BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>036574
MSFSQALLAAGYSQGNYEQARQVVFRLLQFVAGSQPMNALAFVLDGLYYGVSDFEYAAYS
MLRVDPAFGHDEKVHLHNHHCLMMYGSVASTSGNVL

High Scoring Gene Products

Symbol, full name Information P value
AT2G38330 protein from Arabidopsis thaliana 5.4e-10
AT4G38380 protein from Arabidopsis thaliana 2.3e-07
AT1G51340 protein from Arabidopsis thaliana 9.1e-07
FRD3
FERRIC REDUCTASE DEFECTIVE 3 		protein from Arabidopsis thaliana 9.4e-07

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  036574
        (96 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2057135 - symbol:AT2G38330 "AT2G38330" species...   152  5.4e-10   1
TAIR|locus:2121783 - symbol:AT4G38380 species:3702 "Arabi...   128  2.3e-07   1
TAIR|locus:2008236 - symbol:AT1G51340 species:3702 "Arabi...   122  9.1e-07   1
TAIR|locus:2077477 - symbol:FRD3 "FERRIC REDUCTASE DEFECT...   122  9.4e-07   1


>TAIR|locus:2057135 [details] [associations]
            symbol:AT2G38330 "AT2G38330" species:3702 "Arabidopsis
            thaliana" [GO:0005215 "transporter activity" evidence=ISS]
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
            transmembrane transport" evidence=IEA] [GO:0015238 "drug
            transmembrane transporter activity" evidence=IEA] [GO:0015297
            "antiporter activity" evidence=IEA;ISS] [GO:0016020 "membrane"
            evidence=IEA;ISS] [GO:0055085 "transmembrane transport"
            evidence=IEA] InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0031969 GO:GO:0015238
            GO:GO:0015297 eggNOG:COG0534 TIGRFAMs:TIGR00797 EMBL:AC004683
            UniGene:At.37311 UniGene:At.74107 HOGENOM:HOG000253153
            EMBL:BT004001 EMBL:BT005521 IPI:IPI00529504 PIR:T02512
            RefSeq:NP_181367.2 ProteinModelPortal:Q84K71 IntAct:Q84K71
            PaxDb:Q84K71 PRIDE:Q84K71 EnsemblPlants:AT2G38330.1 GeneID:818413
            KEGG:ath:AT2G38330 TAIR:At2g38330 InParanoid:Q84K71 OMA:FAYDGVF
            PhylomeDB:Q84K71 ProtClustDB:CLSN2918200 Genevestigator:Q84K71
            Uniprot:Q84K71
        Length = 521

 Score = 152 (58.6 bits), Expect = 5.4e-10, P = 5.4e-10
 Identities = 30/35 (85%), Positives = 33/35 (94%)

Query:    30 FVAGSQPMNALAFVLDGLYYGVSDFEYAAYSMLRV 64
             FVAGSQP+NALAFVLDGLYYGVSDF +AAYSM+ V
Sbjct:   430 FVAGSQPVNALAFVLDGLYYGVSDFGFAAYSMVIV 464


>TAIR|locus:2121783 [details] [associations]
            symbol:AT4G38380 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
            transmembrane transport" evidence=IEA] [GO:0015238 "drug
            transmembrane transporter activity" evidence=IEA] [GO:0015297
            "antiporter activity" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=IDA] InterPro:IPR002528
            Pfam:PF01554 GO:GO:0016021 GO:GO:0009507 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0031969 GO:GO:0015238 GO:GO:0015297
            TIGRFAMs:TIGR00797 EMBL:AL161593 EMBL:AL035539 IPI:IPI00528910
            PIR:T05666 RefSeq:NP_195551.5 UniGene:At.65831
            ProteinModelPortal:Q9SVE7 PRIDE:Q9SVE7 EnsemblPlants:AT4G38380.1
            GeneID:829995 KEGG:ath:AT4G38380 TAIR:At4g38380 OMA:EMFIPAR
            Genevestigator:Q9SVE7 Uniprot:Q9SVE7
        Length = 560

 Score = 128 (50.1 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 32/64 (50%), Positives = 42/64 (65%)

Query:     1 MSFSQALLAAGYSQGNYEQARQVVFRLLQFVAGSQPMNALAFVLDGLYYGVSDFEYAAYS 60
             MSFS     AG    + E  R +V + + FVA +QP+ ALAF+ DGL+YG+SDF YAA S
Sbjct:   444 MSFSSI---AGLFSKDPEVLR-IVRKGVLFVAATQPITALAFIFDGLHYGMSDFPYAACS 499

Query:    61 MLRV 64
             M+ V
Sbjct:   500 MMVV 503


>TAIR|locus:2008236 [details] [associations]
            symbol:AT1G51340 species:3702 "Arabidopsis thaliana"
            [GO:0005886 "plasma membrane" evidence=ISM] [GO:0006855 "drug
            transmembrane transport" evidence=IEA] [GO:0015238 "drug
            transmembrane transporter activity" evidence=IEA] [GO:0015297
            "antiporter activity" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
            [GO:0019761 "glucosinolate biosynthetic process" evidence=RCA]
            InterPro:IPR002528 Pfam:PF01554 GO:GO:0016021 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0015238 GO:GO:0015297
            eggNOG:COG0534 TIGRFAMs:TIGR00797 GO:GO:0005216 EMBL:AC006085
            OMA:GAEMRNS HOGENOM:HOG000253153 EMBL:BX818238 IPI:IPI00518906
            IPI:IPI00524609 PIR:D96551 RefSeq:NP_564588.2 RefSeq:NP_974000.1
            UniGene:At.26628 ProteinModelPortal:Q9SYD6 PaxDb:Q9SYD6
            PRIDE:Q9SYD6 EnsemblPlants:AT1G51340.2 GeneID:841557
            KEGG:ath:AT1G51340 TAIR:At1g51340 InParanoid:Q9SYD6
            PhylomeDB:Q9SYD6 ProtClustDB:CLSN2918502 Genevestigator:Q9SYD6
            Uniprot:Q9SYD6
        Length = 515

 Score = 122 (48.0 bits), Expect = 9.1e-07, P = 9.1e-07
 Identities = 24/37 (64%), Positives = 30/37 (81%)

Query:    28 LQFVAGSQPMNALAFVLDGLYYGVSDFEYAAYSMLRV 64
             L FVAG+QP+NALAFV DG+ +G SDF YAA S++ V
Sbjct:   428 LPFVAGTQPINALAFVFDGVNFGASDFGYAAASLVMV 464


>TAIR|locus:2077477 [details] [associations]
            symbol:FRD3 "FERRIC REDUCTASE DEFECTIVE 3" species:3702
            "Arabidopsis thaliana" [GO:0005886 "plasma membrane"
            evidence=ISM;IDA] [GO:0006855 "drug transmembrane transport"
            evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
            evidence=IEA] [GO:0015297 "antiporter activity" evidence=IEA;ISS]
            [GO:0016020 "membrane" evidence=IEA;ISS] [GO:0055085 "transmembrane
            transport" evidence=IEA] [GO:0005215 "transporter activity"
            evidence=ISS] [GO:0006879 "cellular iron ion homeostasis"
            evidence=IMP] [GO:0015137 "citrate transmembrane transporter
            activity" evidence=IDA] [GO:0071281 "cellular response to iron ion"
            evidence=IEP] [GO:0071369 "cellular response to ethylene stimulus"
            evidence=IEP] [GO:0071732 "cellular response to nitric oxide"
            evidence=IEP] [GO:0006826 "iron ion transport" evidence=RCA]
            [GO:0010106 "cellular response to iron ion starvation"
            evidence=RCA] [GO:0010167 "response to nitrate" evidence=RCA]
            [GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
            [GO:0015706 "nitrate transport" evidence=RCA] [GO:0045492 "xylan
            biosynthetic process" evidence=RCA] InterPro:IPR002528 Pfam:PF01554
            GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0071281 GO:GO:0006879 GO:GO:0015238 GO:GO:0071732
            GO:GO:0015297 EMBL:AC013483 eggNOG:COG0534 TIGRFAMs:TIGR00797
            GO:GO:0005216 GO:GO:0071369 EMBL:AC074395 EMBL:AF448231
            EMBL:AY056439 EMBL:AY057517 EMBL:AY133652 EMBL:BT006370
            IPI:IPI00531718 RefSeq:NP_001154595.1 RefSeq:NP_187461.1
            UniGene:At.17333 ProteinModelPortal:Q9SFB0 IntAct:Q9SFB0
            STRING:Q9SFB0 PRIDE:Q9SFB0 EnsemblPlants:AT3G08040.1
            EnsemblPlants:AT3G08040.2 GeneID:819995 KEGG:ath:AT3G08040
            TAIR:At3g08040 HOGENOM:HOG000253153 InParanoid:Q9SFB0 OMA:ARSARHY
            PhylomeDB:Q9SFB0 ProtClustDB:CLSN2915580 Genevestigator:Q9SFB0
            GO:GO:0015137 Uniprot:Q9SFB0
        Length = 526

 Score = 122 (48.0 bits), Expect = 9.4e-07, P = 9.4e-07
 Identities = 22/37 (59%), Positives = 30/37 (81%)

Query:    28 LQFVAGSQPMNALAFVLDGLYYGVSDFEYAAYSMLRV 64
             + F+A +QP+N+LAFVLDG+ +G SDF Y AYSM+ V
Sbjct:   432 IPFIAATQPINSLAFVLDGVNFGASDFAYTAYSMVGV 468


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.135   0.400    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       96        96   0.00091  102 3  11 22  0.45    29
                                                     29  0.43    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  504 (54 KB)
  Total size of DFA:  102 KB (2072 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.46u 0.12s 9.58t   Elapsed:  00:00:00
  Total cpu time:  9.46u 0.12s 9.58t   Elapsed:  00:00:00
  Start:  Thu May  9 19:16:38 2013   End:  Thu May  9 19:16:38 2013

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