BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036574
         (96 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q84K71|MATE2_ARATH MATE efflux family protein 2, chloroplastic OS=Arabidopsis thaliana
           GN=DTX44 PE=2 SV=1
          Length = 521

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/100 (46%), Positives = 55/100 (55%), Gaps = 39/100 (39%)

Query: 4   SQALLAAGYSQGNYEQARQVVFRLLQ---------------------------------- 29
           +Q+LLA  YSQG Y+QAR+V+F +LQ                                  
Sbjct: 365 AQSLLATTYSQGEYKQAREVLFGVLQVGLATGTGLAAVLFITFEPFSSLFTTDSEVLKIA 424

Query: 30  -----FVAGSQPMNALAFVLDGLYYGVSDFEYAAYSMLRV 64
                FVAGSQP+NALAFVLDGLYYGVSDF +AAYSM+ V
Sbjct: 425 LSGTLFVAGSQPVNALAFVLDGLYYGVSDFGFAAYSMVIV 464


>sp|Q9SVE7|MATE3_ARATH MATE efflux family protein 3, chloroplastic OS=Arabidopsis thaliana
           GN=DTX45 PE=2 SV=2
          Length = 560

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/64 (50%), Positives = 42/64 (65%), Gaps = 4/64 (6%)

Query: 1   MSFSQALLAAGYSQGNYEQARQVVFRLLQFVAGSQPMNALAFVLDGLYYGVSDFEYAAYS 60
           MSFS     AG    + E  R +V + + FVA +QP+ ALAF+ DGL+YG+SDF YAA S
Sbjct: 444 MSFSSI---AGLFSKDPEVLR-IVRKGVLFVAATQPITALAFIFDGLHYGMSDFPYAACS 499

Query: 61  MLRV 64
           M+ V
Sbjct: 500 MMVV 503


>sp|Q9SFB0|FRD3_ARATH MATE efflux family protein FRD3 OS=Arabidopsis thaliana GN=FRD3
           PE=1 SV=1
          Length = 526

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/37 (59%), Positives = 30/37 (81%)

Query: 28  LQFVAGSQPMNALAFVLDGLYYGVSDFEYAAYSMLRV 64
           + F+A +QP+N+LAFVLDG+ +G SDF Y AYSM+ V
Sbjct: 432 IPFIAATQPINSLAFVLDGVNFGASDFAYTAYSMVGV 468


>sp|Q9SYD6|MATE1_ARATH MATE efflux family protein 1 OS=Arabidopsis thaliana GN=MATE PE=2
           SV=2
          Length = 515

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/37 (64%), Positives = 30/37 (81%)

Query: 28  LQFVAGSQPMNALAFVLDGLYYGVSDFEYAAYSMLRV 64
           L FVAG+QP+NALAFV DG+ +G SDF YAA S++ V
Sbjct: 428 LPFVAGTQPINALAFVFDGVNFGASDFGYAAASLVMV 464


>sp|O94617|UAP1_SCHPO Probable UDP-N-acetylglucosamine pyrophosphorylase
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=uap1 PE=1 SV=1
          Length = 475

 Score = 29.3 bits (64), Expect = 7.1,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 11/59 (18%)

Query: 38  NALAFVLDGLYYGVS---DFEYAAYSMLRVDPAFGHDEKVHL----HNHHCLMMYGSVA 89
           N L   +D ++ G++     E A  ++ ++DPA    EKV L    HNH C++ Y  ++
Sbjct: 252 NVLVLPVDPVFIGMATTKKLEVATKTVEKIDPA----EKVGLLVSSHNHPCVVEYSEIS 306


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.324    0.135    0.400 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,969,714
Number of Sequences: 539616
Number of extensions: 1096145
Number of successful extensions: 2872
Number of sequences better than 100.0: 6
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2867
Number of HSP's gapped (non-prelim): 7
length of query: 96
length of database: 191,569,459
effective HSP length: 66
effective length of query: 30
effective length of database: 155,954,803
effective search space: 4678644090
effective search space used: 4678644090
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)