BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036568
VVVVVDIFDAEAKAVVRDAAGIKRVELLVSKENSTAFNINRKLLRYSAAAADGNRIGTAC
SKDDIVIYQGSTAPLPNGIPACTVQILNTCTCVSESESGGCSICNIHVNCGWFSSARLVN
PQVFRRIHYDDCLVNDGEALPPGQALSFQYANTFQYPLSVSSVVCCSA

High Scoring Gene Products

Symbol, full name Information P value
AT1G32583 protein from Arabidopsis thaliana 1.6e-40
TPD1
AT4G24972
protein from Arabidopsis thaliana 7.7e-32
AT4G32090 protein from Arabidopsis thaliana 0.00059

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036568
        (168 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:1009023131 - symbol:AT1G32583 "AT1G32583" spec...   431  1.6e-40   1
TAIR|locus:1006230300 - symbol:TPD1 "AT4G24972" species:3...   349  7.7e-32   1
TAIR|locus:2116702 - symbol:AT4G32090 species:3702 "Arabi...    90  0.00059   1


>TAIR|locus:1009023131 [details] [associations]
            symbol:AT1G32583 "AT1G32583" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0009408 "response to heat"
            evidence=IEP] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009408
            EMBL:DQ487503 IPI:IPI00656613 RefSeq:NP_001031128.1
            UniGene:At.49435 EnsemblPlants:AT1G32583.1 GeneID:3766880
            KEGG:ath:AT1G32583 TAIR:At1g32583 OMA:VEIFNSC PhylomeDB:Q1G3T1
            Genevestigator:Q2V4J6 Uniprot:Q1G3T1
        Length = 179

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 89/150 (59%), Positives = 110/150 (73%)

Query:    17 RDAAGIKRVELLVSKENSTAFNINRKLLRYSAAAADG-NRIGTACSKDDIVIYQGSTAPL 75
             R +  +K    +   EN TA  ++RKLL  S    DG NRIG  CSKDDIV++QGST PL
Sbjct:    39 RRSIALKARSFVSINENRTA--LSRKLL-LSPDIGDGTNRIGQDCSKDDIVLFQGSTNPL 95

Query:    76 PNGIPACTVQILNTCTCVSESESGGCSICNIHVNCGWFSSARLVNPQVFRRIHYDDCLVN 135
             P+G+P+ TV+I N+C  VS+     C+I  IHV+CGWFSS RLVNP+VFRR+ YDDCLVN
Sbjct:    96 PSGVPSYTVEIFNSC--VSD-----CNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCLVN 148

Query:   136 DGEALPPGQALSFQYANTFQYPLSVSSVVC 165
             DG+ L PGQ+LSFQYAN+F YPLSV+SV C
Sbjct:   149 DGQPLGPGQSLSFQYANSFSYPLSVASVSC 178


>TAIR|locus:1006230300 [details] [associations]
            symbol:TPD1 "AT4G24972" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0001709 "cell fate determination"
            evidence=IMP] [GO:0048653 "anther development" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0048653 GO:GO:0001709 EMBL:AY394846
            IPI:IPI00526307 RefSeq:NP_974612.1 UniGene:At.47965 DIP:DIP-29700N
            IntAct:Q6TLJ2 EnsemblPlants:AT4G24972.1 GeneID:2745725
            KEGG:ath:AT4G24972 TAIR:At4g24972 eggNOG:NOG325440
            HOGENOM:HOG000077765 InParanoid:Q6TLJ2 OMA:RIHINCG
            ProtClustDB:CLSN2915210 Genevestigator:Q6TLJ2 Uniprot:Q6TLJ2
        Length = 176

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 76/158 (48%), Positives = 98/158 (62%)

Query:    16 VRDAAGIK-RVELLVSKENSTAFNIN-RKLLRYSAA------AADGNRIGTACSKDDIVI 67
             V  + G K R  L ++K  +++ +I+ RK+L  S        + +  RIG  C   DIV+
Sbjct:    25 VEASGGEKLRDNLDLTKTTTSSPSISHRKMLLLSPGTGKTERSVEPERIGEKCKSTDIVV 84

Query:    68 YQGSTAPLPNGIPACTVQILNTCTCVSESESGGCSICNIHVNCGWFSSARLVNPQVFRRI 127
              Q  T P+PNGIP   V+I N C         GC I  IH+NCGWFSSA+L+NP+VF+RI
Sbjct:    85 NQAVTEPMPNGIPGYMVEITNQCM-------SGCIISRIHINCGWFSSAKLINPRVFKRI 137

Query:   128 HYDDCLVNDGEALPPGQALSFQYANTFQYPLSVSSVVC 165
             HYDDCLVN+G+ LP G  LSF YANTF Y LSV+ V C
Sbjct:   138 HYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTC 175


>TAIR|locus:2116702 [details] [associations]
            symbol:AT4G32090 species:3702 "Arabidopsis thaliana"
            [GO:0005576 "extracellular region" evidence=ISM] [GO:0006486
            "protein glycosylation" evidence=IEA] [GO:0008378
            "galactosyltransferase activity" evidence=IEA] [GO:0016020
            "membrane" evidence=IEA] InterPro:IPR002659 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0016020 GO:GO:0006486 GO:GO:0008378
            EMBL:AL021636 EMBL:AL161580 PANTHER:PTHR11214 IPI:IPI00538727
            PIR:T04636 RefSeq:NP_194937.1 UniGene:At.63745
            EnsemblPlants:AT4G32090.1 GeneID:829340 KEGG:ath:AT4G32090
            TAIR:At4g32090 eggNOG:NOG262319 HOGENOM:HOG000243728
            InParanoid:O49383 OMA:ATAQFTY PhylomeDB:O49383
            ProtClustDB:CLSN2686018 Genevestigator:O49383 Uniprot:O49383
        Length = 124

 Score = 90 (36.7 bits), Expect = 0.00059, P = 0.00059
 Identities = 23/74 (31%), Positives = 36/74 (48%)

Query:    78 GIPACTVQILNTCTCVSESESGGCSICNIHVNCGWFSSARLVNPQVFRRIHYDDCLVNDG 137
             G P   V ++NTC C  +         ++ ++CG F+ A+ V P + +    + CL+  G
Sbjct:    42 GQPEWKVTVINTCNCFQK---------HVTLSCGGFAPAKPVKPLLLQP-QGNTCLMIKG 91

Query:   138 EALPPGQALSFQYA 151
              ALP G    F YA
Sbjct:    92 AALPAGATAQFTYA 105


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.134   0.409    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      168       168   0.00079  108 3  11 22  0.36    32
                                                     31  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  583 (62 KB)
  Total size of DFA:  149 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.20u 0.12s 14.32t   Elapsed:  00:00:01
  Total cpu time:  14.20u 0.12s 14.32t   Elapsed:  00:00:01
  Start:  Thu May  9 19:11:25 2013   End:  Thu May  9 19:11:26 2013

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