-GIARKLNNNGLMLTYGG 276 (364)
T ss_dssp ---EEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSC------HHHHH-HHHHTSCTTCEEEECCC
T ss_pred ---EEEecCccchHHHHHHHHHHhhccCCCceEEEECCC------chhHH-HHHHHhccCCEEEEecC
Confidence 12221 1110 1 01 1246999974322 22333 66799999999987543
No 414
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=80.08 E-value=20 Score=29.67 Aligned_cols=106 Identities=16% Similarity=0.118 Sum_probs=64.2
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCC------------hhHHHHHHHHhhhcCCC
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDIN------------PNMLNVGKKRALERGYP 150 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s------------~~~~~~a~~~~~~~~~~ 150 (288)
.++++|=.|++. .++..+++.+.. .+.+|+.+|.+ ...++.........+
T Consensus 9 ~gk~vlVTGas~-gIG~~ia~~l~~---------------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 70 (287)
T 3pxx_A 9 QDKVVLVTGGAR-GQGRSHAVKLAE---------------EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG-- 70 (287)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH---------------TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--
T ss_pred CCCEEEEeCCCC-hHHHHHHHHHHH---------------CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--
Confidence 355677777654 455555555421 35889999986 555555555554443
Q ss_pred CCceEEEEcccccCC-----C-----CCCCeeEEEeccccccc------cCH-----------HHHHHHHHhhccCCcEE
Q 036563 151 DKSLLWVEGDAEALC-----F-----EDSTMDGYTIAFGIRNV------THI-----------EKALAEAYRVLKRGGRF 203 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~-----~-----~~~~~D~v~~~~~l~~~------~~~-----------~~~l~~~~~~L~pgG~l 203 (288)
.++.++.+|+.+.. + .-+..|+++.+...... .+. ..+++.+.+.++.+|.+
T Consensus 71 -~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~i 149 (287)
T 3pxx_A 71 -RKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASI 149 (287)
T ss_dssp -SCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEE
T ss_pred -CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEE
Confidence 47888999987642 0 01368998877654321 111 22456677777888888
Q ss_pred EEEe
Q 036563 204 LCLE 207 (288)
Q Consensus 204 ~i~~ 207 (288)
+.+.
T Consensus 150 v~is 153 (287)
T 3pxx_A 150 ITTG 153 (287)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7643
No 415
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=79.93 E-value=15 Score=26.58 Aligned_cols=93 Identities=14% Similarity=0.192 Sum_probs=51.5
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+++|+=+|+ |..+..++..+.. .+.+++++|.+++..+...+. ..+.++.+|..+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~---------------~g~~v~~~d~~~~~~~~~~~~--------~~~~~~~~d~~~ 58 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSE---------------KGHDIVLIDIDKDICKKASAE--------IDALVINGDCTK 58 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHH--------CSSEEEESCTTS
T ss_pred CCEEEEECC--CHHHHHHHHHHHh---------------CCCeEEEEECCHHHHHHHHHh--------cCcEEEEcCCCC
Confidence 467888877 5566666555421 247899999988766554432 134556666543
Q ss_pred CC----CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 164 LC----FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 164 ~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
.. ..-..+|+|+..... ......+..+.+.+.++ .+++
T Consensus 59 ~~~l~~~~~~~~d~vi~~~~~---~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 59 IKTLEDAGIEDADMYIAVTGK---EEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp HHHHHHTTTTTCSEEEECCSC---HHHHHHHHHHHHHTTCC-CEEE
T ss_pred HHHHHHcCcccCCEEEEeeCC---chHHHHHHHHHHHcCCC-EEEE
Confidence 21 112358988875321 11223444555667765 4443
No 416
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=79.35 E-value=21 Score=28.49 Aligned_cols=92 Identities=14% Similarity=0.069 Sum_probs=55.8
Q ss_pred eEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCC
Q 036563 86 KHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALC 165 (288)
Q Consensus 86 ~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~ 165 (288)
+|+=+|+ |.++..+++.+.. .+..++++|.+++.++...+. .+..++.+|..+..
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~---------------~g~~v~vid~~~~~~~~l~~~--------~~~~~i~gd~~~~~ 56 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLS---------------RKYGVVIINKDRELCEEFAKK--------LKATIIHGDGSHKE 56 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHH---------------TTCCEEEEESCHHHHHHHHHH--------SSSEEEESCTTSHH
T ss_pred EEEEECC--CHHHHHHHHHHHh---------------CCCeEEEEECCHHHHHHHHHH--------cCCeEEEcCCCCHH
Confidence 5666665 6777777776531 347899999999877654432 24667888876531
Q ss_pred ----CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 166 ----FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 166 ----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
..-..+|++++...- +.....+....+.+.+...+++
T Consensus 57 ~l~~a~i~~ad~vi~~~~~---d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 57 ILRDAEVSKNDVVVILTPR---DEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp HHHHHTCCTTCEEEECCSC---HHHHHHHHHHHHHTSCCCEEEE
T ss_pred HHHhcCcccCCEEEEecCC---cHHHHHHHHHHHHHcCCCeEEE
Confidence 112468988864321 1122344455555666667664
No 417
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=79.21 E-value=1.4 Score=38.35 Aligned_cols=54 Identities=19% Similarity=0.061 Sum_probs=38.9
Q ss_pred ceEEE-EcccccC--CCCCCCeeEEEeccccccc-------c----CHHHHHHHHHhhccCCcEEEEE
Q 036563 153 SLLWV-EGDAEAL--CFEDSTMDGYTIAFGIRNV-------T----HIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 153 ~v~~~-~~d~~~~--~~~~~~~D~v~~~~~l~~~-------~----~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
...++ ++|+... .++++++|+|++......- . -....|.++.++|+|||.+++.
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 45667 8887653 3456789999998765321 1 2356788899999999999874
No 418
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=78.96 E-value=13 Score=31.42 Aligned_cols=103 Identities=15% Similarity=0.226 Sum_probs=64.6
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
.++.+|=-|++.| ++..+++.+.. .+++|..+|.+++.++.+.+.+ + .+...+.+|+.
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~---------------~Ga~V~i~~r~~~~l~~~~~~~---g---~~~~~~~~Dv~ 85 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVA---------------EGARVFITGRRKDVLDAAIAEI---G---GGAVGIQADSA 85 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHH---C---TTCEEEECCTT
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHH---------------CCCEEEEEECCHHHHHHHHHHc---C---CCeEEEEecCC
Confidence 3566777776665 44555554421 4589999999998877665544 2 35777888886
Q ss_pred cCC----------CCCCCeeEEEeccccccc------c--CH-----------HHHHHHHHhhccCCcEEEEEe
Q 036563 163 ALC----------FEDSTMDGYTIAFGIRNV------T--HI-----------EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 163 ~~~----------~~~~~~D~v~~~~~l~~~------~--~~-----------~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+.. ..-+..|+++.+...... + +. -...+.+.+.|+.+|.++.+.
T Consensus 86 ~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 86 NLAELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp CHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 642 112468998876653222 1 11 224667778888888887653
No 419
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=78.70 E-value=5.3 Score=34.73 Aligned_cols=90 Identities=8% Similarity=0.025 Sum_probs=53.1
Q ss_pred CeEEEe-cCC-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 85 MKHLDV-AGG-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 85 ~~vLDi-G~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
.+||=. |+| .|..+..+++.. ++++++++.+++.++.+++. +. ...+..+-.
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~------------------Ga~Vi~~~~~~~~~~~~~~~----Ga----~~~~~~~~~ 219 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE------------------GFRPIVTVRRDEQIALLKDI----GA----AHVLNEKAP 219 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH------------------TCEEEEEESCGGGHHHHHHH----TC----SEEEETTST
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHHc----CC----CEEEECCcH
Confidence 355533 444 366666666665 37999999999888877643 21 122222111
Q ss_pred cCC-----C-CCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 163 ALC-----F-EDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 163 ~~~-----~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
++. . ....+|+++-... ...+..+.+.|+++|.++++.
T Consensus 220 ~~~~~v~~~~~~~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G 263 (349)
T 3pi7_A 220 DFEATLREVMKAEQPRIFLDAVT-------GPLASAIFNAMPKRARWIIYG 263 (349)
T ss_dssp THHHHHHHHHHHHCCCEEEESSC-------HHHHHHHHHHSCTTCEEEECC
T ss_pred HHHHHHHHHhcCCCCcEEEECCC-------ChhHHHHHhhhcCCCEEEEEe
Confidence 110 0 1135899875332 123467889999999999754
No 420
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=78.67 E-value=1.5 Score=39.07 Aligned_cols=42 Identities=14% Similarity=0.147 Sum_probs=31.8
Q ss_pred CCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHH
Q 036563 83 PGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKK 142 (288)
Q Consensus 83 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~ 142 (288)
++.+|+=+|+|. |..+..++..+ +.+|+++|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~------------------Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL------------------GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------------------TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHH
Confidence 578999999985 66666666665 3789999999887776654
No 421
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=78.52 E-value=1.1 Score=40.36 Aligned_cols=42 Identities=17% Similarity=0.270 Sum_probs=31.7
Q ss_pred CCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHH
Q 036563 83 PGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKK 142 (288)
Q Consensus 83 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~ 142 (288)
++.+|+=+|+|. |..+..++..+ +.+|+++|.++..++.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~------------------Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL------------------GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT------------------TCEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC------------------CCEEEEEcCCHHHHHHHHH
Confidence 467899999985 66666666665 3789999999988776643
No 422
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=77.71 E-value=21 Score=30.65 Aligned_cols=81 Identities=17% Similarity=0.188 Sum_probs=46.2
Q ss_pred eEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 126 RIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 126 ~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
+|+++|.+++.++.+.+. +. +.-...|..+. .-...|+|+..-... ....+++++...++++..++
T Consensus 60 ~V~~~dr~~~~~~~a~~~----G~----~~~~~~~~~~~--~~~~aDvVilavp~~---~~~~vl~~l~~~l~~~~iv~- 125 (314)
T 3ggo_A 60 KIYGYDINPESISKAVDL----GI----IDEGTTSIAKV--EDFSPDFVMLSSPVR---TFREIAKKLSYILSEDATVT- 125 (314)
T ss_dssp EEEEECSCHHHHHHHHHT----TS----CSEEESCTTGG--GGGCCSEEEECSCGG---GHHHHHHHHHHHSCTTCEEE-
T ss_pred EEEEEECCHHHHHHHHHC----CC----cchhcCCHHHH--hhccCCEEEEeCCHH---HHHHHHHHHhhccCCCcEEE-
Confidence 899999999877765432 21 11122333320 113479988765433 34667888989999887654
Q ss_pred EeccCCChHHHHHHHH
Q 036563 206 LELSHVDIPVFKELYD 221 (288)
Q Consensus 206 ~~~~~~~~~~~~~~~~ 221 (288)
+.+.........+..
T Consensus 126 -d~~Svk~~~~~~~~~ 140 (314)
T 3ggo_A 126 -DQGSVKGKLVYDLEN 140 (314)
T ss_dssp -ECCSCCTHHHHHHHH
T ss_pred -ECCCCcHHHHHHHHH
Confidence 333333333444433
No 423
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=77.66 E-value=26 Score=28.74 Aligned_cols=80 Identities=18% Similarity=0.147 Sum_probs=50.8
Q ss_pred CCCeEEEecC-CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAG-GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~-G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.+.++|=.|+ |.|. +..+++.+.. .+.+++.++.++..++...+.+...+. .++.++.+|+
T Consensus 21 ~~k~vlITGasg~GI-G~~~a~~l~~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~~--~~~~~~~~Dl 82 (266)
T 3o38_A 21 KGKVVLVTAAAGTGI-GSTTARRALL---------------EGADVVISDYHERRLGETRDQLADLGL--GRVEAVVCDV 82 (266)
T ss_dssp TTCEEEESSCSSSSH-HHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHTTCS--SCEEEEECCT
T ss_pred CCCEEEEECCCCCch-HHHHHHHHHH---------------CCCEEEEecCCHHHHHHHHHHHHhcCC--CceEEEEeCC
Confidence 3567777776 4443 3334443321 358899999998887777766644432 4789999998
Q ss_pred ccCC-----C-----CCCCeeEEEecccc
Q 036563 162 EALC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 162 ~~~~-----~-----~~~~~D~v~~~~~l 180 (288)
.+.. + .-+..|+++.+..+
T Consensus 83 ~~~~~v~~~~~~~~~~~g~id~li~~Ag~ 111 (266)
T 3o38_A 83 TSTEAVDALITQTVEKAGRLDVLVNNAGL 111 (266)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHhCCCcEEEECCCc
Confidence 7642 0 01368999887664
No 424
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=77.60 E-value=23 Score=29.45 Aligned_cols=80 Identities=19% Similarity=0.205 Sum_probs=53.5
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
.++.+|=-|++.| ++..+++.+.. .+++|..+|.+++.++...+.+...+ .++..+.+|+.
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~---------------~Ga~Vvi~~~~~~~~~~~~~~l~~~g---~~~~~~~~Dv~ 68 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAA---------------AGARVILNDIRATLLAESVDTLTRKG---YDAHGVAFDVT 68 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHH---------------TTCEEEECCSCHHHHHHHHHHHHHTT---CCEEECCCCTT
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHH---------------CCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEeeCC
Confidence 3556666666554 45555555421 45899999999998888777776655 46888888886
Q ss_pred cCC----------CCCCCeeEEEeccccc
Q 036563 163 ALC----------FEDSTMDGYTIAFGIR 181 (288)
Q Consensus 163 ~~~----------~~~~~~D~v~~~~~l~ 181 (288)
+.. ..-+..|+++.+....
T Consensus 69 ~~~~v~~~~~~~~~~~G~iDiLVNNAG~~ 97 (255)
T 4g81_D 69 DELAIEAAFSKLDAEGIHVDILINNAGIQ 97 (255)
T ss_dssp CHHHHHHHHHHHHHTTCCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHCCCCcEEEECCCCC
Confidence 631 1224689988776543
No 425
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=77.45 E-value=11 Score=30.98 Aligned_cols=105 Identities=13% Similarity=0.105 Sum_probs=63.8
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+.+||=.| |+|.++..+++.+... .+.++++++.++...+...+.+...+ .++.++.+|+.+
T Consensus 4 ~k~vlITG-asggIG~~~a~~L~~~--------------~g~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dl~~ 65 (276)
T 1wma_A 4 IHVALVTG-GNKGIGLAIVRDLCRL--------------FSGDVVLTARDVTRGQAAVQQLQAEG---LSPRFHQLDIDD 65 (276)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHH--------------SSSEEEEEESSHHHHHHHHHHHHHTT---CCCEEEECCTTC
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHh--------------cCCeEEEEeCChHHHHHHHHHHHhcC---CeeEEEECCCCC
Confidence 45666555 5677777777765310 14789999998877666655554433 468888999876
Q ss_pred CC-----CC-----CCCeeEEEeccccccc--------cCH-----------HHHHHHHHhhccCCcEEEEE
Q 036563 164 LC-----FE-----DSTMDGYTIAFGIRNV--------THI-----------EKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 164 ~~-----~~-----~~~~D~v~~~~~l~~~--------~~~-----------~~~l~~~~~~L~pgG~l~i~ 206 (288)
.. +. -+.+|+++.+...... .+. ..+++.+.+.++++|.++.+
T Consensus 66 ~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 66 LQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 42 00 1268998876543211 111 22455666777777887764
No 426
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=77.29 E-value=28 Score=29.16 Aligned_cols=106 Identities=14% Similarity=0.130 Sum_probs=62.5
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChh-HHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPN-MLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~-~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++++|=.|++. .++..+++.+.. .+.+++.++.+.. ..+...+.....+ .++.++.+|+
T Consensus 46 ~gk~vlVTGas~-GIG~aia~~la~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~Dv 106 (291)
T 3ijr_A 46 KGKNVLITGGDS-GIGRAVSIAFAK---------------EGANIAIAYLDEEGDANETKQYVEKEG---VKCVLLPGDL 106 (291)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH---------------TTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEESCT
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHH---------------CCCEEEEEeCCchHHHHHHHHHHHhcC---CcEEEEECCC
Confidence 356777777654 455555555421 3578999998765 3333433333333 4688899998
Q ss_pred ccCC-----C-----CCCCeeEEEeccccccc-------c--CH-----------HHHHHHHHhhccCCcEEEEEe
Q 036563 162 EALC-----F-----EDSTMDGYTIAFGIRNV-------T--HI-----------EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 162 ~~~~-----~-----~~~~~D~v~~~~~l~~~-------~--~~-----------~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.+.. + .-+..|+++.+...... + +. ..+++.+.+.++.+|.++.+.
T Consensus 107 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 107 SDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp TSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 7642 0 01368998876543211 1 11 234667777888889887653
No 427
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=77.12 E-value=14 Score=30.53 Aligned_cols=106 Identities=10% Similarity=0.092 Sum_probs=62.4
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEE-eCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVC-DINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++++|=.|++.| ++..+++.+.. .+.+++.+ +.++...+...+.+...+ .++.++.+|+
T Consensus 7 ~~k~vlVTGas~G-IG~aia~~la~---------------~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv 67 (259)
T 3edm_A 7 TNRTIVVAGAGRD-IGRACAIRFAQ---------------EGANVVLTYNGAAEGAATAVAEIEKLG---RSALAIKADL 67 (259)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHH---------------TTCEEEEEECSSCHHHHHHHHHHHTTT---SCCEEEECCT
T ss_pred CCCEEEEECCCch-HHHHHHHHHHH---------------CCCEEEEEcCCCHHHHHHHHHHHHhcC---CceEEEEcCC
Confidence 3567777776554 55555555421 34788877 666666665555554433 4688899998
Q ss_pred ccCC-----C-----CCCCeeEEEeccccc-c---cc--CH--------------HHHHHHHHhhccCCcEEEEEe
Q 036563 162 EALC-----F-----EDSTMDGYTIAFGIR-N---VT--HI--------------EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 162 ~~~~-----~-----~~~~~D~v~~~~~l~-~---~~--~~--------------~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.+.. + .-+..|+++.+.... . +. +. ..+.+.+.+.++++|.++.+.
T Consensus 68 ~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 68 TNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp TCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 7642 0 013689988766432 1 11 11 224566677777788887653
No 428
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=76.99 E-value=26 Score=28.71 Aligned_cols=107 Identities=16% Similarity=0.169 Sum_probs=61.3
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+.++|=.|+ +|.++..+++.+.. .+.+|++++.++...+...+.+...... .++.++.+|+.+
T Consensus 7 ~k~vlVTGa-s~gIG~~ia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~ 69 (267)
T 2gdz_A 7 GKVALVTGA-AQGIGRAFAEALLL---------------KGAKVALVDWNLEAGVQCKAALHEQFEP-QKTLFIQCDVAD 69 (267)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHTTTSCG-GGEEEEECCTTS
T ss_pred CCEEEEECC-CCcHHHHHHHHHHH---------------CCCEEEEEECCHHHHHHHHHHHHhhcCC-CceEEEecCCCC
Confidence 456777765 55566666665421 3588999999887665554444321101 367888899865
Q ss_pred CC-----CC-----CCCeeEEEeccccccccCHHH-----------HHHHHHhhccC-----CcEEEEEe
Q 036563 164 LC-----FE-----DSTMDGYTIAFGIRNVTHIEK-----------ALAEAYRVLKR-----GGRFLCLE 207 (288)
Q Consensus 164 ~~-----~~-----~~~~D~v~~~~~l~~~~~~~~-----------~l~~~~~~L~p-----gG~l~i~~ 207 (288)
.. +. -+..|+++.+.......+... ..+.+.+.++. +|.++.+.
T Consensus 70 ~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~is 139 (267)
T 2gdz_A 70 QQQLRDTFRKVVDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS 139 (267)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeC
Confidence 31 00 135799887766543333322 23445555543 57777653
No 429
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=76.96 E-value=24 Score=29.35 Aligned_cols=78 Identities=13% Similarity=0.158 Sum_probs=51.4
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+.++|=.|++ |.++..+++.+.. .+.+|+.+|.++...+...+.+...+ .++.++.+|+.+
T Consensus 33 gk~~lVTGas-~GIG~aia~~la~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 93 (275)
T 4imr_A 33 GRTALVTGSS-RGIGAAIAEGLAG---------------AGAHVILHGVKPGSTAAVQQRIIASG---GTAQELAGDLSE 93 (275)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHH---------------TTCEEEEEESSTTTTHHHHHHHHHTT---CCEEEEECCTTS
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH---------------CCCEEEEEcCCHHHHHHHHHHHHhcC---CeEEEEEecCCC
Confidence 5567766654 5555566555421 35899999998887777666665543 478889999876
Q ss_pred CC---------CCCCCeeEEEecccc
Q 036563 164 LC---------FEDSTMDGYTIAFGI 180 (288)
Q Consensus 164 ~~---------~~~~~~D~v~~~~~l 180 (288)
.. ...+..|+++.+...
T Consensus 94 ~~~~~~~~~~~~~~g~iD~lvnnAg~ 119 (275)
T 4imr_A 94 AGAGTDLIERAEAIAPVDILVINASA 119 (275)
T ss_dssp TTHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 42 001468998877654
No 430
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=76.80 E-value=20 Score=29.96 Aligned_cols=80 Identities=14% Similarity=0.134 Sum_probs=49.4
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeC-ChhHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDI-NPNMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~-s~~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
..++++|=.|++. .++..+++.+.. .+.+++.+|. +++.++...+.+...+ .++.++.+|
T Consensus 27 ~~~k~~lVTGas~-GIG~aia~~la~---------------~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D 87 (280)
T 4da9_A 27 KARPVAIVTGGRR-GIGLGIARALAA---------------SGFDIAITGIGDAEGVAPVIAELSGLG---ARVIFLRAD 87 (280)
T ss_dssp CCCCEEEEETTTS-HHHHHHHHHHHH---------------TTCEEEEEESCCHHHHHHHHHHHHHTT---CCEEEEECC
T ss_pred cCCCEEEEecCCC-HHHHHHHHHHHH---------------CCCeEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEec
Confidence 3455677676654 455555555421 3578999985 6666665555555443 478899999
Q ss_pred cccCCC----------CCCCeeEEEecccc
Q 036563 161 AEALCF----------EDSTMDGYTIAFGI 180 (288)
Q Consensus 161 ~~~~~~----------~~~~~D~v~~~~~l 180 (288)
+.+... .-+..|+++.+...
T Consensus 88 v~d~~~v~~~~~~~~~~~g~iD~lvnnAg~ 117 (280)
T 4da9_A 88 LADLSSHQATVDAVVAEFGRIDCLVNNAGI 117 (280)
T ss_dssp TTSGGGHHHHHHHHHHHHSCCCEEEEECC-
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 876420 01368998877654
No 431
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=76.22 E-value=29 Score=28.59 Aligned_cols=107 Identities=16% Similarity=0.146 Sum_probs=63.7
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeC-ChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDI-NPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~-s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++++|=.|++ |.++..+++.+.. .+.+++.++. +....+...+.+...+ .++.++.+|+
T Consensus 17 ~~k~~lVTGas-~gIG~aia~~l~~---------------~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv 77 (270)
T 3is3_A 17 DGKVALVTGSG-RGIGAAVAVHLGR---------------LGAKVVVNYANSTKDAEKVVSEIKALG---SDAIAIKADI 77 (270)
T ss_dssp TTCEEEESCTT-SHHHHHHHHHHHH---------------TTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCT
T ss_pred CCCEEEEECCC-chHHHHHHHHHHH---------------CCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCC
Confidence 35567766665 4555555555421 3578888775 4445555555554443 4688899998
Q ss_pred ccCC-----C-----CCCCeeEEEecccccccc-----C---H-----------HHHHHHHHhhccCCcEEEEEec
Q 036563 162 EALC-----F-----EDSTMDGYTIAFGIRNVT-----H---I-----------EKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 162 ~~~~-----~-----~~~~~D~v~~~~~l~~~~-----~---~-----------~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+.. + .-+..|+++.+....... + . ..+.+.+.+.++++|.++.+.-
T Consensus 78 ~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 78 RQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp TSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 7642 0 013589988766543221 1 1 2246677788888898887544
No 432
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=76.19 E-value=10 Score=35.02 Aligned_cols=90 Identities=18% Similarity=0.135 Sum_probs=54.6
Q ss_pred CCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEc
Q 036563 81 PFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEG 159 (288)
Q Consensus 81 ~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~ 159 (288)
..++.+|+=+|+|. |......++.. +.+|+++|.++...+.+++. + ... .
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~------------------Ga~Viv~d~~~~~~~~A~~~----G-----a~~--~ 321 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ------------------GARVSVTEIDPINALQAMME----G-----FDV--V 321 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT------------------TCEEEEECSCHHHHHHHHHT----T-----CEE--C
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC------------------CCEEEEEeCCHHHHHHHHHc----C-----CEE--e
Confidence 35678999999865 55554555544 47999999999876655432 2 222 2
Q ss_pred ccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 160 DAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 160 d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+..+. . ...|+|+..-.-.++-+ .+..+.|++||.++.+.
T Consensus 322 ~l~e~-l--~~aDvVi~atgt~~~i~-----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 322 TVEEA-I--GDADIVVTATGNKDIIM-----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp CHHHH-G--GGCSEEEECSSSSCSBC-----HHHHHHSCTTCEEEECS
T ss_pred cHHHH-H--hCCCEEEECCCCHHHHH-----HHHHHhcCCCcEEEEeC
Confidence 22221 1 25799887543222211 24567789999987643
No 433
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=76.11 E-value=29 Score=27.97 Aligned_cols=79 Identities=11% Similarity=0.058 Sum_probs=52.4
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
++++|=.|+ +|.++..+++.+.. .+.+++.++.++...+...+.+...+ .++.++.+|+.+
T Consensus 5 ~k~vlITGa-s~gIG~~~a~~l~~---------------~G~~v~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 65 (247)
T 3lyl_A 5 EKVALVTGA-SRGIGFEVAHALAS---------------KGATVVGTATSQASAEKFENSMKEKG---FKARGLVLNISD 65 (247)
T ss_dssp TCEEEESSC-SSHHHHHHHHHHHH---------------TTCEEEEEESSHHHHHHHHHHHHHTT---CCEEEEECCTTC
T ss_pred CCEEEEECC-CChHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHHHhcC---CceEEEEecCCC
Confidence 456676665 45556666665431 35889999999988877776666554 468889999876
Q ss_pred CC----------CCCCCeeEEEeccccc
Q 036563 164 LC----------FEDSTMDGYTIAFGIR 181 (288)
Q Consensus 164 ~~----------~~~~~~D~v~~~~~l~ 181 (288)
.. ...+..|+++.+....
T Consensus 66 ~~~~~~~~~~~~~~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 66 IESIQNFFAEIKAENLAIDILVNNAGIT 93 (247)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 42 1123689988776543
No 434
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=76.02 E-value=1.8 Score=32.63 Aligned_cols=71 Identities=13% Similarity=0.125 Sum_probs=42.8
Q ss_pred ChhHHHHHHHHhhhcCCCCCceEEEEccc---ccCCCCCCCeeEEEeccccc-c-ccCHHHHHHHHHhhccCCcEEEE
Q 036563 133 NPNMLNVGKKRALERGYPDKSLLWVEGDA---EALCFEDSTMDGYTIAFGIR-N-VTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 133 s~~~~~~a~~~~~~~~~~~~~v~~~~~d~---~~~~~~~~~~D~v~~~~~l~-~-~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
.|+.++.++...... ++..+..+-.|= ....++.++||.|+....-. . ..=+..++..+.+.|+|||.|.-
T Consensus 21 ~pe~le~~k~~~~~~--~~~~~d~qmlDRLa~G~VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 21 TPELVENTKAQAASK--KVKFVDQFLINKLNDGSITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp SHHHHHHHHHHHHHT--TEEEEEEEEHHHHHHTCCCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CHHHHHHHHHhhhcc--ccchhhHHHHHHHhcCcccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 456666666655442 101222332331 11246788999998755433 2 22248899999999999999973
No 435
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=75.94 E-value=30 Score=28.56 Aligned_cols=80 Identities=15% Similarity=0.180 Sum_probs=50.8
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+.+||=.|+ +|.++..+++.+.. .+.+|++++.++..++...+.+...+.. .++.++.+|+.+
T Consensus 32 ~k~vlVTGa-sggIG~~la~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~ 94 (279)
T 1xg5_A 32 DRLALVTGA-SGGIGAAVARALVQ---------------QGLKVVGCARTVGNIEELAAECKSAGYP-GTLIPYRCDLSN 94 (279)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHHTTCS-SEEEEEECCTTC
T ss_pred CCEEEEECC-CchHHHHHHHHHHH---------------CCCEEEEEECChHHHHHHHHHHHhcCCC-ceEEEEEecCCC
Confidence 456776665 56666666666531 3578999999887776665555544332 467888888865
Q ss_pred CC-----CC-----CCCeeEEEecccc
Q 036563 164 LC-----FE-----DSTMDGYTIAFGI 180 (288)
Q Consensus 164 ~~-----~~-----~~~~D~v~~~~~l 180 (288)
.. +. -+.+|+++.+...
T Consensus 95 ~~~v~~~~~~~~~~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 95 EEDILSMFSAIRSQHSGVDICINNAGL 121 (279)
T ss_dssp HHHHHHHHHHHHHHHCCCSEEEECCCC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEECCCC
Confidence 42 00 1358998876653
No 436
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=75.76 E-value=10 Score=32.45 Aligned_cols=54 Identities=13% Similarity=0.046 Sum_probs=35.4
Q ss_pred EcccccCCCCCCCeeEEEeccccc----c-c--cCH----HHHHHHHHhhccCCcEEEEEeccCCC
Q 036563 158 EGDAEALCFEDSTMDGYTIAFGIR----N-V--THI----EKALAEAYRVLKRGGRFLCLELSHVD 212 (288)
Q Consensus 158 ~~d~~~~~~~~~~~D~v~~~~~l~----~-~--~~~----~~~l~~~~~~L~pgG~l~i~~~~~~~ 212 (288)
.+|+.... ..+++|+|+++..-. + . .|- .-++..+..+|+|||.+++--+...+
T Consensus 195 ~lDfg~p~-~~~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaD 259 (320)
T 2hwk_A 195 RLDLGIPG-DVPKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYAD 259 (320)
T ss_dssp CGGGCSCT-TSCCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCS
T ss_pred ccccCCcc-ccCcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 44544322 225799999977632 2 1 111 12567788999999999998887774
No 437
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=74.79 E-value=13 Score=30.49 Aligned_cols=78 Identities=12% Similarity=0.039 Sum_probs=48.9
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeC-ChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDI-NPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~-s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
+++||=.|+ +|.++..+++.+.. .+.++++++. ++...+...+.+...+ .++.++.+|+.
T Consensus 21 ~k~vlItGa-sggiG~~la~~l~~---------------~G~~v~~~~r~~~~~~~~~~~~l~~~~---~~~~~~~~D~~ 81 (274)
T 1ja9_A 21 GKVALTTGA-GRGIGRGIAIELGR---------------RGASVVVNYGSSSKAAEEVVAELKKLG---AQGVAIQADIS 81 (274)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHH---------------TTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEeCC-CchHHHHHHHHHHH---------------CCCEEEEEcCCchHHHHHHHHHHHhcC---CcEEEEEecCC
Confidence 456776654 66777777776531 3478999887 6666655554444433 46888889987
Q ss_pred cCC-----CC-----CCCeeEEEecccc
Q 036563 163 ALC-----FE-----DSTMDGYTIAFGI 180 (288)
Q Consensus 163 ~~~-----~~-----~~~~D~v~~~~~l 180 (288)
+.. +. -+..|+++.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 82 KPSEVVALFDKAVSHFGGLDFVMSNSGM 109 (274)
T ss_dssp SHHHHHHHHHHHHHHHSCEEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 532 10 1268998876553
No 438
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=74.58 E-value=14 Score=27.70 Aligned_cols=96 Identities=15% Similarity=-0.010 Sum_probs=50.6
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+|+=+|+| .++..+++.+.. .+.+++++|.++..++.++. . ....++.+|.
T Consensus 17 ~~~~~v~IiG~G--~iG~~la~~L~~---------------~g~~V~vid~~~~~~~~~~~---~-----~g~~~~~~d~ 71 (155)
T 2g1u_A 17 QKSKYIVIFGCG--RLGSLIANLASS---------------SGHSVVVVDKNEYAFHRLNS---E-----FSGFTVVGDA 71 (155)
T ss_dssp CCCCEEEEECCS--HHHHHHHHHHHH---------------TTCEEEEEESCGGGGGGSCT---T-----CCSEEEESCT
T ss_pred cCCCcEEEECCC--HHHHHHHHHHHh---------------CCCeEEEEECCHHHHHHHHh---c-----CCCcEEEecC
Confidence 456789999875 444444444321 24789999998875443220 1 2344565664
Q ss_pred ccCC----CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 162 EALC----FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 162 ~~~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
.+.. ..-..+|+|+....- +.....+..+.+.+.+...++.
T Consensus 72 ~~~~~l~~~~~~~ad~Vi~~~~~---~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 72 AEFETLKECGMEKADMVFAFTND---DSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp TSHHHHHTTTGGGCSEEEECSSC---HHHHHHHHHHHHHTSCCSEEEE
T ss_pred CCHHHHHHcCcccCCEEEEEeCC---cHHHHHHHHHHHHHCCCCeEEE
Confidence 3311 112358988865431 1122334444454555556654
No 439
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=73.77 E-value=43 Score=28.89 Aligned_cols=98 Identities=17% Similarity=0.169 Sum_probs=54.0
Q ss_pred hhcCCCCCCeEEEecC-C-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEE-EEeCChhH---HHHHHHHhhhcCCC
Q 036563 77 SKLNPFPGMKHLDVAG-G-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIY-VCDINPNM---LNVGKKRALERGYP 150 (288)
Q Consensus 77 ~~l~~~~~~~vLDiG~-G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~D~s~~~---~~~a~~~~~~~~~~ 150 (288)
......++.+||=+|+ | .|..+..+++..+ ++++ .++.++.. .+.++ ..+..
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G------------------a~vi~~~~~~~~~~~~~~~~~----~lGa~ 218 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAALG------------------LRTINVVRDRPDIQKLSDRLK----SLGAE 218 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHHT------------------CEEEEEECCCSCHHHHHHHHH----HTTCS
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHcC------------------CEEEEEecCccchHHHHHHHH----hcCCc
Confidence 3345678889999997 3 4888888888763 5544 45554432 23332 23321
Q ss_pred CCceEEEEc------ccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 151 DKSLLWVEG------DAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 151 ~~~v~~~~~------d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.++.. ++....-....+|+|+-.-. ... .....+.|+++|+++++.
T Consensus 219 ----~vi~~~~~~~~~~~~~~~~~~~~Dvvid~~g------~~~-~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 219 ----HVITEEELRRPEMKNFFKDMPQPRLALNCVG------GKS-STELLRQLARGGTMVTYG 270 (357)
T ss_dssp ----EEEEHHHHHSGGGGGTTSSSCCCSEEEESSC------HHH-HHHHHTTSCTTCEEEECC
T ss_pred ----EEEecCcchHHHHHHHHhCCCCceEEEECCC------cHH-HHHHHHhhCCCCEEEEEe
Confidence 22221 11111111114898873321 222 245789999999998753
No 440
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=73.75 E-value=29 Score=28.57 Aligned_cols=106 Identities=12% Similarity=0.058 Sum_probs=61.9
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChh---HHHHHHHHhhhcCCCCCceEEEEc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPN---MLNVGKKRALERGYPDKSLLWVEG 159 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~---~~~~a~~~~~~~~~~~~~v~~~~~ 159 (288)
.++++|=.|++. .++..+++.+.. .+.+++.++.+.. .++...+.+...+ .++.++.+
T Consensus 10 ~~k~vlVTGas~-GIG~aia~~la~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 70 (262)
T 3ksu_A 10 KNKVIVIAGGIK-NLGALTAKTFAL---------------ESVNLVLHYHQAKDSDTANKLKDELEDQG---AKVALYQS 70 (262)
T ss_dssp TTCEEEEETCSS-HHHHHHHHHHTT---------------SSCEEEEEESCGGGHHHHHHHHHHHHTTT---CEEEEEEC
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHH---------------CCCEEEEEecCccCHHHHHHHHHHHHhcC---CcEEEEEC
Confidence 356777777654 456666666531 3578888876433 3444444443332 47888999
Q ss_pred ccccCC-----C-----CCCCeeEEEecccccccc-----C---H-----------HHHHHHHHhhccCCcEEEEEe
Q 036563 160 DAEALC-----F-----EDSTMDGYTIAFGIRNVT-----H---I-----------EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 160 d~~~~~-----~-----~~~~~D~v~~~~~l~~~~-----~---~-----------~~~l~~~~~~L~pgG~l~i~~ 207 (288)
|+.+.. + .-+..|+++.+....... + . ..+.+.+.+.|+++|.++.+.
T Consensus 71 Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 71 DLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp CCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 987642 0 013689988776543211 1 1 124566667777788888653
No 441
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=73.63 E-value=25 Score=26.12 Aligned_cols=96 Identities=7% Similarity=-0.039 Sum_probs=56.1
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCCh-hHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINP-NMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~-~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
..+|+=+|+ |..+..+++.+.. .+.+++++|.++ +..+....... ..+.++.+|..
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~---------------~g~~V~vid~~~~~~~~~~~~~~~------~~~~~i~gd~~ 59 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQ---------------RGQNVTVISNLPEDDIKQLEQRLG------DNADVIPGDSN 59 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHH---------------TTCCEEEEECCCHHHHHHHHHHHC------TTCEEEESCTT
T ss_pred CCcEEEECC--CHHHHHHHHHHHH---------------CCCCEEEEECCChHHHHHHHHhhc------CCCeEEEcCCC
Confidence 346777775 6677777666531 247899999973 44433332221 25778889876
Q ss_pred cCC----CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 163 ALC----FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 163 ~~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
+.. ..-...|.|++...- +.....+....+.+.|...+++
T Consensus 60 ~~~~l~~a~i~~ad~vi~~~~~---d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 60 DSSVLKKAGIDRCRAILALSDN---DADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp SHHHHHHHTTTTCSEEEECSSC---HHHHHHHHHHHHHHTSSSCEEE
T ss_pred CHHHHHHcChhhCCEEEEecCC---hHHHHHHHHHHHHHCCCCEEEE
Confidence 531 112468888865421 1223345556666777777765
No 442
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=72.98 E-value=39 Score=27.96 Aligned_cols=106 Identities=16% Similarity=0.170 Sum_probs=62.9
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCC-hhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDIN-PNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s-~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++++|=.|++. .++..+++.+.. .+.++..++.+ ....+...+.+...+ .++.++.+|+
T Consensus 30 ~gk~~lVTGas~-GIG~aia~~la~---------------~G~~V~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~Dv 90 (271)
T 3v2g_A 30 AGKTAFVTGGSR-GIGAAIAKRLAL---------------EGAAVALTYVNAAERAQAVVSEIEQAG---GRAVAIRADN 90 (271)
T ss_dssp TTCEEEEETTTS-HHHHHHHHHHHH---------------TTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCT
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHH---------------CCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEECCC
Confidence 356777777654 455555555421 35788888654 344555544454433 4688889998
Q ss_pred ccCC-----C-----CCCCeeEEEecccccccc--------C-----------HHHHHHHHHhhccCCcEEEEEe
Q 036563 162 EALC-----F-----EDSTMDGYTIAFGIRNVT--------H-----------IEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 162 ~~~~-----~-----~~~~~D~v~~~~~l~~~~--------~-----------~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
.+.. + .-+..|+++.+....... + ...+++.+.+.++++|.++.+.
T Consensus 91 ~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 91 RDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 7642 0 013689988776543211 1 1234667778888889888753
No 443
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=72.33 E-value=27 Score=29.37 Aligned_cols=106 Identities=14% Similarity=0.105 Sum_probs=62.7
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCCh--hHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINP--NMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~--~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
++++|=.|++ |.++..+++.+.. .+.+++.++.+. ...+...+.....+ .++.++.+|+
T Consensus 49 ~k~vlVTGas-~GIG~aia~~la~---------------~G~~V~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv 109 (294)
T 3r3s_A 49 DRKALVTGGD-SGIGRAAAIAYAR---------------EGADVAINYLPAEEEDAQQVKALIEECG---RKAVLLPGDL 109 (294)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHH---------------TTCEEEEECCGGGHHHHHHHHHHHHHTT---CCEEECCCCT
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHH---------------CCCEEEEEeCCcchhHHHHHHHHHHHcC---CcEEEEEecC
Confidence 5577777765 5555555555421 357898888763 33444444444433 4688888888
Q ss_pred ccCC-----C-----CCCCeeEEEeccccccc-c-----C---H-----------HHHHHHHHhhccCCcEEEEEec
Q 036563 162 EALC-----F-----EDSTMDGYTIAFGIRNV-T-----H---I-----------EKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 162 ~~~~-----~-----~~~~~D~v~~~~~l~~~-~-----~---~-----------~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
.+.. + .-+..|+++.+...... . + . ..+++.+.+.++++|.++.+.-
T Consensus 110 ~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 110 SDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp TSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 6532 0 01368998877654321 1 1 1 2346677778888898887543
No 444
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=71.66 E-value=44 Score=28.02 Aligned_cols=79 Identities=14% Similarity=0.119 Sum_probs=49.0
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCC------------hhHHHHHHHHhhhcCCC
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDIN------------PNMLNVGKKRALERGYP 150 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s------------~~~~~~a~~~~~~~~~~ 150 (288)
.++++|=.|++.| ++..+++.+.. .+++++.+|.+ ++.++...+.+...+
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~---------------~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 88 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAR---------------EGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG-- 88 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHH---------------TTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHH---------------CCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC--
Confidence 4567777776654 45555554421 35899999986 555555555554443
Q ss_pred CCceEEEEcccccCC-----C-----CCCCeeEEEecccc
Q 036563 151 DKSLLWVEGDAEALC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~-----~-----~~~~~D~v~~~~~l 180 (288)
.++.++.+|+.+.. + .-+..|+++.+...
T Consensus 89 -~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~ 127 (299)
T 3t7c_A 89 -RRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAAL 127 (299)
T ss_dssp -CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred -CceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 47889999987642 0 01368998876653
No 445
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=71.18 E-value=42 Score=27.57 Aligned_cols=78 Identities=15% Similarity=0.109 Sum_probs=50.7
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh-cCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE-RGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~-~~~~~~~v~~~~~d~~ 162 (288)
++++|=.|++ |.++..+++.+.. .+.+|+.++.+++.++...+.+.. .+ .++.++.+|+.
T Consensus 20 ~k~vlVTGas-~gIG~aia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dv~ 80 (266)
T 4egf_A 20 GKRALITGAT-KGIGADIARAFAA---------------AGARLVLSGRDVSELDAARRALGEQFG---TDVHTVAIDLA 80 (266)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHHHHC---CCEEEEECCTT
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHHHHhcC---CcEEEEEecCC
Confidence 4567766655 4555555555421 358899999998887776665544 22 46889999987
Q ss_pred cCCC----------CCCCeeEEEecccc
Q 036563 163 ALCF----------EDSTMDGYTIAFGI 180 (288)
Q Consensus 163 ~~~~----------~~~~~D~v~~~~~l 180 (288)
+... .-+..|+++.+...
T Consensus 81 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 108 (266)
T 4egf_A 81 EPDAPAELARRAAEAFGGLDVLVNNAGI 108 (266)
T ss_dssp STTHHHHHHHHHHHHHTSCSEEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 6530 01368998876654
No 446
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=70.76 E-value=10 Score=32.84 Aligned_cols=98 Identities=13% Similarity=0.112 Sum_probs=54.6
Q ss_pred HhhcCCCCCCeEEEecCC--ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCc
Q 036563 76 VSKLNPFPGMKHLDVAGG--TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKS 153 (288)
Q Consensus 76 ~~~l~~~~~~~vLDiG~G--~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~ 153 (288)
.+.....++.+||=.|++ .|..+..+++..+ ..++++++ ++...+.++ .+.
T Consensus 135 ~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g-----------------~~~V~~~~-~~~~~~~~~-----~ga---- 187 (349)
T 4a27_A 135 FEVANLREGMSVLVHSAGGGVGQAVAQLCSTVP-----------------NVTVFGTA-STFKHEAIK-----DSV---- 187 (349)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHTTST-----------------TCEEEEEE-CGGGHHHHG-----GGS----
T ss_pred HHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcC-----------------CcEEEEeC-CHHHHHHHH-----cCC----
Confidence 345566788999999983 3666666666542 36888888 555544443 121
Q ss_pred eEEEEcccccC-----CCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEec
Q 036563 154 LLWVEGDAEAL-----CFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 154 v~~~~~d~~~~-----~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
..++..+ .++ ....+.+|+|+-.-. . . .+....+.|+++|++++...
T Consensus 188 ~~~~~~~-~~~~~~~~~~~~~g~Dvv~d~~g-----~-~-~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 188 THLFDRN-ADYVQEVKRISAEGVDIVLDCLC-----G-D-NTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp SEEEETT-SCHHHHHHHHCTTCEEEEEEECC--------------CTTEEEEEEEEEEC-
T ss_pred cEEEcCC-ccHHHHHHHhcCCCceEEEECCC-----c-h-hHHHHHHHhhcCCEEEEECC
Confidence 1222211 111 112346999884322 1 1 23678899999999997643
No 447
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=69.98 E-value=46 Score=27.92 Aligned_cols=81 Identities=15% Similarity=0.162 Sum_probs=50.2
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
++++|=.|+ +|.++..+++.+.. .+.+|+.++.+++.++...+.+...+....++.++.+|+.+
T Consensus 26 ~k~vlVTGa-s~gIG~aia~~L~~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d 89 (297)
T 1xhl_A 26 GKSVIITGS-SNGIGRSAAVIFAK---------------EGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE 89 (297)
T ss_dssp TCEEEETTC-SSHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC
Confidence 456666665 55666666666531 35789999999887766655554432110168888899865
Q ss_pred CC-----CC-----CCCeeEEEecccc
Q 036563 164 LC-----FE-----DSTMDGYTIAFGI 180 (288)
Q Consensus 164 ~~-----~~-----~~~~D~v~~~~~l 180 (288)
.. +. -+..|+++.+...
T Consensus 90 ~~~v~~~~~~~~~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 90 ASGQDDIINTTLAKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 42 00 1368998876653
No 448
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=69.89 E-value=46 Score=27.50 Aligned_cols=80 Identities=16% Similarity=0.160 Sum_probs=49.7
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeC-------------ChhHHHHHHHHhhhcCC
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDI-------------NPNMLNVGKKRALERGY 149 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~-------------s~~~~~~a~~~~~~~~~ 149 (288)
.++++|=.|++. .++..+++.+.. .+.+++.+|. ++..++...+.....+
T Consensus 14 ~gk~~lVTGas~-gIG~a~a~~la~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 76 (280)
T 3pgx_A 14 QGRVAFITGAAR-GQGRSHAVRLAA---------------EGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQG- 76 (280)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHH---------------TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT-
T ss_pred CCCEEEEECCCc-HHHHHHHHHHHH---------------CCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-
Confidence 456677777655 445555555421 3589999987 5666666655555443
Q ss_pred CCCceEEEEcccccCC-----C-----CCCCeeEEEeccccc
Q 036563 150 PDKSLLWVEGDAEALC-----F-----EDSTMDGYTIAFGIR 181 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~-----~-----~~~~~D~v~~~~~l~ 181 (288)
.++.++.+|+.+.. + .-+..|+++.+....
T Consensus 77 --~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 116 (280)
T 3pgx_A 77 --RKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVL 116 (280)
T ss_dssp --CCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred --CeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 46888889987542 0 013689988776543
No 449
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=69.76 E-value=45 Score=27.35 Aligned_cols=80 Identities=15% Similarity=0.047 Sum_probs=50.4
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
++++|=.|++ |.++..+++.+.. .+.+|+.+|.++..++...+.+...... ..+.++.+|+.+
T Consensus 10 ~k~~lVTGas-~gIG~aia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~D~~~ 72 (267)
T 3t4x_A 10 GKTALVTGST-AGIGKAIATSLVA---------------EGANVLINGRREENVNETIKEIRAQYPD-AILQPVVADLGT 72 (267)
T ss_dssp TCEEEETTCS-SHHHHHHHHHHHH---------------TTCEEEEEESSHHHHHHHHHHHHHHCTT-CEEEEEECCTTS
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHHHhhCCC-ceEEEEecCCCC
Confidence 4567766654 5555666655421 3589999999988777666665544222 467788888765
Q ss_pred CC------CCCCCeeEEEecccc
Q 036563 164 LC------FEDSTMDGYTIAFGI 180 (288)
Q Consensus 164 ~~------~~~~~~D~v~~~~~l 180 (288)
.. ..-+..|+++.+...
T Consensus 73 ~~~~~~~~~~~g~id~lv~nAg~ 95 (267)
T 3t4x_A 73 EQGCQDVIEKYPKVDILINNLGI 95 (267)
T ss_dssp HHHHHHHHHHCCCCSEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 31 011368998876654
No 450
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=69.38 E-value=35 Score=28.20 Aligned_cols=105 Identities=16% Similarity=0.144 Sum_probs=61.1
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEe-CChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCD-INPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D-~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++++|=.|++. .++..+++.+.. .+.+++.++ .++...+...+.+...+ .++.++.+|+.
T Consensus 27 ~k~~lVTGas~-GIG~aia~~la~---------------~G~~Vv~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dl~ 87 (267)
T 3u5t_A 27 NKVAIVTGASR-GIGAAIAARLAS---------------DGFTVVINYAGKAAAAEEVAGKIEAAG---GKALTAQADVS 87 (267)
T ss_dssp CCEEEEESCSS-HHHHHHHHHHHH---------------HTCEEEEEESSCSHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHH---------------CCCEEEEEcCCCHHHHHHHHHHHHhcC---CeEEEEEcCCC
Confidence 55677777655 445555554421 247777764 45555555555554443 46888889987
Q ss_pred cCC-----C-----CCCCeeEEEecccccccc-----C---H-----------HHHHHHHHhhccCCcEEEEEe
Q 036563 163 ALC-----F-----EDSTMDGYTIAFGIRNVT-----H---I-----------EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 163 ~~~-----~-----~~~~~D~v~~~~~l~~~~-----~---~-----------~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+.. + .-+..|+++.+..+.... + . ..+++.+.+.++++|.++.+.
T Consensus 88 ~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 88 DPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp CHHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 642 0 013689988776543221 1 1 124567777788888888654
No 451
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=69.11 E-value=29 Score=28.66 Aligned_cols=65 Identities=12% Similarity=-0.038 Sum_probs=39.1
Q ss_pred ceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEE
Q 036563 125 TRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 125 ~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
.+++++|.+++.++.+.+ .+.. .. ...|.... ...|+|+..-... ....+++++...++++..++
T Consensus 24 ~~V~~~~~~~~~~~~~~~----~g~~---~~-~~~~~~~~----~~~D~vi~av~~~---~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 24 HYLIGVSRQQSTCEKAVE----RQLV---DE-AGQDLSLL----QTAKIIFLCTPIQ---LILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp CEEEEECSCHHHHHHHHH----TTSC---SE-EESCGGGG----TTCSEEEECSCHH---HHHHHHHHHGGGSCTTCEEE
T ss_pred CEEEEEECCHHHHHHHHh----CCCC---cc-ccCCHHHh----CCCCEEEEECCHH---HHHHHHHHHHhhCCCCCEEE
Confidence 589999999887665532 2221 11 12333322 3589988755422 34567778888888877554
No 452
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=68.92 E-value=44 Score=28.46 Aligned_cols=96 Identities=17% Similarity=0.124 Sum_probs=53.7
Q ss_pred CCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEE-----E
Q 036563 84 GMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLW-----V 157 (288)
Q Consensus 84 ~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~-----~ 157 (288)
.++|.=||+|. |......+... +.+|+.+ .+++.++..++.-..... +...+ .
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~------------------G~~V~l~-~~~~~~~~i~~~g~~~~~--~~~~~~~~~~~ 77 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARA------------------GHEVILI-ARPQHVQAIEATGLRLET--QSFDEQVKVSA 77 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHT------------------TCEEEEE-CCHHHHHHHHHHCEEEEC--SSCEEEECCEE
T ss_pred CCcEEEECcCHHHHHHHHHHHHC------------------CCeEEEE-EcHhHHHHHHhCCeEEEc--CCCcEEEeeee
Confidence 46899998885 43333333322 3688888 888777666543110000 11111 0
Q ss_pred EcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEEe
Q 036563 158 EGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 158 ~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 207 (288)
..|... ...+|+|+..---. +...+++.+...++++..++...
T Consensus 78 ~~~~~~----~~~~D~vilavk~~---~~~~~l~~l~~~l~~~~~iv~~~ 120 (318)
T 3hwr_A 78 SSDPSA----VQGADLVLFCVKST---DTQSAALAMKPALAKSALVLSLQ 120 (318)
T ss_dssp ESCGGG----GTTCSEEEECCCGG---GHHHHHHHHTTTSCTTCEEEEEC
T ss_pred eCCHHH----cCCCCEEEEEcccc---cHHHHHHHHHHhcCCCCEEEEeC
Confidence 122211 13689988754432 45778899999999888776543
No 453
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=68.90 E-value=37 Score=27.73 Aligned_cols=76 Identities=12% Similarity=0.072 Sum_probs=48.6
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
.++++|=.|++ |.++..+++.+.. .+.+|+.+|.++..++...+.. + .++.++.+|+.
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~D~~ 64 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVR---------------EGATVAIADIDIERARQAAAEI---G---PAAYAVQMDVT 64 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHH---C---TTEEEEECCTT
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHh---C---CCceEEEeeCC
Confidence 35577777754 5555566555421 3588999999887766555443 1 46788889987
Q ss_pred cCC----------CCCCCeeEEEecccc
Q 036563 163 ALC----------FEDSTMDGYTIAFGI 180 (288)
Q Consensus 163 ~~~----------~~~~~~D~v~~~~~l 180 (288)
+.. ..-+..|+++.+...
T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 65 RQDSIDAAIAATVEHAGGLDILVNNAAL 92 (259)
T ss_dssp CHHHHHHHHHHHHHHSSSCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 542 011368998887654
No 454
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=68.20 E-value=14 Score=37.32 Aligned_cols=76 Identities=11% Similarity=0.097 Sum_probs=51.8
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCC-ceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEE-TRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
+..+++|+-||.|.++.-+.+.. . ..+.++|+++.+.+.-+.+. ++..++..|+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~AG------------------~~~vv~avEid~~A~~ty~~N~-------p~~~~~~~DI 593 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQAG------------------ISDTLWAIEMWDPAAQAFRLNN-------PGSTVFTEDC 593 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHHHT------------------SEEEEEEECSSHHHHHHHHHHC-------TTSEEECSCH
T ss_pred CCCeEEEeccCccHHHHHHHHCC------------------CCceEEEEECCHHHHHHHHHhC-------CCCccccccH
Confidence 44689999999999998886652 1 35779999999887776664 3445555554
Q ss_pred ccC---------------CCC-CCCeeEEEeccccccc
Q 036563 162 EAL---------------CFE-DSTMDGYTIAFGIRNV 183 (288)
Q Consensus 162 ~~~---------------~~~-~~~~D~v~~~~~l~~~ 183 (288)
..+ .++ .+.+|+++.....+.+
T Consensus 594 ~~l~~~~~~~di~~~~~~~lp~~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 594 NILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp HHHHHHHHHTCSBCTTCCBCCCTTTCSEEEECCCCTTC
T ss_pred HHHhhhccchhhhhhhhhhcccCCCeeEEEEcCCCcch
Confidence 221 121 2468999987765544
No 455
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=67.93 E-value=21 Score=30.16 Aligned_cols=88 Identities=13% Similarity=0.033 Sum_probs=49.9
Q ss_pred CCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEE-c
Q 036563 82 FPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVE-G 159 (288)
Q Consensus 82 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~-~ 159 (288)
-++.+|+=+|+|. |......+..+ +.+++++|.++...+.+. ..+ +.... .
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~------------------G~~V~~~dr~~~~~~~~~----~~g-----~~~~~~~ 205 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAAL------------------GAKVKVGARESDLLARIA----EMG-----MEPFHIS 205 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHH----HTT-----SEEEEGG
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhC------------------CCEEEEEECCHHHHHHHH----HCC-----CeecChh
Confidence 4577899999864 44333333333 379999999886554332 122 22221 1
Q ss_pred ccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 160 DAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 160 d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
+..+. -...|+|+..-..+.+ +. +..+.++|++.++-
T Consensus 206 ~l~~~---l~~aDvVi~~~p~~~i-~~-----~~l~~mk~~~~lin 242 (293)
T 3d4o_A 206 KAAQE---LRDVDVCINTIPALVV-TA-----NVLAEMPSHTFVID 242 (293)
T ss_dssp GHHHH---TTTCSEEEECCSSCCB-CH-----HHHHHSCTTCEEEE
T ss_pred hHHHH---hcCCCEEEECCChHHh-CH-----HHHHhcCCCCEEEE
Confidence 22211 1358999876655333 22 23456899988764
No 456
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=67.41 E-value=38 Score=27.92 Aligned_cols=106 Identities=15% Similarity=0.111 Sum_probs=60.6
Q ss_pred CCeEEEecCC-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGG-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++++|=.|++ +|.++..+++.+.. .+.+|+.++.++. .+...+.+.... +++.++.+|+.
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~---------------~G~~V~~~~r~~~-~~~~~~~l~~~~---~~~~~~~~D~~ 66 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFN---------------QGATLAFTYLNES-LEKRVRPIAQEL---NSPYVYELDVS 66 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHT---------------TTCEEEEEESSTT-THHHHHHHHHHT---TCCCEEECCTT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHH---------------CCCEEEEEeCCHH-HHHHHHHHHHhc---CCcEEEEcCCC
Confidence 5678888875 36667777666531 3578999998775 222222222211 23677888876
Q ss_pred cCC-----C-----CCCCeeEEEeccccccc--------c-CH--------------HHHHHHHHhhccCCcEEEEEec
Q 036563 163 ALC-----F-----EDSTMDGYTIAFGIRNV--------T-HI--------------EKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 163 ~~~-----~-----~~~~~D~v~~~~~l~~~--------~-~~--------------~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+.. + .-+..|+++.+...... . +. ..+++.+.+.++++|.++.+..
T Consensus 67 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (275)
T 2pd4_A 67 KEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY 145 (275)
T ss_dssp CHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 531 0 11368998887654321 0 11 1234556666766788886543
No 457
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=66.15 E-value=33 Score=28.45 Aligned_cols=78 Identities=17% Similarity=0.105 Sum_probs=53.3
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
+++.+|=-|++.|. +..+++.+.. .+++|..+|.+++.++...+.+...+ .++.++.+|+.
T Consensus 6 ~gKvalVTGas~GI-G~aiA~~la~---------------~Ga~Vv~~~~~~~~~~~~~~~i~~~g---~~~~~~~~Dvt 66 (254)
T 4fn4_A 6 KNKVVIVTGAGSGI-GRAIAKKFAL---------------NDSIVVAVELLEDRLNQIVQELRGMG---KEVLGVKADVS 66 (254)
T ss_dssp TTCEEEEETTTSHH-HHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCCEEEEeCCCCHH-HHHHHHHHHH---------------cCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEccCC
Confidence 35667777766654 4444444321 35899999999999888888777665 46888999987
Q ss_pred cCC----------CCCCCeeEEEeccc
Q 036563 163 ALC----------FEDSTMDGYTIAFG 179 (288)
Q Consensus 163 ~~~----------~~~~~~D~v~~~~~ 179 (288)
+.. ..-+..|+++.+..
T Consensus 67 ~~~~v~~~~~~~~~~~G~iDiLVNNAG 93 (254)
T 4fn4_A 67 KKKDVEEFVRRTFETYSRIDVLCNNAG 93 (254)
T ss_dssp SHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence 642 01146899887664
No 458
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=65.82 E-value=11 Score=34.54 Aligned_cols=68 Identities=19% Similarity=0.180 Sum_probs=46.8
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
.++|+=+||| ..+..+++.+.. .+..++.+|.+++.++.+...+ .+..+.+|+.+
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~---------------~~~~v~vId~d~~~~~~~~~~~--------~~~~i~Gd~~~ 57 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVG---------------ENNDITIVDKDGDRLRELQDKY--------DLRVVNGHASH 57 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCS---------------TTEEEEEEESCHHHHHHHHHHS--------SCEEEESCTTC
T ss_pred cCEEEEECCC--HHHHHHHHHHHH---------------CCCCEEEEECCHHHHHHHHHhc--------CcEEEEEcCCC
Confidence 4677776665 566667776521 3578999999999887766542 57788999876
Q ss_pred CC----CCCCCeeEEEe
Q 036563 164 LC----FEDSTMDGYTI 176 (288)
Q Consensus 164 ~~----~~~~~~D~v~~ 176 (288)
.. ..-+..|++++
T Consensus 58 ~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 58 PDVLHEAGAQDADMLVA 74 (461)
T ss_dssp HHHHHHHTTTTCSEEEE
T ss_pred HHHHHhcCCCcCCEEEE
Confidence 52 12346888876
No 459
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=65.39 E-value=51 Score=27.49 Aligned_cols=101 Identities=13% Similarity=0.157 Sum_probs=51.6
Q ss_pred CeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEc---cc
Q 036563 85 MKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEG---DA 161 (288)
Q Consensus 85 ~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~---d~ 161 (288)
++|.=||+|. .+..++..+.. .+.+|+++|.+++.++..++.-...... +....... +.
T Consensus 4 m~i~iiG~G~--~G~~~a~~l~~---------------~g~~V~~~~r~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~ 65 (316)
T 2ew2_A 4 MKIAIAGAGA--MGSRLGIMLHQ---------------GGNDVTLIDQWPAHIEAIRKNGLIADFN-GEEVVANLPIFSP 65 (316)
T ss_dssp CEEEEECCSH--HHHHHHHHHHH---------------TTCEEEEECSCHHHHHHHHHHCEEEEET-TEEEEECCCEECG
T ss_pred CeEEEECcCH--HHHHHHHHHHh---------------CCCcEEEEECCHHHHHHHHhCCEEEEeC-CCeeEecceeecc
Confidence 5788898864 33333333210 2368999999988776654431000000 00000000 11
Q ss_pred ccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 162 EALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
.+....-..+|+|+..-.-. ....+++.+...++++..++.+
T Consensus 66 ~~~~~~~~~~d~vi~~v~~~---~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 66 EEIDHQNEQVDLIIALTKAQ---QLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp GGCCTTSCCCSEEEECSCHH---HHHHHHHHHGGGCCTTCEEEEC
T ss_pred hhhcccCCCCCEEEEEeccc---cHHHHHHHHHHhcCCCCEEEEe
Confidence 11110012589988755422 3466788888888887766543
No 460
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=65.26 E-value=55 Score=26.69 Aligned_cols=106 Identities=17% Similarity=0.168 Sum_probs=59.0
Q ss_pred CCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++++|=.|++. |.++..+++.+.. .+.+|+.++.++...+..++..... +...++.+|+.
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~---------------~G~~V~~~~r~~~~~~~~~~l~~~~----~~~~~~~~D~~ 69 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHR---------------EGAELAFTYQNDKLKGRVEEFAAQL----GSDIVLQCDVA 69 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHH---------------TTCEEEEEESSTTTHHHHHHHHHHT----TCCCEEECCTT
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHH---------------CCCEEEEEcCcHHHHHHHHHHHHhc----CCcEEEEccCC
Confidence 56788777752 6667777666531 3578999998762222222211111 13467778876
Q ss_pred cCC----------CCCCCeeEEEecccccc-----------cc--CH-----------HHHHHHHHhhccCCcEEEEEec
Q 036563 163 ALC----------FEDSTMDGYTIAFGIRN-----------VT--HI-----------EKALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 163 ~~~----------~~~~~~D~v~~~~~l~~-----------~~--~~-----------~~~l~~~~~~L~pgG~l~i~~~ 208 (288)
+.. ..-+..|+++.+..... .+ +. ..+++.+.+.++++|.++.+..
T Consensus 70 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 149 (265)
T 1qsg_A 70 EDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSY 149 (265)
T ss_dssp CHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcc
Confidence 531 11236899888765432 11 11 1234556666666788876543
No 461
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=64.86 E-value=30 Score=29.22 Aligned_cols=89 Identities=12% Similarity=0.046 Sum_probs=51.2
Q ss_pred CCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEE-c
Q 036563 82 FPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVE-G 159 (288)
Q Consensus 82 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~-~ 159 (288)
-++.+|+=+|+|. |......+... +.+++++|.++...+.+.+ .+ +.... .
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~------------------G~~V~~~d~~~~~~~~~~~----~g-----~~~~~~~ 207 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAAL------------------GANVKVGARSSAHLARITE----MG-----LVPFHTD 207 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHT------------------TCEEEEEESSHHHHHHHHH----TT-----CEEEEGG
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHC------------------CCEEEEEECCHHHHHHHHH----CC-----CeEEchh
Confidence 4578999999864 43333333333 4799999998865443322 11 22221 2
Q ss_pred ccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEEE
Q 036563 160 DAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLCL 206 (288)
Q Consensus 160 d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~ 206 (288)
+..+. -...|+|+.....+.+ +. ...+.++||+.++-+
T Consensus 208 ~l~~~---l~~aDvVi~~~p~~~i-~~-----~~~~~mk~g~~lin~ 245 (300)
T 2rir_A 208 ELKEH---VKDIDICINTIPSMIL-NQ-----TVLSSMTPKTLILDL 245 (300)
T ss_dssp GHHHH---STTCSEEEECCSSCCB-CH-----HHHTTSCTTCEEEEC
T ss_pred hHHHH---hhCCCEEEECCChhhh-CH-----HHHHhCCCCCEEEEE
Confidence 22221 1358999887665433 21 245678999887643
No 462
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=64.41 E-value=20 Score=29.65 Aligned_cols=104 Identities=13% Similarity=0.187 Sum_probs=62.2
Q ss_pred CCCeEEEecC-CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhH-HHHHHHHhhhcCCCCCceEEEEcc
Q 036563 83 PGMKHLDVAG-GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNM-LNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 83 ~~~~vLDiG~-G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~-~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
.++++|=.|+ |+|.++..+++.+.. .+.+|+.++.++.. ++...+ .. . .++.++.+|
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~---~~--~-~~~~~~~~D 64 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQE---------------QGAQLVLTGFDRLRLIQRITD---RL--P-AKAPLLELD 64 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH---------------TTCEEEEEECSCHHHHHHHHT---TS--S-SCCCEEECC
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHH---------------CCCEEEEEecChHHHHHHHHH---hc--C-CCceEEEcc
Confidence 3567888887 477777777776532 35789999987643 232222 11 1 357788888
Q ss_pred cccCC------------CC-CCCeeEEEecccccc--------cc--CH--------------HHHHHHHHhhccCCcEE
Q 036563 161 AEALC------------FE-DSTMDGYTIAFGIRN--------VT--HI--------------EKALAEAYRVLKRGGRF 203 (288)
Q Consensus 161 ~~~~~------------~~-~~~~D~v~~~~~l~~--------~~--~~--------------~~~l~~~~~~L~pgG~l 203 (288)
+.+.. +. .+..|+++.+..... +. +. ..+.+.+.+.++++|.+
T Consensus 65 v~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~i 144 (269)
T 2h7i_A 65 VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSI 144 (269)
T ss_dssp TTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeE
Confidence 86532 10 016999987765432 11 11 12355666777777888
Q ss_pred EEEe
Q 036563 204 LCLE 207 (288)
Q Consensus 204 ~i~~ 207 (288)
+.+.
T Consensus 145 v~is 148 (269)
T 2h7i_A 145 VGMD 148 (269)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 8654
No 463
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=64.19 E-value=49 Score=27.23 Aligned_cols=80 Identities=15% Similarity=0.119 Sum_probs=49.6
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCC------------hhHHHHHHHHhhhcCCC
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDIN------------PNMLNVGKKRALERGYP 150 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s------------~~~~~~a~~~~~~~~~~ 150 (288)
.++++|=.|++ |.++..+++.+.. .+.+++.+|.+ ++.++...+.....+
T Consensus 12 ~gk~vlVTGas-~gIG~~ia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 73 (278)
T 3sx2_A 12 TGKVAFITGAA-RGQGRAHAVRLAA---------------DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG-- 73 (278)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHH---------------TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH---------------CCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--
Confidence 35567777754 4555555555421 35889999976 555555555444443
Q ss_pred CCceEEEEcccccCC-----C-----CCCCeeEEEeccccc
Q 036563 151 DKSLLWVEGDAEALC-----F-----EDSTMDGYTIAFGIR 181 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~-----~-----~~~~~D~v~~~~~l~ 181 (288)
.++.++.+|+.+.. + .-+..|+++.+..+.
T Consensus 74 -~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 74 -SRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp -CCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_pred -CeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 47889999987642 0 013689998876654
No 464
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=64.10 E-value=58 Score=26.90 Aligned_cols=79 Identities=15% Similarity=0.078 Sum_probs=46.4
Q ss_pred CCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 83 PGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 83 ~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++++|=.|+++ |.++..+++.+.. .+.+|+.++.++...+..++..... +++.++.+|+
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~---------------~G~~V~~~~r~~~~~~~~~~l~~~~----~~~~~~~~Dl 80 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHR---------------EGAQLAFTYATPKLEKRVREIAKGF----GSDLVVKCDV 80 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHH---------------TTCEEEEEESSGGGHHHHHHHHHHT----TCCCEEECCT
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHH---------------cCCEEEEEeCCHHHHHHHHHHHHhc----CCeEEEEcCC
Confidence 356788888762 6667666666531 3578999998875222222221111 2367788887
Q ss_pred ccCC-----C-----CCCCeeEEEecccc
Q 036563 162 EALC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 162 ~~~~-----~-----~~~~~D~v~~~~~l 180 (288)
.+.. + .-+..|+++.+...
T Consensus 81 ~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~ 109 (285)
T 2p91_A 81 SLDEDIKNLKKFLEENWGSLDIIVHSIAY 109 (285)
T ss_dssp TCHHHHHHHHHHHHHHTSCCCEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 6531 0 01368998887654
No 465
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=63.43 E-value=30 Score=28.56 Aligned_cols=81 Identities=10% Similarity=0.089 Sum_probs=47.9
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
++++|=.|+ +|.++..+++.+.. .+.+|+.++.++..++...+.+........++.++.+|+.+
T Consensus 6 ~k~vlVTGa-s~gIG~~ia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 69 (278)
T 1spx_A 6 EKVAIITGS-SNGIGRATAVLFAR---------------EGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT 69 (278)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS
T ss_pred CCEEEEeCC-CchHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC
Confidence 455666665 45666666665421 35789999998877766555442111111367888898865
Q ss_pred CC-----CC-----CCCeeEEEecccc
Q 036563 164 LC-----FE-----DSTMDGYTIAFGI 180 (288)
Q Consensus 164 ~~-----~~-----~~~~D~v~~~~~l 180 (288)
.. +. -+..|+++.+...
T Consensus 70 ~~~~~~~~~~~~~~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 70 DAGQDEILSTTLGKFGKLDILVNNAGA 96 (278)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC-
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 31 00 1268998876653
No 466
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=62.32 E-value=41 Score=27.46 Aligned_cols=79 Identities=11% Similarity=0.060 Sum_probs=53.2
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
.+.+||=.|++ |.++..+++.+.. .+.+|+.++.+++.++...+.+...+ .++.++.+|+.
T Consensus 28 ~~k~vlITGas-~gIG~~la~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 88 (262)
T 3rkr_A 28 SGQVAVVTGAS-RGIGAAIARKLGS---------------LGARVVLTARDVEKLRAVEREIVAAG---GEAESHACDLS 88 (262)
T ss_dssp TTCEEEESSTT-SHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTT
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHH---------------CCCEEEEEECCHHHHHHHHHHHHHhC---CceeEEEecCC
Confidence 45677777654 5566666665431 35789999999988877777665543 47888999987
Q ss_pred cCC-----C-----CCCCeeEEEecccc
Q 036563 163 ALC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 163 ~~~-----~-----~~~~~D~v~~~~~l 180 (288)
+.. + .-+..|+++.+...
T Consensus 89 ~~~~v~~~~~~~~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 89 HSDAIAAFATGVLAAHGRCDVLVNNAGV 116 (262)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 642 0 01358998877654
No 467
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=62.26 E-value=65 Score=26.48 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=48.9
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeC-------------ChhHHHHHHHHhhhcCC
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDI-------------NPNMLNVGKKRALERGY 149 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~-------------s~~~~~~a~~~~~~~~~ 149 (288)
.++++|=.|++. .++..+++.+.. .+.+++.+|. ++..++...+.....+
T Consensus 10 ~~k~~lVTGas~-GIG~a~a~~la~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 72 (277)
T 3tsc_A 10 EGRVAFITGAAR-GQGRAHAVRMAA---------------EGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAAN- 72 (277)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHH---------------TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTT-
T ss_pred CCCEEEEECCcc-HHHHHHHHHHHH---------------cCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcC-
Confidence 355677777655 445555554421 3589999987 5555555555554433
Q ss_pred CCCceEEEEcccccCC-----CC-----CCCeeEEEeccccc
Q 036563 150 PDKSLLWVEGDAEALC-----FE-----DSTMDGYTIAFGIR 181 (288)
Q Consensus 150 ~~~~v~~~~~d~~~~~-----~~-----~~~~D~v~~~~~l~ 181 (288)
.++.++.+|+.+.. +. -+..|+++.+..+.
T Consensus 73 --~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 73 --RRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp --CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred --CeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 46888889987642 00 13689988776543
No 468
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=62.21 E-value=63 Score=26.76 Aligned_cols=76 Identities=12% Similarity=0.173 Sum_probs=48.1
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
++++|=.|++ |.++..+++.+.. .+.+|+.+|.+++.++...+.. + .++.++.+|+.+
T Consensus 29 gk~vlVTGas-~gIG~aia~~la~---------------~G~~V~~~~r~~~~~~~~~~~~---~---~~~~~~~~Dv~d 86 (277)
T 3gvc_A 29 GKVAIVTGAG-AGIGLAVARRLAD---------------EGCHVLCADIDGDAADAAATKI---G---CGAAACRVDVSD 86 (277)
T ss_dssp TCEEEETTTT-STHHHHHHHHHHH---------------TTCEEEEEESSHHHHHHHHHHH---C---SSCEEEECCTTC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHc---C---CcceEEEecCCC
Confidence 4567766655 4455555555421 3589999999987776655544 2 467888899876
Q ss_pred CC-----C-----CCCCeeEEEeccccc
Q 036563 164 LC-----F-----EDSTMDGYTIAFGIR 181 (288)
Q Consensus 164 ~~-----~-----~~~~~D~v~~~~~l~ 181 (288)
.. + .-+..|+++.+....
T Consensus 87 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~ 114 (277)
T 3gvc_A 87 EQQIIAMVDACVAAFGGVDKLVANAGVV 114 (277)
T ss_dssp HHHHHHHHHHHHHHHSSCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 42 0 013689988776543
No 469
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=62.14 E-value=18 Score=31.39 Aligned_cols=97 Identities=15% Similarity=0.222 Sum_probs=58.5
Q ss_pred cCCCCCCeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEE
Q 036563 79 LNPFPGMKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWV 157 (288)
Q Consensus 79 l~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~ 157 (288)
....++.+||=+|+|. |..+..+++.. .+++++++|.+++.++.+++. +. -.++
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~-----------------~Ga~Vi~~~~~~~~~~~~~~l----Ga----~~vi 236 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVM-----------------TPATVIALDVKEEKLKLAERL----GA----DHVV 236 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHH-----------------CCCEEEEEESSHHHHHHHHHT----TC----SEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-----------------CCCeEEEEeCCHHHHHHHHHh----CC----CEEE
Confidence 5567788999999864 66666677665 137899999999888877642 21 1222
Q ss_pred Ecccc---cC-CCC-CCCeeEEEeccccccccCHHH--HHHHHHhhccCCcEEEEEec
Q 036563 158 EGDAE---AL-CFE-DSTMDGYTIAFGIRNVTHIEK--ALAEAYRVLKRGGRFLCLEL 208 (288)
Q Consensus 158 ~~d~~---~~-~~~-~~~~D~v~~~~~l~~~~~~~~--~l~~~~~~L~pgG~l~i~~~ 208 (288)
...-. .. ... ...+|+|+-.-. . .. .+....+. ++|+++++..
T Consensus 237 ~~~~~~~~~v~~~~~g~g~Dvvid~~G-----~-~~~~~~~~~~~~--~~G~~v~~g~ 286 (359)
T 1h2b_A 237 DARRDPVKQVMELTRGRGVNVAMDFVG-----S-QATVDYTPYLLG--RMGRLIIVGY 286 (359)
T ss_dssp ETTSCHHHHHHHHTTTCCEEEEEESSC-----C-HHHHHHGGGGEE--EEEEEEECCC
T ss_pred eccchHHHHHHHHhCCCCCcEEEECCC-----C-chHHHHHHHhhc--CCCEEEEEeC
Confidence 21111 00 111 226999974322 2 22 45556666 8999887543
No 470
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=61.69 E-value=70 Score=26.67 Aligned_cols=83 Identities=10% Similarity=-0.076 Sum_probs=50.7
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
++++|=.|++. .++..+++.+...+- ....++.++.+.+.++...+.+...... .++.++.+|+.+
T Consensus 33 ~k~~lVTGas~-GIG~aia~~l~~~G~------------~~~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~Dv~d 98 (287)
T 3rku_A 33 KKTVLITGASA-GIGKATALEYLEASN------------GDMKLILAARRLEKLEELKKTIDQEFPN-AKVHVAQLDITQ 98 (287)
T ss_dssp TCEEEEESTTS-HHHHHHHHHHHHHHT------------TCSEEEEEESCHHHHHHHHHHHHHHCTT-CEEEEEECCTTC
T ss_pred CCEEEEecCCC-hHHHHHHHHHHHcCC------------CCceEEEEECCHHHHHHHHHHHHhhCCC-CeEEEEECCCCC
Confidence 56788777655 445555544321000 1238999999988887776665543211 468889999876
Q ss_pred CC--------C--CCCCeeEEEecccc
Q 036563 164 LC--------F--EDSTMDGYTIAFGI 180 (288)
Q Consensus 164 ~~--------~--~~~~~D~v~~~~~l 180 (288)
.. . .-+..|+++.+...
T Consensus 99 ~~~v~~~~~~~~~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 99 AEKIKPFIENLPQEFKDIDILVNNAGK 125 (287)
T ss_dssp GGGHHHHHHTSCGGGCSCCEEEECCCC
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCc
Confidence 42 1 11368999887654
No 471
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=61.53 E-value=36 Score=27.85 Aligned_cols=78 Identities=15% Similarity=0.103 Sum_probs=46.0
Q ss_pred CCeEEEecCC-ccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGG-TGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G-~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++++|=.|++ +|.++..+++.+.. .+.+|+.++.++...+..++..... ..+.++.+|+.
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~---------------~G~~V~~~~r~~~~~~~~~~l~~~~----~~~~~~~~D~~ 68 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKE---------------AGAEVALSYQAERLRPEAEKLAEAL----GGALLFRADVT 68 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHH---------------HTCEEEEEESCGGGHHHHHHHHHHT----TCCEEEECCTT
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHH---------------CCCEEEEEcCCHHHHHHHHHHHHhc----CCcEEEECCCC
Confidence 5678888875 36666666665531 2478999998875222222222221 23678888887
Q ss_pred cCC-----CC-----CCCeeEEEecccc
Q 036563 163 ALC-----FE-----DSTMDGYTIAFGI 180 (288)
Q Consensus 163 ~~~-----~~-----~~~~D~v~~~~~l 180 (288)
+.. +. -+..|+++.+...
T Consensus 69 ~~~~v~~~~~~~~~~~g~iD~lv~~Ag~ 96 (261)
T 2wyu_A 69 QDEELDALFAGVKEAFGGLDYLVHAIAF 96 (261)
T ss_dssp CHHHHHHHHHHHHHHHSSEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 542 00 1368998887654
No 472
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=61.01 E-value=44 Score=26.95 Aligned_cols=78 Identities=18% Similarity=0.171 Sum_probs=52.3
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
+.++|=.|++ |.++..+++.+.. .+.+++.+|.+++.++...+.+...+ .++.++.+|+.+
T Consensus 9 ~k~vlITGas-~giG~~~a~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~ 69 (253)
T 3qiv_A 9 NKVGIVTGSG-GGIGQAYAEALAR---------------EGAAVVVADINAEAAEAVAKQIVADG---GTAISVAVDVSD 69 (253)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHHTT---CEEEEEECCTTS
T ss_pred CCEEEEECCC-ChHHHHHHHHHHH---------------CCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEEEccCCC
Confidence 5567777764 5555566555421 35789999999988877776665543 578889999876
Q ss_pred CC-----C-----CCCCeeEEEecccc
Q 036563 164 LC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 164 ~~-----~-----~~~~~D~v~~~~~l 180 (288)
.. + .-+..|+++.+..+
T Consensus 70 ~~~~~~~~~~~~~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 70 PESAKAMADRTLAEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 42 0 01368999887654
No 473
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=60.63 E-value=70 Score=26.36 Aligned_cols=105 Identities=16% Similarity=0.165 Sum_probs=60.6
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhH-HHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNM-LNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~-~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++++|=.|+ +|.++..+++.+.. .+.+|++++.++.. .+...+.+...+ .++.++.+|+.
T Consensus 29 ~k~vlVTGa-s~gIG~~ia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~D~~ 89 (283)
T 1g0o_A 29 GKVALVTGA-GRGIGREMAMELGR---------------RGCKVIVNYANSTESAEEVVAAIKKNG---SDAACVKANVG 89 (283)
T ss_dssp TCEEEETTT-TSHHHHHHHHHHHH---------------TTCEEEEEESSCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCEEEEeCC-CcHHHHHHHHHHHH---------------CCCEEEEEeCCchHHHHHHHHHHHHhC---CCeEEEEcCCC
Confidence 456666665 55666666666531 35789998877543 333333333332 46888888876
Q ss_pred cCC-----CC-----CCCeeEEEecccccccc-----C---H-----------HHHHHHHHhhccCCcEEEEEe
Q 036563 163 ALC-----FE-----DSTMDGYTIAFGIRNVT-----H---I-----------EKALAEAYRVLKRGGRFLCLE 207 (288)
Q Consensus 163 ~~~-----~~-----~~~~D~v~~~~~l~~~~-----~---~-----------~~~l~~~~~~L~pgG~l~i~~ 207 (288)
+.. +. -+..|+++.+....... + . ..+++.+.+.|+.+|.++.+.
T Consensus 90 ~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 90 VVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 531 00 13589988776543221 1 1 123566677777778888654
No 474
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=60.49 E-value=64 Score=25.86 Aligned_cols=77 Identities=12% Similarity=0.069 Sum_probs=49.0
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
.++.+||=.|++ |.++..+++.+.. .+.+++.++.++..++...+... .++.+..+|+
T Consensus 12 ~~~k~vlVTGas-~gIG~~~a~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~------~~~~~~~~D~ 69 (249)
T 3f9i_A 12 LTGKTSLITGAS-SGIGSAIARLLHK---------------LGSKVIISGSNEEKLKSLGNALK------DNYTIEVCNL 69 (249)
T ss_dssp CTTCEEEETTTT-SHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHC------SSEEEEECCT
T ss_pred CCCCEEEEECCC-ChHHHHHHHHHHH---------------CCCEEEEEcCCHHHHHHHHHHhc------cCccEEEcCC
Confidence 456678877665 5555566555421 35889999998887766655442 3678888887
Q ss_pred ccCC------CCCCCeeEEEecccc
Q 036563 162 EALC------FEDSTMDGYTIAFGI 180 (288)
Q Consensus 162 ~~~~------~~~~~~D~v~~~~~l 180 (288)
.+.. ...+..|+++.+...
T Consensus 70 ~~~~~~~~~~~~~~~id~li~~Ag~ 94 (249)
T 3f9i_A 70 ANKEECSNLISKTSNLDILVCNAGI 94 (249)
T ss_dssp TSHHHHHHHHHTCSCCSEEEECCC-
T ss_pred CCHHHHHHHHHhcCCCCEEEECCCC
Confidence 6531 112468998877654
No 475
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=59.73 E-value=20 Score=31.46 Aligned_cols=91 Identities=12% Similarity=0.128 Sum_probs=51.7
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
.++|.=||+|. .+..++..+.. .+.+|+++|.+++.++...+. + +.. ..+..+
T Consensus 22 ~mkIgiIGlG~--mG~~~A~~L~~---------------~G~~V~v~dr~~~~~~~l~~~----g-----~~~-~~s~~e 74 (358)
T 4e21_A 22 SMQIGMIGLGR--MGADMVRRLRK---------------GGHECVVYDLNVNAVQALERE----G-----IAG-ARSIEE 74 (358)
T ss_dssp CCEEEEECCSH--HHHHHHHHHHH---------------TTCEEEEECSCHHHHHHHHTT----T-----CBC-CSSHHH
T ss_pred CCEEEEECchH--HHHHHHHHHHh---------------CCCEEEEEeCCHHHHHHHHHC----C-----CEE-eCCHHH
Confidence 46888888764 44333333211 247899999998876655432 1 111 112222
Q ss_pred CCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEE
Q 036563 164 LCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 164 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
........|+|++.-.-. ....++..+...|++|..++
T Consensus 75 ~~~~a~~~DvVi~~vp~~---~v~~vl~~l~~~l~~g~iiI 112 (358)
T 4e21_A 75 FCAKLVKPRVVWLMVPAA---VVDSMLQRMTPLLAANDIVI 112 (358)
T ss_dssp HHHHSCSSCEEEECSCGG---GHHHHHHHHGGGCCTTCEEE
T ss_pred HHhcCCCCCEEEEeCCHH---HHHHHHHHHHhhCCCCCEEE
Confidence 111112358888654432 46677888888888877665
No 476
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=59.37 E-value=52 Score=27.15 Aligned_cols=66 Identities=15% Similarity=0.152 Sum_probs=38.4
Q ss_pred eEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccccCCCCCC-CeeEEEeccccccccCHHHHHHHHHhhccCCcEEE
Q 036563 126 RIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEALCFEDS-TMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 126 ~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
+++++|.+++.++.+++ .+.. .. ...|.... -. ..|+|+..-... ....++.++...++++..++
T Consensus 28 ~V~~~d~~~~~~~~~~~----~g~~---~~-~~~~~~~~---~~~~aDvVilavp~~---~~~~v~~~l~~~l~~~~iv~ 93 (281)
T 2g5c_A 28 KIYGYDINPESISKAVD----LGII---DE-GTTSIAKV---EDFSPDFVMLSSPVR---TFREIAKKLSYILSEDATVT 93 (281)
T ss_dssp EEEEECSCHHHHHHHHH----TTSC---SE-EESCGGGG---GGTCCSEEEECSCHH---HHHHHHHHHHHHSCTTCEEE
T ss_pred EEEEEeCCHHHHHHHHH----CCCc---cc-ccCCHHHH---hcCCCCEEEEcCCHH---HHHHHHHHHHhhCCCCcEEE
Confidence 79999999887765542 2221 11 12233221 12 579988654332 23467777888888887555
Q ss_pred E
Q 036563 205 C 205 (288)
Q Consensus 205 i 205 (288)
.
T Consensus 94 ~ 94 (281)
T 2g5c_A 94 D 94 (281)
T ss_dssp E
T ss_pred E
Confidence 3
No 477
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=59.27 E-value=41 Score=28.68 Aligned_cols=89 Identities=11% Similarity=0.029 Sum_probs=54.2
Q ss_pred CeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCCh----hHHHHHHHHhhhcCCCCCceEEEEcc
Q 036563 85 MKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINP----NMLNVGKKRALERGYPDKSLLWVEGD 160 (288)
Q Consensus 85 ~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~----~~~~~a~~~~~~~~~~~~~v~~~~~d 160 (288)
++||=.|+ +|.++..+++.+.. .+.++++++.++ ...+.... +.. .++.++.+|
T Consensus 11 ~~IlVtGa-tG~iG~~l~~~L~~---------------~g~~V~~l~R~~~~~~~~~~~~~~-l~~-----~~v~~~~~D 68 (346)
T 3i6i_A 11 GRVLIAGA-TGFIGQFVATASLD---------------AHRPTYILARPGPRSPSKAKIFKA-LED-----KGAIIVYGL 68 (346)
T ss_dssp CCEEEECT-TSHHHHHHHHHHHH---------------TTCCEEEEECSSCCCHHHHHHHHH-HHH-----TTCEEEECC
T ss_pred CeEEEECC-CcHHHHHHHHHHHH---------------CCCCEEEEECCCCCChhHHHHHHH-HHh-----CCcEEEEee
Confidence 47887765 77888877776531 236888888765 22222211 222 468899999
Q ss_pred cccCC-----CCCCCeeEEEeccccccccCHHHHHHHHHh
Q 036563 161 AEALC-----FEDSTMDGYTIAFGIRNVTHIEKALAEAYR 195 (288)
Q Consensus 161 ~~~~~-----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~ 195 (288)
+.+.. +....+|.|+......++.....+++.+.+
T Consensus 69 l~d~~~l~~~~~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~ 108 (346)
T 3i6i_A 69 INEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKA 108 (346)
T ss_dssp TTCHHHHHHHHHHTTCCEEEECCCGGGGGGHHHHHHHHHH
T ss_pred cCCHHHHHHHHhhCCCCEEEECCchhhHHHHHHHHHHHHH
Confidence 86532 222258999887766555555555555544
No 478
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=59.13 E-value=72 Score=25.98 Aligned_cols=78 Identities=10% Similarity=0.009 Sum_probs=48.7
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEE-eCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVC-DINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++++|=.|+ +|.++..+++.+.. .+.+++.+ +.++...+...+.+...+ .++.++.+|+.
T Consensus 4 ~k~vlVTGa-s~gIG~aia~~l~~---------------~G~~vv~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 64 (258)
T 3oid_A 4 NKCALVTGS-SRGVGKAAAIRLAE---------------NGYNIVINYARSKKAALETAEEIEKLG---VKVLVVKANVG 64 (258)
T ss_dssp CCEEEESSC-SSHHHHHHHHHHHH---------------TTCEEEEEESSCHHHHHHHHHHHHTTT---CCEEEEECCTT
T ss_pred CCEEEEecC-CchHHHHHHHHHHH---------------CCCEEEEEcCCCHHHHHHHHHHHHhcC---CcEEEEEcCCC
Confidence 456666665 45556666665431 34788776 778777766666655443 46888999987
Q ss_pred cCC-----C-----CCCCeeEEEecccc
Q 036563 163 ALC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 163 ~~~-----~-----~~~~~D~v~~~~~l 180 (288)
+.. + .-+..|+++.+...
T Consensus 65 ~~~~v~~~~~~~~~~~g~id~lv~nAg~ 92 (258)
T 3oid_A 65 QPAKIKEMFQQIDETFGRLDVFVNNAAS 92 (258)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 642 0 01357998877653
No 479
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=58.63 E-value=29 Score=30.64 Aligned_cols=103 Identities=17% Similarity=0.217 Sum_probs=60.5
Q ss_pred HHhhcCCCCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCce
Q 036563 75 LVSKLNPFPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSL 154 (288)
Q Consensus 75 ~~~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v 154 (288)
+++.+... +.+||.++.+-|..+..+.. ..+++.+.-+...... +...++. .
T Consensus 38 l~~~~~~~-~~~~l~~n~~~g~~~~~~~~--------------------~~~~~~~~~~~~~~~~----l~~~~~~---~ 89 (381)
T 3dmg_A 38 LQKTVEPF-GERALDLNPGVGWGSLPLEG--------------------RMAVERLETSRAAFRC----LTASGLQ---A 89 (381)
T ss_dssp HHTTCCCC-SSEEEESSCTTSTTTGGGBT--------------------TBEEEEEECBHHHHHH----HHHTTCC---C
T ss_pred HHHHHHHh-CCcEEEecCCCCccccccCC--------------------CCceEEEeCcHHHHHH----HHHcCCC---c
Confidence 44455443 46899999999976654432 2566666545444333 4444543 2
Q ss_pred EEEEcccccCCCCCCCeeEEEeccccc-cccCHHHHHHHHHhhccCCcEEEEEecc
Q 036563 155 LWVEGDAEALCFEDSTMDGYTIAFGIR-NVTHIEKALAEAYRVLKRGGRFLCLELS 209 (288)
Q Consensus 155 ~~~~~d~~~~~~~~~~~D~v~~~~~l~-~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 209 (288)
.. .+ ....+...||+|++...=+ ........|.++.+.|+|||.++++.-.
T Consensus 90 ~~--~~--~~~~~~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~ 141 (381)
T 3dmg_A 90 RL--AL--PWEAAAGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDK 141 (381)
T ss_dssp EE--CC--GGGSCTTCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cc--cC--CccCCcCCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEcc
Confidence 21 11 1222345799998654421 1112466788999999999999876533
No 480
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=58.50 E-value=45 Score=27.75 Aligned_cols=86 Identities=17% Similarity=0.196 Sum_probs=48.9
Q ss_pred CeEEEecC-CccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 85 MKHLDVAG-GTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 85 ~~vLDiG~-G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
++|.=||+ |. .+..++..+.. .+.+++++|.+++..+...+ .+.. . .+..+
T Consensus 12 m~I~iIG~tG~--mG~~la~~l~~---------------~g~~V~~~~r~~~~~~~~~~----~g~~-----~--~~~~~ 63 (286)
T 3c24_A 12 KTVAILGAGGK--MGARITRKIHD---------------SAHHLAAIEIAPEGRDRLQG----MGIP-----L--TDGDG 63 (286)
T ss_dssp CEEEEETTTSH--HHHHHHHHHHH---------------SSSEEEEECCSHHHHHHHHH----TTCC-----C--CCSSG
T ss_pred CEEEEECCCCH--HHHHHHHHHHh---------------CCCEEEEEECCHHHHHHHHh----cCCC-----c--CCHHH
Confidence 47888988 64 33333333210 23689999999877665543 2221 1 12211
Q ss_pred CCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEE
Q 036563 164 LCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 164 ~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
. -...|+|+..-.-.. ...+++++...++++..++
T Consensus 64 ~---~~~aDvVi~av~~~~---~~~v~~~l~~~l~~~~ivv 98 (286)
T 3c24_A 64 W---IDEADVVVLALPDNI---IEKVAEDIVPRVRPGTIVL 98 (286)
T ss_dssp G---GGTCSEEEECSCHHH---HHHHHHHHGGGSCTTCEEE
T ss_pred H---hcCCCEEEEcCCchH---HHHHHHHHHHhCCCCCEEE
Confidence 1 135799886554322 4667777877888776554
No 481
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=58.45 E-value=57 Score=26.67 Aligned_cols=78 Identities=10% Similarity=-0.010 Sum_probs=51.7
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
.++++|=.|++.| ++..+++.+.. .+.+|+.++.+++.++...+.+...+ .++.++.+|+.
T Consensus 10 ~~k~vlVTGas~g-IG~aia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 70 (264)
T 3ucx_A 10 TDKVVVISGVGPA-LGTTLARRCAE---------------QGADLVLAARTVERLEDVAKQVTDTG---RRALSVGTDIT 70 (264)
T ss_dssp TTCEEEEESCCTT-HHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHHTT---CCEEEEECCTT
T ss_pred CCcEEEEECCCcH-HHHHHHHHHHH---------------CcCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEcCCC
Confidence 3567777776554 44555554421 35889999999988877777665544 47889999987
Q ss_pred cCC----------CCCCCeeEEEeccc
Q 036563 163 ALC----------FEDSTMDGYTIAFG 179 (288)
Q Consensus 163 ~~~----------~~~~~~D~v~~~~~ 179 (288)
+.. ..-+..|+++.+..
T Consensus 71 ~~~~v~~~~~~~~~~~g~id~lv~nAg 97 (264)
T 3ucx_A 71 DDAQVAHLVDETMKAYGRVDVVINNAF 97 (264)
T ss_dssp CHHHHHHHHHHHHHHTSCCSEEEECCC
T ss_pred CHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence 642 01136899887664
No 482
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=58.39 E-value=68 Score=27.33 Aligned_cols=90 Identities=9% Similarity=0.076 Sum_probs=57.1
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
..+|+=+|+ |..+..+++.+.. .+. ++++|.+++.++ .+. .++.++.+|+.+
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~---------------~g~-v~vid~~~~~~~-~~~---------~~~~~i~gd~~~ 166 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRG---------------SEV-FVLAEDENVRKK-VLR---------SGANFVHGDPTR 166 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGG---------------SCE-EEEESCGGGHHH-HHH---------TTCEEEESCTTS
T ss_pred cCCEEEECC--cHHHHHHHHHHHh---------------CCc-EEEEeCChhhhh-HHh---------CCcEEEEeCCCC
Confidence 457877776 6788888777631 235 999999998777 443 257889999865
Q ss_pred CC----CCCCCeeEEEeccccccccCHH-HHHHHHHhhccCCcEEEE
Q 036563 164 LC----FEDSTMDGYTIAFGIRNVTHIE-KALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 164 ~~----~~~~~~D~v~~~~~l~~~~~~~-~~l~~~~~~L~pgG~l~i 205 (288)
.. ..-+..|.+++... +|.. .......+.+.|...++.
T Consensus 167 ~~~L~~a~i~~a~~vi~~~~----~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 167 VSDLEKANVRGARAVIVDLE----SDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp HHHHHHTCSTTEEEEEECCS----SHHHHHHHHHHHHTTCTTSEEEE
T ss_pred HHHHHhcChhhccEEEEcCC----ccHHHHHHHHHHHHHCCCCeEEE
Confidence 42 22346898886432 1222 233455566777777765
No 483
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=57.92 E-value=64 Score=26.69 Aligned_cols=78 Identities=9% Similarity=-0.017 Sum_probs=47.4
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCCh-hHHHHHHHHhh-hcCCCCCceEEEEccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINP-NMLNVGKKRAL-ERGYPDKSLLWVEGDA 161 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~-~~~~~a~~~~~-~~~~~~~~v~~~~~d~ 161 (288)
++++|=.|++ |.++..+++.+.. .+.+|+.++.++ ..++...+.+. ..+ .++.++.+|+
T Consensus 23 ~k~~lVTGas-~gIG~aia~~L~~---------------~G~~V~~~~r~~~~~~~~~~~~l~~~~~---~~~~~~~~Dv 83 (288)
T 2x9g_A 23 APAAVVTGAA-KRIGRAIAVKLHQ---------------TGYRVVIHYHNSAEAAVSLADELNKERS---NTAVVCQADL 83 (288)
T ss_dssp CCEEEETTCS-SHHHHHHHHHHHH---------------HTCEEEEEESSCHHHHHHHHHHHHHHST---TCEEEEECCC
T ss_pred CCEEEEeCCC-CHHHHHHHHHHHH---------------CCCeEEEEeCCchHHHHHHHHHHHhhcC---CceEEEEeec
Confidence 4567766654 5555556555421 247899999887 65555544443 222 4688888998
Q ss_pred cc----CC-----C-----CCCCeeEEEecccc
Q 036563 162 EA----LC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 162 ~~----~~-----~-----~~~~~D~v~~~~~l 180 (288)
.+ .. + .-+..|+++.+..+
T Consensus 84 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 84 TNSNVLPASCEEIINSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp SCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CCccCCHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 76 21 0 01368998876654
No 484
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=56.93 E-value=73 Score=25.40 Aligned_cols=91 Identities=9% Similarity=0.059 Sum_probs=56.2
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
..+|+=+|+ |.++..+++.+.. .+. ++++|.+++.++.+. . ++.++.+|..+
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~---------------~g~-v~vid~~~~~~~~~~-----~-----~~~~i~gd~~~ 60 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRG---------------SEV-FVLAEDENVRKKVLR-----S-----GANFVHGDPTR 60 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTT---------------SEE-EEEESCGGGHHHHHH-----T-----TCEEEESCTTC
T ss_pred CCEEEEECC--ChHHHHHHHHHHh---------------CCe-EEEEECCHHHHHHHh-----c-----CCeEEEcCCCC
Confidence 457888877 6777777777631 235 999999888765443 1 36788888765
Q ss_pred CC----CCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 164 LC----FEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 164 ~~----~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
.. ..-...|.|++...- +.....+....+.+.|+..+++
T Consensus 61 ~~~l~~a~i~~ad~vi~~~~~---d~~n~~~~~~a~~~~~~~~iia 103 (234)
T 2aef_A 61 VSDLEKANVRGARAVIVDLES---DSETIHCILGIRKIDESVRIIA 103 (234)
T ss_dssp HHHHHHTTCTTCSEEEECCSC---HHHHHHHHHHHHHHCSSSEEEE
T ss_pred HHHHHhcCcchhcEEEEcCCC---cHHHHHHHHHHHHHCCCCeEEE
Confidence 31 123468888864321 1112234455666778777765
No 485
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=56.35 E-value=1.2e+02 Score=27.50 Aligned_cols=96 Identities=20% Similarity=0.141 Sum_probs=53.6
Q ss_pred CeEEEecCCc-cHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh-------cC------CC
Q 036563 85 MKHLDVAGGT-GDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE-------RG------YP 150 (288)
Q Consensus 85 ~~vLDiG~G~-G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~-------~~------~~ 150 (288)
.+|.=||+|. |......+.. .+.+|+++|.+++.++.+++.... .+ ..
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~------------------~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~ 99 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFAR------------------VGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASA 99 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHT------------------TTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred CEEEEECcCHHHHHHHHHHHh------------------CCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 5788999886 4332222222 247899999999888776553211 00 00
Q ss_pred CCceEEEEcccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEE
Q 036563 151 DKSLLWVEGDAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFL 204 (288)
Q Consensus 151 ~~~v~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~ 204 (288)
.....+ ..|.+.+ ...|+|+..-. ....-...+++++...++|+..++
T Consensus 100 ~~~~~i-~~~~~~~----~~aDlVIeaVp-e~~~~k~~v~~~l~~~~~~~~ii~ 147 (463)
T 1zcj_A 100 KPKLRF-SSSTKEL----STVDLVVEAVF-EDMNLKKKVFAELSALCKPGAFLC 147 (463)
T ss_dssp CCCEEE-ESCGGGG----TTCSEEEECCC-SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred HHHhhh-cCCHHHH----CCCCEEEEcCC-CCHHHHHHHHHHHHhhCCCCeEEE
Confidence 011222 3444221 34799886543 111112567888888888877665
No 486
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=56.17 E-value=53 Score=26.86 Aligned_cols=90 Identities=8% Similarity=0.077 Sum_probs=50.3
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCce-EEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETR-IYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
+++|.=||||. .+..++..+.. .+.+ +.++|.+++..+...+.. .+.. ..+..
T Consensus 10 ~m~i~iiG~G~--mG~~~a~~l~~---------------~g~~~v~~~~~~~~~~~~~~~~~--------g~~~-~~~~~ 63 (266)
T 3d1l_A 10 DTPIVLIGAGN--LATNLAKALYR---------------KGFRIVQVYSRTEESARELAQKV--------EAEY-TTDLA 63 (266)
T ss_dssp GCCEEEECCSH--HHHHHHHHHHH---------------HTCCEEEEECSSHHHHHHHHHHT--------TCEE-ESCGG
T ss_pred CCeEEEEcCCH--HHHHHHHHHHH---------------CCCeEEEEEeCCHHHHHHHHHHc--------CCce-eCCHH
Confidence 35788899864 33333333210 1245 889999988766554432 2222 23333
Q ss_pred cCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 163 ALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 163 ~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
+. -...|+|+..-.-. ....+++.+...++++..++-
T Consensus 64 ~~---~~~~Dvvi~av~~~---~~~~v~~~l~~~~~~~~ivv~ 100 (266)
T 3d1l_A 64 EV---NPYAKLYIVSLKDS---AFAELLQGIVEGKREEALMVH 100 (266)
T ss_dssp GS---CSCCSEEEECCCHH---HHHHHHHHHHTTCCTTCEEEE
T ss_pred HH---hcCCCEEEEecCHH---HHHHHHHHHHhhcCCCcEEEE
Confidence 32 12579988654422 235667777777777766553
No 487
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=55.97 E-value=49 Score=23.08 Aligned_cols=32 Identities=16% Similarity=0.194 Sum_probs=23.7
Q ss_pred ChHHHHHHHHHcCCcEEEEEEeeCCeeEEEEe
Q 036563 254 PQEKFAAMISDAGFQKVEYENLVGGVVAIHSG 285 (288)
Q Consensus 254 ~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~~ 285 (288)
....+..++++.|++++..+...+|.+.+++-
T Consensus 65 a~~dI~~~~~~~G~~v~~~e~~~~g~~~i~I~ 96 (98)
T 1jdq_A 65 SKERIPETVKKLGHEVLEIEEVGPSEWKIYIK 96 (98)
T ss_dssp HHHHHHHHHHHSSCCEEEEEECSSSCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEEEecCCEEEEEEE
Confidence 35778889999999998876543576766663
No 488
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=55.83 E-value=25 Score=34.32 Aligned_cols=50 Identities=14% Similarity=0.040 Sum_probs=35.3
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHh
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRA 144 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~ 144 (288)
+..+|||+=||.|.++.-+.+.....+. .-..+.++|+++.+.+.-+.+.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~------------~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGL------------KLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTE------------EEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCC------------ceeEEEEEeCCHHHHHHHHHHC
Confidence 4568999999999999888765310000 0135679999999888777664
No 489
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=55.66 E-value=66 Score=26.50 Aligned_cols=81 Identities=12% Similarity=0.117 Sum_probs=52.2
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
++++|=.|++ |.++..+++.+.. .+.+|+.+|.++..++...+.+...+....++.++.+|+.+
T Consensus 11 ~k~vlVTGas-~gIG~aia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~ 74 (281)
T 3svt_A 11 DRTYLVTGGG-SGIGKGVAAGLVA---------------AGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN 74 (281)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC
Confidence 5567777764 5555555555421 35889999999988877776665543221368889999876
Q ss_pred CC-----C-----CCCCeeEEEecccc
Q 036563 164 LC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 164 ~~-----~-----~~~~~D~v~~~~~l 180 (288)
.. + .-+..|+++.+...
T Consensus 75 ~~~v~~~~~~~~~~~g~id~lv~nAg~ 101 (281)
T 3svt_A 75 EDETARAVDAVTAWHGRLHGVVHCAGG 101 (281)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCc
Confidence 42 0 01358998876654
No 490
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=55.56 E-value=61 Score=27.58 Aligned_cols=96 Identities=14% Similarity=0.052 Sum_probs=50.4
Q ss_pred CCeEEEecCCc-cH-HHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc
Q 036563 84 GMKHLDVAGGT-GD-VAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA 161 (288)
Q Consensus 84 ~~~vLDiG~G~-G~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~ 161 (288)
..+|.=+|+|. |. ++..++... ...++..+|++++....+..... ... +++... .|.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g-----------------~~~ev~L~Di~~~~~g~a~dl~~-~~~--~~i~~t-~d~ 72 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKG-----------------IADRLVLLDLSEGTKGATMDLEI-FNL--PNVEIS-KDL 72 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHT-----------------CCSEEEEECCC-----CHHHHHH-HTC--TTEEEE-SCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhcC-----------------CCCEEEEEcCCcchHHHHHHHhh-hcC--CCeEEe-CCH
Confidence 46899999986 33 333333321 12489999999863333433332 111 345543 554
Q ss_pred ccCCCCCCCeeEEEeccccc------------cccCHHHHHHHHHhhccCCcEEEE
Q 036563 162 EALCFEDSTMDGYTIAFGIR------------NVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 162 ~~~~~~~~~~D~v~~~~~l~------------~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
..+ ...|+|+...... ..+=...+.+++.+.. |++.+++
T Consensus 73 ~~l----~~aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv 123 (303)
T 2i6t_A 73 SAS----AHSKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLV 123 (303)
T ss_dssp GGG----TTCSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEE
T ss_pred HHH----CCCCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEE
Confidence 332 2479998765322 1111244566666665 9999876
No 491
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=55.36 E-value=91 Score=26.03 Aligned_cols=82 Identities=13% Similarity=-0.021 Sum_probs=49.7
Q ss_pred CCCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEE-Ecc
Q 036563 82 FPGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWV-EGD 160 (288)
Q Consensus 82 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~-~~d 160 (288)
.++++||=.|+ +|.++..+++.+.. .+.+|++++.++...+.....+.... . .++.++ .+|
T Consensus 9 ~~~~~vlVTGa-tG~iG~~l~~~L~~---------------~g~~V~~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~~~D 70 (342)
T 1y1p_A 9 PEGSLVLVTGA-NGFVASHVVEQLLE---------------HGYKVRGTARSASKLANLQKRWDAKY-P-GRFETAVVED 70 (342)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHH---------------TTCEEEEEESSHHHHHHHHHHHHHHS-T-TTEEEEECSC
T ss_pred CCCCEEEEECC-ccHHHHHHHHHHHH---------------CCCEEEEEeCCcccHHHHHHHhhccC-C-CceEEEEecC
Confidence 34567886665 67777777776531 34789999988765544433332111 1 367777 788
Q ss_pred cccCCC---CCCCeeEEEeccccc
Q 036563 161 AEALCF---EDSTMDGYTIAFGIR 181 (288)
Q Consensus 161 ~~~~~~---~~~~~D~v~~~~~l~ 181 (288)
+.+... .-..+|+|+.+....
T Consensus 71 ~~d~~~~~~~~~~~d~vih~A~~~ 94 (342)
T 1y1p_A 71 MLKQGAYDEVIKGAAGVAHIASVV 94 (342)
T ss_dssp TTSTTTTTTTTTTCSEEEECCCCC
T ss_pred CcChHHHHHHHcCCCEEEEeCCCC
Confidence 765421 112589988766543
No 492
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=55.21 E-value=80 Score=25.34 Aligned_cols=78 Identities=10% Similarity=0.047 Sum_probs=46.6
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeC-ChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDI-NPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~-s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++++|=.|+ +|.++..+++.+.. .+.+++.++. ++...+...+.+...+ .++.++.+|+.
T Consensus 4 ~k~~lVTGa-s~gIG~~ia~~l~~---------------~G~~V~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dv~ 64 (246)
T 3osu_A 4 TKSALVTGA-SRGIGRSIALQLAE---------------EGYNVAVNYAGSKEKAEAVVEEIKAKG---VDSFAIQANVA 64 (246)
T ss_dssp SCEEEETTC-SSHHHHHHHHHHHH---------------TTCEEEEEESSCHHHHHHHHHHHHHTT---SCEEEEECCTT
T ss_pred CCEEEEECC-CChHHHHHHHHHHH---------------CCCEEEEEeCCCHHHHHHHHHHHHhcC---CcEEEEEccCC
Confidence 345665554 45566666665431 3578888876 4455555555554443 46888889987
Q ss_pred cCC-----C-----CCCCeeEEEecccc
Q 036563 163 ALC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 163 ~~~-----~-----~~~~~D~v~~~~~l 180 (288)
+.. + .-+..|+++.+...
T Consensus 65 d~~~v~~~~~~~~~~~g~id~lv~nAg~ 92 (246)
T 3osu_A 65 DADEVKAMIKEVVSQFGSLDVLVNNAGI 92 (246)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 642 0 01368998877654
No 493
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=55.14 E-value=82 Score=25.43 Aligned_cols=79 Identities=13% Similarity=0.025 Sum_probs=49.3
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccc--
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDA-- 161 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~-- 161 (288)
++++|=.|++ |.++..+++.+.. .+.+|+.+|.++..++...+.+...+. .++.++..|+
T Consensus 12 ~k~vlVTGas-~gIG~aia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~ 73 (252)
T 3f1l_A 12 DRIILVTGAS-DGIGREAAMTYAR---------------YGATVILLGRNEEKLRQVASHINEETG--RQPQWFILDLLT 73 (252)
T ss_dssp TCEEEEESTT-SHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHHHHHS--CCCEEEECCTTT
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHHHhhcC--CCceEEEEeccc
Confidence 4567766655 5555555555421 358999999998887776665544321 2677888887
Q ss_pred ccCC----------CCCCCeeEEEecccc
Q 036563 162 EALC----------FEDSTMDGYTIAFGI 180 (288)
Q Consensus 162 ~~~~----------~~~~~~D~v~~~~~l 180 (288)
.+.. ..-+..|+++.+...
T Consensus 74 ~~~~~~~~~~~~~~~~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 74 CTSENCQQLAQRIAVNYPRLDGVLHNAGL 102 (252)
T ss_dssp CCHHHHHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCHHHHHHHHHHHHHhCCCCCEEEECCcc
Confidence 3321 011368999877654
No 494
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=55.07 E-value=6.7 Score=34.42 Aligned_cols=38 Identities=26% Similarity=0.423 Sum_probs=30.8
Q ss_pred HHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHHHh
Q 036563 186 IEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYDYY 223 (288)
Q Consensus 186 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~ 223 (288)
...+|..+..+|+|||+++++.+...+...++..+...
T Consensus 253 L~~~L~~a~~~L~~gGRl~VISFHSLEDRiVK~~f~~~ 290 (347)
T 3tka_A 253 IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMREN 290 (347)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCCEEEEEecCchhHHHHHHHHHHh
Confidence 46789999999999999999998777666666666554
No 495
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=54.73 E-value=6.6 Score=33.52 Aligned_cols=36 Identities=25% Similarity=0.464 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhccCCcEEEEEeccCCChHHHHHHHH
Q 036563 186 IEKALAEAYRVLKRGGRFLCLELSHVDIPVFKELYD 221 (288)
Q Consensus 186 ~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~ 221 (288)
...+|..+..+|+|||++.++.++..+...++.++.
T Consensus 212 L~~~L~~a~~~L~~gGrl~visfHSLEDRiVK~~~~ 247 (285)
T 1wg8_A 212 LKEFLEQAAEVLAPGGRLVVIAFHSLEDRVVKRFLR 247 (285)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEECSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEEecCcHHHHHHHHHHH
Confidence 577899999999999999999887766666665554
No 496
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=54.43 E-value=49 Score=22.68 Aligned_cols=70 Identities=16% Similarity=0.047 Sum_probs=44.0
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCC-ceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEE-TRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
.++|+=+|+ |..+..+++.+.. .+ .+++++|.++..++... . ..+.+...|..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~---------------~g~~~v~~~~r~~~~~~~~~----~-----~~~~~~~~d~~ 58 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKT---------------SSNYSVTVADHDLAALAVLN----R-----MGVATKQVDAK 58 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHH---------------CSSEEEEEEESCHHHHHHHH----T-----TTCEEEECCTT
T ss_pred cCeEEEECC--CHHHHHHHHHHHh---------------CCCceEEEEeCCHHHHHHHH----h-----CCCcEEEecCC
Confidence 457998988 6666666665421 23 78999999987665543 1 35667777765
Q ss_pred cCC---CCCCCeeEEEeccc
Q 036563 163 ALC---FEDSTMDGYTIAFG 179 (288)
Q Consensus 163 ~~~---~~~~~~D~v~~~~~ 179 (288)
+.. ..-..+|+|+....
T Consensus 59 ~~~~~~~~~~~~d~vi~~~~ 78 (118)
T 3ic5_A 59 DEAGLAKALGGFDAVISAAP 78 (118)
T ss_dssp CHHHHHHHTTTCSEEEECSC
T ss_pred CHHHHHHHHcCCCEEEECCC
Confidence 421 01125898886553
No 497
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=54.34 E-value=46 Score=28.49 Aligned_cols=98 Identities=10% Similarity=0.022 Sum_probs=51.8
Q ss_pred CeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhh----cCCCC-CceEEEEc
Q 036563 85 MKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALE----RGYPD-KSLLWVEG 159 (288)
Q Consensus 85 ~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~----~~~~~-~~v~~~~~ 159 (288)
++|.=||+|. .+..++..+.. .+.+|+++|.+++.++..++...- .+... .++.....
T Consensus 5 mki~iiG~G~--~G~~~a~~L~~---------------~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (359)
T 1bg6_A 5 KTYAVLGLGN--GGHAFAAYLAL---------------KGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTS 67 (359)
T ss_dssp CEEEEECCSH--HHHHHHHHHHH---------------TTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEES
T ss_pred CeEEEECCCH--HHHHHHHHHHh---------------CCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecC
Confidence 5888898875 33333332210 236899999998877665543100 00000 00000112
Q ss_pred ccccCCCCCCCeeEEEeccccccccCHHHHHHHHHhhccCCcEEEE
Q 036563 160 DAEALCFEDSTMDGYTIAFGIRNVTHIEKALAEAYRVLKRGGRFLC 205 (288)
Q Consensus 160 d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i 205 (288)
|..+. -..+|+|+..-.-.. ...+++.+...++++..++.
T Consensus 68 ~~~~~---~~~~D~vi~~v~~~~---~~~~~~~l~~~l~~~~~vv~ 107 (359)
T 1bg6_A 68 DIGLA---VKDADVILIVVPAIH---HASIAANIASYISEGQLIIL 107 (359)
T ss_dssp CHHHH---HTTCSEEEECSCGGG---HHHHHHHHGGGCCTTCEEEE
T ss_pred CHHHH---HhcCCEEEEeCCchH---HHHHHHHHHHhCCCCCEEEE
Confidence 22111 125898887554322 36678888888988776654
No 498
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=54.05 E-value=58 Score=26.79 Aligned_cols=78 Identities=12% Similarity=0.027 Sum_probs=50.9
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
++++|=.|++ |.++..+++.+.. .+.+|+.++.++..++...+.+...+ .++.++.+|+.+
T Consensus 4 ~k~~lVTGas-~GIG~aia~~la~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~d 64 (264)
T 3tfo_A 4 DKVILITGAS-GGIGEGIARELGV---------------AGAKILLGARRQARIEAIATEIRDAG---GTALAQVLDVTD 64 (264)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHH---------------TTCEEEEEESSHHHHHHHHHHHHHTT---CEEEEEECCTTC
T ss_pred CCEEEEeCCc-cHHHHHHHHHHHH---------------CCCEEEEEECCHHHHHHHHHHHHhcC---CcEEEEEcCCCC
Confidence 4466766665 4555555555421 35889999999988877777665543 468888889875
Q ss_pred CC-----C-----CCCCeeEEEecccc
Q 036563 164 LC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 164 ~~-----~-----~~~~~D~v~~~~~l 180 (288)
.. + .-+..|+++.+..+
T Consensus 65 ~~~v~~~~~~~~~~~g~iD~lVnnAG~ 91 (264)
T 3tfo_A 65 RHSVAAFAQAAVDTWGRIDVLVNNAGV 91 (264)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 42 0 01368998876654
No 499
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=53.92 E-value=65 Score=26.73 Aligned_cols=79 Identities=11% Similarity=0.080 Sum_probs=51.6
Q ss_pred CCCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEcccc
Q 036563 83 PGMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAE 162 (288)
Q Consensus 83 ~~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~ 162 (288)
++.++|=.|++. .++..+++.+.. .+.+|+.+|.++..++...+.+...+ .++.++.+|+.
T Consensus 27 ~~k~~lVTGas~-GIG~aia~~la~---------------~G~~V~~~~r~~~~~~~~~~~l~~~~---~~~~~~~~Dv~ 87 (283)
T 3v8b_A 27 PSPVALITGAGS-GIGRATALALAA---------------DGVTVGALGRTRTEVEEVADEIVGAG---GQAIALEADVS 87 (283)
T ss_dssp CCCEEEEESCSS-HHHHHHHHHHHH---------------TTCEEEEEESSHHHHHHHHHHHTTTT---CCEEEEECCTT
T ss_pred CCCEEEEECCCC-HHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCC
Confidence 355677777654 455555555421 35899999999888777766665443 46888999987
Q ss_pred cCC-----C-----CCCCeeEEEecccc
Q 036563 163 ALC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 163 ~~~-----~-----~~~~~D~v~~~~~l 180 (288)
+.. + .-+..|+++.+...
T Consensus 88 d~~~v~~~~~~~~~~~g~iD~lVnnAg~ 115 (283)
T 3v8b_A 88 DELQMRNAVRDLVLKFGHLDIVVANAGI 115 (283)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCCC
Confidence 641 0 01368998877654
No 500
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=53.65 E-value=51 Score=26.83 Aligned_cols=78 Identities=12% Similarity=0.015 Sum_probs=51.1
Q ss_pred CCeEEEecCCccHHHHHHHHhhhhhhhhhhhcccccccCCCceEEEEeCChhHHHHHHHHhhhcCCCCCceEEEEccccc
Q 036563 84 GMKHLDVAGGTGDVAFRILDTVNSIKRRALQDVLEDDLQEETRIYVCDINPNMLNVGKKRALERGYPDKSLLWVEGDAEA 163 (288)
Q Consensus 84 ~~~vLDiG~G~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~ 163 (288)
++++|=.|++ |.++..+++.+.. .+.+|+.+|.+++.++...+.+...+ .++.++.+|+.+
T Consensus 6 ~k~vlVTGas-~gIG~aia~~l~~---------------~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~Dv~~ 66 (257)
T 3imf_A 6 EKVVIITGGS-SGMGKGMATRFAK---------------EGARVVITGRTKEKLEEAKLEIEQFP---GQILTVQMDVRN 66 (257)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHH---------------TTCEEEEEESCHHHHHHHHHHHCCST---TCEEEEECCTTC
T ss_pred CCEEEEECCC-CHHHHHHHHHHHH---------------CCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEEccCCC
Confidence 4566666654 5556666555421 35889999999988877776665433 468889999876
Q ss_pred CC-----C-----CCCCeeEEEecccc
Q 036563 164 LC-----F-----EDSTMDGYTIAFGI 180 (288)
Q Consensus 164 ~~-----~-----~~~~~D~v~~~~~l 180 (288)
.. + .-+..|+++.+...
T Consensus 67 ~~~v~~~~~~~~~~~g~id~lv~nAg~ 93 (257)
T 3imf_A 67 TDDIQKMIEQIDEKFGRIDILINNAAG 93 (257)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 42 0 01368998876653
Done!