BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036578
(70 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 4 DVYSFGILLLEMFIGKRPTDATFSEGL 30
D +SFG+LL EM IG+ P E L
Sbjct: 201 DWWSFGVLLYEMLIGQSPFHGQDEEEL 227
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 4 DVYSFGILLLEMFIGKRPTDATFSEGL 30
D +SFG+LL EM IG+ P E L
Sbjct: 200 DWWSFGVLLYEMLIGQSPFHGQDEEEL 226
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 28.9 bits (63), Expect = 0.73, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 4 DVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSP--LIEVMANNS 61
DVY+FGI+L E+ G+ P + + + +L + ++ P + +MA
Sbjct: 207 DVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECL 266
Query: 62 KIHKDKKP 69
K +D++P
Sbjct: 267 KKKRDERP 274
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 28.9 bits (63), Expect = 0.75, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 4 DVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSP--LIEVMANNS 61
DVY+FGI+L E+ G+ P + + + +L + ++ P + +MA
Sbjct: 195 DVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECL 254
Query: 62 KIHKDKKP 69
K +D++P
Sbjct: 255 KKKRDERP 262
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 28.9 bits (63), Expect = 0.79, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 4 DVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSP--LIEVMANNS 61
DVY+FGI+L E+ G+ P + + + +L + ++ P + +MA
Sbjct: 207 DVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECL 266
Query: 62 KIHKDKKP 69
K +D++P
Sbjct: 267 KKKRDERP 274
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 28.5 bits (62), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
D+YS GI+L EM +G+ P
Sbjct: 194 DIYSIGIVLYEMLVGEPP 211
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 28.5 bits (62), Expect = 1.0, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 4 DVYSFGILLLEMFIGKRPTDATFSEGLTV 32
DV+S G +L M G+ P D F +G +V
Sbjct: 228 DVWSLGCVLYAMMFGEGPYDMVFQKGDSV 256
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 28.5 bits (62), Expect = 1.1, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 197 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 249
Query: 61 SKI 63
++
Sbjct: 250 GRL 252
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 203 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 255
Query: 61 SKI 63
++
Sbjct: 256 GRL 258
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 28.1 bits (61), Expect = 1.1, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 199 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 251
Query: 61 SKI 63
++
Sbjct: 252 GRL 254
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 199 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 251
Query: 61 SKI 63
++
Sbjct: 252 GRL 254
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 201 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 253
Query: 61 SKI 63
++
Sbjct: 254 GRL 256
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 196 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 248
Query: 61 SKI 63
++
Sbjct: 249 GRL 251
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 28.1 bits (61), Expect = 1.2, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 214 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 266
Query: 61 SKI 63
++
Sbjct: 267 GRL 269
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 194 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 246
Query: 61 SKI 63
++
Sbjct: 247 GRL 249
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 195 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 247
Query: 61 SKI 63
++
Sbjct: 248 GRL 250
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 196 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 248
Query: 61 SKI 63
++
Sbjct: 249 GRL 251
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 202 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 254
Query: 61 SKI 63
++
Sbjct: 255 GRL 257
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 200 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 252
Query: 61 SKI 63
++
Sbjct: 253 GRL 255
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 196 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 248
Query: 61 SKI 63
++
Sbjct: 249 GRL 251
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 214 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 266
Query: 61 SKI 63
++
Sbjct: 267 GRL 269
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 227 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 279
Query: 61 SKI 63
++
Sbjct: 280 GRL 282
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 1 MTGDVYSFGILLLEMFIGKRPTDATFSEGLTVHEFAKMALLEKVMEIVDFSPLIEVMANN 60
+ DV+SFG++L E+F + + + EF +M +K +++ F LIE++ NN
Sbjct: 199 VASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFH-LIELLKNN 251
Query: 61 SKI 63
++
Sbjct: 252 GRL 254
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
DVY+FGI+L E+ G+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
DVY+FGI+L E+ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
DVY+FGI+L E+ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
DVY+FGI+L E+ G+ P
Sbjct: 219 DVYAFGIVLYELMTGQLP 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
DVY+FGI+L E+ G+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
DVY+FGI+L E+ G+ P
Sbjct: 193 DVYAFGIVLYELMTGQLP 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
DVY+FGI+L E+ G+ P
Sbjct: 218 DVYAFGIVLYELMTGQLP 235
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
DVY+FGI+L E+ G+ P
Sbjct: 211 DVYAFGIVLYELMTGQLP 228
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 27.3 bits (59), Expect = 2.3, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
DVY+FGI+L E+ G+ P
Sbjct: 196 DVYAFGIVLYELMTGQLP 213
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
DVY+FGI+L E+ G+ P
Sbjct: 191 DVYAFGIVLYELMTGQLP 208
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 26.9 bits (58), Expect = 2.6, Method: Composition-based stats.
Identities = 12/21 (57%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Query: 4 DVYSFGILLLEMF-IGKRPTD 23
DV++FGIL+ E+F +GK P D
Sbjct: 187 DVWAFGILMWEVFSLGKMPYD 207
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 26.9 bits (58), Expect = 2.9, Method: Composition-based stats.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 4 DVYSFGILLLEMFIGKRP 21
DVYS+GI+L E+ G+ P
Sbjct: 219 DVYSYGIVLYELMTGELP 236
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 4 DVYSFGILLLEMFIGKRPTD 23
DV+ +G++LLE+ G+R D
Sbjct: 217 DVFGYGVMLLELITGQRAFD 236
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 26.9 bits (58), Expect = 3.3, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 4 DVYSFGILLLEMFIGKRPTD 23
DV+ +G++LLE+ G+R D
Sbjct: 225 DVFGYGVMLLELITGQRAFD 244
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 4 DVYSFGILLLEMFIG 18
D+YSFG++LLE+ G
Sbjct: 216 DIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 4 DVYSFGILLLEMFIG 18
D+YSFG++LLE+ G
Sbjct: 216 DIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 4 DVYSFGILLLEMFIG 18
D+YSFG++LLE+ G
Sbjct: 210 DIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 26.2 bits (56), Expect = 4.3, Method: Composition-based stats.
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 4 DVYSFGILLLEMFIGKRPTD 23
D+YSFG++LLE+ G D
Sbjct: 207 DIYSFGVVLLEIITGLPAVD 226
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 25.8 bits (55), Expect = 6.6, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 15/23 (65%)
Query: 4 DVYSFGILLLEMFIGKRPTDATF 26
DV+S GI+L M +G+ P D F
Sbjct: 190 DVWSCGIVLYVMLVGRLPFDDEF 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,916,512
Number of Sequences: 62578
Number of extensions: 57724
Number of successful extensions: 457
Number of sequences better than 100.0: 46
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 432
Number of HSP's gapped (non-prelim): 46
length of query: 70
length of database: 14,973,337
effective HSP length: 40
effective length of query: 30
effective length of database: 12,470,217
effective search space: 374106510
effective search space used: 374106510
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)