BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036577
(470 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 303 bits (775), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 149/396 (37%), Positives = 236/396 (59%), Gaps = 11/396 (2%)
Query: 71 RERFKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
RER +S I I ++A +F M+ RP P V F+ F +A+ K ++ VL
Sbjct: 57 RERLRSG----IVDIKKDDAIALFQEMIRSRPLPSLVD-FSRFFSAIARTKQFNLVLDFC 111
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAE 190
K+L G+ ++YT NI+INCFC+ + + VLG++++ + PD TFN+LIKGL E
Sbjct: 112 KQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLE 171
Query: 191 SRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCE 250
++ EA L ++ GC+P+V+TY++++NG+CR+G T +AL+L +M N +
Sbjct: 172 GKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VK 225
Query: 251 PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 310
+ TY+TIID LC++G +D A LF +M+ + I +VVTYNSL+ G C A WN+ L
Sbjct: 226 ADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALL 285
Query: 311 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 370
L +M+ + + PNV+TFNV++D K GK+ EA+ L MI G+ PN YNTLMDG+C+
Sbjct: 286 LKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCM 345
Query: 371 TGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 430
R++ A + M N+C D+ +++ LI GYC K ++ + ++ + +G+ + V
Sbjct: 346 QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Query: 431 YNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTY 466
Y+ L G + +++ A +LF EM GV D TY
Sbjct: 406 YSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 189/370 (51%), Gaps = 6/370 (1%)
Query: 101 RPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSP 160
R V +++ + L ++ D +SLFK + + G+ + TYN L+ CK G+ +
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 161 GFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLIN 220
G ++L ++ P+ +TFN L+ E ++ EA L+ ++ G PN+ITY+TL++
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341
Query: 221 GLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 280
G C A N+ + M C P+ VT+T++I G C VD ++F +
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNK------CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 281 DENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 340
+ N VTY+ L+ GFC + A+ L EM+ GV P+V+T+ +++D LC NGK++
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLE 455
Query: 341 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILI 400
+A + + + + + +Y T+++G C G+V A LF S+ +V +Y+++I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 401 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVA 460
+G CK + A L +M G P+ YNTL + + KL +EM+ G +
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 461 ADTWTYRTFI 470
AD + + I
Sbjct: 576 ADASSIKMVI 585
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 160/301 (53%), Gaps = 6/301 (1%)
Query: 101 RPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSP 160
R P V +FN+L K L+K + + G+ P++ TYN L++ +C R+S
Sbjct: 292 REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE 351
Query: 161 GFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLIN 220
+L ++R+ +PD VTF SLIKG C R+ + +F + G N +TYS L+
Sbjct: 352 ANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 221 GLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 280
G C++G +A LF+EM + GV+ P+ +TY ++DGLC G ++KA E+F ++
Sbjct: 412 GFCQSGKIKLAEELFQEMVSH----GVL--PDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Query: 281 DENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 340
++ +V Y ++I G C +A L + +GV+PNV+T+ V++ LCK G +
Sbjct: 466 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 525
Query: 341 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILI 400
EA+ LL M + G PN YNTL+ G + + +L M+S D S ++I
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Query: 401 N 401
+
Sbjct: 586 D 586
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 265 KEGFVDKAKE----LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQ 320
+ G VD K+ LF +M P++V ++ +N ++ G+
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 321 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 380
N+ T N++++ C+ K A +L ++++G P+ +NTL+ G L G+V+ A L
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 381 FVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 440
M N C DV +Y+ ++NG C++ + AL L +M + +K DV Y+T+ L
Sbjct: 181 VDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCR 240
Query: 441 IHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
++ A LF EM G+ + TY + +
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 294 bits (752), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 164/441 (37%), Positives = 236/441 (53%), Gaps = 50/441 (11%)
Query: 73 RFKSSGEGDITTITPN--------EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYD 124
R SSG GD I N +A +F M+ RP P V FN L +AK K +D
Sbjct: 44 RAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFD 102
Query: 125 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLI 184
V+SL +++ + LYTYNILINCFC+ ++S +LG++++ + P VT +SL+
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 185 KGLCAESRIM-----------------------------------EAAALFTKLKAFGCE 209
G C RI EA AL ++ GC+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFV 269
PN++TY ++NGLC+ G T +ALNL +M E + V + TIID LCK V
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK------IEADVVIFNTIIDSLCKYRHV 276
Query: 270 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 329
D A LF +M+ + I PNVVTY+SLI C W++A LL +M+++ + PN+VTFN +
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336
Query: 330 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRC 389
+D K GK EA +L D MI+ + P+ F YN+L++GFC+ R+++AK++F M S C
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396
Query: 390 MHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 449
DV +Y+ LI G+CK+K +E L+ EM +G+ D V Y TL GLF + A K
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456
Query: 450 LFDEMRRDGVAADTWTYRTFI 470
+F +M DGV D TY +
Sbjct: 457 VFKQMVSDGVPPDIMTYSILL 477
Score = 212 bits (539), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 204/412 (49%), Gaps = 30/412 (7%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A + D M+ M P ++ ++ G NK + V +L R+ G P+L TY +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGV 230
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
++N CK G +L ++ + D V FN++I LC + +A LF +++ G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANG-------------------------- 241
PNV+TYS+LI+ LC G A L +M
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 242 ---NGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 298
+ I +P+ TY ++++G C +DKAK++F M ++ P+VVTYN+LI GF
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 299 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 358
C + + L EM +G+ + VT+ ++ L +G D A ++ M+ GV P+
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 359 FVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSE 418
Y+ L+DG C G++ +A E+F M+ + D++ Y+ +I G CK +++ L+
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 419 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ KG+KP+VV YNT+ GL ++ A+ L +M+ DG ++ TY T I
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 179/381 (46%), Gaps = 76/381 (19%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPG-------- 161
FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 162 -----------------FVVLGR----------ILRSCFTPDAVTFNSLIKGLCAESRIM 194
FV G+ +++ PD T+NSL+ G C R+
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 195 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTV 254
+A +F + + C P+V+TY+TLI G C++ LF EM++ G +G +TV
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVG-----DTV 436
Query: 255 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEM 314
TYTT+I GL +G D A+++F +M + + P+++TY
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY----------------------- 473
Query: 315 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 374
++++D LC NGK+++A + D M + ++ + ++Y T+++G C G+V
Sbjct: 474 ------------SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 375 NRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 434
+ +LF S+ +V +Y+ +I+G C + ++ A +L +M G P+ YNTL
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Query: 435 FIGLFEIHQVERAFKLFDEMR 455
+ +L EMR
Sbjct: 582 IRAHLRDGDKAASAELIREMR 602
Score = 157 bits (397), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 151/298 (50%), Gaps = 8/298 (2%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P + +FN L K + L+ + + PD++TYN L+N FC R+ +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 165 LG-RILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLC 223
+ + CF PD VT+N+LIKG C R+ + LF ++ G + +TY+TLI GL
Sbjct: 388 FEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 224 RTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 283
G A +F++M + GV P+ +TY+ ++DGLC G ++KA E+F M+
Sbjct: 447 HDGDCDNAQKVFKQMVSD----GV--PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 284 INPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 343
I ++ Y ++I G C A ++ L + +GV+PNVVT+N ++ LC + EA
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 344 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILIN 401
LL M + G PN+ YNTL+ G + EL M S R + D + ++ N
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Score = 85.9 bits (211), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 69/135 (51%)
Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFV 163
PP + +++IL L N + L +F + + + D+Y Y +I CK G+V G+
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 164 VLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLC 223
+ + P+ VT+N++I GLC++ + EA AL K+K G PN TY+TLI
Sbjct: 527 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHL 586
Query: 224 RTGHTIVALNLFEEM 238
R G + L EM
Sbjct: 587 RDGDKAASAELIREM 601
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 289 bits (739), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 158/424 (37%), Positives = 239/424 (56%), Gaps = 33/424 (7%)
Query: 76 SSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNS 135
SSG + I ++A +F M+ RP P V FN LF +AK K Y+ VL+L K++ S
Sbjct: 61 SSG---LVGIKADDAVDLFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMES 116
Query: 136 TGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIME 195
G+ +YT +I+INCFC+ ++S F +G+I++ + PD V FN+L+ GLC E R+ E
Sbjct: 117 KGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSE 176
Query: 196 AAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGE---------IG 246
A L ++ G +P +IT +TL+NGLC G A+ L + M + +
Sbjct: 177 ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN 236
Query: 247 VVCEP--------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 286
V+C+ + V Y+ IIDGLCK+G +D A LF +M+ +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 296
Query: 287 NVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 346
+++TYN+LI GFC A W++ LL +M+ + + PNVVTF+V++D K GK+ EA +LL
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 347 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKN 406
M+Q G+ PN YN+L+DGFC R+ A ++ M S C D+ +++ILINGYCK
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 407 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTY 466
I+ L L+ EM +G+ + V YNTL G + ++E A KLF EM V D +Y
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 467 RTFI 470
+ +
Sbjct: 477 KILL 480
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 196/383 (51%), Gaps = 7/383 (1%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A + D M+ P V+ + + + K+ + L +++ + D Y+I
Sbjct: 210 SDAVVLIDRMVETGFQPNEVT-YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI 268
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+I+ CK G + F + + F D +T+N+LI G C R + A L +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
PNV+T+S LI+ + G A L +EM + G+ PNT+TY ++IDG CKE
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMM----QRGIA--PNTITYNSLIDGFCKEN 382
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
+++A ++ M + +P+++T+N LI+G+C AN ++ L EM +GV N VT+N
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
++ C++GK++ A +L M+ VRP+ Y L+DG C G + +A E+F +E +
Sbjct: 443 TLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKS 502
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 447
+ D+ Y I+I+G C +++ A L+ + KG+K D YN + L + +A
Sbjct: 503 KMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Query: 448 FKLFDEMRRDGVAADTWTYRTFI 470
LF +M +G A D TY I
Sbjct: 563 DILFRKMTEEGHAPDELTYNILI 585
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 185/361 (51%), Gaps = 6/361 (1%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 169
++I+ L K+ D +LF + G D+ TYN LI FC GR G +L ++
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 170 RSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI 229
+ +P+ VTF+ LI E ++ EA L ++ G PN ITY++LI+G C+
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 230 VALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 289
A+ + + M I C+P+ +T+ +I+G CK +D ELF +M + N V
Sbjct: 386 EAIQMVDLM------ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 290 TYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 349
TYN+L+ GFC + AK L EM+ + V+P++V++ +++D LC NG++++A + +
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 350 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEI 409
+ + + +Y ++ G C +V+ A +LF S+ D +Y+I+I+ C+ +
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 410 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTF 469
A L+ +M +G PD + YN L A +L +EM+ G AD T +
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 470 I 470
I
Sbjct: 620 I 620
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 150/301 (49%), Gaps = 6/301 (1%)
Query: 101 RPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSP 160
R P V +F++L K L K + G+ P+ TYN LI+ FCK R+
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEE 386
Query: 161 GFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLIN 220
++ ++ PD +TFN LI G C +RI + LF ++ G N +TY+TL+
Sbjct: 387 AIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQ 446
Query: 221 GLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 280
G C++G VA LF+EM + P+ V+Y ++DGLC G ++KA E+F K++
Sbjct: 447 GFCQSGKLEVAKKLFQEMVSRR------VRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 281 DENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 340
+ ++ Y +IHG C A+ ++A L + +GV+ + +N+++ ELC+ +
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 341 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILI 400
+A L M + G P+ YN L+ A EL M+S+ DV + ++I
Sbjct: 561 KADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Query: 401 N 401
N
Sbjct: 621 N 621
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 32/278 (11%)
Query: 101 RPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSP 160
R P ++N L K + + + + S G PD+ T+NILIN +CK R+
Sbjct: 362 RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDD 421
Query: 161 GFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLIN 220
G + + + VT+N+L++G C ++ A LF ++ + P++++Y L++
Sbjct: 422 GLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 221 GLCRTGHTIVALNLFEEMANGNGEIGV---------VCEPNTV----------------- 254
GLC G AL +F ++ E+ + +C + V
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 255 ---TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLL 311
Y +I LC++ + KA LF KM +E P+ +TYN LI +D A L+
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELI 601
Query: 312 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 349
EM G +V T ++++ L +G++D++ LD++
Sbjct: 602 EEMKSSGFPADVSTVKMVINML-SSGELDKS--FLDML 636
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 288 bits (738), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/418 (37%), Positives = 233/418 (55%), Gaps = 42/418 (10%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A +F M+ RP P V FN L +AK +D V+SL +R+ + + DLY+YNI
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVE-FNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAAL-------- 199
LINCFC+ ++ VLG++++ + PD VT +SL+ G C RI EA AL
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 200 ---------------------------FTKLKAFGCEPNVITYSTLINGLCRTGHTIVAL 232
++ A GC+P++ TY T++NGLC+ G +AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 233 NLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 292
+L ++M G E + V YTTIID LC V+ A LF +M ++ I PNVVTYN
Sbjct: 241 SLLKKMEKGK------IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 293 SLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 352
SLI C W++A LL +M+++ + PNVVTF+ ++D K GK+ EA +L D MI+
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 353 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGA 412
+ P+ F Y++L++GFC+ R++ AK +F M S C +V +Y+ LI G+CK K +E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 413 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ L+ EM +G+ + V YNTL GLF+ + A K+F +M DGV D TY +
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL 472
Score = 219 bits (559), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/412 (31%), Positives = 204/412 (49%), Gaps = 30/412 (7%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M M P V+ ++ G NK + V +L R+ + G PDL+TY
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV-ALIDRMVARGCQPDLFTYGT 225
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
++N CK G + +L ++ + D V + ++I LC + +A LFT++ G
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG 285
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC------------------ 249
PNV+TY++LI LC G A L +M VV
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 250 -----------EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 298
+P+ TY+++I+G C +D+AK +F M ++ PNVVTYN+LI GF
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 299 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 358
C A E L EM +G+ N VT+N ++ L + G D A ++ M+ GV P+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 359 FVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSE 418
Y+ L+DG C G++ +A +F ++ ++ D+++Y+I+I G CK ++E L+
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 419 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ KG+KP+V+IY T+ G E A LF EM+ DG ++ TY T I
Sbjct: 526 LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Score = 178 bits (452), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 183/362 (50%), Gaps = 11/362 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N+A +F M N + P V ++N L CL + L + + P++ T++
Sbjct: 272 NDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 330
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F K G++ + +++ PD T++SLI G C R+ EA +F + +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
C PNV+TY+TLI G C+ + LF EM+ G +G NTVTY T+I GL + G
Sbjct: 391 CFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVG-----NTVTYNTLIQGLFQAG 444
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
D A+++F KM + + P+++TY+ L+ G C +A + + ++P++ T+N
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYN 504
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
++++ +CK GK+++ L + GV+PN +Y T++ GFC G A LF M+ +
Sbjct: 505 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED 564
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV----VIYNTLFIGLFEIHQ 443
+ + +Y+ LI ++ + + L EM S G D ++ N L G E
Sbjct: 565 GTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624
Query: 444 VE 445
+E
Sbjct: 625 LE 626
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 102/202 (50%)
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
+D A +LF +M P++V +N L+ N ++ L M + + ++ ++N+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNR 388
+++ C+ ++ A +L M+++G P+ ++L++G+C R++ A L M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 389 CMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 448
+ +++ LI+G + + A++L M+++G +PD+ Y T+ GL + ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 449 KLFDEMRRDGVAADTWTYRTFI 470
L +M + + AD Y T I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTII 262
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Query: 327 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 386
NV++D K+D+A L M+Q P+ +N L+ + + L M++
Sbjct: 54 NVLLDL-----KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQN 108
Query: 387 NRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 446
R +D++SY+ILIN +C+ ++ AL++ +M+ G +PD+V ++L G ++
Sbjct: 109 LRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISE 168
Query: 447 AFKLFDEMRRDGVAADTWTYRTFI 470
A L D+M +T T+ T I
Sbjct: 169 AVALVDQMFVMEYQPNTVTFNTLI 192
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 286 bits (731), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/441 (35%), Positives = 237/441 (53%), Gaps = 50/441 (11%)
Query: 73 RFKSSGEGDITTITPN--------EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYD 124
R SSG GD I N +A +F M+ RP P + FN L +AK K +D
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFD 102
Query: 125 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLI 184
V+SL +++ G+ +LYTYNILINCFC+ ++S +LG++++ + P VT +SL+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 185 KGLCAESRI-----------------------------------MEAAALFTKLKAFGCE 209
G C RI EA AL ++ GC+
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFV 269
PN++TY ++NGLC+ G +A NL +M E N V Y+T+ID LCK
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK------IEANVVIYSTVIDSLCKYRHE 276
Query: 270 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 329
D A LF +M+++ + PNV+TY+SLI C W++A LL +M+++ + PNVVTFN +
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336
Query: 330 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRC 389
+D K GK+ EA +L D MI+ + P+ F Y++L++GFC+ R++ AK +F M S C
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396
Query: 390 MHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 449
+V +Y+ LING+CK K I+ + L+ EM +G+ + V Y TL G F+ + A
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456
Query: 450 LFDEMRRDGVAADTWTYRTFI 470
+F +M DGV + TY T +
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLL 477
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 284 bits (727), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 231/418 (55%), Gaps = 42/418 (10%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA +F M+ RP P V F+ L +AK K +D V+S +++ G+ +LYTYNI
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+INC C+ ++S +LG++++ + P VT NSL+ G C +RI EA AL ++ G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 208 -----------------------------------CEPNVITYSTLINGLCRTGHTIVAL 232
C+P+++TY +INGLC+ G +AL
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 233 NLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 292
NL +M G E + V Y+T+ID LCK VD A LF +M ++ I P+V TY+
Sbjct: 226 NLLNKMEKGK------IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYS 279
Query: 293 SLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 352
SLI C W++A LL +M+++ + PNVVTFN ++D K GK+ EA +L D MIQ
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 353 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGA 412
+ PN YN+L++GFC+ R++ A+++F M S C+ DV +Y+ LING+CK K++
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 413 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ L+ +M +G+ + V Y TL G F+ + A +F +M DGV + TY T +
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLL 457
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 207/418 (49%), Gaps = 42/418 (10%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M+ M P V+ ++ G NK + V +L +R+ G PDL TY
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGA 210
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+IN CK G +L ++ + D V ++++I LC + +A LFT++ G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 208 CEPNVITYSTLINGLC-----------------------------------RTGHTIVAL 232
P+V TYS+LI+ LC + G I A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 233 NLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 292
LF+EM I +PN VTY ++I+G C +D+A+++F M ++ P+VVTYN
Sbjct: 331 KLFDEM------IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 293 SLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 352
+LI+GFC A + L +M +G+ N VT+ ++ + D A + M+
Sbjct: 385 TLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD 444
Query: 353 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGA 412
GV PN YNTL+DG C G++ +A +F ++ ++ D+++Y+I+ G CK ++E
Sbjct: 445 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDG 504
Query: 413 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
L+ + KG+KPDV+ YNT+ G + E A+ LF +M+ DG D+ TY T I
Sbjct: 505 WDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLI 562
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 185/374 (49%), Gaps = 42/374 (11%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 169
++ + L K +H D L+LF +++ G+ PD++TY+ LI+C C GR S +L +L
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 170 RSCFTPDAVTFNSLIK-----------------------------------GLCAESRIM 194
P+ VTFNSLI G C R+
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLD 362
Query: 195 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTV 254
EA +FT + + C P+V+TY+TLING C+ + + LF +M+ G +G NTV
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR-RGLVG-----NTV 416
Query: 255 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEM 314
TYTT+I G + D A+ +F +M + ++PN++TYN+L+ G C +A + +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 315 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 374
++P++ T+N++ + +CK GK+++ L + GV+P+ YNT++ GFC G
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 375 NRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 434
A LF+ M+ + + D +Y+ LI + ++ + + L EM S D Y L
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYG-L 595
Query: 435 FIGLFEIHQVERAF 448
+ ++++ F
Sbjct: 596 VTDMLHDGRLDKGF 609
Score = 139 bits (349), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 162/319 (50%), Gaps = 8/319 (2%)
Query: 152 FCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPN 211
F + + SP F + G I S + D L + ++ EA LF ++ P+
Sbjct: 7 FVHLRKASPSFCLRG-IYFSGLSYDGYR-EKLSRNALLHLKLDEAVDLFGEMVKSRPFPS 64
Query: 212 VITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDK 271
++ +S L++ + + + ++ E+M +GV N TY +I+ LC+ +
Sbjct: 65 IVEFSKLLSAIAKMKKFDLVISFGEKME----ILGV--SHNLYTYNIMINCLCRRSQLSF 118
Query: 272 AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 331
A + KM P++VT NSL++GFC+ N +EA L+ +M++ G QP+ VTF ++
Sbjct: 119 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 332 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMH 391
L ++ K EA L++ M+ G +P+ Y +++G C G + A L ME +
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 392 DVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 451
DV YS +I+ CK + ++ AL+L++EM +KGI+PDV Y++L L + A +L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 452 DEMRRDGVAADTWTYRTFI 470
+M + + T+ + I
Sbjct: 299 SDMLERKINPNVVTFNSLI 317
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 3/97 (3%)
Query: 98 LNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 157
L+++ P V ++N + K + +LF ++ G PD TYN LI + G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 158 VSPGFVVLGRILRSC-FTPDAVTFNSLIKGLCAESRI 193
+ ++ + +RSC F DA T+ L+ + + R+
Sbjct: 571 KAASAELI-KEMRSCRFAGDASTY-GLVTDMLHDGRL 605
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 283 bits (723), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/409 (36%), Positives = 224/409 (54%), Gaps = 42/409 (10%)
Query: 97 MLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 156
M+ RP P + FN L +AK K +D V+SL +++ G+ +LYTYNILINCFC+
Sbjct: 1 MVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 157 RVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIM---------------------- 194
++S +LG++++ + P VT +SL+ G C RI
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 195 -------------EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANG 241
EA AL ++ GC+PN++TY ++NGLC+ G +A NL +M
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 242 NGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA 301
E + V + TIID LCK VD A LF +M+ + I PNVVTY+SLI C
Sbjct: 180 K------IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSY 233
Query: 302 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 361
W++A LL +M+++ + PN+VTFN ++D K GK EA +L D MI+ + P+ F Y
Sbjct: 234 GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Query: 362 NTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLS 421
N+L++GFC+ R+++AK++F M S C D+ +Y+ LI G+CK+K +E L+ EM
Sbjct: 294 NSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH 353
Query: 422 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+G+ D V Y TL GLF + A K+F +M DGV D TY +
Sbjct: 354 RGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 121/412 (29%), Positives = 205/412 (49%), Gaps = 30/412 (7%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A + D M+ M P ++ ++ G NK + V +L R+ G P+L TY +
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV-ALVDRMVQRGCQPNLVTYGV 155
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
++N CK G + F +L ++ + D V FN++I LC + +A LF +++ G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANG-------------------------- 241
PNV+TYS+LI+ LC G A L +M
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 242 ---NGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 298
+ I +P+ TY ++I+G C +DKAK++F M ++ P++ TYN+LI GF
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 299 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 358
C + + L EM +G+ + VT+ ++ L +G D A ++ M+ GV P+
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 359 FVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSE 418
Y+ L+DG C G++ +A E+F M+ + D++ Y+ +I G CK +++ L+
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 455
Query: 419 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ KG+KP+VV YNT+ GL ++ A+ L +M+ DG D+ TY T I
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 165 bits (418), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 180/391 (46%), Gaps = 76/391 (19%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPG-------- 161
FN + L K +H D L+LFK + + G+ P++ TY+ LI+C C GR S
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 162 -----------------FVVLGR----------ILRSCFTPDAVTFNSLIKGLCAESRIM 194
FV G+ +++ PD T+NSLI G C R+
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 195 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTV 254
+A +F + + C P++ TY+TLI G C++ LF EM++ G +G +TV
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSH-RGLVG-----DTV 361
Query: 255 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEM 314
TYTT+I GL +G D A+++F +M + + P+++TY
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY----------------------- 398
Query: 315 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 374
++++D LC NGK+++A + D M + ++ + ++Y T+++G C G+V
Sbjct: 399 ------------SILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 375 NRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 434
+ +LF S+ +V +Y+ +I+G C + ++ A +L +M G PD YNTL
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Query: 435 FIGLFEIHQVERAFKLFDEMRRDGVAADTWT 465
+ +L EMR D T
Sbjct: 507 IRAHLRDGDKAASAELIREMRSCRFVGDAST 537
Score = 151 bits (382), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 94/298 (31%), Positives = 150/298 (50%), Gaps = 8/298 (2%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P + +FN L K + L + + PD++TYN LIN FC R+ +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 165 LGRIL-RSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLC 223
++ + CF PD T+N+LIKG C R+ + LF ++ G + +TY+TLI GL
Sbjct: 313 FEFMVSKDCF-PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 224 RTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 283
G A +F++M + GV P+ +TY+ ++DGLC G ++KA E+F M+
Sbjct: 372 HDGDCDNAQKVFKQMVSD----GV--PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 284 INPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 343
I ++ Y ++I G C A ++ L + +GV+PNVVT+N ++ LC + EA
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 344 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILIN 401
LL M + G P++ YNTL+ G + EL M S R + D + ++ N
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 543
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%)
Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFV 163
PP + +++IL L N + L +F + + + D+Y Y +I CK G+V G+
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 164 VLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLC 223
+ + P+ VT+N++I GLC++ + EA AL K+K G P+ TY+TLI
Sbjct: 452 LFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 224 RTGHTIVALNLFEEM 238
R G + L EM
Sbjct: 512 RDGDKAASAELIREM 526
Score = 38.9 bits (89), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 98 LNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 157
L+++ P V ++N + L + +L K++ G PD TYN LI + G
Sbjct: 456 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Query: 158 VSPGFVVLGRILRSC-FTPDAVTFNSLIKGLCAESRI 193
+ ++ R +RSC F DA T L+ + + R+
Sbjct: 516 KAASAELI-REMRSCRFVGDASTI-GLVANMLHDGRL 550
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 282 bits (722), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 149/435 (34%), Positives = 242/435 (55%), Gaps = 45/435 (10%)
Query: 71 RERFKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
RE+ +G ++ + ++A +F M+ RP P + F+ L +AK +D V+SL
Sbjct: 49 REKLSRNG---LSELKLDDAVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLG 104
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILR-------------------- 170
+++ + G+ + YTY+ILINCFC+ ++ VLG++++
Sbjct: 105 EQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS 164
Query: 171 ---------------SCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITY 215
+ + P+ VTFN+LI GL ++ EA AL ++ A GC+P+++TY
Sbjct: 165 KRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTY 224
Query: 216 STLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 275
++NGLC+ G T +A NL +M G EP + Y TIIDGLCK +D A L
Sbjct: 225 GVVVNGLCKRGDTDLAFNLLNKMEQGK------LEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 276 FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 335
F +M+ + I PNVVTY+SLI C W++A LL +M+++ + P+V TF+ ++D K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 336 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFS 395
GK+ EA +L D M++ + P+ Y++L++GFC+ R++ AK++F M S C DV +
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 396 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMR 455
Y+ LI G+CK K +E + ++ EM +G+ + V YN L GLF+ + A ++F EM
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 456 RDGVAADTWTYRTFI 470
DGV + TY T +
Sbjct: 459 SDGVPPNIMTYNTLL 473
Score = 231 bits (589), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 195/361 (54%), Gaps = 6/361 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V +N + L K KH D L+LFK + + G+ P++ TY+ LI+C C GR S +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
L ++ PD TF++LI E +++EA L+ ++ +P+++TYS+LING C
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
A +FE M + + C P+ VTY T+I G CK V++ E+F +M +
Sbjct: 374 HDRLDEAKQMFEFMVSKH------CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGL 427
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
N VTYN LI G A D + A+ + EM+ GV PN++T+N ++D LCKNGK+++A
Sbjct: 428 VGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMV 487
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
+ + + + + P + YN +++G C G+V +LF ++ DV +Y+ +I+G+C
Sbjct: 488 VFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTW 464
+ E A +L+ EM G P+ YNTL E + +L EMR G A D
Sbjct: 548 RKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAS 607
Query: 465 T 465
T
Sbjct: 608 T 608
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 209/418 (50%), Gaps = 42/418 (10%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M P V+ ++ G NK + ++L R+ + G PDL TY +
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEA-MALIDRMVAKGCQPDLVTYGV 226
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
++N CK G F +L ++ + P + +N++I GLC + +A LF +++ G
Sbjct: 227 VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 208 CEPNVITYSTLINGLC-----------------------------------RTGHTIVAL 232
PNV+TYS+LI+ LC + G + A
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 233 NLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 292
L++EM + +P+ VTY+++I+G C +D+AK++F M ++ P+VVTYN
Sbjct: 347 KLYDEMVKRS------IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYN 400
Query: 293 SLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 352
+LI GFC E + EM +G+ N VT+N+++ L + G D A + M+
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 353 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGA 412
GV PN YNTL+DG C G++ +A +F ++ ++ +++Y+I+I G CK ++E
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 413 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
L+ + KG+KPDVV YNT+ G E A LF EM+ DG ++ Y T I
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLI 578
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 143/287 (49%), Gaps = 8/287 (2%)
Query: 101 RPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSP 160
R P V +F+ L K L+ + + P + TY+ LIN FC R+
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 161 GFVVLGRIL-RSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLI 219
+ ++ + CF PD VT+N+LIKG C R+ E +F ++ G N +TY+ LI
Sbjct: 380 AKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 220 NGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKM 279
GL + G +A +F+EM + GV PN +TY T++DGLCK G ++KA +F +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSD----GV--PPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Query: 280 KDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKM 339
+ + P + TYN +I G C A + L + +GV+P+VV +N ++ C+ G
Sbjct: 493 QRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 340 DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 386
+EA L M + G PN+ YNTL+ G + EL M S
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 33/290 (11%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA ++D M+ R P + +++ L + D +F+ + S FPD+ TYN L
Sbjct: 344 EAEKLYDEMVK-RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
I FCK RV G V + + + VT+N LI+GL A +F ++ + G
Sbjct: 403 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGE---------IGVVCE--------- 250
PN++TY+TL++GLC+ G A+ +FE + E I +C+
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 251 -----------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC 299
P+ V Y T+I G C++G ++A LF +MK++ PN YN+LI
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 300 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 349
D + L+ EM G + T ++ + L +G++D++ LD++
Sbjct: 583 RDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS--FLDML 629
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 280 bits (717), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/435 (36%), Positives = 241/435 (55%), Gaps = 46/435 (10%)
Query: 71 RERFKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
RER +S + I ++A +F M++ RP P V F+ LF +AK K YD VL+L
Sbjct: 57 RERLRSG----LVDIKADDAIDLFRDMIHSRP-LPTVIDFSRLFSAIAKTKQYDLVLALC 111
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAE 190
K++ G+ +LYT +I+INCFC+ ++ F +G+I++ + P+ +TF++LI GLC E
Sbjct: 112 KQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLE 171
Query: 191 SRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCE 250
R+ EA L ++ G +P++IT +TL+NGLC +G A+ L ++M E G C+
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV----EYG--CQ 225
Query: 251 PNTVT-----------------------------------YTTIIDGLCKEGFVDKAKEL 275
PN VT Y+ IIDGLCK G +D A L
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNL 285
Query: 276 FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 335
F +M+ + I N++TYN LI GFC A W++ LL +M+ + + PNVVTF+V++D K
Sbjct: 286 FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVK 345
Query: 336 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFS 395
GK+ EA L MI G+ P+ Y +L+DGFC +++A ++ M S C ++ +
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 396 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMR 455
++ILINGYCK I+ L L+ +M +G+ D V YNTL G E+ ++ A +LF EM
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 456 RDGVAADTWTYRTFI 470
V + TY+ +
Sbjct: 466 SRKVPPNIVTYKILL 480
Score = 207 bits (526), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/382 (31%), Positives = 194/382 (50%), Gaps = 7/382 (1%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + D M+ P V+ + + + K+ + L +++ + D Y+I+
Sbjct: 211 EAMLLIDKMVEYGCQPNAVT-YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
I+ CK G + F + + T + +T+N LI G C R + A L +
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
PNV+T+S LI+ + G A L +EM + G+ P+T+TYT++IDG CKE
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR----GIA--PDTITYTSLIDGFCKENH 383
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
+DKA ++ M + +PN+ T+N LI+G+C AN ++ L +M +GV + VT+N
Sbjct: 384 LDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNT 443
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNR 388
++ C+ GK++ A L M+ V PN Y L+DG C G +A E+F +E ++
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 389 CMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 448
D+ Y+I+I+G C +++ A L+ + KG+KP V YN + GL + + A
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 449 KLFDEMRRDGVAADTWTYRTFI 470
LF +M DG A D WTY I
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILI 585
Score = 202 bits (514), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 185/362 (51%), Gaps = 6/362 (1%)
Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRI 168
++I+ L K+ D +LF + G+ ++ TYNILI FC GR G +L +
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 169 LRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHT 228
++ P+ VTF+ LI E ++ EA L ++ G P+ ITY++LI+G C+ H
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 229 IVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 288
A + + M + C+PN T+ +I+G CK +D ELF KM + +
Sbjct: 385 DKANQMVDLMVSKG------CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 289 VTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 348
VTYN+LI GFC N AK L EM+ + V PN+VT+ +++D LC NG+ ++A + +
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 349 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKE 408
+ + + + +YN ++ G C +V+ A +LF S+ V +Y+I+I G CK
Sbjct: 499 IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP 558
Query: 409 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRT 468
+ A L+ +M G PD YN L ++ KL +E++R G + D T +
Sbjct: 559 LSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKM 618
Query: 469 FI 470
I
Sbjct: 619 VI 620
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 18/290 (6%)
Query: 101 RPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSP 160
R P ++ L K H D + + S G P++ T+NILIN +CK R+
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421
Query: 161 GFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLIN 220
G + ++ D VT+N+LI+G C ++ A LF ++ + PN++TY L++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 221 GLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 280
GLC G + AL +FE++ E+ + Y II G+C VD A +LF +
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIG------IYNIIIHGMCNASKVDDAWDLFCSLP 535
Query: 281 DENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 340
+ + P V TYN +I G C +EA+ L +M + G P+ T+N+++ +G
Sbjct: 536 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDAT 595
Query: 341 EASRLLDLMIQIGVRPNA----FVYNTLMDGFCLTGRVNRAKELFVSMES 386
++ +L++ + + G +A V + L DG R K+ F+ M S
Sbjct: 596 KSVKLIEELKRCGFSVDASTIKMVIDMLSDG--------RLKKSFLDMLS 637
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 95/218 (43%), Gaps = 17/218 (7%)
Query: 65 SLEKFLRERFKSSGEGDITTITPNEAFC----------IFDYMLNMRPSPPPVSSFNILF 114
LE F + + +T T + FC +F M++ R PP + ++ IL
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS-RKVPPNIVTYKILL 480
Query: 115 GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFT 174
L N + L +F+++ + + D+ YNI+I+ C +V + + +
Sbjct: 481 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 540
Query: 175 PDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL 234
P T+N +I GLC + + EA LF K++ G P+ TY+ LI G ++ L
Sbjct: 541 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 600
Query: 235 FEEMANGNGEIGVVCEPNTVTYTT--IIDGLCKEGFVD 270
EE+ G + +T+ + DG K+ F+D
Sbjct: 601 IEELK----RCGFSVDASTIKMVIDMLSDGRLKKSFLD 634
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 279 bits (713), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/418 (35%), Positives = 231/418 (55%), Gaps = 42/418 (10%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A +F M+ RP P V F+ L +AK +D V+SL +++ + G+ +LYTY+I
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIM------------- 194
LINCFC+ ++S VL ++++ + PD VT NSL+ G C +RI
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 195 ----------------------EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVAL 232
EA AL ++ GC+P+++TY ++NGLC+ G +AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 233 NLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 292
+L ++M G EP V Y TIID LC V+ A LF +M ++ I PNVVTYN
Sbjct: 242 SLLKKMEQGK------IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 293 SLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 352
SLI C W++A LL +M+++ + PNVVTF+ ++D K GK+ EA +L D MI+
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 355
Query: 353 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGA 412
+ P+ F Y++L++GFC+ R++ AK +F M S C +V +Y+ LI G+CK K ++
Sbjct: 356 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEG 415
Query: 413 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ L+ EM +G+ + V Y TL G F+ + + A +F +M DGV D TY +
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 199/383 (51%), Gaps = 7/383 (1%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M+ ++ P + ++ I+ L K D LSL K++ + P + YN
Sbjct: 203 SEAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNT 261
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+I+ C V+ + + P+ VT+NSLI+ LC R +A+ L + +
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
PNV+T+S LI+ + G + A L++EM I +P+ TY+++I+G C
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEM------IKRSIDPDIFTYSSLINGFCMHD 375
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
+D+AK +F M ++ PNVVTYN+LI GFC A +E L EM +G+ N VT+
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
++ + + D A + M+ GV P+ Y+ L+DG C G+V A +F ++ +
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 447
+ D+++Y+I+I G CK ++E L+ + KG+KP+VV Y T+ G E A
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 448 FKLFDEMRRDGVAADTWTYRTFI 470
LF EM+ +G D+ TY T I
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLI 578
Score = 169 bits (427), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/334 (29%), Positives = 169/334 (50%), Gaps = 7/334 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N+A +F M N + P V ++N L CL + L + + P++ T++
Sbjct: 273 NDALNLFTEMDN-KGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F K G++ + +++ PD T++SLI G C R+ EA +F + +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
C PNV+TY+TLI G C+ + LF EM+ G +G NTVTYTT+I G +
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ-RGLVG-----NTVTYTTLIHGFFQAR 445
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
D A+ +F +M + + P+++TY+ L+ G C A + + ++P++ T+N
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
++++ +CK GK+++ L + GV+PN Y T+M GFC G A LF M+
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLS 421
+ D +Y+ LI + ++ + + L EM S
Sbjct: 566 GPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 147/279 (52%), Gaps = 6/279 (2%)
Query: 192 RIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEP 251
++ +A LF + P+++ +S L++ + + + ++L E+M N +G+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SH 114
Query: 252 NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLL 311
N TY+ +I+ C+ + A + KM P++VT NSL++GFC+ N ++A L+
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 312 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 371
+M++ G QP+ TFN ++ L ++ + EA L+D M+ G +P+ Y +++G C
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 372 GRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 431
G ++ A L ME + V Y+ +I+ C K + AL+L++EM +KGI+P+VV Y
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 432 NTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
N+L L + A +L +M + + T+ I
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALI 333
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 234/431 (54%), Gaps = 46/431 (10%)
Query: 71 RERFKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
+ER ++ I I N+A +F+ M+ RP P P+ FN L +A+ K YD VL
Sbjct: 39 KERLRNG----IVDIKVNDAIDLFESMIQSRPLPTPID-FNRLCSAVARTKQYDLVLGFC 93
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAE 190
K + G+ D+YT I+INC+C+ ++ F VLGR + + PD +TF++L+ G C E
Sbjct: 94 KGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLE 153
Query: 191 SRIMEAAALFTKLKAFGCEPNVITYSTLINGLC--------------------------- 223
R+ EA AL ++ P+++T STLINGLC
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 224 --------RTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 275
++G++ +AL+LF +M N + + V Y+ +ID LCK+G D A L
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERN------IKASVVQYSIVIDSLCKDGSFDDALSL 267
Query: 276 FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 335
F +M+ + I +VVTY+SLI G C W++ +L EM+ + + P+VVTF+ ++D K
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327
Query: 336 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFS 395
GK+ EA L + MI G+ P+ YN+L+DGFC ++ A ++F M S C D+ +
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387
Query: 396 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMR 455
YSILIN YCK K ++ + L+ E+ SKG+ P+ + YNTL +G + ++ A +LF EM
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 456 RDGVAADTWTY 466
GV TY
Sbjct: 448 SRGVPPSVVTY 458
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 206/418 (49%), Gaps = 42/418 (10%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M+ M+ P V+ ++ G K + L L R+ G PD TY
Sbjct: 157 SEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGR-VSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
++N CK G + + ++ V ++ +I LC + +A +LF +++ G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
+ +V+TYS+LI GLC G + EM IG P+ VT++ +ID KEG
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREM------IGRNIIPDVVTFSALIDVFVKEG 329
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
+ +AKEL+ +M I P+ +TYNSLI GFC N +EA + M+ +G +P++VT++
Sbjct: 330 KLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYS 389
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
++++ CK ++D+ RL + G+ PN YNTL+ GFC +G++N AKELF M S
Sbjct: 390 ILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEML--------------------------- 420
V +Y IL++G C N E+ AL ++ +M
Sbjct: 450 GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 421 --------SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
KG+KPDVV YN + GL + + A LF +M+ DG D +TY I
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Score = 187 bits (476), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 188/361 (52%), Gaps = 8/361 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A +F+ M M+ V +++ L G L + +D + + + + PD+ T++
Sbjct: 262 DDALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ F K G++ + ++ PD +T+NSLI G C E+ + EA +F + + G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
CEP+++TYS LIN C+ + LF E+++ G++ PNT+TY T++ G C+ G
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSK----GLI--PNTITYNTLVLGFCQSG 434
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
++ AKELF +M + P+VVTY L+ G C + N+A + +M + + +N
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
+I+ +C K+D+A L + GV+P+ YN ++ G C G ++ A LF M+ +
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED 554
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 447
C D F+Y+ILI + + ++ L EM G D + I + +++++
Sbjct: 555 GCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIK-MVIDMLSDRRLDKS 613
Query: 448 F 448
F
Sbjct: 614 F 614
Score = 139 bits (351), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 162/315 (51%), Gaps = 8/315 (2%)
Query: 157 RVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTK-LKAFGCEPNVITY 215
+V+ + +++S P + FN L + A ++ + F K ++ G E ++ T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAV-ARTKQYDLVLGFCKGMELNGIEHDMYTM 108
Query: 216 STLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKEL 275
+ +IN CR + A ++ ++G EP+T+T++T+++G C EG V +A L
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAW----KLGY--EPDTITFSTLVNGFCLEGRVSEAVAL 162
Query: 276 FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 335
+M + P++VT ++LI+G C +EA L+ M++ G QP+ VT+ +++ LCK
Sbjct: 163 VDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222
Query: 336 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFS 395
+G A L M + ++ + Y+ ++D C G + A LF ME DV +
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 396 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMR 455
YS LI G C + + + + EM+ + I PDVV ++ L + ++ A +L++EM
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 456 RDGVAADTWTYRTFI 470
G+A DT TY + I
Sbjct: 343 TRGIAPDTITYNSLI 357
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 276 bits (705), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 236/443 (53%), Gaps = 51/443 (11%)
Query: 72 ERFKSSGEGDITTITPN---------EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKH 122
ER +S GD I N +A +F M+ RP P V FN L +AK
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE-FNKLLSAVAKMNK 98
Query: 123 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNS 182
++ V+SL +++ + G+ DLYTY+I INCFC+ ++S VL ++++ + PD VT +S
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 183 LIKGLCAESRI-----------------------------------MEAAALFTKLKAFG 207
L+ G C RI EA AL ++ G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
C+P+++TY T++NGLC+ G +AL+L ++M G E + V Y TIIDGLCK
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGK------IEADVVIYNTIIDGLCKYK 272
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
+D A LF +M ++ I P+V TY+SLI C W++A LL +M+++ + PNVVTF+
Sbjct: 273 HMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
++D K GK+ EA +L D MI+ + P+ F Y++L++GFC+ R++ AK +F M S
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 447
C +V +YS LI G+CK K +E + L+ EM +G+ + V Y TL G F+ + A
Sbjct: 393 DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 452
Query: 448 FKLFDEMRRDGVAADTWTYRTFI 470
+F +M GV + TY +
Sbjct: 453 QMVFKQMVSVGVHPNILTYNILL 475
Score = 234 bits (598), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 123/356 (34%), Positives = 198/356 (55%), Gaps = 6/356 (1%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 169
+N + L K KH D L+LF +++ G+ PD++TY+ LI+C C GR S +L ++
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 170 RSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI 229
P+ VTF++LI E +++EA L+ ++ +P++ TYS+LING C
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 230 VALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 289
A ++FE M + + C PN VTY+T+I G CK V++ ELF +M + N V
Sbjct: 381 EAKHMFELMISKD------CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 290 TYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 349
TY +LIHGF A D + A+ + +M+ GV PN++T+N+++D LCKNGK+ +A + + +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 350 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEI 409
+ + P+ + YN +++G C G+V ELF ++ +V +Y+ +I+G+C+
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 410 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWT 465
E A SL +M G P+ YNTL E + +L EMR G A D T
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 193/383 (50%), Gaps = 7/383 (1%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M+ R P + ++ + L K D LSL K++ + D+ YN
Sbjct: 205 SEAVALVDQMVQ-RGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNT 263
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+I+ CK + + + PD T++SLI LC R +A+ L + +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
PNV+T+S LI+ + G + A L++EM I +P+ TY+++I+G C
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEM------IKRSIDPDIFTYSSLINGFCMHD 377
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
+D+AK +F M ++ PNVVTY++LI GFC A E L EM +G+ N VT+
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
++ + D A + M+ +GV PN YN L+DG C G++ +A +F ++ +
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 447
D+++Y+I+I G CK ++E L+ + KG+ P+V+ YNT+ G E A
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEA 557
Query: 448 FKLFDEMRRDGVAADTWTYRTFI 470
L +M+ DG ++ TY T I
Sbjct: 558 DSLLKKMKEDGPLPNSGTYNTLI 580
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 166/354 (46%), Gaps = 24/354 (6%)
Query: 8 RPFHFTSISVSALRCNFSSSFPHTGKPTSSILENEPSYPN--TTAKLKESLRLTVKDRAS 65
RP FT S+ + CN+ + + S ++E + + PN T + L ++ K
Sbjct: 290 RPDVFTYSSLISCLCNYGR-WSDASRLLSDMIERKIN-PNVVTFSALIDAFVKEGK-LVE 346
Query: 66 LEKFLRERFKSSGEGDITTITP-NEAFCIFD------YMLNMRPSP---PPVSSFNILFG 115
EK E K S + DI T + FC+ D +M + S P V +++ L
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 116 CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTP 175
K K + + LF+ ++ GL + TY LI+ F + +V +++ P
Sbjct: 407 GFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP 466
Query: 176 DAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF 235
+ +T+N L+ GLC ++ +A +F L+ EP++ TY+ +I G+C+ G LF
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 236 EEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI 295
++ GV PN + Y T+I G C++G ++A L KMK++ PN TYN+LI
Sbjct: 527 CNLSLK----GV--SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 296 HGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 349
D + L+ EM G + T ++ + L +G++D++ LD++
Sbjct: 581 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS--FLDML 631
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 275 bits (704), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 236/443 (53%), Gaps = 51/443 (11%)
Query: 72 ERFKSSGEGDITTITPN---------EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKH 122
ER +S GD I N +A +F M+ RP P V FN L +AK
Sbjct: 40 ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVE-FNKLLSAVAKMNK 98
Query: 123 YDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNS 182
++ V+SL +++ + G+ DLYTY+I INCFC+ ++S VL ++++ + PD VT +S
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSS 158
Query: 183 LIKGLCAESRIM-----------------------------------EAAALFTKLKAFG 207
L+ G C RI EA AL ++ G
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
C+P+++TY T++NGLC+ G +ALNL +M + N V + TIID LCK
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------IKANVVIFNTIIDSLCKYR 272
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
V+ A +LF +M+ + I PNVVTYNSLI+ C W++A LL M+++ + PNVVTFN
Sbjct: 273 HVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFN 332
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
++D K GK+ EA +L + MIQ + P+ YN L++GFC+ R++ AK++F M S
Sbjct: 333 ALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSK 392
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 447
C+ ++ +Y+ LING+CK K +E + L+ EM +G+ + V Y T+ G F+ + A
Sbjct: 393 DCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSA 452
Query: 448 FKLFDEMRRDGVAADTWTYRTFI 470
+F +M + V D TY +
Sbjct: 453 QMVFKQMVSNRVPTDIMTYSILL 475
Score = 170 bits (431), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 169/353 (47%), Gaps = 44/353 (12%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR------------ 157
FN + L K +H + + LF + + G+ P++ TYN LINC C GR
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 158 ---VSPGFVVLGRILRSCFT--------------------PDAVTFNSLIKGLCAESRIM 194
++P V ++ + F PD +T+N LI G C +R+
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 195 EAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTV 254
EA +F + + C PN+ TY+TLING C+ + LF EM+ G +G NTV
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQ-RGLVG-----NTV 434
Query: 255 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEM 314
TYTTII G + G D A+ +F +M + +++TY+ L+HG C + A + +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL 494
Query: 315 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 374
++ N+ +N +++ +CK GK+ EA DL + ++P+ YNT++ G C +
Sbjct: 495 QKSEMELNIFIYNTMIEGMCKAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLL 551
Query: 375 NRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 427
A +LF M+ + + + +Y+ LI ++ + + L EM S G D
Sbjct: 552 QEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 131/255 (51%), Gaps = 11/255 (4%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA +F +M++ + P + ++N L K K + + LF+ ++ GL + TY
Sbjct: 380 DEAKQMFKFMVS-KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTT 438
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+I F + G +V +++ + D +T++ L+ GLC+ ++ A +F L+
Sbjct: 439 IIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
E N+ Y+T+I G+C+ G A +LF ++ +P+ VTY T+I GLC +
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---------IKPDVVTYNTMISGLCSKR 549
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
+ +A +LF KMK++ PN TYN+LI D + L+ EM G + T +
Sbjct: 550 LLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS 609
Query: 328 VIMDELCKNGKMDEA 342
++ + L +G++D++
Sbjct: 610 LVTNML-HDGRLDKS 623
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 14/192 (7%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+ A +F M++ R P + +++IL L DT L +FK L + + +++ YN
Sbjct: 450 DSAQMVFKQMVSNRV-PTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+I CK G+V + + + PD VT+N++I GLC++ + EA LF K+K G
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
PN TY+TLI R + L +EM + G V + +T++ T + +G
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSS----GFVGDASTISLVT---NMLHDG 618
Query: 268 FVDKAKELFLKM 279
+DK+ FL M
Sbjct: 619 RLDKS---FLNM 627
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 270 bits (691), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/429 (34%), Positives = 234/429 (54%), Gaps = 34/429 (7%)
Query: 71 RERFKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
RER +S I I ++A +F M RP P + F+ LF +A+ K YD VL L
Sbjct: 41 RERLRSG----IVDIKEDDAVDLFQEMTRSRPRPRLID-FSRLFSVVARTKQYDLVLDLC 95
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAE 190
K++ G+ +LYT +I+INC C+ ++S F +G+I++ + PD VTF++LI GLC E
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 191 SRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGE------ 244
R+ EA L ++ G +P +IT + L+NGLC G A+ L + M +
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 245 ---IGVVCEP--------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKD 281
+ V+C+ + V Y+ IIDGLCK+G +D A LF +M+
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 282 ENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 341
+ +++ Y +LI GFCYA W++ LL +M+ + + P+VV F+ ++D K GK+ E
Sbjct: 276 KGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLRE 335
Query: 342 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILIN 401
A L MIQ G+ P+ Y +L+DGFC ++++A + M S C ++ +++ILIN
Sbjct: 336 AEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 402 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAA 461
GYCK I+ L L+ +M +G+ D V YNTL G E+ ++E A +LF EM V
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRP 455
Query: 462 DTWTYRTFI 470
D +Y+ +
Sbjct: 456 DIVSYKILL 464
Score = 197 bits (501), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 198/412 (48%), Gaps = 30/412 (7%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M+ M P ++ ++ G K D VL L R+ TG P+ TY
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL-LIDRMVETGFQPNEVTYGP 217
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
++ CK G+ + +L ++ DAV ++ +I GLC + + A LF +++ G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC------------------ 249
+ ++I Y+TLI G C G L +M VV
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 250 -----------EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 298
P+TVTYT++IDG CKE +DKA + M + PN+ T+N LI+G+
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 299 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 358
C AN ++ L +M +GV + VT+N ++ C+ GK++ A L M+ VRP+
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 359 FVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSE 418
Y L+DG C G +A E+F +E ++ D+ Y+I+I+G C +++ A L+
Sbjct: 458 VSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 517
Query: 419 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ KG+KPDV YN + GL + + A LF +M DG + + TY I
Sbjct: 518 LPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Score = 192 bits (487), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 182/361 (50%), Gaps = 6/361 (1%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 169
++I+ L K+ D +LF + G D+ Y LI FC GR G +L ++
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 170 RSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI 229
+ TPD V F++LI E ++ EA L ++ G P+ +TY++LI+G C+
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 230 VALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 289
A ++ + M + C PN T+ +I+G CK +D ELF KM + + V
Sbjct: 370 KANHMLDLMVSKG------CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV 423
Query: 290 TYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 349
TYN+LI GFC AK L EM+ + V+P++V++ +++D LC NG+ ++A + + +
Sbjct: 424 TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Query: 350 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEI 409
+ + + +YN ++ G C +V+ A +LF S+ DV +Y+I+I G CK +
Sbjct: 484 EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSL 543
Query: 410 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTF 469
A L+ +M G P+ YN L ++ KL +E++R G + D T +
Sbjct: 544 SEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMV 603
Query: 470 I 470
+
Sbjct: 604 V 604
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 145/302 (48%), Gaps = 19/302 (6%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + M+ SP V+ +++ G K D + + S G P++ T+NIL
Sbjct: 335 EAEELHKEMIQRGISPDTVTYTSLIDG-FCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
IN +CK + G + ++ D VT+N+LI+G C ++ A LF ++ +
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
P++++Y L++GLC G AL +FE++ E+ + Y II G+C
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIG------IYNIIIHGMCNASK 507
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
VD A +LF + + + P+V TYN +I G C +EA L +M + G PN T+N+
Sbjct: 508 VDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNI 567
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNA----FVYNTLMDGFCLTGRVNRAKELFVSM 384
++ G ++++L++ + + G +A V + L DG R K+ F+ M
Sbjct: 568 LIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDG--------RLKKSFLDM 619
Query: 385 ES 386
S
Sbjct: 620 LS 621
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 17/218 (7%)
Query: 65 SLEKFLRERFKSSGEGDITTITPNEAFC----------IFDYMLNMRPSPPPVSSFNILF 114
LE F + + +T T + FC +F M++ R P VS + IL
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS-YKILL 464
Query: 115 GCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFT 174
L N + L +F+++ + + D+ YNI+I+ C +V + + +
Sbjct: 465 DGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 524
Query: 175 PDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL 234
PD T+N +I GLC + + EA LF K++ G PN TY+ LI G + L
Sbjct: 525 PDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL 584
Query: 235 FEEMANGNGEIGVVCEPNTVTYTT--IIDGLCKEGFVD 270
EE+ G + +TV + DG K+ F+D
Sbjct: 585 IEEIKR----CGFSVDASTVKMVVDMLSDGRLKKSFLD 618
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 263 bits (673), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 141/424 (33%), Positives = 230/424 (54%), Gaps = 42/424 (9%)
Query: 82 ITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPD 141
++ I ++A +F M RP P + F+ L +AK +D V+S +++ G+ +
Sbjct: 54 LSDIELDDAIGLFGVMAQSRPFPSIIE-FSKLLSAIAKMNKFDLVISFGEKMEILGISHN 112
Query: 142 LYTYNILINCFC----------------KMG-------------------RVSPGFVVLG 166
LYTYNILINCFC K+G R+S ++
Sbjct: 113 LYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVD 172
Query: 167 RILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTG 226
+++ + PD VTF +LI GL ++ EA AL ++ GC+P+++TY ++NGLC+ G
Sbjct: 173 QMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRG 232
Query: 227 HTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 286
T +ALNL +M E N V Y+T+ID LCK D A LF +M+++ + P
Sbjct: 233 DTDLALNLLNKMEAAK------IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 287 NVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 346
NV+TY+SLI C W++A LL +M+++ + PN+VTF+ ++D K GK+ +A +L
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 347 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKN 406
+ MI+ + PN F Y++L++GFC+ R+ AK++ M C+ +V +Y+ LING+CK
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 407 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTY 466
K ++ + L+ EM +G+ + V Y TL G F+ + A +F +M GV + TY
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 466
Query: 467 RTFI 470
+
Sbjct: 467 NILL 470
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 154/274 (56%), Gaps = 6/274 (2%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 169
++ + L K +H D L+LF + + G+ P++ TY+ LI+C C GR S +L ++
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 170 RSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI 229
P+ VTF++LI + ++++A L+ ++ +PN+ TYS+LING C
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 230 VALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 289
A + E M + C PN VTY T+I+G CK VDK ELF +M + N V
Sbjct: 376 EAKQMLELMIRKD------CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 290 TYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 349
TY +LIHGF A D + A+ + +M+ GV PN++T+N+++D LCKNGK+ +A + + +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 350 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 383
+ + P+ + YN +++G C G+ FV+
Sbjct: 490 QRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYFVA 523
Score = 166 bits (420), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 170/353 (48%), Gaps = 42/353 (11%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A + D M+ M P V+ ++ G NK + V +L R+ G PDL TY
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV-ALIDRMVQRGCQPDLVTYGA 223
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
++N CK G +L ++ + + V ++++I LC +A LFT+++ G
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 208 CEPNVITYSTLINGLC-----------------------------------RTGHTIVAL 232
PNVITYS+LI+ LC + G + A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 233 NLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 292
L+EEM I +PN TY+++I+G C + +AK++ M ++ PNVVTYN
Sbjct: 344 KLYEEM------IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYN 397
Query: 293 SLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 352
+LI+GFC A ++ L EM +G+ N VT+ ++ + D A + M+ +
Sbjct: 398 TLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV 457
Query: 353 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCK 405
GV PN YN L+DG C G++ +A +F ++ + D+++Y+I+I G CK
Sbjct: 458 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 510
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPG 161
P + ++NIL L KN + +F+ L + + PD+YTYNI+I CK G+ G
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 257 bits (656), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/401 (34%), Positives = 223/401 (55%), Gaps = 10/401 (2%)
Query: 70 LRERFKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSL 129
LRER + DI N+A +F M+ RP P V FN L + K K YD V+SL
Sbjct: 52 LRERLSKTRLRDIKL---NDAIDLFSDMVKSRPFPSIVD-FNRLLSAIVKLKKYDVVISL 107
Query: 130 FKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCA 189
K++ G+ DLYT+NI+INCFC +VS +LG++L+ + PD VT SL+ G C
Sbjct: 108 GKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCR 167
Query: 190 ESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC 249
+R+ +A +L K+ G +P+++ Y+ +I+ LC+T A + F+E+
Sbjct: 168 RNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG------I 221
Query: 250 EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 309
PN VTYT +++GLC A L M + I PNV+TY++L+ F EAK
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 310 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 369
L EM+ + P++VT++ +++ LC + ++DEA+++ DLM+ G + YNTL++GFC
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFC 341
Query: 370 LTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 429
RV +LF M + + +Y+ LI G+ + +++ A +S+M GI PD+
Sbjct: 342 KAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIW 401
Query: 430 IYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
YN L GL + ++E+A +F++M++ + D TY T I
Sbjct: 402 TYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 442
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 137/269 (50%), Gaps = 15/269 (5%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA +F+ M+ M P V+ +++ G L + D +F + S G D+ +YN L
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLING-LCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
IN FCK RV G + + + + VT+N+LI+G + +A F+++ FG
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
P++ TY+ L+ GLC G AL +FE+M ++ +V TYTT+I G+CK G
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV------TYTTVIRGMCKTGK 450
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
V++A LF + + + P++VTY +++ G C +E + L +M +G+ N T +
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS- 509
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPN 357
+G + ++ L+ M+ G P+
Sbjct: 510 -------DGDITLSAELIKKMLSCGYAPS 531
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 251 bits (641), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 141/419 (33%), Positives = 223/419 (53%), Gaps = 43/419 (10%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A +F M+ RP P V F+ L +AK +D V+SL +++ + G+ +LYTY+I
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAF- 206
IN FC+ ++S +LG++++ + P VT NSL+ G C +RI EA AL ++
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 207 ----------------------------------GCEPNVITYSTLINGLCRTGHTIVAL 232
GC+P+++TY +INGLC+ G +AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 233 NLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 292
NL +M G E + V Y TIIDGLCK +D A +LF KM+ + I P+V TYN
Sbjct: 236 NLLNKMEKGK------IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYN 289
Query: 293 SLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 352
LI C W++A LL +M+++ + P++V FN ++D K GK+ EA +L D M++
Sbjct: 290 PLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKS 349
Query: 353 G-VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEG 411
P+ YNTL+ GFC RV E+F M + + +Y+ LI+G+ + ++ +
Sbjct: 350 KHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 409
Query: 412 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
A ++ +M+S G+ PD++ YN L GL VE A +F+ M++ + D TY T I
Sbjct: 410 AQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Score = 201 bits (511), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/384 (32%), Positives = 190/384 (49%), Gaps = 8/384 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M+ M P V+ ++ G NK + V +L +R+ G PDL TY
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV-ALVERMVVKGCQPDLVTYGA 220
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+IN CK G +L ++ + D V +N++I GLC + +A LF K++ G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
+P+V TY+ LI+ LC G A L +M N P+ V + +ID KEG
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN------INPDLVFFNALIDAFVKEG 334
Query: 268 FVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 326
+ +A++L+ +M K ++ P+VV YN+LI GFC E + EM +G+ N VT+
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394
Query: 327 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 386
++ + D A + M+ GV P+ YN L+DG C G V A +F M+
Sbjct: 395 TTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQK 454
Query: 387 NRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 446
D+ +Y+ +I CK ++E L+ + KG+KP+VV Y T+ G E
Sbjct: 455 RDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 514
Query: 447 AFKLFDEMRRDGVAADTWTYRTFI 470
A LF EM+ DG ++ TY T I
Sbjct: 515 ADALFVEMKEDGPLPNSGTYNTLI 538
Score = 158 bits (400), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 154/323 (47%), Gaps = 32/323 (9%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 169
+N + L K KH D LF ++ + G+ PD++TYN LI+C C GR S +L +L
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 170 RSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHT 228
PD V FN+LI E +++EA L+ ++ K+ C P+V+ Y+TLI G C+
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 229 IVALNLFEEMANGNGEIGVV---------------CE---------------PNTVTYTT 258
+ +F EM+ G +G C+ P+ +TY
Sbjct: 373 EEGMEVFREMSQ-RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQG 318
++DGLC G V+ A +F M+ ++ ++VTY ++I C A + L + +G
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 319 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 378
V+PNVVT+ +M C+ G +EA L M + G PN+ YNTL+ G +
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 379 ELFVSMESNRCMHDVFSYSILIN 401
EL M S D ++ ++ N
Sbjct: 552 ELIKEMRSCGFAGDASTFGLVTN 574
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 149/289 (51%), Gaps = 6/289 (2%)
Query: 182 SLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANG 241
+L + + + ++ +A LF + P+++ +S L++ + + + ++L E+M N
Sbjct: 45 NLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN- 103
Query: 242 NGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA 301
+G+ N TY+ I+ C+ + A + KM P++VT NSL++GFC+
Sbjct: 104 ---LGI--SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHG 158
Query: 302 NDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVY 361
N +EA L+ +M++ G QP+ VTF ++ L ++ K EA L++ M+ G +P+ Y
Sbjct: 159 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Query: 362 NTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLS 421
+++G C G + A L ME + DV Y+ +I+G CK K ++ A L+++M +
Sbjct: 219 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMET 278
Query: 422 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
KGIKPDV YN L L + A +L +M + D + I
Sbjct: 279 KGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALI 327
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 249 bits (635), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 138/421 (32%), Positives = 214/421 (50%), Gaps = 35/421 (8%)
Query: 79 EGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGL 138
EGD ++A+ + ML+ R P V ++N + L K + D + + + G+
Sbjct: 209 EGD-----SDKAYSTYHEMLD-RGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 139 FPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAA 198
PD TYN +++ +C G+ L ++ PD VT++ L+ LC R MEA
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 199 LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMA-NG---------------- 241
+F + G +P + TY TL+ G G + L + M NG
Sbjct: 323 IFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 242 -NGEIGVV-----------CEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 289
G++ PN VTY +I LCK G V+ A F +M DE ++P +
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 290 TYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 349
YNSLIHG C N W A+ L++EM+D+G+ N + FN I+D CK G++ E+ +L +LM
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 350 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEI 409
++IGV+PN YNTL++G+CL G+++ A +L M S + +YS LINGYCK +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 410 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTF 469
E AL L+ EM S G+ PD++ YN + GLF+ + A +L+ + G + TY
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622
Query: 470 I 470
+
Sbjct: 623 L 623
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/421 (32%), Positives = 210/421 (49%), Gaps = 44/421 (10%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTG---LFPDLYTY 145
+A +FD +L R + N +A++ V S + R+ G + PDL TY
Sbjct: 33 DARHVFDELLR-RGRGASIYGLNRALADVARDSPAAAV-SRYNRMARAGADEVTPDLCTY 90
Query: 146 NILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAAL-FTKLK 204
ILI C C+ GR+ GF LG +++ F DA+ F L+KGLCA+ R +A + ++
Sbjct: 91 GILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMT 150
Query: 205 AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLC 264
GC PNV +Y+ L+ GLC + AL L MA+ G P+ V+YTT+I+G
Sbjct: 151 ELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGG---GSPPDVVSYTTVINGFF 207
Query: 265 KEGFVDKAKELFLKMKDENINPNVVTYNSLI----------------------------- 295
KEG DKA + +M D I P+VVTYNS+I
Sbjct: 208 KEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 267
Query: 296 ------HGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 349
HG+C + EA L +M GV+P+VVT++++MD LCKNG+ EA ++ D M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 350 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEI 409
+ G++P Y TL+ G+ G + L M N D + +SILI Y K ++
Sbjct: 328 TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKV 387
Query: 410 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTF 469
+ A+ ++S+M +G+ P+ V Y + L + +VE A F++M +G++ Y +
Sbjct: 388 DQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSL 447
Query: 470 I 470
I
Sbjct: 448 I 448
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 199/379 (52%), Gaps = 7/379 (1%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA IFD M R P ++++ L A + L + G+ PD Y ++IL
Sbjct: 319 EARKIFDSMTK-RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
I + K G+V +V ++ + P+AVT+ ++I LC R+ +A F ++ G
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
P I Y++LI+GLC A L EM + +C NT+ + +IID CKEG
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG-----IC-LNTIFFNSIIDSHCKEGR 491
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
V ++++LF M + PNV+TYN+LI+G+C A +EA LL M+ G++PN VT++
Sbjct: 492 VIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNR 388
+++ CK +M++A L M GV P+ YN ++ G T R AKEL+V + +
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 389 CMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 448
++ +Y+I+++G CKNK + AL ++ + +K + +N + L ++ + + A
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 671
Query: 449 KLFDEMRRDGVAADTWTYR 467
LF +G+ + WTYR
Sbjct: 672 DLFVAFSSNGLVPNYWTYR 690
Score = 173 bits (438), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 180/387 (46%), Gaps = 44/387 (11%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P F+IL AK D + +F ++ GL P+ TY +I CK GRV +
Sbjct: 369 PDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLY 428
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCA----------------------------------- 189
+++ +P + +NSLI GLC
Sbjct: 429 FEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCK 488
Query: 190 ESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC 249
E R++E+ LF + G +PNVITY+TLING C G A+ L +G + V
Sbjct: 489 EGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLL------SGMVSVGL 542
Query: 250 EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 309
+PNTVTY+T+I+G CK ++ A LF +M+ ++P+++TYN ++ G AK
Sbjct: 543 KPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKE 602
Query: 310 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 369
L + + + G Q + T+N+I+ LCKN D+A ++ + + ++ A +N ++D
Sbjct: 603 LYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALL 662
Query: 370 LTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 429
GR + AK+LFV+ SN + + ++Y ++ +E L+ M G D
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 722
Query: 430 IYNTLFIGLFEIHQVERA---FKLFDE 453
+ N + L + ++ RA + DE
Sbjct: 723 MLNFIVRELLQRGEITRAGTYLSMIDE 749
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 125/262 (47%), Gaps = 9/262 (3%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFG-CLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
E+ +F+ M+ + P ++ ++ G CLA D + L + S GL P+ TY+
Sbjct: 494 ESEKLFELMVRIGVKPNVITYNTLINGYCLAGK--MDEAMKLLSGMVSVGLKPNTVTYST 551
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
LIN +CK+ R+ V+ + S +PD +T+N +++GL R A L+ ++ G
Sbjct: 552 LINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESG 611
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
+ + TY+ +++GLC+ T AL +F+ + + ++ T+ +ID L K G
Sbjct: 612 TQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL------EARTFNIMIDALLKVG 665
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
D+AK+LF+ + PN TY + E L + M D G + N
Sbjct: 666 RNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLN 725
Query: 328 VIMDELCKNGKMDEASRLLDLM 349
I+ EL + G++ A L ++
Sbjct: 726 FIVRELLQRGEITRAGTYLSMI 747
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 247 bits (630), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/417 (33%), Positives = 226/417 (54%), Gaps = 33/417 (7%)
Query: 83 TTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDL 142
+++ E +F M+ RP P V F+ + +AK+K+YD V+SLF + G+ DL
Sbjct: 46 SSMNLEEEIDLFCKMIQSRPLPSIVD-FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDL 104
Query: 143 YTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTK 202
Y+YNI+INC C+ R V+G++++ + PD VT +SLI G C +R+ +A L +K
Sbjct: 105 YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK 164
Query: 203 LKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEI----------GVVCE-- 250
++ G P+V+ Y+T+I+G C+ G A+ LF+ M G+ C
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 251 -----------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS 293
PN +T+T +ID KEG +A +L+ +M ++P+V TYNS
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 294 LIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIG 353
LI+G C +EAK +L M+ +G P+VVT+N +++ CK+ ++DE ++L M Q G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 354 VRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGAL 413
+ + YNT++ G+ GR + A+E+F M+S ++ +YSIL+ G C N +E AL
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL 401
Query: 414 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
L+ M I+ D+ YN + G+ +I VE A+ LF + G+ D +Y T I
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 145/429 (33%), Positives = 226/429 (52%), Gaps = 33/429 (7%)
Query: 71 RERFKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
RE+ ++ G + +I +AF +F M++ +P P V F L A + Y+TV+
Sbjct: 39 REKLRT---GFLHSIRFEDAFALFFEMVHSQPLPSIVD-FTRLLTATANLRRYETVIYFS 94
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAE 190
+++ G+ DLY++ ILI+CFC+ R+S VLG++++ + P VTF SL+ G C
Sbjct: 95 QKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLV 154
Query: 191 SRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC- 249
+RI +A +L + G EPNV+ Y+TLI+GLC+ G +AL L EM VV
Sbjct: 155 NRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTY 214
Query: 250 ----------------------------EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKD 281
P+ VT+T +ID K+G +D+A+EL+ +M
Sbjct: 215 NTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 282 ENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 341
+++PN VTYNS+I+G C +AK M +G PNVVT+N ++ CK +DE
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 342 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILIN 401
+L M G + F YNTL+ G+C G++ A ++F M S R D+ ++ IL++
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 402 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAA 461
G C N EIE AL + +M +V YN + GL + +VE+A++LF + +GV
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKP 454
Query: 462 DTWTYRTFI 470
D TY I
Sbjct: 455 DARTYTIMI 463
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 203/364 (55%), Gaps = 7/364 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P +FN L L K H + + + G PD+YTYN +I+ CK+G V V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
L +++ +P+ VT+N+LI LC E+++ EA L L + G P+V T+++LI GLC
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
T + VA+ LFEEM + CEP+ TY +ID LC +G +D+A + +M+
Sbjct: 413 TRNHRVAMELFEEMRSKG------CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
+V+TYN+LI GFC AN EA+ + EM GV N VT+N ++D LCK+ ++++A++
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
L+D MI G +P+ + YN+L+ FC G + +A ++ +M SN C D+ +Y LI+G C
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM-RRDGVAADT 463
K +E A L + KGI YN + GLF + A LF EM ++ D
Sbjct: 587 KAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDA 646
Query: 464 WTYR 467
+YR
Sbjct: 647 VSYR 650
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 198/402 (49%), Gaps = 42/402 (10%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTY------------------- 145
P VS+FN+L L + + + + + S GL PD T+
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 146 ----------------NILINCFCKMGRVSPGFVVLGRIL-RSCFTPDAVTFNSLIKGLC 188
N++++ FCK GRV + + + F PD TFN+L+ GLC
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 189 AESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVV 248
+ A + + G +P+V TY+++I+GLC+ G A+ + ++M +
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------ 360
Query: 249 CEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 308
C PNTVTY T+I LCKE V++A EL + + I P+V T+NSLI G C + A
Sbjct: 361 CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAM 420
Query: 309 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 368
L EM +G +P+ T+N+++D LC GK+DEA +L M G + YNTL+DGF
Sbjct: 421 ELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGF 480
Query: 369 CLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 428
C + A+E+F ME + + +Y+ LI+G CK++ +E A L +M+ +G KPD
Sbjct: 481 CKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 429 VIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
YN+L +++A + M +G D TY T I
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLI 582
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/383 (30%), Positives = 202/383 (52%), Gaps = 5/383 (1%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+E + D+M++ P +N + L V +++ G+ PD+ T+N+
Sbjct: 135 DEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNV 194
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
LI C+ ++ P ++L + PD TF ++++G E + A + ++ FG
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
C + ++ + +++G C+ G ALN +EM+N +G P+ T+ T+++GLCK G
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCKAG 309
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
V A E+ M E +P+V TYNS+I G C + EA +L +M+ + PN VT+N
Sbjct: 310 HVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYN 369
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
++ LCK +++EA+ L ++ G+ P+ +N+L+ G CLT A ELF M S
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 447
C D F+Y++LI+ C +++ AL++ +M G V+ YNTL G + ++ A
Sbjct: 430 GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREA 489
Query: 448 FKLFDEMRRDGVAADTWTYRTFI 470
++FDEM GV+ ++ TY T I
Sbjct: 490 EEIFDEMEVHGVSRNSVTYNTLI 512
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 209/441 (47%), Gaps = 26/441 (5%)
Query: 30 HTGKPTSSILENEPSYPNTTAKLKESLRLTVKDRASLEKFLRERFKSSGEGDITTITPNE 89
H +P +LE+ PSY V D + ++ + EGD+ +
Sbjct: 203 HQLRPAILMLEDMPSYG------------LVPDEKTFTTVMQGYIE---EGDL-----DG 242
Query: 90 AFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 149
A I + M+ S VS I+ G + + D + + + N G FPD YT+N L+
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302
Query: 150 NCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCE 209
N CK G V ++ +L+ + PD T+NS+I GLC + EA + ++ C
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFV 269
PN +TY+TLI+ LC+ A L + + G++ P+ T+ ++I GLC
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSK----GIL--PDVCTFNSLIQGLCLTRNH 416
Query: 270 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 329
A ELF +M+ + P+ TYN LI C +EA +L +M G +V+T+N +
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 330 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRC 389
+D CK K EA + D M GV N+ YNTL+DG C + RV A +L M
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 390 MHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 449
D ++Y+ L+ +C+ +I+ A + M S G +PD+V Y TL GL + +VE A K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 450 LFDEMRRDGVAADTWTYRTFI 470
L ++ G+ Y I
Sbjct: 597 LLRSIQMKGINLTPHAYNPVI 617
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+A + D M+ M P ++N L + + + + S G PD+ TY L
Sbjct: 523 DAAQLMDQMI-MEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581
Query: 149 INCFCKMGRVSPGFVVLGRILRSC------FTPDAVTFNSLIKGLCAESRIMEAAALFTK 202
I+ CK GRV V ++LRS TP A +N +I+GL + + EA LF +
Sbjct: 582 ISGLCKAGRVE----VASKLLRSIQMKGINLTPHA--YNPVIQGLFRKRKTTEAINLFRE 635
Query: 203 -LKAFGCEPNVITYSTLINGLCRTGHTI 229
L+ P+ ++Y + GLC G I
Sbjct: 636 MLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Score = 40.4 bits (93), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 36/151 (23%)
Query: 356 PNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSL 415
P +Y ++ +G + K++ M+S+RC ++ ILI Y + + + LS+
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 416 YSEMLSK------------------------------------GIKPDVVIYNTLFIGLF 439
M+ + GIKPDV +N L L
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 440 EIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
HQ+ A + ++M G+ D T+ T +
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 217/386 (56%), Gaps = 10/386 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
NEA +F +M+ RP P + F L +AK K +D V++L L G+ DLYT N+
Sbjct: 54 NEALDLFTHMVESRPLPSIID-FTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
L+NCFC+ + LG++++ F PD VTF SLI G C +R+ EA ++ ++ G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
+P+V+ Y+T+I+ LC+ GH AL+LF++M N G+ P+ V YT++++GLC G
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMEN----YGI--RPDVVMYTSLVNGLCNSG 226
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
A L M I P+V+T+N+LI F + +A+ L EM+ + PN+ T+
Sbjct: 227 RWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYT 286
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
+++ C G +DEA ++ LM G P+ Y +L++GFC +V+ A ++F M
Sbjct: 287 SLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK 346
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 447
+ +Y+ LI G+ + + A ++S M+S+G+ P++ YN L L +V++A
Sbjct: 347 GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKA 406
Query: 448 FKLFDEMRR---DGVAADTWTYRTFI 470
+F++M++ DGVA + WTY +
Sbjct: 407 LMIFEDMQKREMDGVAPNIWTYNVLL 432
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 208/406 (51%), Gaps = 21/406 (5%)
Query: 69 FLRERFKSSGEGDITTITP-----------NEAFCIFDYMLNMRPSPPPVSSFNILFGCL 117
FL + K E DI T T EA + + M+ M P V + + L
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM-GIKPDVVMYTTIIDSL 187
Query: 118 AKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDA 177
KN H + LSLF ++ + G+ PD+ Y L+N C GR +L + + PD
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 178 VTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEE 237
+TFN+LI E + ++A L+ ++ PN+ TY++LING C G A +F
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 238 MANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 297
M C P+ V YT++I+G CK VD A ++F +M + + N +TY +LI G
Sbjct: 308 METKG------CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQG 361
Query: 298 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI---GV 354
F N A+ + M+ +GV PN+ T+NV++ LC NGK+ +A + + M + GV
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Query: 355 RPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALS 414
PN + YN L+ G C G++ +A +F M + +Y+I+I G CK +++ A++
Sbjct: 422 APNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVN 481
Query: 415 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVA 460
L+ + SKG+KP+VV Y T+ GLF A LF +M+ DGV+
Sbjct: 482 LFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 89.0 bits (219), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 90/180 (50%)
Query: 291 YNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 350
Y ++ ++ +NEA L M++ P+++ F +++ + K K D L D +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 351 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIE 410
+GV + + N LM+ FC + + A M D+ +++ LING+C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 411 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
A+S+ ++M+ GIKPDVV+Y T+ L + V A LFD+M G+ D Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 206/369 (55%), Gaps = 12/369 (3%)
Query: 102 PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPG 161
P P ++ F L K + +L + L +G PD+ TYN++I+ +CK G ++
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEI---LEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 162 FVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLING 221
VL R+ +PD VT+N++++ LC ++ +A + ++ C P+VITY+ LI
Sbjct: 192 LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 222 LCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKD 281
CR A+ L +EM + C P+ VTY +++G+CKEG +D+A + M
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRG------CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 282 ENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 341
PNV+T+N ++ C W +A+ LL +M+ +G P+VVTFN++++ LC+ G +
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGR 362
Query: 342 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILIN 401
A +L+ M Q G +PN+ YN L+ GFC +++RA E M S C D+ +Y+ ++
Sbjct: 363 AIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLT 422
Query: 402 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAA 461
CK+ ++E A+ + +++ SKG P ++ YNT+ GL + + +A KL DEMR +
Sbjct: 423 ALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKP 482
Query: 462 DTWTYRTFI 470
DT TY + +
Sbjct: 483 DTITYSSLV 491
Score = 212 bits (540), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 111/383 (28%), Positives = 190/383 (49%), Gaps = 10/383 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N A + D M P V ++N + L + + + R+ +PD+ TY I
Sbjct: 189 NNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTI 244
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
LI C+ V +L + TPD VT+N L+ G+C E R+ EA + + G
Sbjct: 245 LIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
C+PNVIT++ ++ +C TG + A L +M P+ VT+ +I+ LC++G
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG------FSPSVVTFNILINFLCRKG 358
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
+ +A ++ KM PN ++YN L+HGFC + A L M+ +G P++VT+N
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
++ LCK+GK+++A +L+ + G P YNT++DG G+ +A +L M +
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 447
D +YS L+ G + +++ A+ + E GI+P+ V +N++ +GL + Q +RA
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Query: 448 FKLFDEMRRDGVAADTWTYRTFI 470
M G + +Y I
Sbjct: 539 IDFLVFMINRGCKPNETSYTILI 561
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 105/371 (28%), Positives = 190/371 (51%), Gaps = 7/371 (1%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+A + D ML R P V ++ IL ++ + L + G PD+ TYN+L
Sbjct: 222 QAMEVLDRMLQ-RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
+N CK GR+ L + S P+ +T N +++ +C+ R M+A L + G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
P+V+T++ LIN LCR G A+++ E+M C+PN+++Y ++ G CKE
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG------CQPNSLSYNPLLHGFCKEKK 394
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
+D+A E +M P++VTYN+++ C +A +L ++ +G P ++T+N
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNR 388
++D L K GK +A +LLD M ++P+ Y++L+ G G+V+ A + F E
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 389 CMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 448
+ +++ ++ G CK+++ + A+ M+++G KP+ Y L GL + A
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 449 KLFDEMRRDGV 459
+L +E+ G+
Sbjct: 575 ELLNELCNKGL 585
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 3/147 (2%)
Query: 324 VTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS 383
V N + ++ + G+++E + L+ M+ G P+ TL+ GFC G+ +A ++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 384 MESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 443
+E + + DV +Y+++I+GYCK EI ALS+ M + PDVV YNT+ L + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 444 VERAFKLFDEMRRDGVAADTWTYRTFI 470
+++A ++ D M + D TY I
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILI 246
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/422 (33%), Positives = 216/422 (51%), Gaps = 49/422 (11%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A FDYM+ RP V N + G + D +SL++++ + ++Y++NI
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDC-NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRI-------------- 193
LI CFC ++S G++ + F PD VTFN+L+ GLC E RI
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 194 -MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC--- 249
+EA ALF ++ G P VIT++TLINGLC G + A L +M I VV
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 250 --------------------------EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 283
+P+ V Y+ IID LCK+G A+ LF +M ++
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 284 INPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 343
I PNV TYN +I GFC W++A+ LL +M+++ + P+V+TFN ++ K GK+ EA
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 344 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGY 403
+L D M+ + P+ YN+++ GFC R + AK +F M S DV +++ +I+ Y
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVY 442
Query: 404 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADT 463
C+ K ++ + L E+ +G+ + YNTL G E+ + A LF EM GV DT
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 464 WT 465
T
Sbjct: 503 IT 504
Score = 209 bits (532), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 195/363 (53%), Gaps = 10/363 (2%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V ++ + L K+ H+ LF + G+ P+++TYN +I+ FC GR S +
Sbjct: 294 PDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRL 353
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
L ++ PD +TFN+LI E ++ EA L ++ P+ +TY+++I G C+
Sbjct: 354 LRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK 413
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
A ++F+ MA+ P+ VT+ TIID C+ VD+ +L ++ +
Sbjct: 414 HNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGL 463
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
N TYN+LIHGFC ++ N A+ L EM+ GV P+ +T N+++ C+N K++EA
Sbjct: 464 VANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE 523
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
L +++ + + YN ++ G C +V+ A +LF S+ + DV +Y+++I+G+C
Sbjct: 524 LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFC 583
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTW 464
I A L+ +M G +PD YNTL G + +++++ +L EMR +G + D +
Sbjct: 584 GKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Query: 465 TYR 467
T +
Sbjct: 644 TIK 646
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 146/498 (29%), Positives = 216/498 (43%), Gaps = 119/498 (23%)
Query: 87 PNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYN 146
P+ A ++ M +R P + SFNIL C LS F +L G PD+ T+N
Sbjct: 122 PDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFN 180
Query: 147 ILINCFCKMGRVSPGFVVLGRILRSCF---------------TPDAVTFNSLIKGLCAES 191
L++ C R+S + G ++ + F TP +TFN+LI GLC E
Sbjct: 181 TLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEG 240
Query: 192 RIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVV--- 248
R++EAAAL K+ G +V+TY T++NG+C+ G T ALNL +M + + VV
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 249 ------CE--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 282
C+ PN TY +IDG C G A+ L M +
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 283 NINPNV-----------------------------------VTYNSLIHGFCYANDWNEA 307
INP+V VTYNS+I+GFC N +++A
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 308 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 367
K M D P+VVTFN I+D C+ ++DE +LL + + G+ N YNTL+ G
Sbjct: 421 K----HMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 368 FCLTGRVNRAKELFVSMESN-----------------------------------RCMHD 392
FC +N A++LF M S+ + D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 393 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 452
+Y+I+I+G CK +++ A L+ + G++PDV YN + G + A LF
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 453 EMRRDGVAADTWTYRTFI 470
+M+ +G D TY T I
Sbjct: 597 KMKDNGHEPDNSTYNTLI 614
Score = 142 bits (358), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/301 (30%), Positives = 143/301 (47%), Gaps = 10/301 (3%)
Query: 101 RPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSP 160
R P V +FN L K L + +FPD TYN +I FCK R
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419
Query: 161 GFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLIN 220
+ +PD VTFN++I C R+ E L ++ G N TY+TLI+
Sbjct: 420 A----KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 475
Query: 221 GLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 280
G C + A +LF+EM + VC P+T+T ++ G C+ +++A ELF ++
Sbjct: 476 GFCEVDNLNAAQDLFQEMISHG-----VC-PDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 281 DENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 340
I+ + V YN +IHG C + +EA L + GV+P+V T+NV++ C +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 341 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILI 400
+A+ L M G P+ YNTL+ G G ++++ EL M SN D F+ ++
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVA 649
Query: 401 N 401
+
Sbjct: 650 D 650
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 145/289 (50%), Gaps = 12/289 (4%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + D ML+ P V+ ++++G K+ +D +F + S PD+ T+N +
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYG-FCKHNRFDDAKHMFDLMAS----PDVVTFNTI 438
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
I+ +C+ RV G +L I R + T+N+LI G C + A LF ++ + G
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 498
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
P+ IT + L+ G C AL LFE + ++ +TV Y II G+CK
Sbjct: 499 CPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDL------DTVAYNIIIHGMCKGSK 552
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
VD+A +LF + + P+V TYN +I GFC + ++A L +M D G +P+ T+N
Sbjct: 553 VDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNT 612
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 377
++ K G++D++ L+ M G +AF + D GR++++
Sbjct: 613 LIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVAD-LITDGRLDKS 660
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 214/381 (56%), Gaps = 7/381 (1%)
Query: 90 AFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 149
A +FD M + P V ++N L K + D L + + GL P+L +YN++I
Sbjct: 224 ALTLFDKM-ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVI 282
Query: 150 NCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCE 209
N C+ GR+ VL + R ++ D VT+N+LIKG C E +A + ++ G
Sbjct: 283 NGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLT 342
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFV 269
P+VITY++LI+ +C+ G+ A+ ++M + +C PN TYTT++DG ++G++
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQM-----RVRGLC-PNERTYTTLVDGFSQKGYM 396
Query: 270 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 329
++A + +M D +P+VVTYN+LI+G C +A +L +M ++G+ P+VV+++ +
Sbjct: 397 NEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTV 456
Query: 330 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRC 389
+ C++ +DEA R+ M++ G++P+ Y++L+ GFC R A +L+ M
Sbjct: 457 LSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 390 MHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 449
D F+Y+ LIN YC ++E AL L++EM+ KG+ PDVV Y+ L GL + + A +
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 450 LFDEMRRDGVAADTWTYRTFI 470
L ++ + TY T I
Sbjct: 577 LLLKLFYEESVPSDVTYHTLI 597
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 197/367 (53%), Gaps = 7/367 (1%)
Query: 105 PPVSSFN-ILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFV 163
P V S+N +L + ++ ++FK + + + P+++TYNILI FC G +
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 164 VLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLC 223
+ ++ P+ VT+N+LI G C +I + L + G EPN+I+Y+ +INGLC
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 224 RTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 283
R G + EM + + VTY T+I G CKEG +A + +M
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSL------DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 284 INPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 343
+ P+V+TY SLIH C A + N A L +M +G+ PN T+ ++D + G M+EA
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 344 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGY 403
R+L M G P+ YN L++G C+TG++ A + M+ DV SYS +++G+
Sbjct: 401 RVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGF 460
Query: 404 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADT 463
C++ +++ AL + EM+ KGIKPD + Y++L G E + + A L++EM R G+ D
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 464 WTYRTFI 470
+TY I
Sbjct: 521 FTYTALI 527
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 181/334 (54%), Gaps = 21/334 (6%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V ++ L + K + + + ++ GL P+ TY L++ F + G ++ + V
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
L + + F+P VT+N+LI G C ++ +A A+ +K G P+V++YST+++G CR
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
+ AL + EM E G+ +P+T+TY+++I G C++ +A +L+ +M +
Sbjct: 463 SYDVDEALRVKREMV----EKGI--KPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGL 516
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
P+ TY +LI+ +C D +A L EM+++GV P+VVT++V+++ L K + EA R
Sbjct: 517 PPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKR 576
Query: 345 LLDLMIQIGVRPNAFVYNTLMD---------------GFCLTGRVNRAKELFVSMESNRC 389
LL + P+ Y+TL++ GFC+ G + A ++F SM
Sbjct: 577 LLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNH 636
Query: 390 MHDVFSYSILINGYCKNKEIEGALSLYSEMLSKG 423
D +Y+I+I+G+C+ +I A +LY EM+ G
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Score = 134 bits (338), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 162/355 (45%), Gaps = 22/355 (6%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
NEA+ + M N P V ++N L + +++ + + GL PD+ +Y+
Sbjct: 397 NEAYRVLREM-NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+++ FC+ V V ++ PD +T++SLI+G C + R EA L+ ++ G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
P+ TY+ LIN C G AL L EM E GV+ P+ VTY+ +I+GL K+
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMV----EKGVL--PDVVTYSVLINGLNKQS 569
Query: 268 FVDKAKELFLKMKDENINPNVVTYN---------------SLIHGFCYANDWNEAKCLLI 312
+AK L LK+ E P+ VTY+ SLI GFC EA +
Sbjct: 570 RTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 313 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 372
M+ + +P+ +N+++ C+ G + +A L M++ G + L+ G
Sbjct: 630 SMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Query: 373 RVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 427
+VN + V + + + + +L+ + ++ L + +EM G P+
Sbjct: 690 KVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 118 bits (295), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 118/261 (45%), Gaps = 40/261 (15%)
Query: 248 VCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS-------------- 293
+C + + ++ + +DKA + + P V++YN+
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 294 ----------------------LIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 331
LI GFC+A + + A L +M +G PNVVT+N ++D
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 332 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMH 391
CK K+D+ +LL M G+ PN YN +++G C GR+ FV E NR +
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVS--FVLTEMNRRGY 306
Query: 392 --DVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 449
D +Y+ LI GYCK AL +++EML G+ P V+ Y +L + + + RA +
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 450 LFDEMRRDGVAADTWTYRTFI 470
D+MR G+ + TY T +
Sbjct: 367 FLDQMRVRGLCPNERTYTTLV 387
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 126/281 (44%), Gaps = 30/281 (10%)
Query: 80 GDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLF 139
G T +A + + M SP VS +L G ++ D L + + + G+
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSG-FCRSYDVDEALRVKREMVEKGIK 482
Query: 140 PDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAAL 199
PD TY+ LI FC+ R + +LR PD T+ +LI C E + +A L
Sbjct: 483 PDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 200 FTKLKAFGCEPNVITYSTLINGLCRTGHTIVA----LNLFEEMANGNGEIGVVCEPNTVT 255
++ G P+V+TYS LINGL + T A L LF E + P+ VT
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES----------VPSDVT 592
Query: 256 YTTIID---------------GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY 300
Y T+I+ G C +G + +A ++F M +N P+ YN +IHG C
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 301 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 341
A D +A L EM+ G + VT ++ L K GK++E
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 236 bits (601), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 138/429 (32%), Positives = 228/429 (53%), Gaps = 34/429 (7%)
Query: 71 RERFKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLF 130
RER +S + +I N+A +F M P P V F+ L +AK Y+ V+SLF
Sbjct: 48 RERLRSG----LHSIKFNDALTLFCDMAESHPLPSIVD-FSRLLIAIAKLNKYEAVISLF 102
Query: 131 KRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAE 190
+ L G+ DLY++ LI+CFC+ R+S LG++++ F P VTF SL+ G C
Sbjct: 103 RHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV 162
Query: 191 SRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMAN---------- 240
+R EA +L ++ G EPNV+ Y+T+I+ LC G AL++ + M
Sbjct: 163 NRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTY 222
Query: 241 --------GNGEIGVVCE-----------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKD 281
+G GV P+ +T++ +ID KEG + +AK+ + +M
Sbjct: 223 NSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQ 282
Query: 282 ENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDE 341
++NPN+VTYNSLI+G C +EAK +L ++ +G PN VT+N +++ CK ++D+
Sbjct: 283 RSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDD 342
Query: 342 ASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILIN 401
++L +M + GV + F YNTL G+C G+ + A+++ M S D+++++IL++
Sbjct: 343 GMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Query: 402 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAA 461
G C + +I AL ++ ++ YN + GL + +VE A+ LF + GV+
Sbjct: 403 GLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSP 462
Query: 462 DTWTYRTFI 470
D TY T +
Sbjct: 463 DVITYITMM 471
Score = 89.0 bits (219), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 6/179 (3%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P ++N L K K D + + ++ G+ D +TYN L +C+ G+ S V
Sbjct: 322 PNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKV 381
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
LGR++ PD TFN L+ GLC +I +A L+ +ITY+ +I GLC+
Sbjct: 382 LGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCK 441
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 283
A LF +A P+ +TY T++ GL ++ +A EL+ KM+ E+
Sbjct: 442 ADKVEDAWYLFCSLALKG------VSPDVITYITMMIGLRRKRLWREAHELYRKMQKED 494
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRI 168
++N L+ + + + R+ S G+ PD+YT+NIL++ C G++ V L +
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 169 LRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHT 228
+S +T+N +IKGLC ++ +A LF L G P+VITY T++ GL R
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLW 480
Query: 229 IVALNLFEEMANGNG 243
A L+ +M +G
Sbjct: 481 REAHELYRKMQKEDG 495
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 233 bits (595), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 215/412 (52%), Gaps = 30/412 (7%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N+A +F M++ RP P + F L +AK YD V+SLF+++ G+ P L T NI
Sbjct: 65 NDALDLFTRMVHSRPLPS-IIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNI 123
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+++C C + LG++++ F PD VTF SL+ G C +RI +A ALF ++ G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC------------------ 249
+PNV+TY+TLI LC+ H A+ LF +M VV
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 250 -----------EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 298
EPN +T+T +ID K G + +AKEL+ M ++ P+V TY SLI+G
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 299 CYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNA 358
C +EA+ + M G PN V + ++ CK+ ++++ ++ M Q GV N
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 359 FVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSE 418
Y L+ G+CL GR + A+E+F M S R D+ +Y++L++G C N ++E AL ++
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 419 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
M + + ++V Y + G+ ++ +VE AF LF + G+ + TY T I
Sbjct: 424 MRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMI 475
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 86/181 (47%)
Query: 290 TYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 349
+Y ++ + +N+A L M+ P+++ F ++ + K + D L + M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 350 IQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEI 409
+G+ P N +M CL+ + RA M D+ +++ L+NGYC I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 410 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTF 469
E A++L+ ++L G KP+VV Y TL L + + A +LF++M +G + TY
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 470 I 470
+
Sbjct: 230 V 230
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 127/418 (30%), Positives = 227/418 (54%), Gaps = 42/418 (10%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+++ +F +M+ RP P ++ F+ L ++K K YD V+ L++++ G+ +L T NI
Sbjct: 63 DDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
L+NCFC+ ++S LG++++ P VTF SL+ G C R+ +A +F ++ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLC--- 264
+PNV+ Y+T+I+GLC++ AL+L M IG P+ VTY ++I GLC
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG--IG----PDVVTYNSLISGLCSSG 235
Query: 265 --------------------------------KEGFVDKAKELFLKMKDENINPNVVTYN 292
KEG V +A+E + +M +++P++VTY+
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 293 SLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 352
LI+G C + +EA+ + M+ +G P+VVT++++++ CK+ K++ +L M Q
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 353 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGA 412
GV N Y L+ G+C G++N A+E+F M ++ +Y++L++G C N +IE A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 413 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
L + ++M G+ D+V YN + G+ + +V A+ ++ + G+ D WTY T +
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMM 473
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/339 (32%), Positives = 175/339 (51%), Gaps = 7/339 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+A +FD M+ M P V +N + L K+K D L L R+ G+ PD+ TYN L
Sbjct: 169 DALYMFDQMVGM-GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
I+ C GR S ++ + + PD TFN+LI E R+ EA + ++
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
+P+++TYS LI GLC A +F M + C P+ VTY+ +I+G CK
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG------CFPDVVTYSILINGYCKSKK 341
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
V+ +LF +M + N VTY LI G+C A N A+ + M+ GV PN++T+NV
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNR 388
++ LC NGK+++A +L M + G+ + YN ++ G C G V A +++ S+
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 389 CMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 427
M D+++Y+ ++ G K A +L+ +M GI P+
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%)
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
+D + +LF M P++ ++ L+ ++ L +M G+ N+ T N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNR 388
+++ C+ ++ A L MI++G P+ + +L++GFC RV A +F M
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 389 CMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 448
+V Y+ +I+G CK+K+++ AL L + M GI PDVV YN+L GL + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 449 KLFDEMRRDGVAADTWTYRTFI 470
++ M + + D +T+ I
Sbjct: 242 RMVSCMTKREIYPDVFTFNALI 263
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 77/178 (43%), Gaps = 39/178 (21%)
Query: 332 ELCKNG----KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
E+ +NG K+D++ L M+Q P+ ++ L+ + + L+ M+
Sbjct: 51 EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 388 RCMHDVFSYSILI-----------------------------------NGYCKNKEIEGA 412
H++ + +IL+ NG+C+ + A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 413 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
L ++ +M+ G KP+VVIYNT+ GL + QV+ A L + M +DG+ D TY + I
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 139/436 (31%), Positives = 227/436 (52%), Gaps = 34/436 (7%)
Query: 64 ASLEKFLRERFKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHY 123
AS RER ++ ++ I ++AF +F ML RP P V F + +AK +
Sbjct: 41 ASHHHHYRERLRN----ELHCIKFDDAFSLFCEMLQSRPIPSIVD-FTRVLTVIAKMNKF 95
Query: 124 DTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSL 183
D V+ L+ ++ + G+ DLY++ ILI+CFC+ R+S +LG++++ F P VT SL
Sbjct: 96 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 155
Query: 184 IKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNG 243
+ G C +R EA +L + FG PNV+ Y+T+INGLC+ AL +F M
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 215
Query: 244 EIGVVC-----------------------------EPNTVTYTTIIDGLCKEGFVDKAKE 274
V +PN + +T +ID KEG + +A+
Sbjct: 216 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 275
Query: 275 LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC 334
L+ +M ++ PNV TYNSLI+GFC +AK + M+ +G P+VVT+N ++ C
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFC 335
Query: 335 KNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVF 394
K+ ++++ +L M G+ +AF YNTL+ G+C G++N A+++F M D+
Sbjct: 336 KSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIV 395
Query: 395 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 454
+Y+IL++ C N +IE AL + ++ + D++ YN + GL +++ A+ LF +
Sbjct: 396 TYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455
Query: 455 RRDGVAADTWTYRTFI 470
R GV D Y T I
Sbjct: 456 TRKGVKPDAIAYITMI 471
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 180/362 (49%), Gaps = 6/362 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P + + L + + +SL ++ G P++ YN +IN CK ++ V
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
+ + DAVT+N+LI GL R +AA L + +PNVI ++ LI+ +
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
G+ + A NL++EM I PN TY ++I+G C G + AK +F M +
Sbjct: 267 EGNLLEARNLYKEM------IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
P+VVTYN+LI GFC + + L EM QG+ + T+N ++ C+ GK++ A +
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
+ + M+ GV P+ YN L+D C G++ +A + ++ + D+ +Y+I+I G C
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTW 464
+ +++ A L+ + KG+KPD + Y T+ GL A KL M+ DG
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSER 500
Query: 465 TY 466
Y
Sbjct: 501 IY 502
Score = 172 bits (435), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 166/328 (50%), Gaps = 6/328 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V +N + L KN+ + L +F + G+ D TYN LI+ GR + +
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARL 241
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
L +++ P+ + F +LI E ++EA L+ ++ PNV TY++LING C
Sbjct: 242 LRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCI 301
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
G A +F+ M + C P+ VTY T+I G CK V+ +LF +M + +
Sbjct: 302 HGCLGDAKYMFDLMVSKG------CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 355
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
+ TYN+LIHG+C A N A+ + M+D GV P++VT+N+++D LC NGK+++A
Sbjct: 356 VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 415
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
+++ + + + + YN ++ G C T ++ A LF S+ D +Y +I+G C
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 475
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYN 432
+ A L M G P IY+
Sbjct: 476 RKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 109/204 (53%), Gaps = 7/204 (3%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+A +FD M++ + P V ++N L K+K + + LF + GL D +TYN L
Sbjct: 307 DAKYMFDLMVS-KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
I+ +C+ G+++ V R++ +PD VT+N L+ LC +I +A + L+
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
+ ++ITY+ +I GLCRT A LF + GV +P+ + Y T+I GLC++G
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK----GV--KPDAIAYITMISGLCRKGL 479
Query: 269 VDKAKELFLKMKDENINPNVVTYN 292
+A +L +MK++ P+ Y+
Sbjct: 480 QREADKLCRRMKEDGFMPSERIYD 503
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 227 bits (579), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 187/331 (56%), Gaps = 6/331 (1%)
Query: 140 PDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAAL 199
PD++ YN LIN FCKM R+ VL R+ F+PD VT+N +I LC+ ++ A +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 200 FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTI 259
+L + C+P VITY+ LI G AL L +EM + +P+ TY TI
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTI 269
Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGV 319
I G+CKEG VD+A E+ ++ + P+V++YN L+ W E + L+ +M +
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 320 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 379
PNVVT+++++ LC++GK++EA LL LM + G+ P+A+ Y+ L+ FC GR++ A E
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 380 LFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 439
+M S+ C+ D+ +Y+ ++ CKN + + AL ++ ++ G P+ YNT+F L+
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 440 EIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
RA + EM +G+ D TY + I
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 189/383 (49%), Gaps = 7/383 (1%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A + D M + SP V+ +NI+ G L D L + +L S P + TY I
Sbjct: 175 DDATRVLDRMRSKDFSPDTVT-YNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTI 233
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
LI G V ++ +L PD T+N++I+G+C E + A + L+ G
Sbjct: 234 LIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG 293
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
CEP+VI+Y+ L+ L G L +M + C+PN VTY+ +I LC++G
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK------CDPNVVTYSILITTLCRDG 347
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
+++A L MK++ + P+ +Y+ LI FC + A L M+ G P++V +N
Sbjct: 348 KIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYN 407
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESN 387
++ LCKNGK D+A + + ++G PN+ YNT+ +G RA + + M SN
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN 467
Query: 388 RCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 447
D +Y+ +I+ C+ ++ A L +M S P VV YN + +G + H++E A
Sbjct: 468 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527
Query: 448 FKLFDEMRRDGVAADTWTYRTFI 470
+ + M +G + TY I
Sbjct: 528 INVLESMVGNGCRPNETTYTVLI 550
Score = 169 bits (429), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 159/328 (48%), Gaps = 31/328 (9%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V ++ IL D L L + S GL PD++TYN +I CK G V F +
Sbjct: 226 PTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEM 285
Query: 165 LGRI-LRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLC 223
+ + L+ C PD +++N L++ L + + E L TK+ + C+PNV+TYS LI LC
Sbjct: 286 VRNLELKGC-EPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344
Query: 224 RTGHTIVALNLFEEMANGN------------------GEIGVV-----------CEPNTV 254
R G A+NL + M G + V C P+ V
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404
Query: 255 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEM 314
Y T++ LCK G D+A E+F K+ + +PN +YN++ + D A +++EM
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464
Query: 315 MDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRV 374
M G+ P+ +T+N ++ LC+ G +DEA LL M P+ YN ++ GFC R+
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 524
Query: 375 NRAKELFVSMESNRCMHDVFSYSILING 402
A + SM N C + +Y++LI G
Sbjct: 525 EDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 140/283 (49%), Gaps = 7/283 (2%)
Query: 188 CAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGV 247
C +E+ L + G P+VI + LI G + A+ + E +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK------- 152
Query: 248 VCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 307
+P+ Y +I+G CK +D A + +M+ ++ +P+ VTYN +I C + A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212
Query: 308 KCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDG 367
+L +++ QP V+T+ ++++ G +DEA +L+D M+ G++P+ F YNT++ G
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272
Query: 368 FCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 427
C G V+RA E+ ++E C DV SY+IL+ + E L ++M S+ P+
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332
Query: 428 VVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
VV Y+ L L ++E A L M+ G+ D ++Y I
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 225 bits (573), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 198/365 (54%), Gaps = 11/365 (3%)
Query: 94 FDYM----LNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 149
+DY+ +NM SP +S FN++ L K + D + +F+ + PD YTY L+
Sbjct: 171 YDYVVNSNMNMNISPNGLS-FNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLM 229
Query: 150 NCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCE 209
+ CK R+ ++L + +P V +N LI GLC + + L + GC
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFV 269
PN +TY+TLI+GLC G A++L E M + C PN VTY T+I+GL K+
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSK------CIPNDVTYGTLINGLVKQRRA 343
Query: 270 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 329
A L M++ + N Y+ LI G EA L +M ++G +PN+V ++V+
Sbjct: 344 TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 330 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRC 389
+D LC+ GK +EA +L+ MI G PNA+ Y++LM GF TG A +++ M+ C
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Query: 390 MHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 449
+ F YS+LI+G C ++ A+ ++S+ML+ GIKPD V Y+++ GL I ++ A K
Sbjct: 464 SRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Query: 450 LFDEM 454
L+ EM
Sbjct: 524 LYHEM 528
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 118/356 (33%), Positives = 186/356 (52%), Gaps = 10/356 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + D M + SP PV +N+L L K V L + G P+ TYN
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVI-YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ C G++ +L R++ S P+ VT+ +LI GL + R +A L + ++ G
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
N YS LI+GL + G A++L+ +MA C+PN V Y+ ++DGLC+EG
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG------CKPNIVVYSVLVDGLCREG 411
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
++AKE+ +M PN TY+SL+ GF EA + EM G N ++
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471
Query: 328 VIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--- 384
V++D LC G++ EA + M+ IG++P+ Y++++ G C G ++ A +L+ M
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ 531
Query: 385 ESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 440
E + DV +Y+IL++G C K+I A+ L + ML +G PDV+ NT L E
Sbjct: 532 EEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSE 587
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 146/277 (52%), Gaps = 3/277 (1%)
Query: 195 EAAALFTKL-KAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNT 253
+A LF ++ F C+ +V ++++++N + G L ++ + N N + + PN
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI--SPNG 187
Query: 254 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIE 313
+++ +I LCK FVD+A E+F M + P+ TY +L+ G C +EA LL E
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 314 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 373
M +G P+ V +NV++D LCK G + ++L+D M G PN YNTL+ G CL G+
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 307
Query: 374 VNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 433
+++A L M S++C+ + +Y LING K + A+ L S M +G + IY+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 434 LFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
L GLF+ + E A L+ +M G + Y +
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 6/261 (2%)
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFV 269
PN ++++ +I LC+ A+ +F M C P+ TY T++DGLCKE +
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERK------CLPDGYTYCTLMDGLCKEERI 238
Query: 270 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVI 329
D+A L +M+ E +P+ V YN LI G C D L+ M +G PN VT+N +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 330 MDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRC 389
+ LC GK+D+A LL+ M+ PN Y TL++G R A L SME
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 390 MHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 449
+ YS+LI+G K + E A+SL+ +M KG KP++V+Y+ L GL + A +
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 450 LFDEMRRDGVAADTWTYRTFI 470
+ + M G + +TY + +
Sbjct: 419 ILNRMIASGCLPNAYTYSSLM 439
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 157/308 (50%), Gaps = 25/308 (8%)
Query: 110 FNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRIL 169
+++L L K + +SL++++ G P++ Y++L++ C+ G+ + +L R++
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 170 RSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTI 229
S P+A T++SL+KG EA ++ ++ GC N YS LI+GLC G
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 230 VALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKM---KDENINP 286
A+ ++ +M IG+ +P+TV Y++II GLC G +D A +L+ +M ++ P
Sbjct: 485 EAMMVWSKMLT----IGI--KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 287 NVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELC-KNGKMDEASRL 345
+VVTYN L+ G C D + A LL M+D+G P+V+T N ++ L K+ D+
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSF 598
Query: 346 LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCK 405
L+ ++ VR + + G C V K L ++++++ CK
Sbjct: 599 LEELV---VR---LLKRQRVSGACTIVEVMLGKYL---------APKTSTWAMIVREICK 643
Query: 406 NKEIEGAL 413
K+I A+
Sbjct: 644 PKKINAAI 651
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 224 bits (572), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 116/341 (34%), Positives = 181/341 (53%), Gaps = 6/341 (1%)
Query: 130 FKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCA 189
F + G+ PD Y LI+ FCK G + + TPD +T+ ++I G C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 190 ESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC 249
++EA LF ++ G EP+ +T++ LING C+ GH A + M I C
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM------IQAGC 452
Query: 250 EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 309
PN VTYTT+IDGLCKEG +D A EL +M + PN+ TYNS+++G C + + EA
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 310 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 369
L+ E G+ + VT+ +MD CK+G+MD+A +L M+ G++P +N LM+GFC
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 370 LTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 429
L G + ++L M + + +++ L+ YC ++ A ++Y +M S+G+ PD
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 430 IYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
Y L G + ++ A+ LF EM+ G + TY I
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLI 673
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 210/418 (50%), Gaps = 43/418 (10%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYD-TVLSLFKRLNSTGLFPDLYTYNI 147
EA +F+ MLN V S N+ L+K+ + T + +F+ G+ ++ +YNI
Sbjct: 193 EARRVFEKMLNY-GLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+I+ C++GR+ +L + +TPD +++++++ G C + + L +K G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
+PN Y ++I LCR A F EM G++ P+TV YTT+IDG CK G
Sbjct: 312 LKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ----GIL--PDTVVYTTLIDGFCKRG 365
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQ------- 320
+ A + F +M +I P+V+TY ++I GFC D EA L EM +G++
Sbjct: 366 DIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFT 425
Query: 321 ----------------------------PNVVTFNVIMDELCKNGKMDEASRLLDLMIQI 352
PNVVT+ ++D LCK G +D A+ LL M +I
Sbjct: 426 ELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI 485
Query: 353 GVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGA 412
G++PN F YN++++G C +G + A +L E+ D +Y+ L++ YCK+ E++ A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 413 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ EML KG++P +V +N L G +E KL + M G+A + T+ + +
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 186 bits (472), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 103/339 (30%), Positives = 173/339 (51%), Gaps = 6/339 (1%)
Query: 94 FDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC 153
F Y ++ R P V ++ + + LF + GL PD T+ LIN +C
Sbjct: 373 FFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 154 KMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVI 213
K G + F V ++++ +P+ VT+ +LI GLC E + A L ++ G +PN+
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 214 TYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAK 273
TY++++NGLC++G+ A+ L E +TVTYTT++D CK G +DKA+
Sbjct: 493 TYNSIVNGLCKSGNIEEAVKLVGEFEAAG------LNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 274 ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 333
E+ +M + + P +VT+N L++GFC + + LL M+ +G+ PN TFN ++ +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 334 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDV 393
C + A+ + M GV P+ Y L+ G C + A LF M+ V
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSV 666
Query: 394 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 432
+YS+LI G+ K K+ A ++ +M +G+ D I++
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 141/271 (52%), Gaps = 15/271 (5%)
Query: 204 KAFGCEPNV--ITYSTLIN-GLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTV-TYTTI 259
K +G +P V + + L++ GL R A +FE+M N G+V ++ Y T
Sbjct: 169 KDWGSDPRVFDVFFQVLVDFGLLRE-----ARRVFEKMLN----YGLVLSVDSCNVYLTR 219
Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGV 319
+ C + A +F + + + NV +YN +IH C EA LL+ M +G
Sbjct: 220 LSKDCYK--TATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGY 277
Query: 320 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 379
P+V++++ +++ C+ G++D+ +L+++M + G++PN+++Y +++ C ++ A+E
Sbjct: 278 TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 380 LFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 439
F M + D Y+ LI+G+CK +I A + EM S+ I PDV+ Y + G
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 440 EIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+I + A KLF EM G+ D+ T+ I
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 18/318 (5%)
Query: 60 VKDRASLEKFLRERFKSSGEGDITTITP-----------NEAFCIFDYMLNMRPSPPPVS 108
+ D K E F E D T T +AF + ++M+ SP V
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN-VV 457
Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRI 168
++ L L K D+ L + GL P+++TYN ++N CK G + ++G
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 169 LRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHT 228
+ D VT+ +L+ C + +A + ++ G +P ++T++ L+NG C G
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG-- 575
Query: 229 IVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 288
L E++ N G+ PN T+ +++ C + A ++ M + P+
Sbjct: 576 --MLEDGEKLLNWMLAKGIA--PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 289 VTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 348
TY +L+ G C A + EA L EM +G +V T++V++ K K EA + D
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 349 MIQIGVRPNAFVYNTLMD 366
M + G+ + +++ D
Sbjct: 692 MRREGLAADKEIFDFFSD 709
Score = 98.6 bits (244), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 115/248 (46%), Gaps = 8/248 (3%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P + ++N + L K+ + + + L + GL D TY L++ +CK G + +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
L +L P VTFN L+ G C + + L + A G PN T+++L+ C
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 225 TGHTIVALNLFEEM-ANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 283
+ A ++++M + G G P+ TY ++ G CK + +A LF +MK +
Sbjct: 609 RNNLKAATAIYKDMCSRGVG-------PDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Query: 284 INPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 343
+ +V TY+ LI GF + EA+ + +M +G+ + F+ D K + D
Sbjct: 662 FSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIV 721
Query: 344 RLLDLMIQ 351
+D +I+
Sbjct: 722 DPIDEIIE 729
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 222 bits (565), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 127/386 (32%), Positives = 211/386 (54%), Gaps = 10/386 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL-NSTGL--FPDLYT 144
++AF +F M P P V FN + +AK + YD V++L+KR+ N+ G+ PDLYT
Sbjct: 67 DDAFHLFVLMAYSYPLPSIVE-FNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYT 125
Query: 145 YNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLK 204
NIL+NCFC+ + S LG++++ PD VT +SL+ G C + I +A + +++
Sbjct: 126 CNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME 185
Query: 205 AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLC 264
G + +V+ + LI+ LC+ + AL + + M + PN VTY+++I GLC
Sbjct: 186 KMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG------ISPNVVTYSSLITGLC 239
Query: 265 KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVV 324
K G + A+ +M + INPNV+T+++LI + ++ + M+ + PNV
Sbjct: 240 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 299
Query: 325 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM 384
T++ ++ LC + ++DEA ++LDLMI G PN Y+TL +GF + RV+ +L M
Sbjct: 300 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 359
Query: 385 ESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 444
+ S + LI GY + +I+ AL ++ M S G+ P++ YN + GLF +V
Sbjct: 360 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 419
Query: 445 ERAFKLFDEMRRDGVAADTWTYRTFI 470
E+A F+ M++ D TY I
Sbjct: 420 EKALSRFEHMQKTRNDLDIITYTIMI 445
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 171/380 (45%), Gaps = 73/380 (19%)
Query: 159 SPGFVVLGRILR-----SCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVI 213
+PG +VL LR F+ + + +++ + +A LF + P+++
Sbjct: 28 NPG-IVLSPSLRFRFWVRAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIV 86
Query: 214 TYSTLINGLCRTGHTIVALNLFEEMANGNG----------EIGVVC-------------- 249
++ ++ + + V +NL++ + N G I V C
Sbjct: 87 EFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYL 146
Query: 250 --------EPNTVTYTTIIDG-----------------------------------LCKE 266
EP+ VT +++++G LCK
Sbjct: 147 GKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 206
Query: 267 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 326
V A E+ +MKD I+PNVVTY+SLI G C + +A+ L EM + + PNV+TF
Sbjct: 207 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 266
Query: 327 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 386
+ ++D K GK+ + + +MIQ+ + PN F Y++L+ G C+ RV+ A ++ M S
Sbjct: 267 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 326
Query: 387 NRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 446
C +V +YS L NG+ K+ ++ + L +M +G+ + V NTL G F+ +++
Sbjct: 327 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 386
Query: 447 AFKLFDEMRRDGVAADTWTY 466
A +F M +G+ + +Y
Sbjct: 387 ALGVFGYMTSNGLIPNIRSY 406
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 122/253 (48%), Gaps = 7/253 (2%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V +F+ L AK V S++K + + P+++TY+ LI C RV +
Sbjct: 261 PNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKM 320
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
L ++ TP+ VT+++L G SR+ + L + G N ++ +TLI G +
Sbjct: 321 LDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQ 380
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
G +AL +F M + NG I PN +Y ++ GL G V+KA F M+
Sbjct: 381 AGKIDLALGVFGYMTS-NGLI-----PNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 434
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
+ +++TY +IHG C A EA L ++ + V+P+ + +++ EL + G EA
Sbjct: 435 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADA 494
Query: 345 LLDLMIQIGVRPN 357
L+ Q VR N
Sbjct: 495 -LNRFYQKHVRQN 506
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 212 bits (539), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 198/382 (51%), Gaps = 6/382 (1%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+ +F M+ P V + + L L K +H+ + LF + S G+ PD+Y Y +
Sbjct: 174 DGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGV 233
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
I C++ +S ++ + + + V +N LI GLC + ++ EA + L
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
+P+V+TY TL+ GLC+ + L + +EM + + P+ +++++GL K G
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEM------LCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
+++A L ++ D ++PN+ YN+LI C ++EA+ L M G++PN VT+++
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNR 388
++D C+ GK+D A L M+ G++ + + YN+L++G C G ++ A+ M + +
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 389 CMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 448
V +Y+ L+ GYC +I AL LY EM KGI P + + TL GLF + A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 449 KLFDEMRRDGVAADTWTYRTFI 470
KLF+EM V + TY I
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMI 549
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/378 (30%), Positives = 194/378 (51%), Gaps = 7/378 (1%)
Query: 93 IFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 152
+ D ML +R SP + +++ G L K + L+L KR+ G+ P+L+ YN LI+
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEG-LRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSL 377
Query: 153 CKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNV 212
CK + ++ R+ + P+ VT++ LI C ++ A + ++ G + +V
Sbjct: 378 CKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSV 437
Query: 213 ITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKA 272
Y++LING C+ G A EM N EP VTYT+++ G C +G ++KA
Sbjct: 438 YPYNSLINGHCKFGDISAAEGFMAEMINKK------LEPTVVTYTSLMGGYCSKGKINKA 491
Query: 273 KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE 332
L+ +M + I P++ T+ +L+ G A +A L EM + V+PN VT+NV+++
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 333 LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHD 392
C+ G M +A L M + G+ P+ + Y L+ G CLTG+ + AK + C +
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611
Query: 393 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 452
Y+ L++G+C+ ++E ALS+ EM+ +G+ D+V Y L G + + F L
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLK 671
Query: 453 EMRRDGVAADTWTYRTFI 470
EM G+ D Y + I
Sbjct: 672 EMHDRGLKPDDVIYTSMI 689
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/366 (30%), Positives = 181/366 (49%), Gaps = 6/366 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P + +N L L K + + LF R+ GL P+ TY+ILI+ FC+ G++
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
LG ++ + +NSLI G C I A ++ EP V+TY++L+ G C
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
G AL L+ EM G G P+ T+TT++ GL + G + A +LF +M + N+
Sbjct: 485 KGKINKALRLYHEMT-GKG-----IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
PN VTYN +I G+C D ++A L EM ++G+ P+ ++ ++ LC G+ EA
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
+D + + N Y L+ GFC G++ A + M D+ Y +LI+G
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTW 464
K+K+ + L EM +G+KPD VIY ++ + + AF ++D M +G +
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 465 TYRTFI 470
TY I
Sbjct: 719 TYTAVI 724
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/448 (28%), Positives = 204/448 (45%), Gaps = 43/448 (9%)
Query: 62 DRASLEKFLRERFKSSGEGDITTITP-----------NEAFCIFDYMLNMRPSPPPVSSF 110
D ++ E F+ E E + T T N+A ++ M + P + +F
Sbjct: 452 DISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG-KGIAPSIYTF 510
Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILR 170
L L + + LF + + P+ TYN++I +C+ G +S F L +
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570
Query: 171 SCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIV 230
PD ++ LI GLC + EA L CE N I Y+ L++G CR G
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630
Query: 231 ALNLFEEMANGNGEIGVVC-----------------------------EPNTVTYTTIID 261
AL++ +EM ++ +VC +P+ V YT++ID
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMID 690
Query: 262 GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQP 321
K G +A ++ M +E PN VTY ++I+G C A NEA+ L +M P
Sbjct: 691 AKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVP 750
Query: 322 NVVTFNVIMDELCKNG-KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 380
N VT+ +D L K M +A L + +++ G+ N YN L+ GFC GR+ A EL
Sbjct: 751 NQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASEL 809
Query: 381 FVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 440
M + D +Y+ +IN C+ +++ A+ L++ M KGI+PD V YNTL G
Sbjct: 810 ITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCV 869
Query: 441 IHQVERAFKLFDEMRRDGVAADTWTYRT 468
++ +A +L +EM R G+ + T RT
Sbjct: 870 AGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 133/488 (27%), Positives = 204/488 (41%), Gaps = 112/488 (22%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA +FD M + P V+ ++IL + DT LS + TGL +Y YN
Sbjct: 384 HEAELLFDRMGKIGLRPNDVT-YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
LIN CK G +S + ++ P VT+ SL+ G C++ +I +A L+ ++ G
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
P++ T++TL++GL R G A+ LF EMA N +PN VTY +I+G C+EG
Sbjct: 503 IAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN------VKPNRVTYNVMIEGYCEEG 556
Query: 268 FVDKAKELFLKMKDENINP-----------------------------------NVVTYN 292
+ KA E +M ++ I P N + Y
Sbjct: 557 DMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYT 616
Query: 293 SLIHGFCYANDWNEAKC-----------------------------------LLIEMMDQ 317
L+HGFC EA LL EM D+
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 318 GVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 377
G++P+ V + ++D K G EA + DLMI G PN Y +++G C G VN A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 378 KELFVSME---------SNRCMHDVFS--------------------------YSILING 402
+ L M+ + C D+ + Y++LI G
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 403 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAAD 462
+C+ IE A L + M+ G+ PD + Y T+ L + V++A +L++ M G+ D
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 463 TWTYRTFI 470
Y T I
Sbjct: 857 RVAYNTLI 864
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 211 bits (538), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 191/364 (52%), Gaps = 6/364 (1%)
Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLG 166
+S+FN L L K L ++ G+ P+L+TYN+ I C+ G + ++G
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275
Query: 167 RILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTG 226
++ PD +T+N+LI GLC S+ EA K+ G EP+ TY+TLI G C+ G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 227 HTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 286
+A + + A NG + P+ TY ++IDGLC EG ++A LF + + I P
Sbjct: 336 MVQLAERIVGD-AVFNGFV-----PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKP 389
Query: 287 NVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 346
NV+ YN+LI G EA L EM ++G+ P V TFN++++ LCK G + +A L+
Sbjct: 390 NVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 347 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKN 406
+MI G P+ F +N L+ G+ ++ A E+ M N DV++Y+ L+NG CK
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 407 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTY 466
+ E + Y M+ KG P++ +N L L +++ A L +EM+ V D T+
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 467 RTFI 470
T I
Sbjct: 570 GTLI 573
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 191/375 (50%), Gaps = 8/375 (2%)
Query: 97 MLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 156
++ P P ++ N+++G L KN + ++ + GL PD YTYN LI +CK G
Sbjct: 277 LIEQGPKPDVITYNNLIYG-LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 157 RVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYS 216
V ++G + + F PD T+ SLI GLC E A ALF + G +PNVI Y+
Sbjct: 336 MVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYN 395
Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELF 276
TLI GL G + A L EM+ E G++ P T+ +++GLCK G V A L
Sbjct: 396 TLIKGLSNQGMILEAAQLANEMS----EKGLI--PEVQTFNILVNGLCKMGCVSDADGLV 449
Query: 277 LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKN 336
M + P++ T+N LIHG+ A +L M+D GV P+V T+N +++ LCK
Sbjct: 450 KVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKT 509
Query: 337 GKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSY 396
K ++ M++ G PN F +N L++ C +++ A L M++ D ++
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 397 SILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMR 455
LI+G+CKN +++GA +L+ +M + + YN + E V A KLF EM
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 456 RDGVAADTWTYRTFI 470
+ D +TYR +
Sbjct: 630 DRCLGPDGYTYRLMV 644
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 178/345 (51%), Gaps = 8/345 (2%)
Query: 127 LSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKG 186
+++F+R++ P +++YN +++ G V R+ TPD +F +K
Sbjct: 96 VNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKS 155
Query: 187 LCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEM-ANGNGEI 245
C SR A L + + GCE NV+ Y T++ G LF +M A+G
Sbjct: 156 FCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVS-- 213
Query: 246 GVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 305
+C T+ ++ LCK+G V + ++L K+ + PN+ TYN I G C + +
Sbjct: 214 --LC---LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD 268
Query: 306 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 365
A ++ +++QG +P+V+T+N ++ LCKN K EA L M+ G+ P+++ YNTL+
Sbjct: 269 GAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLI 328
Query: 366 DGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 425
G+C G V A+ + N + D F+Y LI+G C E AL+L++E L KGIK
Sbjct: 329 AGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIK 388
Query: 426 PDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
P+V++YNTL GL + A +L +EM G+ + T+ +
Sbjct: 389 PNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 196/422 (46%), Gaps = 50/422 (11%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
EA +F+ M + P V S+N + L + ++D ++ R+ G+ PD+Y++ I
Sbjct: 93 QEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 148 LINCFCKMGR-----------------------------------VSPGFVVLGRILRSC 172
+ FCK R + G+ + G++L S
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 173 FTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVAL 232
+ TFN L++ LC + + E L K+ G PN+ TY+ I GLC+ G A+
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 233 NLFEEMANGNGEIGVVCE----PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 288
+ +G + E P+ +TY +I GLCK +A+ KM +E + P+
Sbjct: 272 RM----------VGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 289 VTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 348
TYN+LI G+C A+ ++ + + G P+ T+ ++D LC G+ + A L +
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 349 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKE 408
+ G++PN +YNTL+ G G + A +L M + +V +++IL+NG CK
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 409 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRT 468
+ A L M+SKG PD+ +N L G ++E A ++ D M +GV D +TY +
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 469 FI 470
+
Sbjct: 502 LL 503
Score = 159 bits (401), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 169/343 (49%), Gaps = 8/343 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N A +F+ L + P V +N L L+ L ++ GL P++ T+NI
Sbjct: 373 NRALALFNEALG-KGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
L+N CKMG VS ++ ++ + PD TFN LI G + ++ A + + G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNG 491
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
+P+V TY++L+NGLC+T + ++ M C PN T+ +++ LC+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG------CAPNLFTFNILLESLCRYR 545
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQ-GVQPNVVTF 326
+D+A L +MK++++NP+ VT+ +LI GFC D + A L +M + V + T+
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605
Query: 327 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 386
N+I+ + + A +L M+ + P+ + Y ++DGFC TG VN + + M
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665
Query: 387 NRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 429
N + + + +IN C + A + M+ KG+ P+ V
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 139/298 (46%), Gaps = 44/298 (14%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V +FNIL L K L K + S G FPD++T+NILI+ + ++ +
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEI 483
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
L +L + PD T+NSL+ GLC S+ + + + GC PN+ T++ L+ LCR
Sbjct: 484 LDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCR 543
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMK---- 280
AL L EEM N + P+ VT+ T+IDG CK G +D A LF KM+
Sbjct: 544 YRKLDEALGLLEEMKNKS------VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 281 --------------------------------DENINPNVVTYNSLIHGFCYANDWNEAK 308
D + P+ TY ++ GFC + N
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 309 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMD 366
L+EMM+ G P++ T +++ LC ++ EA+ ++ M+Q G+ P A NT+ D
Sbjct: 658 KFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTICD 713
Score = 99.0 bits (245), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 140/317 (44%), Gaps = 49/317 (15%)
Query: 194 MEAAALFTKL-KAFGCEPNVITYSTLINGLCRTGH----TIVALNLFEEMANGNGEIGVV 248
M+A +F + K G + + TY ++I L G V +++ E + N E GV
Sbjct: 21 MKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLE-GV- 78
Query: 249 CEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 308
Y + ++G V +A +F +M + P V +YN+++ + +++A
Sbjct: 79 -------YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAH 131
Query: 309 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 368
+ + M D+G+ P+V +F + M CK + A RLL+ M G N Y T++ GF
Sbjct: 132 KVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191
Query: 369 -----------------------------------CLTGRVNRAKELFVSMESNRCMHDV 393
C G V ++L + + ++
Sbjct: 192 YEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 394 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 453
F+Y++ I G C+ E++GA+ + ++ +G KPDV+ YN L GL + + + A +
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 454 MRRDGVAADTWTYRTFI 470
M +G+ D++TY T I
Sbjct: 312 MVNEGLEPDSYTYNTLI 328
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 211 bits (537), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 128/379 (33%), Positives = 195/379 (51%), Gaps = 12/379 (3%)
Query: 93 IFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCF 152
+F ML+ R PP + +F ++ D+ LSL + + G P+ Y LI+
Sbjct: 204 VFYDMLS-RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSL 262
Query: 153 CKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNV 212
K RV+ +L + PDA TFN +I GLC RI EAA + ++ G P+
Sbjct: 263 SKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDD 322
Query: 213 ITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKA 272
ITY L+NGLC+ G A +LF + +P V + T+I G G +D A
Sbjct: 323 ITYGYLMNGLCKIGRVDAAKDLFYRIP----------KPEIVIFNTLIHGFVTHGRLDDA 372
Query: 273 KELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 331
K + M I P+V TYNSLI+G+ A +L +M ++G +PNV ++ +++D
Sbjct: 373 KAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVD 432
Query: 332 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMH 391
CK GK+DEA +L+ M G++PN +N L+ FC R+ A E+F M C
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKP 492
Query: 392 DVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 451
DV++++ LI+G C+ EI+ AL L +M+S+G+ + V YNTL +++ A KL
Sbjct: 493 DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLV 552
Query: 452 DEMRRDGVAADTWTYRTFI 470
+EM G D TY + I
Sbjct: 553 NEMVFQGSPLDEITYNSLI 571
Score = 207 bits (528), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 124/385 (32%), Positives = 203/385 (52%), Gaps = 14/385 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
NEA + + ML +R P ++ L L K D LF R+ P++ +N
Sbjct: 304 NEAAKMVNRML-IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNT 358
Query: 148 LINCFCKMGRVSPGFVVLGRILRS-CFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAF 206
LI+ F GR+ VL ++ S PD T+NSLI G E + A + ++
Sbjct: 359 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 207 GCEPNVITYSTLINGLCRTGHTIVALNLFEEM-ANGNGEIGVVCEPNTVTYTTIIDGLCK 265
GC+PNV +Y+ L++G C+ G A N+ EM A+G +PNTV + +I CK
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG-------LKPNTVGFNCLISAFCK 471
Query: 266 EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVT 325
E + +A E+F +M + P+V T+NSLI G C ++ A LL +M+ +GV N VT
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 326 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 385
+N +++ + G++ EA +L++ M+ G + YN+L+ G C G V++A+ LF M
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 386 SNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 445
+ S +ILING C++ +E A+ EM+ +G PD+V +N+L GL ++E
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 446 RAFKLFDEMRRDGVAADTWTYRTFI 470
+F +++ +G+ DT T+ T +
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 179 bits (455), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 190/373 (50%), Gaps = 6/373 (1%)
Query: 74 FKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
F + G +T ++A + M+ P V ++N L K L + +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 134 NSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRI 193
+ G P++Y+Y IL++ FCK+G++ + VL + P+ V FN LI C E RI
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 194 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNT 253
EA +F ++ GC+P+V T+++LI+GLC AL L +M + GVV NT
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NT 529
Query: 254 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIE 313
VTY T+I+ + G + +A++L +M + + +TYNSLI G C A + ++A+ L +
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 314 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 373
M+ G P+ ++ N++++ LC++G ++EA M+ G P+ +N+L++G C GR
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 374 VNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 433
+ +F +++ D +++ L++ CK + A L E + G P+ ++
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 434 LFIGLFEIHQVER 446
L + ++R
Sbjct: 710 LLQSIIPQETLDR 722
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 5/223 (2%)
Query: 249 CEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 308
CEP +Y +++ L A +F M I P + T+ ++ FC N+ + A
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 309 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 368
LL +M G PN V + ++ L K +++EA +LL+ M +G P+A +N ++ G
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 369 CLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 428
C R+N A ++ M D +Y L+NG CK ++ A L+ + KP++
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEI 353
Query: 429 VIYNTLFIGLFEIHQVERAFKLFDEMRRD-GVAADTWTYRTFI 470
VI+NTL G +++ A + +M G+ D TY + I
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396
Score = 82.0 bits (201), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 93/233 (39%), Gaps = 36/233 (15%)
Query: 255 TYTTIIDGLCKEGFVDKAKELFLKMKDENI------------------------------ 284
Y +I L G L ++MKDE I
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 285 ------NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 338
P +YN ++ N A + +M+ + + P + TF V+M C +
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 339 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSI 398
+D A LL M + G PN+ +Y TL+ RVN A +L M C+ D +++
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 399 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 451
+I G CK I A + + ML +G PD + Y L GL +I +V+ A LF
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF 345
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 290 TYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLM 349
Y LI ++ LLI+M D+G+ F IM + K G + +RL+ M
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM 172
Query: 350 IQI-GVRPNAFVYNTLMDGFCLTGRVNR-AKELFVSMESNRCMHDVFSYSILINGYCKNK 407
+ P YN +++ ++G ++ A +F M S + +F++ +++ +C
Sbjct: 173 RNVYSCEPTFKSYNVVLE-ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVN 231
Query: 408 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYR 467
EI+ ALSL +M G P+ VIY TL L + ++V A +L +EM G D T+
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 468 TFI 470
I
Sbjct: 292 DVI 294
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 181/366 (49%), Gaps = 6/366 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P S N L AK D V FK + G P ++TYNI+I+C CK G V +
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
+ PD VT+NS+I G R+ + F ++K CEP+VITY+ LIN C+
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
G + L + EM GNG +PN V+Y+T++D CKEG + +A + ++ M+ +
Sbjct: 345 FGKLPIGLEFYREM-KGNG-----LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGL 398
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
PN TY SLI C + ++A L EM+ GV+ NVVT+ ++D LC +M EA
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEE 458
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
L M GV PN YN L+ GF ++RA EL ++ D+ Y I G C
Sbjct: 459 LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLC 518
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTW 464
++IE A + +EM GIK + +IY TL F+ L DEM+ +
Sbjct: 519 SLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVV 578
Query: 465 TYRTFI 470
T+ I
Sbjct: 579 TFCVLI 584
Score = 205 bits (521), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 200/379 (52%), Gaps = 7/379 (1%)
Query: 93 IFDYMLNMR-PSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 151
+FD + + R P F+ LF L + + F ++ +FP + N L++
Sbjct: 177 VFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHR 236
Query: 152 FCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPN 211
F K+G+ ++ + P T+N +I +C E + A LF ++K G P+
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPD 296
Query: 212 VITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDK 271
+TY+++I+G + G + FEEM + + CEP+ +TY +I+ CK G +
Sbjct: 297 TVTYNSMIDGFGKVGRLDDTVCFFEEMKD------MCCEPDVITYNALINCFCKFGKLPI 350
Query: 272 AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 331
E + +MK + PNVV+Y++L+ FC +A ++M G+ PN T+ ++D
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 332 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMH 391
CK G + +A RL + M+Q+GV N Y L+DG C R+ A+ELF M++ +
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 392 DVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 451
++ SY+ LI+G+ K K ++ AL L +E+ +GIKPD+++Y T GL + ++E A +
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 452 DEMRRDGVAADTWTYRTFI 470
+EM+ G+ A++ Y T +
Sbjct: 531 NEMKECGIKANSLIYTTLM 549
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 203/398 (51%), Gaps = 30/398 (7%)
Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGF 162
+ P V ++NI+ C+ K + LF+ + GL PD TYN +I+ F K+GR+
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317
Query: 163 VVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGL 222
+ C PD +T+N+LI C ++ + ++K G +PNV++YSTL++
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Query: 223 CRTGHTIVALNLFEEM-----------------AN------------GNGEIGVVCEPNT 253
C+ G A+ + +M AN GN + V E N
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Query: 254 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIE 313
VTYT +IDGLC + +A+ELF KM + PN+ +YN+LIHGF A + + A LL E
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 314 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 373
+ +G++P+++ + + LC K++ A +++ M + G++ N+ +Y TLMD + +G
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 374 VNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYN 432
L M+ V ++ +LI+G CKNK + A+ ++ + + G++ + I+
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617
Query: 433 TLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ GL + +QVE A LF++M + G+ D Y + +
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Score = 171 bits (434), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 182/359 (50%), Gaps = 7/359 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V S++ L K + + + GL P+ YTY LI+ CK+G +S F +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
+L+ + VT+ +LI GLC R+ EA LF K+ G PN+ +Y+ LI+G +
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
+ AL L E+ G G +P+ + Y T I GLC ++ AK + +MK+ I
Sbjct: 485 AKNMDRALELLNEL-KGRG-----IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
N + Y +L+ + + + E LL EM + ++ VVTF V++D LCKN + +A
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 345 LLDLMI-QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGY 403
+ + G++ NA ++ ++DG C +V A LF M + D +Y+ L++G
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 404 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAAD 462
K + AL+L +M G+K D++ Y +L GL +Q+++A +EM +G+ D
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 42/283 (14%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P ++S+N L K K+ D L L L G+ PDL Y I C + ++ VV
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 165 LGRILRSCFTPDA-----------------------------------VTFNSLIKGLCA 189
+ + ++ VTF LI GLC
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 190 ESRIMEAAALFTKLK-AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVV 248
+ +A F ++ FG + N ++ +I+GLC+ A LFE+M + G+V
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV----QKGLV 645
Query: 249 CEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 308
P+ YT+++DG K+G V +A L KM + + +++ Y SL+ G + N +A+
Sbjct: 646 --PDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKAR 703
Query: 309 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 351
L EM+ +G+ P+ V ++ + + G +DEA L +++
Sbjct: 704 SFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMK 746
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 208 bits (529), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/373 (31%), Positives = 201/373 (53%), Gaps = 11/373 (2%)
Query: 100 MRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVS 159
M+ SP + +IL G L + + +D+V ++ + S GL PD++ Y +L C K G S
Sbjct: 158 MKCSPDSKACLSILNG-LVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYS 216
Query: 160 PGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLI 219
+L + P+ + I LC ++++ EA +F +K G PN+ TYS +I
Sbjct: 217 KKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMI 276
Query: 220 NGLCRTGHTIVALNLFEEMANGNGEIGVVCE--PNTVTYTTIIDGLCKEGFVDKAKELFL 277
+G C+TG+ A L++E+ +V E PN V + T++DG CK + A+ LF+
Sbjct: 277 DGYCKTGNVRQAYGLYKEI--------LVAELLPNVVVFGTLVDGFCKARELVTARSLFV 328
Query: 278 KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 337
M ++PN+ YN LIHG C + + EA LL EM + P+V T+ ++++ LC
Sbjct: 329 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 338 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYS 397
++ EA+RL M + P++ YN+L+ G+C + +A +L M ++ ++ ++S
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 398 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRD 457
LI+GYC ++I+ A+ LY EM KGI PDVV Y L F+ ++ A +L+ +M
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 458 GVAADTWTYRTFI 470
G+ + T+ +
Sbjct: 509 GIHPNDHTFACLV 521
Score = 197 bits (500), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/390 (29%), Positives = 189/390 (48%), Gaps = 41/390 (10%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V + I L ++ + +F+ + G+ P+LYTY+ +I+ +CK G V + +
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
IL + P+ V F +L+ G C ++ A +LF + FG +PN+ Y+ LI+G C+
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
+G+ + A+ L EM + N P+ TYT +I+GLC E V +A LF KMK+E I
Sbjct: 352 SGNMLEAVGLLSEMESLN------LSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 285 -----------------------------------NPNVVTYNSLIHGFCYANDWNEAKC 309
PN++T+++LI G+C D A
Sbjct: 406 FPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMG 465
Query: 310 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 369
L EM +G+ P+VVT+ ++D K M EA RL M++ G+ PN + L+DGF
Sbjct: 466 LYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFW 525
Query: 370 LTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 429
GR++ A + + R + ++ LI G C+N I A +S+M S GI PD+
Sbjct: 526 KEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDIC 585
Query: 430 IYNTLFIGLFEIHQVERAFKLFDEMRRDGV 459
Y ++ G + ++ L +M + G+
Sbjct: 586 SYVSMLKGHLQEKRITDTMMLQCDMIKTGI 615
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 154/365 (42%), Gaps = 76/365 (20%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V F L K + T SLF + G+ P+LY YN LI+ CK G + +
Sbjct: 302 PNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGL 361
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
L + +PD T+ LI GLC E ++ EA LF K+K P+ TY++LI+G C+
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
+ AL+L EM GV EPN +T++T+IDG C + A L+ +M + I
Sbjct: 422 EYNMEQALDLCSEMTAS----GV--EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDE------------ 332
P+VVTY +LI + EA L +M++ G+ PN TF ++D
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAID 535
Query: 333 -----------------------LCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 369
LC+NG + ASR M G+ P
Sbjct: 536 FYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP------------- 582
Query: 370 LTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 429
D+ SY ++ G+ + K I + L +M+ GI P+++
Sbjct: 583 ----------------------DICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620
Query: 430 IYNTL 434
+ L
Sbjct: 621 VNQLL 625
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 29/302 (9%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P + +N L K+ + + L + S L PD++TY ILIN C +V+ +
Sbjct: 337 PNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRL 396
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
++ P + T+NSLI G C E + +A L +++ A G EPN+IT+STLI+G C
Sbjct: 397 FQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCN 456
Query: 225 TGHTIVALNLFEEM----------------------ANGNGEIGVVCE-------PNTVT 255
A+ L+ EM AN + + + PN T
Sbjct: 457 VRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHT 516
Query: 256 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMM 315
+ ++DG KEG + A + + + + N V + LI G C A +M
Sbjct: 517 FACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMR 576
Query: 316 DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVN 375
G+ P++ ++ ++ + ++ + L MI+ G+ PN V L + G V
Sbjct: 577 SCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVK 636
Query: 376 RA 377
A
Sbjct: 637 SA 638
Score = 99.8 bits (247), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 121/254 (47%), Gaps = 7/254 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA +F M N R P +++N L K + + L L + ++G+ P++ T++ L
Sbjct: 392 EANRLFQKMKNERIFPSS-ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
I+ +C + + + + PD VT+ +LI E+ + EA L++ + G
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
PN T++ L++G + G VA++ ++E C N V +T +I+GLC+ G+
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS-----CW-NHVGFTCLIEGLCQNGY 564
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
+ +A F M+ I P++ +Y S++ G + L +M+ G+ PN++ +
Sbjct: 565 ILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQL 624
Query: 329 IMDELCKNGKMDEA 342
+ NG + A
Sbjct: 625 LARFYQANGYVKSA 638
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 206/401 (51%), Gaps = 42/401 (10%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P + FN L + + ++ S F N + + D+Y++ ILI C+ G + F +
Sbjct: 127 PGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGEIEKSFDL 185
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALF------------------------ 200
L + F+P+ V + +LI G C + I +A LF
Sbjct: 186 LIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK 245
Query: 201 -----------TKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC 249
K++ G PN+ TY+ ++N LC+ G T A +F+EM E GV C
Sbjct: 246 NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMR----ERGVSC 301
Query: 250 EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 309
N VTY T+I GLC+E +++A ++ +MK + INPN++TYN+LI GFC +A
Sbjct: 302 --NIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 310 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 369
L ++ +G+ P++VT+N+++ C+ G A++++ M + G++P+ Y L+D F
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419
Query: 370 LTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 429
+ + +A +L +SME + DV +YS+LI+G+C ++ A L+ M+ K +P+ V
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEV 479
Query: 430 IYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
IYNT+ +G + RA KL EM +A + +YR I
Sbjct: 480 IYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMI 520
Score = 196 bits (499), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 106/322 (32%), Positives = 175/322 (54%), Gaps = 6/322 (1%)
Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRI 168
++ +L L KN +++++ G+FP+LYTYN ++N CK GR F V +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 169 LRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHT 228
+ + VT+N+LI GLC E ++ EA + ++K+ G PN+ITY+TLI+G C G
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 229 IVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 288
AL+L ++ + P+ VTY ++ G C++G A ++ +M++ I P+
Sbjct: 355 GKALSLCRDLKSRG------LSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408
Query: 289 VTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 348
VTY LI F +++ +A L + M + G+ P+V T++V++ C G+M+EASRL
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 349 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKE 408
M++ PN +YNT++ G+C G RA +L ME +V SY +I CK ++
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 409 IEGALSLYSEMLSKGIKPDVVI 430
+ A L +M+ GI P I
Sbjct: 529 SKEAERLVEKMIDSGIDPSTSI 550
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 192/373 (51%), Gaps = 10/373 (2%)
Query: 94 FDYMLNMRP---SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILIN 150
FD ++ + SP V ++ GC K + + LF + GL + TY +LIN
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGE-IEKAKDLFFEMGKLGLVANERTYTVLIN 241
Query: 151 CFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEP 210
K G GF + ++ P+ T+N ++ LC + R +A +F +++ G
Sbjct: 242 GLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSC 301
Query: 211 NVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVD 270
N++TY+TLI GLCR A + ++M + PN +TY T+IDG C G +
Sbjct: 302 NIVTYNTLIGGLCREMKLNEANKVVDQMKSDG------INPNLITYNTLIDGFCGVGKLG 355
Query: 271 KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIM 330
KA L +K ++P++VTYN L+ GFC D + A ++ EM ++G++P+ VT+ +++
Sbjct: 356 KALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILI 415
Query: 331 DELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCM 390
D ++ M++A +L M ++G+ P+ Y+ L+ GFC+ G++N A LF SM C
Sbjct: 416 DTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCE 475
Query: 391 HDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 450
+ Y+ +I GYCK AL L EM K + P+V Y + L + + + A +L
Sbjct: 476 PNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Query: 451 FDEMRRDGVAADT 463
++M G+ T
Sbjct: 536 VEKMIDSGIDPST 548
Score = 185 bits (470), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 179/360 (49%), Gaps = 40/360 (11%)
Query: 145 YNILINCFCKMGRVSPGFVVLGRILRSCFTP----------------------------- 175
Y ++IN + + ++ ++ + F P
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 176 -----DAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIV 230
D +F LIKG C I ++ L +L FG PNV+ Y+TLI+G C+ G
Sbjct: 157 SKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEK 216
Query: 231 ALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 290
A +LF EM G++G+V N TYT +I+GL K G + E++ KM+++ + PN+ T
Sbjct: 217 AKDLFFEM----GKLGLV--ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 291 YNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 350
YN +++ C +A + EM ++GV N+VT+N ++ LC+ K++EA++++D M
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 351 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIE 410
G+ PN YNTL+DGFC G++ +A L ++S + +Y+IL++G+C+ +
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTS 390
Query: 411 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
GA + EM +GIKP V Y L +E+A +L M G+ D TY I
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLI 450
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 34/246 (13%)
Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQG 318
+I G F + L + E Y +I+ + + N + EM+D G
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124
Query: 319 VQP----------------------------------NVVTFNVIMDELCKNGKMDEASR 344
P +V +F +++ C+ G+++++
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
LL + + G PN +Y TL+DG C G + +AK+LF M + + +Y++LING
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTW 464
KN + +Y +M G+ P++ YN + L + + + AF++FDEMR GV+ +
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 465 TYRTFI 470
TY T I
Sbjct: 305 TYNTLI 310
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 205 bits (522), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 191/366 (52%), Gaps = 7/366 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P + ++ +L L ++ L ++ GL P++ TYN LIN +CK G + V
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
+ + +P+ T+N LIKG C +S + +A + K+ P+V+TY++LI+G CR
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
+G+ A L M N G + P+ TYT++ID LCK V++A +LF ++ + +
Sbjct: 475 SGNFDSAYRLLSLM-NDRGLV-----PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
NPNVV Y +LI G+C A +EA +L +M+ + PN +TFN ++ LC +GK+ EA+
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL 588
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
L + M++IG++P L+ G + A F M S+ D +Y+ I YC
Sbjct: 589 LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTW 464
+ + A + ++M G+ PD+ Y++L G ++ Q AF + MR G
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQH 708
Query: 465 TYRTFI 470
T+ + I
Sbjct: 709 TFLSLI 714
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 116/350 (33%), Positives = 180/350 (51%), Gaps = 12/350 (3%)
Query: 126 VLSLFKRLNSTGLFPDLYT-----YNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTF 180
VL L +++N F Y YN L+N + G V V +L P+ T+
Sbjct: 162 VLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTY 221
Query: 181 NSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMAN 240
N ++ G C + EA +K+ G +P+ TY++LI G C+ A +F EM
Sbjct: 222 NKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPL 281
Query: 241 GNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY 300
C N V YT +I GLC +D+A +LF+KMKD+ P V TY LI C
Sbjct: 282 KG------CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 301 ANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFV 360
+ +EA L+ EM + G++PN+ T+ V++D LC K ++A LL M++ G+ PN
Sbjct: 336 SERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVIT 395
Query: 361 YNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEML 420
YN L++G+C G + A ++ MES + + +Y+ LI GYCK+ + A+ + ++ML
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKML 454
Query: 421 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ + PDVV YN+L G + A++L M G+ D WTY + I
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 188/364 (51%), Gaps = 7/364 (1%)
Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLG 166
+ +N L LA+ D + ++ + + P++YTYN ++N +CK+G V +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 167 RILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTG 226
+I+ + PD T+ SLI G C + A +F ++ GC N + Y+ LI+GLC
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 227 HTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 286
A++LF +M + C P TYT +I LC +A L +M++ I P
Sbjct: 303 RIDEAMDLFVKMKDDE------CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKP 356
Query: 287 NVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 346
N+ TY LI C + +A+ LL +M+++G+ PNV+T+N +++ CK G +++A ++
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 347 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKN 406
+LM + PN YN L+ G+C V++A + M + + DV +Y+ LI+G C++
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRS 475
Query: 407 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTY 466
+ A L S M +G+ PD Y ++ L + +VE A LFD + + GV + Y
Sbjct: 476 GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMY 535
Query: 467 RTFI 470
I
Sbjct: 536 TALI 539
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 205/436 (47%), Gaps = 77/436 (17%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P + ++N + K + + ++ GL PD +TY LI +C+ + F V
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 165 LGRI-LRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLC 223
+ L+ C + V + LI GLC RI EA LF K+K C P V TY+ LI LC
Sbjct: 276 FNEMPLKGC-RRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334
Query: 224 RTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 283
+ ALNL +EM E G+ +PN TYT +ID LC + +KA+EL +M ++
Sbjct: 335 GSERKSEALNLVKEME----ETGI--KPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 284 INPNVVTYNSLIHGFCY----------------------ANDWNE------------AKC 309
+ PNV+TYN+LI+G+C +NE A
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG 448
Query: 310 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 369
+L +M+++ V P+VVT+N ++D C++G D A RLL LM G+ P+ + Y +++D C
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 370 LTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 429
+ RV A +LF S+E +V Y+ LI+GYCK +++ A + +MLSK P+ +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 430 IYNTLFIGL-----------------------------FEIHQV------ERAFKLFDEM 454
+N L GL IH++ + A+ F +M
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 455 RRDGVAADTWTYRTFI 470
G D TY TFI
Sbjct: 629 LSSGTKPDAHTYTTFI 644
Score = 182 bits (463), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 166/337 (49%), Gaps = 7/337 (2%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V ++N L K + + + + + S L P+ TYN LI +CK V V
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGV 449
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
L ++L PD VT+NSLI G C A L + + G P+ TY+++I+ LC+
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
+ A +LF+ + + GV PN V YT +IDG CK G VD+A + KM +N
Sbjct: 510 SKRVEEACDLFDSLE----QKGV--NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
PN +T+N+LIHG C EA L +M+ G+QP V T +++ L K+G D A
Sbjct: 564 LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYS 623
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
M+ G +P+A Y T + +C GR+ A+++ M N D+F+YS LI GY
Sbjct: 624 RFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYG 683
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 441
+ A + M G +P + +L L E+
Sbjct: 684 DLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/393 (28%), Positives = 191/393 (48%), Gaps = 25/393 (6%)
Query: 97 MLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG 156
++N R P ++ + L K+K + LF L G+ P++ Y LI+ +CK G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546
Query: 157 RVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYS 216
+V ++L ++L P+++TFN+LI GLCA+ ++ EA L K+ G +P V T +
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606
Query: 217 TLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELF 276
LI+ L + G A + F++M + +P+ TYTT I C+EG + A+++
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQMLSSG------TKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 277 LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD----- 331
KM++ ++P++ TY+SLI G+ N A +L M D G +P+ TF ++
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720
Query: 332 ----------ELCKNGKM---DEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 378
ELC M D LL+ M++ V PNA Y L+ G C G + A+
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780
Query: 379 ELFVSMESNRCMH-DVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 437
++F M+ N + ++ L++ CK K+ A + +M+ G P + L G
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840
Query: 438 LFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
L++ + ER +F + + G D ++ I
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIII 873
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 166/369 (44%), Gaps = 26/369 (7%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA + + ML+ P ++ ++ G A K + L L +++ GL P + T I
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATL-LEEKMVKIGLQPTVSTDTI 607
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ K G + ++L S PDA T+ + I+ C E R+++A + K++ G
Sbjct: 608 LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
P++ TYS+LI G G T A ++ + M + CEP+ T+ ++I L +
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG------CEPSQHTFLSLIKHLLEMK 721
Query: 268 F------------------VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 309
+ D EL KM + ++ PN +Y LI G C + A+
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK 781
Query: 310 LLIEMM-DQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 368
+ M ++G+ P+ + FN ++ CK K +EA++++D MI +G P L+ G
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 369 CLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 428
G R +F ++ D ++ I+I+G K +E L++ M G K
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSS 901
Query: 429 VIYNTLFIG 437
Y+ L G
Sbjct: 902 QTYSLLIEG 910
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 185/377 (49%), Gaps = 12/377 (3%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P S+++ + L + LF+ + GL D+YTY I+++ FCK G +
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
+ TP+ VT+ +LI ++ A LF + + GC PN++TYS LI+G C+
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 225 TGHTIVALNLFEEMANGNGEIGVVC-----------EPNTVTYTTIIDGLCKEGFVDKAK 273
G A +FE M G+ ++ V PN VTY ++DG CK V++A+
Sbjct: 601 AGQVEKACQIFERMC-GSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 274 ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDEL 333
+L M E PN + Y++LI G C +EA+ + EM + G + T++ ++D
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 334 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDV 393
K + D AS++L M++ PN +Y ++DG C G+ + A +L ME C +V
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 394 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 453
+Y+ +I+G+ +IE L L M SKG+ P+ V Y L + ++ A L +E
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 454 MRRDGVAADTWTYRTFI 470
M++ T YR I
Sbjct: 840 MKQTHWPTHTAGYRKVI 856
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/432 (29%), Positives = 189/432 (43%), Gaps = 65/432 (15%)
Query: 97 MLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI------- 149
M+ M P FN L + + L K++ G P YNILI
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
Query: 150 ----------------------------------NCFCKMGRVSPGFVVLGRILRSCFTP 175
C C G+ F V+ ++ F P
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481
Query: 176 DAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLF 235
D T++ ++ LC S++ A LF ++K G +V TY+ +++ C+ G A F
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 236 EEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI 295
EM E+G C PN VTYT +I K V A ELF M E PN+VTY++LI
Sbjct: 542 NEMR----EVG--CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALI 595
Query: 296 HGFCYANDWNEAKCLLIEMM-----------------DQGVQPNVVTFNVIMDELCKNGK 338
G C A +A C + E M D +PNVVT+ ++D CK+ +
Sbjct: 596 DGHCKAGQVEKA-CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654
Query: 339 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSI 398
++EA +LLD M G PN VY+ L+DG C G+++ A+E+ M + +++YS
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSS 714
Query: 399 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDG 458
LI+ Y K K + A + S+ML P+VVIY + GL ++ + + A+KL M G
Sbjct: 715 LIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKG 774
Query: 459 VAADTWTYRTFI 470
+ TY I
Sbjct: 775 CQPNVVTYTAMI 786
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 181/413 (43%), Gaps = 49/413 (11%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V ++ L K K LF+ + S G P++ TY+ LI+ CK G+V +
Sbjct: 551 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 610
Query: 165 LGRILRSCFTPDA----------------VTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
R+ S PD VT+ +L+ G C R+ EA L + GC
Sbjct: 611 FERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGC 670
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVV-------------------- 248
EPN I Y LI+GLC+ G A + EM+ +
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 249 ---------CEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC 299
C PN V YT +IDGLCK G D+A +L M+++ PNVVTY ++I GF
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 300 YANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAF 359
LL M +GV PN VT+ V++D CKNG +D A LL+ M Q +
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 360 VYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEM 419
Y +++GF + L + + + Y +LI+ K + +E AL L E+
Sbjct: 851 GYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Query: 420 --LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
S + YN+L L ++VE AF+LF EM + GV + ++ + I
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 173/391 (44%), Gaps = 50/391 (12%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P S++N L K D+ + + ++ L D +T CK+G+ +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL 292
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLING--- 221
+ F PD V + LI GLC S EA +++A C PNV+TYSTL+ G
Sbjct: 293 ---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349
Query: 222 --------------------------------LCRTGHTIVALNLFEEMANGNGEIGVVC 249
C +G A L ++M G +
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC-GHM---- 404
Query: 250 EPNTVTYTTIIDGLCKE------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 303
P V Y +I +C + +D A++ + +M + N + +S C A
Sbjct: 405 -PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK 463
Query: 304 WNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNT 363
+ +A ++ EM+ QG P+ T++ +++ LC KM+ A L + M + G+ + + Y
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 364 LMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKG 423
++D FC G + +A++ F M C +V +Y+ LI+ Y K K++ A L+ MLS+G
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 424 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 454
P++V Y+ L G + QVE+A ++F+ M
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERM 614
Score = 146 bits (369), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 178/388 (45%), Gaps = 28/388 (7%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFC----KMGRVSP 160
P + L L + ++ + R+ +T P++ TY+ L+ C C ++GR
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL-CGCLNKKQLGRCKR 358
Query: 161 GFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLIN 220
++ ++ C+ P FNSL+ C A L K+ G P + Y+ LI
Sbjct: 359 VLNMM--MMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG 415
Query: 221 GLCRTGHTIVA--LNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLK 278
+C ++ L+L E+ + GVV N + ++ LC G +KA + +
Sbjct: 416 SICGDKDSLNCDLLDLAEKAYSEMLAAGVVL--NKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 279 MKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGK 338
M + P+ TY+ +++ C A+ A L EM G+ +V T+ +++D CK G
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 339 MDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSI 398
+++A + + M ++G PN Y L+ + +V+ A ELF +M S C+ ++ +YS
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 399 LINGYCKNKEIEGALSLYSEML-SKGI---------------KPDVVIYNTLFIGLFEIH 442
LI+G+CK ++E A ++ M SK + +P+VV Y L G + H
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 443 QVERAFKLFDEMRRDGVAADTWTYRTFI 470
+VE A KL D M +G + Y I
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALI 681
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 155/329 (47%), Gaps = 11/329 (3%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + D M +M P ++ L L K D + ++ G LYTY+ L
Sbjct: 657 EARKLLDAM-SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
I+ + K+ R VL ++L + P+ V + +I GLC + EA L ++ GC
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGC 775
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
+PNV+TY+ +I+G G L L E M G GV PN VTY +ID CK G
Sbjct: 776 QPNVVTYTAMIDGFGMIGKIETCLELLERM----GSKGVA--PNYVTYRVLIDHCCKNGA 829
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
+D A L +MK + + Y +I GF ++ E+ LL E+ P + + +
Sbjct: 830 LDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRL 887
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNAF--VYNTLMDGFCLTGRVNRAKELFVSMES 386
++D L K +++ A RLL+ + + YN+L++ CL +V A +LF M
Sbjct: 888 LIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK 947
Query: 387 NRCMHDVFSYSILINGYCKNKEIEGALSL 415
+ ++ S+ LI G +N +I AL L
Sbjct: 948 KGVIPEMQSFCSLIKGLFRNSKISEALLL 976
Score = 129 bits (325), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 150/331 (45%), Gaps = 15/331 (4%)
Query: 146 NILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKA 205
N+L+ C+ G S LGR+ F P T+N LI+ R+ A+ + ++
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSL 263
Query: 206 FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCK 265
+ T LC+ G AL L E E V P+TV YT +I GLC+
Sbjct: 264 ANLRMDGFTLRCFAYSLCKVGKWREALTLVET------ENFV---PDTVFYTKLISGLCE 314
Query: 266 EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVT 325
++A + +M+ + PNVVTY++L+ G K +L MM +G P+
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374
Query: 326 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAKE 379
FN ++ C +G A +LL M++ G P VYN L+ C ++ A++
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 380 LFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 439
+ M + + + + S C + E A S+ EM+ +G PD Y+ + L
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 440 EIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
++E AF LF+EM+R G+ AD +TY +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMV 525
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 8/234 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
+EA+ + M+ + P V ++ + +T L L +R+ S G+ P+ TY +
Sbjct: 761 DEAYKLMQ-MMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
LI+ CK G + +L + ++ + + +I+G E +E+ L ++
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE--FIESLGLLDEIGQDD 877
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
P + Y LI+ L + +AL L EE+A + + + TY ++I+ LC
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL----VDYSSTYNSLIESLCLAN 933
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQP 321
V+ A +LF +M + + P + ++ SLI G + +EA LL++ + V P
Sbjct: 934 KVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA-LLLLDFISHMVCP 986
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Query: 351 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFS--YSILINGYCKNKE 408
QIG + A VYN L+D +E + + +VF ++L+ +C+N
Sbjct: 158 QIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDD--KEVFGEFLNVLVRKHCRNGS 215
Query: 409 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRT 468
AL + +P YN L + +++ A + EM + D +T R
Sbjct: 216 FSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRC 275
Query: 469 F 469
F
Sbjct: 276 F 276
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 198 bits (504), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 185/364 (50%), Gaps = 8/364 (2%)
Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRI 168
++ IL K D + K + GL DL Y LI FC G + G + +
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 169 LRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHT 228
L +P A+T+N+LI+G C ++ EA+ +F + G PNV TY+ LI+GLC G T
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 229 IVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 288
AL L M + EPN VTY II+ LCK+G V A E+ MK P+
Sbjct: 334 KEALQLLNLMIEKDE------EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDN 387
Query: 289 VTYNSLIHGFCYANDWNEAKCLLIEMMDQG--VQPNVVTFNVIMDELCKNGKMDEASRLL 346
+TYN L+ G C D +EA LL M+ P+V+++N ++ LCK ++ +A +
Sbjct: 388 ITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIY 447
Query: 347 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKN 406
DL+++ + N L++ G VN+A EL+ + ++ + + +Y+ +I+G+CK
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 407 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTY 466
+ A L +M ++P V YN L L + +++A++LF+EM+RD D ++
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 467 RTFI 470
I
Sbjct: 568 NIMI 571
Score = 189 bits (481), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 190/384 (49%), Gaps = 11/384 (2%)
Query: 90 AFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILI 149
AF + ML R V + NIL L +N +SL + + L PD+++YN +I
Sbjct: 126 AFGVLALMLK-RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVI 184
Query: 150 NCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCE 209
FC+ + + + S + VT+ LI C ++ EA ++K G E
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 210 PNVITYSTLINGLCRTGHTIVALNLFEE-MANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
+++ Y++LI G C G LF+E + G+ P +TY T+I G CK G
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS-------PCAITYNTLIRGFCKLGQ 297
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
+ +A E+F M + + PNV TY LI G C EA LL M+++ +PN VT+N+
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSM--ES 386
I+++LCK+G + +A +++LM + RP+ YN L+ G C G ++ A +L M +S
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 387 NRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 446
+ DV SY+ LI+G CK + AL +Y ++ K D V N L + V +
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 447 AFKLFDEMRRDGVAADTWTYRTFI 470
A +L+ ++ + ++ TY I
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMI 501
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 179/352 (50%), Gaps = 6/352 (1%)
Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILR 170
N L L ++++++ S ++++ T F + + + L+ C+ +M + F VL +L+
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 171 SCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIV 230
F + N L+KGLC +A +L +++ P+V +Y+T+I G C
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 231 ALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 290
AL L EM G+G C + VT+ +ID CK G +D+A +MK + ++V
Sbjct: 196 ALELANEM-KGSG-----CSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 291 YNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMI 350
Y SLI GFC + + K L E++++G P +T+N ++ CK G++ EAS + + MI
Sbjct: 250 YTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
Query: 351 QIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIE 410
+ GVRPN + Y L+DG C G+ A +L M + +Y+I+IN CK+ +
Sbjct: 310 ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVA 369
Query: 411 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAAD 462
A+ + M + +PD + YN L GL ++ A KL M +D D
Sbjct: 370 DAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTD 421
Score = 182 bits (463), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 183/359 (50%), Gaps = 8/359 (2%)
Query: 109 SFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRI 168
S + L C + + + + G ++Y +NIL+ C+ +L +
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 169 LRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHT 228
R+ PD ++N++I+G C + +A L ++K GC +++T+ LI+ C+ G
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 229 IVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 288
A+ +EM +G+ E + V YT++I G C G +D+ K LF ++ + +P
Sbjct: 229 DEAMGFLKEMKF----MGL--EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCA 282
Query: 289 VTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDL 348
+TYN+LI GFC EA + M+++GV+PNV T+ ++D LC GK EA +LL+L
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 349 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKE 408
MI+ PNA YN +++ C G V A E+ M+ R D +Y+IL+ G C +
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 409 IEGALSLYSEML--SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWT 465
++ A L ML S PDV+ YN L GL + +++ +A ++D + A D T
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVT 461
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 180/349 (51%), Gaps = 9/349 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA IF++M+ R P V ++ L L L L + P+ TYNI+
Sbjct: 300 EASEIFEFMIE-RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNII 358
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAAL-FTKLKAFG 207
IN CK G V+ ++ + + PD +T+N L+ GLCA+ + EA+ L + LK
Sbjct: 359 INKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSS 418
Query: 208 -CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKE 266
+P+VI+Y+ LI+GLC+ AL++++ + G + VT +++ K
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA------GDRVTTNILLNSTLKA 472
Query: 267 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 326
G V+KA EL+ ++ D I N TY ++I GFC N AK LL +M +QP+V +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532
Query: 327 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 386
N ++ LCK G +D+A RL + M + P+ +N ++DG G + A+ L V M
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSR 592
Query: 387 NRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 435
D+F+YS LIN + K ++ A+S + +M+ G +PD I +++
Sbjct: 593 AGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 125 bits (315), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 161/324 (49%), Gaps = 34/324 (10%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA + + M+ P V+ +NI+ L K+ + + + + PD TYNIL
Sbjct: 335 EALQLLNLMIEKDEEPNAVT-YNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 149 INCFCKMGRVSPGFVVLGRILR-SCFT-PDAVTFNSLIKGLCAESRIMEAAALFTKLKAF 206
+ C G + +L +L+ S +T PD +++N+LI GLC E+R+ +A ++ L
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 207 GCEPNVITYSTLINGLCRTGHTIVALNLFEEMANG----------------------NGE 244
+ +T + L+N + G A+ L++++++ N
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 245 IGVVC-------EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 297
G++C +P+ Y ++ LCKEG +D+A LF +M+ +N P+VV++N +I G
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 298 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 357
A D A+ LL+ M G+ P++ T++ +++ K G +DEA D M+ G P+
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPD 633
Query: 358 AFVYNTLMDGFCLT-GRVNRAKEL 380
A + ++++ +C++ G ++ EL
Sbjct: 634 AHICDSVLK-YCISQGETDKLTEL 656
Score = 106 bits (265), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 6/267 (2%)
Query: 103 SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGF 162
+ P V S+N L L K L ++ L D T NIL+N K G V+
Sbjct: 420 TDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAM 479
Query: 163 VVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGL 222
+ +I S ++ T+ ++I G C + A L K++ +P+V Y+ L++ L
Sbjct: 480 ELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSL 539
Query: 223 CRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 282
C+ G A LFEEM N P+ V++ +IDG K G + A+ L + M
Sbjct: 540 CKEGSLDQAWRLFEEMQRDNNF------PDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 283 NINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEA 342
++P++ TY+ LI+ F +EA +M+D G +P+ + ++ G+ D+
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKL 653
Query: 343 SRLLDLMIQIGVRPNAFVYNTLMDGFC 369
+ L+ ++ + + + T+MD C
Sbjct: 654 TELVKKLVDKDIVLDKELTCTVMDYMC 680
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 101/195 (51%)
Query: 276 FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK 335
+ KM + + N V+ + L+ + A +L M+ +G NV N+++ LC+
Sbjct: 95 YRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCR 154
Query: 336 NGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFS 395
N + +A LL M + + P+ F YNT++ GFC + +A EL M+ + C + +
Sbjct: 155 NLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVT 214
Query: 396 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMR 455
+ ILI+ +CK +++ A+ EM G++ D+V+Y +L G + +++R LFDE+
Sbjct: 215 WGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVL 274
Query: 456 RDGVAADTWTYRTFI 470
G + TY T I
Sbjct: 275 ERGDSPCAITYNTLI 289
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 126/260 (48%), Gaps = 8/260 (3%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A I+D ++ + V++ NIL K + + L+K+++ + + + TY
Sbjct: 441 HQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTA 499
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG 207
+I+ FCK G ++ +L ++ S P +N L+ LC E + +A LF +++
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 208 CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEG 267
P+V++++ +I+G + G A +L M+ P+ TY+ +I+ K G
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG------LSPDLFTYSKLINRFLKLG 613
Query: 268 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFN 327
++D+A F KM D P+ +S++ + ++ L+ +++D+ + +
Sbjct: 614 YLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTC 673
Query: 328 VIMDELC-KNGKMDEASRLL 346
+MD +C + MD A RLL
Sbjct: 674 TVMDYMCNSSANMDLAKRLL 693
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 10/186 (5%)
Query: 100 MRPS--PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 157
MR S P V +N L L K D LF+ + FPD+ ++NI+I+ K G
Sbjct: 520 MRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 158 VSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYST 217
+ +L + R+ +PD T++ LI + EA + F K+ G EP+ +
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF-VDKAKELF 276
++ G T L +++ + + +V + T++D +C +D AK L
Sbjct: 640 VLKYCISQGETDKLTELVKKLVDKD----IVLDKELT--CTVMDYMCNSSANMDLAKRL- 692
Query: 277 LKMKDE 282
L++ D+
Sbjct: 693 LRVTDD 698
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 183/366 (50%), Gaps = 6/366 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P + ++N L + + L + G P +YTYN +IN CK G+ V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
+LRS +PD+ T+ SL+ C + ++E +F+ +++ P+++ +S++++ R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
+G+ AL F N E G++ P+ V YT +I G C++G + A L +M +
Sbjct: 388 SGNLDKALMYF----NSVKEAGLI--PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
+VVTYN+++HG C EA L EM ++ + P+ T +++D CK G + A
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
L M + +R + YNTL+DGF G ++ AKE++ M S + SYSIL+N C
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC 561
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTW 464
+ A ++ EM+SK IKP V+I N++ G ++M +G D
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 465 TYRTFI 470
+Y T I
Sbjct: 622 SYNTLI 627
Score = 183 bits (464), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/364 (28%), Positives = 183/364 (50%), Gaps = 8/364 (2%)
Query: 101 RPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSP 160
R P + F+ + ++ + D L F + GL PD Y ILI +C+ G +S
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428
Query: 161 GFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLIN 220
+ +L+ D VT+N+++ GLC + EA LF ++ P+ T + LI+
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488
Query: 221 GLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 280
G C+ G+ A+ LF++M + VV TY T++DG K G +D AKE++ M
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRIRLDVV------TYNTLLDGFGKVGDIDTAKEIWADMV 542
Query: 281 DENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMD 340
+ I P ++Y+ L++ C EA + EM+ + ++P V+ N ++ C++G
Sbjct: 543 SKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNAS 602
Query: 341 EASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNR--CMHDVFSYSI 398
+ L+ MI G P+ YNTL+ GF +++A L ME + + DVF+Y+
Sbjct: 603 DGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNS 662
Query: 399 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDG 458
+++G+C+ +++ A + +M+ +G+ PD Y + G + AF++ DEM + G
Sbjct: 663 ILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Query: 459 VAAD 462
+ D
Sbjct: 723 FSPD 726
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 188/383 (49%), Gaps = 41/383 (10%)
Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLG 166
+ + N L G L + + +++ ++ +G+ ++YT NI++N CK G++ L
Sbjct: 200 IDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLS 259
Query: 167 RILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTG 226
++ PD VT+N+LI ++ + EA L + G P V TY+T+INGLC+ G
Sbjct: 260 QVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHG 319
Query: 227 HTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 286
A +F EM P++ TY +++ CK+G V + +++F M+ ++ P
Sbjct: 320 KYERAKEVFAEMLRSG------LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 287 NVVTYNS-----------------------------------LIHGFCYANDWNEAKCLL 311
++V ++S LI G+C + A L
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 312 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 371
EM+ QG +VVT+N I+ LCK + EA +L + M + + P+++ L+DG C
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 372 GRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 431
G + A ELF M+ R DV +Y+ L++G+ K +I+ A ++++M+SK I P + Y
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 432 NTLFIGLFEIHQVERAFKLFDEM 454
+ L L + AF+++DEM
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEM 576
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 174/363 (47%), Gaps = 6/363 (1%)
Query: 108 SSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGR 167
S F++L + + F L S G + N LI ++G V + V
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 168 ILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGH 227
I RS + T N ++ LC + ++ + ++++ G P+++TY+TLI+ G
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 228 TIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPN 287
A L M G G P TY T+I+GLCK G ++AKE+F +M ++P+
Sbjct: 286 MEEAFELMNAMP-GKG-----FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 288 VVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLD 347
TY SL+ C D E + + +M + V P++V F+ +M ++G +D+A +
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 348 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNK 407
+ + G+ P+ +Y L+ G+C G ++ A L M C DV +Y+ +++G CK K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 408 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYR 467
+ A L++EM + + PD L G ++ ++ A +LF +M+ + D TY
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 468 TFI 470
T +
Sbjct: 520 TLL 522
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 177/376 (47%), Gaps = 60/376 (15%)
Query: 148 LINCFCKMGRVSPGFVVLGRILR------------------SCFTPDAVTFNSLIKGLCA 189
+I+ + GR+S L R++R +C + D+V F+ LI+
Sbjct: 119 MIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSV-FDLLIRTYVQ 177
Query: 190 ESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC 249
++ EA FT L++ G ++ + LI L R G +A +++E++ +G+
Sbjct: 178 ARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG--VGI-- 233
Query: 250 EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 309
N T +++ LCK+G ++K +++++ + P++VTYN+LI + EA
Sbjct: 234 --NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 310 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 369
L+ M +G P V T+N +++ LCK+GK + A + M++ G+ P++ Y +L+ C
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 370 LTGRVNRAKELFVSMESNRCMHDV--FS-------------------------------- 395
G V +++F M S + D+ FS
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 396 -YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 454
Y+ILI GYC+ I A++L +EML +G DVV YNT+ GL + + A KLF+EM
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 455 RRDGVAADTWTYRTFI 470
+ D++T I
Sbjct: 472 TERALFPDSYTLTILI 487
>sp|Q8S8P6|PP180_ARATH Pentatricopeptide repeat-containing protein At2g32630
OS=Arabidopsis thaliana GN=At2g32630 PE=3 SV=1
Length = 624
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 183/367 (49%), Gaps = 6/367 (1%)
Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFV 163
P ++N + K + + V + K + G+ + TY +L+ K G++S
Sbjct: 256 KPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315
Query: 164 VLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLC 223
+ + D + SLI C + + A LF +L G P+ TY LI+G+C
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC 375
Query: 224 RTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 283
+ G A L EM + I V + T+IDG C++G VD+A ++ M+ +
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNI------TQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Query: 284 INPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 343
+V T N++ F ++EAK L MM+ GV+ + V++ ++D CK G ++EA
Sbjct: 430 FQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAK 489
Query: 344 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGY 403
RL M GV+PNA YN ++ +C G++ A++L +ME+N D ++Y+ LI+G
Sbjct: 490 RLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGE 549
Query: 404 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADT 463
C ++ A+ L+SEM KG+ + V Y + GL + + + AF L+DEM+R G D
Sbjct: 550 CIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDN 609
Query: 464 WTYRTFI 470
Y I
Sbjct: 610 KVYTALI 616
Score = 126 bits (317), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 123/238 (51%), Gaps = 6/238 (2%)
Query: 232 LNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY 291
L +F M + +I V + T +++GLC+ G V+K+K+L + + I P TY
Sbjct: 209 LEIFRRMVDSGVKITVY------SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTY 262
Query: 292 NSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 351
N++I+ + D++ + +L M GV N VT+ ++M+ KNGKM +A +L D M +
Sbjct: 263 NTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRE 322
Query: 352 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEG 411
G+ + VY +L+ C G + RA LF + ++Y LI+G CK E+
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGA 382
Query: 412 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTF 469
A L +EM SKG+ V++NTL G V+ A ++D M + G AD +T T
Sbjct: 383 AEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 140/325 (43%), Gaps = 6/325 (1%)
Query: 146 NILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKA 205
+++ + G G V +++ + D + + RI +F ++
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 206 FGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCK 265
G + V + + ++ GLCR G + L +E + +P TY TII+ K
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKG------IKPEAYTYNTIINAYVK 271
Query: 266 EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVT 325
+ + + MK + + N VTY L+ ++A+ L EM ++G++ +V
Sbjct: 272 QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 326 FNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSME 385
+ ++ C+ G M A L D + + G+ P+++ Y L+DG C G + A+ L M+
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 386 SNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 445
S ++ LI+GYC+ ++ A +Y M KG + DV NT+ + + +
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 446 RAFKLFDEMRRDGVAADTWTYRTFI 470
A + M GV T +Y I
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLI 476
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 195 bits (496), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 109/367 (29%), Positives = 191/367 (52%), Gaps = 9/367 (2%)
Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFV 163
P V FNIL K + +F + L P + ++N LIN +CK+G + GF
Sbjct: 237 PLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFR 296
Query: 164 VLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLC 223
+ ++ +S PD T+++LI LC E+++ A LF ++ G PN + ++TLI+G
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 224 RTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 283
R G + +++M + +P+ V Y T+++G CK G + A+ + M
Sbjct: 357 RNGEIDLMKESYQKMLSKG------LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 284 INPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEAS 343
+ P+ +TY +LI GFC D A + EM G++ + V F+ ++ +CK G++ +A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAE 470
Query: 344 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGY 403
R L M++ G++P+ Y +MD FC G +L M+S+ + V +Y++L+NG
Sbjct: 471 RALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Query: 404 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADT 463
CK +++ A L ML+ G+ PD + YNTL G H+ + K + + G+ AD
Sbjct: 531 CKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGH---HRHANSSKRYIQKPEIGIVADL 587
Query: 464 WTYRTFI 470
+Y++ +
Sbjct: 588 ASYKSIV 594
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 179/346 (51%), Gaps = 6/346 (1%)
Query: 125 TVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLI 184
T+ + + G ++Y +NIL+N FCK G +S V I + P V+FN+LI
Sbjct: 223 TIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI 282
Query: 185 KGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGE 244
G C + E L +++ P+V TYS LIN LC+ A LF+EM +
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC----K 338
Query: 245 IGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 304
G++ PN V +TT+I G + G +D KE + KM + + P++V YN+L++GFC D
Sbjct: 339 RGLI--PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDL 396
Query: 305 NEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTL 364
A+ ++ M+ +G++P+ +T+ ++D C+ G ++ A + M Q G+ + ++ L
Sbjct: 397 VAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSAL 456
Query: 365 MDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 424
+ G C GRV A+ M D +Y+++++ +CK + + L EM S G
Sbjct: 457 VCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGH 516
Query: 425 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
P VV YN L GL ++ Q++ A L D M GV D TY T +
Sbjct: 517 VPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 182/371 (49%), Gaps = 21/371 (5%)
Query: 79 EGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGL 138
EG+I+ +A +FD + R P V SFN L K + D L ++ +
Sbjct: 253 EGNIS-----DAQKVFDE-ITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRT 306
Query: 139 FPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAA 198
PD++TY+ LIN CK ++ + + + P+ V F +LI G I
Sbjct: 307 RPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKE 366
Query: 199 LFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTT 258
+ K+ + G +P+++ Y+TL+NG C+ G + A N+ + G I P+ +TYTT
Sbjct: 367 SYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVD------GMIRRGLRPDKITYTT 420
Query: 259 IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQG 318
+IDG C+ G V+ A E+ +M I + V +++L+ G C +A+ L EM+ G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 319 VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAK 378
++P+ VT+ ++MD CK G +LL M G P+ YN L++G C G++ A
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 379 ELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 438
L +M + + D +Y+ L+ G+ ++ + Y + GI D+ Y ++
Sbjct: 541 MLLDAMLNIGVVPDDITYNTLLEGHHRHAN---SSKRYIQKPEIGIVADLASYKSI---- 593
Query: 439 FEIHQVERAFK 449
+++++RA K
Sbjct: 594 --VNELDRASK 602
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 194 bits (493), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 184/366 (50%), Gaps = 6/366 (1%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P V +N+L L K K + LF + + L P L TYN LI+ +CK G F V
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
R+ P +TFN+L+KGL + +A + ++K G P+ T+S L +G
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
AL ++E + ++ N T + +++ LCKEG ++KA+E+ + + +
Sbjct: 332 NEKAEAALGVYETAVDSGVKM------NAYTCSILLNALCKEGKIEKAEEILGREMAKGL 385
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
PN V YN++I G+C D A+ + M QG++P+ + +N ++ C+ G+M+ A +
Sbjct: 386 VPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEK 445
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
++ M GV P+ YN L+ G+ ++ ++ ME N M +V SY LIN C
Sbjct: 446 EVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLC 505
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTW 464
K ++ A + +M +G+ P V IYN L G ++E AF+ EM + G+ +
Sbjct: 506 KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLV 565
Query: 465 TYRTFI 470
TY T I
Sbjct: 566 TYNTLI 571
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 185/367 (50%), Gaps = 8/367 (2%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P S +L L K K + +++F + + P + Y I K+ V G +
Sbjct: 142 PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLEL 201
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
R+ P +N LI GLC R+ +A LF ++ A P++ITY+TLI+G C+
Sbjct: 202 FNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCK 261
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
G+ + + E M + EP+ +T+ T++ GL K G V+ A+ + +MKD
Sbjct: 262 AGNPEKSFKVRERMKADH------IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIE-MMDQGVQPNVVTFNVIMDELCKNGKMDEAS 343
P+ T++ L G+ +N+ EA + E +D GV+ N T +++++ LCK GK+++A
Sbjct: 316 VPDAFTFSILFDGYS-SNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 344 RLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGY 403
+L + G+ PN +YNT++DG+C G + A+ +ME D +Y+ LI +
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 404 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADT 463
C+ E+E A ++M KG+ P V YN L G ++ ++ F + EM +G +
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 464 WTYRTFI 470
+Y T I
Sbjct: 495 VSYGTLI 501
Score = 176 bits (446), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/384 (29%), Positives = 186/384 (48%), Gaps = 7/384 (1%)
Query: 87 PNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYN 146
P ++F + + M P + +FN L L K + ++ K + G PD +T++
Sbjct: 265 PEKSFKVRERM-KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFS 323
Query: 147 ILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAF 206
IL + + + V + S +A T + L+ LC E +I +A + + A
Sbjct: 324 ILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 207 GCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKE 266
G PN + Y+T+I+G CR G + A E M +P+ + Y +I C+
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG------MKPDHLAYNCLIRRFCEL 437
Query: 267 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 326
G ++ A++ KMK + ++P+V TYN LI G+ ++++ +L EM D G PNVV++
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 327 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 386
+++ LCK K+ EA + M GV P +YN L+DG C G++ A M
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 387 NRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 446
++ +Y+ LI+G ++ A L E+ KG+KPDV YN+L G V+R
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617
Query: 447 AFKLFDEMRRDGVAADTWTYRTFI 470
L++EM+R G+ TY I
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLI 641
Score = 172 bits (436), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 216/462 (46%), Gaps = 24/462 (5%)
Query: 16 SVSALRCNFSSSFPHTGKPTSSILENEPSYPNTTAKLKESLRLTVKD------RASLEKF 69
SVSA C S +P S + P+ P T + +LR+ ++ R L
Sbjct: 22 SVSACSCRRLFSASTDPEPESQPEQAPPTNPVTGDEKLRNLRVLLQQNRIETARGVLSSL 81
Query: 70 LRERFKSSGEGDITTI-TPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLS 128
LR D T +P E F F PS S+ +L L ++K
Sbjct: 82 LR--------SDSTPFASPKELFSAFSLS---SPSLKHDFSYLLLSVLLNESKMISEAAD 130
Query: 129 LFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLC 188
LF L + G++P + +L++ K + V IL S F P + I+
Sbjct: 131 LFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAV 190
Query: 189 AESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVV 248
S + + LF ++K P+V Y+ LI+GLC+ A LF+EM +
Sbjct: 191 KLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM------LARR 244
Query: 249 CEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 308
P+ +TY T+IDG CK G +K+ ++ +MK ++I P+++T+N+L+ G A +A+
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 309 CLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGF 368
+L EM D G P+ TF+++ D N K + A + + + GV+ NA+ + L++
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 369 CLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 428
C G++ +A+E+ + + + Y+ +I+GYC+ ++ GA M +G+KPD
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424
Query: 429 VIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ YN L E+ ++E A K ++M+ GV+ TY I
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 196/402 (48%), Gaps = 47/402 (11%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P +F+ILF + N+ + L +++ +G+ + YT +IL+N CK G++ +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRI---------MEAAAL---------------- 199
LGR + P+ V +N++I G C + + ME +
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCE 436
Query: 200 ----------FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC 249
K+K G P+V TY+ LI G R ++ +EM + NG +
Sbjct: 437 LGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED-NGTM---- 491
Query: 250 EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 309
PN V+Y T+I+ LCK + +A+ + M+D ++P V YN LI G C +A
Sbjct: 492 -PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 310 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 369
EM+ +G++ N+VT+N ++D L GK+ EA LL + + G++P+ F YN+L+ G+
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 370 LTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 429
G V R L+ M+ + + +Y +LI+ C + IE L+ EM +KPD++
Sbjct: 611 FAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLL 666
Query: 430 IYNTLFIGLFEIH-QVERAFKLFDEMRRDGVAADTWTYRTFI 470
+YN + + + +H +E+AF L +M + D TY + I
Sbjct: 667 VYNGV-LHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 170/357 (47%), Gaps = 10/357 (2%)
Query: 98 LNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGR 157
+ ++ P V ++NIL G + +D + K + G P++ +Y LINC CK +
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSK 509
Query: 158 VSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYST 217
+ +V + +P +N LI G C++ +I +A ++ G E N++TY+T
Sbjct: 510 LLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNT 569
Query: 218 LINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFL 277
LI+GL TG A +L E++ +P+ TY ++I G G V + L+
Sbjct: 570 LIDGLSMTGKLSEAEDLLLEISRKG------LKPDVFTYNSLISGYGFAGNVQRCIALYE 623
Query: 278 KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNG 337
+MK I P + TY+ LI C + L EM ++P+++ +N ++ +G
Sbjct: 624 EMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHG 679
Query: 338 KMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYS 397
M++A L MI+ + + YN+L+ G G++ + L M + + +Y+
Sbjct: 680 DMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 398 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 454
I++ G+C+ K+ A Y EM KG DV I N L GL E + + A + EM
Sbjct: 740 IIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 142 bits (359), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 164/331 (49%), Gaps = 10/331 (3%)
Query: 132 RLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAES 191
++ G+ P + TYNILI + + F +L + + P+ V++ +LI LC S
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGS 508
Query: 192 RIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEP 251
+++EA + ++ G P V Y+ LI+G C G A +EM E+
Sbjct: 509 KLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL------ 562
Query: 252 NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLL 311
N VTY T+IDGL G + +A++L L++ + + P+V TYNSLI G+ +A + L
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 312 IEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLT 371
EM G++P + T+++++ LC ++ RL ++ ++P+ VYN ++ + +
Sbjct: 623 EEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFG---EMSLKPDLLVYNGVLHCYAVH 678
Query: 372 GRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 431
G + +A L M D +Y+ LI G K ++ SL EM ++ ++P+ Y
Sbjct: 679 GDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Query: 432 NTLFIGLFEIHQVERAFKLFDEMRRDGVAAD 462
N + G E+ A+ + EM+ G D
Sbjct: 739 NIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
>sp|Q9SSR4|PPR77_ARATH Pentatricopeptide repeat-containing protein At1g52620
OS=Arabidopsis thaliana GN=At1g52620 PE=2 SV=1
Length = 819
Score = 192 bits (489), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 117/413 (28%), Positives = 202/413 (48%), Gaps = 31/413 (7%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
++A I+DY++ + S P V + N L L K++ ++ + G D Y+ I
Sbjct: 151 SKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCI 210
Query: 148 LINCFCKMGRVSPGF-VVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAF 206
L+ C G+V G ++ GR + C P+ V +N++I G C I A +F +LK
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCI-PNIVFYNTIIGGYCKLGDIENAYLVFKELKLK 269
Query: 207 GCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVV------------------ 248
G P + T+ T+ING C+ G + + L E+ + V
Sbjct: 270 GFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 249 -----------CEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 297
C+P+ TY +I+ LCKEG + A + + + PN ++Y LI
Sbjct: 330 AESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQA 389
Query: 298 FCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPN 357
+C + +++ A LL++M ++G +P++VT+ +++ L +G MD+A + +I GV P+
Sbjct: 390 YCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPD 449
Query: 358 AFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYS 417
A +YN LM G C TGR AK LF M + D + Y+ LI+G+ ++ + + A ++S
Sbjct: 450 AAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509
Query: 418 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ KG+K DVV +N + G ++ A + M + + D +TY T I
Sbjct: 510 LSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII 562
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 172/316 (54%), Gaps = 7/316 (2%)
Query: 140 PDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAAL 199
PD+ TYNILIN CK G+ L + P+ +++ LI+ C A+ L
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 200 FTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTI 259
++ GC+P+++TY LI+GL +GH A+N+ ++ + GV P+ Y +
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR----GV--SPDAAIYNML 456
Query: 260 IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGV 319
+ GLCK G AK LF +M D NI P+ Y +LI GF + D++EA+ + +++GV
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516
Query: 320 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 379
+ +VV N ++ C++G +DEA ++ M + + P+ F Y+T++DG+ + A +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIK 576
Query: 380 LFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 439
+F ME N+C +V +Y+ LING+C + + A + EM + + P+VV Y TL L
Sbjct: 577 IFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLA 636
Query: 440 -EIHQVERAFKLFDEM 454
E +E+A ++ M
Sbjct: 637 KESSTLEKAVYYWELM 652
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 183/401 (45%), Gaps = 41/401 (10%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMG-------- 156
P + +N + G K + +FK L G P L T+ +IN FCK G
Sbjct: 238 PNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRL 297
Query: 157 ---------RVSPGFV------------------VLGRILRSCFTPDAVTFNSLIKGLCA 189
RVS F+ +G I+ + PD T+N LI LC
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 190 ESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVC 249
E + A + G PN ++Y+ LI C++ +A L +MA E G C
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA----ERG--C 411
Query: 250 EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 309
+P+ VTY +I GL G +D A + +K+ D ++P+ YN L+ G C + AK
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 310 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 369
L EM+D+ + P+ + ++D ++G DEA ++ L ++ GV+ + +N ++ GFC
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 370 LTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 429
+G ++ A M + D F+YS +I+GY K +++ A+ ++ M KP+VV
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 430 IYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
Y +L G + A + F EM+ + + TY T I
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLI 632
Score = 145 bits (365), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 167/353 (47%), Gaps = 21/353 (5%)
Query: 101 RPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSP 160
R P + ++ IL L + H D +++ +L G+ PD YN+L++ CK GR P
Sbjct: 409 RGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468
Query: 161 GFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLIN 220
++ +L PDA + +LI G EA +F+ G + +V+ ++ +I
Sbjct: 469 AKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIK 528
Query: 221 GLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 280
G CR+G AL M N E V P+ TY+TIIDG K+ + A ++F M+
Sbjct: 529 GFCRSGMLDEALACMNRM---NEEHLV---PDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 281 DENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCK-NGKM 339
PNVVTY SLI+GFC D+ A+ EM + + PNVVT+ ++ L K + +
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 340 DEASRLLDLMIQIGVRPNAFVYNTLMDGFC--LTGRV-------NRAK-----ELFVSME 385
++A +LM+ PN +N L+ GF +G+V N + E F M+
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMK 702
Query: 386 SNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 438
S+ +Y+ + C + ++ A +M+ KG PD V + + G
Sbjct: 703 SDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 127/317 (40%), Gaps = 26/317 (8%)
Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLG 166
V N + ++ D L+ R+N L PD +TY+ +I+ + K ++ +
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 167 RILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTG 226
+ ++ P+ VT+ SLI G C + A F +++ PNV+TY+TLI L +
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 227 HTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 286
T+ + E+ N C PN VT+ ++ +GFV K L D + +
Sbjct: 640 STLEKAVYYWELMMTNK-----CVPNEVTFNCLL-----QGFVKKTSGKVLAEPDGSNHG 689
Query: 287 NVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 346
++ H M G + +N + LC +G + A
Sbjct: 690 QSSLFSEFFH----------------RMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQ 733
Query: 347 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKN 406
D M++ G P+ + ++ GFC+ G + + + + + YS ++ +
Sbjct: 734 DKMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDFCNLGEKGLEVAVRYSQVLEQHLPQ 793
Query: 407 KEIEGALSLYSEMLSKG 423
I A ++ M+ K
Sbjct: 794 PVICEASTILHAMVEKA 810
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 90/191 (47%), Gaps = 9/191 (4%)
Query: 279 MKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQ-----PNVVTFNVIMDEL 333
+++EN+ + ++H + + ++A +E+ D V+ P+V+ N ++ L
Sbjct: 125 LRNENVKLTHEALSHVLHAYAESGSLSKA----VEIYDYVVELYDSVPDVIACNSLLSLL 180
Query: 334 CKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDV 393
K+ ++ +A ++ D M G + + L+ G C G+V ++L C+ ++
Sbjct: 181 VKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNI 240
Query: 394 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 453
Y+ +I GYCK +IE A ++ E+ KG P + + T+ G + + +L E
Sbjct: 241 VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300
Query: 454 MRRDGVAADTW 464
++ G+ W
Sbjct: 301 VKERGLRVSVW 311
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 104/357 (29%), Positives = 188/357 (52%), Gaps = 2/357 (0%)
Query: 105 PPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVV 164
P +FN+L L + D LF + G P+ +T+ IL+ +CK G G +
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 165 LGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCR 224
L + P+ V +N+++ C E R ++ + K++ G P+++T+++ I+ LC+
Sbjct: 205 LNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCK 264
Query: 225 TGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 284
G + A +F +M E + PN++TY ++ G CK G ++ AK LF +++ +
Sbjct: 265 EGKVLDASRIFSDMELD--EYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDD 322
Query: 285 NPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASR 344
++ +YN + G + EA+ +L +M D+G+ P++ ++N++MD LCK G + +A
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 345 LLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYC 404
++ LM + GV P+A Y L+ G+C G+V+ AK L M N C+ + ++ +IL++
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 405 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAA 461
K I A L +M KG D V N + GL ++++A ++ MR G AA
Sbjct: 443 KMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAA 499
Score = 177 bits (448), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/383 (29%), Positives = 187/383 (48%), Gaps = 11/383 (2%)
Query: 88 NEAFCIFDYMLNMRP-SPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYN 146
++AF F + + P + P V +N+L K + + V L+K + G+ P YT+N
Sbjct: 92 DKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFN 151
Query: 147 ILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAF 206
+LI C V + + P+ TF L++G C + L +++F
Sbjct: 152 LLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESF 211
Query: 207 GCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKE 266
G PN + Y+T+++ CR G + + E+M E G+V P+ VT+ + I LCKE
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMR----EEGLV--PDIVTFNSRISALCKE 265
Query: 267 GFVDKAKELFLKMK-DENIN---PNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPN 322
G V A +F M+ DE + PN +TYN ++ GFC +AK L + + +
Sbjct: 266 GKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLAS 325
Query: 323 VVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFV 382
+ ++N+ + L ++GK EA +L M G+ P+ + YN LMDG C G ++ AK +
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 383 SMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 442
M+ N D +Y L++GYC +++ A SL EM+ P+ N L L+++
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445
Query: 443 QVERAFKLFDEMRRDGVAADTWT 465
++ A +L +M G DT T
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVT 468
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/326 (30%), Positives = 168/326 (51%), Gaps = 14/326 (4%)
Query: 148 LINCFCKMGRVSPGFVVLGRILRSCF---TPDAVTFNSLIKGLCAESRIMEAAALFTKLK 204
+++ F K + F +++RS F P +N L++ E R+ + L+ +
Sbjct: 81 VVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 205 AFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLC 264
G P T++ LI LC + A LF+EM C+PN T+ ++ G C
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG------CKPNEFTFGILVRGYC 193
Query: 265 KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVV 324
K G DK EL M+ + PN V YN+++ FC ++++ ++ +M ++G+ P++V
Sbjct: 194 KAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIV 253
Query: 325 TFNVIMDELCKNGKMDEASRL---LDLMIQIGV-RPNAFVYNTLMDGFCLTGRVNRAKEL 380
TFN + LCK GK+ +ASR+ ++L +G+ RPN+ YN ++ GFC G + AK L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 381 FVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 440
F S+ N + + SY+I + G ++ + A ++ +M KGI P + YN L GL +
Sbjct: 314 FESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK 373
Query: 441 IHQVERAFKLFDEMRRDGVAADTWTY 466
+ + A + M+R+GV D TY
Sbjct: 374 LGMLSDAKTIVGLMKRNGVCPDAVTY 399
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 195/443 (44%), Gaps = 88/443 (19%)
Query: 107 VSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLG 166
+ S+NI L ++ + ++ K++ G+ P +Y+YNIL++ CK+G +S ++G
Sbjct: 326 LQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG 385
Query: 167 RILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNV-------------- 212
+ R+ PDAVT+ L+ G C+ ++ A +L ++ C PN
Sbjct: 386 LMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMG 445
Query: 213 ---------------------ITYSTLINGLCRTGHTIVALNLFEEMAN---------GN 242
+T + +++GLC +G A+ + + M GN
Sbjct: 446 RISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGN 505
Query: 243 GEIGVV--------CEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 294
IG+V C P+ +TY+T+++GLCK G +AK LF +M E + P+ V YN
Sbjct: 506 SYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIF 565
Query: 295 IHGFCYA----------NDWNEAKC-------------------------LLIEMMDQGV 319
IH FC D + C L+ EM ++G+
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 320 QPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKE 379
PN+ T+N + LC+ K+++A+ LLD M+Q + PN F + L++ FC + A+E
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE 685
Query: 380 LFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 439
+F + S C YS++ N ++ A L +L +G + +Y L L
Sbjct: 686 VFETAVS-ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLC 744
Query: 440 EIHQVERAFKLFDEMRRDGVAAD 462
+ ++E A + +M G D
Sbjct: 745 KKDELEVASGILHKMIDRGYGFD 767
Score = 158 bits (399), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 179/404 (44%), Gaps = 67/404 (16%)
Query: 112 ILFGCLAKN----KHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGR 167
+ +GCL D SL + + P+ YT NIL++ KMGR+S +L +
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456
Query: 168 ILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFG-------------------- 207
+ + D VT N ++ GLC + +A + ++ G
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 208 ---CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLC 264
C P++ITYSTL+NGLC+ G A NLF EM +G +P++V Y I C
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM------MGEKLQPDSVAYNIFIHHFC 570
Query: 265 KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVV 324
K+G + A + M+ + + ++ TYNSLI G N E L+ EM ++G+ PN+
Sbjct: 571 KQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNIC 630
Query: 325 TFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVS- 383
T+N + LC+ K+++A+ LLD M+Q + PN F + L++ FC + A+E+F +
Sbjct: 631 TYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETA 690
Query: 384 ------------------------MESNRCMHDV---------FSYSILINGYCKNKEIE 410
+++ + V F Y L+ CK E+E
Sbjct: 691 VSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELE 750
Query: 411 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 454
A + +M+ +G D + GL ++ + A D+M
Sbjct: 751 VASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 115/225 (51%), Gaps = 4/225 (1%)
Query: 250 EPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 309
+P+ Y +++ KE V+ L+ M I P T+N LI C ++ + A+
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 310 LLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFC 369
L EM ++G +PN TF +++ CK G D+ LL+ M GV PN +YNT++ FC
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 370 LTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEM-LSKGI---K 425
GR + ++++ M + D+ +++ I+ CK ++ A ++S+M L + + +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 426 PDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
P+ + YN + G ++ +E A LF+ +R + A +Y ++
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWL 333
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 192 bits (488), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 196/397 (49%), Gaps = 31/397 (7%)
Query: 104 PPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFV 163
P + ++N + K + + L + S G+ D+ TYN+LI+ C+ R++ G++
Sbjct: 225 APTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYL 284
Query: 164 VLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLC 223
+L + + P+ VT+N+LI G E +++ A+ L ++ +FG PN +T++ LI+G
Sbjct: 285 LLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI 344
Query: 224 RTGHTIVALNLFEEM-ANG-----------------NGEIGV------------VCEPNT 253
G+ AL +F M A G N E + VC
Sbjct: 345 SEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVC-VGR 403
Query: 254 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIE 313
+TYT +IDGLCK GF+D+A L +M + I+P++VTY++LI+GFC + AK ++
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 314 MMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGR 373
+ G+ PN + ++ ++ C+ G + EA R+ + MI G + F +N L+ C G+
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Query: 374 VNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 433
V A+E M S+ + + S+ LINGY + E A S++ EM G P Y +
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 434 LFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
L GL + + A K + A DT Y T +
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 189/390 (48%), Gaps = 6/390 (1%)
Query: 81 DITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFP 140
+++ ++ +F M R S ++IL + L +F+ + G P
Sbjct: 97 ELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNP 156
Query: 141 DLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALF 200
+YT N ++ K G + L +L+ PD TFN LI LCAE +++ L
Sbjct: 157 SVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLM 216
Query: 201 TKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTII 260
K++ G P ++TY+T+++ C+ G A+ L + M + GV + + TY +I
Sbjct: 217 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK----GV--DADVCTYNMLI 270
Query: 261 DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQ 320
LC+ + K L M+ I+PN VTYN+LI+GF A LL EM+ G+
Sbjct: 271 HDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLS 330
Query: 321 PNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKEL 380
PN VTFN ++D G EA ++ +M G+ P+ Y L+DG C + A+
Sbjct: 331 PNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGF 390
Query: 381 FVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 440
++ M+ N +Y+ +I+G CKN ++ A+ L +EM GI PD+V Y+ L G +
Sbjct: 391 YMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK 450
Query: 441 IHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ + + A ++ + R G++ + Y T I
Sbjct: 451 VGRFKTAKEIVCRIYRVGLSPNGIIYSTLI 480
Score = 169 bits (428), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 111/401 (27%), Positives = 186/401 (46%), Gaps = 14/401 (3%)
Query: 74 FKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
F + +G I+ EA +F YM+ + P S+ +L L KN +D + R+
Sbjct: 336 FNALIDGHISEGNFKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 394
Query: 134 NSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRI 193
G+ TY +I+ CK G + V+L + + PD VT+++LI G C R
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 454
Query: 194 MEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNT 253
A + ++ G PN I YSTLI CR G A+ ++E M + E +T
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAM---------ILEGHT 505
Query: 254 ---VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 310
T+ ++ LCK G V +A+E M + I PN V+++ LI+G+ + + +A +
Sbjct: 506 RDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV 565
Query: 311 LIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCL 370
EM G P T+ ++ LCK G + EA + L + + + +YNTL+ C
Sbjct: 566 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625
Query: 371 TGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVV 429
+G + +A LF M + D ++Y+ LI+G C+ + A+ E ++G + P+ V
Sbjct: 626 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 685
Query: 430 IYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+Y G+F+ Q + ++M G D T I
Sbjct: 686 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMI 726
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 178/419 (42%), Gaps = 65/419 (15%)
Query: 117 LAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPD 176
L KN D + L ++ G+ PD+ TY+ LIN FCK+GR ++ RI R +P+
Sbjct: 413 LCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPN 472
Query: 177 AV-----------------------------------TFNSLIKGLCAESRIMEAAALFT 201
+ TFN L+ LC ++ EA
Sbjct: 473 GIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 532
Query: 202 KLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMAN------------------GNG 243
+ + G PN +++ LING +G + A ++F+EM G
Sbjct: 533 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 592
Query: 244 EI-----------GVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 292
+ V +TV Y T++ +CK G + KA LF +M +I P+ TY
Sbjct: 593 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 652
Query: 293 SLIHGFCYANDWNEAKCLLIEMMDQG-VQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQ 351
SLI G C A E +G V PN V + +D + K G+ + M
Sbjct: 653 SLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN 712
Query: 352 IGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEG 411
+G P+ N ++DG+ G++ + +L M + ++ +Y+IL++GY K K++
Sbjct: 713 LGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVST 772
Query: 412 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
+ LY ++ GI PD + ++L +G+ E + +E K+ GV D +T+ I
Sbjct: 773 SFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLI 831
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 181/382 (47%), Gaps = 15/382 (3%)
Query: 74 FKSSGEGDITTITPNEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRL 133
+ +SGEG +AF +FD M + P + ++L G L K H K L
Sbjct: 553 YGNSGEG-------LKAFSVFDEMTKVGHHPTFFTYGSLLKG-LCKGGHLREAEKFLKSL 604
Query: 134 NSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRI 193
++ D YN L+ CK G ++ + G +++ PD+ T+ SLI GLC + +
Sbjct: 605 HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT 664
Query: 194 MEAAALFTKLKAFG-CEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPN 252
+ A + +A G PN + Y+ ++G+ + G + E+M N + P+
Sbjct: 665 VIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDN------LGHTPD 718
Query: 253 TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLI 312
VT +IDG + G ++K +L +M ++N PN+ TYN L+HG+ D + + L
Sbjct: 719 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 778
Query: 313 EMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTG 372
++ G+ P+ +T + ++ +C++ ++ ++L I GV + + +N L+ C G
Sbjct: 779 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 838
Query: 373 RVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 432
+N A +L M S D + +++ +N + + + EM +GI P+ Y
Sbjct: 839 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 898
Query: 433 TLFIGLFEIHQVERAFKLFDEM 454
L GL + ++ AF + +EM
Sbjct: 899 GLINGLCRVGDIKTAFVVKEEM 920
Score = 135 bits (339), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 172/379 (45%), Gaps = 10/379 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
EA I++ M+ + +FN+L L K + + S G+ P+ +++ L
Sbjct: 491 EAIRIYEAMI-LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
IN + G F V + + P T+ SL+KGLC + EA L A
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
+ + Y+TL+ +C++G+ A++LF EM + P++ TYT++I GLC++G
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRS------ILPDSYTYTSLISGLCRKGK 663
Query: 269 VDKAKELFLKMKDE--NINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 326
A LF K + N+ PN V Y + G A W +M + G P++VT
Sbjct: 664 TVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTT 722
Query: 327 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 386
N ++D + GK+++ + LL M PN YN L+ G+ V+ + L+ S+
Sbjct: 723 NAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIIL 782
Query: 387 NRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 446
N + D + L+ G C++ +E L + + +G++ D +N L ++
Sbjct: 783 NGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINW 842
Query: 447 AFKLFDEMRRDGVAADTWT 465
AF L M G++ D T
Sbjct: 843 AFDLVKVMTSLGISLDKDT 861
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/324 (30%), Positives = 156/324 (48%), Gaps = 15/324 (4%)
Query: 140 PDLYTYNILINCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAAL 199
P+L TYNIL++ + K VS F++ I+ + PD +T +SL+ G+C ES ++E
Sbjct: 752 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC-ESNMLEIG-- 808
Query: 200 FTKLKAF---GCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTY 256
LKAF G E + T++ LI+ C G A +L + M + +G+ + +T
Sbjct: 809 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS----LGISLDKDTCD- 863
Query: 257 TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMD 316
++ L + +++ + +M + I+P Y LI+G C D A + EM+
Sbjct: 864 -AMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 922
Query: 317 QGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNR 376
+ P V + ++ L K GK DEA+ LL M+++ + P + TLM C G V
Sbjct: 923 HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 982
Query: 377 AKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 436
A EL V M + D+ SY++LI G C ++ A LY EM G + Y L
Sbjct: 983 ALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1042
Query: 437 GLFEIHQVERAFKLFDEMRRDGVA 460
GL E AF D + +D +A
Sbjct: 1043 GLL---ARETAFSGADIILKDLLA 1063
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/379 (30%), Positives = 193/379 (50%), Gaps = 8/379 (2%)
Query: 93 IFDYMLNMRPSPPPVSSFNIL-FGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINC 151
+FD M ++R P SS+ ++ GC K + L + G PD T +++
Sbjct: 204 VFDEM-SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTLILTA 261
Query: 152 FCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPN 211
C+ G V+ +++ F P+ + F SLI GLC + I +A + ++ G +PN
Sbjct: 262 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPN 321
Query: 212 VITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDK 271
V T++ LI+GLC+ G T A LF ++ + +PN TYT++I G CKE +++
Sbjct: 322 VYTHTALIDGLCKRGWTEKAFRLFLKLVRSD-----TYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 272 AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 331
A+ LF +MK++ + PNV TY +LI+G C A + A L+ M D+G PN+ T+N +D
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 332 ELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMH 391
LCK + EA LL+ G+ + Y L+ C +N+A F M
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496
Query: 392 DVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 451
D+ +ILI +C+ K+++ + L+ ++S G+ P Y ++ + ++ A K F
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 556
Query: 452 DEMRRDGVAADTWTYRTFI 470
M+R G D++TY + I
Sbjct: 557 HNMKRHGCVPDSFTYGSLI 575
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 175/345 (50%), Gaps = 9/345 (2%)
Query: 128 SLFKRLNSTGLFPDLYTYNIL-INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKG 186
++F ++ G+ PD +Y ++ I CF + G++ L +++ F PD T ++
Sbjct: 203 NVFDEMSVRGVVPDSSSYKLMVIGCF-RDGKIQEADRWLTGMIQRGFIPDNATCTLILTA 261
Query: 187 LCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIG 246
LC + A F K+ G +PN+I +++LI+GLC+ G A + EEM NG
Sbjct: 262 LCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR-NG--- 317
Query: 247 VVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWN 305
+PN T+T +IDGLCK G+ +KA LFLK+ + + PNV TY S+I G+C + N
Sbjct: 318 --WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLN 375
Query: 306 EAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLM 365
A+ L M +QG+ PNV T+ +++ CK G A L++LM G PN + YN +
Sbjct: 376 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAI 435
Query: 366 DGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 425
D C R A EL S D +Y+ILI CK +I AL+ + M G +
Sbjct: 436 DSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFE 495
Query: 426 PDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWTYRTFI 470
D+ + N L +++ + +LF + G+ TY + I
Sbjct: 496 ADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Score = 181 bits (458), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 174/348 (50%), Gaps = 8/348 (2%)
Query: 88 NEAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNI 147
N A F M+++ P ++ F L L K + + + G P++YT+
Sbjct: 269 NRAIWYFRKMIDLGFKPNLIN-FTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTA 327
Query: 148 LINCFCKMGRVSPGFVVLGRILRS-CFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAF 206
LI+ CK G F + +++RS + P+ T+ S+I G C E ++ A LF+++K
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 207 GCEPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKE 266
G PNV TY+TLING C+ G + E+ N G+ G + PN TY ID LCK+
Sbjct: 388 GLFPNVNTYTTLINGHCKAG----SFGRAYELMNLMGDEGFM--PNIYTYNAAIDSLCKK 441
Query: 267 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTF 326
+A EL K + + VTY LI C ND N+A M G + ++
Sbjct: 442 SRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLN 501
Query: 327 NVIMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMES 386
N+++ C+ KM E+ RL L++ +G+ P Y +++ +C G ++ A + F +M+
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 387 NRCMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 434
+ C+ D F+Y LI+G CK ++ A LY M+ +G+ P V TL
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 156/320 (48%), Gaps = 7/320 (2%)
Query: 152 FCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPN 211
F ++GR++ ++ + TP ++T N +++ I A +F ++ G P+
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216
Query: 212 VITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDK 271
+Y ++ G R G A + G + G + P+ T T I+ LC+ G V++
Sbjct: 217 SSSYKLMVIGCFRDGKIQEA----DRWLTGMIQRGFI--PDNATCTLILTALCENGLVNR 270
Query: 272 AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMD 331
A F KM D PN++ + SLI G C +A +L EM+ G +PNV T ++D
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 332 ELCKNGKMDEASRL-LDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCM 390
LCK G ++A RL L L+ +PN Y +++ G+C ++NRA+ LF M+
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 391 HDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 450
+V +Y+ LING+CK A L + M +G P++ YN L + + A++L
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 451 FDEMRRDGVAADTWTYRTFI 470
++ G+ AD TY I
Sbjct: 451 LNKAFSCGLEADGVTYTILI 470
Score = 120 bits (300), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 9/341 (2%)
Query: 89 EAFCIFDYMLNMRPSPPPVSSFNILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNIL 148
+AF +F ++ P V ++ + G K + LF R+ GLFP++ TY L
Sbjct: 340 KAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTL 399
Query: 149 INCFCKMGRVSPGFVVLGRILRSCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGC 208
IN CK G + ++ + F P+ T+N+ I LC +SR EA L K + G
Sbjct: 400 INGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Query: 209 EPNVITYSTLINGLCRTGHTIVALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGF 268
E + +TY+ LI C+ AL F M N G E + +I C++
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRM-NKTG-----FEADMRLNNILIAAFCRQKK 513
Query: 269 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNV 328
+ +++ LF + + P TY S+I +C D + A M G P+ T+
Sbjct: 514 MKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGS 573
Query: 329 IMDELCKNGKMDEASRLLDLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNR 388
++ LCK +DEA +L + MI G+ P TL +C A L ++
Sbjct: 574 LISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKL 633
Query: 389 CMHDVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 429
+ V L+ C K++ A + ++L K D V
Sbjct: 634 WIRTV---RTLVRKLCSEKKVGVAALFFQKLLEKDSSADRV 671
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 146/305 (47%), Gaps = 16/305 (5%)
Query: 182 SLIKGLCAESRIMEA------AALFTKLKAFGCEPNVITYSTLINGLCRTGHTIVALNL- 234
+++ L +ES M A A F K + F V S L NG + H ++ L
Sbjct: 96 TVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLR 155
Query: 235 -FEEMANGNGEIGVVCE-------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 286
F E+ N +G+V + P+++T +++ + G ++ A+ +F +M + P
Sbjct: 156 NFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVP 215
Query: 287 NVVTYNSLIHGFCYANDWNEAKCLLIEMMDQGVQPNVVTFNVIMDELCKNGKMDEASRLL 346
+ +Y ++ G EA L M+ +G P+ T +I+ LC+NG ++ A
Sbjct: 216 DSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYF 275
Query: 347 DLMIQIGVRPNAFVYNTLMDGFCLTGRVNRAKELFVSMESNRCMHDVFSYSILINGYCKN 406
MI +G +PN + +L+DG C G + +A E+ M N +V++++ LI+G CK
Sbjct: 276 RKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
Query: 407 KEIEGALSLYSEML-SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMRRDGVAADTWT 465
E A L+ +++ S KP+V Y ++ G + ++ RA LF M+ G+ + T
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 466 YRTFI 470
Y T I
Sbjct: 396 YTTLI 400
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 10/209 (4%)
Query: 111 NILFGCLAKNKHYDTVLSLFKRLNSTGLFPDLYTYNILINCFCKMGRVSPGFVVLGRILR 170
NIL + K LF+ + S GL P TY +I+C+CK G + + R
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 171 SCFTPDAVTFNSLIKGLCAESRIMEAAALFTKLKAFGCEPNVITYSTLINGLCRTGHTIV 230
PD+ T+ SLI GLC +S + EA L+ + G P +T TL C+ +
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSAN 621
Query: 231 ALNLFEEMANGNGEIGVVCEPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 290
A+ L E + + ++ + T T++ LC E V A F K+ +++ + + VT
Sbjct: 622 AMILLEPL---DKKLWI------RTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVT 672
Query: 291 YNSLIHGFCYANDWNEAKCLLIEMMDQGV 319
+ C + N L E + +GV
Sbjct: 673 LAAFTTA-CSESGKNNLVTDLTERISRGV 700
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,864,657
Number of Sequences: 539616
Number of extensions: 6877202
Number of successful extensions: 28049
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 16067
Number of HSP's gapped (non-prelim): 3124
length of query: 470
length of database: 191,569,459
effective HSP length: 121
effective length of query: 349
effective length of database: 126,275,923
effective search space: 44070297127
effective search space used: 44070297127
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)