Query         036575
Match_columns 528
No_of_seqs    205 out of 2041
Neff          11.0
Searched_HMMs 46136
Date          Fri Mar 29 03:21:48 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036575.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036575hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0156 Cytochrome P450 CYP2 s 100.0 4.6E-85   1E-89  632.1  44.0  454   49-525    25-488 (489)
  2 KOG0158 Cytochrome P450 CYP3/C 100.0 3.1E-82 6.8E-87  602.0  39.4  457   40-525    21-499 (499)
  3 PLN02971 tryptophan N-hydroxyl 100.0 9.9E-79 2.1E-83  612.6  46.2  466   48-524    55-533 (543)
  4 PLN02687 flavonoid 3'-monooxyg 100.0 3.7E-78   8E-83  606.7  45.9  469   40-525    24-509 (517)
  5 PLN00110 flavonoid 3',5'-hydro 100.0 3.8E-78 8.2E-83  602.8  45.0  461   48-526    29-498 (504)
  6 PLN03234 cytochrome P450 83B1; 100.0 2.7E-78 5.7E-83  607.4  44.0  459   48-524    26-498 (499)
  7 PTZ00404 cytochrome P450; Prov 100.0 4.1E-78 8.9E-83  603.4  43.0  454   46-524    25-482 (482)
  8 PLN02183 ferulate 5-hydroxylas 100.0 9.4E-78   2E-82  603.7  44.4  458   49-525    35-512 (516)
  9 PLN03112 cytochrome P450 famil 100.0 2.3E-77 4.9E-82  602.3  46.4  473   41-525    23-508 (514)
 10 PLN02290 cytokinin trans-hydro 100.0 1.1E-77 2.4E-82  604.9  41.3  452   45-525    37-515 (516)
 11 PLN02394 trans-cinnamate 4-mon 100.0 1.3E-76 2.9E-81  595.7  46.7  464   47-526    27-503 (503)
 12 PLN02966 cytochrome P450 83A1  100.0 3.2E-76 6.9E-81  591.1  43.9  459   48-524    27-499 (502)
 13 PLN00168 Cytochrome P450; Prov 100.0 1.6E-75 3.5E-80  587.9  46.6  466   48-526    33-518 (519)
 14 KOG0157 Cytochrome P450 CYP4/C 100.0 1.4E-76   3E-81  586.2  36.9  456   48-526    33-497 (497)
 15 PLN02655 ent-kaurene oxidase   100.0 6.8E-76 1.5E-80  583.2  41.9  458   52-526     1-465 (466)
 16 KOG0159 Cytochrome P450 CYP11/ 100.0 7.5E-76 1.6E-80  544.4  35.8  457   47-525    47-518 (519)
 17 PLN03018 homomethionine N-hydr 100.0   1E-73 2.3E-78  571.4  47.1  469   48-526    38-525 (534)
 18 PLN02169 fatty acid (omega-1)- 100.0 8.5E-74 1.9E-78  570.2  40.3  448   49-524    30-499 (500)
 19 PLN03195 fatty acid omega-hydr 100.0 1.1E-73 2.3E-78  575.5  40.8  459   50-525    30-516 (516)
 20 PLN02500 cytochrome P450 90B1  100.0 1.2E-73 2.7E-78  571.2  40.4  436   46-523    34-488 (490)
 21 PF00067 p450:  Cytochrome P450 100.0 1.1E-74 2.4E-79  581.3  28.8  449   52-521     1-463 (463)
 22 PLN02738 carotene beta-ring hy 100.0 1.1E-72 2.3E-77  569.8  41.4  457   49-526   114-596 (633)
 23 PLN02774 brassinosteroid-6-oxi 100.0 1.8E-72   4E-77  558.2  40.4  425   49-523    30-462 (463)
 24 PLN02196 abscisic acid 8'-hydr 100.0 1.6E-72 3.5E-77  558.0  39.6  429   45-524    30-462 (463)
 25 PLN02302 ent-kaurenoic acid ox 100.0   4E-71 8.6E-76  555.9  41.7  442   44-526    36-489 (490)
 26 PLN03141 3-epi-6-deoxocathaste 100.0 2.1E-70 4.5E-75  542.3  38.4  436   48-527     5-452 (452)
 27 PLN02426 cytochrome P450, fami 100.0 4.2E-70 9.1E-75  542.7  40.1  441   58-526    49-501 (502)
 28 PLN02987 Cytochrome P450, fami 100.0 4.9E-70 1.1E-74  538.0  39.7  437   44-526    24-470 (472)
 29 PLN02936 epsilon-ring hydroxyl 100.0 1.2E-69 2.7E-74  540.7  40.4  456   49-526    11-483 (489)
 30 KOG0684 Cytochrome P450 [Secon 100.0 7.9E-68 1.7E-72  478.2  32.9  441   50-525    31-485 (486)
 31 PLN02648 allene oxide synthase 100.0 4.4E-61 9.5E-66  470.2  26.8  400   46-498    13-462 (480)
 32 COG2124 CypX Cytochrome P450 [ 100.0 6.4E-56 1.4E-60  429.2  31.2  378   73-524    25-410 (411)
 33 PF08492 SRP72:  SRP72 RNA-bind  62.6     5.8 0.00013   26.2   1.7    8  442-449    44-51  (59)
 34 PF12554 MOZART1:  Mitotic-spin  52.9      44 0.00094   21.1   4.3   43  319-361     6-48  (48)
 35 PF12273 RCR:  Chitin synthesis  51.1      17 0.00037   28.9   3.1    7   48-54     30-36  (130)
 36 PHA02902 putative IMV membrane  43.1      39 0.00085   22.4   3.1   16   17-32      6-21  (70)
 37 KOG3506 40S ribosomal protein   39.5      14  0.0003   23.7   0.6   11  461-471    12-22  (56)
 38 PF12508 DUF3714:  Protein of u  39.4      24 0.00052   30.4   2.3   43  378-423    52-94  (200)
 39 PF05952 ComX:  Bacillus compet  38.1      34 0.00075   22.4   2.3   18  342-359     5-22  (57)
 40 PF01102 Glycophorin_A:  Glycop  37.2      35 0.00076   26.7   2.7   27   18-44     67-93  (122)
 41 PF15330 SIT:  SHP2-interacting  36.6      69  0.0015   24.4   4.1   12   57-68     45-56  (107)
 42 PF14129 DUF4296:  Domain of un  34.7 1.8E+02  0.0039   21.1   6.6   50  315-364    29-78  (87)
 43 PF09201 SRX:  SRX;  InterPro:   33.9      34 0.00074   27.0   2.1   23  469-491    19-41  (148)
 44 PF11608 Limkain-b1:  Limkain b  33.0 1.5E+02  0.0032   21.5   4.9   40   72-113    19-58  (90)
 45 PF15300 INT_SG_DDX_CT_C:  INTS  31.5      23  0.0005   24.0   0.8   34  352-392    21-54  (65)
 46 PRK06789 flagellar motor switc  31.4      54  0.0012   23.0   2.6   41  384-425    21-63  (74)
 47 COG0851 MinE Septum formation   31.2      79  0.0017   22.9   3.4   42  325-366     4-52  (88)
 48 PF13625 Helicase_C_3:  Helicas  28.6 1.3E+02  0.0027   23.9   4.7   37   72-113    76-113 (129)
 49 KOG3302 TATA-box binding prote  27.1      18 0.00039   30.5  -0.4   56  439-494    50-116 (200)
 50 PF14550 Peptidase_U35_2:  Puta  26.9      37  0.0008   26.6   1.3   32  401-435    70-101 (122)
 51 PRK13713 conjugal transfer pro  26.9   3E+02  0.0065   21.3   6.8   76  270-351     5-92  (118)
 52 PF05261 Tra_M:  TraM protein,   26.5 3.2E+02  0.0069   21.4   6.2   91  269-365    11-122 (127)
 53 KOG0114 Predicted RNA-binding   25.7 2.9E+02  0.0064   20.9   5.6   60   49-113    11-76  (124)
 54 COG2101 SPT15 TATA-box binding  24.6      25 0.00053   29.1  -0.0   36  439-474    35-70  (185)
 55 PF11227 DUF3025:  Protein of u  23.9      49  0.0011   28.7   1.6   20  426-445   192-211 (212)
 56 PF07886 BA14K:  BA14K-like pro  22.9      78  0.0017   17.8   1.7   16  456-471    16-31  (31)
 57 PRK13467 F0F1 ATP synthase sub  21.7 1.4E+02   0.003   20.5   3.1   24  336-359    20-43  (66)
 58 cd08780 Death_TRADD Death Doma  21.5 3.1E+02  0.0067   20.1   4.9   42  139-181    12-61  (90)
 59 PRK13991 cell division topolog  20.8 2.1E+02  0.0045   20.9   4.0   18  349-366    35-52  (87)
 60 PF10264 Stork_head:  Winged he  20.1 1.1E+02  0.0023   21.9   2.4   36  336-371    13-50  (80)

No 1  
>KOG0156 consensus Cytochrome P450 CYP2 subfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=4.6e-85  Score=632.10  Aligned_cols=454  Identities=41%  Similarity=0.709  Sum_probs=398.7

Q ss_pred             CCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccc-cc
Q 036575           49 RTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKE-SA  125 (528)
Q Consensus        49 ~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~-~~  125 (528)
                      .+.||||+++|+|||++++.....++.+.+|+++|  ||+|++|+|+.++|+|+|+++++|++..  ..|+.||... ..
T Consensus        25 ~~lPPGP~~lPiIGnl~~l~~~~~h~~~~~ls~~y--Gpi~tl~lG~~~~Vviss~~~akE~l~~~d~~fa~Rp~~~~~~  102 (489)
T KOG0156|consen   25 RNLPPGPPPLPIIGNLHQLGSLPPHRSFRKLSKKY--GPVFTLRLGSVPVVVISSYEAAKEVLVKQDLEFADRPDPTATL  102 (489)
T ss_pred             CCCCcCCCCCCccccHHHcCCCchhHHHHHHHHHh--CCeEEEEecCceEEEECCHHHHHHHHHhCCccccCCCCchhhH
Confidence            77899999999999999998656999999999999  9999999999999999999999999986  8899999722 22


Q ss_pred             hhee-ccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHHH
Q 036575          126 YELL-FHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMM  204 (528)
Q Consensus       126 ~~~~-~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  204 (528)
                      .... .+.+++++.+|+.||.+||.....+++.+.+++....-.++++.+++.+.+ .+++++||+.+.+..++.++|++
T Consensus       103 ~~~~~~~~~i~~a~yG~~Wr~~Rr~~~~~L~~~~~~~~~~~~R~~E~~~l~~~l~~-~~~~~~vdl~~~l~~~~~nvI~~  181 (489)
T KOG0156|consen  103 KYLSYGGKGIVFAPYGDYWREMRRFALTELRSFGRGKSFMEIREEEVDELVKKLSK-SKKGEPVDLSELLDLLVGNVICR  181 (489)
T ss_pred             HHhcCCCCceEeCCCcHHHHHHHHHHHHHhcChhhhhhhHHHHHHHHHHHHHHHHh-cCCCceeeHHHHHHHHHHHHHHH
Confidence            3333 448999998999999999999999999999999988889999999999987 32237999999999999999999


Q ss_pred             HHHhcccccCccccCCCCCCch-HHHHHHHHHHHhhcccccccccc-cccccc-hhhHHHHHHHHhhhHHHHHHHHHHHH
Q 036575          205 SVFGRSYEFGEKCNYHDDDGSH-ELEGLVREGYELLGTFNWSDHFP-VLSWFD-LQGVRKRCRKLVGKVNSFVSKIIEEH  281 (528)
Q Consensus       205 ~~fG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~  281 (528)
                      ++||.++...+       +... ++.+.+.+..+..+...+.+++| ++.+++ ..+..++......++..++++.|+++
T Consensus       182 ~~fG~rf~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~d~~p~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~i~eh  254 (489)
T KOG0156|consen  182 MLFGRRFEEED-------EEEFLELKELVEESLELLGSFNLSDYFPFLLRWLDGISGLEKRLKKVSKRLDEFLERIIDEH  254 (489)
T ss_pred             HHhCCccccCC-------chHHHHHHHHHHHHHHHhCCccHHHHhhHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998642       1233 58889999999999999999999 677774 23466666666677999999999999


Q ss_pred             HHHhhhcccCCCCCCCCCCcHHHHHhhcCCCC---CCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHH
Q 036575          282 KVKRINKNINGGCCDVDEGDFVDVLLGLDGEN---RLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQI  358 (528)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~  358 (528)
                      ++... .   +    +. .|+++.++...+++   .+++++|...+.++++||+|||++++.|++.+|++||++|+|+++
T Consensus       255 ~~~~~-~---~----~~-~D~vD~lL~~~~~~~~~~~t~~~i~~~~~dl~~AGtdTta~Tl~Wa~a~Ll~~Pev~~K~qe  325 (489)
T KOG0156|consen  255 REKIG-D---E----EG-RDFVDALLKLMKEEKAEGLTDDHLKALILDLFLAGTDTTATTLEWAMAELLNNPEVQKKLQE  325 (489)
T ss_pred             Hhhhc-c---C----CC-CcHHHHHHHhhcccccCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            87651 1   0    23 89999999875432   299999999999999999999999999999999999999999999


Q ss_pred             HHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCCCCC
Q 036575          359 EIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVWPEA  438 (528)
Q Consensus       359 Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~~~p  438 (528)
                      ||++++|.++.++.+|+.+||||+|||+|++|++|++|... +|.+++|+.|+||.|||||.|.+|.|++||||++|+||
T Consensus       326 EId~vvG~~r~v~e~D~~~lpYL~Avi~E~~Rl~p~~Pl~~-ph~~~~d~~i~Gy~IPkgT~v~vn~~ai~rDp~vw~dP  404 (489)
T KOG0156|consen  326 EIDEVVGKGRLVSESDLPKLPYLKAVIKETLRLHPPLPLLL-PRETTEDTKIGGYDIPKGTTVLVNLWAIHRDPKVWEDP  404 (489)
T ss_pred             HHHHHhCCCCCCChhhhccCHHHHHHHHHHHhcCCCccccc-cccccCCeeEcCEEcCCCCEEEEeehhhhcCCccCCCc
Confidence            99999998877999999999999999999999999999875 99999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccCcee
Q 036575          439 NEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKNSLV  518 (528)
Q Consensus       439 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (528)
                      ++|+||||++.+ +.......++|||.|+|+|||..+|++++.++++.|+++|+|++.++ .+++... +++...+.++.
T Consensus       405 ~eF~PERFl~~~-d~~~~~~~~iPFG~GRR~CpG~~La~~~l~l~la~llq~F~w~~~~~-~~d~~e~-~~~~~~~~pl~  481 (489)
T KOG0156|consen  405 EEFKPERFLDSN-DGKGLDFKLIPFGSGRRICPGEGLARAELFLFLANLLQRFDWKLPGG-KVDMEEA-GLTLKKKKPLK  481 (489)
T ss_pred             cccChhhhcCCc-cccCCceEecCCCCCcCCCCcHHHHHHHHHHHHHHHHheeeeecCCC-CCCCccc-ccceecCCcce
Confidence            999999999864 22225678999999999999999999999999999999999999877 6677666 46666777888


Q ss_pred             EEeeecc
Q 036575          519 CKAVPRF  525 (528)
Q Consensus       519 ~~~~~r~  525 (528)
                      +...+|.
T Consensus       482 ~~~~~r~  488 (489)
T KOG0156|consen  482 AVPVPRL  488 (489)
T ss_pred             eeeecCC
Confidence            8888774


No 2  
>KOG0158 consensus Cytochrome P450 CYP3/CYP5/CYP6/CYP9 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=3.1e-82  Score=601.99  Aligned_cols=457  Identities=27%  Similarity=0.421  Sum_probs=363.2

Q ss_pred             hhhccccCCCCCCCCCCCCcccccchhhcCCc-hHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--ccc
Q 036575           40 YKSRFSTQTRTAIPGPSGLPILGMVLAFTGSL-THRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAF  116 (528)
Q Consensus        40 ~~~~~~~~~~~~~PgP~~~p~~G~~~~~~~~~-~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~  116 (528)
                      .++...++..+.+|||++.|++||+..+...+ ..........+|  |+++.++.+.++.++|+|||.+++|+.+  ++|
T Consensus        21 ~~~~~~yw~rrGi~~~~p~p~~Gn~~~~~~~~~~~~~~~~~~~~~--~~~~G~y~~~~p~l~v~D~elik~I~ik~F~~F   98 (499)
T KOG0158|consen   21 LRWTYSYWRRRGIPGPKPLPFLGNLPGMLKRERPGDLLLDIYTKY--RPVVGIYEGRQPALLVSDPELIKEILIKDFDNF   98 (499)
T ss_pred             HHhhhhhhccCCCCCCCCCCcEecHHHHHhccCcHHHHHHHHhcC--CCEEEEEecCCcceEecCHHHHHHHHHHhCccC
Confidence            33344455577999999999999999987542 345555555566  8999999999999999999999999985  888


Q ss_pred             CC--CCccccchheeccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHH
Q 036575          117 AD--RPVKESAYELLFHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVL  194 (528)
Q Consensus       117 ~~--~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~  194 (528)
                      .+  ++........+...++ +...|++||++|..+ +|.|++.+++++.+.++++++++++.+++....+..+++.+.+
T Consensus        99 ~~r~~~~~~d~~~~l~~~~L-f~~~g~~WK~lR~~l-sP~Fts~kmk~m~~t~~~~~~~l~~~l~~~~~~~~~~~~~dl~  176 (499)
T KOG0158|consen   99 YNRKRPIYGDPEDPLSALNL-FFLRGERWKRLRTKL-SPTFTSGKLKKMFPTMEEVGDELVRHLRRKSEGGQEGEIKDLC  176 (499)
T ss_pred             cCCCCCCcCCCCCcccccCc-hhccCchHHHHHHhh-ccccchhhHHHHHHHHHHHHHHHHHHHHHhhcccCCccHHHHH
Confidence            88  4443333323333455 455899999999999 9999999999999999999999999999876444578999999


Q ss_pred             HHHHHHHHHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHh-hcccc----cccccccccccchhhHHHHHHHHhhh
Q 036575          195 HFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYEL-LGTFN----WSDHFPVLSWFDLQGVRKRCRKLVGK  269 (528)
Q Consensus       195 ~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~P~l~~~~~~~~~~~~~~~~~~  269 (528)
                      .++|+|+|++++||.+.++..       +...++.......+.. .....    ....+|.+...  ........+..+.
T Consensus       177 ~~yT~DVI~~~AfG~~~~s~~-------d~~~~F~~~~~~~~~~~~~~~~l~~~~~~~~p~l~~~--l~~~~~~~~~~~~  247 (499)
T KOG0158|consen  177 ARYTTDVIGSCAFGLDANSLR-------DPKAEFRRMGRRAFFLSRGLFPLKFMLIFLFPKLALP--LRVKLFPEDVTDF  247 (499)
T ss_pred             HHHHHHHHhHhhcccchhhhc-------CchHHHHHhhHHHHHHhhccchHhHhHHHHhHHHHHh--hhcccChHHHHHH
Confidence            999999999999999988766       2333555544444333 11111    11122222111  0011112233334


Q ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCCC-------C-CCCHHHHHHHHHHHHHhhccchHHHHHH
Q 036575          270 VNSFVSKIIEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDGE-------N-RLTDSDMIAVLWEMIFRGTDTVAILLEW  341 (528)
Q Consensus       270 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-------~-~l~~~ei~~~~~~~~~Ag~dtt~~~l~~  341 (528)
                      +.+.+...++.|.++.           ..+.|+++.+++...+       . .+|.+||+++++.|++||.||||+++++
T Consensus       248 ~~~~v~~~v~~R~~~~-----------~~r~Dfi~lll~~~~~~~~~~~~~~~lt~dei~aQafvFl~AGfeTts~tlsf  316 (499)
T KOG0158|consen  248 FRKLVNSRVEQREKEN-----------IERNDFIDLLLDARASDFAKSKSHKALTDDEIAAQAFVFLLAGFETTASTLSF  316 (499)
T ss_pred             HHHHHHHHHHHHHhcC-----------CCCchHHHHHHHhhcccccccccccccCHHHHHHHHHHHHHhhhHhHHHHHHH
Confidence            4444445555441111           5789999999987642       1 4999999999999999999999999999


Q ss_pred             HHHHHhhChHHHHHHHHHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeec-ceeeCCCCE
Q 036575          342 ILARMVLHPDIQAKAQIEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVG-QHLVPAGTT  420 (528)
Q Consensus       342 ~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~-g~~Ip~g~~  420 (528)
                      ++|+||+||++|+|||+||+++..+...+|+|.+.+|+||++||+||||+||+++.+  .|.|++|++++ ++.||||+.
T Consensus       317 ~lYeLA~~PdvQ~kLreEI~~~~~~~~~ltyd~l~~L~YLd~Vi~ETLR~yP~~~~~--~R~C~k~~~i~~~~~i~kG~~  394 (499)
T KOG0158|consen  317 ALYELAKNPDVQDKLREEIDEVLEEKEGLTYDSLSKLKYLDMVIKETLRLYPPAPFL--NRECTKDYEIPGGFVIPKGTP  394 (499)
T ss_pred             HHHHHhcChHHHHHHHHHHHHHhcccCCCCHHHHhCCcHHHHHHHHHHhhCCCcccc--cceecCceecCCCeEeCCCCE
Confidence            999999999999999999999976544499999999999999999999999999986  89999999999 999999999


Q ss_pred             EEEeccccccCCCCCCCCCCCCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCC
Q 036575          421 AMVNMWSITHDEEVWPEANEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGG  500 (528)
Q Consensus       421 v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~  500 (528)
                      |.++++++||||++||||++|+||||.+++... .++..|+|||.|||+|+|++||.+|+|+.|++||++|+++..+.. 
T Consensus       395 V~Ip~~alH~Dp~~~p~Pe~F~PERF~~~~~~~-~~~~~ylPFG~GPR~CIGmRfa~mq~K~~L~~lL~~f~~~~~~~t-  472 (499)
T KOG0158|consen  395 VMIPTYALHHDPEYWPEPEKFKPERFEEENNKS-RHPGAYLPFGVGPRNCIGMRFALMEAKLALAHLLRNFSFEVCPTT-  472 (499)
T ss_pred             EEeecccccCCcccCCCcccCCCccCCCCcccc-cCCccccCCCCCccccHHHHHHHHHHHHHHHHHHhhCEEecCCcc-
Confidence            999999999999999999999999999876442 267789999999999999999999999999999999999988733 


Q ss_pred             cCCcccc---cceeeccCceeEEeeecc
Q 036575          501 VDLSECL---KLSLEMKNSLVCKAVPRF  525 (528)
Q Consensus       501 ~~~~~~~---~~~~~~~~~~~~~~~~r~  525 (528)
                      .+. ...   ++++.|.+++++++++|+
T Consensus       473 ~~~-~~~~~~~~~l~pk~gi~Lkl~~r~  499 (499)
T KOG0158|consen  473 IIP-LEGDPKGFTLSPKGGIWLKLEPRD  499 (499)
T ss_pred             cCc-ccCCccceeeecCCceEEEEEeCC
Confidence            222 444   788899999999999985


No 3  
>PLN02971 tryptophan N-hydroxylase
Probab=100.00  E-value=9.9e-79  Score=612.59  Aligned_cols=466  Identities=28%  Similarity=0.462  Sum_probs=367.5

Q ss_pred             CCCCCCCCCCCcccccchhhcCCc-hHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCcccc
Q 036575           48 TRTAIPGPSGLPILGMVLAFTGSL-THRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKES  124 (528)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~~~-~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~  124 (528)
                      +.+.||||+++|++||++++..+. .+..+.+|.++|| +++|++++|+.++|+|+||+++++++.+  ..|.+|+....
T Consensus        55 ~~~lPPGP~~lPiiGnl~~l~~~~~~~~~l~~~~~~yg-~~i~~~~~G~~~~vvv~dpe~ikevl~~~~~~f~~rp~~~~  133 (543)
T PLN02971         55 LHPLPPGPTGFPIVGMIPAMLKNRPVFRWLHSLMKELN-TEIACVRLGNTHVIPVTCPKIAREIFKQQDALFASRPLTYA  133 (543)
T ss_pred             CCCCCcCCCCCCcccchHHhccCCcHhHHHHHHHHHhC-CceEEEEcCCcceEEECCHHHHHHHHHhcchhhcCCCcccc
Confidence            467899999999999999885432 4678999999993 3899999999999999999999999985  56888875332


Q ss_pred             chheecc-ceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHH
Q 036575          125 AYELLFH-RAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVM  203 (528)
Q Consensus       125 ~~~~~~g-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~  203 (528)
                      ......| .+.++..+|+.|+++|+.+..+++++..++.+.+.++++++.+++.+.+...+++++|+.+.+.++++++++
T Consensus       134 ~~~l~~~~~~~l~~~~G~~Wk~~Rk~l~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi~  213 (543)
T PLN02971        134 QKILSNGYKTCVITPFGEQFKKMRKVIMTEIVCPARHRWLHDNRAEETDHLTAWLYNMVKNSEPVDLRFVTRHYCGNAIK  213 (543)
T ss_pred             hhhccCCCCceEecCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceehHHHHHHHHHHHHH
Confidence            2111111 234567789999999999966778887788889999999999998887654455689999999999999999


Q ss_pred             HHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhc---ccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHH
Q 036575          204 MSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLG---TFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEE  280 (528)
Q Consensus       204 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  280 (528)
                      +++||.++...+..  .+++...+....+...+....   ...+.+.+|++.+++.....+...+..+.+.+++...+++
T Consensus       214 ~~~fG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  291 (543)
T PLN02971        214 RLMFGTRTFSEKTE--PDGGPTLEDIEHMDAMFEGLGFTFAFCISDYLPMLTGLDLNGHEKIMRESSAIMDKYHDPIIDE  291 (543)
T ss_pred             HHHhCCcccccccc--cccchhHHHHHHHHHHHHHHHhccCCcHHHhCCchhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence            99999887422100  000111133333444433221   1223456676665522223344555667788888999988


Q ss_pred             HHHHhhhcccCCCCCCCCCCcHHHHHhhcCCCC---CCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHH
Q 036575          281 HKVKRINKNINGGCCDVDEGDFVDVLLGLDGEN---RLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQ  357 (528)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~  357 (528)
                      +++....+.      .....|+++.|++..+++   .++++++.+++.++++||+|||+++++|++++|++||++|+|+|
T Consensus       292 ~~~~~~~~~------~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~l~~AG~dTTa~tl~~~l~~La~~Pevq~kl~  365 (543)
T PLN02971        292 RIKMWREGK------RTQIEDFLDIFISIKDEAGQPLLTADEIKPTIKELVMAAPDNPSNAVEWAMAEMINKPEILHKAM  365 (543)
T ss_pred             HHHHHhccC------CCCCcCHHHHHHhhhcccCCCCCCHHHHHHhHHHHheeccchHHHHHHHHHHHHHhCHHHHHHHH
Confidence            775432110      023469999999854322   49999999999999999999999999999999999999999999


Q ss_pred             HHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCCCC
Q 036575          358 IEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVWPE  437 (528)
Q Consensus       358 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~~~  437 (528)
                      +||++++++++.++++++++|||++|||+|+||++|++|... +|.+.+|++++||.||||+.|.++.|++||||++|+|
T Consensus       366 ~EI~~v~g~~~~~t~~d~~~LpYl~avi~E~lRl~p~~~~~~-~r~~~~d~~~~G~~IpkGt~v~~~~~~~~~d~~~~~d  444 (543)
T PLN02971        366 EEIDRVVGKERFVQESDIPKLNYVKAIIREAFRLHPVAAFNL-PHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSD  444 (543)
T ss_pred             HHHHHHhCCCCCCCHHHhccCHHHHHHHHHHHhcCCCcccCc-ceecCCCeeECCEEECCCCEEEECcHHhcCChhhCCC
Confidence            999999987788999999999999999999999999999743 8999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCccccc--CCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCC-CcCCcccccceeecc
Q 036575          438 ANEFKPERFLYEDVNI--MGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAG-GVDLSECLKLSLEMK  514 (528)
Q Consensus       438 p~~F~P~R~l~~~~~~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~~~~~~~  514 (528)
                      |++|+||||++++.+.  ...+..++|||+|+|.|+|++||++|+++++++|+++|++++.++. ++++....+ ++.-+
T Consensus       445 P~~F~PeRfl~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~-~~~~~  523 (543)
T PLN02971        445 PLSFKPERHLNECSEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSH-DMFLS  523 (543)
T ss_pred             ccccCcccCCCCCccccccCCCCccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCEEEeCCCCCCcchhhhcC-ccccc
Confidence            9999999999754221  1234679999999999999999999999999999999999987654 566666666 55445


Q ss_pred             CceeEEeeec
Q 036575          515 NSLVCKAVPR  524 (528)
Q Consensus       515 ~~~~~~~~~r  524 (528)
                      +++.+.+++|
T Consensus       524 ~~~~~~~~~~  533 (543)
T PLN02971        524 KPLVMVGELR  533 (543)
T ss_pred             ccceeeeeec
Confidence            7899999999


No 4  
>PLN02687 flavonoid 3'-monooxygenase
Probab=100.00  E-value=3.7e-78  Score=606.75  Aligned_cols=469  Identities=34%  Similarity=0.641  Sum_probs=378.8

Q ss_pred             hhhccccCCCCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccC
Q 036575           40 YKSRFSTQTRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFA  117 (528)
Q Consensus        40 ~~~~~~~~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~  117 (528)
                      ++.+.+++..+.||||+++|++||++.+..+ ++..+.+|+++|  |++|++++|+.++|+++||+++++++.+  ..|.
T Consensus        24 ~~~~~~~~~~~~pPgp~~~P~iG~~~~~~~~-~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~~p~~~~~il~~~~~~f~  100 (517)
T PLN02687         24 RRGGSGKHKRPLPPGPRGWPVLGNLPQLGPK-PHHTMAALAKTY--GPLFRLRFGFVDVVVAASASVAAQFLRTHDANFS  100 (517)
T ss_pred             ccccCCCCCCCCCccCCCCCccccHHhcCCc-hhHHHHHHHHHh--CCeeEEecCCceEEEeCCHHHHHHHHHhcchhhh
Confidence            4444455556789999999999999988766 899999999999  8999999999999999999999999985  5788


Q ss_pred             CCCccccchhee-ccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHH
Q 036575          118 DRPVKESAYELL-FHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHF  196 (528)
Q Consensus       118 ~~~~~~~~~~~~-~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~  196 (528)
                      +++......... .+.+.+++.+|+.|+++|+.+..+.|+.++++.+.+.++++++++++.|.+.. +++++|+.++++.
T Consensus       101 ~r~~~~~~~~~~~~~~~~l~~~~g~~Wk~~Rr~l~~~~fs~~~l~~~~~~i~~~~~~l~~~l~~~~-~~~~vd~~~~~~~  179 (517)
T PLN02687        101 NRPPNSGAEHMAYNYQDLVFAPYGPRWRALRKICAVHLFSAKALDDFRHVREEEVALLVRELARQH-GTAPVNLGQLVNV  179 (517)
T ss_pred             cCCCccchhhhccCCceeEeCCCCHHHHHHHHHHHHHhCCHHHHHHhHHHHHHHHHHHHHHHHHhc-CCCceeHHHHHHH
Confidence            776543322211 13455677789999999999943899999999999999999999999997653 4568999999999


Q ss_pred             HHHHHHHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHH
Q 036575          197 GSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSK  276 (528)
Q Consensus       197 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~  276 (528)
                      +++|+++.++||.++...+.     ......+.+.+.............+.+|++.+++.....++..+..+.+.+++.+
T Consensus       180 ~t~dvi~~~~fG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~l~~~~~~~~~~~~~~~~~~~~~~  254 (517)
T PLN02687        180 CTTNALGRAMVGRRVFAGDG-----DEKAREFKEMVVELMQLAGVFNVGDFVPALRWLDLQGVVGKMKRLHRRFDAMMNG  254 (517)
T ss_pred             HHHHHHHHHHhCccccccCC-----cchHHHHHHHHHHHHHHhccCcHHHHhhhHHHhCcccHHHHHHHHHHHHHHHHHH
Confidence            99999999999998764331     0011256666666555433333335667666553223345556667788889999


Q ss_pred             HHHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCC-------CCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhC
Q 036575          277 IIEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDG-------ENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLH  349 (528)
Q Consensus       277 ~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-------~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~  349 (528)
                      .++++++.....       +....|+++.+++...       +..++++++.+++.++++||+|||+++++|++|+|++|
T Consensus       255 ~i~~r~~~~~~~-------~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~eTta~~l~~~l~~L~~~  327 (517)
T PLN02687        255 IIEEHKAAGQTG-------SEEHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRH  327 (517)
T ss_pred             HHHHHHHhcccc-------CcccccHHHHHHHhhccccccccccCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHhC
Confidence            999887653210       1345699999997532       23599999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccc
Q 036575          350 PDIQAKAQIEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSIT  429 (528)
Q Consensus       350 p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~  429 (528)
                      |++|+|+++|++++++.++.++++++++||||+|||+|+||++|+++... +|.+.+|++++||.||+|+.|.++.+++|
T Consensus       328 P~~~~kl~~Ei~~~~~~~~~~~~~~l~~lpyl~a~i~EtlRl~p~~~~~~-~R~~~~d~~~~g~~ip~Gt~v~~~~~~~h  406 (517)
T PLN02687        328 PDILKKAQEELDAVVGRDRLVSESDLPQLTYLQAVIKETFRLHPSTPLSL-PRMAAEECEINGYHIPKGATLLVNVWAIA  406 (517)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCHHHhhhCHHHHHHHHHHHccCCCccccc-cccCCCCeeECCEEECCCCEEEEecHHhc
Confidence            99999999999999987778899999999999999999999999999742 89999999999999999999999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCccccc----CCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCC---cC
Q 036575          430 HDEEVWPEANEFKPERFLYEDVNI----MGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGG---VD  502 (528)
Q Consensus       430 ~d~~~~~~p~~F~P~R~l~~~~~~----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~  502 (528)
                      |||++|+||++|+||||++++...    ...+..++|||+|+|.|+|++||++|+++++++|+++|++++.++..   ++
T Consensus       407 ~d~~~~~dp~~F~PeRfl~~~~~~~~~~~~~~~~~~pFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~  486 (517)
T PLN02687        407 RDPEQWPDPLEFRPDRFLPGGEHAGVDVKGSDFELIPFGAGRRICAGLSWGLRMVTLLTATLVHAFDWELADGQTPDKLN  486 (517)
T ss_pred             CCcccCCCcccCCchhcCCCCCccccccCCCceeeCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcceecCCCCCcccCC
Confidence            999999999999999999743211    11345799999999999999999999999999999999999876532   22


Q ss_pred             CcccccceeeccCceeEEeeecc
Q 036575          503 LSECLKLSLEMKNSLVCKAVPRF  525 (528)
Q Consensus       503 ~~~~~~~~~~~~~~~~~~~~~r~  525 (528)
                      .....+++..+..++.+++++|.
T Consensus       487 ~~~~~~~~~~~~~~~~~~~~~R~  509 (517)
T PLN02687        487 MEEAYGLTLQRAVPLMVHPRPRL  509 (517)
T ss_pred             cccccceeeecCCCeEEeeccCC
Confidence            33345666666678899888884


No 5  
>PLN00110 flavonoid 3',5'-hydroxylase (F3'5'H); Provisional
Probab=100.00  E-value=3.8e-78  Score=602.78  Aligned_cols=461  Identities=32%  Similarity=0.599  Sum_probs=376.9

Q ss_pred             CCCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccccc
Q 036575           48 TRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKESA  125 (528)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~~  125 (528)
                      ..+.||||+++|++||++.+... ++..+.+|+++|  |++|++++|+.++|+|+||+++++++.+  ..|++++.....
T Consensus        29 ~~~~pPgp~~~Pl~G~l~~~~~~-~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~dpe~~~~vl~~~~~~f~~r~~~~~~  105 (504)
T PLN00110         29 SRKLPPGPRGWPLLGALPLLGNM-PHVALAKMAKRY--GPVMFLKMGTNSMVVASTPEAARAFLKTLDINFSNRPPNAGA  105 (504)
T ss_pred             cCCCcccCCCCCeeechhhcCCc-hHHHHHHHHHHh--CCeEEEEcCCccEEEECCHHHHHHHHHhcchhhcCCCCccch
Confidence            45679999999999999888655 889999999999  8999999999999999999999999985  567877754433


Q ss_pred             hheecc-ceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHHH
Q 036575          126 YELLFH-RAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMM  204 (528)
Q Consensus       126 ~~~~~g-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  204 (528)
                      .....+ .+.+++.+|+.|+++|+.+..+.|++++++.+.+.+.+.+.++++.+.+...+++++|+.+++..+++|+|+.
T Consensus       106 ~~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~i~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~vi~~  185 (504)
T PLN00110        106 THLAYGAQDMVFADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQRGEPVVVPEMLTFSMANMIGQ  185 (504)
T ss_pred             hhhccCCCceeeCCCCHHHHHHHHHHHHHhCCHHHHHHhhHHHHHHHHHHHHHHHHhccCCCcEeHHHHHHHHHHHHHHH
Confidence            222333 3444666899999999999446899999999999999999999999977655667899999999999999999


Q ss_pred             HHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 036575          205 SVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEEHKVK  284 (528)
Q Consensus       205 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  284 (528)
                      ++||.++.....      ....++..++...........+.+.+|++.|++.....++..+..+.+.+++.+.++++++.
T Consensus       186 ~~fg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  259 (504)
T PLN00110        186 VILSRRVFETKG------SESNEFKDMVVELMTTAGYFNIGDFIPSIAWMDIQGIERGMKHLHKKFDKLLTRMIEEHTAS  259 (504)
T ss_pred             HHhCCcccccCc------hhHHHHHHHHHHHHHHhccccHHHHcchHhhhCcchHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            999987621110      11125666666665544333344567776665322334555666777888888888877654


Q ss_pred             hhhcccCCCCCCCCCCcHHHHHhhcCC---CCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHh
Q 036575          285 RINKNINGGCCDVDEGDFVDVLLGLDG---ENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEID  361 (528)
Q Consensus       285 ~~~~~~~~~~~~~~~~d~l~~ll~~~~---~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~  361 (528)
                      ...        +....|+++.+++...   +.+++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++
T Consensus       260 ~~~--------~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~~~~kl~~Ei~  331 (504)
T PLN00110        260 AHE--------RKGNPDFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMD  331 (504)
T ss_pred             ccc--------cccCCChhhHHhhcccccCCCCCCHHHHHHHHHhhhcccccchHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            320        0234689999997532   23699999999999999999999999999999999999999999999999


Q ss_pred             HhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCCCCCCCC
Q 036575          362 NTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVWPEANEF  441 (528)
Q Consensus       362 ~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F  441 (528)
                      ++++.+..++++++++|||++|||+||||++|+++... +|.+.+|++++||.||||+.|.++.+++||||++|+||++|
T Consensus       332 ~~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~-~R~~~~d~~~~g~~Ip~Gt~V~~~~~~~h~d~~~~~dP~~F  410 (504)
T PLN00110        332 QVIGRNRRLVESDLPKLPYLQAICKESFRKHPSTPLNL-PRVSTQACEVNGYYIPKNTRLSVNIWAIGRDPDVWENPEEF  410 (504)
T ss_pred             HHhCCCCCCCHHHhhcChHHHHHHHHHhcCCCCccccc-ccccCCCeeeCCEEECCCCEEEEeHHHhcCChhhcCCcccC
Confidence            99987677899999999999999999999999999742 89999999999999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCC---CCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccCcee
Q 036575          442 KPERFLYEDVNIMG---SNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKNSLV  518 (528)
Q Consensus       442 ~P~R~l~~~~~~~~---~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (528)
                      +||||++++.....   +...++|||+|+|.|+|++||++|+++++++|+++|++++.++.+.+.....++++.|+.++.
T Consensus       411 ~PeRfl~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  490 (504)
T PLN00110        411 RPERFLSEKNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGTLVHSFDWKLPDGVELNMDEAFGLALQKAVPLS  490 (504)
T ss_pred             CcccccCCCCcccccCCCeeeEeCCCCCCCCCCcHHHHHHHHHHHHHHHHHhceeecCCCCccCcccccccccccCCCce
Confidence            99999975422111   234799999999999999999999999999999999999887755444445678888989999


Q ss_pred             EEeeeccC
Q 036575          519 CKAVPRFF  526 (528)
Q Consensus       519 ~~~~~r~~  526 (528)
                      +++++|.+
T Consensus       491 ~~~~~r~~  498 (504)
T PLN00110        491 AMVTPRLH  498 (504)
T ss_pred             EeeccCCC
Confidence            99999953


No 6  
>PLN03234 cytochrome P450 83B1; Provisional
Probab=100.00  E-value=2.7e-78  Score=607.41  Aligned_cols=459  Identities=30%  Similarity=0.567  Sum_probs=373.6

Q ss_pred             CCCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccccc
Q 036575           48 TRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKESA  125 (528)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~~  125 (528)
                      +.+.||||+++|++||++.+....++.++.+|+++|  |++|++++|+.++|+++|||++++|+.+  ..|.+++.....
T Consensus        26 ~~~~pPgp~~~P~iG~~~~~~~~~~~~~~~~~~~~y--G~~~~~~lg~~~~vvv~dpe~~~~il~~~~~~f~~r~~~~~~  103 (499)
T PLN03234         26 SLRLPPGPKGLPIIGNLHQMEKFNPQHFLFRLSKLY--GPIFTMKIGGRRLAVISSAELAKELLKTQDLNFTARPLLKGQ  103 (499)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCCCccHHHHHHHHHc--CCeEEEEecCcCEEEECCHHHHHHHHHhCCccccCCCCchhh
Confidence            467899999999999999886533788999999999  8999999999999999999999999985  568887754433


Q ss_pred             hh-eeccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHHH
Q 036575          126 YE-LLFHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMM  204 (528)
Q Consensus       126 ~~-~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  204 (528)
                      .. ...+.++.+...++.|+++|+.+..+.|++++++.+.+.+++.++++++.|.+...+++++|+.+.+..+++|+++.
T Consensus       104 ~~~~~~~~~~~~~~~~~~w~~~Rr~l~~~~f~~~~l~~~~~~i~~~~~~ll~~l~~~~~~~~~vd~~~~~~~~t~dvi~~  183 (499)
T PLN03234        104 QTMSYQGRELGFGQYTAYYREMRKMCMVNLFSPNRVASFRPVREEECQRMMDKIYKAADQSGTVDLSELLLSFTNCVVCR  183 (499)
T ss_pred             hhhccCCCccccCCCcHHHHHHHHHHHHHhcCHHHHHHhHHHHHHHHHHHHHHHHHhccCCCeEEHHHHHHHHHHHHHHH
Confidence            22 22344555556789999999985478999999999999999999999999987665677899999999999999999


Q ss_pred             HHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccc-hhhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 036575          205 SVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFD-LQGVRKRCRKLVGKVNSFVSKIIEEHKV  283 (528)
Q Consensus       205 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~  283 (528)
                      ++||.+++..+       ....++.+.+.+...........+.+|++.++. .....++..++.+.+.+++.+.|+++++
T Consensus       184 ~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~  256 (499)
T PLN03234        184 QAFGKRYNEYG-------TEMKRFIDILYETQALLGTLFFSDLFPYFGFLDNLTGLSARLKKAFKELDTYLQELLDETLD  256 (499)
T ss_pred             HHhCCcccccc-------hhHHHHHHHHHHHHHHcCCCcHHHHhhHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99998876433       111255555555544433333444556544331 1233456778888999999999988764


Q ss_pred             HhhhcccCCCCCCCCCCcHHHHHhhcCCC----CCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHH
Q 036575          284 KRINKNINGGCCDVDEGDFVDVLLGLDGE----NRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIE  359 (528)
Q Consensus       284 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~----~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~E  359 (528)
                      ....        +....|+++.+++..++    ..++++++.+++.++++||+|||+++++|++|+|++||++|+|+|+|
T Consensus       257 ~~~~--------~~~~~d~l~~l~~~~~~~~~~~~~~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~v~~kl~~E  328 (499)
T PLN03234        257 PNRP--------KQETESFIDLLMQIYKDQPFSIKFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDE  328 (499)
T ss_pred             hccc--------CCCcccHHHHHHHHhhccCcCCCCCHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            3210        02456899988865332    25899999999999999999999999999999999999999999999


Q ss_pred             HhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCC-CCC
Q 036575          360 IDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVW-PEA  438 (528)
Q Consensus       360 i~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~-~~p  438 (528)
                      +++++++.+.++++++++|||++|||+|+||++|+++... +|.+.+|++++||.|||||.|.++.+++||||++| +||
T Consensus       329 i~~~~~~~~~~~~~~l~~l~yl~avi~E~lRl~p~~~~~~-~R~~~~d~~~~g~~IP~Gt~v~~~~~~~~rd~~~~~~~P  407 (499)
T PLN03234        329 VRNVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILL-HRETIADAKIGGYDIPAKTIIQVNAWAVSRDTAAWGDNP  407 (499)
T ss_pred             HHHHhCCCCCCCHHHHhcChHHHHHHHHHhccCCCccccC-CcccCCCeeECCEEECCCCEEEEehHhhhCCcccccCCh
Confidence            9999987777899999999999999999999999999753 79999999999999999999999999999999999 899


Q ss_pred             CCCCCCCCCCcccc--cCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCC---CcCCcccccceeec
Q 036575          439 NEFKPERFLYEDVN--IMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAG---GVDLSECLKLSLEM  513 (528)
Q Consensus       439 ~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~~~~~~~~~~~~  513 (528)
                      ++|+||||++++..  ....+..++|||.|+|+|+|+++|++|+++++++|+++|++++.++.   .+.....+|++..|
T Consensus       408 ~~F~PeR~l~~~~~~~~~~~~~~~~pFG~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~  487 (499)
T PLN03234        408 NEFIPERFMKEHKGVDFKGQDFELLPFGSGRRMCPAMHLGIAMVEIPFANLLYKFDWSLPKGIKPEDIKMDVMTGLAMHK  487 (499)
T ss_pred             hhcCchhhcCCCCCcCcCCCcceEeCCCCCCCCCCChHHHHHHHHHHHHHHHHheeeeCCCCCCCCCCCccccccccccc
Confidence            99999999975432  11235679999999999999999999999999999999999987652   34445577888778


Q ss_pred             cCceeEEeeec
Q 036575          514 KNSLVCKAVPR  524 (528)
Q Consensus       514 ~~~~~~~~~~r  524 (528)
                      ++++.+..++|
T Consensus       488 ~~~~~~~~~~~  498 (499)
T PLN03234        488 KEHLVLAPTKH  498 (499)
T ss_pred             CCCeEEEeecC
Confidence            77766666554


No 7  
>PTZ00404 cytochrome P450; Provisional
Probab=100.00  E-value=4.1e-78  Score=603.36  Aligned_cols=454  Identities=24%  Similarity=0.362  Sum_probs=363.5

Q ss_pred             cCCCCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccc
Q 036575           46 TQTRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKE  123 (528)
Q Consensus        46 ~~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~  123 (528)
                      +...+.+|||+++|++||++.+..+ ++..+.+|+++|  |++|++++|+.++|+++||+++++|+.+  ..|.+++...
T Consensus        25 ~~~~~~~pgp~~~p~~G~~~~~~~~-~~~~~~~~~~~y--G~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~r~~~~  101 (482)
T PTZ00404         25 KIHKNELKGPIPIPILGNLHQLGNL-PHRDLTKMSKKY--GGIFRIWFADLYTVVLSDPILIREMFVDNFDNFSDRPKIP  101 (482)
T ss_pred             hccCCCCCCCCCCCeeccHhhhccc-HHHHHHHHHHHh--CCeeEEEecCCCEEEECCHHHHHHHHHhcchhhcCCCCcc
Confidence            4457889999999999999988765 899999999999  8999999999999999999999999985  4577776554


Q ss_pred             cchheeccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHH
Q 036575          124 SAYELLFHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVM  203 (528)
Q Consensus       124 ~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~  203 (528)
                      ......++.+++. .+|+.|+++|+.+ .+.|++.+++.+.+.+.+.++++++.|.+..++++.+|+.+++.++++|+++
T Consensus       102 ~~~~~~~~~~l~~-~~g~~w~~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~  179 (482)
T PTZ00404        102 SIKHGTFYHGIVT-SSGEYWKRNREIV-GKAMRKTNLKHIYDLLDDQVDVLIESMKKIESSGETFEPRYYLTKFTMSAMF  179 (482)
T ss_pred             eeeeeccCCceec-cChHHHHHHHHHH-HHHHhhhccccHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHH
Confidence            3333334677754 4899999999999 8999999999999999999999999998765556779999999999999999


Q ss_pred             HHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 036575          204 MSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEEHKV  283 (528)
Q Consensus       204 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  283 (528)
                      .++||.+++..+..   ..+....+.+.+...+.........+.++++... .........+..+.+.+++.+.++++++
T Consensus       180 ~~~fG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~  255 (482)
T PTZ00404        180 KYIFNEDISFDEDI---HNGKLAELMGPMEQVFKDLGSGSLFDVIEITQPL-YYQYLEHTDKNFKKIKKFIKEKYHEHLK  255 (482)
T ss_pred             HHHhcccccccccc---chhHHHHHHHHHHHHHHHhCCCchhhhhhHhhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999987643210   0000125555666655544333222223332221 1111222334556677777777666554


Q ss_pred             HhhhcccCCCCCCCCCCcHHHHHhhcCCC-CCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHhH
Q 036575          284 KRINKNINGGCCDVDEGDFVDVLLGLDGE-NRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEIDN  362 (528)
Q Consensus       284 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~~  362 (528)
                      ..+         +....|+++.++++..+ .....+++.+++.++++||+|||+++++|++|+|++||++|+|+++|+++
T Consensus       256 ~~~---------~~~~~dll~~ll~~~~~~~~~~~~~i~~~~~~~~~AG~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~  326 (482)
T PTZ00404        256 TID---------PEVPRDLLDLLIKEYGTNTDDDILSILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKS  326 (482)
T ss_pred             ccC---------CCCcccHHHHHHHHhccCCcccHHHHHHHHHHHHHhccchHHHHHHHHHHHHHcCcHHHHHHHHHHHH
Confidence            321         02357899999986432 12223358899999999999999999999999999999999999999999


Q ss_pred             hhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeee-cceeeCCCCEEEEeccccccCCCCCCCCCCC
Q 036575          363 TVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQV-GQHLVPAGTTAMVNMWSITHDEEVWPEANEF  441 (528)
Q Consensus       363 ~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l-~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F  441 (528)
                      +++++..++++++++|||++|||+||||++|++|... +|.+.+|+++ +||.||||+.|.++.+++||||++||||++|
T Consensus       327 v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~~~~~-~R~~~~d~~l~~g~~Ip~Gt~V~~~~~a~hrdp~~~~dP~~F  405 (482)
T PTZ00404        327 TVNGRNKVLLSDRQSTPYTVAIIKETLRYKPVSPFGL-PRSTSNDIIIGGGHFIPKDAQILINYYSLGRNEKYFENPEQF  405 (482)
T ss_pred             HhcCCCCCCccccccChHHHHHHHHHHHhcCCccccc-ceeccCCEEecCCeEECCCCEEEeeHHHhhCCccccCCcccc
Confidence            9987667899999999999999999999999999632 8999999999 9999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccCceeEEe
Q 036575          442 KPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKNSLVCKA  521 (528)
Q Consensus       442 ~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  521 (528)
                      +||||+++.     .+..++|||+|+|.|+|++||++|+++++++|+++|++++.+++++......+++++ +.++.+++
T Consensus       406 ~PeRwl~~~-----~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~  479 (482)
T PTZ00404        406 DPSRFLNPD-----SNDAFMPFSIGPRNCVGQQFAQDELYLAFSNIILNFKLKSIDGKKIDETEEYGLTLK-PNKFKVLL  479 (482)
T ss_pred             CccccCCCC-----CCCceeccCCCCCCCccHHHHHHHHHHHHHHHHHhcEEecCCCCCCCcccccceeec-CCCceeee
Confidence            999999742     456899999999999999999999999999999999999877655444445677776 46799999


Q ss_pred             eec
Q 036575          522 VPR  524 (528)
Q Consensus       522 ~~r  524 (528)
                      ++|
T Consensus       480 ~~R  482 (482)
T PTZ00404        480 EKR  482 (482)
T ss_pred             ecC
Confidence            887


No 8  
>PLN02183 ferulate 5-hydroxylase
Probab=100.00  E-value=9.4e-78  Score=603.65  Aligned_cols=458  Identities=34%  Similarity=0.608  Sum_probs=364.5

Q ss_pred             CCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccccch
Q 036575           49 RTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKESAY  126 (528)
Q Consensus        49 ~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~~~  126 (528)
                      .+.||||+++|++||++.+... .+..+.+|+++|  |++|++++|+.++|+|+||+++++|+.+  ..|++++......
T Consensus        35 ~~~ppgp~~~Pl~G~l~~~~~~-~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~  111 (516)
T PLN02183         35 LPYPPGPKGLPIIGNMLMMDQL-THRGLANLAKQY--GGLFHMRMGYLHMVAVSSPEVARQVLQVQDSVFSNRPANIAIS  111 (516)
T ss_pred             CCCCcCCCCCCeeccHHhcCCc-chHHHHHHHHHh--CCeeEEEeCCcceEEeCCHHHHHHHHHhhhhhhcCCCcccchh
Confidence            5789999999999999887554 678899999999  8999999999999999999999999985  5577776432222


Q ss_pred             heecc-ceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHHHH
Q 036575          127 ELLFH-RAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMMS  205 (528)
Q Consensus       127 ~~~~g-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~  205 (528)
                      ....+ .+.+++.+|+.|+++|+++..++|+.+.++.+.+.+ +.++.+++.+...  .++++|+.+++.++++|+++.+
T Consensus       112 ~~~~~~~~~l~~~~g~~w~~~Rr~~~~~~f~~~~l~~~~~~~-~~~~~~~~~l~~~--~~~~v~~~~~~~~~~~~vi~~~  188 (516)
T PLN02183        112 YLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWASVR-DEVDSMVRSVSSN--IGKPVNIGELIFTLTRNITYRA  188 (516)
T ss_pred             ccccCCCceEeCCCChHHHHHHHHHHHHhcCHHHHHHHHHHH-HHHHHHHHHHHhc--CCCcEeHHHHHHHHHHHHHHhH
Confidence            22221 334466689999999998547899999999998864 6789999998642  4668999999999999999999


Q ss_pred             HHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 036575          206 VFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEEHKVKR  285 (528)
Q Consensus       206 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  285 (528)
                      +||.+.+...          .++.+.+...............+|++.++.+....++..+..+.+.+++.+.+++++++.
T Consensus       189 ~fG~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  258 (516)
T PLN02183        189 AFGSSSNEGQ----------DEFIKILQEFSKLFGAFNVADFIPWLGWIDPQGLNKRLVKARKSLDGFIDDIIDDHIQKR  258 (516)
T ss_pred             hhcCcccchH----------HHHHHHHHHHHHHhCCccHHHhcchhHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            9998764311          256666655555444444455677766553233445666777888888988888876543


Q ss_pred             hhcccCCCCCCCCCCcHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHH
Q 036575          286 INKNINGGCCDVDEGDFVDVLLGLDG-------------ENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDI  352 (528)
Q Consensus       286 ~~~~~~~~~~~~~~~d~l~~ll~~~~-------------~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~  352 (528)
                      ....... ..+....|+++.+++...             ...++++++..++.++++||+|||+++++|++|+|++||++
T Consensus       259 ~~~~~~~-~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~La~~Pev  337 (516)
T PLN02183        259 KNQNADN-DSEEAETDMVDDLLAFYSEEAKVNESDDLQNSIKLTRDNIKAIIMDVMFGGTETVASAIEWAMAELMKSPED  337 (516)
T ss_pred             ccccccc-ccccccccHHHHHHHhhhccccccccccccccCCCCHHHHHHHHHHHHHcchhhHHHHHHHHHHHHHhCHHH
Confidence            2111000 011234689999997421             12589999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCC
Q 036575          353 QAKAQIEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDE  432 (528)
Q Consensus       353 q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~  432 (528)
                      |+|+++|++++++.++.++++++++||||+|||+||||++|++|..  .|++.+|++++||.|||||.|.++.+++||||
T Consensus       338 q~kl~~Ei~~v~~~~~~~~~~~l~~L~yl~avi~EtlRl~p~~p~~--~r~~~~d~~l~g~~IPkGt~V~~~~~~~hrd~  415 (516)
T PLN02183        338 LKRVQQELADVVGLNRRVEESDLEKLTYLKCTLKETLRLHPPIPLL--LHETAEDAEVAGYFIPKRSRVMINAWAIGRDK  415 (516)
T ss_pred             HHHHHHHHHHHcCCCCCCCHHHhccChHHHHHHHHHhccCCCccce--eeeccCceeECCEEECCCCEEEEehhhhcCCc
Confidence            9999999999998666789999999999999999999999999987  79999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCccccc-CCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCC---cCCccccc
Q 036575          433 EVWPEANEFKPERFLYEDVNI-MGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGG---VDLSECLK  508 (528)
Q Consensus       433 ~~~~~p~~F~P~R~l~~~~~~-~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~  508 (528)
                      ++|+||++|+||||++++... ..+...++|||+|+|+|+|++||++|+++++|+|+++|++++.++..   ......++
T Consensus       416 ~~~~dP~~F~PeRfl~~~~~~~~~~~~~~lpFG~G~R~CiG~~lA~~e~~l~la~ll~~f~~~~~~~~~~~~~~~~~~~~  495 (516)
T PLN02183        416 NSWEDPDTFKPSRFLKPGVPDFKGSHFEFIPFGSGRRSCPGMQLGLYALDLAVAHLLHCFTWELPDGMKPSELDMNDVFG  495 (516)
T ss_pred             cccCCccccCchhhCCCCCccccCCcceecCCCCCCCCCCChHHHHHHHHHHHHHHHheeEEEcCCCCCCCCCChhhccc
Confidence            999999999999999754321 12345799999999999999999999999999999999999877642   22223446


Q ss_pred             ceeeccCceeEEeeecc
Q 036575          509 LSLEMKNSLVCKAVPRF  525 (528)
Q Consensus       509 ~~~~~~~~~~~~~~~r~  525 (528)
                      .+..+..++.+.+++|-
T Consensus       496 ~~~~~~~~~~~~~~~r~  512 (516)
T PLN02183        496 LTAPRATRLVAVPTYRL  512 (516)
T ss_pred             cccccCCCcEEEeecCC
Confidence            55434457788888773


No 9  
>PLN03112 cytochrome P450 family protein; Provisional
Probab=100.00  E-value=2.3e-77  Score=602.35  Aligned_cols=473  Identities=32%  Similarity=0.576  Sum_probs=379.3

Q ss_pred             hhccccCCCCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCC
Q 036575           41 KSRFSTQTRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFAD  118 (528)
Q Consensus        41 ~~~~~~~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~  118 (528)
                      .++++.++.+.||||+++|++||++++..+ ++..+.+|+++|  |++|++++|+.++|+++||+++++|+.+  +.|++
T Consensus        23 ~~~~~~~~~~~ppgp~~~pl~G~~~~~~~~-~~~~~~~~~~ky--G~v~~~~~g~~~~v~v~dpe~~~~vl~~~~~~f~~   99 (514)
T PLN03112         23 LNASMRKSLRLPPGPPRWPIVGNLLQLGPL-PHRDLASLCKKY--GPLVYLRLGSVDAITTDDPELIREILLRQDDVFAS   99 (514)
T ss_pred             ccccccCCCCCccCCCCCCeeeeHHhcCCc-hHHHHHHHHHHh--CCeEEEEecCccEEEECCHHHHHHHHHhCCccccc
Confidence            334455567889999999999999988655 899999999999  8999999999999999999999999974  56777


Q ss_pred             CCccccchheecc-ceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHH
Q 036575          119 RPVKESAYELLFH-RAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFG  197 (528)
Q Consensus       119 ~~~~~~~~~~~~g-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~  197 (528)
                      ++.........+| .+.+++.+|+.|+.+|+.+..+.|++++++.+.+.+.+.++++++.+.+...+++++|+.+.++++
T Consensus       100 ~~~~~~~~~~~~g~~~~~~~~~g~~wk~~Rr~~~~~~f~~~~l~~~~~~~~~~~~~lv~~l~~~~~~~~~vd~~~~~~~~  179 (514)
T PLN03112        100 RPRTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFAKHRAEEARHLIQDVWEAAQTGKPVNLREVLGAF  179 (514)
T ss_pred             CCCcccceeeccCCCceEeCCCCHHHHHHHHHHHHHhcCHHHHHHhhHHHHHHHHHHHHHHHHhhccCCeeeHHHHHHHH
Confidence            7654333333444 233456689999999999757789999999999999999999999887654456789999999999


Q ss_pred             HHHHHHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHH
Q 036575          198 SLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKI  277 (528)
Q Consensus       198 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~  277 (528)
                      ++++++.++||.++.....   ...+...++.+++...+.........+.+|++.++.+....++..+..+.+.++++..
T Consensus       180 ~~~vi~~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
T PLN03112        180 SMNNVTRMLLGKQYFGAES---AGPKEAMEFMHITHELFRLLGVIYLGDYLPAWRWLDPYGCEKKMREVEKRVDEFHDKI  256 (514)
T ss_pred             HHHHHHHHHcCCccccccc---cchHHHHHHHHHHHHHHHHcCCCcHHHhChHHHhcCcccHHHHHHHHHHHHHHHHHHH
Confidence            9999999999988753221   0000111556666655544333334455676665533334456667778888899999


Q ss_pred             HHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCCC---CCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHH
Q 036575          278 IEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDGE---NRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQA  354 (528)
Q Consensus       278 i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~---~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~  354 (528)
                      ++++++..+...     ......|+++.+++...+   ..++++++.+++.++++||+|||+++++|++|+|++||++|+
T Consensus       257 i~~~~~~~~~~~-----~~~~~~d~l~~ll~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~~l~~~l~~L~~~P~vq~  331 (514)
T PLN03112        257 IDEHRRARSGKL-----PGGKDMDFVDVLLSLPGENGKEHMDDVEIKALMQDMIAAATDTSAVTNEWAMAEVIKNPRVLR  331 (514)
T ss_pred             HHHHHHhhcccc-----cCCccchHHHHHHHhhccccccCCCHHHHHHHHHHHhccccccHHHHHHHHHHHHHhChHHHH
Confidence            988776432110     012346899999985332   248999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCC
Q 036575          355 KAQIEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEV  434 (528)
Q Consensus       355 ~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~  434 (528)
                      |+++|+++++++++.++++++++|||++|||+||+|++|+++... +|.+.+|++++||.||||+.|.++.+++||||++
T Consensus       332 kl~~Ei~~~~~~~~~~t~~~l~~L~yl~avi~EtlRl~p~~~~~~-~R~~~~d~~i~g~~IPkGt~v~~~~~~~h~d~~~  410 (514)
T PLN03112        332 KIQEELDSVVGRNRMVQESDLVHLNYLRCVVRETFRMHPAGPFLI-PHESLRATTINGYYIPAKTRVFINTHGLGRNTKI  410 (514)
T ss_pred             HHHHHHHHhcCCCCcCChhhhccCcHHHHHHHHHhccCCCccccc-ccccCCCeeEcCEEeCCCCEEEEehHHhhCCccc
Confidence            999999999987777999999999999999999999999999742 8999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCcccc--c--CCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCC---CcCCcccc
Q 036575          435 WPEANEFKPERFLYEDVN--I--MGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAG---GVDLSECL  507 (528)
Q Consensus       435 ~~~p~~F~P~R~l~~~~~--~--~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~---~~~~~~~~  507 (528)
                      |+||++|+||||+.+...  .  ...+..++|||.|+|.|+|++||++|+++++++|+++|++++.++.   +.+....+
T Consensus       411 ~~dP~~F~PeRf~~~~~~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~  490 (514)
T PLN03112        411 WDDVEEFRPERHWPAEGSRVEISHGPDFKILPFSAGKRKCPGAPLGVTMVLMALARLFHCFDWSPPDGLRPEDIDTQEVY  490 (514)
T ss_pred             CCChhhcCCcccCCCCCCccccccCCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHheeeecCCCCCcccCCCcccc
Confidence            999999999998753211  1  1134579999999999999999999999999999999999987542   23334455


Q ss_pred             cceeeccCceeEEeeecc
Q 036575          508 KLSLEMKNSLVCKAVPRF  525 (528)
Q Consensus       508 ~~~~~~~~~~~~~~~~r~  525 (528)
                      ++++.+++++.|+++||.
T Consensus       491 ~~~~~~~~~~~~~~~~r~  508 (514)
T PLN03112        491 GMTMPKAKPLRAVATPRL  508 (514)
T ss_pred             CcccccCCCeEEEeecCC
Confidence            777767789999999995


No 10 
>PLN02290 cytokinin trans-hydroxylase
Probab=100.00  E-value=1.1e-77  Score=604.91  Aligned_cols=452  Identities=22%  Similarity=0.346  Sum_probs=362.0

Q ss_pred             ccCCCCCCCCCCCCcccccchhhcCC------------------chHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHH
Q 036575           45 STQTRTAIPGPSGLPILGMVLAFTGS------------------LTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDT  106 (528)
Q Consensus        45 ~~~~~~~~PgP~~~p~~G~~~~~~~~------------------~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~  106 (528)
                      .+...+.||||+++|++||++++...                  +....+.+|+++|  |++|++|+|+.++|+++||++
T Consensus        37 ~~~~~~~~PGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~dp~~  114 (516)
T PLN02290         37 KIMERQGVRGPKPRPLTGNILDVSALVSQSTSKDMDSIHHDIVGRLLPHYVAWSKQY--GKRFIYWNGTEPRLCLTETEL  114 (516)
T ss_pred             HHHHHcCCCCCCCCcCCCCHHHHHHHHHHhhcCCCCCCCcccccccchHHHHHHHHh--CCeEEEccCCccEEEECCHHH
Confidence            33356789999999999999887421                  1233578899999  899999999999999999999


Q ss_pred             HHHHhhc-cccCCCCcccc-chheeccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhc
Q 036575          107 AKEILNS-SAFADRPVKES-AYELLFHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEK  184 (528)
Q Consensus       107 v~~i~~~-~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~  184 (528)
                      +++++.+ ..+..++.... ......|.++++ .+|+.|+++|+.+ .+.|++++++.+.+.++++++++++.|.+..++
T Consensus       115 v~~il~~~~~~~~r~~~~~~~~~~~~g~~l~~-~~g~~Wk~~Rk~~-~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~  192 (516)
T PLN02290        115 IKELLTKYNTVTGKSWLQQQGTKHFIGRGLLM-ANGADWYHQRHIA-APAFMGDRLKGYAGHMVECTKQMLQSLQKAVES  192 (516)
T ss_pred             HHHHHhcCCCCCCCcchhhhHHHHHhcCCccc-cCchHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999986 44555553221 122235677755 4899999999999 899999999999999999999999999876543


Q ss_pred             C-CeEEehHHHHHHHHHHHHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHH
Q 036575          185 N-GAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRC  263 (528)
Q Consensus       185 ~-~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~  263 (528)
                      + .++|+.+++..+++|+++.++||.+++..+           ++.+.+...............+|++.+++ ....++.
T Consensus       193 ~~~~vd~~~~~~~~~~~vi~~~~fG~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~p~~~~~p-~~~~~~~  260 (516)
T PLN02290        193 GQTEVEIGEYMTRLTADIISRTEFDSSYEKGK-----------QIFHLLTVLQRLCAQATRHLCFPGSRFFP-SKYNREI  260 (516)
T ss_pred             CCceEEhHHHHHHHHHHHHHHHHcCCccccch-----------HHHHHHHHHHHHHHHhhhhhcCchhhhCC-ChhHHHH
Confidence            3 479999999999999999999998865322           33333333322221111112345544442 2334555


Q ss_pred             HHHhhhHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCC-----CCCCCHHHHHHHHHHHHHhhccchHHH
Q 036575          264 RKLVGKVNSFVSKIIEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDG-----ENRLTDSDMIAVLWEMIFRGTDTVAIL  338 (528)
Q Consensus       264 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~-----~~~l~~~ei~~~~~~~~~Ag~dtt~~~  338 (528)
                      .+..+.+.+++.+.|+++++.......     +....|+++.+++...     +..++++++.+++.++++||+|||+++
T Consensus       261 ~~~~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~d~l~~ll~~~~~~~~~~~~l~~~~i~~~~~~~~~AG~dTta~t  335 (516)
T PLN02290        261 KSLKGEVERLLMEIIQSRRDCVEIGRS-----SSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFFAGHETTALL  335 (516)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccC-----CCCCCCHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhhhHHHHHHH
Confidence            666778899999999988765431110     0235789999987432     124889999999999999999999999


Q ss_pred             HHHHHHHHhhChHHHHHHHHHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCC
Q 036575          339 LEWILARMVLHPDIQAKAQIEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAG  418 (528)
Q Consensus       339 l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g  418 (528)
                      ++|++|+|++||++|+|+|+|++++++++ .++++++++||||+|||+||||++|+++.+  +|.+.+|++++||.||||
T Consensus       336 l~~~l~~L~~~P~vq~kl~~Ei~~v~~~~-~~~~~~l~~lpYl~avi~EtlRl~p~~~~~--~R~~~~d~~i~g~~IP~G  412 (516)
T PLN02290        336 LTWTLMLLASNPTWQDKVRAEVAEVCGGE-TPSVDHLSKLTLLNMVINESLRLYPPATLL--PRMAFEDIKLGDLHIPKG  412 (516)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHhCCC-CCCHHHHhcChHHHHHHHHHHHcCCCcccc--ceeecCCeeECCEEECCC
Confidence            99999999999999999999999999854 789999999999999999999999999975  999999999999999999


Q ss_pred             CEEEEeccccccCCCCC-CCCCCCCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCC
Q 036575          419 TTAMVNMWSITHDEEVW-PEANEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSD  497 (528)
Q Consensus       419 ~~v~~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~  497 (528)
                      |.|.++.+++||||++| +||++|+||||++++.   .....++|||.|+|.|+|++||++|++++++.|+++|++++.+
T Consensus       413 t~V~~~~~~~~rdp~~~~~dP~~F~PeRfl~~~~---~~~~~~~pFG~G~R~C~G~~lA~~el~l~la~ll~~f~~~~~~  489 (516)
T PLN02290        413 LSIWIPVLAIHHSEELWGKDANEFNPDRFAGRPF---APGRHFIPFAAGPRNCIGQAFAMMEAKIILAMLISKFSFTISD  489 (516)
T ss_pred             CEEEecHHHhcCChhhhCCChhhcCccccCCCCC---CCCCeEecCCCCCCCCccHHHHHHHHHHHHHHHHHhceEeeCC
Confidence            99999999999999999 8999999999995421   1345799999999999999999999999999999999999876


Q ss_pred             CCCcCCcccccceeeccCceeEEeeecc
Q 036575          498 AGGVDLSECLKLSLEMKNSLVCKAVPRF  525 (528)
Q Consensus       498 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~  525 (528)
                      +.+  .....+++++|..++.+++++|+
T Consensus       490 ~~~--~~~~~~~~~~p~~~~~~~~~~~~  515 (516)
T PLN02290        490 NYR--HAPVVVLTIKPKYGVQVCLKPLN  515 (516)
T ss_pred             Ccc--cCccceeeecCCCCCeEEEEeCC
Confidence            532  22233678889999999999986


No 11 
>PLN02394 trans-cinnamate 4-monooxygenase
Probab=100.00  E-value=1.3e-76  Score=595.72  Aligned_cols=464  Identities=29%  Similarity=0.517  Sum_probs=359.0

Q ss_pred             CCCCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCcccc
Q 036575           47 QTRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKES  124 (528)
Q Consensus        47 ~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~  124 (528)
                      ++++.||||+++|++|+++.+..+..+..+.+|+++|  |++|++++|+.++|+|+||+++++|+.+  ..|.+++... 
T Consensus        27 ~~~~~pPgp~~~p~~g~l~~~~~~~~~~~~~~~~~~y--G~v~~i~~g~~~~v~v~dpe~i~~il~~~~~~~~~r~~~~-  103 (503)
T PLN02394         27 KKLKLPPGPAAVPIFGNWLQVGDDLNHRNLAEMAKKY--GDVFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGSRTRNV-  103 (503)
T ss_pred             CcCCCCcCCCCCCeeeeHHhcCCCchhHHHHHHHHHh--CCeEEEEcCCeeEEEeCCHHHHHHHHHhCCccccCCCCcc-
Confidence            3478899999999999998886554678999999999  8999999999999999999999999975  4566665322 


Q ss_pred             chheecc--ceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhh-cCCeEEehHHHHHHHHHH
Q 036575          125 AYELLFH--RAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLME-KNGAVEVRKVLHFGSLNS  201 (528)
Q Consensus       125 ~~~~~~g--~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~~~~vd~~~~~~~~~~~~  201 (528)
                      ....+.|  .+.+++.+|+.|+++||.+..+.|++++++.+.+.+++.++++++.|.+..+ .++.+|+.++++.+++|+
T Consensus       104 ~~~~~~g~~~~~l~~~~g~~w~~~Rk~~~~~~f~~~~l~~~~~~i~~~v~~lv~~l~~~~~~~~~~v~~~~~~~~~~~dv  183 (503)
T PLN02394        104 VFDIFTGKGQDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEADLVVEDVRANPEAATEGVVIRRRLQLMMYNI  183 (503)
T ss_pred             hHhHhccCCCceeecCCCHHHHHHHHHHHHHhcChHHHHHhhHHHHHHHHHHHHHHHHhhhccCCcEecHHHHHHHHHHH
Confidence            2233323  3455666899999999998559999999999999999999999999976543 234689999999999999


Q ss_pred             HHHHHHhcccccCccccCCCCCCch-HHHHHHHHHHHhhcc--cccccccccccccchhhHHHHHHHHhhhHHH-HHHHH
Q 036575          202 VMMSVFGRSYEFGEKCNYHDDDGSH-ELEGLVREGYELLGT--FNWSDHFPVLSWFDLQGVRKRCRKLVGKVNS-FVSKI  277 (528)
Q Consensus       202 i~~~~fG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~-~~~~~  277 (528)
                      ++.++||.+++..++       ... .+.....+.......  ..+...+|++.+. .....+........... +.+..
T Consensus       184 i~~~~fG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  255 (503)
T PLN02394        184 MYRMMFDRRFESEDD-------PLFLKLKALNGERSRLAQSFEYNYGDFIPILRPF-LRGYLKICQDVKERRLALFKDYF  255 (503)
T ss_pred             HHHHHhCCCcccccc-------hhHHHHHHHHHHHHHHhcccccchhhhchHHHHH-hhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998875331       111 222222222222111  1223344543322 11111222222222222 33445


Q ss_pred             HHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHH
Q 036575          278 IEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDGENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQ  357 (528)
Q Consensus       278 i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~  357 (528)
                      ++++++........   . ....|+++.|++...++.++++++..++.++++||+|||+++++|++|+|++||++|+|||
T Consensus       256 i~~~~~~~~~~~~~---~-~~~~d~l~~ll~~~~~~~l~~~~i~~~~~~~~~AG~dTTa~tl~~~l~~L~~~P~vq~kl~  331 (503)
T PLN02394        256 VDERKKLMSAKGMD---K-EGLKCAIDHILEAQKKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLR  331 (503)
T ss_pred             HHHHHHHhhhccCC---c-chhhhHHHHHHhccccCCCCHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHcCHHHHHHHH
Confidence            66655432211000   0 2346899999987666679999999999999999999999999999999999999999999


Q ss_pred             HHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCCCC
Q 036575          358 IEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVWPE  437 (528)
Q Consensus       358 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~~~  437 (528)
                      +||+++++.++.++++++++||||+|||+|+||++|++|... +|.+.+|++++||.||+||.|.+++|++||||++|+|
T Consensus       332 ~Ei~~v~~~~~~~~~~~l~~lpyl~avi~EtlRl~p~~~~~~-~r~~~~d~~i~g~~IP~Gt~V~~~~~~~~rd~~~~~~  410 (503)
T PLN02394        332 DELDTVLGPGNQVTEPDTHKLPYLQAVVKETLRLHMAIPLLV-PHMNLEDAKLGGYDIPAESKILVNAWWLANNPELWKN  410 (503)
T ss_pred             HHHHHHhCCCCCCCHhHHhhCHHHHHHHHHHHhcCCCccccc-ceecCCCcccCCEEeCCCCEEEEchHHHhCCcccCCC
Confidence            999999987667899999999999999999999999999863 7999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccc--cCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCC-CcCCccccc-ceeec
Q 036575          438 ANEFKPERFLYEDVN--IMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAG-GVDLSECLK-LSLEM  513 (528)
Q Consensus       438 p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~-~~~~~  513 (528)
                      |++|+||||++++..  .......++|||+|+|+|+|++||++|+++++|+|+++|++++.++. +++....+| ++...
T Consensus       411 P~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  490 (503)
T PLN02394        411 PEEFRPERFLEEEAKVEANGNDFRFLPFGVGRRSCPGIILALPILGIVLGRLVQNFELLPPPGQSKIDVSEKGGQFSLHI  490 (503)
T ss_pred             ccccCccccCCCCCcccccCCCCceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHceeEeCCCCCcCccccccCceeecc
Confidence            999999999975321  11134579999999999999999999999999999999999987765 355555564 56656


Q ss_pred             cCceeEEeeeccC
Q 036575          514 KNSLVCKAVPRFF  526 (528)
Q Consensus       514 ~~~~~~~~~~r~~  526 (528)
                      +.++.|++.||+.
T Consensus       491 ~~~~~~~~~~r~~  503 (503)
T PLN02394        491 AKHSTVVFKPRSA  503 (503)
T ss_pred             CCCceEEeecCCC
Confidence            6899999999974


No 12 
>PLN02966 cytochrome P450 83A1
Probab=100.00  E-value=3.2e-76  Score=591.13  Aligned_cols=459  Identities=29%  Similarity=0.550  Sum_probs=356.8

Q ss_pred             CCCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccccc
Q 036575           48 TRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKESA  125 (528)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~~  125 (528)
                      ..+.||||+++|++||++.+....++..+.+|+++|  |++|++++|+.++|+++||+++++|+.+  ..|.+++.....
T Consensus        27 ~~~~ppgp~~~p~~G~l~~l~~~~~~~~~~~~~~~y--G~v~~~~~g~~~~vvi~~p~~i~~vl~~~~~~~~~~~~~~~~  104 (502)
T PLN02966         27 RYKLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKY--GPILSYRIGSRTMVVISSAELAKELLKTQDVNFADRPPHRGH  104 (502)
T ss_pred             CCCCCcCCCCCCeeccHHhcCCCChhHHHHHHHHHh--CCeEEEecCCCcEEEECCHHHHHHHHHhCcccccCCCCCccc
Confidence            356799999999999999885433889999999999  8999999999999999999999999985  456665533222


Q ss_pred             hheecc-ceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHHH
Q 036575          126 YELLFH-RAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMM  204 (528)
Q Consensus       126 ~~~~~g-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  204 (528)
                      .....| .++.+..+|+.|+.+|+.+..++|++++++.+.+.+++.++++++.|.+...+++++|+.+++..+++|+++.
T Consensus       105 ~~~~~~~~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~vdl~~~~~~~t~dvi~~  184 (502)
T PLN02966        105 EFISYGRRDMALNHYTPYYREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCR  184 (502)
T ss_pred             eeeccCcceeeeCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceeHHHHHHHHHHHHHHH
Confidence            111123 3344555799999999994489999999999999999999999999987655566899999999999999999


Q ss_pred             HHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccc-hhhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 036575          205 SVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFD-LQGVRKRCRKLVGKVNSFVSKIIEEHKV  283 (528)
Q Consensus       205 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~-~~~~~~~~~~~~~~l~~~~~~~i~~~~~  283 (528)
                      ++||.+++..+       ....++.+++..............++|++..+. .....+......+...+++.+.++++..
T Consensus       185 ~~fG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  257 (502)
T PLN02966        185 QAFGKKYNEDG-------EEMKRFIKILYGTQSVLGKIFFSDFFPYCGFLDDLSGLTAYMKECFERQDTYIQEVVNETLD  257 (502)
T ss_pred             HHhCCccCccc-------hHHHHHHHHHHHHHHHhCcccHHHhhchhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999886433       111245555555444443333334455433221 1111222333455566677777766543


Q ss_pred             HhhhcccCCCCCCCCCCcHHHHHhhcCCC----CCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHH
Q 036575          284 KRINKNINGGCCDVDEGDFVDVLLGLDGE----NRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIE  359 (528)
Q Consensus       284 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~----~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~E  359 (528)
                      ....        +....|+++.+++..++    ..++++++.+++.++++||+|||+++++|++|+|++||++|+|+++|
T Consensus       258 ~~~~--------~~~~~~~l~~l~~~~~~~~~~~~l~~~~i~~~~~~l~~AG~eTta~~l~~~l~~L~~~P~~q~kl~~E  329 (502)
T PLN02966        258 PKRV--------KPETESMIDLLMEIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAE  329 (502)
T ss_pred             cccc--------ccccccHHHHHHHHHhccCcCCCCCHHHHHHHHHHHHhccccchHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            2110        02346899998864322    35899999999999999999999999999999999999999999999


Q ss_pred             HhHhhCC--CCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCC-C
Q 036575          360 IDNTVGT--ARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVW-P  436 (528)
Q Consensus       360 i~~~~~~--~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~-~  436 (528)
                      +++++++  +..++++++++||||+|||+|+||++|+++... +|.+.+|++++||.||+||.|.+++|++||||++| |
T Consensus       330 i~~v~~~~~~~~~~~~dl~~lpyl~avi~E~LRl~p~v~~~~-~R~~~~d~~l~g~~IP~Gt~V~~~~~~~~rdp~~~g~  408 (502)
T PLN02966        330 VREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLI-PRACIQDTKIAGYDIPAGTTVNVNAWAVSRDEKEWGP  408 (502)
T ss_pred             HHHHhcccCCCcCCHhhccCCcHHHHHHHHHhccCCCccccc-CcccCCCeeEccEEECCCCEEEEecccccCCcccccC
Confidence            9999874  245799999999999999999999999999743 89999999999999999999999999999999999 9


Q ss_pred             CCCCCCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCC---cCCcccccceeec
Q 036575          437 EANEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGG---VDLSECLKLSLEM  513 (528)
Q Consensus       437 ~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~---~~~~~~~~~~~~~  513 (528)
                      ||++|+||||++++......+..++|||+|+|+|+|++||++|++++++.|+++|+|++.++..   ++.....|++..+
T Consensus       409 dP~~F~PeRwl~~~~~~~~~~~~~~pFg~G~R~C~G~~~A~~el~~~la~ll~~f~i~~~~~~~~~~~~~~~~~~~~~~~  488 (502)
T PLN02966        409 NPDEFRPERFLEKEVDFKGTDYEFIPFGSGRRMCPGMRLGAAMLEVPYANLLLNFNFKLPNGMKPDDINMDVMTGLAMHK  488 (502)
T ss_pred             ChhhCChhhhcCCCCCcCCCcCCccCCCCCCCCCCCHHHHHHHHHHHHHHHHHhceeeCCCCCCcccCCcccccCeeecc
Confidence            9999999999975432222456799999999999999999999999999999999999877642   3333455666534


Q ss_pred             cCceeEEeeec
Q 036575          514 KNSLVCKAVPR  524 (528)
Q Consensus       514 ~~~~~~~~~~r  524 (528)
                      +..+.+..++.
T Consensus       489 ~~~~~~~~~~~  499 (502)
T PLN02966        489 SQHLKLVPEKV  499 (502)
T ss_pred             CCCeEEEEEeC
Confidence            44555444443


No 13 
>PLN00168 Cytochrome P450; Provisional
Probab=100.00  E-value=1.6e-75  Score=587.88  Aligned_cols=466  Identities=27%  Similarity=0.460  Sum_probs=363.5

Q ss_pred             CCCCCCCCCCCcccccchhhcC--CchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccc
Q 036575           48 TRTAIPGPSGLPILGMVLAFTG--SLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKE  123 (528)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~--~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~  123 (528)
                      ..+.||||+++|++||++.+..  ..++..+.+|+++|  |++|++++|+.++|+++||+++++++.+  ..|++++...
T Consensus        33 ~~~lpPgp~~~pl~G~l~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~dpe~~~~il~~~~~~f~~rp~~~  110 (519)
T PLN00168         33 GRRLPPGPPAVPLLGSLVWLTNSSADVEPLLRRLIARY--GPVVSLRVGSRLSVFVADRRLAHAALVERGAALADRPAVA  110 (519)
T ss_pred             CCCCCcCCCCCcccccHHhhccccccHHHHHHHHHHHh--CCeEEEEcCCccEEEECCHHHHHHHHHhcCCccccCCccc
Confidence            4567899999999999987642  23788999999999  8999999999999999999999999975  6677776533


Q ss_pred             cchheec-cceeee-CCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHH
Q 036575          124 SAYELLF-HRAIGF-APFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNS  201 (528)
Q Consensus       124 ~~~~~~~-g~~~~~-~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~  201 (528)
                      . ...+. +.+++. ..+|+.|+++||.+.+++|++++++.+.+.+.++++++++.|.+....++.+|+.+.+..++.++
T Consensus       111 ~-~~~~~~~~~~~~~~~~G~~Wk~~Rr~~~~~~fs~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~v~~~~~~~~~~~~i  189 (519)
T PLN00168        111 S-SRLLGESDNTITRSSYGPVWRLLRRNLVAETLHPSRVRLFAPARAWVRRVLVDKLRREAEDAAAPRVVETFQYAMFCL  189 (519)
T ss_pred             c-hhhhccCCCceeCCCCCHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHH
Confidence            2 12221 223332 35899999999854489999999999999999999999999987644445689999999999999


Q ss_pred             HHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhh-cccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHH
Q 036575          202 VMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELL-GTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEE  280 (528)
Q Consensus       202 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~  280 (528)
                      ++.++||.+++...         ...+........... ....+...+|++.+.......++..+..+.+.+++..++++
T Consensus       190 i~~~~fG~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  260 (519)
T PLN00168        190 LVLMCFGERLDEPA---------VRAIAAAQRDWLLYVSKKMSVFAFFPAVTKHLFRGRLQKALALRRRQKELFVPLIDA  260 (519)
T ss_pred             HHHHHcCCCcChhh---------HHHHHHHHHHHHHHhcCCCCHHHhCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999998875211         012223332222211 12233345564432211122344556778889999999998


Q ss_pred             HHHHhhhcccCCCCC---CCCCCcHHHHHhhcC----CCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHH
Q 036575          281 HKVKRINKNINGGCC---DVDEGDFVDVLLGLD----GENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQ  353 (528)
Q Consensus       281 ~~~~~~~~~~~~~~~---~~~~~d~l~~ll~~~----~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q  353 (528)
                      +++........+...   .....|+++.|++..    .+..++++++.+++.++++||+|||+++++|++++|++||++|
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~~~~~lt~~~i~~~~~~l~~AG~dTTa~~l~~~l~~L~~~P~~q  340 (519)
T PLN00168        261 RREYKNHLGQGGEPPKKETTFEHSYVDTLLDIRLPEDGDRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQ  340 (519)
T ss_pred             HHHHhhhccccCccccccccccccHHHHHHhhhccccccCCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhCHHHH
Confidence            876432100000000   012468999998743    1235999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHhhCC-CCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCC
Q 036575          354 AKAQIEIDNTVGT-ARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDE  432 (528)
Q Consensus       354 ~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~  432 (528)
                      +|+++||++++++ .+.++++++++||||+|||+||||++|+++... +|.+.+|++++||.||||+.|.++++++||||
T Consensus       341 ~kl~~Ei~~v~~~~~~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~-~R~~~~d~~~~g~~IpkGt~v~~~~~~~~~d~  419 (519)
T PLN00168        341 SKLHDEIKAKTGDDQEEVSEEDVHKMPYLKAVVLEGLRKHPPAHFVL-PHKAAEDMEVGGYLIPKGATVNFMVAEMGRDE  419 (519)
T ss_pred             HHHHHHHHHHhCCCCCCCCHHHhhCChHHHHHHHHHhhcCCCCcccC-CccCCCCccCCCEEECCCCEEEEChHHHhcCc
Confidence            9999999999975 366899999999999999999999999998753 89999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCcccc-----cCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccc
Q 036575          433 EVWPEANEFKPERFLYEDVN-----IMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECL  507 (528)
Q Consensus       433 ~~~~~p~~F~P~R~l~~~~~-----~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~  507 (528)
                      ++|+||++|+||||++++..     ...++..++|||.|+|+|+|++||++|+++++++|+++|+|++.++.+.+.....
T Consensus       420 ~~~~~p~~F~PeRf~~~~~~~~~~~~~~~~~~~~pFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~  499 (519)
T PLN00168        420 REWERPMEFVPERFLAGGDGEGVDVTGSREIRMMPFGVGRRICAGLGIAMLHLEYFVANMVREFEWKEVPGDEVDFAEKR  499 (519)
T ss_pred             cccCCccccCcccCCCCCCCccccccccCCcceeCCCCCCCCCCcHHHHHHHHHHHHHHHHHHccceeCCCCcCChhhhc
Confidence            99999999999999974211     1113457999999999999999999999999999999999998776544444445


Q ss_pred             cceeeccCceeEEeeeccC
Q 036575          508 KLSLEMKNSLVCKAVPRFF  526 (528)
Q Consensus       508 ~~~~~~~~~~~~~~~~r~~  526 (528)
                      +++..+++++.|++++|+.
T Consensus       500 ~~~~~~~~~~~~~~~~R~~  518 (519)
T PLN00168        500 EFTTVMAKPLRARLVPRRT  518 (519)
T ss_pred             eeEEeecCCcEEEEEeccC
Confidence            6677788899999999975


No 14 
>KOG0157 consensus Cytochrome P450 CYP4/CYP19/CYP26 subfamilies [Secondary metabolites biosynthesis, transport and catabolism; Lipid transport and metabolism]
Probab=100.00  E-value=1.4e-76  Score=586.16  Aligned_cols=456  Identities=25%  Similarity=0.412  Sum_probs=372.8

Q ss_pred             CCCCCCCCCCCcccccchhhcCC--chHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccc
Q 036575           48 TRTAIPGPSGLPILGMVLAFTGS--LTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKE  123 (528)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~~--~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~  123 (528)
                      ....+|||+++|++|++..+...  ....++.++..+|  |++|+.|+|+.++|+++||+.+++|+.+  +.+.+.+.+.
T Consensus        33 ~~~~~~gp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~~dp~~~~~Il~~~~~~~~k~~~~~  110 (497)
T KOG0157|consen   33 KKKLPPGPPGWPLIGNLLEFLKPLEEILDFVTELLSRY--GPIFKTWLGGKPTVVTTDPELIEEILKSSNENYPKGPDYP  110 (497)
T ss_pred             HhccCCCCCCCCcccchHHhhcchhHHHHHHHHHHHHc--CchhhhhhcCeeEEEEcCHHHHHHHHhcCcccCCCchhHH
Confidence            46789999999999999998644  4778889999999  7999999999999999999999999973  5566666677


Q ss_pred             cchheeccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHH
Q 036575          124 SAYELLFHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVM  203 (528)
Q Consensus       124 ~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~  203 (528)
                      .....++|+|+++. +|+.|+++|+++ .+.|+.+.++.+...+.+.+..++..+.... .+..+|+.+.++++|+|+++
T Consensus       111 ~~~~~~lG~gll~~-~g~~W~~~Rk~~-~~~f~~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~vd~~~~~~~~tld~i~  187 (497)
T KOG0157|consen  111 ESLKPWLGDGLLFS-DGEKWHKHRKLL-TPAFHFEILKSFVPVFIESSLILLLLLELAA-SGEEVDLQDLLKRLTLDIIC  187 (497)
T ss_pred             HHHHHHhcCccccC-CchHHHHHHhhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCeEcHHHHHHHHHHHHHH
Confidence            67777788899777 499999999999 8999999999999999999999888888754 23339999999999999999


Q ss_pred             HHHHhcccccCccccCCCCCCch-HHHHHHHHHHHhhcccccccccc-cccccchhhHHHHHHHHhhhHHHHHHHHHHHH
Q 036575          204 MSVFGRSYEFGEKCNYHDDDGSH-ELEGLVREGYELLGTFNWSDHFP-VLSWFDLQGVRKRCRKLVGKVNSFVSKIIEEH  281 (528)
Q Consensus       204 ~~~fG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  281 (528)
                      .++||......+       .... ++..++..........   ...| +..++...+..++..++.+.++++++++|++|
T Consensus       188 ~~~~G~~~~~~~-------~~~~~~~~~a~~~~~~~~~~~---~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~iI~~r  257 (497)
T KOG0157|consen  188 KTAMGPESLDAE-------GPELFEYVQAFDDLTELISKR---INLPLGTKFLYGLKSERKLKKARKILHDFLEKIIRER  257 (497)
T ss_pred             HHhcCCcccccc-------CCcccHHHHHHHHHHHHHHHH---HcCchhhhHHhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            999992221111       1222 6666666554443221   1223 33333222267888899999999999999999


Q ss_pred             HHHhhhcccCCCCCCCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHh
Q 036575          282 KVKRINKNINGGCCDVDEGDFVDVLLGLDGENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEID  361 (528)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~  361 (528)
                      +++.......+   .....|+++.+....+ +.++++++++++.+|++||+||||++++|+++.|+.||++|+|+++|++
T Consensus       258 r~~~~~~~~~~---~~~~~d~L~~~~~~~~-~~l~~~~i~d~v~tf~faG~DTTss~ltw~l~~La~hP~vq~k~~eEi~  333 (497)
T KOG0157|consen  258 REELEKEGSGE---EKKRLDFLDTLLLEED-KPLTDEDIRDEVDTFMFAGHDTTSSALTWTLWLLAKHPEVQEKLREEVD  333 (497)
T ss_pred             HHHHHhcCCcc---cchhhhHHHHHHHhcc-CCCCHHHHHHHHHHheeeccchHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            98765322110   1346788885333333 6799999999999999999999999999999999999999999999999


Q ss_pred             HhhCCCCCC-CCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeee-cceeeCCCCEEEEeccccccCCCCCC-CC
Q 036575          362 NTVGTARLV-SDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQV-GQHLVPAGTTAMVNMWSITHDEEVWP-EA  438 (528)
Q Consensus       362 ~~~~~~~~~-~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l-~g~~Ip~g~~v~~~~~~~~~d~~~~~-~p  438 (528)
                      +++++.... +....++|+||++||+|||||+|++|..  .|.+.+|+++ +||.||||+.|.++++++||||++|+ ||
T Consensus       334 ~i~~~~~~~~~~~~~~~m~yl~~vi~EsLRLyppvp~~--~R~~~~d~~l~~g~~IPkG~~V~i~~~~~~r~~~~~~~dp  411 (497)
T KOG0157|consen  334 EILGNRDDKWEVEKLDQMKYLEMVIKESLRLYPPVPLV--ARKATKDVKLPGGYTIPKGTNVLISIYALHRDPRVWGEDP  411 (497)
T ss_pred             HHhCCCCCCCChhhhhhhHHHHHHHHHHhccCCCCchh--hcccCCCeEcCCCcEeCCCCEEEEehHHhccCccccCCCh
Confidence            999843222 2222235999999999999999999988  8999999999 58999999999999999999999996 99


Q ss_pred             CCCCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccCcee
Q 036575          439 NEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKNSLV  518 (528)
Q Consensus       439 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  518 (528)
                      ++|+||||+++......++++++|||+|+|.|+|++||++|+|+++++|+++|++++..+..  ......++++|..+++
T Consensus       412 ~~F~PeRf~~~~~~~~~~~~~fipFsaGpR~CiG~~fA~lemKv~l~~ll~~f~~~~~~~~~--~~~~~~~~l~~~~gl~  489 (497)
T KOG0157|consen  412 EEFDPERFLDGEEKAKRHPFAFIPFSAGPRNCIGQKFAMLEMKVVLAHLLRRFRIEPVGGDK--PKPVPELTLRPKNGLK  489 (497)
T ss_pred             hhcCccccCCCCCcCCCCCccccCCCCCcccchhHHHHHHHHHHHHHHHHHheEEEecCCCC--ceeeeEEEEEecCCeE
Confidence            99999999975433333578999999999999999999999999999999999999988743  5556788999999999


Q ss_pred             EEeeeccC
Q 036575          519 CKAVPRFF  526 (528)
Q Consensus       519 ~~~~~r~~  526 (528)
                      |++++|..
T Consensus       490 v~~~~r~~  497 (497)
T KOG0157|consen  490 VKLRPRGS  497 (497)
T ss_pred             EEEEeCCC
Confidence            99999964


No 15 
>PLN02655 ent-kaurene oxidase
Probab=100.00  E-value=6.8e-76  Score=583.20  Aligned_cols=458  Identities=25%  Similarity=0.467  Sum_probs=367.3

Q ss_pred             CCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccccchhee
Q 036575           52 IPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKESAYELL  129 (528)
Q Consensus        52 ~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~~~~~~  129 (528)
                      ||||+++|++||++++..+.++..+.+|+++|  |++|++++|+.++|+|+||+++++|+.+  ..|++++..... ..+
T Consensus         1 ppgp~~lP~iG~l~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~~pe~~k~il~~~~~~f~~r~~~~~~-~~~   77 (466)
T PLN02655          1 VPAVPGLPVIGNLLQLKEKKPHRTFTKWSEIY--GPIYTIRTGASSVVVLNSTEVAKEAMVTKFSSISTRKLSKAL-TVL   77 (466)
T ss_pred             CcCCCCCCccccHHHcCCCchhHHHHHHHHHh--CCeEEEEECCEeEEEeCCHHHHHHHHHhcCchhcCCChhhHH-HHH
Confidence            68999999999999987544899999999999  8999999999999999999999999985  667777654333 223


Q ss_pred             cc-c-eeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhh--cCCeEEehHHHHHHHHHHHHHH
Q 036575          130 FH-R-AIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLME--KNGAVEVRKVLHFGSLNSVMMS  205 (528)
Q Consensus       130 ~g-~-~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~--~~~~vd~~~~~~~~~~~~i~~~  205 (528)
                      .| . .+++..+|+.|+++||.+..++|+...++.+.+.+++.++.+++.+.+...  .++++|+.+.+.++++|+++.+
T Consensus        78 ~~~~~~~~~~~~g~~wr~~Rr~~~~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~  157 (466)
T PLN02655         78 TRDKSMVATSDYGDFHKMVKRYVMNNLLGANAQKRFRDTRDMLIENMLSGLHALVKDDPHSPVNFRDVFENELFGLSLIQ  157 (466)
T ss_pred             hcCCCceeeCCCcHHHHHHHHHHHHHhcCchHHHHhHHHHHHHHHHHHHHHHhhccccCCCceeHHHHHHHHHHHHHHHH
Confidence            33 3 244444689999999877678899888999999999999999999876543  3567999999999999999999


Q ss_pred             HHhcccccCccccCCCCCC-chHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 036575          206 VFGRSYEFGEKCNYHDDDG-SHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEEHKVK  284 (528)
Q Consensus       206 ~fG~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  284 (528)
                      +||.+++..+..+...... ...+...+...+.......+.+++|++.+++.....+...+....+.+++..++++++++
T Consensus       158 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  237 (466)
T PLN02655        158 ALGEDVESVYVEELGTEISKEEIFDVLVHDMMMCAIEVDWRDFFPYLSWIPNKSFETRVQTTEFRRTAVMKALIKQQKKR  237 (466)
T ss_pred             HhccccccccccccccchhhHHHHHHHHHHHHHHhCCcchhhhhhhhhhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999877543111110000 012333344444443333345677877776433333344344445567888888877755


Q ss_pred             hhhcccCCCCCCCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHhHhh
Q 036575          285 RINKNINGGCCDVDEGDFVDVLLGLDGENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEIDNTV  364 (528)
Q Consensus       285 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~  364 (528)
                      ...       + ....|+++.+++..  ..++++++.+++.++++||+|||+++++|++++|++||++|+|+|+|+++++
T Consensus       238 ~~~-------~-~~~~d~l~~ll~~~--~~ls~~~i~~~~~~~~~ag~dtta~~l~~~~~~l~~~p~~~~~l~~Ei~~~~  307 (466)
T PLN02655        238 IAR-------G-EERDCYLDFLLSEA--THLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREIREVC  307 (466)
T ss_pred             hcC-------C-CCcccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHh
Confidence            321       1 23468999999764  3599999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCCCCCCCCCCC
Q 036575          365 GTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVWPEANEFKPE  444 (528)
Q Consensus       365 ~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~  444 (528)
                      +++. ++++++++||||+|||+||||++|+++... +|.+.+|++++||.||||+.|.++.+++||||++|+||++|+||
T Consensus       308 ~~~~-~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~-~r~~~~d~~~~g~~ip~gt~v~~~~~~~~~d~~~~~~p~~F~Pe  385 (466)
T PLN02655        308 GDER-VTEEDLPNLPYLNAVFHETLRKYSPVPLLP-PRFVHEDTTLGGYDIPAGTQIAINIYGCNMDKKRWENPEEWDPE  385 (466)
T ss_pred             CCCC-CCHHHHhcChHHHHHHHHHhccCCCcCCCC-CcccCCCcccCCEEECCCCEEEecHHHhcCCcccCCChhccCcc
Confidence            8544 899999999999999999999999999763 79999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccCceeEEeeec
Q 036575          445 RFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKNSLVCKAVPR  524 (528)
Q Consensus       445 R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  524 (528)
                      ||++++... .....++|||+|+|.|+|++||+.|+++++++|+++|++++.++.. +.....+++.++++++.|++++|
T Consensus       386 R~~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~r  463 (466)
T PLN02655        386 RFLGEKYES-ADMYKTMAFGAGKRVCAGSLQAMLIACMAIARLVQEFEWRLREGDE-EKEDTVQLTTQKLHPLHAHLKPR  463 (466)
T ss_pred             ccCCCCccc-CCcccccCCCCCCCCCCcHHHHHHHHHHHHHHHHHHeEEEeCCCCc-cccchhheeEeecCCcEEEEeec
Confidence            999754221 1346799999999999999999999999999999999999876532 23345678888999999999999


Q ss_pred             cC
Q 036575          525 FF  526 (528)
Q Consensus       525 ~~  526 (528)
                      .+
T Consensus       464 ~~  465 (466)
T PLN02655        464 GS  465 (466)
T ss_pred             CC
Confidence            75


No 16 
>KOG0159 consensus Cytochrome P450 CYP11/CYP12/CYP24/CYP27 subfamilies [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.5e-76  Score=544.35  Aligned_cols=457  Identities=22%  Similarity=0.334  Sum_probs=387.2

Q ss_pred             CCCCCCCCCCCCcccccchhhc---CCchHHHHHHHHHhcCCCCeEEEE-cCCeeEEEecCHHHHHHHhhc-cccCCCC-
Q 036575           47 QTRTAIPGPSGLPILGMVLAFT---GSLTHRVLAKLAVSFRAKPLMAFS-VGFTRFVISSHPDTAKEILNS-SAFADRP-  120 (528)
Q Consensus        47 ~~~~~~PgP~~~p~~G~~~~~~---~~~~~~~~~~~~~ky~~g~v~~v~-lg~~~~v~i~dp~~v~~i~~~-~~~~~~~-  120 (528)
                      .+...||||.++|++|.++.+.   -.+.|+...+.+++|  |+||+.. +|+...|.+.||++++.+|++ ..++.|| 
T Consensus        47 r~~~~IP~p~~~~~l~~l~~~~~~~~~~lh~~~~~~~~~Y--G~I~~~~~~G~~~~V~v~~p~d~E~v~r~EG~~P~Rp~  124 (519)
T KOG0159|consen   47 RPFEEIPGPKGLPFLGLLWIWRAGGATKLHQHIVQLHQKY--GPIFREGMLGRVDLVHVYNPDDVEKVFRNEGKYPFRPL  124 (519)
T ss_pred             CChhhcCCCCCccHHHHHHHHHhhhhhHHHHHHHHHHHHc--CceeeeccCCCCCeEEeeCHHHHHHHHhcCCCCCCccc
Confidence            3567899999999999998542   225889999999999  9999999 888999999999999999998 6678885 


Q ss_pred             ccccc--hheecc--ceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhc---CCeEEehHH
Q 036575          121 VKESA--YELLFH--RAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEK---NGAVEVRKV  193 (528)
Q Consensus       121 ~~~~~--~~~~~g--~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~---~~~vd~~~~  193 (528)
                      .+..+  ++-.++  .|++ ..+|+.|.+.|..++..++++++++.|.+.++.++++++..++...+.   ..+.|+.+.
T Consensus       125 ~~~~w~~~rd~~~~~~Gl~-~~~G~~W~~~Rs~ln~~ll~P~~v~~yl~~l~~V~~DF~~~l~~~r~~~~~~~~~D~~~~  203 (519)
T KOG0159|consen  125 LIEPWVAYRDFRGGVCGLF-LLEGPEWQRLRSALNPLLLQPQAVRRYLPQLNAVSDDFVERLRAQRDPERGELVPDFAQE  203 (519)
T ss_pred             ccchhhhhHHhhccCCCcc-cCCCHHHHHHHHHhchhhcCHHHHHHHhhHHHHHHHHHHHHHHHHhcccccccchhHHHH
Confidence            33222  233344  6664 559999999999998888999999999999999999999999988762   235699999


Q ss_pred             HHHHHHHHHHHHHHhcccccCccccCCCCCCch-HHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHH
Q 036575          194 LHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSH-ELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNS  272 (528)
Q Consensus       194 ~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~  272 (528)
                      +.++++++||.++||.+++++...    .+++. .+++++..++.......+.  .++.+++ +++.+++..++.+.+.+
T Consensus       204 l~~wslEsi~~V~l~~rlG~L~~~----~~~~a~~fi~ai~~~F~~s~~l~~~--p~l~r~~-~t~~wk~~~~~~D~i~~  276 (519)
T KOG0159|consen  204 LYRWSLESICLVLLGTRLGLLGES----PPSEAQQFIDAIKKMFESSAQLMLM--PSLWRYF-PTKVWKDFVRAWDQIFD  276 (519)
T ss_pred             HHHHHHHHHHHHHHhcccccccCC----CCHHHHHHHHHHHHHHHhHHHHHhc--chHHHhC-CChHHHHHHHHHHHHHH
Confidence            999999999999999999998842    12223 7888888888765543321  2556666 57788899999999999


Q ss_pred             HHHHHHHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHH
Q 036575          273 FVSKIIEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDGENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDI  352 (528)
Q Consensus       273 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~  352 (528)
                      +....|+...++.+.....+    .+..+.+..++.   .+.++.+++..++++++.||.||||+++.|+||+|++||++
T Consensus       277 ~~~~~Id~~l~~l~~~~~~~----~~~~~~l~~~L~---~~~l~~k~~~~~~~dll~aGvDTTs~tl~~~Ly~LarnP~~  349 (519)
T KOG0159|consen  277 VGDKYIDNALEELEKQDSAG----SEYTGSLLELLL---RKELSRKDAKANVMDLLAAGVDTTSNTLLWALYELARNPEV  349 (519)
T ss_pred             HHHHHHHHHHHHHHhccccc----cchhHHHHHHHH---HccCCHHHHHHHHHHHHHHhccchHHHHHHHHHHHhcChHH
Confidence            99999999998876432211    122333333333   23589999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhHhhCC-CCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccC
Q 036575          353 QAKAQIEIDNTVGT-ARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHD  431 (528)
Q Consensus       353 q~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d  431 (528)
                      |++|++|+.++... +..++.+++.+||||.||||||+||||++|..  .|+..+|.+++||.|||||.|.++.+.+.+|
T Consensus       350 Q~~L~~Ei~~~~p~~~~~~~~~~l~~~pyLrAcIKEtlRlyPv~~~~--~R~l~~D~vL~gY~vPagT~V~l~~~~~~r~  427 (519)
T KOG0159|consen  350 QQRLREEILAVLPSGNSELTQKALTNMPYLRACIKETLRLYPVVPGN--GRVLPKDLVLSGYHVPAGTLVVLFLYVLGRN  427 (519)
T ss_pred             HHHHHHHHHhhCCCcccccchHHHhhCHHHHHHHHhhhceecccccc--ccccchhceeccceecCCCeEEEeehhhccC
Confidence            99999999999886 68899999999999999999999999999998  8999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCccccccee
Q 036575          432 EEVWPEANEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSL  511 (528)
Q Consensus       432 ~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  511 (528)
                      |+.|++|++|+|||||+++. ...++..++|||.|+|+|+|+++|.+|+.+.||+|+++|+++..++.  +....+.+++
T Consensus       428 ~~~F~~p~~F~PeRWL~~~~-~~~~pF~~LPFGfG~R~C~GRRiAElEl~llLarllr~f~V~~~~~~--pv~~~~~~il  504 (519)
T KOG0159|consen  428 PAYFPDPEEFLPERWLKPST-KTIHPFASLPFGFGPRMCLGRRIAELELHLLLARLLRNFKVEFLHEE--PVEYVYRFIL  504 (519)
T ss_pred             hhhCCCccccChhhhccccc-CCCCCceecCCCCCccccchHHHHHHHHHHHHHHHHHhcceeecCCC--CccceeEEEE
Confidence            99999999999999998764 23378899999999999999999999999999999999999988864  4455677888


Q ss_pred             eccCceeEEeeecc
Q 036575          512 EMKNSLVCKAVPRF  525 (528)
Q Consensus       512 ~~~~~~~~~~~~r~  525 (528)
                      .|..++.+++++|.
T Consensus       505 ~P~~~l~f~f~~r~  518 (519)
T KOG0159|consen  505 VPNRPLRFKFRPRN  518 (519)
T ss_pred             cCCCCcceeeeeCC
Confidence            89999999999985


No 17 
>PLN03018 homomethionine N-hydroxylase
Probab=100.00  E-value=1e-73  Score=571.41  Aligned_cols=469  Identities=25%  Similarity=0.403  Sum_probs=353.3

Q ss_pred             CCCCCCCCCCCcccccchhhcCCch-HHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCcccc
Q 036575           48 TRTAIPGPSGLPILGMVLAFTGSLT-HRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKES  124 (528)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~~~~-~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~  124 (528)
                      ..+.||||+++|++||++++..+++ ...+.++.++|+ |+||++++|+.++|+|+||+++++++.+  ..|++|+....
T Consensus        38 ~~~~PPgp~~~P~iGnl~~l~~~~~~~~~~~~~~~~~~-g~i~~~~lg~~~~vvvsdpe~ikevl~~~~~~f~~rp~~~~  116 (534)
T PLN03018         38 SRQLPPGPPGWPILGNLPELIMTRPRSKYFHLAMKELK-TDIACFNFAGTHTITINSDEIAREAFRERDADLADRPQLSI  116 (534)
T ss_pred             CCCCCcCCCCCCeeccHHHhccCCCcchhHHHHHHHhC-CCeEEEEeCCccEEEECCHHHHHHHHHhCcHhhcCCCCchh
Confidence            3457999999999999998753312 245667777764 7999999999999999999999999985  55888775433


Q ss_pred             chheecc-ceeeeCCCChHHHHHHhhhhccCC-cHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHH
Q 036575          125 AYELLFH-RAIGFAPFGEYWRNLRRISGTHLF-SPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSV  202 (528)
Q Consensus       125 ~~~~~~g-~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i  202 (528)
                      ......+ .++++..+|+.|+++|+++ .+.| +......+.+..+.+++++++.+.+..+.++++|+.+++.++++|++
T Consensus       117 ~~~l~~~~~~i~~~~~G~~Wk~~Rk~l-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~~vi  195 (534)
T PLN03018        117 METIGDNYKSMGTSPYGEQFMKMKKVI-TTEIMSVKTLNMLEAARTIEADNLIAYIHSMYQRSETVDVRELSRVYGYAVT  195 (534)
T ss_pred             hhhhccCCCceEecCCCHHHHHHHHHH-HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeHHHHHHHHHHHHH
Confidence            3222111 3566665799999999999 5654 55555556666667889999999865444567999999999999999


Q ss_pred             HHHHHhcccccCccccCCCCCCch-HHHHHHHHHHHh---hcccccccccc-cccccchhhHHHHHHHHhhhHHHHHHHH
Q 036575          203 MMSVFGRSYEFGEKCNYHDDDGSH-ELEGLVREGYEL---LGTFNWSDHFP-VLSWFDLQGVRKRCRKLVGKVNSFVSKI  277 (528)
Q Consensus       203 ~~~~fG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~P-~l~~~~~~~~~~~~~~~~~~l~~~~~~~  277 (528)
                      +.++||.+++..+.... +..... .+...+......   .......+.+| |+.+........+.......+.+++.+.
T Consensus       196 ~~~~fG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (534)
T PLN03018        196 MRMLFGRRHVTKENVFS-DDGRLGKAEKHHLEVIFNTLNCLPGFSPVDYVERWLRGWNIDGQEERAKVNVNLVRSYNNPI  274 (534)
T ss_pred             HHHHhCCcccccccccc-ccccchhHHHHHHHHHHHHHHHhCCCcHHHHhhhhhhhhcccchHHHHHHHHHHHHHHHHHH
Confidence            99999999865432110 001111 122122222221   11111223333 4432211122344445566788888999


Q ss_pred             HHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCCCC---CCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHH
Q 036575          278 IEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDGEN---RLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQA  354 (528)
Q Consensus       278 i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~---~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~  354 (528)
                      ++++++......     ++....|+++.+++...++   .++++++.+++.++++||+|||+++++|++++|++||++|+
T Consensus       275 i~~~~~~~~~~~-----~~~~~~d~l~~ll~~~~~~~~~~ls~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~P~~q~  349 (534)
T PLN03018        275 IDERVELWREKG-----GKAAVEDWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILR  349 (534)
T ss_pred             HHHHHHHhhhcc-----CCCCcccHHHHHHHhhcccCCCCCCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHH
Confidence            988876432110     1123468999999754332   38999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCC
Q 036575          355 KAQIEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEV  434 (528)
Q Consensus       355 ~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~  434 (528)
                      |+++||+++++.++.++.+++.+|||++|||+|+||++|++|... +|.+.+|++++||.||||+.|.++.+++||||++
T Consensus       350 kl~~Ei~~v~~~~~~~~~~~~~~lpyl~a~i~EtlRl~p~~~~~~-~r~~~~d~~i~G~~IpkGt~V~~~~~~~~~dp~~  428 (534)
T PLN03018        350 KALKELDEVVGKDRLVQESDIPNLNYLKACCRETFRIHPSAHYVP-PHVARQDTTLGGYFIPKGSHIHVCRPGLGRNPKI  428 (534)
T ss_pred             HHHHHHHHHhCCCCCCCHHHhcCCHHHHHHHHHHHhcCCCccccC-CcccCCCeeECCEEECCCCEEEEChHHhcCCccc
Confidence            999999999987777899999999999999999999999999763 6999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCccccc-----CCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCC-CcCCccccc
Q 036575          435 WPEANEFKPERFLYEDVNI-----MGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAG-GVDLSECLK  508 (528)
Q Consensus       435 ~~~p~~F~P~R~l~~~~~~-----~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~-~~~~~~~~~  508 (528)
                      |+||++|+||||++++...     ...+..++|||+|+|.|+|++||++|+++++++|+++|++++.++. +++.....+
T Consensus       429 ~~~p~~F~PeRfl~~~~~~~~~~~~~~~~~~lpFG~G~R~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~  508 (534)
T PLN03018        429 WKDPLVYEPERHLQGDGITKEVTLVETEMRFVSFSTGRRGCVGVKVGTIMMVMMLARFLQGFNWKLHQDFGPLSLEEDDA  508 (534)
T ss_pred             CCCccccCCccCCCCCCccccccccCCCCCccCCCCCCCCCccHHHHHHHHHHHHHHHHHhceEEeCCCCCCCCcccccc
Confidence            9999999999999743211     1134679999999999999999999999999999999999987653 333433445


Q ss_pred             ceeeccCceeEEeeeccC
Q 036575          509 LSLEMKNSLVCKAVPRFF  526 (528)
Q Consensus       509 ~~~~~~~~~~~~~~~r~~  526 (528)
                      .+.. +.++.|++++|..
T Consensus       509 ~~~~-p~~~~v~~~~R~~  525 (534)
T PLN03018        509 SLLM-AKPLLLSVEPRLA  525 (534)
T ss_pred             ceec-CCCeEEEEEeccc
Confidence            5554 4799999999953


No 18 
>PLN02169 fatty acid (omega-1)-hydroxylase/midchain alkane hydroxylase
Probab=100.00  E-value=8.5e-74  Score=570.24  Aligned_cols=448  Identities=20%  Similarity=0.313  Sum_probs=346.3

Q ss_pred             CCCCCCCCCCcccccchhhcCC--chHHHHHHHHHhcCCCCeEE---EEcCCeeEEEecCHHHHHHHhhc--cccCCCCc
Q 036575           49 RTAIPGPSGLPILGMVLAFTGS--LTHRVLAKLAVSFRAKPLMA---FSVGFTRFVISSHPDTAKEILNS--SAFADRPV  121 (528)
Q Consensus        49 ~~~~PgP~~~p~~G~~~~~~~~--~~~~~~~~~~~ky~~g~v~~---v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~  121 (528)
                      .+.+|||+++|++||+..+.++  ..++.+.+...+|  |..++   .|+|+.++|+|+||+++++|+.+  ..|.+++.
T Consensus        30 ~~~~p~p~~~pl~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~g~~~~vvv~dpe~i~~il~~~~~~~~k~~~  107 (500)
T PLN02169         30 PHGQPILKNWPFLGMLPGMLHQIPRIYDWTVEVLEAS--NLTFYFKGPWLSGTDMLFTADPKNIHHILSSNFGNYPKGPE  107 (500)
T ss_pred             cCCCCCCCCCCcccchHHHHHccCcHHHHHHHHHHhC--CCcEEEEeeccCCCCeEEEcCHHHHHHHHhhCcccCCCcHH
Confidence            4579999999999999877644  1223333333446  55544   68899999999999999999986  45666543


Q ss_pred             cccchheeccceeeeCCCChHHHHHHhhhhccCCcHHHHhH--hHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHH
Q 036575          122 KESAYELLFHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSV--LGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSL  199 (528)
Q Consensus       122 ~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~--~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~  199 (528)
                      .... ....|.|++++ +|+.|+++|+++ ++.|+...++.  +.+.+++.++.+++.+.+.+.++.++|+.+.+.++++
T Consensus       108 ~~~~-~~~~g~gl~~~-~g~~Wr~~Rk~l-~p~F~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~t~  184 (500)
T PLN02169        108 FKKI-FDVLGEGILTV-DFELWEDLRKSN-HALFHNQDFIELSLSSNKSKLKEGLVPFLDNAAHENIIIDLQDVFMRFMF  184 (500)
T ss_pred             HHHH-HHhhcCccccc-CcHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEeHHHHHHHHHH
Confidence            3322 23457888665 899999999999 89999988764  3467778888899998876556678999999999999


Q ss_pred             HHHHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhccccccccccccc-----ccchhhHHHHHHHHhhhHHHHH
Q 036575          200 NSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLS-----WFDLQGVRKRCRKLVGKVNSFV  274 (528)
Q Consensus       200 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~-----~~~~~~~~~~~~~~~~~l~~~~  274 (528)
                      |+|+.++||.+.++.+..     ....++.+++.........   ....|++.     ++ +....++..+..+.+++++
T Consensus       185 dvi~~~~fG~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  255 (500)
T PLN02169        185 DTSSILMTGYDPMSLSIE-----MLEVEFGEAADIGEEAIYY---RHFKPVILWRLQNWI-GIGLERKMRTALATVNRMF  255 (500)
T ss_pred             HHHHhheeCCCccccCCC-----CCCCHHHHHHHHHHHHHHh---HHhccHHHHHHHHHh-CCchhhHHHHHHHHHHHHH
Confidence            999999999877643310     0111444444433322111   11233221     12 2234566778888999999


Q ss_pred             HHHHHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCCC-----CCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhC
Q 036575          275 SKIIEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDGE-----NRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLH  349 (528)
Q Consensus       275 ~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~-----~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~  349 (528)
                      .++|++++++.....    ..+....|+++.+++...+     ..++++++.+++.++++||+|||+++++|++|+|++|
T Consensus       256 ~~~I~~r~~~~~~~~----~~~~~~~d~l~~ll~~~~~~~~~~~~~~~~~i~~~~~~~l~AG~dTTa~tl~w~l~~La~~  331 (500)
T PLN02169        256 AKIISSRRKEEISRA----ETEPYSKDALTYYMNVDTSKYKLLKPKKDKFIRDVIFSLVLAGRDTTSSALTWFFWLLSKH  331 (500)
T ss_pred             HHHHHHHHHHhhccc----cccCCCcCHHHHHHhccccccccccCCChHHHHHHHHHHHHhchhHHHHHHHHHHHHHHCC
Confidence            999998876422110    0012246899999875321     2478999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeee-cceeeCCCCEEEEecccc
Q 036575          350 PDIQAKAQIEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQV-GQHLVPAGTTAMVNMWSI  428 (528)
Q Consensus       350 p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l-~g~~Ip~g~~v~~~~~~~  428 (528)
                      |++|+|+++||++++      +++++.+||||+|||+||||++|++|..  .|.+.+|.++ +||.||||+.|.+++|++
T Consensus       332 Pevq~kl~~Ei~~v~------~~~dl~~L~Yl~avi~EtLRl~P~vp~~--~r~~~~d~~~~~G~~IpkGt~v~i~~~~i  403 (500)
T PLN02169        332 PQVMAKIRHEINTKF------DNEDLEKLVYLHAALSESMRLYPPLPFN--HKAPAKPDVLPSGHKVDAESKIVICIYAL  403 (500)
T ss_pred             HHHHHHHHHHHHhhC------CHHHHhcCHHHHHHHHHHHhcCCCCCcC--ceecCCCCCccCCEEECCCCEEEEcHHHh
Confidence            999999999999874      5789999999999999999999999987  7877777665 999999999999999999


Q ss_pred             ccCCCCC-CCCCCCCCCCCCCcccccC-CCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCccc
Q 036575          429 THDEEVW-PEANEFKPERFLYEDVNIM-GSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSEC  506 (528)
Q Consensus       429 ~~d~~~~-~~p~~F~P~R~l~~~~~~~-~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~  506 (528)
                      ||||++| +||++|+||||++++.... .++..++|||+|+|+|+|++||++|+++++++|+++|++++.++.++  ...
T Consensus       404 hrd~~~w~~dP~~F~PeRfl~~~~~~~~~~~~~~lPFG~GpR~CiG~~~A~~e~k~~la~ll~~f~~~~~~~~~~--~~~  481 (500)
T PLN02169        404 GRMRSVWGEDALDFKPERWISDNGGLRHEPSYKFMAFNSGPRTCLGKHLALLQMKIVALEIIKNYDFKVIEGHKI--EAI  481 (500)
T ss_pred             hCCccccCCChhhcCccccCCCCCCccCCCCccccCCCCCCCCCcCHHHHHHHHHHHHHHHHHHCEEEEcCCCCc--ccc
Confidence            9999999 8999999999997543321 13578999999999999999999999999999999999998765433  335


Q ss_pred             ccceeeccCceeEEeeec
Q 036575          507 LKLSLEMKNSLVCKAVPR  524 (528)
Q Consensus       507 ~~~~~~~~~~~~~~~~~r  524 (528)
                      .+++++|+.++++++++|
T Consensus       482 ~~~~l~~~~gl~l~l~~~  499 (500)
T PLN02169        482 PSILLRMKHGLKVTVTKK  499 (500)
T ss_pred             cceEEecCCCEEEEEEeC
Confidence            567889999999999987


No 19 
>PLN03195 fatty acid omega-hydroxylase; Provisional
Probab=100.00  E-value=1.1e-73  Score=575.49  Aligned_cols=459  Identities=22%  Similarity=0.317  Sum_probs=350.2

Q ss_pred             CCCCCCCCCcccccchhhcCCchHHHHHHHHHhcC-CCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccccch
Q 036575           50 TAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFR-AKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKESAY  126 (528)
Q Consensus        50 ~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~-~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~~~  126 (528)
                      +.+|||+++|++||++.+..+  +..+.+|.++|. +|++|++++|+.++|+++||+++++|+.+  ..|.+++.+....
T Consensus        30 ~~~pgp~~~p~~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~~~~~~  107 (516)
T PLN03195         30 RNRKGPKSWPIIGAALEQLKN--YDRMHDWLVEYLSKDRTVVVKMPFTTYTYIADPVNVEHVLKTNFANYPKGEVYHSYM  107 (516)
T ss_pred             cccCCCCCCCeecchHHHHhc--cchHHHHHHHHhccCCcEEEeeCCCCceEecCHHHHHHHHhhCccccCCcHhHHHHH
Confidence            458999999999998766443  345677777772 26899999999999999999999999985  4565543332222


Q ss_pred             heeccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhH-HHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHHHH
Q 036575          127 ELLFHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFR-ETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMMS  205 (528)
Q Consensus       127 ~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~-~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~  205 (528)
                      ..++|.+++ +.+|+.|+++||.+ ++.|+.++++.+.+.+ ++.++.+++.+.+...+++++|+.++++.+++|+++.+
T Consensus       108 ~~~~g~~l~-~~~g~~w~~~Rr~l-~~~fs~~~l~~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~dvi~~~  185 (516)
T PLN03195        108 EVLLGDGIF-NVDGELWRKQRKTA-SFEFASKNLRDFSTVVFREYSLKLSSILSQASFANQVVDMQDLFMRMTLDSICKV  185 (516)
T ss_pred             HHHhcCeee-ccCcHHHHHHHHhc-chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEcHHHHHHHHHHHHHHHH
Confidence            334567775 45899999999999 8999999999999876 66778888878754445678999999999999999999


Q ss_pred             HHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 036575          206 VFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEEHKVKR  285 (528)
Q Consensus       206 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  285 (528)
                      +||.+++..+...     ....+.+.++........ .....++.+.++......++..+..+.+.+++.+.+++++++.
T Consensus       186 ~fG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  259 (516)
T PLN03195        186 GFGVEIGTLSPSL-----PENPFAQAFDTANIIVTL-RFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKAEM  259 (516)
T ss_pred             HhCCCccccccCC-----CccHHHHHHHHHHHHHHH-HHhcchhhHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999887544100     111344444333221100 0000011111110111223445566778888889998887654


Q ss_pred             hhcccCCCCCCCCCCcHHHHHhhcCCC--CCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHhHh
Q 036575          286 INKNINGGCCDVDEGDFVDVLLGLDGE--NRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEIDNT  363 (528)
Q Consensus       286 ~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~  363 (528)
                      .....   .++....|+++.+++...+  +.++++++.+++.++++||+|||+++++|++|+|++||++|+|+++|++++
T Consensus       260 ~~~~~---~~~~~~~d~l~~ll~~~~~~~~~l~~~~i~~~~~~ll~AG~dTTa~tl~~~l~~L~~~P~vq~kl~~Ei~~~  336 (516)
T PLN03195        260 DEARK---SGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKAL  336 (516)
T ss_pred             hcccc---ccccccccHHHHHHhccCCCCCCCCHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence            21100   0112356899999975432  369999999999999999999999999999999999999999999999998


Q ss_pred             hCC--------------------CCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeee-cceeeCCCCEEE
Q 036575          364 VGT--------------------ARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQV-GQHLVPAGTTAM  422 (528)
Q Consensus       364 ~~~--------------------~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l-~g~~Ip~g~~v~  422 (528)
                      .++                    +..++++++++||||+|||+||||++|++|..  +|.+.+|.++ +||.||||+.|.
T Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Lpyl~Avi~EtLRl~p~~p~~--~r~~~~d~~~~~G~~IpkGt~V~  414 (516)
T PLN03195        337 EKERAKEEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQD--PKGILEDDVLPDGTKVKAGGMVT  414 (516)
T ss_pred             hhcccccccccccchhhhhcccccCCCCHHHHhcCHHHHHHHHHHhhcCCCCcch--hhhhccCcCcCCCcEECCCCEEE
Confidence            642                    24578999999999999999999999999987  7878877666 999999999999


Q ss_pred             EeccccccCCCCC-CCCCCCCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCc
Q 036575          423 VNMWSITHDEEVW-PEANEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGV  501 (528)
Q Consensus       423 ~~~~~~~~d~~~~-~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~  501 (528)
                      ++.+++||||++| +||++|+||||++++......+..++|||+|+|+|+|++||++|++++++.|+++|++++.++.+.
T Consensus       415 ~~~~~~h~dp~~~g~dP~~F~PeRwl~~~~~~~~~~~~~~pFG~G~R~CiG~~lA~~e~~~~la~ll~~f~~~~~~~~~~  494 (516)
T PLN03195        415 YVPYSMGRMEYNWGPDAASFKPERWIKDGVFQNASPFKFTAFQAGPRICLGKDSAYLQMKMALALLCRFFKFQLVPGHPV  494 (516)
T ss_pred             EehHhhccChhhhccChhhcCCcccCCCCCcCCCCCceEeccCCCCCcCcCHHHHHHHHHHHHHHHHHhceeEecCCCcc
Confidence            9999999999999 999999999999643211224457999999999999999999999999999999999998765433


Q ss_pred             CCcccccceeeccCceeEEeeecc
Q 036575          502 DLSECLKLSLEMKNSLVCKAVPRF  525 (528)
Q Consensus       502 ~~~~~~~~~~~~~~~~~~~~~~r~  525 (528)
                        ......++.|+.++.|++++|+
T Consensus       495 --~~~~~~~~~~~~~~~v~~~~r~  516 (516)
T PLN03195        495 --KYRMMTILSMANGLKVTVSRRS  516 (516)
T ss_pred             --eeeeeeEEecCCCEEEEEEeCC
Confidence              3334456778899999999984


No 20 
>PLN02500 cytochrome P450 90B1
Probab=100.00  E-value=1.2e-73  Score=571.22  Aligned_cols=436  Identities=16%  Similarity=0.257  Sum_probs=338.1

Q ss_pred             cCCCCCCCCCCCCcccccchhhcC----CchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCC
Q 036575           46 TQTRTAIPGPSGLPILGMVLAFTG----SLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADR  119 (528)
Q Consensus        46 ~~~~~~~PgP~~~p~~G~~~~~~~----~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~  119 (528)
                      .++.+.||||+++|++||++.+.+    ...++.+.+++++|  |++|++++|+.++|+++||+++++++.+  ..|.++
T Consensus        34 ~~~~~~PPgp~~~PiiGn~~~~~~~~~~~~~~~~~~~~~~~y--G~v~~~~~g~~~~vvv~~p~~~~~vl~~~~~~f~~~  111 (490)
T PLN02500         34 QKRFNLPPGNMGWPFLGETIGYLKPYSATSIGEFMEQHISRY--GKIYRSNLFGEPTIVSADAGLNRFILQNEGRLFECS  111 (490)
T ss_pred             cCCCCCCCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHh--cccccccccCCCeEEecCHHHHHHHHhCCCCeEEee
Confidence            344678999999999999875532    23678899999999  8999999999999999999999999985  334433


Q ss_pred             Cccccchheecc-ceeeeCCCChHHHHHHhhhhccCCcHHHHhH-hHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHH
Q 036575          120 PVKESAYELLFH-RAIGFAPFGEYWRNLRRISGTHLFSPKRMSV-LGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFG  197 (528)
Q Consensus       120 ~~~~~~~~~~~g-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~  197 (528)
                      ... .... ..| .++++. +|+.|+++|+.+ .+.|++.+++. +.+.+++.+..+++.|.    +++.+|+.+.++++
T Consensus       112 ~~~-~~~~-~~g~~~~~~~-~g~~wr~~Rk~~-~~~f~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~vd~~~~~~~~  183 (490)
T PLN02500        112 YPR-SIGG-ILGKWSMLVL-VGDMHRDMRSIS-LNFLSHARLRTHLLKEVERHTLLVLDSWK----ENSTFSAQDEAKKF  183 (490)
T ss_pred             Cch-HHHH-HhCccccccc-CCHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHhC----CCCCEEehHHHHHH
Confidence            211 1112 234 356544 899999999999 79999999887 56777777777777663    34579999999999


Q ss_pred             HHHHHHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHH
Q 036575          198 SLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKI  277 (528)
Q Consensus       198 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~  277 (528)
                      ++|++++++||.+.+..+         ...+...+.+........  ...+|.       ...++..+..+.+.+++.+.
T Consensus       184 ~~~vi~~~~fg~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~~p~-------~~~~~~~~~~~~~~~~~~~~  245 (490)
T PLN02500        184 TFNLMAKHIMSMDPGEEE---------TEQLKKEYVTFMKGVVSA--PLNFPG-------TAYRKALKSRATILKFIERK  245 (490)
T ss_pred             HHHHHHHHHhCCCCCchH---------HHHHHHHHHHHHhhhhcc--hhcCCC-------cccHHHHHHHHHHHHHHHHH
Confidence            999999999998754211         012333333322221111  111221       11234455677888889999


Q ss_pred             HHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHH
Q 036575          278 IEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDGENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQ  357 (528)
Q Consensus       278 i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~  357 (528)
                      +++++++......     +....|+++.+++.   ..++++++.+++.++++||+|||+++++|++|+|++||++|+|+|
T Consensus       246 i~~~~~~~~~~~~-----~~~~~d~l~~ll~~---~~ls~~~i~~~~~~ll~AG~dTta~tl~~~l~~L~~~Pevq~kl~  317 (490)
T PLN02500        246 MEERIEKLKEEDE-----SVEEDDLLGWVLKH---SNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQELR  317 (490)
T ss_pred             HHHHHHhhhcccC-----CCCcchHHHHHHhc---cCCCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhhCHHHHHHHH
Confidence            9887765431110     02346899999974   258999999999999999999999999999999999999999999


Q ss_pred             HHHhHhhC-----CCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCC
Q 036575          358 IEIDNTVG-----TARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDE  432 (528)
Q Consensus       358 ~Ei~~~~~-----~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~  432 (528)
                      +|++++++     ++..++++++++|||++|||+||||++|++|.+  +|.+++|++++||.||||+.|.++.|++||||
T Consensus       318 ~Ei~~v~~~~~~~~~~~~~~~d~~~lpyl~avikEtlRl~P~~~~~--~R~~~~d~~~~G~~IPkGt~V~~~~~~~hrdp  395 (490)
T PLN02500        318 EEHLEIARAKKQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFL--HRKALKDVRYKGYDIPSGWKVLPVIAAVHLDS  395 (490)
T ss_pred             HHHHHHhhccccCCCCCCCHHHhccCHHHHHHHHHHHhcCCCccCe--eeEeCCCceeCCEEECCCCEEEechhhcccCc
Confidence            99999863     234589999999999999999999999999986  89999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCcccccC------CCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCccc
Q 036575          433 EVWPEANEFKPERFLYEDVNIM------GSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSEC  506 (528)
Q Consensus       433 ~~~~~p~~F~P~R~l~~~~~~~------~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~  506 (528)
                      ++|+||++|+||||++++....      ..+..++|||+|+|.|+|++||++|+++++++|+++|++++.++... ..  
T Consensus       396 ~~~~dP~~F~PeRfl~~~~~~~~~~~~~~~~~~~lpFG~G~R~CiG~~~A~~el~~~la~ll~~f~~~~~~~~~~-~~--  472 (490)
T PLN02500        396 SLYDQPQLFNPWRWQQNNNRGGSSGSSSATTNNFMPFGGGPRLCAGSELAKLEMAVFIHHLVLNFNWELAEADQA-FA--  472 (490)
T ss_pred             ccCCCccccChhhccCCCcccccccccCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHHHHHhccEEEEcCCCcc-ee--
Confidence            9999999999999997542211      13467999999999999999999999999999999999998776432 11  


Q ss_pred             ccceeeccCceeEEeee
Q 036575          507 LKLSLEMKNSLVCKAVP  523 (528)
Q Consensus       507 ~~~~~~~~~~~~~~~~~  523 (528)
                      ... ..++.+++|++++
T Consensus       473 ~~~-~~~~~~l~~~~~~  488 (490)
T PLN02500        473 FPF-VDFPKGLPIRVRR  488 (490)
T ss_pred             ccc-ccCCCCceEEEEe
Confidence            222 2456789998875


No 21 
>PF00067 p450:  Cytochrome P450 p450 superfamily signature b-class p450 signature mitochondrial p450 signature E-class p450 group I signature E-class p450 group II signature E-class p450 group IV signature;  InterPro: IPR001128 Cytochrome P450 enzymes are a superfamily of haem-containing mono-oxygenases that are found in all kingdoms of life, and which show extraordinary diversity in their reaction chemistry. In mammals, these proteins are found primarily in microsomes of hepatocytes and other cell types, where they oxidise steroids, fatty acids and xenobiotics, and are important for the detoxification and clearance of various compounds, as well as for hormone synthesis and breakdown, cholesterol synthesis and vitamin D metabolism. In plants, these proteins are important for the biosynthesis of several compounds such as hormones, defensive compounds and fatty acids. In bacteria, they are important for several metabolic processes, such as the biosynthesis of antibiotic erythromycin in Saccharopolyspora erythraea (Streptomyces erythraeus). Cytochrome P450 enzymes use haem to oxidise their substrates, using protons derived from NADH or NADPH to split the oxygen so a single atom can be added to a substrate. They also require electrons, which they receive from a variety of redox partners. In certain cases, cytochrome P450 can be fused to its redox partner to produce a bi-functional protein, such as with P450BM-3 from Bacillus megaterium [], which has haem and flavin domains. Organisms produce many different cytochrome P450 enzymes (at least 58 in humans), which together with alternative splicing can provide a wide array of enzymes with different substrate and tissue specificities. Individual cytochrome P450 proteins follow the nomenclature: CYP, followed by a number (family), then a letter (subfamily), and another number (protein); e.g. CYP3A4 is the fourth protein in family 3, subfamily A. In general, family members should share >40% identity, while subfamily members should share >55% identity. Cytochrome P450 proteins can also be grouped by two different schemes. One scheme was based on a taxonomic split: class I (prokaryotic/mitochondrial) and class II (eukaryotic microsomes). The other scheme was based on the number of components in the system: class B (3-components) and class E (2-components). These classes merge to a certain degree. Most prokaryotes and mitochondria (and fungal CYP55) have 3-component systems (class I/class B) - a FAD-containing flavoprotein (NAD(P)H-dependent reductase), an iron-sulphur protein and P450. Most eukaryotic microsomes have 2-component systems (class II/class E) - NADPH:P450 reductase (FAD and FMN-containing flavoprotein) and P450. There are exceptions to this scheme, such as 1-component systems that resemble class E enzymes [, , ]. The class E enzymes can be further subdivided into five sequence clusters, groups I-V, each of which may contain more than one cytochrome P450 family (eg, CYP1 and CYP2 are both found in group I). The divergence of the cytochrome P450 superfamily into B- and E-classes, and further divergence into stable clusters within the E-class, appears to be very ancient, occurring before the appearance of eukaryotes. More information about these proteins can be found at Protein of the Month: Cytochrome P450 [].; GO: 0005506 iron ion binding, 0009055 electron carrier activity, 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0020037 heme binding, 0055114 oxidation-reduction process; PDB: 2RFC_B 2RFB_A 3EJB_H 3EJE_H 3EJD_H 1N6B_A 1NR6_A 1DT6_A 3EL3_A 3DBG_B ....
Probab=100.00  E-value=1.1e-74  Score=581.30  Aligned_cols=449  Identities=30%  Similarity=0.507  Sum_probs=370.4

Q ss_pred             CCCCCCCcccccchhhcC-CchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhcc--ccCCCCccccchh-
Q 036575           52 IPGPSGLPILGMVLAFTG-SLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNSS--AFADRPVKESAYE-  127 (528)
Q Consensus        52 ~PgP~~~p~~G~~~~~~~-~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~~--~~~~~~~~~~~~~-  127 (528)
                      ||||+++|++||++.+.. ...++.+.+++++|  |+||++++++.++++|+||+++++|+.++  .+..++....... 
T Consensus         1 Ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~~ky--G~i~~~~~~~~~~vvv~~pe~~~~il~~~~~~~~~~~~~~~~~~~   78 (463)
T PF00067_consen    1 PPGPPPLPILGNLLQFRRKGNPHEFFRELHKKY--GPIFRIWPGGQPIVVVSDPELIKEILRSRSKYFSFRPRPPWFEIF   78 (463)
T ss_dssp             SSCSSSBTTTBTHHHHHTTHHHHHHHHHHHHHH--TSEEEEEETTEEEEEEESHHHHHHHHTTTTTTEEEEHCHHHHHHH
T ss_pred             CcCCCCcCceeEHHHhcCCCcHHHHHHHHHHHh--CCEEEEeEecccccccccchhhccccccccccccccccccccccc
Confidence            799999999999999983 34899999999999  89999999999999999999999999973  3444333223322 


Q ss_pred             --eeccceeeeCCCChHHHHHHhhhhccCCcHH-HHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHHH
Q 036575          128 --LLFHRAIGFAPFGEYWRNLRRISGTHLFSPK-RMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMM  204 (528)
Q Consensus       128 --~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~-~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  204 (528)
                        ...+.++++. +|+.|+.+|+.+ .+.|+.. .+ .+.+.+++.++++++.|......++.+|+.++++.+++|+++.
T Consensus        79 ~~~~~~~~l~~~-~~~~~~~~R~~~-~~~~~~~~~~-~~~~~i~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~d~i~~  155 (463)
T PF00067_consen   79 RGPFGGKGLFFS-DGERWRRQRRLL-APAFSSKKIL-KLEPLIDEEAEELIDQLRKKAGSSGPVDLFDWLRRFALDVIGR  155 (463)
T ss_dssp             HHHHTTTSSTTS-SHHHHHHHHHHH-HHHHSHHHHH-HHHHHHHHHHHHHHHHHHHTTTSESEEEHHHHHHHHHHHHHHH
T ss_pred             cccccccccccc-cccccccccccc-cccccccccc-ccccccccccccccccccccccccceeeeeccccccccccccc
Confidence              3456777554 779999999999 7888887 66 9999999999999999998876556899999999999999999


Q ss_pred             HHHhcccccCccccCCCCCCch-HHHHHHHHHHHhhccc--ccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHHH
Q 036575          205 SVFGRSYEFGEKCNYHDDDGSH-ELEGLVREGYELLGTF--NWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEEH  281 (528)
Q Consensus       205 ~~fG~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~  281 (528)
                      ++||.++++.+.       ... ++.+.+......+...  .+...+|++.++ +....++..+..+.+.+++.+.++++
T Consensus       156 ~~fG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~  227 (463)
T PF00067_consen  156 VLFGKDFGSLDD-------EDFEEFLEAFDELFELLSNFFWNLPFFFPWLKYL-PTPLFRRFKRARDRLRKYIKEIIEER  227 (463)
T ss_dssp             HHHSSHHHGTTH-------HHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCTS-SHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceeeeccc-------cccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccc
Confidence            999999875441       212 4566666665544221  244556766666 44566677778889999999999999


Q ss_pred             HHHhhhcccCCCCCCCCCCcHHHHHhhcC--CC--CCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHH
Q 036575          282 KVKRINKNINGGCCDVDEGDFVDVLLGLD--GE--NRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQ  357 (528)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~d~l~~ll~~~--~~--~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~  357 (528)
                      +++....       .....|+++.++...  .+  .+++++++..++..+++||+|||+++++|++++|++||++|+|++
T Consensus       228 ~~~~~~~-------~~~~~d~l~~ll~~~~~~~~~~~ls~~~i~~~~~~~~~ag~dtt~~~l~~~l~~L~~~P~~~~kl~  300 (463)
T PF00067_consen  228 REELDDG-------DESRRDLLDSLLQASSDSDGPSGLSDEEIAAELLTLLFAGHDTTASTLSWTLYELAKNPEVQEKLR  300 (463)
T ss_dssp             HHSHHSS-------SSSCSSHHHHHHHHHHTTTTTSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ccccccc-------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            8877521       135789999999875  22  279999999999999999999999999999999999999999999


Q ss_pred             HHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCCCC
Q 036575          358 IEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVWPE  437 (528)
Q Consensus       358 ~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~~~  437 (528)
                      +||+++.++++.++.+++++||||+|||+||||++|+++... +|.+++|++++||.||||+.|.++.+++|+||++|+|
T Consensus       301 ~Ei~~~~~~~~~~~~~~l~~l~yl~a~i~EtlRl~p~~~~~~-~R~~~~d~~l~g~~ip~gt~v~~~~~~~~~d~~~~~d  379 (463)
T PF00067_consen  301 EEIDSVLGDGREITFEDLSKLPYLDAVIKETLRLYPPVPFSL-PRVATEDVTLGGYFIPKGTIVIVSIYALHRDPEYFPD  379 (463)
T ss_dssp             HHHHHHTTTSSSHHHHHHGTGHHHHHHHHHHHHHSTSSSTEE-EEEESSSEEETTEEEETTSEEEEEHHHHTTSTTTSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            999999977778999999999999999999999999999332 8999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccCce
Q 036575          438 ANEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKNSL  517 (528)
Q Consensus       438 p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  517 (528)
                      |++|+||||++.+.........++|||.|+|.|+|++||++|+++++++|+++|++++.++.+..........+.|+.++
T Consensus       380 p~~F~P~R~~~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  459 (463)
T PF00067_consen  380 PDEFDPERFLDERGISNRPSFAFLPFGAGPRMCPGRNLAMMEMKVFLAKLLRRFDFELVPGSEPEPQEQQNGFLLPPKPL  459 (463)
T ss_dssp             TTS--TTGGBTTTSTBCSSSTTSSTTESSTTS-TTHHHHHHHHHHHHHHHHHHEEEEESTTSSGGEEECSCSSSEEESSS
T ss_pred             ccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHhCEEEECCCCCCCCccccCceEeeCCCc
Confidence            99999999998765223367789999999999999999999999999999999999997765444444332334566777


Q ss_pred             eEEe
Q 036575          518 VCKA  521 (528)
Q Consensus       518 ~~~~  521 (528)
                      .|.+
T Consensus       460 ~~~~  463 (463)
T PF00067_consen  460 KVKF  463 (463)
T ss_dssp             EEEE
T ss_pred             EEeC
Confidence            7764


No 22 
>PLN02738 carotene beta-ring hydroxylase
Probab=100.00  E-value=1.1e-72  Score=569.76  Aligned_cols=457  Identities=19%  Similarity=0.314  Sum_probs=355.2

Q ss_pred             CCCCCCCCCCc----------------ccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhh
Q 036575           49 RTAIPGPSGLP----------------ILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILN  112 (528)
Q Consensus        49 ~~~~PgP~~~p----------------~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~  112 (528)
                      ...+|||+...                .+||+..+.+.+.+..+.+||++|  |+||++++|+.++|+|+||+.+++||.
T Consensus       114 ~~~~pgp~laa~t~~ye~y~~~~~~~~~~G~l~~i~~g~~~~~l~~lh~kY--GpI~ri~lGp~~~vvIsDpe~i~eIl~  191 (633)
T PLN02738        114 KLGPPGELLAFLFTWVEAGEGYPKIPEAKGSISAVRGEAFFIPLYELFLTY--GGIFRLTFGPKSFLIVSDPSIAKHILR  191 (633)
T ss_pred             hCCCCCchHHHHHcccccccccccCccccCcHHHhcCchHHHHHHHHHHHh--CCEEEEEeCCCCEEEECCHHHHHHHHh
Confidence            45788887421                245656665555889999999999  899999999999999999999999998


Q ss_pred             c--cccCCCCccccchheeccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEe
Q 036575          113 S--SAFADRPVKESAYELLFHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEV  190 (528)
Q Consensus       113 ~--~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~  190 (528)
                      +  ..|.+++.. .......+.+++ ..+|+.|+.+|+.+ .+.|+.+.++.+.+.+++.+++++++|.+...+++++|+
T Consensus       192 ~~~~~f~k~~~~-~~~~~~~g~~l~-~~dge~wr~rRr~l-~p~Fs~~~v~~l~~~i~~~v~~L~~~L~~~~~~g~~vdl  268 (633)
T PLN02738        192 DNSKAYSKGILA-EILEFVMGKGLI-PADGEIWRVRRRAI-VPALHQKYVAAMISLFGQASDRLCQKLDAAASDGEDVEM  268 (633)
T ss_pred             hCcccCCCcchH-HHHhhccCCcee-cCCcHHHHHHHHhc-cHhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeH
Confidence            5  446655332 222333456765 45899999999999 899999999999999999999999999876656778999


Q ss_pred             hHHHHHHHHHHHHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhccccc----ccccccccccchhhHHHHHHHH
Q 036575          191 RKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNW----SDHFPVLSWFDLQGVRKRCRKL  266 (528)
Q Consensus       191 ~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~P~l~~~~~~~~~~~~~~~  266 (528)
                      .+.+..+++|+|+.++||.+++....       . ..+.+.+............    ...+|++..+  ....++..+.
T Consensus       269 ~~~~~~lt~DVI~~~~FG~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l--~~~~~~~~~~  338 (633)
T PLN02738        269 ESLFSRLTLDIIGKAVFNYDFDSLSN-------D-TGIVEAVYTVLREAEDRSVSPIPVWEIPIWKDI--SPRQRKVAEA  338 (633)
T ss_pred             HHHHHHHHHHHHHHHHhCCCcccccc-------c-hHHHHHHHHHHHHHHHHhhcchhhhhhhHHhhh--chHHHHHHHH
Confidence            99999999999999999998875431       1 1233333332221111011    1112322222  1123444555


Q ss_pred             hhhHHHHHHHHHHHHHHHhhhcccC--CCCCCCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHH
Q 036575          267 VGKVNSFVSKIIEEHKVKRINKNIN--GGCCDVDEGDFVDVLLGLDGENRLTDSDMIAVLWEMIFRGTDTVAILLEWILA  344 (528)
Q Consensus       267 ~~~l~~~~~~~i~~~~~~~~~~~~~--~~~~~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~  344 (528)
                      .+.+..+...+++.+++..+.....  ....+....|+++.|++..  ..++++++.+++.++++||+|||+.+++|++|
T Consensus       339 ~~~l~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~dil~~Ll~~~--~~ls~~~L~~e~~~ll~AG~eTTA~tLt~~l~  416 (633)
T PLN02738        339 LKLINDTLDDLIAICKRMVEEEELQFHEEYMNERDPSILHFLLASG--DDVSSKQLRDDLMTMLIAGHETSAAVLTWTFY  416 (633)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccchhcccccccchHHHHHHHcC--CCCCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence            6666677777776554432211100  0001123468999998753  35899999999999999999999999999999


Q ss_pred             HHhhChHHHHHHHHHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEe
Q 036575          345 RMVLHPDIQAKAQIEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVN  424 (528)
Q Consensus       345 ~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~  424 (528)
                      +|++||++|+|||+|++++++ +..++++++++||||+|||+|+|||+|+++.+  +|++.+|.+++||.||+||.|.++
T Consensus       417 ~L~~~Pevq~kLreEl~~v~~-~~~~t~edL~kLPYL~AVIkEtLRL~p~~p~~--~R~a~~d~~i~gy~IPkGT~V~~s  493 (633)
T PLN02738        417 LLSKEPSVVAKLQEEVDSVLG-DRFPTIEDMKKLKYTTRVINESLRLYPQPPVL--IRRSLENDMLGGYPIKRGEDIFIS  493 (633)
T ss_pred             HHHhCHHHHHHHHHHHHHhcC-CCCCCHHHHccCHHHHHHHHHHHhcCCCcccc--ceeeccCceECCEEECCCCEEEec
Confidence            999999999999999999988 46789999999999999999999999999986  899999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCCCCCCCCccc--ccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcC
Q 036575          425 MWSITHDEEVWPEANEFKPERFLYEDV--NIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVD  502 (528)
Q Consensus       425 ~~~~~~d~~~~~~p~~F~P~R~l~~~~--~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~  502 (528)
                      .|.+||||++||||++|+||||+.++.  ........++|||.|+|.|+|++||++|++++|+.|+++|+|++.++.+ +
T Consensus       494 ~~~ihrdp~ifpdP~~F~PERWl~~~~~~~~~~~~~~~vpFG~G~R~CiG~~lA~~El~l~LA~Llr~F~~el~~~~~-~  572 (633)
T PLN02738        494 VWNLHRSPKHWDDAEKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASFENVVATAMLVRRFDFQLAPGAP-P  572 (633)
T ss_pred             HHHHhCCccccCCccccCcccCCCCCCCccccCCCCceeCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCeeEeCCCCC-C
Confidence            999999999999999999999985321  1112456799999999999999999999999999999999999876642 3


Q ss_pred             CcccccceeeccCceeEEeeeccC
Q 036575          503 LSECLKLSLEMKNSLVCKAVPRFF  526 (528)
Q Consensus       503 ~~~~~~~~~~~~~~~~~~~~~r~~  526 (528)
                      +....+.++.|+.++.|++++|.+
T Consensus       573 ~~~~~~~~~~p~~~l~v~l~~R~~  596 (633)
T PLN02738        573 VKMTTGATIHTTEGLKMTVTRRTK  596 (633)
T ss_pred             cccccceEEeeCCCcEEEEEECCC
Confidence            344456778888999999999965


No 23 
>PLN02774 brassinosteroid-6-oxidase
Probab=100.00  E-value=1.8e-72  Score=558.16  Aligned_cols=425  Identities=17%  Similarity=0.249  Sum_probs=338.5

Q ss_pred             CCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccccch
Q 036575           49 RTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKESAY  126 (528)
Q Consensus        49 ~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~~~  126 (528)
                      ...||||+++|++||++.+..+ +..++.+++++|  |++|++++|+.++++|+||+++++++.+  ..|.++.. ....
T Consensus        30 ~~~ppgp~~~P~~G~~~~~~~~-~~~~~~~~~~~y--G~i~~~~~g~~~~v~i~~p~~~~~il~~~~~~~~~~~~-~~~~  105 (463)
T PLN02774         30 KGLPPGTMGWPLFGETTEFLKQ-GPDFMKNQRLRY--GSFFKSHILGCPTIVSMDPELNRYILMNEGKGLVPGYP-QSML  105 (463)
T ss_pred             CCCCCCCCCCCchhhHHHHHHh-hHHHHHHHHHHh--ccCccceecCCCeEEEeCHHHHHHHHcCCCCeEEecCC-HHHH
Confidence            3567899999999999888666 678999999999  8999999999999999999999999985  33322211 2222


Q ss_pred             heecc-ceeeeCCCChHHHHHHhhhhccCCcHHHHhH-hHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHHH
Q 036575          127 ELLFH-RAIGFAPFGEYWRNLRRISGTHLFSPKRMSV-LGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMM  204 (528)
Q Consensus       127 ~~~~g-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~-~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~  204 (528)
                      . .+| .+++ +.+|+.|+.+|+.+ .+.|++..++. +.+.+.+.+++++++|.    .++++|+.+.+..+++++++.
T Consensus       106 ~-~lg~~~~~-~~~g~~w~~~R~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~  178 (463)
T PLN02774        106 D-ILGTCNIA-AVHGSTHRYMRGSL-LSLISPTMIRDHLLPKIDEFMRSHLSGWD----GLKTIDIQEKTKEMALLSALK  178 (463)
T ss_pred             H-HhCccchh-hcCCHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHHHHHhhC----CCCCEEeeHHHHHHHHHHHHH
Confidence            2 234 3554 45899999999999 78999999886 78998888888888774    235799999999999999999


Q ss_pred             HHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 036575          205 SVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEEHKVK  284 (528)
Q Consensus       205 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~  284 (528)
                      ++||...+...          ..+...+...   .....   .+|.  +++ ....++..++.+.+.+++.+.++++++.
T Consensus       179 ~~~g~~~~~~~----------~~~~~~~~~~---~~~~~---~~~~--~lp-~~~~~~~~~~~~~~~~~~~~~i~~r~~~  239 (463)
T PLN02774        179 QIAGTLSKPIS----------EEFKTEFFKL---VLGTL---SLPI--DLP-GTNYRSGVQARKNIVRMLRQLIQERRAS  239 (463)
T ss_pred             HHcCCCChHHH----------HHHHHHHHHH---hcccc---cCCc--CCC-ChhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            99997543111          0222222221   11110   1121  221 1223455567788888898888887643


Q ss_pred             hhhcccCCCCCCCCCCcHHHHHhhcCCC-CCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHhHh
Q 036575          285 RINKNINGGCCDVDEGDFVDVLLGLDGE-NRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEIDNT  363 (528)
Q Consensus       285 ~~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~  363 (528)
                      .           ....|+++.+++...+ ..++++|+.+++.++++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       240 ~-----------~~~~d~l~~ll~~~~~~~~~s~~ei~~~~~~ll~Ag~dTt~~~l~w~l~~L~~~P~~q~kl~~Ei~~~  308 (463)
T PLN02774        240 G-----------ETHTDMLGYLMRKEGNRYKLTDEEIIDQIITILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAI  308 (463)
T ss_pred             C-----------CCcccHHHHHHhCccCCCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence            1           3457999999874433 258999999999999999999999999999999999999999999999999


Q ss_pred             hCC---CCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCCCCCCC
Q 036575          364 VGT---ARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVWPEANE  440 (528)
Q Consensus       364 ~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~  440 (528)
                      .+.   +..++++++++||||+|||+|+||++|+++.+  +|.+.+|++++||.||||+.|.++.+++||||++|+||++
T Consensus       309 ~~~~~~~~~~~~~~l~~lpyl~a~ikE~lRl~P~v~~~--~R~~~~d~~l~g~~IpkGt~v~~~~~~~~rdp~~~~dP~~  386 (463)
T PLN02774        309 RERKRPEDPIDWNDYKSMRFTRAVIFETSRLATIVNGV--LRKTTQDMELNGYVIPKGWRIYVYTREINYDPFLYPDPMT  386 (463)
T ss_pred             HhccCCCCCCCHHHHhcCcHHHHHHHHHHhcCCCCCCc--ccccCCCeeECCEEECCCCEEEEehHHhcCCcccCCChhc
Confidence            863   35689999999999999999999999999976  8999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccCceeEE
Q 036575          441 FKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKNSLVCK  520 (528)
Q Consensus       441 F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  520 (528)
                      |+||||++++..   ....++|||+|+|.|||++||++|++++++.|+++|++++.++.++..    ..++.|+++++|+
T Consensus       387 F~PeRfl~~~~~---~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~Ll~~f~~~~~~~~~~~~----~~~~~p~~g~~~~  459 (463)
T PLN02774        387 FNPWRWLDKSLE---SHNYFFLFGGGTRLCPGKELGIVEISTFLHYFVTRYRWEEVGGDKLMK----FPRVEAPNGLHIR  459 (463)
T ss_pred             cCchhcCCCCcC---CCccccCcCCCCCcCCcHHHHHHHHHHHHHHHHHhceEEECCCCcccc----CCCCCCCCCceEE
Confidence            999999975421   123699999999999999999999999999999999999977643221    1134578899999


Q ss_pred             eee
Q 036575          521 AVP  523 (528)
Q Consensus       521 ~~~  523 (528)
                      ++|
T Consensus       460 ~~~  462 (463)
T PLN02774        460 VSP  462 (463)
T ss_pred             eee
Confidence            885


No 24 
>PLN02196 abscisic acid 8'-hydroxylase
Probab=100.00  E-value=1.6e-72  Score=558.04  Aligned_cols=429  Identities=19%  Similarity=0.308  Sum_probs=345.1

Q ss_pred             ccCCCCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhccccCCCCcccc
Q 036575           45 STQTRTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNSSAFADRPVKES  124 (528)
Q Consensus        45 ~~~~~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~~~~~~~~~~~~  124 (528)
                      +.+..+.||||+++|++||++.+....++.++.+++++|  |++|++++++.++|+++||+++++++.++....++....
T Consensus        30 ~~~~~~~Ppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~~~~~~v~v~~p~~~~~vl~~~~~~~~~~~~~  107 (463)
T PLN02196         30 SSTKLPLPPGTMGWPYVGETFQLYSQDPNVFFASKQKRY--GSVFKTHVLGCPCVMISSPEAAKFVLVTKSHLFKPTFPA  107 (463)
T ss_pred             CCCCCCCCCCCCCCCccchHHHHHhcCHHHHHHHHHHHh--hhhheeeecCCceEEEcCHHHHHHHHhCCCCcccccCch
Confidence            444567888888899999998765444899999999999  899999999999999999999999998622111333322


Q ss_pred             chheecc-ceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHH
Q 036575          125 AYELLFH-RAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVM  203 (528)
Q Consensus       125 ~~~~~~g-~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~  203 (528)
                      ......| .++++ .+|+.|+++|+++ .+.|++++++.+.+.++++++++++.|.     ++.+|+.++++.+++++++
T Consensus       108 ~~~~~~g~~~l~~-~~g~~w~~~Rk~l-~~~f~~~~l~~~~~~i~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~v~~  180 (463)
T PLN02196        108 SKERMLGKQAIFF-HQGDYHAKLRKLV-LRAFMPDAIRNMVPDIESIAQESLNSWE-----GTQINTYQEMKTYTFNVAL  180 (463)
T ss_pred             HHHHHcCcccccc-cCcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHcCC-----CCeEEeHHHHHHHHHHHHH
Confidence            2333445 45644 5899999999999 7899999999999999999999998873     4579999999999999999


Q ss_pred             HHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHHHHH
Q 036575          204 MSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEEHKV  283 (528)
Q Consensus       204 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~  283 (528)
                      .++||.+.....          ..+.+.....    ..  ....+|+.  + +....++..++.+.+.+++.+.++++++
T Consensus       181 ~~~fG~~~~~~~----------~~~~~~~~~~----~~--~~~~~~~~--~-p~~~~~~~~~a~~~~~~~~~~~i~~~~~  241 (463)
T PLN02196        181 LSIFGKDEVLYR----------EDLKRCYYIL----EK--GYNSMPIN--L-PGTLFHKSMKARKELAQILAKILSKRRQ  241 (463)
T ss_pred             HHHcCCCCchHH----------HHHHHHHHHH----hc--chhccccc--C-CCccchHHHHHHHHHHHHHHHHHHHHhh
Confidence            999997643111          0222211111    11  01122321  1 1122345567778888888888887764


Q ss_pred             HhhhcccCCCCCCCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHhHh
Q 036575          284 KRINKNINGGCCDVDEGDFVDVLLGLDGENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEIDNT  363 (528)
Q Consensus       284 ~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~  363 (528)
                      +.           ....|+++.+++.  .++++++++.+++.++++||+|||+++++|++++|++||++|+|+++|++++
T Consensus       242 ~~-----------~~~~d~l~~ll~~--~~~l~~~ei~~~~~~~~~Ag~dTta~~l~~~l~~L~~~P~vq~kl~~Ei~~~  308 (463)
T PLN02196        242 NG-----------SSHNDLLGSFMGD--KEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLAENPSVLEAVTEEQMAI  308 (463)
T ss_pred             cC-----------CCcccHHHHHHhc--CCCCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence            32           3457899998863  2469999999999999999999999999999999999999999999999998


Q ss_pred             hCC---CCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCCCCCCC
Q 036575          364 VGT---ARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVWPEANE  440 (528)
Q Consensus       364 ~~~---~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~  440 (528)
                      .+.   +..++++++++||||+|||+|+||++|+++..  .|.+.+|++++||.||||+.|.++.+++||||++|+||++
T Consensus       309 ~~~~~~~~~~~~~~~~~l~yl~avi~EtlRl~p~~~~~--~R~~~~d~~i~g~~IpkGt~v~~~~~~~~rd~~~~~dP~~  386 (463)
T PLN02196        309 RKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFT--FREAVEDVEYEGYLIPKGWKVLPLFRNIHHSADIFSDPGK  386 (463)
T ss_pred             hcccccCCCCCHHHHhcChHHHHHHHHHHhcCCCcccc--ceeeccccccCCEEeCCCCEEEeeHHHhcCCchhcCCcCc
Confidence            863   35688999999999999999999999999987  7999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccCceeEE
Q 036575          441 FKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKNSLVCK  520 (528)
Q Consensus       441 F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  520 (528)
                      |+||||+++.     .+..++|||.|+|.|+|+++|++|++++++.|+++|++++.++. .++  .+..+..|++.+.|+
T Consensus       387 F~PeRfl~~~-----~~~~~lpFG~G~r~C~G~~~A~~e~~~~la~ll~~f~~~~~~~~-~~~--~~~~~~~p~~~~~~~  458 (463)
T PLN02196        387 FDPSRFEVAP-----KPNTFMPFGNGTHSCPGNELAKLEISVLIHHLTTKYRWSIVGTS-NGI--QYGPFALPQNGLPIA  458 (463)
T ss_pred             cChhhhcCCC-----CCCcccCcCCCCCCCchHHHHHHHHHHHHHHHHHhcEEEEcCCC-Cce--EEcccccCCCCceEE
Confidence            9999999632     34679999999999999999999999999999999999987653 233  344455688899998


Q ss_pred             eeec
Q 036575          521 AVPR  524 (528)
Q Consensus       521 ~~~r  524 (528)
                      ++.+
T Consensus       459 ~~~~  462 (463)
T PLN02196        459 LSRK  462 (463)
T ss_pred             EecC
Confidence            8754


No 25 
>PLN02302 ent-kaurenoic acid oxidase
Probab=100.00  E-value=4e-71  Score=555.95  Aligned_cols=442  Identities=20%  Similarity=0.297  Sum_probs=347.1

Q ss_pred             cccCCCCCCCCCCCCcccccchhhc----CCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc-cccCC
Q 036575           44 FSTQTRTAIPGPSGLPILGMVLAFT----GSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS-SAFAD  118 (528)
Q Consensus        44 ~~~~~~~~~PgP~~~p~~G~~~~~~----~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~-~~~~~  118 (528)
                      ......+.||||+++|++||++.+.    ...+++++.+++++||..++|++++++.++|+++||+++++|+.+ +.|.+
T Consensus        36 ~~~~~~~lpPgp~~~PilG~l~~~~~~~~~~~~~~~~~~~~~kyG~~~i~~~~~~~~~~vvv~~pe~~~~vl~~~~~f~~  115 (490)
T PLN02302         36 LGEGQPPLPPGDLGWPVIGNMWSFLRAFKSSNPDSFIASFISRYGRTGIYKAFMFGQPTVLVTTPEACKRVLTDDDAFEP  115 (490)
T ss_pred             hccCCCCCcCCCCCCCccccHHHHHHhcccCCcHHHHHHHHHHhCCCcceeeecCCCCeEEEcCHHHHHHHHcCCCcccc
Confidence            3445567899999999999998874    223788999999999321389999999999999999999999986 44544


Q ss_pred             CCccccchheeccceeeeCCCChHHHHHHhhhhccCC-cHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHH
Q 036575          119 RPVKESAYELLFHRAIGFAPFGEYWRNLRRISGTHLF-SPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFG  197 (528)
Q Consensus       119 ~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~  197 (528)
                      +.... ... .+|.+.+...+|+.|+++|+.+ .+.| ++++++.+.+.+++.++++++.+..    ++.+|+.+.++.+
T Consensus       116 ~~~~~-~~~-~~g~~~~~~~~g~~w~~~R~~~-~~~f~~~~~l~~~~~~i~~~v~~~~~~~~~----~~~v~~~~~~~~~  188 (490)
T PLN02302        116 GWPES-TVE-LIGRKSFVGITGEEHKRLRRLT-AAPVNGPEALSTYIPYIEENVKSCLEKWSK----MGEIEFLTELRKL  188 (490)
T ss_pred             CCchh-HHH-HhccccccccCcHHHHHHHHHH-HhccCCHHHHHHHHHHHHHHHHHHHHHhcC----CCCEehHHHHHHH
Confidence            32221 112 3454433445899999999999 6777 5788999999999999999988842    3569999999999


Q ss_pred             HHHHHHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHH
Q 036575          198 SLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKI  277 (528)
Q Consensus       198 ~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~  277 (528)
                      ++++++.++||.+++...          ..+...+..........  ...+|.       ....+..+..+.+.+++.+.
T Consensus       189 ~~~vi~~~~~G~~~~~~~----------~~~~~~~~~~~~~~~~~--~~~~p~-------~~~~~~~~~~~~l~~~~~~~  249 (490)
T PLN02302        189 TFKIIMYIFLSSESELVM----------EALEREYTTLNYGVRAM--AINLPG-------FAYHRALKARKKLVALFQSI  249 (490)
T ss_pred             HHHHHHHHHcCCCChHHH----------HHHHHHHHHHHHHhhhC--CcCCCc-------hhhHHHHHHHHHHHHHHHHH
Confidence            999999999998754211          02222222211111110  011121       11233445667788899999


Q ss_pred             HHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCCC--CCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHH
Q 036575          278 IEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDGE--NRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAK  355 (528)
Q Consensus       278 i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~--~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~  355 (528)
                      ++++++......      .....|+++.+++...+  ..++++++.+++..+++||+|||+++++|++++|++||++|+|
T Consensus       250 i~~~~~~~~~~~------~~~~~d~l~~ll~~~~~~~~~~~~~~i~~~~~~~~~Ag~dtta~~l~~~l~~L~~~P~~~~k  323 (490)
T PLN02302        250 VDERRNSRKQNI------SPRKKDMLDLLLDAEDENGRKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQK  323 (490)
T ss_pred             HHHHHHhhhccC------CCCcCCHHHHHHhhhccCCCCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            988875532110      02457999999986433  3589999999999999999999999999999999999999999


Q ss_pred             HHHHHhHhhCCC----CCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccC
Q 036575          356 AQIEIDNTVGTA----RLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHD  431 (528)
Q Consensus       356 l~~Ei~~~~~~~----~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d  431 (528)
                      +++|+++++++.    ..++++++++||||+|||+|+||++|+++..  +|.+++|++++||.||||+.|.++.+++|||
T Consensus       324 l~~E~~~v~~~~~~~~~~~~~~~l~~lpyl~a~i~E~lRl~p~~~~~--~R~~~~d~~~~g~~Ip~Gt~v~~~~~~~~rd  401 (490)
T PLN02302        324 AKAEQEEIAKKRPPGQKGLTLKDVRKMEYLSQVIDETLRLINISLTV--FREAKTDVEVNGYTIPKGWKVLAWFRQVHMD  401 (490)
T ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHhcChHHHHHHHHHHHhCCCcccc--hhcccCCEeECCEEECCCCEEEeeHHHhcCC
Confidence            999999998642    2378899999999999999999999999986  8999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCccccccee
Q 036575          432 EEVWPEANEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSL  511 (528)
Q Consensus       432 ~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  511 (528)
                      |++|+||++|+||||++++.    .+..++|||+|+|.|+|++||.+|++++++.|+++|++++.++. .++.  ...+.
T Consensus       402 ~~~~~dP~~F~PeR~~~~~~----~~~~~~pFG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~-~~~~--~~~~~  474 (490)
T PLN02302        402 PEVYPNPKEFDPSRWDNYTP----KAGTFLPFGLGSRLCPGNDLAKLEISIFLHHFLLGYRLERLNPG-CKVM--YLPHP  474 (490)
T ss_pred             cccCCCccccChhhcCCCCC----CCCCccCCCCCCcCCCcHHHHHHHHHHHHHHHHhcCeeEEcCCC-Ccce--eCCCC
Confidence            99999999999999996432    45679999999999999999999999999999999999987653 2222  22336


Q ss_pred             eccCceeEEeeeccC
Q 036575          512 EMKNSLVCKAVPRFF  526 (528)
Q Consensus       512 ~~~~~~~~~~~~r~~  526 (528)
                      +|.+++++++++|.+
T Consensus       475 ~p~~~~~~~~~~~~~  489 (490)
T PLN02302        475 RPKDNCLARITKVAS  489 (490)
T ss_pred             CCCCCceEEEEeccC
Confidence            788899999999875


No 26 
>PLN03141 3-epi-6-deoxocathasterone 23-monooxygenase; Provisional
Probab=100.00  E-value=2.1e-70  Score=542.30  Aligned_cols=436  Identities=22%  Similarity=0.255  Sum_probs=340.5

Q ss_pred             CCCCCCCCCCCcccccchhhcC----CchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCc
Q 036575           48 TRTAIPGPSGLPILGMVLAFTG----SLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPV  121 (528)
Q Consensus        48 ~~~~~PgP~~~p~~G~~~~~~~----~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~  121 (528)
                      +.+.||||.++|++||++.+.+    ..++.++.+|+++|  |+||++++|+.++|+++||+++++++.+  ..|..+. 
T Consensus         5 ~~~~Ppg~~~~P~iG~~~~l~~~~~~~~~~~~~~~~~~~y--G~i~~~~lg~~~~vvv~~p~~~~~vl~~~~~~~~~~~-   81 (452)
T PLN03141          5 KSRLPKGSLGWPVIGETLDFISCAYSSRPESFMDKRRSLY--GKVFKSHIFGTPTIVSTDAEVNKVVLQSDGNAFVPAY-   81 (452)
T ss_pred             CCCCCCCCCCCCchhhHHHHHhhcccCChHHHHHHHHHHh--hheeeeccCCCCEEEEeCHHHhhHHHhCCCCeeeccC-
Confidence            4567889999999999998742    23889999999999  8999999999999999999999999986  3444332 


Q ss_pred             cccchheeccc-eeeeCCCChHHHHHHhhhhccCCcHHHHhHh-HhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHH
Q 036575          122 KESAYELLFHR-AIGFAPFGEYWRNLRRISGTHLFSPKRMSVL-GKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSL  199 (528)
Q Consensus       122 ~~~~~~~~~g~-~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~-~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~  199 (528)
                       ......++|. +++ ..+|+.|+++|+++ .+.|+...++.+ .+.+.+.++++++.+.    +++++|+.+.+..+++
T Consensus        82 -~~~~~~l~g~~~~~-~~~g~~wr~~r~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  154 (452)
T PLN03141         82 -PKSLTELMGKSSIL-LINGSLQRRVHGLI-GAFLKSPHLKAQITRDMERYVSESLDSWR----DDPPVLVQDETKKIAF  154 (452)
T ss_pred             -chhHHHHhCccccc-ccCcHHHHHHHHHH-HHhcCcHHHHHHHHHHHHHHHHHHHHhcc----CCCCEEhHHHHHHHHH
Confidence             1122233453 454 45899999999999 788887777653 4566666665555542    3567999999999999


Q ss_pred             HHHHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHH
Q 036575          200 NSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIE  279 (528)
Q Consensus       200 ~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  279 (528)
                      +++++++||.+.+...          .++...+.........      +|+  +++ .....+..++.+.+.+++...|+
T Consensus       155 ~vi~~~~~G~~~~~~~----------~~~~~~~~~~~~~~~~------~~~--~~p-~~~~~~~~~~~~~l~~~~~~~i~  215 (452)
T PLN03141        155 EVLVKALISLEPGEEM----------EFLKKEFQEFIKGLMS------LPI--KLP-GTRLYRSLQAKKRMVKLVKKIIE  215 (452)
T ss_pred             HHHHHHHcCCCchHHH----------HHHHHHHHHHhhhHHh------Ccc--CCC-chHhHHHHHHHHHHHHHHHHHHH
Confidence            9999999997653210          1233333333222111      121  111 11123445667889999999999


Q ss_pred             HHHHHhhhcccCCCCCCCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHH
Q 036575          280 EHKVKRINKNINGGCCDVDEGDFVDVLLGLDGENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIE  359 (528)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~E  359 (528)
                      ++++........   ......|+++.+++.. +..++++++..++.++++||+|||+.+++|++++|++||++|+++++|
T Consensus       216 ~~~~~~~~~~~~---~~~~~~d~l~~ll~~~-~~~l~~~~i~~~~~~ll~Ag~dTts~tl~~~~~~L~~~P~v~~kl~~E  291 (452)
T PLN03141        216 EKRRAMKNKEED---ETGIPKDVVDVLLRDG-SDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEE  291 (452)
T ss_pred             HHHHHHhccCcc---ccCChhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhChHHHHHHHHH
Confidence            887654211000   0012468999999764 346899999999999999999999999999999999999999999999


Q ss_pred             HhHhhC----CCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCC
Q 036575          360 IDNTVG----TARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVW  435 (528)
Q Consensus       360 i~~~~~----~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~  435 (528)
                      ++++.+    .+..++++++.+||||+|||+|++|++|+++.+  +|.+.+|++++||.||||+.|.++.+++||||++|
T Consensus       292 i~~~~~~~~~~~~~~~~~~~~~lpyl~avi~E~lRl~p~~~~~--~R~~~~d~~l~g~~IPkG~~V~~~~~~~~~d~~~~  369 (452)
T PLN03141        292 NMKLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGV--MRKAMKDVEIKGYLIPKGWCVLAYFRSVHLDEENY  369 (452)
T ss_pred             HHHHHhccCCCCCCCCHHHHhccHHHHHHHHHHHhccCCcCCc--ceeecCCeeECCEEECCCCEEEEehHhccCCchhc
Confidence            998763    244578899999999999999999999999866  89999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccC
Q 036575          436 PEANEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKN  515 (528)
Q Consensus       436 ~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  515 (528)
                      +||++|+||||++++.    .+..++|||+|+|.|+|++||++|++++++.|+++|++++.++...     ...+++|..
T Consensus       370 ~dP~~F~PeRfl~~~~----~~~~~~pFG~G~R~C~G~~lA~~el~~~la~ll~~f~~~~~~~~~~-----~~~~~~~~~  440 (452)
T PLN03141        370 DNPYQFNPWRWQEKDM----NNSSFTPFGGGQRLCPGLDLARLEASIFLHHLVTRFRWVAEEDTIV-----NFPTVRMKR  440 (452)
T ss_pred             CCccccCcccccCCCC----CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhcCeeecCCCCee-----ecccccCCC
Confidence            9999999999997532    3567999999999999999999999999999999999998765321     124678889


Q ss_pred             ceeEEeeeccCC
Q 036575          516 SLVCKAVPRFFL  527 (528)
Q Consensus       516 ~~~~~~~~r~~~  527 (528)
                      ++.|++++|+-+
T Consensus       441 ~~~~~~~~~~~~  452 (452)
T PLN03141        441 KLPIWVTRIDDS  452 (452)
T ss_pred             CceEEEEeCCCC
Confidence            999999999753


No 27 
>PLN02426 cytochrome P450, family 94, subfamily C protein
Probab=100.00  E-value=4.2e-70  Score=542.72  Aligned_cols=441  Identities=17%  Similarity=0.244  Sum_probs=348.0

Q ss_pred             CcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccccchheeccceee
Q 036575           58 LPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKESAYELLFHRAIG  135 (528)
Q Consensus        58 ~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~~~~~~~g~~~~  135 (528)
                      .++.|++.....+ .++.+.++.++++ +.+++++.++.  ++++||+++++|+..  ..|.+...+.......+|+|++
T Consensus        49 ~~~~g~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~--iv~~dpe~i~~vl~~~~~~~~k~~~~~~~~~~~~g~gi~  124 (502)
T PLN02426         49 AYLTASWAKDFDN-LCDWYAHLLRRSP-TGTIHVHVLGN--TITANPENVEYMLKTRFDNYPKGKPFSAILGDLLGRGIF  124 (502)
T ss_pred             CCccHHHHHhccc-HHHHHHHHHHhCC-CcEEEEecCCc--EEecCHHHHHHHHhhChhcCCCcHhHHHHHHHhcCCcee
Confidence            5588988776565 6777878888885 36778876665  799999999999985  4677655443333334678885


Q ss_pred             eCCCChHHHHHHhhhhccCCcHHHHhHhH--hhHHHHHHHHHHHHHHHhhc--CCeEEehHHHHHHHHHHHHHHHHhccc
Q 036575          136 FAPFGEYWRNLRRISGTHLFSPKRMSVLG--KFRETVGLKMVKEIRVLMEK--NGAVEVRKVLHFGSLNSVMMSVFGRSY  211 (528)
Q Consensus       136 ~~~~g~~w~~~R~~~~~~~f~~~~l~~~~--~~~~~~~~~l~~~l~~~~~~--~~~vd~~~~~~~~~~~~i~~~~fG~~~  211 (528)
                      . .+|+.|+++||.+ ++.|+.++++.+.  +.+++..+++++.+.+..++  ++++|+.++++++++|+|+.++||.++
T Consensus       125 ~-~~g~~wk~~Rk~l-~~~fs~~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~vd~~~~~~~~t~dvi~~~~fG~~~  202 (502)
T PLN02426        125 N-VDGDSWRFQRKMA-SLELGSVSIRSYAFEIVASEIESRLLPLLSSAADDGEGAVLDLQDVFRRFSFDNICKFSFGLDP  202 (502)
T ss_pred             e-cCcHHHHHHHHHh-HhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceEcHHHHHHHHHHHHHHHHHhCCCC
Confidence            5 5899999999999 8999999998874  67888888899888765432  357999999999999999999999988


Q ss_pred             ccCccccCCCCCCchHHHHHHHHHHHhhccccccccccccccc---chhhHHHHHHHHhhhHHHHHHHHHHHHHHHhhhc
Q 036575          212 EFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWF---DLQGVRKRCRKLVGKVNSFVSKIIEEHKVKRINK  288 (528)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~  288 (528)
                      ++.+..     .+..++.++++........ .....+|++.++   .+.+..++..+..+.+.+++.++|+++++...  
T Consensus       203 ~~l~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~I~~r~~~~~--  274 (502)
T PLN02426        203 GCLELS-----LPISEFADAFDTASKLSAE-RAMAASPLLWKIKRLLNIGSERKLKEAIKLVDELAAEVIRQRRKLGF--  274 (502)
T ss_pred             cccCCC-----CCccHHHHHHHHHHHHHHH-HHhcchhHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHhccc--
Confidence            765420     0111455555544332211 111122322211   01233456677788899999999998775421  


Q ss_pred             ccCCCCCCCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCC-
Q 036575          289 NINGGCCDVDEGDFVDVLLGLDGENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEIDNTVGTA-  367 (528)
Q Consensus       289 ~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~-  367 (528)
                              ....|+++.+++..    .+++++.+++.++++||+|||+++++|++|+|++||++|+|+++|++++.+.+ 
T Consensus       275 --------~~~~dll~~ll~~~----~~~~~l~~~~~~~l~AG~dTta~~l~~~l~~L~~~P~v~~kl~~Ei~~~~~~~~  342 (502)
T PLN02426        275 --------SASKDLLSRFMASI----NDDKYLRDIVVSFLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQ  342 (502)
T ss_pred             --------CCcchHHHHHHhcC----CCHHHHHHHHHHHHHhccchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhCCCC
Confidence                    23579999999753    37889999999999999999999999999999999999999999999998753 


Q ss_pred             CCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeee-cceeeCCCCEEEEeccccccCCCCC-CCCCCCCCCC
Q 036575          368 RLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQV-GQHLVPAGTTAMVNMWSITHDEEVW-PEANEFKPER  445 (528)
Q Consensus       368 ~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l-~g~~Ip~g~~v~~~~~~~~~d~~~~-~~p~~F~P~R  445 (528)
                      ..++++++++||||+|||+|+||++|++|..  .|.+.+|.++ +|+.||+||.|.++.+++||||++| +||++|+|||
T Consensus       343 ~~~t~~~l~~LpYl~avi~EtLRl~p~v~~~--~r~~~~d~~~~~G~~Ip~Gt~V~~~~~~~~rd~~~~G~dp~~F~PeR  420 (502)
T PLN02426        343 EAASFEEMKEMHYLHAALYESMRLFPPVQFD--SKFAAEDDVLPDGTFVAKGTRVTYHPYAMGRMERIWGPDCLEFKPER  420 (502)
T ss_pred             CCCCHHHHhcChHHHHHHHHHHhCCCCCCCc--ceeeccCCCcCCCcEECCCCEEEEchHHhcCCccccCcChhhcCccc
Confidence            4689999999999999999999999999987  7999998887 9999999999999999999999999 9999999999


Q ss_pred             CCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccCceeEEeeecc
Q 036575          446 FLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKNSLVCKAVPRF  525 (528)
Q Consensus       446 ~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  525 (528)
                      |++++.....++..++|||+|+|.|+|+++|++|++++++.|+++|++++.++.+.......+++++|++++.|++++|.
T Consensus       421 wl~~~~~~~~~~~~~~pFg~G~R~CiG~~~A~~e~~~~la~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~gl~v~~~~r~  500 (502)
T PLN02426        421 WLKNGVFVPENPFKYPVFQAGLRVCLGKEMALMEMKSVAVAVVRRFDIEVVGRSNRAPRFAPGLTATVRGGLPVRVRERV  500 (502)
T ss_pred             cCCCCCcCCCCCcccCCCCCCCCCCccHHHHHHHHHHHHHHHHHHceEEEecCCCCCCcccceeEEecCCCEEEEEEEcc
Confidence            99743211224457999999999999999999999999999999999998654322223345678899999999999986


Q ss_pred             C
Q 036575          526 F  526 (528)
Q Consensus       526 ~  526 (528)
                      .
T Consensus       501 ~  501 (502)
T PLN02426        501 R  501 (502)
T ss_pred             C
Confidence            5


No 28 
>PLN02987 Cytochrome P450, family 90, subfamily A
Probab=100.00  E-value=4.9e-70  Score=538.01  Aligned_cols=437  Identities=17%  Similarity=0.229  Sum_probs=339.2

Q ss_pred             cccCCCCCCCCCCCCcccccchhhcC----CchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccC
Q 036575           44 FSTQTRTAIPGPSGLPILGMVLAFTG----SLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFA  117 (528)
Q Consensus        44 ~~~~~~~~~PgP~~~p~~G~~~~~~~----~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~  117 (528)
                      .++.+.+.||||.++|++||++++..    ..++.++.+|+++|  |++|++++++.++|+|+||+++++++.+  ..|.
T Consensus        24 ~~~~~~~lppgp~~~P~iG~~~~~~~~~~~~~~~~~~~~~~~~y--G~v~~~~l~~~~~vvv~~pe~~~~il~~~~~~f~  101 (472)
T PLN02987         24 TRYRRMRLPPGSLGLPLVGETLQLISAYKTENPEPFIDERVARY--GSLFMTHLFGEPTVFSADPETNRFILQNEGKLFE  101 (472)
T ss_pred             hccCCCCCcCCCcCCCchhhHHHHHhhcccCChHHHHHHHHHHh--chhhhhhhcCCCeEEEeCHHHHHHHHhCCCceEE
Confidence            34555677899999999999998741    23788899999999  8999999999999999999999999986  4454


Q ss_pred             CCCccccchheeccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHh-hHHHHHHHHHHHHHHHhhcCCeEEehHHHHH
Q 036575          118 DRPVKESAYELLFHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGK-FRETVGLKMVKEIRVLMEKNGAVEVRKVLHF  196 (528)
Q Consensus       118 ~~~~~~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~  196 (528)
                      ++.. ......+.+.+++++ +|+.|+++|+++ .+.++.+.++.+.. .+.+.++..++.|      .+++++.+.+++
T Consensus       102 ~~~~-~~~~~~lg~~~l~~~-~g~~wr~~R~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~  172 (472)
T PLN02987        102 CSYP-GSISNLLGKHSLLLM-KGNLHKKMHSLT-MSFANSSIIKDHLLLDIDRLIRFNLDSW------SSRVLLMEEAKK  172 (472)
T ss_pred             ecCc-HHHHHHhCccccccc-CcHHHHHHHHHH-HHhcChHHHHHHHHHHHHHHHHHHHHhh------ccceehHHHHHH
Confidence            4422 112222223567665 899999999998 56555555555432 1223333333333      146899999999


Q ss_pred             HHHHHHHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHH
Q 036575          197 GSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSK  276 (528)
Q Consensus       197 ~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~  276 (528)
                      ++++++++++||.+.+...          ..+.+.+.......    ....+|++     ....++..+..+++.+++.+
T Consensus       173 ~t~~vi~~~~fg~~~~~~~----------~~~~~~~~~~~~~~----~~~~~p~l-----~~~~~~~~~~~~~~~~~~~~  233 (472)
T PLN02987        173 ITFELTVKQLMSFDPGEWT----------ESLRKEYVLVIEGF----FSVPLPLF-----STTYRRAIQARTKVAEALTL  233 (472)
T ss_pred             HHHHHHHHHHcCCCChHHH----------HHHHHHHHHHHhhh----hcCCCcCC-----CchHHHHHHHHHHHHHHHHH
Confidence            9999999999997653211          02222222221111    11234442     12346667788899999999


Q ss_pred             HHHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHH
Q 036575          277 IIEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDGENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKA  356 (528)
Q Consensus       277 ~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l  356 (528)
                      .++++++....       +.....|+++.+++..  .+++++|+.+++.++++||+|||+++++|++++|++||++|+++
T Consensus       234 ~i~~r~~~~~~-------~~~~~~d~l~~ll~~~--~~~~~~ei~~~~~~l~~Ag~~tta~~l~~~l~~L~~~P~~~~~l  304 (472)
T PLN02987        234 VVMKRRKEEEE-------GAEKKKDMLAALLASD--DGFSDEEIVDFLVALLVAGYETTSTIMTLAVKFLTETPLALAQL  304 (472)
T ss_pred             HHHHHHhhhhc-------cCcccccHHHHHHhcC--CCCCHHHHHHHHHHHHHhccchHHHHHHHHHHHHHhChHHHHHH
Confidence            99988765321       1023579999999764  36999999999999999999999999999999999999999999


Q ss_pred             HHHHhHhhC---CCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCC
Q 036575          357 QIEIDNTVG---TARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEE  433 (528)
Q Consensus       357 ~~Ei~~~~~---~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~  433 (528)
                      ++|++++.+   .+..++++++.+|||++||++|+||++|+++..  +|.+.+|++++||.||+|+.|.++.+.+|+||+
T Consensus       305 ~~E~~~~~~~~~~~~~~~~~~l~~lpyl~a~i~EtLRl~p~~~~~--~R~~~~d~~~~G~~ip~Gt~v~~~~~~~~~d~~  382 (472)
T PLN02987        305 KEEHEKIRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGI--FRRAMTDIEVKGYTIPKGWKVFASFRAVHLDHE  382 (472)
T ss_pred             HHHHHHHHcccCCCCCCCHHHHhcChHHHHHHHHHHHccCCcCCc--cccCCCCeeECCEEECCCCEEEEehHHhhCCcc
Confidence            999999875   234578899999999999999999999999876  899999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcccccCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeec
Q 036575          434 VWPEANEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEM  513 (528)
Q Consensus       434 ~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~  513 (528)
                      +|+||++|+||||++++... .....++|||+|+|.|+|++||++|++++++.|+++|++++.++.++.+    ..+++|
T Consensus       383 ~~~~p~~F~PeRfl~~~~~~-~~~~~~l~FG~G~r~C~G~~lA~~e~~~~la~ll~~f~~~~~~~~~~~~----~~~~~p  457 (472)
T PLN02987        383 YFKDARTFNPWRWQSNSGTT-VPSNVFTPFGGGPRLCPGYELARVALSVFLHRLVTRFSWVPAEQDKLVF----FPTTRT  457 (472)
T ss_pred             cCCCccccCcccCCCCCCCC-CCCcceECCCCCCcCCCcHHHHHHHHHHHHHHHHhceEEEECCCCceee----cccccC
Confidence            99999999999999754321 1345799999999999999999999999999999999999877643222    347789


Q ss_pred             cCceeEEeeeccC
Q 036575          514 KNSLVCKAVPRFF  526 (528)
Q Consensus       514 ~~~~~~~~~~r~~  526 (528)
                      .+++.+++++|.-
T Consensus       458 ~~~~~~~~~~r~~  470 (472)
T PLN02987        458 QKRYPINVKRRDV  470 (472)
T ss_pred             CCCceEEEEeccc
Confidence            8899999999864


No 29 
>PLN02936 epsilon-ring hydroxylase
Probab=100.00  E-value=1.2e-69  Score=540.66  Aligned_cols=456  Identities=23%  Similarity=0.322  Sum_probs=359.3

Q ss_pred             CCCCCCCCCCcccccchhhc----CCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCcc
Q 036575           49 RTAIPGPSGLPILGMVLAFT----GSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVK  122 (528)
Q Consensus        49 ~~~~PgP~~~p~~G~~~~~~----~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~  122 (528)
                      .+..-|-.|+|++|+.+...    +.+.+..+.+|+++|  |++|++++|+.++|+++||+++++|+.+  ..|.+++..
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--G~i~~~~~g~~~~vvv~~pe~~~~il~~~~~~f~~~~~~   88 (489)
T PLN02936         11 NRLWGDDSGIPVADAKLEDVTDLLGGALFLPLFKWMNEY--GPVYRLAAGPRNFVVVSDPAIAKHVLRNYGSKYAKGLVA   88 (489)
T ss_pred             hccCCCCCCCccHHhHHhhHHHHhccHHHHHHHHHHHHc--CCEEEEccCCccEEEEcCHHHHHHHHHhccccccCcchh
Confidence            34566888999999988763    224899999999999  8999999999999999999999999975  677765433


Q ss_pred             ccchheeccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHh-hHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHH
Q 036575          123 ESAYELLFHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGK-FRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNS  201 (528)
Q Consensus       123 ~~~~~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~-~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~  201 (528)
                      . .....+|.++++ .+|+.|+++|+.+ .+.|+..++..+.+ .+.+.++++++.+.+...+++++|+.++++++++|+
T Consensus        89 ~-~~~~~~~~~i~~-~~g~~wk~~Rk~l-~~~f~~~~l~~~~~~~~~~~~~~l~~~l~~~~~~g~~vd~~~~~~~~~~dv  165 (489)
T PLN02936         89 E-VSEFLFGSGFAI-AEGELWTARRRAV-VPSLHRRYLSVMVDRVFCKCAERLVEKLEPVALSGEAVNMEAKFSQLTLDV  165 (489)
T ss_pred             h-hhHHHhcCcccc-CCchHHHHHHHhh-cCccCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceeHHHHHHHHHHHH
Confidence            2 222345667654 5899999999999 89999988888765 788899999999987765567899999999999999


Q ss_pred             HHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccc-----cccchhhHHHHHHHHhhhHHHHHHH
Q 036575          202 VMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVL-----SWFDLQGVRKRCRKLVGKVNSFVSK  276 (528)
Q Consensus       202 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-----~~~~~~~~~~~~~~~~~~l~~~~~~  276 (528)
                      ++.++||.+++..+.       . .++.+.+...+..... .....+|++     .++  .+..++..++.+.+.+++.+
T Consensus       166 i~~~~fG~~~~~~~~-------~-~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~l~~~--~p~~~~~~~~~~~i~~~~~~  234 (489)
T PLN02936        166 IGLSVFNYNFDSLTT-------D-SPVIQAVYTALKEAET-RSTDLLPYWKVDFLCKI--SPRQIKAEKAVTVIRETVED  234 (489)
T ss_pred             HHHHHcCCCcccccc-------C-cHHHHHHHHHHHHHHH-hhhccchHHhhHHHhcc--ChhhHHHHHHHHHHHHHHHH
Confidence            999999999875431       1 1333333333222111 111233322     112  12345566778888899999


Q ss_pred             HHHHHHHHhhhcccCCCCC---CCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHH
Q 036575          277 IIEEHKVKRINKNINGGCC---DVDEGDFVDVLLGLDGENRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQ  353 (528)
Q Consensus       277 ~i~~~~~~~~~~~~~~~~~---~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q  353 (528)
                      .++++++..+........+   +....|+++.|++..+  +++++++.++++++++||+|||+++++|++|+|++||++|
T Consensus       235 ~i~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~--~~~~~~i~~~~~~~~~aG~dTta~~l~~~l~~L~~~p~~~  312 (489)
T PLN02936        235 LVDKCKEIVEAEGEVIEGEEYVNDSDPSVLRFLLASRE--EVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKNPEAL  312 (489)
T ss_pred             HHHHHHHHHhhcccccccccccccCchHHHHHHHhccc--cCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCHHHH
Confidence            9988776543211110000   0234689999987543  5899999999999999999999999999999999999999


Q ss_pred             HHHHHHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCC
Q 036575          354 AKAQIEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEE  433 (528)
Q Consensus       354 ~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~  433 (528)
                      +|+|+|++++++. ..++++++++||||+|||+||||++|+++... +|.+.+|+.++||.||+|+.|.++.+++||||+
T Consensus       313 ~kl~~Ei~~~~~~-~~~~~~~~~~lpyl~avi~EtlRl~p~~~~~~-~r~~~~~~~~~g~~Ip~Gt~v~~~~~~~~rd~~  390 (489)
T PLN02936        313 RKAQEELDRVLQG-RPPTYEDIKELKYLTRCINESMRLYPHPPVLI-RRAQVEDVLPGGYKVNAGQDIMISVYNIHRSPE  390 (489)
T ss_pred             HHHHHHHHHHhcC-CCCCHHHHhhCHHHHHHHHHhhhcCCCccccc-ceeccCccccCCeEECCCCEEEecHHhccCChh
Confidence            9999999999884 45789999999999999999999999999863 666677788899999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcccc--cCCCCCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCccccccee
Q 036575          434 VWPEANEFKPERFLYEDVN--IMGSNLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSL  511 (528)
Q Consensus       434 ~~~~p~~F~P~R~l~~~~~--~~~~~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~  511 (528)
                      +|+||++|+||||+.++..  ....+..++|||.|+|.|+|++||++|+++++++|+++|++++.++++..  ...+++.
T Consensus       391 ~~~dP~~F~PeRwl~~~~~~~~~~~~~~~~pFg~G~R~C~G~~la~~~~~~~la~ll~~f~~~~~~~~~~~--~~~~~~~  468 (489)
T PLN02936        391 VWERAEEFVPERFDLDGPVPNETNTDFRYIPFSGGPRKCVGDQFALLEAIVALAVLLQRLDLELVPDQDIV--MTTGATI  468 (489)
T ss_pred             hCCCccccCccccCCCCCCccccCCCcceeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhCeEEecCCCccc--eecceEE
Confidence            9999999999999964321  11124579999999999999999999999999999999999988764332  2345667


Q ss_pred             eccCceeEEeeeccC
Q 036575          512 EMKNSLVCKAVPRFF  526 (528)
Q Consensus       512 ~~~~~~~~~~~~r~~  526 (528)
                      .|+.++.|++++|..
T Consensus       469 ~~~~~~~v~~~~R~~  483 (489)
T PLN02936        469 HTTNGLYMTVSRRRV  483 (489)
T ss_pred             eeCCCeEEEEEeeeC
Confidence            788899999999864


No 30 
>KOG0684 consensus Cytochrome P450 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00  E-value=7.9e-68  Score=478.25  Aligned_cols=441  Identities=17%  Similarity=0.281  Sum_probs=357.5

Q ss_pred             CCCCCCCC-CcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc--cccCCCCccccch
Q 036575           50 TAIPGPSG-LPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS--SAFADRPVKESAY  126 (528)
Q Consensus        50 ~~~PgP~~-~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~--~~~~~~~~~~~~~  126 (528)
                      ..||--.+ +||+|++..+..+ +.+++++..+||  |+||++.++|+.+.++.+|+....++.+  .+++-...+....
T Consensus        31 ~~PPli~gwiP~lG~a~~fgk~-P~eFl~~~~~K~--GdVFTv~l~Gk~~Tfll~p~~~~~v~~~~~~~ld~~~~~~~l~  107 (486)
T KOG0684|consen   31 KEPPLIKGWIPWLGSALAFGKD-PLEFLRECRKKY--GDVFTVLLMGKYMTFLLGPEGYDFVFKAKLADLDFEEAYSKLT  107 (486)
T ss_pred             CCCcccccCcchhhHHHHhccC-HHHHHHHHHHhc--CCeEEEEEcCcEEEEEeCchhhHHHHcCcccccCHHHHHHHhh
Confidence            46776664 8999999999988 999999999999  9999999999999999999999999987  3454444444455


Q ss_pred             heeccceeeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHH-HHHHhhcCCeEEehHHHHHHHHHHHHHH
Q 036575          127 ELLFHRAIGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKE-IRVLMEKNGAVEVRKVLHFGSLNSVMMS  205 (528)
Q Consensus       127 ~~~~g~~~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~-l~~~~~~~~~vd~~~~~~~~~~~~i~~~  205 (528)
                      ...||+|++........-++.+.+ ...+...+++++.+.+.++..+.++. +.+   ++....+.++....++.+.-.+
T Consensus       108 ~~vFg~~v~~d~~~~~~~e~~~~~-k~~L~~~~lk~~~e~m~~el~~~f~~~~~~---s~~~d~l~~~~~~ii~tAs~~l  183 (486)
T KOG0684|consen  108 TPVFGKGVVYDVPNHVMMEQKKFF-KSALGGVALKSLVELMLEELHAYFETSLGE---SGETDGLYTFCRLIIFTASRLL  183 (486)
T ss_pred             hhhcCCCccccCCCchHHHHHHHH-HHHhchhhHHHHHHHHHHHHHHHHhccccc---ccchhHhhhhhHHHhhhhHHHh
Confidence            667899998877788888898888 78899999999999999999888887 332   3444456666666666666666


Q ss_pred             HHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHHHHHHh
Q 036575          206 VFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEEHKVKR  285 (528)
Q Consensus       206 ~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~  285 (528)
                      .||......++          .....+.+....+..  +...||.  ++| ....++..++++.+.+.+...+.++++..
T Consensus       184 l~~e~r~~~d~----------~~a~l~~dLd~~F~~--~d~~FP~--~LP-~~~~r~~~ra~~~i~k~f~~~i~~rr~s~  248 (486)
T KOG0684|consen  184 LGGEVRDQLDA----------DVAKLYHDLDQGFQP--FDFLFPY--NLP-IPLLRRRDRARKKISKIFSKIILDRRASI  248 (486)
T ss_pred             hhhhhhhhhcc----------hHHHHHHHHhccccc--hHhhccc--CCC-cchhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence            67766554331          233333333332222  2234553  332 33445555888999999999999998765


Q ss_pred             hhcccCCCCCCCCCCcHHHHHhhcCCC-CCCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHhHhh
Q 036575          286 INKNINGGCCDVDEGDFVDVLLGLDGE-NRLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEIDNTV  364 (528)
Q Consensus       286 ~~~~~~~~~~~~~~~d~l~~ll~~~~~-~~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~  364 (528)
                      +          ....|+++.+++...+ .+.+++|+....+.+++||+.||+.+.+|++++|++|||+++.+++|+++++
T Consensus       249 s----------~~~~dmlq~l~~~y~dg~~~te~e~a~~li~~LwA~Q~ns~ptsfW~l~yLl~~Pe~~~a~~eE~k~vl  318 (486)
T KOG0684|consen  249 S----------KWDNDMLQSLMEKYKDGRPTTEEEIAGLLIGLLWAGQHNSSPTSFWTLAYLLRHPEAQKAVREEQKRVL  318 (486)
T ss_pred             c----------cccHHHHHHHHHHhhcCCcCcHHHHHHHHHHHHHhccccccHHHHHHHHHHhhCHHHHHHHHHHHHHHh
Confidence            3          4567899999884332 3789999999999999999999999999999999999999999999999999


Q ss_pred             CCCCC-CCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceeeecc----eeeCCCCEEEEeccccccCCCCCCCCC
Q 036575          365 GTARL-VSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQ----HLVPAGTTAMVNMWSITHDEEVWPEAN  439 (528)
Q Consensus       365 ~~~~~-~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g----~~Ip~g~~v~~~~~~~~~d~~~~~~p~  439 (528)
                      |...+ ++.+++++||.|++||+|||||+||.+.+  .|.+.+|.++.+    |.||+|..|++++..+|+||++|+||+
T Consensus       319 G~~~~~l~~d~L~~lplL~~~IkEtLRL~~p~~~~--~R~v~~D~tv~~~~~~Y~Ip~G~~valsP~~~hr~peif~dp~  396 (486)
T KOG0684|consen  319 GEKKEKLTYDQLKDLPLLDSCIKETLRLHPPAHSL--MRKVHEDLTVPGSDGEYVIPKGDIVALSPFLLHRDPEIFPDPE  396 (486)
T ss_pred             hccCCCCCHHHHhcchHHHHHHHHHHhcCCchhhH--HHhhccceeeccCCcceecCCCCEEEeccccccCCccccCChh
Confidence            96544 99999999999999999999999999987  799999999965    999999999999999999999999999


Q ss_pred             CCCCCCCCCcccccC--CC--CCccccCCCCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccC
Q 036575          440 EFKPERFLYEDVNIM--GS--NLRLAPFGSGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKN  515 (528)
Q Consensus       440 ~F~P~R~l~~~~~~~--~~--~~~~~~Fg~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~  515 (528)
                      +|+|+||++++.+..  ..  ++.+||||+|.|.|||+.||.+|+|.++..++++||+++.++..++... ..++..|..
T Consensus       397 ~Fk~dRf~~~~~~~~k~g~kl~yy~mpfGaGr~~CpGr~FA~~eIk~~~~l~L~~fdleLid~~~P~~d~-s~~v~~P~g  475 (486)
T KOG0684|consen  397 DFKPDRFLKDNGESKKNGEKLDYYYMPFGAGRHRCPGRSFAYLEIKQFISLLLRHFDLELIDGPFPEVDY-SRMVMQPEG  475 (486)
T ss_pred             hCChhhccCCCcccccccccccccccccCCCcCCCCchHHHHHHHHHHHHHHHHHcceeecCCCCCCCCH-HHhhcCCCC
Confidence            999999998765431  12  2346999999999999999999999999999999999999973333333 245778888


Q ss_pred             ceeEEeeecc
Q 036575          516 SLVCKAVPRF  525 (528)
Q Consensus       516 ~~~~~~~~r~  525 (528)
                      +++++++.|.
T Consensus       476 ~v~irYK~R~  485 (486)
T KOG0684|consen  476 DVRIRYKRRP  485 (486)
T ss_pred             CceEEEeecC
Confidence            9999999886


No 31 
>PLN02648 allene oxide synthase
Probab=100.00  E-value=4.4e-61  Score=470.24  Aligned_cols=400  Identities=18%  Similarity=0.213  Sum_probs=296.6

Q ss_pred             cCCCCCCCCCCCCcccccchhhcC----CchHHHHHHHHHhcCCCC-eEEEEcCCeeE-------EEecCHHHHHHHhhc
Q 036575           46 TQTRTAIPGPSGLPILGMVLAFTG----SLTHRVLAKLAVSFRAKP-LMAFSVGFTRF-------VISSHPDTAKEILNS  113 (528)
Q Consensus        46 ~~~~~~~PgP~~~p~~G~~~~~~~----~~~~~~~~~~~~ky~~g~-v~~v~lg~~~~-------v~i~dp~~v~~i~~~  113 (528)
                      ..+.+.|||+.++|++|+++++..    ..+..++.+.++||  |+ ||+++++|.++       |+++|||+++.+|.+
T Consensus        13 ~~~~~~PPg~~g~P~iG~~~~~~~~~~~~~~~~F~~~~~~ky--G~~vfk~~l~g~p~~~~~~~~v~~~~~e~~~~v~~~   90 (480)
T PLN02648         13 SLPLREIPGSYGLPFLGAIKDRLDYFYFQGEDEFFRSRVEKY--KSTVFRVNMPPGPFIAPDPRVIALLDQKSFPVLFDV   90 (480)
T ss_pred             CCCCCCCCCCCCCcCcchhhhhhhHHHhcChHHHHHHHHHHh--CCceEEecCCCCCCCCCCCCEEEEEcCCceeeeecc
Confidence            346678999999999999986543    22579999999999  88 99999998655       999999999999984


Q ss_pred             ----cc--cCCCCccccchheeccce---eeeCCCChHHHHHHhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhc
Q 036575          114 ----SA--FADRPVKESAYELLFHRA---IGFAPFGEYWRNLRRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEK  184 (528)
Q Consensus       114 ----~~--~~~~~~~~~~~~~~~g~~---~~~~~~g~~w~~~R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~  184 (528)
                          +.  +..  .+..... ++|.+   .++..+|+.|+++|+++ .+.|++ .++.+.+.+++.+++++++|.....+
T Consensus        91 ~~~~~~~~~~~--~~~~~~~-l~G~~~~~s~~~~~g~~H~r~Rrll-~~~f~~-~~~~~~~~m~~~~~~~~~~w~~~~~~  165 (480)
T PLN02648         91 SKVDKRDVFTG--TYMPSTA-FTGGYRVLSYLDPSEPKHAKLKSFL-FELLKS-RHRRFIPEFRAAFAELFDTWEAELAK  165 (480)
T ss_pred             hhcccccccee--eeccCcc-ccCCceeeeecCCCCchHHHHHHHH-HHHHHH-hhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence                21  221  2233334 56643   33566899999999999 899994 77999999999999999999765345


Q ss_pred             CCeEEehHHHHHHHHHHHHHHHHhcccccCccccCCCCCCchHHHHHHHHHHHhhcccccccccccccccchhhHHHH--
Q 036575          185 NGAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSHELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKR--  262 (528)
Q Consensus       185 ~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~--  262 (528)
                      ++++|+.+.++++++|++++++||.+.+...        -...+...........       .+|..... .....++  
T Consensus       166 ~~~vdv~~~~~~lt~~vi~~~lfG~~~~~~~--------l~~~~~~~~~~~~~~~-------~~p~~~~~-l~~~~~~~i  229 (480)
T PLN02648        166 KGKAEFNDPLDQMAFNFLCKALTGKDPSETA--------LGSDGPALIQKWLALQ-------LAPLASTG-LPHVLEELL  229 (480)
T ss_pred             CCCccccchHHHHHHHHHHHHHcCCCcchhh--------hccchhHHHHHHHHHH-------hhHHHHcC-chHHHHHHh
Confidence            5679999999999999999999998655310        0001111121111100       01110000 0000000  


Q ss_pred             ----------HHHHhhhHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcHHHHHhhcCCCCCCCHHHHHHHHHH-HHHhh
Q 036575          263 ----------CRKLVGKVNSFVSKIIEEHKVKRINKNINGGCCDVDEGDFVDVLLGLDGENRLTDSDMIAVLWE-MIFRG  331 (528)
Q Consensus       263 ----------~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~~~~~~l~~~ei~~~~~~-~~~Ag  331 (528)
                                ..+..+.+.+++++.                         ++.+++...+.+++++|+.++++. ..+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~ll~~~~~~~l~~~ei~~~~l~~~~~~t  284 (480)
T PLN02648        230 LHTFPLPFFLVKSDYDKLYDFFRAS-------------------------ATEALDLAEKFGISREEALHNLLFVLGFNA  284 (480)
T ss_pred             hcccCCchhhhhccHHHHHHHHHHH-------------------------HHHHHHHHHhcCCCHHHHHHHHHHHHHHHh
Confidence                      000111111111111                         112222222235999999999875 45677


Q ss_pred             ccchHHHHHHHHHHHhhChH-HHHHHHHHHhHhhCC-CCCCCCCCCCCChhHHHHHHhhhcCCCCCCcccccccccceee
Q 036575          332 TDTVAILLEWILARMVLHPD-IQAKAQIEIDNTVGT-ARLVSDADLPNLPYLHAIVKETLRMHPPGPLLSWARLAIHDTQ  409 (528)
Q Consensus       332 ~dtt~~~l~~~l~~l~~~p~-~q~~l~~Ei~~~~~~-~~~~~~~~l~~lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~  409 (528)
                      ++|++++++|++|+|++||+ +|+++++|++++.+. +..++++++++||||++||+|+||++|+++..  .|.+.+|++
T Consensus       285 ~~~~~~~l~~~l~~L~~~p~~v~~klr~Ei~~~~~~~~~~~t~~~l~~l~yl~avi~EtLRl~p~v~~~--~r~a~~d~~  362 (480)
T PLN02648        285 FGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVKSVVYEALRIEPPVPFQ--YGRAREDFV  362 (480)
T ss_pred             hHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhccCCCCCCHHHHhcCHHHHHHHHHHHhhcCCcccc--cceecCCEE
Confidence            88888999999999999995 999999999999863 45689999999999999999999999999987  799999999


Q ss_pred             ec----ceeeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCcccccCCCCCccccC---------CCCCCCCcchHHH
Q 036575          410 VG----QHLVPAGTTAMVNMWSITHDEEVWPEANEFKPERFLYEDVNIMGSNLRLAPF---------GSGRRVCPGKALG  476 (528)
Q Consensus       410 l~----g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~F---------g~G~r~C~G~~~A  476 (528)
                      ++    ||.||||+.|+++.+.+||||++|+||++|+|+||++++..   ....+++|         |+|+|.|+|++||
T Consensus       363 l~~~~~g~~IpkG~~V~~~~~~~hrdp~~~~dP~~F~PeRf~~~~~~---~~~~~~~f~~g~~~~~~G~G~R~C~G~~~A  439 (480)
T PLN02648        363 IESHDAAFEIKKGEMLFGYQPLVTRDPKVFDRPEEFVPDRFMGEEGE---KLLKYVFWSNGRETESPTVGNKQCAGKDFV  439 (480)
T ss_pred             EecCCceEEECCCCEEEEChHHHhCCcccCCCcceeCCCCCCCCCcc---ccccccccCCCcccCCCCCCCccCccHHHH
Confidence            96    79999999999999999999999999999999999964321   11233444         6778999999999


Q ss_pred             HHHHHHHHHHHHhhcc-cccCCC
Q 036575          477 LATVELWLAQLLQSFK-WVPSDA  498 (528)
Q Consensus       477 ~~~~~~~l~~ll~~f~-~~~~~~  498 (528)
                      ++|+++++++|+++|+ +++.++
T Consensus       440 ~~e~~~~la~Ll~~f~~~~l~~~  462 (480)
T PLN02648        440 VLVARLFVAELFLRYDSFEIEVD  462 (480)
T ss_pred             HHHHHHHHHHHHHHhCEEeecCC
Confidence            9999999999999998 998765


No 32 
>COG2124 CypX Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00  E-value=6.4e-56  Score=429.25  Aligned_cols=378  Identities=24%  Similarity=0.377  Sum_probs=301.2

Q ss_pred             HHHHHHHHHhcCCCCeEEEEcCCee--EEEecCHHHHHHHhhccc-cCCCCccccc---hheeccceeeeCCCChHHHHH
Q 036575           73 HRVLAKLAVSFRAKPLMAFSVGFTR--FVISSHPDTAKEILNSSA-FADRPVKESA---YELLFHRAIGFAPFGEYWRNL  146 (528)
Q Consensus        73 ~~~~~~~~~ky~~g~v~~v~lg~~~--~v~i~dp~~v~~i~~~~~-~~~~~~~~~~---~~~~~g~~~~~~~~g~~w~~~  146 (528)
                      ......+.+.|  |.++..+..+..  ++++++|+++++++++.. +++.......   ....+|.+.++..+|+.|+++
T Consensus        25 ~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~s~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~dg~~H~r~  102 (411)
T COG2124          25 RFFLERAEDPY--GDYFTLRLPGPGDGFWVVSRPADVREVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRL  102 (411)
T ss_pred             hhhHHHHhCCC--chhhhhhccCccceEEEEcCHHHHHHHHcCcccccccccccccccchhhhccccceeecCCHHHHHH
Confidence            44455567777  677777765543  799999999999999744 3332222211   234556553456699999999


Q ss_pred             HhhhhccCCcHHHHhHhHhhHHHHHHHHHHHHHHHhhcCCeEEehHHHHHHHHHHHHHHHHhcccccCccccCCCCCCch
Q 036575          147 RRISGTHLFSPKRMSVLGKFRETVGLKMVKEIRVLMEKNGAVEVRKVLHFGSLNSVMMSVFGRSYEFGEKCNYHDDDGSH  226 (528)
Q Consensus       147 R~~~~~~~f~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~vd~~~~~~~~~~~~i~~~~fG~~~~~~~~~~~~~~~~~~  226 (528)
                      |+++ .+.|+++.++.+.+.+.+.++++++.+ ..  + ..+++.+.+..+++++|+ .+||.+.+...           
T Consensus       103 Rkl~-~~~F~~~~~~~~~~~i~~~~~~~~~~~-~~--~-~~~~v~~~a~~l~~~vi~-~l~Gv~~~~~~-----------  165 (411)
T COG2124         103 RKLL-APAFTPRALRGYRPLIREIADRLLDDL-WQ--G-GADLVLDFAAELTLRVIA-ELLGVPLEDRP-----------  165 (411)
T ss_pred             HHHh-ccccCHHHHHHHHHHHHHHHHHHHHhc-cc--C-CchhHHHHhhhhhHHHHH-HHhCCCHHHHH-----------
Confidence            9999 899999999999999999999999999 32  2 677899999999999999 99998866432           


Q ss_pred             HHHHHHHHHHHhhcccccccccccccccchhhHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcHHHHH
Q 036575          227 ELEGLVREGYELLGTFNWSDHFPVLSWFDLQGVRKRCRKLVGKVNSFVSKIIEEHKVKRINKNINGGCCDVDEGDFVDVL  306 (528)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~l  306 (528)
                      .+............        |...   ......+..++...+.+++.++|++++.             ...+|+++.|
T Consensus       166 ~~~~~~~~~~~~~~--------~~~~---~~~~~~~~~~a~~~~~~~~~~li~~rR~-------------~~~~dlls~l  221 (411)
T COG2124         166 QLLRWSDALLLRLD--------PDLG---PEEPWRRARAARRELDAYLRALIAERRA-------------APRDDLLSLL  221 (411)
T ss_pred             HHHHHHHHHHhccC--------cccC---CcccHHHHHHHHHHHHHHHHHHHHHhcc-------------CCcccHHHHH
Confidence            23333222222100        1111   1223456677888999999999999882             5678999999


Q ss_pred             hhcCCCC--CCCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHhHhhCCCCCCCCCCCCCChhHHHH
Q 036575          307 LGLDGEN--RLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEIDNTVGTARLVSDADLPNLPYLHAI  384 (528)
Q Consensus       307 l~~~~~~--~l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~  384 (528)
                      +.+.+++  .+|++||.+++.++++||+|||+++++|++|.|++||+.++++++|.+.                ||++++
T Consensus       222 ~~a~~~~~~~lsd~Ei~~~~~~ll~AGheTTa~~l~~a~~~L~~~P~~~~~l~~e~~~----------------~~~~~~  285 (411)
T COG2124         222 LSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEPDR----------------PLLEAV  285 (411)
T ss_pred             HHHhhCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHCchHHHHHHhCcch----------------HHHHHH
Confidence            9876665  4999999999999999999999999999999999999999999998665                889999


Q ss_pred             HHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEEeccccccCCCCCCCCCCCCCCCCCCcccccCCCCCccccCC
Q 036575          385 VKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVWPEANEFKPERFLYEDVNIMGSNLRLAPFG  464 (528)
Q Consensus       385 i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~~~p~~F~P~R~l~~~~~~~~~~~~~~~Fg  464 (528)
                      |+|+||++||++..  .|.+.+|++++|+.||+|+.|.++.+++||||++|+||++|||+||.          ..++|||
T Consensus       286 v~E~LR~~ppv~~~--~R~~~~d~~igg~~Ip~G~~V~~~~~~anrDp~~f~~P~~F~p~R~~----------~~~l~FG  353 (411)
T COG2124         286 VEETLRLYPPVPLA--RRVATEDVELGGYRIPAGTVVLLSIGAANRDPEVFPDPDEFDPERFN----------NAHLPFG  353 (411)
T ss_pred             HHHHHHhCCchhcc--ceeccCCEeeCCEEeCCCCEEEecHhhhcCChhhCCChhhcCCCCCC----------CCCcCCC
Confidence            99999999999985  89999999999999999999999999999999999999999999988          4689999


Q ss_pred             CCCCCCcchHHHHHHHHHHHHHHHhhcccccCCCCCcCCcccccceeeccCceeEEeeec
Q 036575          465 SGRRVCPGKALGLATVELWLAQLLQSFKWVPSDAGGVDLSECLKLSLEMKNSLVCKAVPR  524 (528)
Q Consensus       465 ~G~r~C~G~~~A~~~~~~~l~~ll~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  524 (528)
                      +|+|.|+|++||++|++++++.++++|++....+ ......  ..+..+.....+.++.+
T Consensus       354 ~G~H~ClG~~lA~~E~~~~l~~ll~r~~~~~~~~-~~~~~~--~~~~~~~g~~~l~v~~~  410 (411)
T COG2124         354 GGPHRCLGAALARLELKVALAELLRRFPLLLLAE-PPPLVR--RPTLVPRGGERLPVRRR  410 (411)
T ss_pred             CCCccccCHHHHHHHHHHHHHHHHHhCchhhcCC-CCCccc--cccccCCCcceeeeecC
Confidence            9999999999999999999999999999887665 222222  23333444555555443


No 33 
>PF08492 SRP72:  SRP72 RNA-binding domain;  InterPro: IPR013699  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the RNA binding domain of the SRP72 subunit. This domain is responsible for the binding of SRP72 to the 7S SRP RNA []. ; GO: 0008312 7S RNA binding, 0006614 SRP-dependent cotranslational protein targeting to membrane, 0048500 signal recognition particle
Probab=62.57  E-value=5.8  Score=26.22  Aligned_cols=8  Identities=50%  Similarity=0.920  Sum_probs=6.2

Q ss_pred             CCCCCCCc
Q 036575          442 KPERFLYE  449 (528)
Q Consensus       442 ~P~R~l~~  449 (528)
                      ||||||+-
T Consensus        44 DPERWLP~   51 (59)
T PF08492_consen   44 DPERWLPK   51 (59)
T ss_pred             CccccCch
Confidence            78888863


No 34 
>PF12554 MOZART1:  Mitotic-spindle organizing gamma-tubulin ring associated;  InterPro: IPR022214  This family of proteins is found in eukaryotes. Proteins in this family are typically between 71 and 105 amino acids in length. There is a single completely conserved residue L that may be functionally important. 
Probab=52.95  E-value=44  Score=21.10  Aligned_cols=43  Identities=16%  Similarity=0.234  Sum_probs=34.4

Q ss_pred             HHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHh
Q 036575          319 DMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEID  361 (528)
Q Consensus       319 ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~  361 (528)
                      ++..++..++-.|.|..+-.++-.+....-||+....+-+|++
T Consensus         6 d~l~eiS~lLntgLd~etL~ici~L~e~GVnPeaLA~vI~elr   48 (48)
T PF12554_consen    6 DVLHEISDLLNTGLDRETLSICIELCENGVNPEALAAVIKELR   48 (48)
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHhC
Confidence            4566677777788888888888888888889999888887763


No 35 
>PF12273 RCR:  Chitin synthesis regulation, resistance to Congo red;  InterPro: IPR020999  RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 []. 
Probab=51.15  E-value=17  Score=28.87  Aligned_cols=7  Identities=29%  Similarity=0.216  Sum_probs=3.2

Q ss_pred             CCCCCCC
Q 036575           48 TRTAIPG   54 (528)
Q Consensus        48 ~~~~~Pg   54 (528)
                      +...+.|
T Consensus        30 G~~P~~g   36 (130)
T PF12273_consen   30 GLQPIYG   36 (130)
T ss_pred             CCCCcCC
Confidence            4444444


No 36 
>PHA02902 putative IMV membrane protein; Provisional
Probab=43.11  E-value=39  Score=22.43  Aligned_cols=16  Identities=13%  Similarity=0.112  Sum_probs=7.6

Q ss_pred             chhHHHHHHHHHHHhc
Q 036575           17 SLPFIFVSIFCFFLAP   32 (528)
Q Consensus        17 ~l~~~~~~~~~~~~~~   32 (528)
                      ++.+.+++++.+++++
T Consensus         6 fvi~~v~v~Ivclliy   21 (70)
T PHA02902          6 FVILAVIVIIFCLLIY   21 (70)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            3444444455555553


No 37 
>KOG3506 consensus 40S ribosomal protein S29 [Translation, ribosomal structure and biogenesis]
Probab=39.54  E-value=14  Score=23.68  Aligned_cols=11  Identities=45%  Similarity=1.008  Sum_probs=9.0

Q ss_pred             ccCCCCCCCCc
Q 036575          461 APFGSGRRVCP  471 (528)
Q Consensus       461 ~~Fg~G~r~C~  471 (528)
                      -+||-|+|.|-
T Consensus        12 ~kfg~GsrsC~   22 (56)
T KOG3506|consen   12 RKFGQGSRSCR   22 (56)
T ss_pred             cccCCCCccee
Confidence            37999999974


No 38 
>PF12508 DUF3714:  Protein of unknown function (DUF3714) ;  InterPro: IPR022187  Proteins in this entry are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. 
Probab=39.37  E-value=24  Score=30.40  Aligned_cols=43  Identities=23%  Similarity=0.261  Sum_probs=31.8

Q ss_pred             ChhHHHHHHhhhcCCCCCCcccccccccceeeecceeeCCCCEEEE
Q 036575          378 LPYLHAIVKETLRMHPPGPLLSWARLAIHDTQVGQHLVPAGTTAMV  423 (528)
Q Consensus       378 lp~l~a~i~E~lRl~p~~~~~~~~R~~~~d~~l~g~~Ip~g~~v~~  423 (528)
                      -..+.|||.|+.-...-.- +  .=+..+|+.++|..||||+.|.-
T Consensus        52 ~n~I~A~V~~~qtv~~Gs~-v--rlRLle~i~i~g~~IPkgt~l~G   94 (200)
T PF12508_consen   52 KNTIRAVVDGTQTVVDGSR-V--RLRLLEDIQIGGILIPKGTYLYG   94 (200)
T ss_pred             CCeEEEEEecceEEeCCCE-E--EEEEcCceEECCEEeCCCCEEEE
Confidence            4457889999877655443 2  23456899999999999998865


No 39 
>PF05952 ComX:  Bacillus competence pheromone ComX;  InterPro: IPR009233 Competence is the ability of a cell to take up exogenous DNA from its environment, resulting in transformation. It is widespread among bacteria and is probably an important mechanism for the horizontal transfer of genes. Cells that take up DNA inevitably acquire the nucleotides the DNA consists of, and, because nucleotides are needed for DNA and RNA synthesis and are expensive to synthesise, these may make a significant contribution to the cell's energy budget []. The lateral gene transfer caused by competence also contributes to the genetic diversity that makes evolution possible.  DNA usually becomes available by the death and lysis of other cells. Competent bacteria use components of extracellular filaments called type 4 pili to create pores in their membranes and pull DNA through the pores into the cytoplasm. This process, including the development of competence and the expression of the uptake machinery, is regulated in response to cell-cell signalling and/or nutritional conditions []. Natural genetic competence in Bacillus subtilis is controlled by quorum-sensing (QS). The ComP- ComA two-component system detects the signalling molecule ComX, and this signal is transduced by a conserved phosphotransfer mechanism. ComX is synthesised as an inactive precursor and is then cleaved and modified by ComQ before export to the extracellular environment [].
Probab=38.06  E-value=34  Score=22.44  Aligned_cols=18  Identities=22%  Similarity=0.396  Sum_probs=15.5

Q ss_pred             HHHHHhhChHHHHHHHHH
Q 036575          342 ILARMVLHPDIQAKAQIE  359 (528)
Q Consensus       342 ~l~~l~~~p~~q~~l~~E  359 (528)
                      ++.+|.+||++.+++.+.
T Consensus         5 iV~YLv~nPevl~kl~~g   22 (57)
T PF05952_consen    5 IVNYLVQNPEVLEKLKEG   22 (57)
T ss_pred             HHHHHHHChHHHHHHHcC
Confidence            567999999999999874


No 40 
>PF01102 Glycophorin_A:  Glycophorin A;  InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=37.24  E-value=35  Score=26.67  Aligned_cols=27  Identities=11%  Similarity=0.041  Sum_probs=10.7

Q ss_pred             hhHHHHHHHHHHHhcchhhHHHhhhcc
Q 036575           18 LPFIFVSIFCFFLAPGGLAWALYKSRF   44 (528)
Q Consensus        18 l~~~~~~~~~~~~~~~~~~~~~~~~~~   44 (528)
                      ..+++.+++.++++++++.|.+.|+++
T Consensus        67 ~~Ii~gv~aGvIg~Illi~y~irR~~K   93 (122)
T PF01102_consen   67 IGIIFGVMAGVIGIILLISYCIRRLRK   93 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred             eehhHHHHHHHHHHHHHHHHHHHHHhc
Confidence            334444444444443333444444443


No 41 
>PF15330 SIT:  SHP2-interacting transmembrane adaptor protein, SIT
Probab=36.58  E-value=69  Score=24.41  Aligned_cols=12  Identities=17%  Similarity=0.064  Sum_probs=8.8

Q ss_pred             CCcccccchhhc
Q 036575           57 GLPILGMVLAFT   68 (528)
Q Consensus        57 ~~p~~G~~~~~~   68 (528)
                      ..|+.||+....
T Consensus        45 ~~p~YgNL~~~q   56 (107)
T PF15330_consen   45 DDPCYGNLELQQ   56 (107)
T ss_pred             CCcccccccccc
Confidence            378899987654


No 42 
>PF14129 DUF4296:  Domain of unknown function (DUF4296)
Probab=34.73  E-value=1.8e+02  Score=21.10  Aligned_cols=50  Identities=10%  Similarity=0.127  Sum_probs=42.7

Q ss_pred             CCHHHHHHHHHHHHHhhccchHHHHHHHHHHHhhChHHHHHHHHHHhHhh
Q 036575          315 LTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKAQIEIDNTV  364 (528)
Q Consensus       315 l~~~ei~~~~~~~~~Ag~dtt~~~l~~~l~~l~~~p~~q~~l~~Ei~~~~  364 (528)
                      .+.+.........++-=++.++....-.+.+-++||+..+++.+.+.+-+
T Consensus        29 ~~~~~~~~~~~~~I~kKy~Ids~~f~~S~~YY~~~p~~~~~Iy~~V~~rL   78 (87)
T PF14129_consen   29 DSSDDNMIAYYQYIFKKYGIDSAQFDSSMVYYSRNPEEYEKIYDKVIERL   78 (87)
T ss_pred             ccHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence            35566667778889999999999999999999999999999998887654


No 43 
>PF09201 SRX:  SRX;  InterPro: IPR015284  The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. The SR receptor is a monomer consisting of the loosely membrane-associated SR-alpha homologue FtsY, while the eukaryotic SR receptor is a heterodimer of SR-alpha (70 kDa) and SR-beta (25 kDa), both of which contain a GTP-binding domain []. SR-alpha regulates the targeting of SRP-ribosome-nascent polypeptide complexes to the translocon []. SR-alpha binds to the SRP54 subunit of the SRP complex. The SR-beta subunit is a transmembrane GTPase that anchors the SR-alpha subunit (a peripheral membrane GTPase) to the ER membrane []. SR-beta interacts with the N-terminal SRX-domain of SR-alpha, which is not present in the bacterial FtsY homologue. SR-beta also functions in recruiting the SRP-nascent polypeptide to the protein-conducting channel.  This entry represents a homologue of the alpha subunit of the SR receptor. Members of this entry consist of a central six-stranded anti-parallel beta-sheet sandwiched by helix alpha1 on one side and helices alpha2-alpha4 on the other. They interact with the small GTPase SR-beta, forming a complex that matches a class of small G protein-effector complexes, including Rap-Raf, Ras-PI3K(gamma), Ras-RalGDS, and Arl2-PDE(delta) []. ; PDB: 1NRJ_A.
Probab=33.93  E-value=34  Score=27.02  Aligned_cols=23  Identities=22%  Similarity=0.483  Sum_probs=16.7

Q ss_pred             CCcchHHHHHHHHHHHHHHHhhc
Q 036575          469 VCPGKALGLATVELWLAQLLQSF  491 (528)
Q Consensus       469 ~C~G~~~A~~~~~~~l~~ll~~f  491 (528)
                      +|.|+.||...+--+|.+|+..=
T Consensus        19 N~~gKKFsE~QiN~FIs~lItsP   41 (148)
T PF09201_consen   19 NCLGKKFSETQINAFISHLITSP   41 (148)
T ss_dssp             ETTS----HHHHHHHHHHHHHS-
T ss_pred             cccchHHHHHHHHHHHHHHhcCC
Confidence            79999999999999999998754


No 44 
>PF11608 Limkain-b1:  Limkain b1;  InterPro: IPR024582 This entry represents a conserved domain found in limkain b1, which is a novel human autoantigen, localised to a subset of ABCD3 and PXF marked peroxisomes. Limkain b1 may be a relatively common target of human autoantibodies reactive to cytoplasmic vesicle-like structures [].; PDB: 2DIU_A.
Probab=32.98  E-value=1.5e+02  Score=21.53  Aligned_cols=40  Identities=13%  Similarity=0.107  Sum_probs=29.2

Q ss_pred             hHHHHHHHHHhcCCCCeEEEEcCCeeEEEecCHHHHHHHhhc
Q 036575           72 THRVLAKLAVSFRAKPLMAFSVGFTRFVISSHPDTAKEILNS  113 (528)
Q Consensus        72 ~~~~~~~~~~ky~~g~v~~v~lg~~~~v~i~dp~~v~~i~~~  113 (528)
                      ....+.++.+.+| |.|..+ .++.-++-+.+++.++...+.
T Consensus        19 I~~RL~qLsdNCG-GkVl~v-~~~tAilrF~~~~~A~RA~KR   58 (90)
T PF11608_consen   19 IKNRLRQLSDNCG-GKVLSV-SGGTAILRFPNQEFAERAQKR   58 (90)
T ss_dssp             HHHHHHHHHHTTT---EEE---TT-EEEEESSHHHHHHHHHH
T ss_pred             HHHHHHHHhhccC-CEEEEE-eCCEEEEEeCCHHHHHHHHHh
Confidence            5678899999998 899776 567778999999999887763


No 45 
>PF15300 INT_SG_DDX_CT_C:  INTS6/SAGE1/DDX26B/CT45 C-terminus
Probab=31.49  E-value=23  Score=24.00  Aligned_cols=34  Identities=18%  Similarity=0.235  Sum_probs=21.2

Q ss_pred             HHHHHHHHHhHhhCCCCCCCCCCCCCChhHHHHHHhhhcCC
Q 036575          352 IQAKAQIEIDNTVGTARLVSDADLPNLPYLHAIVKETLRMH  392 (528)
Q Consensus       352 ~q~~l~~Ei~~~~~~~~~~~~~~l~~lp~l~a~i~E~lRl~  392 (528)
                      -.++|.+-++.+-|+-   .    .+.-+++.+|+|++|+.
T Consensus        21 ~ye~iF~lL~~vqG~~---~----~r~~fv~~~IkEA~RFk   54 (65)
T PF15300_consen   21 NYEKIFKLLEQVQGPL---E----VRKQFVEMIIKEAARFK   54 (65)
T ss_pred             cHHHHHHHHHHccCCH---H----HHHHHHHHHHHHHHHHH
Confidence            3456666666654421   0    23457899999999963


No 46 
>PRK06789 flagellar motor switch protein; Validated
Probab=31.39  E-value=54  Score=22.99  Aligned_cols=41  Identities=7%  Similarity=0.017  Sum_probs=31.3

Q ss_pred             HHHhhhcCCCCCCcccccccccce--eeecceeeCCCCEEEEec
Q 036575          384 IVKETLRMHPPGPLLSWARLAIHD--TQVGQHLVPAGTTAMVNM  425 (528)
Q Consensus       384 ~i~E~lRl~p~~~~~~~~R~~~~d--~~l~g~~Ip~g~~v~~~~  425 (528)
                      -++|.+.+.+-...- +-|.+-+.  +.++|..|.+|..|.++-
T Consensus        21 ~i~dll~L~~Gsvi~-Ldk~~~epvdI~vNg~lia~GEvVvv~~   63 (74)
T PRK06789         21 KIEDLLHITKGTLYR-LENSTKNTVRLMLENEEIGTGKILTKNG   63 (74)
T ss_pred             EHHHHhcCCCCCEEE-eCCcCCCCEEEEECCEEEeEEeEEEECC
Confidence            378889999876654 47777665  555899999999998753


No 47 
>COG0851 MinE Septum formation topological specificity factor [Cell division and chromosome partitioning]
Probab=31.20  E-value=79  Score=22.87  Aligned_cols=42  Identities=17%  Similarity=0.241  Sum_probs=27.5

Q ss_pred             HHHHHhhccchHHHHHHHHHHHhh-------ChHHHHHHHHHHhHhhCC
Q 036575          325 WEMIFRGTDTVAILLEWILARMVL-------HPDIQAKAQIEIDNTVGT  366 (528)
Q Consensus       325 ~~~~~Ag~dtt~~~l~~~l~~l~~-------~p~~q~~l~~Ei~~~~~~  366 (528)
                      +.|++.-.-+|+++..-=|..+..       .|++.+.+|+||-+++..
T Consensus         4 ~dff~~r~~~Sa~~AkeRLQiilA~eR~~~~~pd~l~~Lr~eIl~VI~K   52 (88)
T COG0851           4 FDFFFSRKKNSAETAKERLQLILAHERAAGLQPDYLEQLRKEILEVISK   52 (88)
T ss_pred             HHHHHhcCCCcHHHHHHHHHHhhhhhhhcCCCcchHHHHHHHHHHHHHH
Confidence            344443333666666665554432       389999999999998754


No 48 
>PF13625 Helicase_C_3:  Helicase conserved C-terminal domain
Probab=28.64  E-value=1.3e+02  Score=23.86  Aligned_cols=37  Identities=11%  Similarity=0.189  Sum_probs=29.2

Q ss_pred             hHHHHHHHHHhcCCCCeEEEEcC-CeeEEEecCHHHHHHHhhc
Q 036575           72 THRVLAKLAVSFRAKPLMAFSVG-FTRFVISSHPDTAKEILNS  113 (528)
Q Consensus        72 ~~~~~~~~~~ky~~g~v~~v~lg-~~~~v~i~dp~~v~~i~~~  113 (528)
                      ....+.+|.++|  |.+   .+. +..++...|++.++++...
T Consensus        76 v~~~i~~w~~~~--g~v---~l~~~~~~l~~~d~~~l~~l~~~  113 (129)
T PF13625_consen   76 VEQSIEDWARRY--GRV---RLYKGAYLLECDDPELLDELLAD  113 (129)
T ss_pred             HHHHHHHHHHhc--CCE---EEecCeEEEEECCHHHHHHHHhC
Confidence            567889999999  554   333 3667889999999999886


No 49 
>KOG3302 consensus TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=27.13  E-value=18  Score=30.48  Aligned_cols=56  Identities=25%  Similarity=0.386  Sum_probs=35.8

Q ss_pred             CCCCCCCCCCcccccCCCCCccccCCCCCCCCcc-----------hHHHHHHHHHHHHHHHhhcccc
Q 036575          439 NEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPG-----------KALGLATVELWLAQLLQSFKWV  494 (528)
Q Consensus       439 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G-----------~~~A~~~~~~~l~~ll~~f~~~  494 (528)
                      -+|+|.||-.-=.....+...-.-|+.|.=.|-|           +.+|+..-++-...-+++|++.
T Consensus        50 ~ey~Pk~~~aVimrir~P~~ta~I~ssGKi~ctgA~se~~ar~aark~aRilqkLgf~~~f~~fki~  116 (200)
T KOG3302|consen   50 AEYNPKRFAAVIMRIRSPRTTALIFSSGKIVCTGAKSEDSARLAARKYARILQKLGFPVKFRDFKIN  116 (200)
T ss_pred             cccCcccccEEEEEEcCCceEEEEecCCcEEEeccCCHHHHHHHHHHHHHHHHHcCCCceehheeeE
Confidence            5699999875221222245567889999999998           4555555555555555555443


No 50 
>PF14550 Peptidase_U35_2:  Putative phage protease XkdF
Probab=26.92  E-value=37  Score=26.56  Aligned_cols=32  Identities=28%  Similarity=0.555  Sum_probs=22.5

Q ss_pred             cccccceeeecceeeCCCCEEEEeccccccCCCCC
Q 036575          401 ARLAIHDTQVGQHLVPAGTTAMVNMWSITHDEEVW  435 (528)
Q Consensus       401 ~R~~~~d~~l~g~~Ip~g~~v~~~~~~~~~d~~~~  435 (528)
                      .-++++|..++|..||+|+.|+.   .--.|+++|
T Consensus        70 S~I~~~d~~~~g~~i~~GtWv~~---~k~~ddelW  101 (122)
T PF14550_consen   70 SYIAPEDMEIGGETIPKGTWVVG---VKITDDELW  101 (122)
T ss_pred             EEecCCCcccCCeeecceEEEEE---EEecCHHHH
Confidence            34556799999999999999854   222345555


No 51 
>PRK13713 conjugal transfer protein TraM; Provisional
Probab=26.90  E-value=3e+02  Score=21.28  Aligned_cols=76  Identities=22%  Similarity=0.320  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcHHHHHhhc----------CCCCCCCHHHHHHHHHHHHHhhccchHHHH
Q 036575          270 VNSFVSKIIEEHKVKRINKNINGGCCDVDEGDFVDVLLGL----------DGENRLTDSDMIAVLWEMIFRGTDTVAILL  339 (528)
Q Consensus       270 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~----------~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~l  339 (528)
                      ..+-+..++++|++++..+.      +..-.+..+.|++.          ..+++++..+--..++....-...|++..|
T Consensus         5 v~e~I~~iVe~RrqEGA~~~------Dvs~SSv~sMLLELGLRVYeaQ~erkes~Fnq~eFnK~lLE~v~kt~~~~~~IL   78 (118)
T PRK13713          5 VYEKINAIVEERRQEGAREK------DVSFSSVASMLLELGLRVYEAQMERKESGFNQTEFNKLLLECVVKTQSTVAKIL   78 (118)
T ss_pred             HHHHHHHHHHHHHHcCCCcc------CccHHHHHHHHHHHhHHHHHHHHHhhcCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34456677888887764211      13334556666642          244578888877777777776666666655


Q ss_pred             HHHH--HHHhhChH
Q 036575          340 EWIL--ARMVLHPD  351 (528)
Q Consensus       340 ~~~l--~~l~~~p~  351 (528)
                      ....  -++..+|.
T Consensus        79 ~~~~lsp~v~~~~~   92 (118)
T PRK13713         79 GIESLSPHVSGNPK   92 (118)
T ss_pred             ccccccHhhcCCCc
Confidence            4332  35555554


No 52 
>PF05261 Tra_M:  TraM protein, DNA-binding;  InterPro: IPR007925 The TraM protein is an essential part of the DNA transfer machinery of the conjugative resistance plasmid R1 (IncFII). On the basis of mutational analyses, it was shown that the essential transfer protein TraM has at least two functions. First, a functional TraM protein was found to be required for normal levels of transfer gene expression. Second, experimental evidence was obtained that TraM stimulates efficient site-specific single-stranded DNA cleavage at the oriT, in vivo. Furthermore, a specific interaction of the cytoplasmic TraM protein with the membrane protein TraD was demonstrated, suggesting that the TraM protein creates a physical link between the relaxosomal nucleoprotein complex and the membrane-bound DNA transfer apparatus [].; GO: 0003677 DNA binding, 0000746 conjugation; PDB: 3ON0_A 3OMY_B 1DP3_A 2G9E_A 3D8A_B 2G7O_A.
Probab=26.53  E-value=3.2e+02  Score=21.44  Aligned_cols=91  Identities=22%  Similarity=0.236  Sum_probs=50.8

Q ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCCCCCCcHHHHHhhc----------CCCCCCCHHHHHHHHHHHHHhhccchHHH
Q 036575          269 KVNSFVSKIIEEHKVKRINKNINGGCCDVDEGDFVDVLLGL----------DGENRLTDSDMIAVLWEMIFRGTDTVAIL  338 (528)
Q Consensus       269 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~d~l~~ll~~----------~~~~~l~~~ei~~~~~~~~~Ag~dtt~~~  338 (528)
                      ....-+..++++++++....      ++..-.+..+.|++.          ..+++++.++....++........+++..
T Consensus        11 ~v~~~I~~iVe~r~qeGA~~------~dvs~SSv~smLlELGLrVY~~Q~E~k~s~Fnq~eFnk~lLe~v~kt~~~~~~I   84 (127)
T PF05261_consen   11 KVLEEINDIVEERRQEGATE------KDVSFSSVSSMLLELGLRVYEAQMERKESGFNQEEFNKVLLENVSKTRFTVSKI   84 (127)
T ss_dssp             CHHHHHHHHHHHHHCCT-TT------TT--HHHHHHHHHHCCCCHHHHCCHHCSSS--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCc------ccccHHHHHHHHHHHhHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            44555677788887765421      112334566677752          13458899888888777777777777776


Q ss_pred             HHHH--HHHHhhC---------hHHHHHHHHHHhHhhC
Q 036575          339 LEWI--LARMVLH---------PDIQAKAQIEIDNTVG  365 (528)
Q Consensus       339 l~~~--l~~l~~~---------p~~q~~l~~Ei~~~~~  365 (528)
                      |...  .-++..+         +++.++++++++..+.
T Consensus        85 Lg~~~ls~~v~~~~~~ey~~m~~~I~~~v~e~m~~FFp  122 (127)
T PF05261_consen   85 LGMSSLSPEVKGNPKFEYENMVEKIREKVSEEMERFFP  122 (127)
T ss_dssp             HHHHHCSHHHCCHCGG-HHHHHHHHHHHHHHHHHHHS-
T ss_pred             HHHhhccHhhccCCcccHHHHHHHHHHHHHHHHHhcCC
Confidence            6654  2344433         3445555555555544


No 53 
>KOG0114 consensus Predicted RNA-binding protein (RRM superfamily) [General function prediction only]
Probab=25.70  E-value=2.9e+02  Score=20.90  Aligned_cols=60  Identities=15%  Similarity=0.088  Sum_probs=37.8

Q ss_pred             CCCCCCCCCCcccccchhhcCCchHHHHHHHHHhcCCCCeEEEEcC------CeeEEEecCHHHHHHHhhc
Q 036575           49 RTAIPGPSGLPILGMVLAFTGSLTHRVLAKLAVSFRAKPLMAFSVG------FTRFVISSHPDTAKEILNS  113 (528)
Q Consensus        49 ~~~~PgP~~~p~~G~~~~~~~~~~~~~~~~~~~ky~~g~v~~v~lg------~~~~v~i~dp~~v~~i~~~  113 (528)
                      .+.+|-.-.+-++-|+..-.   ..+..-++.-+|  |+|..+++|      |.-+||-.|-..++..++.
T Consensus        11 ~rlppevnriLyirNLp~~I---TseemydlFGky--g~IrQIRiG~~k~TrGTAFVVYedi~dAk~A~dh   76 (124)
T KOG0114|consen   11 IRLPPEVNRILYIRNLPFKI---TSEEMYDLFGKY--GTIRQIRIGNTKETRGTAFVVYEDIFDAKKACDH   76 (124)
T ss_pred             CCCChhhheeEEEecCCccc---cHHHHHHHhhcc--cceEEEEecCccCcCceEEEEehHhhhHHHHHHH
Confidence            34444443344555553211   234455566778  899999998      3457888888888877775


No 54 
>COG2101 SPT15 TATA-box binding protein (TBP), component of TFIID and TFIIIB [Transcription]
Probab=24.57  E-value=25  Score=29.11  Aligned_cols=36  Identities=28%  Similarity=0.433  Sum_probs=25.4

Q ss_pred             CCCCCCCCCCcccccCCCCCccccCCCCCCCCcchH
Q 036575          439 NEFKPERFLYEDVNIMGSNLRLAPFGSGRRVCPGKA  474 (528)
Q Consensus       439 ~~F~P~R~l~~~~~~~~~~~~~~~Fg~G~r~C~G~~  474 (528)
                      -+|+|++|=.-=.....++...+-|..|+-.|-|..
T Consensus        35 aeYnP~qFpGlv~Rl~ePk~a~LIF~SGK~VcTGaK   70 (185)
T COG2101          35 AEYNPEQFPGLVYRLEEPKTAALIFRSGKVVCTGAK   70 (185)
T ss_pred             CccCHhHCCeeEEEecCCcceEEEEecCcEEEeccC
Confidence            368999986421112225667899999999999953


No 55 
>PF11227 DUF3025:  Protein of unknown function (DUF3025);  InterPro: IPR021390  Some members in this bacterial family of proteins are annotated as transmembrane proteins however this cannot be confirmed. Currently this family of proteins has no known function. 
Probab=23.90  E-value=49  Score=28.65  Aligned_cols=20  Identities=25%  Similarity=0.737  Sum_probs=17.7

Q ss_pred             cccccCCCCCCCCCCCCCCC
Q 036575          426 WSITHDEEVWPEANEFKPER  445 (528)
Q Consensus       426 ~~~~~d~~~~~~p~~F~P~R  445 (528)
                      +..|.|+.+|.|...|+|-|
T Consensus       192 ~~~n~~~~FY~d~~~FRp~R  211 (212)
T PF11227_consen  192 WPDNEDPAFYDDTDVFRPGR  211 (212)
T ss_pred             CCCCCCcccccCccccCCCC
Confidence            34489999999999999988


No 56 
>PF07886 BA14K:  BA14K-like protein;  InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process []. 
Probab=22.91  E-value=78  Score=17.83  Aligned_cols=16  Identities=25%  Similarity=0.632  Sum_probs=12.8

Q ss_pred             CCCccccCCCCCCCCc
Q 036575          456 SNLRLAPFGSGRRVCP  471 (528)
Q Consensus       456 ~~~~~~~Fg~G~r~C~  471 (528)
                      ....++++++..|.|.
T Consensus        16 ~~~Ty~~~~G~r~~C~   31 (31)
T PF07886_consen   16 RDNTYQPYDGPRRFCR   31 (31)
T ss_pred             CCCcEeCCCCccccCc
Confidence            4457999999899884


No 57 
>PRK13467 F0F1 ATP synthase subunit C; Provisional
Probab=21.68  E-value=1.4e+02  Score=20.47  Aligned_cols=24  Identities=8%  Similarity=0.223  Sum_probs=20.2

Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHH
Q 036575          336 AILLEWILARMVLHPDIQAKAQIE  359 (528)
Q Consensus       336 ~~~l~~~l~~l~~~p~~q~~l~~E  359 (528)
                      +.+.+.++--++|+||.+.+++.-
T Consensus        20 G~v~~~a~e~iaRqPE~~~~i~~~   43 (66)
T PRK13467         20 GFLMANLFKSAARQPEMIGQLRSL   43 (66)
T ss_pred             HHHHHHHHHHHHcChhHHHhHHHH
Confidence            556777888999999999999864


No 58 
>cd08780 Death_TRADD Death Domain of Tumor Necrosis Factor Receptor 1-Associated Death Domain protein. Death domain (DD) of TRADD (TNF Receptor 1-Associated Death Domain or TNFRSF1A-associated via death domain) protein. TRADD is a central signaling adaptor for TNF-receptor 1 (TNFR1), mediating activation of Nuclear Factor -kappaB (NF-kB) and c-Jun N-terminal kinase (JNK), as well as caspase-dependent apoptosis. It also carries important immunological roles including germinal center formation, DR3-mediated T-cell stimulation, and TNFalpha-mediated inflammatory responses. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into s
Probab=21.46  E-value=3.1e+02  Score=20.07  Aligned_cols=42  Identities=10%  Similarity=0.178  Sum_probs=30.1

Q ss_pred             CChHHHHHHhhhhc---cCCcHHHHhHhH-----hhHHHHHHHHHHHHHHH
Q 036575          139 FGEYWRNLRRISGT---HLFSPKRMSVLG-----KFRETVGLKMVKEIRVL  181 (528)
Q Consensus       139 ~g~~w~~~R~~~~~---~~f~~~~l~~~~-----~~~~~~~~~l~~~l~~~  181 (528)
                      -|..||..-|.+ .   .+++...|.+..     .-+.+.+-+++..|...
T Consensus        12 vGr~WK~laR~L-g~~cral~d~~ID~I~~~y~r~gL~EqvyQ~L~~W~~~   61 (90)
T cd08780          12 VGKKWKPVGRSL-QKNCRALRDPAIDNLAYEYDREGLYEQAYQLLRRFIQS   61 (90)
T ss_pred             HhHHHHHHHHHH-cccccccchhHHHHHHhhcccccHHHHHHHHHHHHHHh
Confidence            478999998877 4   236666676654     33677888888888876


No 59 
>PRK13991 cell division topological specificity factor MinE; Provisional
Probab=20.78  E-value=2.1e+02  Score=20.90  Aligned_cols=18  Identities=6%  Similarity=0.388  Sum_probs=15.5

Q ss_pred             ChHHHHHHHHHHhHhhCC
Q 036575          349 HPDIQAKAQIEIDNTVGT  366 (528)
Q Consensus       349 ~p~~q~~l~~Ei~~~~~~  366 (528)
                      .|++.+.+++||-+++..
T Consensus        35 ~p~~l~~lk~eil~VIsK   52 (87)
T PRK13991         35 TPEMMEQMKADLAEVIKR   52 (87)
T ss_pred             CHHHHHHHHHHHHHHHHH
Confidence            599999999999988653


No 60 
>PF10264 Stork_head:  Winged helix Storkhead-box1 domain;  InterPro: IPR019391 In humans the Storkhead-box protein controls polyploidization of extravillus trophoblast and is implicated in pre-eclampsia []. This entry represents the conserved N-terminal winged-helix domain, which is likely to bind DNA.
Probab=20.10  E-value=1.1e+02  Score=21.87  Aligned_cols=36  Identities=14%  Similarity=0.283  Sum_probs=25.2

Q ss_pred             HHHHHHHHHHHhh--ChHHHHHHHHHHhHhhCCCCCCC
Q 036575          336 AILLEWILARMVL--HPDIQAKAQIEIDNTVGTARLVS  371 (528)
Q Consensus       336 ~~~l~~~l~~l~~--~p~~q~~l~~Ei~~~~~~~~~~~  371 (528)
                      +-+++|+...|-+  .+.-+|.|++.+.+...+-..|+
T Consensus        13 ~EvlC~~I~dln~~~~~at~E~l~~~L~~~yp~i~~Ps   50 (80)
T PF10264_consen   13 PEVLCWVISDLNAAGQPATQETLREHLRKHYPGIAIPS   50 (80)
T ss_pred             HHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCCCC
Confidence            4567777777754  46789999999988876433343


Done!