BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036583
(817 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 242 bits (617), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 137/321 (42%), Positives = 199/321 (61%), Gaps = 17/321 (5%)
Query: 457 KRKAPES-----PQETSEEDNFLENLSGMPVRFTYRDLQTATNNFSVK--LGQGGFGSVY 509
+RK P+ P E E + G RF+ R+LQ A++NFS K LG+GGFG VY
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHL-----GQLKRFSLRELQVASDNFSNKNILGRGGFGKVY 55
Query: 510 QGVLPDGTRLAVKKL--EGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYE 567
+G L DGT +AVK+L E G+ +F+ EV +I H +L++LRGFC T RLL Y
Sbjct: 56 KGRLADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 115
Query: 568 FMANGSLDKWIFKKNQ-EFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLL 626
+MANGS+ + ++ + + LDW R IALG+A+GLAYLH+ CD +IIH D+K N+LL
Sbjct: 116 YMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL 175
Query: 627 DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLE 686
D+ + A V DFGLAKLM + HV +RGT G++APE+++ SEK+DV+ YG++LLE
Sbjct: 176 DEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLE 235
Query: 687 IIGGRKNFDPNETS--DKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALW 744
+I G++ FD + D + +++E KL ++D L + + + V ++VAL
Sbjct: 236 LITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALL 295
Query: 745 CVQEDMSLRPSMTKVVQMLEG 765
C Q RP M++VV+MLEG
Sbjct: 296 CTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 128/294 (43%), Positives = 187/294 (63%), Gaps = 7/294 (2%)
Query: 479 GMPVRFTYRDLQTATNNFSVK--LGQGGFGSVYQGVLPDGTRLAVKKL--EGIGQGKKEF 534
G RF+ R+LQ A++NF K LG+GGFG VY+G L DG +AVK+L E G+ +F
Sbjct: 15 GQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQF 74
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ-EFLLDWETRF 593
+ EV +I H +L++LRGFC T RLL Y +MANGS+ + ++ + + LDW R
Sbjct: 75 QTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQ 134
Query: 594 NIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT 653
IALG+A+GLAYLH+ CD +IIH D+K N+LLD+ + A V DFGLAKLM + HV
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA 194
Query: 654 LRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETS--DKAHFPSYAFK 711
+RG G++APE+++ SEK+DV+ YG++LLE+I G++ FD + D +
Sbjct: 195 VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254
Query: 712 MMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEG 765
+++E KL ++D L + + + V ++VAL C Q RP M++VV+MLEG
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 165/291 (56%), Gaps = 16/291 (5%)
Query: 483 RFTYRDLQTATNNFSVK--LGQGGFGSVYQGVLPDGTRLAVKK-LEGIGQGKKEFRAEVS 539
R DL+ ATNNF K +G G FG VY+GVL DG ++A+K+ QG +EF E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL-LDWETRFNIALG 598
+ H HLV L GFC E +L Y++M NG+L + ++ + + + WE R I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGT 657
A+GL YLH + IIH D+K N+LLD+N+ K++DFG++K T +Q+H+ ++GT
Sbjct: 148 AARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGK 717
GY+ PE+ ++EKSDVYS+G+VL E++ R + + + +A + G+
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 718 LRNILDSRL--NIDEQSDRVF--TAVKVALWCVQEDMSLRPSMTKVVQMLE 764
L I+D L I +S R F TAVK C+ RPSM V+ LE
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVK----CLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 164/291 (56%), Gaps = 16/291 (5%)
Query: 483 RFTYRDLQTATNNFSVK--LGQGGFGSVYQGVLPDGTRLAVKK-LEGIGQGKKEFRAEVS 539
R DL+ ATNNF K +G G FG VY+GVL DG ++A+K+ QG +EF E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL-LDWETRFNIALG 598
+ H HLV L GFC E +L Y++M NG+L + ++ + + + WE R I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGT 657
A+GL YLH + IIH D+K N+LLD+N+ K++DFG++K T Q+H+ ++GT
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGK 717
GY+ PE+ ++EKSDVYS+G+VL E++ R + + + +A + G+
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 718 LRNILDSRL--NIDEQSDRVF--TAVKVALWCVQEDMSLRPSMTKVVQMLE 764
L I+D L I +S R F TAVK C+ RPSM V+ LE
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVK----CLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 160/295 (54%), Gaps = 21/295 (7%)
Query: 484 FTYRDLQTATNNFSV--------KLGQGGFGSVYQGVLPDGTRLAVKKLEGI-----GQG 530
F++ +L+ TNNF K+G+GGFG VY+G + + T +AVKKL + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 531 KKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
K++F E+ ++ H +LV+L GF ++G L Y +M NGSL + + L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSH 649
R IA G A G+ +LHE+ IH DIK N+LLD+ + AK+SDFGLA+ + Q+
Sbjct: 134 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 650 VFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYA 709
+ + + GT Y+APE + I+ KSD+YS+G+VLLEII G D + +
Sbjct: 191 MXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKE 248
Query: 710 FKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLE 764
EE + + +D ++N D S V VA C+ E + RP + KV Q+L+
Sbjct: 249 EIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 159/295 (53%), Gaps = 21/295 (7%)
Query: 484 FTYRDLQTATNNFSV--------KLGQGGFGSVYQGVLPDGTRLAVKKLEGI-----GQG 530
F++ +L+ TNNF K+G+GGFG VY+G + + T +AVKKL + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 531 KKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
K++F E+ ++ H +LV+L GF ++G L Y +M NGSL + + L W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSH 649
R IA G A G+ +LHE+ IH DIK N+LLD+ + AK+SDFGLA+ + Q+
Sbjct: 134 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 650 VFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYA 709
+ + GT Y+APE + I+ KSD+YS+G+VLLEII G D + +
Sbjct: 191 MXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKE 248
Query: 710 FKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLE 764
EE + + +D ++N D S V VA C+ E + RP + KV Q+L+
Sbjct: 249 EIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 158/295 (53%), Gaps = 21/295 (7%)
Query: 484 FTYRDLQTATNNFSV--------KLGQGGFGSVYQGVLPDGTRLAVKKLEGI-----GQG 530
F++ +L+ TNNF K+G+GGFG VY+G + + T +AVKKL + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 531 KKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
K++F E+ ++ H +LV+L GF ++G L Y +M NGSL + + L W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSH 649
R IA G A G+ +LHE+ IH DIK N+LLD+ + AK+SDFGLA+ + Q
Sbjct: 128 MRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 650 VFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYA 709
+ + GT Y+APE + I+ KSD+YS+G+VLLEII G D + +
Sbjct: 185 MXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKE 242
Query: 710 FKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLE 764
EE + + +D ++N D S V VA C+ E + RP + KV Q+L+
Sbjct: 243 EIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/295 (35%), Positives = 153/295 (51%), Gaps = 21/295 (7%)
Query: 484 FTYRDLQTATNNFSV--------KLGQGGFGSVYQGVLPDGTRLAVKKLEGI-----GQG 530
F++ +L+ TNNF K G+GGFG VY+G + + T +AVKKL + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 531 KKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
K++F E+ + H +LV+L GF ++G L Y + NGSL + + L W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSH 649
R IA G A G+ +LHE+ IH DIK N+LLD+ + AK+SDFGLA+ + Q
Sbjct: 125 XRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 650 VFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYA 709
+ + GT Y APE + I+ KSD+YS+G+VLLEII G D + +
Sbjct: 182 XXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP-QLLLDIKE 239
Query: 710 FKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLE 764
EE + + +D + N D S V VA C+ E + RP + KV Q+L+
Sbjct: 240 EIEDEEKTIEDYIDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 110/199 (55%), Gaps = 12/199 (6%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVK 551
N K+G G FG+V++ G+ +AVK L + + EF EV+I+ + H ++V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
G + + + E+++ GSL + + K LD R ++A AKG+ YLH + +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR---GTRGYLAPEWITN 668
I+H D+K N+L+D Y KV DFGL++L ++ F + GT ++APE + +
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDFGLSRL----KASXFLXSKXAAGTPEWMAPEVLRD 213
Query: 669 YAISEKSDVYSYGMVLLEI 687
+EKSDVYS+G++L E+
Sbjct: 214 EPSNEKSDVYSFGVILWEL 232
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 111/199 (55%), Gaps = 12/199 (6%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVK 551
N K+G G FG+V++ G+ +AVK L + + EF EV+I+ + H ++V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
G + + + E+++ GSL + + K LD R ++A AKG+ YLH + +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRN 157
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR---GTRGYLAPEWITN 668
I+H ++K N+L+D Y KV DFGL++L ++ F + + GT ++APE + +
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL----KASTFLSSKSAAGTPEWMAPEVLRD 213
Query: 669 YAISEKSDVYSYGMVLLEI 687
+EKSDVYS+G++L E+
Sbjct: 214 EPSNEKSDVYSFGVILWEL 232
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 153/332 (46%), Gaps = 50/332 (15%)
Query: 465 QETSEEDNFLENLSGMPVRF---TYRDLQTATNNFSVKL-----------GQGGFGSVYQ 510
QE EE F G TY D A + F+ +L G G FG V
Sbjct: 2 QEGDEELYFHFKFPGTKTYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCS 61
Query: 511 GVLP-DGTR---LAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRL 563
G L G R +A+K L+ +G + +++F E SI+G H ++V L G G +
Sbjct: 62 GRLKLPGKRDVAVAIKTLK-VGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVM 120
Query: 564 LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPEN 623
+ EFM NG+LD ++ K + +F + + G A G+ YL D +H D+ N
Sbjct: 121 IVIEFMENGALDAFLRKHDGQFTVI--QLVGMLRGIAAGMRYL---ADMGYVHRDLAARN 175
Query: 624 VLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT--RGYLAPEWITNYAISEKSDVYSYG 681
+L++ N KVSDFGL++++ + V+TT G + APE I + SDV+SYG
Sbjct: 176 ILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYG 235
Query: 682 MVLLEII--GGRKNFDPNETSDKAHFPSYAFKMMEEG-KLRNILDSRLNIDEQSDRVFTA 738
+V+ E++ G R +D + K +EEG +L +D + +
Sbjct: 236 IVMWEVMSYGERPYWDMSNQD--------VIKAIEEGYRLPAPMDCPAGLHQ-------- 279
Query: 739 VKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
+ L C Q++ + RP ++V +L+ + P
Sbjct: 280 --LMLDCWQKERAERPKFEQIVGILDKMIRNP 309
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 12/222 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F ++G G FG V+ G + ++A+K + +++F E ++ + H LV+L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C E L +EFM +G L ++ + Q L ET + L +G+AYL E C +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 124
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
IH D+ N L+ +N KVSDFG+ + + +Q +T+ GT+ + +PE +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSRY 181
Query: 672 SEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKM 712
S KSDV+S+G+++ E+ G+ ++ S+ S F++
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 223
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 12/222 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F ++G G FG V+ G + ++A+K + +++F E ++ + H LV+L G
Sbjct: 8 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 67
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C E L +EFM +G L ++ + Q L ET + L +G+AYL E C +
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 122
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
IH D+ N L+ +N KVSDFG+ + + +Q +T+ GT+ + +PE +
Sbjct: 123 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSRY 179
Query: 672 SEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKM 712
S KSDV+S+G+++ E+ G+ ++ S+ S F++
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 221
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 12/222 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F ++G G FG V+ G + ++A+K + +++F E ++ + H LV+L G
Sbjct: 13 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 72
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C E L +EFM +G L ++ + Q L ET + L +G+AYL E C +
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 127
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
IH D+ N L+ +N KVSDFG+ + + +Q +T+ GT+ + +PE +
Sbjct: 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSRY 184
Query: 672 SEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKM 712
S KSDV+S+G+++ E+ G+ ++ S+ S F++
Sbjct: 185 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 226
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 114/222 (51%), Gaps = 12/222 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F ++G G FG V+ G + ++A+K ++ + +F E ++ + H LV+L G
Sbjct: 30 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYG 89
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C E L +EFM +G L ++ + Q L ET + L +G+AYL E C +
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 144
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
IH D+ N L+ +N KVSDFG+ + + +Q +T+ GT+ + +PE +
Sbjct: 145 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSRY 201
Query: 672 SEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKM 712
S KSDV+S+G+++ E+ G+ ++ S+ S F++
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 243
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F ++G G FG V+ G + ++A+K + +++F E ++ + H LV+L G
Sbjct: 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 70
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C E L EFM +G L ++ + Q L ET + L +G+AYL E C +
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---V 125
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
IH D+ N L+ +N KVSDFG+ + + +Q +T+ GT+ + +PE +
Sbjct: 126 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSRY 182
Query: 672 SEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKM 712
S KSDV+S+G+++ E+ G+ ++ S+ S F++
Sbjct: 183 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 224
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 146/310 (47%), Gaps = 47/310 (15%)
Query: 484 FTYRDLQTATNNFSVKL-----------GQGGFGSVYQGVLP-DGTR---LAVKKLEG-- 526
FT+ D A F+ ++ G G FG V G L G R +A+K L+
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 527 IGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL 586
+ +++F +E SI+G H +++ L G + ++ E+M NGSLD ++ K + F
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 587 LDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE 646
+ + G G+ YL D +H D+ N+L++ N KVSDFG+++++ +
Sbjct: 130 VI--QLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD 184
Query: 647 QSHVFTTLRGTR---GYLAPEWITNYAISEKSDVYSYGMVLLEII--GGRKNFDPNETSD 701
+TT RG + + APE I + SDV+SYG+V+ E++ G R +D +
Sbjct: 185 PEAAYTT-RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD- 242
Query: 702 KAHFPSYAFKMMEEG-KLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVV 760
K +EEG +L +D + + + + L C Q++ S RP ++V
Sbjct: 243 -------VIKAIEEGYRLPPPMDCPIALHQ----------LMLDCWQKERSDRPKFGQIV 285
Query: 761 QMLEGICPVP 770
ML+ + P
Sbjct: 286 NMLDKLIRNP 295
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 141/295 (47%), Gaps = 34/295 (11%)
Query: 487 RDLQTATNNFSVKLGQGGFGSVYQGVLPDGTR----LAVKKLEGIG---QGKKEFRAEVS 539
++L + +G G FG V G L ++ +A+K L+ +G + +++F E S
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT 599
I+G H ++++L G + ++ E+M NGSLD ++ K + +F + + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR- 658
A G+ YL D +H D+ N+L++ N KVSDFGLA+++ + +TT RG +
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT-RGGKI 212
Query: 659 --GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEE 715
+ +PE I + SDV+SYG+VL E++ G + + D K ++E
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDE 265
Query: 716 GKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
G + D ++ L C Q+D + RP ++V +L+ + P
Sbjct: 266 G---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 113/222 (50%), Gaps = 12/222 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F ++G G FG V+ G + ++A+K + +++F E ++ + H LV+L G
Sbjct: 10 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYG 69
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C E L +EFM +G L ++ + Q L ET + L +G+AYL E +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEE---ASV 124
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
IH D+ N L+ +N KVSDFG+ + + +Q +T+ GT+ + +PE +
Sbjct: 125 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ---YTSSTGTKFPVKWASPEVFSFSRY 181
Query: 672 SEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKM 712
S KSDV+S+G+++ E+ G+ ++ S+ S F++
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRL 223
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 144/301 (47%), Gaps = 36/301 (11%)
Query: 482 VRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLP-DGTR---LAVKKLEG--IGQGKKEFR 535
VR +++ + +G G FG V G L G R +A+K L+ + +++F
Sbjct: 4 VREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL 63
Query: 536 AEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNI 595
+E SI+G H +++ L G + ++ E+M NGSLD ++ K + F + +
Sbjct: 64 SEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI--QLVGM 121
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR 655
G G+ YL D +H D+ N+L++ N KVSDFG+++++ + +TT R
Sbjct: 122 LRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT-R 177
Query: 656 GTR---GYLAPEWITNYAISEKSDVYSYGMVLLEII--GGRKNFDPNETSDKAHFPSYAF 710
G + + APE I + SDV+SYG+V+ E++ G R +D +
Sbjct: 178 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--------VI 229
Query: 711 KMMEEG-KLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPV 769
K +EEG +L +D + + + + L C Q++ S RP ++V ML+ +
Sbjct: 230 KAIEEGYRLPPPMDCPIALHQ----------LMLDCWQKERSDRPKFGQIVNMLDKLIRN 279
Query: 770 P 770
P
Sbjct: 280 P 280
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 45/308 (14%)
Query: 485 TYRDLQTATNNFSVKL-----------GQGGFGSVYQGVLPDGTR----LAVKKLEGIG- 528
TY D + F+ +L G G FG V G L ++ +A+K L+ +G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGY 85
Query: 529 --QGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL 586
+ +++F E SI+G H ++++L G + ++ E+M NGSLD ++ K + +F
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 587 LDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE 646
+ + G A G+ YL D +H D+ N+L++ N KVSDFGL++++ +
Sbjct: 146 V--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 647 QSHVFTTLRGTR---GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDK 702
+TT RG + + +PE I + SDV+SYG+VL E++ G + + D
Sbjct: 201 PEAAYTT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD- 258
Query: 703 AHFPSYAFKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQM 762
K ++EG + D ++ L C Q+D + RP ++V +
Sbjct: 259 ------VIKAVDEG---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 763 LEGICPVP 770
L+ + P
Sbjct: 304 LDKLIRNP 311
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 45/308 (14%)
Query: 485 TYRDLQTATNNFSVKL-----------GQGGFGSVYQGVLPDGTR----LAVKKLEGIG- 528
TY D + F+ +L G G FG V G L ++ +A+K L+ +G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGY 85
Query: 529 --QGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL 586
+ +++F E SI+G H ++++L G + ++ E+M NGSLD ++ K + +F
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 145
Query: 587 LDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE 646
+ + G A G+ YL D +H D+ N+L++ N KVSDFGL++++ +
Sbjct: 146 V--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 647 QSHVFTTLRGTR---GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDK 702
+TT RG + + +PE I + SDV+SYG+VL E++ G + + D
Sbjct: 201 PEAAYTT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD- 258
Query: 703 AHFPSYAFKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQM 762
K ++EG + D ++ L C Q+D + RP ++V +
Sbjct: 259 ------VIKAVDEG---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 763 LEGICPVP 770
L+ + P
Sbjct: 304 LDKLIRNP 311
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 34/295 (11%)
Query: 487 RDLQTATNNFSVKLGQGGFGSVYQGVLPDGTR----LAVKKLEGIG---QGKKEFRAEVS 539
++L + +G G FG V G L ++ +A+K L+ +G + +++F E S
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT 599
I+G H ++++L G + ++ E+M NGSLD ++ K + +F + + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR- 658
A G+ YL D +H D+ N+L++ N KVSDFGL++++ + +TT RG +
Sbjct: 157 ASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKI 212
Query: 659 --GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEE 715
+ +PE I + SDV+SYG+VL E++ G + + D K ++E
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDE 265
Query: 716 GKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
G + D ++ L C Q+D + RP ++V +L+ + P
Sbjct: 266 G---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 142/310 (45%), Gaps = 45/310 (14%)
Query: 484 FTYRDLQTATNNFSVKL-----------GQGGFGSVYQGVLP-DGTR---LAVKKLEG-- 526
FT+ D A F+ ++ G G FG V G L G R +A+K L+
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 527 IGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL 586
+ +++F +E SI+G H +++ L G + T ++ EFM NGSLD ++ + + +F
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 587 LDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE 646
+ + G A G+ YL D +H D+ N+L++ N KVSDFGL++ + +
Sbjct: 134 V--IQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 188
Query: 647 QSH-VFTTLRGTR---GYLAPEWITNYAISEKSDVYSYGMVLLEII--GGRKNFDPNETS 700
S +T+ G + + APE I + SDV+SYG+V+ E++ G R +D
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD----- 243
Query: 701 DKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVV 760
M + N ++ + D ++ L C Q+D + RP ++V
Sbjct: 244 ------------MTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIV 291
Query: 761 QMLEGICPVP 770
L+ + P
Sbjct: 292 NTLDKMIRNP 301
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 144/308 (46%), Gaps = 45/308 (14%)
Query: 485 TYRDLQTATNNFSVKL-----------GQGGFGSVYQGVLPDGTR----LAVKKLEGIG- 528
TY D + F+ +L G G FG V G L ++ +A+K L+ +G
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGY 83
Query: 529 --QGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL 586
+ +++F E SI+G H ++++L G + ++ E+M NGSLD ++ K + +F
Sbjct: 84 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFT 143
Query: 587 LDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE 646
+ + G A G+ YL D +H D+ N+L++ N KVSDFGL++++ +
Sbjct: 144 V--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
Query: 647 QSHVFTTLRGTR---GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDK 702
+TT RG + + +PE I + SDV+SYG+VL E++ G + + D
Sbjct: 199 PEAAYTT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD- 256
Query: 703 AHFPSYAFKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQM 762
K ++EG + D ++ L C Q+D + RP ++V +
Sbjct: 257 ------VIKAVDEG---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 301
Query: 763 LEGICPVP 770
L+ + P
Sbjct: 302 LDKLIRNP 309
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 34/295 (11%)
Query: 487 RDLQTATNNFSVKLGQGGFGSVYQGVLPDGTR----LAVKKLEGIG---QGKKEFRAEVS 539
++L + +G G FG V G L ++ +A+K L+ +G + +++F E S
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 69
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT 599
I+G H ++++L G + ++ E+M NGSLD ++ K + +F + + G
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVI--QLVGMLRGI 127
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR- 658
A G+ YL D +H D+ N+L++ N KVSDFGL++++ + +TT RG +
Sbjct: 128 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKI 183
Query: 659 --GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEE 715
+ +PE I + SDV+SYG+VL E++ G + + D K ++E
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDE 236
Query: 716 GKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
G + D ++ L C Q+D + RP ++V +L+ + P
Sbjct: 237 G---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 282
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 34/295 (11%)
Query: 487 RDLQTATNNFSVKLGQGGFGSVYQGVLPDGTR----LAVKKLEGIG---QGKKEFRAEVS 539
++L + +G G FG V G L ++ +A+K L+ +G + +++F E S
Sbjct: 28 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 86
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT 599
I+G H ++++L G + ++ E+M NGSLD ++ K + +F + + G
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 144
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR- 658
A G+ YL D +H D+ N+L++ N KVSDFGL++++ + +TT RG +
Sbjct: 145 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKI 200
Query: 659 --GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEE 715
+ +PE I + SDV+SYG+VL E++ G + + D K ++E
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDE 253
Query: 716 GKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
G + D ++ L C Q+D + RP ++V +L+ + P
Sbjct: 254 G---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 299
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 148/309 (47%), Gaps = 47/309 (15%)
Query: 485 TYRDLQTATNNFSVKL-----------GQGGFGSVYQGVLP-DGTR---LAVKKLEGIG- 528
TY D A + F+ ++ G G FG V G L G R +A+K L+ +G
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLK-VGY 62
Query: 529 --QGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL 586
+ +++F E SI+G H +++ L G + ++ E+M NGSLD ++ K + +F
Sbjct: 63 TEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFT 122
Query: 587 LDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE 646
+ + G + G+ YL D +H D+ N+L++ N KVSDFGL++++ +
Sbjct: 123 VI--QLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 177
Query: 647 QSHVFTTLRGTR---GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDK 702
+TT RG + + APE I + SDV+SYG+V+ E++ G + + D
Sbjct: 178 PEAAYTT-RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQD- 235
Query: 703 AHFPSYAFKMMEEG-KLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQ 761
K +EEG +L + +D + ++ L C Q++ + RP ++V
Sbjct: 236 ------VIKAVEEGYRLPSPMDCPAAL----------YQLMLDCWQKERNSRPKFDEIVN 279
Query: 762 MLEGICPVP 770
ML+ + P
Sbjct: 280 MLDKLIRNP 288
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 138/283 (48%), Gaps = 36/283 (12%)
Query: 500 LGQGGFGSVYQGVLP-DGTR---LAVKKLEG--IGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G G FG V G L G R +A+K L+ + +++F +E SI+G H +++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G + ++ E+M NGSLD ++ K + F + + G G+ YL D
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVI--QLVGMLRGIGSGMKYLS---DMS 130
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYA 670
+H D+ N+L++ N KVSDFG+++++ + +TT RG + + APE I
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT-RGGKIPIRWTAPEAIAYRK 189
Query: 671 ISEKSDVYSYGMVLLEII--GGRKNFDPNETSDKAHFPSYAFKMMEEG-KLRNILDSRLN 727
+ SDV+SYG+V+ E++ G R +D + K +EEG +L +D +
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQD--------VIKAIEEGYRLPPPMDCPIA 241
Query: 728 IDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
+ + + L C Q++ S RP ++V ML+ + P
Sbjct: 242 LHQ----------LMLDCWQKERSDRPKFGQIVNMLDKLIRNP 274
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 34/295 (11%)
Query: 487 RDLQTATNNFSVKLGQGGFGSVYQGVLPDGTR----LAVKKLEGIG---QGKKEFRAEVS 539
++L + +G G FG V G L ++ +A+K L+ +G + +++F E S
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT 599
I+G H ++++L G + ++ E+M NGSLD ++ K + +F + + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR- 658
A G+ YL D +H D+ N+L++ N KVSDFGL++++ + +TT RG +
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKI 212
Query: 659 --GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEE 715
+ +PE I + SDV+SYG+VL E++ G + + D K ++E
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDE 265
Query: 716 GKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
G + D ++ L C Q+D + RP ++V +L+ + P
Sbjct: 266 G---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 34/295 (11%)
Query: 487 RDLQTATNNFSVKLGQGGFGSVYQGVLPDGTR----LAVKKLEGIG---QGKKEFRAEVS 539
++L + +G G FG V G L ++ +A+K L+ +G + +++F E S
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT 599
I+G H ++++L G + ++ E+M NGSLD ++ K + +F + + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR- 658
A G+ YL D +H D+ N+L++ N KVSDFGL++++ + +TT RG +
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKI 212
Query: 659 --GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEE 715
+ +PE I + SDV+SYG+VL E++ G + + D K ++E
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDE 265
Query: 716 GKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
G + D ++ L C Q+D + RP ++V +L+ + P
Sbjct: 266 G---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 34/295 (11%)
Query: 487 RDLQTATNNFSVKLGQGGFGSVYQGVLPDGTR----LAVKKLEGIG---QGKKEFRAEVS 539
++L + +G G FG V G L ++ +A+K L+ +G + +++F E S
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT 599
I+G H ++++L G + ++ E+M NGSLD ++ K + +F + + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR- 658
A G+ YL D +H D+ N+L++ N KVSDFGL +++ + +TT RG +
Sbjct: 157 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT-RGGKI 212
Query: 659 --GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEE 715
+ +PE I + SDV+SYG+VL E++ G + + D K ++E
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDE 265
Query: 716 GKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
G + D ++ L C Q+D + RP ++V +L+ + P
Sbjct: 266 G---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 136/282 (48%), Gaps = 33/282 (11%)
Query: 500 LGQGGFGSVYQGVLPDGT-----RLAVKKLEG--IGQGKKEFRAEVSIIGSIHHLHLVKL 552
+G G FG VY+G+L + +A+K L+ + + +F E I+G H ++++L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G ++ ++ E+M NG+LDK++ +K+ EF + + G A G+ YL +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLREKDGEFSV--LQLVGMLRGIAAGMKYL---ANM 166
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT--RGYLAPEWITNYA 670
+H D+ N+L++ N KVSDFGL++++ + +TT G + APE I+
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 671 ISEKSDVYSYGMVLLEII--GGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNI 728
+ SDV+S+G+V+ E++ G R ++ + ++ ++ +
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWE-----------------LSNHEVMKAINDGFRL 269
Query: 729 DEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
D ++ + C Q++ + RP +V +L+ + P
Sbjct: 270 PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 143/308 (46%), Gaps = 45/308 (14%)
Query: 485 TYRDLQTATNNFSVKL-----------GQGGFGSVYQGVLPDGTR----LAVKKLEGIG- 528
TY D + F+ +L G G FG V G L ++ +A+K L+ +G
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGY 85
Query: 529 --QGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL 586
+ +++F E SI+G H ++++L G + ++ E M NGSLD ++ K + +F
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFT 145
Query: 587 LDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE 646
+ + G A G+ YL D +H D+ N+L++ N KVSDFGL++++ +
Sbjct: 146 V--IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
Query: 647 QSHVFTTLRGTR---GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDK 702
+TT RG + + +PE I + SDV+SYG+VL E++ G + + D
Sbjct: 201 PEAAYTT-RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD- 258
Query: 703 AHFPSYAFKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQM 762
K ++EG + D ++ L C Q+D + RP ++V +
Sbjct: 259 ------VIKAVDEG---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303
Query: 763 LEGICPVP 770
L+ + P
Sbjct: 304 LDKLIRNP 311
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 34/295 (11%)
Query: 487 RDLQTATNNFSVKLGQGGFGSVYQGVLPDGTR----LAVKKLEGIG---QGKKEFRAEVS 539
++L + +G G FG V G L ++ +A+K L+ +G + +++F E S
Sbjct: 11 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 69
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT 599
I+G H ++++L G + ++ E M NGSLD ++ K + +F + + G
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVI--QLVGMLRGI 127
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR- 658
A G+ YL D +H D+ N+L++ N KVSDFGL++++ + +TT RG +
Sbjct: 128 ASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKI 183
Query: 659 --GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEE 715
+ +PE I + SDV+SYG+VL E++ G + + D K ++E
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDE 236
Query: 716 GKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
G + D ++ L C Q+D + RP ++V +L+ + P
Sbjct: 237 G---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 282
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 148/322 (45%), Gaps = 33/322 (10%)
Query: 459 KAPESPQETSEEDNFLENLSGMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLP-DGT 517
K PE PQ +E + E G R R+++ + + +G G G V G L G
Sbjct: 19 KLPE-PQFYAEPHTYEE--PGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQ 75
Query: 518 R---LAVKKLEG--IGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANG 572
R +A+K L+ + +++F +E SI+G H ++++L G G ++ E+M NG
Sbjct: 76 RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 573 SLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHA 632
SLD ++ + +F + + G G+ YL D +H D+ NVL+D N
Sbjct: 136 SLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVC 190
Query: 633 KVSDFGLAKLMTREQSHVFTTLRGT--RGYLAPEWITNYAISEKSDVYSYGMVLLEIIG- 689
KVSDFGL++++ + +TT G + APE I S SDV+S+G+V+ E++
Sbjct: 191 KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
Query: 690 GRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQED 749
G + + D +EEG RL ++ L C +D
Sbjct: 251 GERPYWNMTNRD-------VISSVEEGY-------RLPAPMGCPHALH--QLMLDCWHKD 294
Query: 750 MSLRPSMTKVVQMLEGICPVPQ 771
+ RP +++V +L+ + P+
Sbjct: 295 RAQRPRFSQIVSVLDALIRSPE 316
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 34/295 (11%)
Query: 487 RDLQTATNNFSVKLGQGGFGSVYQGVLPDGTR----LAVKKLEGIG---QGKKEFRAEVS 539
++L + +G G FG V G L ++ +A+K L+ +G + +++F E S
Sbjct: 40 KELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEAS 98
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT 599
I+G H ++++L G + ++ E M NGSLD ++ K + +F + + G
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV--IQLVGMLRGI 156
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR- 658
A G+ YL D +H D+ N+L++ N KVSDFGL++++ + +TT RG +
Sbjct: 157 ASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-RGGKI 212
Query: 659 --GYLAPEWITNYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEE 715
+ +PE I + SDV+SYG+VL E++ G + + D K ++E
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDE 265
Query: 716 GKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
G + D ++ L C Q+D + RP ++V +L+ + P
Sbjct: 266 G---------YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 34/283 (12%)
Query: 500 LGQGGFGSVYQGVLPDGTR----LAVKKLEG--IGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G G FG V +G L + +A+K L+G + ++EF +E SI+G H ++++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G ++ EFM NG+LD ++ + +F + + G A G+ YL E
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI--QLVGMLRGIASGMRYLAE---MS 136
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTR---GYLAPEWITNY 669
+H D+ N+L++ N KVSDFGL++ + S +T+ G + + APE I
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 670 AISEKSDVYSYGMVLLEII--GGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLN 727
+ SD +SYG+V+ E++ G R +D M + N ++
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFGERPYWD-----------------MSNQDVINAIEQDYR 239
Query: 728 IDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
+ D + ++ L C Q+D + RP +VV L+ + P
Sbjct: 240 LPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRNP 282
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 147/322 (45%), Gaps = 33/322 (10%)
Query: 459 KAPESPQETSEEDNFLENLSGMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLP-DGT 517
K PE PQ +E + E G R R+++ + + +G G G V G L G
Sbjct: 19 KLPE-PQFYAEPHTYEE--PGRAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQ 75
Query: 518 R---LAVKKLEG--IGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANG 572
R +A+K L+ + +++F +E SI+G H ++++L G G ++ E+M NG
Sbjct: 76 RDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENG 135
Query: 573 SLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHA 632
SLD ++ + +F + + G G+ YL D +H D+ NVL+D N
Sbjct: 136 SLDTFLRTHDGQFTI--MQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVC 190
Query: 633 KVSDFGLAKLMTREQSHVFTTLRGT--RGYLAPEWITNYAISEKSDVYSYGMVLLEIIG- 689
KVSDFGL++++ + TT G + APE I S SDV+S+G+V+ E++
Sbjct: 191 KVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
Query: 690 GRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQED 749
G + + D +EEG RL ++ L C +D
Sbjct: 251 GERPYWNMTNRD-------VISSVEEGY-------RLPAPMGCPHALH--QLMLDCWHKD 294
Query: 750 MSLRPSMTKVVQMLEGICPVPQ 771
+ RP +++V +L+ + P+
Sbjct: 295 RAQRPRFSQIVSVLDALIRSPE 316
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 103/210 (49%), Gaps = 25/210 (11%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKL-----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G GGFG VY+ G +AVK E I Q + R E + + H +++ LRG
Sbjct: 15 IGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKN--QEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
C + + L EF G L++ + K + L++W A+ A+G+ YLH++
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIV 127
Query: 613 RIIHCDIKPENVLLDD--------NYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
IIH D+K N+L+ N K++DFGLA+ R + G ++APE
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK---MSAAGAYAWMAPE 184
Query: 665 WITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
I S+ SDV+SYG++L E++ G F
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 137/301 (45%), Gaps = 34/301 (11%)
Query: 482 VRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLPDGTR----LAVKKLEG--IGQGKKEFR 535
VR +++ + +G G FG V +G L + +A+K L+G + ++EF
Sbjct: 6 VREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFL 65
Query: 536 AEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNI 595
+E SI+G H ++++L G ++ EFM NG+LD ++ + +F + +
Sbjct: 66 SEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI--QLVGM 123
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTL 654
G A G+ YL E +H D+ N+L++ N KVSDFGL++ + S T+
Sbjct: 124 LRGIASGMRYLAE---MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS 180
Query: 655 RGTR---GYLAPEWITNYAISEKSDVYSYGMVLLEII--GGRKNFDPNETSDKAHFPSYA 709
G + + APE I + SD +SYG+V+ E++ G R +D
Sbjct: 181 LGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD-------------- 226
Query: 710 FKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPV 769
M + N ++ + D + ++ L C Q+D + RP +VV L+ +
Sbjct: 227 ---MSNQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 283
Query: 770 P 770
P
Sbjct: 284 P 284
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 114/209 (54%), Gaps = 23/209 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKL-EGIG-QGKKEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G + A+K L E G + EF E I+ S+ H HLV+L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M +G L +++ + + LL+W + AKG+ YL E
Sbjct: 83 LGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEE 135
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWIT 667
+R++H D+ NVL+ H K++DFGLA+L+ E+ + + ++A E I
Sbjct: 136 ---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 668 NYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
+ +SDV+SYG+ + E++ G K +D
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 114/209 (54%), Gaps = 23/209 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKL-EGIG-QGKKEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G + A+K L E G + EF E I+ S+ H HLV+L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M +G L +++ + + LL+W + AKG+ YL E
Sbjct: 106 LGVCLSPTIQLVT-QLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEE 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWIT 667
+R++H D+ NVL+ H K++DFGLA+L+ E+ + + ++A E I
Sbjct: 159 ---RRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 668 NYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
+ +SDV+SYG+ + E++ G K +D
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 133/283 (46%), Gaps = 34/283 (12%)
Query: 500 LGQGGFGSVYQGVLP-DGTR---LAVKKLEG--IGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G G FG V G L G R +A+K L+ + +++F +E SI+G H +++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G + T ++ EFM NGSLD ++ + + +F + + G A G+ YL D
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV--IQLVGMLRGIAAGMKYL---ADMN 129
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTR---GYLAPEWITNY 669
+H + N+L++ N KVSDFGL++ + + S +T+ G + + APE I
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 670 AISEKSDVYSYGMVLLEII--GGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLN 727
+ SDV+SYG+V+ E++ G R +D M + N ++
Sbjct: 190 KFTSASDVWSYGIVMWEVMSYGERPYWD-----------------MTNQDVINAIEQDYR 232
Query: 728 IDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGICPVP 770
+ D ++ L C Q+D + RP ++V L+ + P
Sbjct: 233 LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNP 275
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 108 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 159
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 160 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 215
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 216 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 83 LGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 190
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 190
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 193
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 85 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 192
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 89 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 140
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 141 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 196
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 197 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 141
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 197
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 87 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 138
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 139 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 194
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 193
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 93 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 144
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 145 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 200
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 201 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 193
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 84 LGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 135
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 136 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 191
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 84 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 135
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 136 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 191
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 192 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 77 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 128
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 129 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 184
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 185 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 192
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 86 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 137
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 138 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 193
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 194 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 83 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 190
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 190
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 131/271 (48%), Gaps = 24/271 (8%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G FG VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQ-SDRV 735
V+++G++L EI P D PS ++++E+ D R+ E ++V
Sbjct: 193 VWAFGVLLWEI--ATYGMSPYPGID----PSQVYELLEK-------DYRMERPEGCPEKV 239
Query: 736 FTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
+ ++ C Q + S RPS ++ Q E +
Sbjct: 240 YELMRA---CWQWNPSDRPSFAEIHQAFETM 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 131/271 (48%), Gaps = 24/271 (8%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQ-----EVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 192
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQ-SDRV 735
V+++G++L EI P D PS ++++E+ D R+ E ++V
Sbjct: 193 VWAFGVLLWEI--ATYGMSPYPGID----PSQVYELLEK-------DYRMERPEGCPEKV 239
Query: 736 FTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
+ ++ C Q + S RPS ++ Q E +
Sbjct: 240 YELMRA---CWQWNPSDRPSFAEIHQAFETM 267
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 86 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 140
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISEKS 675
++ N+L+ D K++DFGLA+L+ + + +T G + + APE I + KS
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 676 DVYSYGMVLLEII 688
DV+S+G++L EI+
Sbjct: 198 DVWSFGILLTEIV 210
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 30/274 (10%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISE 673
D+ N L+ +N+ KV+DFGL++LMT FT G + + APE + S
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMT---GDTFTAHAGAKFPIKWTAPESLAYNKFSI 189
Query: 674 KSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQ-S 732
KSDV+++G++L EI P D PS ++++E+ D R+ E
Sbjct: 190 KSDVWAFGVLLWEI--ATYGMSPYPGID----PSQVYELLEK-------DYRMERPEGCP 236
Query: 733 DRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 237 EKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 267
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 80 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISEKS 675
++ N+L+ D K++DFGLA+L+ + + +T G + + APE I + KS
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 676 DVYSYGMVLLEII 688
DV+S+G++L EI+
Sbjct: 192 DVWSFGILLTEIV 204
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 75 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 129
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISEKS 675
++ N+L+ D K++DFGLA+L+ + + +T G + + APE I + KS
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 676 DVYSYGMVLLEII 688
DV+S+G++L EI+
Sbjct: 187 DVWSFGILLTEIV 199
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 85 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 139
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISEKS 675
++ N+L+ D K++DFGLA+L+ + + +T G + + APE I + KS
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 676 DVYSYGMVLLEII 688
DV+S+G++L EI+
Sbjct: 197 DVWSFGILLTEIV 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 90 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 144
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISEKS 675
++ N+L+ D K++DFGLA+L+ + + +T G + + APE I + KS
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 676 DVYSYGMVLLEII 688
DV+S+G++L EI+
Sbjct: 202 DVWSFGILLTEIV 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 113/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + A+G+ YL
Sbjct: 80 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYLE- 131
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 132 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 187
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 188 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 89 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 143
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
++ N+L+ D K++DFGLA+L+ + + + APE I + KSDV+
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 679 SYGMVLLEII 688
S+G++L EI+
Sbjct: 204 SFGILLTEIV 213
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 88 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 142
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
++ N+L+ D K++DFGLA+L+ + + + APE I + KSDV+
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 679 SYGMVLLEII 688
S+G++L EI+
Sbjct: 203 SFGILLTEIV 212
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 82 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 136
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
++ N+L+ D K++DFGLA+L+ + + + APE I + KSDV+
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 679 SYGMVLLEII 688
S+G++L EI+
Sbjct: 197 SFGILLTEIV 206
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 86 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 140
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
++ N+L+ D K++DFGLA+L+ + + + APE I + KSDV+
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 679 SYGMVLLEII 688
S+G++L EI+
Sbjct: 201 SFGILLTEIV 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 81 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 135
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
++ N+L+ D K++DFGLA+L+ + + + APE I + KSDV+
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 679 SYGMVLLEII 688
S+G++L EI+
Sbjct: 196 SFGILLTEIV 205
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 80 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
++ N+L+ D K++DFGLA+L+ + + + APE I + KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 679 SYGMVLLEII 688
S+G++L EI+
Sbjct: 195 SFGILLTEIV 204
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
L G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 190
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 98/190 (51%), Gaps = 5/190 (2%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 80 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
++ N+L+ D K++DFGLA+L+ + + + APE I + KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 679 SYGMVLLEII 688
S+G++L EI+
Sbjct: 195 SFGILLTEIV 204
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+ +L K KE E ++ S+ + H+ +L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 117 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 168
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 169 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 224
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 225 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 134
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFG AKL+ E+ G + ++A E
Sbjct: 135 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALES 190
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 191 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
L G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 141
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 197
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 85 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFG AKL+ E+ G + ++A E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALES 192
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 141
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFG AKL+ E+ G + ++A E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALES 197
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 87 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 138
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFG AKL+ E+ G + ++A E
Sbjct: 139 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALES 194
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 195 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFG AKL+ E+ G + ++A E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALES 192
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
L G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 90 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 141
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFGLAKL+ E+ G + ++A E
Sbjct: 142 --DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA--EGGKVPIKWMALES 197
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 198 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +P+G ++ A+K+L K KE E ++ S+ + H+ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDWETRFNIALGTAKGLAYLHE 608
G C T +L+ + M G L ++ + ++LL+W + AKG+ YL
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYLE- 136
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEW 665
D+R++H D+ NVL+ H K++DFG AKL+ E+ G + ++A E
Sbjct: 137 --DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA--EGGKVPIKWMALES 192
Query: 666 ITNYAISEKSDVYSYGMVLLEIIG-GRKNFD 695
I + + +SDV+SYG+ + E++ G K +D
Sbjct: 193 ILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 102/193 (52%), Gaps = 11/193 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH +
Sbjct: 76 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRN 130
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISEKS 675
++ N+L+ D K++DFGLA+L+ + + +T G + + APE I + KS
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLI---EDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 676 DVYSYGMVLLEII 688
DV+S+G++L EI+
Sbjct: 188 DVWSFGILLTEIV 200
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 128/283 (45%), Gaps = 36/283 (12%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQ-GKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
LG+G FG + + G + +K+L + ++ F EV ++ + H +++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHC 617
+ E++ G+L I + ++ W R + A A G+AYLH IIH
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMDSQY--PWSQRVSFAKDIASGMAYLH---SMNIIHR 132
Query: 618 DIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV-------------FTTLRGTRGYLAPE 664
D+ N L+ +N + V+DFGLA+LM E++ T+ G ++APE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 665 WITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEG-KLRNILD 723
I + EK DV+S+G+VL EII GR N DP+ Y + M+ G +R LD
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII-GRVNADPD----------YLPRTMDFGLNVRGFLD 241
Query: 724 SRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
+ + + + C D RPS K+ LE +
Sbjct: 242 RYCPPNCPP----SFFPITVRCCDLDPEKRPSFVKLEHWLETL 280
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 329
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 330 VVSEEPIYIVT-EYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNY 384
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 441
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 442 TIKSDVWSFGILLTEL 457
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 200 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 242
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 243 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 274
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSD 195
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 196 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 238
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 239 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 270
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 247 VVSEEPIYIVT-EYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 359 TIKSDVWSFGILLTEL 374
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 247 VVSEEPIYIVT-EYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 359 TIKSDVWSFGILLTEL 374
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 200 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 242
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 243 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 274
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 140/298 (46%), Gaps = 38/298 (12%)
Query: 479 GMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAE 537
GM + +++ KLG G +G VY+GV +AVK L+ +EF E
Sbjct: 1 GMSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE 60
Query: 538 VSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIAL 597
+++ I H +LV+L G C + EFM G+L ++ + N++ E + L
Sbjct: 61 AAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ-----EVNAVVLL 115
Query: 598 GTAKGLAYLHEDCDQR-IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRG 656
A ++ E +++ IH D+ N L+ +N+ KV+DFGL++LMT +T G
Sbjct: 116 YMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAPAG 172
Query: 657 TR---GYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYA 709
+ + APE + S KSDV+++G++L EI T + +P S
Sbjct: 173 AKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA----------TYGMSPYPGIDLSQV 222
Query: 710 FKMMEEGKLRNILDSRLNIDEQ-SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++++E+ D R+ E ++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 223 YELLEK-------DYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 270
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 247 VVSEEPIYIVG-EYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNY 301
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 358
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 359 TIKSDVWSFGILLTEL 374
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 200 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 242
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 243 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 274
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ I H LV+L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYA 80
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 81 VVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 121/232 (52%), Gaps = 28/232 (12%)
Query: 483 RFTYRDLQTATNN---FSVKLGQGGFGSVYQG-VLPDGTRLAVKKL-EGIGQGK------ 531
F L T +N + ++G+GGFG V++G ++ D + +A+K L G +G+
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 532 -KEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
+EF+ EV I+ +++H ++VKL G ++ EF+ G L + K + W
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHP--IKWS 122
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLL---DDNYH--AKVSDFGLAKLMTR 645
+ + L A G+ Y+ ++ + I+H D++ N+ L D+N AKV+DFGL ++
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL----SQ 177
Query: 646 EQSHVFTTLRGTRGYLAPEWI--TNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
+ H + L G ++APE I + +EK+D YS+ M+L I+ G FD
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 195 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 237
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 238 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 198
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 199 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 241
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 242 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 273
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 14 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 73
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 74 VVSEEPIYIVT-EYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNY 128
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 185
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 186 TIKSDVWSFGILLTEL 201
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 24/271 (8%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQ-SDRV 735
V+++G++L EI P D S ++++E+ D R+ E ++V
Sbjct: 195 VWAFGVLLWEI--ATYGMSPYPGIDL----SQVYELLEK-------DYRMERPEGCPEKV 241
Query: 736 FTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
+ ++ C Q + S RPS ++ Q E +
Sbjct: 242 YELMRA---CWQWNPSDRPSFAEIHQAFETM 269
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 7 PTQFEERHLK-----FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L EF+ GSL +++ K + +D
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER--IDHIKL 119
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 120 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVSAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 199
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 200 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 242
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 243 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 274
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 132/274 (48%), Gaps = 30/274 (10%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHC 617
+ EFM G+L ++ + N++ ++ +A + + YL + + IH
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK---KNFIHR 140
Query: 618 DIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDV 677
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSDV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 678 YSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ-S 732
+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 201 WAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGCP 243
Query: 733 DRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 244 EKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 274
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 11 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 70
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 71 VVSEEPIXIVT-EYMSKGSLLDFLKGETGKY-LRLPQLVDMAAQIASGMAYVER---MNY 125
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
+H D++ N+L+ +N KV+DFGLA+L+ + + + APE + K
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 185
Query: 675 SDVYSYGMVLLEI 687
SDV+S+G++L E+
Sbjct: 186 SDVWSFGILLTEL 198
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 207
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 208 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 250
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 251 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 282
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQ-----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 195 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 237
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 238 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 269
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
++ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 401
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 402 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 444
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 445 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 476
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 195 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 237
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 238 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQ-----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 195 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 237
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 238 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 269
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 197 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 239
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 240 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 271
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 97/190 (51%), Gaps = 5/190 (2%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G G V+ G T++AVK L+ F AE +++ + H LV+L +
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ E+M NGSL ++ K L ++A A+G+A++ E + IH D
Sbjct: 80 EPIYIIT-EYMENGSLVDFL-KTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRD 134
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
++ N+L+ D K++DFGLA+L+ + + + APE I + KSDV+
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 679 SYGMVLLEII 688
S+G++L EI+
Sbjct: 195 SFGILLTEIV 204
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 196
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 197 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 239
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 240 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 271
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 128/268 (47%), Gaps = 29/268 (10%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEG 559
+G+G FG V + +A+K++E + +K F E+ + ++H ++VKL G C
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLNP 74
Query: 560 THRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDI 619
L E+ GSL + + L ++G+AYLH + +IH D+
Sbjct: 75 V--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 132
Query: 620 KPENVLL-DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
KP N+LL K+ DFG A + Q+H+ T +G+ ++APE SEK DV+
Sbjct: 133 KPPNLLLVAGGTVLKICDFGTACDI---QTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVF 188
Query: 679 SYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMM---EEGKLRNILDSRLNIDEQSDRV 735
S+G++L E+I RK FD AF++M G ++ N+ + + +
Sbjct: 189 SWGIILWEVITRRKPFD--------EIGGPAFRIMWAVHNGTRPPLIK---NLPKPIESL 237
Query: 736 FTAVKVALWCVQEDMSLRPSMTKVVQML 763
T C +D S RPSM ++V+++
Sbjct: 238 MTR------CWSKDPSQRPSMEEIVKIM 259
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 12 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 71
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 72 VVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNY 126
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 183
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 184 TIKSDVWSFGILLTEL 199
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 132/275 (48%), Gaps = 32/275 (11%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 194
Query: 677 VYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ- 731
V+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 195 VWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGC 237
Query: 732 SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 238 PEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 269
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 10 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 69
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 70 VVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNY 124
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 181
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 182 TIKSDVWSFGILLTEL 197
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 112/242 (46%), Gaps = 16/242 (6%)
Query: 463 SPQETSEEDNFLENLSGMPVRFTYRDLQTATNNFSV--KLGQGGFGSVYQGVLPDGTRLA 520
P ++ E+N E L+ + Q A +F + LG+G FG+VY +
Sbjct: 3 QPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 521 VKKLEGIGQGKK-----EFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLD 575
K+ Q +K + R EV I + H ++++L G+ + T L E+ G++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 576 KWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVS 635
+ + K ++ D + A L+Y H +R+IH DIKPEN+LL K++
Sbjct: 123 RELQKLSK---FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 176
Query: 636 DFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
DFG + S TTL GT YL PE I EK D++S G++ E + G+ F+
Sbjct: 177 DFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
Query: 696 PN 697
N
Sbjct: 234 AN 235
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 30/274 (10%)
Query: 499 KLGQGGFGSVYQGVLPDGT-RLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV + +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHC 617
+ EFM G+L ++ + N++ ++ +A + + YL + + IH
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK---KNFIHR 381
Query: 618 DIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDV 677
++ N L+ +N+ KV+DFGL++LMT + + + APE + S KSDV
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 678 YSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ-S 732
+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 442 WAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGCP 484
Query: 733 DRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 485 EKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 515
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 30/274 (10%)
Query: 499 KLGQGGFGSVYQGVLPDGT-RLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV + +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHC 617
+ EFM G+L ++ + N++ ++ +A + + YL + + IH
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQ-EVNAVVLLYMATQISSAMEYLEK---KNFIHR 339
Query: 618 DIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDV 677
++ N L+ +N+ KV+DFGL++LMT + + + APE + S KSDV
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 678 YSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNIDEQ-S 732
+++G++L EI T + +P S ++++E+ D R+ E
Sbjct: 400 WAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERPEGCP 442
Query: 733 DRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 443 EKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 473
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 81 VVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 17/207 (8%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
KLG G FG V+ G + T++AVK L+ + F E +++ ++ H LV+L +
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
+ EFMA GSL ++ K ++ + + + A+G+AY+ + IH D
Sbjct: 79 EEPIYIITEFMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRD 134
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISEKS 675
++ NVL+ ++ K++DFGLA+++ + + +T G + + APE I + KS
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 676 DVYSYGMVLLEIIG-------GRKNFD 695
+V+S+G++L EI+ GR N D
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNAD 218
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 128/267 (47%), Gaps = 27/267 (10%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEG 559
+G+G FG V + +A+K++E + +K F E+ + ++H ++VKL G C
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESE-RKAFIVELRQLSRVNHPNIVKLYGACLNP 73
Query: 560 THRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDI 619
L E+ GSL + + L ++G+AYLH + +IH D+
Sbjct: 74 V--CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 131
Query: 620 KPENVLL-DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
KP N+LL K+ DFG A + Q+H+ T +G+ ++APE SEK DV+
Sbjct: 132 KPPNLLLVAGGTVLKICDFGTACDI---QTHM-TNNKGSAAWMAPEVFEGSNYSEKCDVF 187
Query: 679 SYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRL--NIDEQSDRVF 736
S+G++L E+I RK FD AF++M + N L N+ + + +
Sbjct: 188 SWGIILWEVITRRKPFD--------EIGGPAFRIM--WAVHNGTRPPLIKNLPKPIESLM 237
Query: 737 TAVKVALWCVQEDMSLRPSMTKVVQML 763
T C +D S RPSM ++V+++
Sbjct: 238 TR------CWSKDPSQRPSMEEIVKIM 258
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 38/278 (13%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY+GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ EFM G+L ++ + N++ E + L A ++ E +++ IH
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQ-----EVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISE 673
D+ N L+ +N+ KV+DFGL++LMT +T G + + APE + S
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMT---GDTYTAPAGAKFPIKWTAPESLAYNKFSI 193
Query: 674 KSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFP----SYAFKMMEEGKLRNILDSRLNID 729
KSDV+++G++L EI T + +P S ++++E+ D R+
Sbjct: 194 KSDVWAFGVLLWEIA----------TYGMSPYPGIDLSQVYELLEK-------DYRMERP 236
Query: 730 EQ-SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
E ++V+ ++ C Q + S RPS ++ Q E +
Sbjct: 237 EGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFETM 271
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 81 VVSEEPIYIVC-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 103/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 81 VVSEEPIYIVI-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/233 (30%), Positives = 121/233 (51%), Gaps = 30/233 (12%)
Query: 483 RFTYRDLQTATNN---FSVKLGQGGFGSVYQG-VLPDGTRLAVKKL-EGIGQGK------ 531
F L T +N + ++G+GGFG V++G ++ D + +A+K L G +G+
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 532 -KEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
+EF+ EV I+ +++H ++VKL G ++ EF+ G L + K + W
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHP--IKWS 122
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLL---DDNYH--AKVSDFGLAKLMTR 645
+ + L A G+ Y+ ++ + I+H D++ N+ L D+N AKV+DFG T
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TS 176
Query: 646 EQS-HVFTTLRGTRGYLAPEWI--TNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
+QS H + L G ++APE I + +EK+D YS+ M+L I+ G FD
Sbjct: 177 QQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 188 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 248 VVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNY 302
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGL +L+ + + +T +G + + APE
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 359
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 360 TIKSDVWSFGILLTEL 375
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 7 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 119
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 120 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 11 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 65
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 66 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 123
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 124 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 180
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 181 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 134/277 (48%), Gaps = 28/277 (10%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 19 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ + ++ SL + +F + + +IA TA+G+ YLH + II
Sbjct: 77 STK-PQLAIVTQWCEGSSLYHHLHASETKF--EMKKLIDIARQTARGMDYLHA---KSII 130
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA + +R SH F L G+ ++APE I +
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 190
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLR-NILDSRLNIDE 730
S +SDVY++G+VL E++ G+ + D+ +M+ G L ++ R N +
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ------IIEMVGRGSLSPDLSKVRSNCPK 244
Query: 731 QSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGIC 767
+ R+ C+++ RPS +++ +E +
Sbjct: 245 RMKRLMAE------CLKKKRDERPSFPRILAEIEELA 275
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 35 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 89
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 90 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 147
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 148 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 204
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 205 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 9 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 63
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 64 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 121
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 122 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 178
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 179 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 4 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 116
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 117 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 4 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 116
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 117 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 173
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 8 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 62
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 63 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 120
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 121 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 177
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 178 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 3 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 57
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 58 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 115
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 116 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 172
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 173 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 4 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 58
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 59 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 116
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 117 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKV 173
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 174 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 29/211 (13%)
Query: 499 KLGQGGFGSVYQG----VLP--DGTRLAVKKL-EGIGQGKKEFRAEVSIIGSIHHLHLVK 551
+LG+G FG V+ + P D +AVK L + +K+F E ++ ++ H H+VK
Sbjct: 20 ELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVK 79
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE----------TRFNIALGTAK 601
G C EG ++ +E+M +G L+K++ + +L E +IA A
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLM-----TREQSHVFTTLRG 656
G+ YL Q +H D+ N L+ +N K+ DFG+++ + R H +R
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR- 195
Query: 657 TRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++ PE I + +SDV+S G+VL EI
Sbjct: 196 ---WMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 116/227 (51%), Gaps = 15/227 (6%)
Query: 486 YRDLQTATNNFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRA---EVSIIG 542
Y +++ + S ++G G FG+VY+G +AVK L+ + ++F+A EV+++
Sbjct: 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLR 87
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
H++++ G+ + ++ ++ SL K + + +F + +IA TA+G
Sbjct: 88 KTRHVNILLFMGYMTKDNLAIVT-QWCEGSSLYKHLHVQETKFQMF--QLIDIARQTAQG 144
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYL 661
+ YLH + IIH D+K N+ L + K+ DFGLA + +R S G+ ++
Sbjct: 145 MDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWM 201
Query: 662 APEWIT---NYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
APE I N S +SDVYSYG+VL E++ G + D+ F
Sbjct: 202 APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIF 248
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 2 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 56
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 57 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 114
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 115 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 171
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 172 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 6/196 (3%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
KLG+G +GSVY+ + + ++ K + +E E+SI+ H+VK G +
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFK 95
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
T + E+ GS+ I +N+ D I T KGL YLH R IH D
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGLEYLH---FMRKIHRD 150
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
IK N+LL+ HAK++DFG+A +T + + GT ++APE I + +D++
Sbjct: 151 IKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVI-GTPFWMAPEVIQEIGYNCVADIW 209
Query: 679 SYGMVLLEIIGGRKNF 694
S G+ +E+ G+ +
Sbjct: 210 SLGITAIEMAEGKPPY 225
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 10 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 64
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 65 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 122
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 123 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 179
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 180 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 107/207 (51%), Gaps = 17/207 (8%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G + T++AVK L+ + F E +++ ++ H LV+L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
+ E+MA GSL ++ K ++ + + + A+G+AY+ + IH D
Sbjct: 80 EEPIYIITEYMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRD 135
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISEKS 675
++ NVL+ ++ K++DFGLA+++ + + +T G + + APE I + KS
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 676 DVYSYGMVLLEIIG-------GRKNFD 695
DV+S+G++L EI+ GR N D
Sbjct: 193 DVWSFGILLYEIVTYGKIPYPGRTNAD 219
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 120/232 (51%), Gaps = 28/232 (12%)
Query: 483 RFTYRDLQTATNN---FSVKLGQGGFGSVYQG-VLPDGTRLAVKKL-EGIGQGK------ 531
F L T +N + ++G+GGFG V++G ++ D + +A+K L G +G+
Sbjct: 7 EFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK 66
Query: 532 -KEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
+EF+ EV I+ +++H ++VKL G ++ EF+ G L + K + W
Sbjct: 67 FQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVM--EFVPCGDLYHRLLDKAHP--IKWS 122
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLL---DDNYH--AKVSDFGLAKLMTR 645
+ + L A G+ Y+ ++ + I+H D++ N+ L D+N AKV+DF L ++
Sbjct: 123 VKLRLMLDIALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL----SQ 177
Query: 646 EQSHVFTTLRGTRGYLAPEWI--TNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
+ H + L G ++APE I + +EK+D YS+ M+L I+ G FD
Sbjct: 178 QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 81 VVSEEPIYIVT-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D+ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M GSL ++ + ++ L +++ A G+AY+
Sbjct: 78 VVSEEPIYIVT-EYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER---MNY 132
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 189
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 190 TIKSDVWSFGILLTEL 205
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 5/193 (2%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ GSL ++ + ++ L ++A A G+AY+
Sbjct: 81 VVSEEPIYIVI-EYMSKGSLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
+H D++ N+L+ +N KV+DFGLA+L+ + + + APE + K
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIK 195
Query: 675 SDVYSYGMVLLEI 687
SDV+S+G++L E+
Sbjct: 196 SDVWSFGILLTEL 208
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G + K + K ++ D + A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANA 125
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S TTL GT YL
Sbjct: 126 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLP 179
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 5 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 59
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ K + +D
Sbjct: 60 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKL 117
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH ++ N+L+++ K+ DFGL K++ +++ +
Sbjct: 118 LQYTSQICKGMEYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKV 174
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 175 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ G L ++ + ++ L ++A A G+AY+
Sbjct: 81 VVSEEPIYIVT-EYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 20/218 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSV---YQGVLPD--GTRLAVKKLEGIG-QGKKEF 534
P F R L+ + +LG+G FGSV L D G +AVK+L+ G +++F
Sbjct: 5 PTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 59
Query: 535 RAEVSIIGSIHHLHLVKLRGFC-AEGTHRL-LAYEFMANGSLDKWIFKKNQEFLLDWETR 592
+ E+ I+ ++H +VK RG G L L E++ +G L F + LD
Sbjct: 60 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD--FLQRHRARLDASRL 117
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
+ KG+ YL +R +H D+ N+L++ H K++DFGLAKL+ ++ +
Sbjct: 118 LLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 174
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEII 688
G + APE +++ S +SDV+S+G+VL E+
Sbjct: 175 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 212
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 20/218 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSV---YQGVLPD--GTRLAVKKLEGIG-QGKKEF 534
P F R L+ + +LG+G FGSV L D G +AVK+L+ G +++F
Sbjct: 4 PTIFEERHLK-----YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 58
Query: 535 RAEVSIIGSIHHLHLVKLRGFC-AEGTHRL-LAYEFMANGSLDKWIFKKNQEFLLDWETR 592
+ E+ I+ ++H +VK RG G L L E++ +G L F + LD
Sbjct: 59 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD--FLQRHRARLDASRL 116
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
+ KG+ YL +R +H D+ N+L++ H K++DFGLAKL+ ++ +
Sbjct: 117 LLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 173
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEII 688
G + APE +++ S +SDV+S+G+VL E+
Sbjct: 174 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 18 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M GSL ++ + ++ L +++ A G+AY+
Sbjct: 78 VVSEEPIYIVT-EYMNKGSLLDFLKGETGKY-LRLPQLVDMSAQIASGMAYVER---MNY 132
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEWTARQGAKFPIKWTAPEAALYGRF 189
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 190 TIKSDVWSFGILLTEL 205
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 20/218 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSV---YQGVLPD--GTRLAVKKLEGIG-QGKKEF 534
P F R L+ + +LG+G FGSV L D G +AVK+L+ G +++F
Sbjct: 17 PTIFEERHLK-----YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 71
Query: 535 RAEVSIIGSIHHLHLVKLRGFC-AEGTHRL-LAYEFMANGSLDKWIFKKNQEFLLDWETR 592
+ E+ I+ ++H +VK RG G L L E++ +G L F + LD
Sbjct: 72 QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRD--FLQRHRARLDASRL 129
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
+ KG+ YL +R +H D+ N+L++ H K++DFGLAKL+ ++ +
Sbjct: 130 LLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVV 186
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEII 688
G + APE +++ S +SDV+S+G+VL E+
Sbjct: 187 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 102/196 (52%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
VKLGQG FG V+ G TR+A+K L+ + F E ++ + H LV+L
Sbjct: 21 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E ++ E+M+ G L ++ + ++ L ++A A G+AY+
Sbjct: 81 VVSEEPIYIVM-EYMSKGCLLDFLKGEMGKY-LRLPQLVDMAAQIASGMAYVER---MNY 135
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D++ N+L+ +N KV+DFGLA+L+ + + +T +G + + APE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI---EDNEYTARQGAKFPIKWTAPEAALYGRF 192
Query: 672 SEKSDVYSYGMVLLEI 687
+ KSDV+S+G++L E+
Sbjct: 193 TIKSDVWSFGILLTEL 208
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 105/193 (54%), Gaps = 11/193 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
KLG G FG V+ T++AVK ++ + F AE +++ ++ H LVKL +
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 81
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ EFMA GSL ++ K ++ + + A+G+A++ + + IH D
Sbjct: 82 EPIYIIT-EFMAKGSLLDFL-KSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRD 136
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISEKS 675
++ N+L+ + K++DFGLA+++ + + +T G + + APE I + + KS
Sbjct: 137 LRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 676 DVYSYGMVLLEII 688
DV+S+G++L+EI+
Sbjct: 194 DVWSFGILLMEIV 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 109/235 (46%), Gaps = 16/235 (6%)
Query: 470 EDNFLENLSGMPVRFTYRDLQTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGI 527
E+N E L+ + Q A +F + LG+G FG+VY + K+
Sbjct: 1 ENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK 60
Query: 528 GQGKK-----EFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKN 582
Q +K + R EV I + H ++++L G+ + T L E+ G++ + + K +
Sbjct: 61 AQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS 120
Query: 583 QEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKL 642
+ D + A L+Y H +R+IH DIKPEN+LL K++DFG +
Sbjct: 121 K---FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS-- 172
Query: 643 MTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
S TTL GT YL PE I EK D++S G++ E + G+ F+ N
Sbjct: 173 -VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 226
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 105/193 (54%), Gaps = 11/193 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
KLG G FG V+ T++AVK ++ + F AE +++ ++ H LVKL +
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 254
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ EFMA GSL ++ K ++ + + A+G+A++ + + IH D
Sbjct: 255 EPIYIIT-EFMAKGSLLDFL-KSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRD 309
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISEKS 675
++ N+L+ + K++DFGLA+++ + + +T G + + APE I + + KS
Sbjct: 310 LRAANILVSASLVCKIADFGLARVI---EDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 676 DVYSYGMVLLEII 688
DV+S+G++L+EI+
Sbjct: 367 DVWSFGILLMEIV 379
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 28/277 (10%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 31 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ + ++ SL + +F + + +IA TA+G+ YLH + II
Sbjct: 89 STK-PQLAIVTQWCEGSSLYHHLHASETKF--EMKKLIDIARQTARGMDYLHA---KSII 142
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA +R SH F L G+ ++APE I +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLR-NILDSRLNIDE 730
S +SDVY++G+VL E++ G+ + D+ +M+ G L ++ R N +
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ------IIEMVGRGSLSPDLSKVRSNCPK 256
Query: 731 QSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGIC 767
+ R+ C+++ RPS +++ +E +
Sbjct: 257 RMKRLMAE------CLKKKRDERPSFPRILAEIEELA 287
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 132/277 (47%), Gaps = 28/277 (10%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 31 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ ++ SL + +F + + +IA TA+G+ YLH + II
Sbjct: 89 ST-APQLAIVTQWCEGSSLYHHLHASETKF--EMKKLIDIARQTARGMDYLHA---KSII 142
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA +R SH F L G+ ++APE I +
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPY 202
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLR-NILDSRLNIDE 730
S +SDVY++G+VL E++ G+ + D+ +M+ G L ++ R N +
Sbjct: 203 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQ------IIEMVGRGSLSPDLSKVRSNCPK 256
Query: 731 QSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGIC 767
+ R+ C+++ RPS +++ +E +
Sbjct: 257 RMKRLMAE------CLKKKRDERPSFPRILAEIEELA 287
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCA 557
KLG G +G VY GV +AVK L+ +EF E +++ I H +LV+L G C
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-IIH 616
+ E+M G+L ++ + N+E E + L A ++ E +++ IH
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNRE-----EVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
D+ N L+ +N+ KV+DFGL++LMT + + + APE + S KSD
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSD 213
Query: 677 VYSYGMVLLEI 687
V+++G++L EI
Sbjct: 214 VWAFGVLLWEI 224
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S TTL GT YL
Sbjct: 121 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLP 174
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSV---YQGVLPD--GTRLAVKKLEGIG-QGKKEF 534
P F R L+ + +LG+G FGSV L D G +AVK+L+ G +++F
Sbjct: 1 PTIFEERHLKYIS-----QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDF 55
Query: 535 RAEVSIIGSIHHLHLVKLRGFC-AEGTHRL-LAYEFMANGSLDKWIFKKNQEFLLDWETR 592
+ E+ I+ ++H +VK RG G L L E++ +G L F + LD
Sbjct: 56 QREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRD--FLQRHRARLDASRL 113
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
+ KG+ YL +R +H D+ N+L++ H K++DFGLAKL+ ++
Sbjct: 114 LLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVV 170
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +++ S +SDV+S+G+VL E+
Sbjct: 171 REPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 207
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 121
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S TTL GT YL
Sbjct: 122 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---CHAPSSRRTTLSGTLDYLP 175
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 123
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S TTL GT YL
Sbjct: 124 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLP 177
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 125
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S TTL GT YL
Sbjct: 126 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLP 179
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 496 FSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEFRAEVSIIGSIHHLHL 549
F +LG+G FGSV L D G +AVKKL+ + ++F E+ I+ S+ H ++
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 550 VKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLH 607
VK +G C R L E++ GSL ++ K + +D KG+ YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL- 148
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG--YLAPEW 665
+R IH D+ N+L+++ K+ DFGL K++ +++ G + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 666 ITNYAISEKSDVYSYGMVLLEI 687
+T S SDV+S+G+VL E+
Sbjct: 207 LTESKFSVASDVWSFGVVLYEL 228
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 15/202 (7%)
Query: 496 FSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEFRAEVSIIGSIHHLHL 549
F +LG+G FGSV L D G +AVKKL+ + ++F E+ I+ S+ H ++
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 550 VKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLH 607
VK +G C R L E++ GSL ++ K + +D KG+ YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTSQICKGMEYL- 148
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG--YLAPEW 665
+R IH D+ N+L+++ K+ DFGL K++ +++ G + APE
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 206
Query: 666 ITNYAISEKSDVYSYGMVLLEI 687
+T S SDV+S+G+VL E+
Sbjct: 207 LTESKFSVASDVWSFGVVLYEL 228
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 17/205 (8%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVK-KLEGI-------GQGKKEFRAEVSIIGSIHHLHLV 550
KLG GG +VY L + T L +K ++ I + K F EV + H ++V
Sbjct: 18 KLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
+ E L E++ +L ++I L +T N G+ + H
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAH--- 128
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
D RI+H DIKP+N+L+D N K+ DFG+AK ++ + GT Y +PE A
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFD 695
E +D+YS G+VL E++ G F+
Sbjct: 189 TDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 106/217 (48%), Gaps = 20/217 (9%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQ---GVLPD--GTRLAVKKLE-GIGQGKKEF 534
P +F R L+ F +LG+G FGSV L D G +AVKKL+ + ++F
Sbjct: 7 PTQFEERHLK-----FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDF 61
Query: 535 RAEVSIIGSIHHLHLVKLRGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETR 592
E+ I+ S+ H ++VK +G C R L E++ GSL ++ + +D
Sbjct: 62 EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAER--IDHIKL 119
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
KG+ YL +R IH D+ N+L+++ K+ DFGL K++ +++
Sbjct: 120 LQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKV 176
Query: 653 TLRGTRG--YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G + APE +T S SDV+S+G+VL E+
Sbjct: 177 KEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 119
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S TTL GT YL
Sbjct: 120 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLP 173
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 174 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 124
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S TTL GT YL
Sbjct: 125 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLP 178
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 179 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 125
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S TTL GT YL
Sbjct: 126 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLP 179
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 180 PEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 123
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S TTL GT YL
Sbjct: 124 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLDYLP 177
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 108/218 (49%), Gaps = 22/218 (10%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTR---LAVK-----KLEGIGQGKKEFRAEVS 539
Q A +F + LG+G FG+VY + + R LA+K +LE G + + R EV
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVY--LAREKQRKFILALKVLFKAQLEKAGV-EHQLRREVE 57
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT 599
I + H ++++L G+ + T L E+ G++ + + K ++ D +
Sbjct: 58 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITEL 114
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG 659
A L+Y H +R+IH DIKPEN+LL K++DFG + S TTL GT
Sbjct: 115 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTTLCGTLD 168
Query: 660 YLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
YL PE I EK D++S G++ E + G+ F+ N
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 206
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 32/214 (14%)
Query: 499 KLGQGGFGSVYQGV------LPDGTRLAVKKLEG-IGQGKKEFRAEVSIIGSIHHLHLVK 551
+LG+G FG V+ D +AVK L+ +K+F+ E ++ ++ H H+VK
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQE--FLLDWETR-----------FNIALG 598
G C +G ++ +E+M +G L+K++ + L+D + R +IA
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLM-----TREQSHVFTT 653
A G+ YL Q +H D+ N L+ N K+ DFG+++ + R H
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 654 LRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
+R ++ PE I + +SDV+S+G++L EI
Sbjct: 199 IR----WMPPESIMYRKFTTESDVWSFGVILWEI 228
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 110/242 (45%), Gaps = 16/242 (6%)
Query: 463 SPQETSEEDNFLENLSGMPVRFTYRDLQTATNNFSV--KLGQGGFGSVYQGVLPDGTRLA 520
P ++ E+N E L+ + Q A +F + LG+G FG+VY +
Sbjct: 3 QPLPSAPENNPEEELASKQKNEESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL 62
Query: 521 VKKLEGIGQGKK-----EFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLD 575
K+ Q +K + R EV I + H ++++L G+ + T L E+ G++
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 576 KWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVS 635
+ + K ++ D + A L+Y H +R+IH DIKPEN+LL K++
Sbjct: 123 RELQKLSK---FDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 176
Query: 636 DFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
DFG + S L GT YL PE I EK D++S G++ E + G+ F+
Sbjct: 177 DFGWS---VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
Query: 696 PN 697
N
Sbjct: 234 AN 235
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 99/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G + K + K ++ D + A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANA 125
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S L GT YL
Sbjct: 126 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLXGTLDYLP 179
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S T L GT YL
Sbjct: 121 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTELCGTLDYLP 174
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 122
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K+++FG + S TTL GT YL
Sbjct: 123 LSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLP 176
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 495 NFSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIH 545
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 22 TMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFN 80
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALG 598
H+V+L G ++G L+ E M G L ++ E + +A
Sbjct: 81 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR 658
A G+AYL+ + + +H D+ N ++ +++ K+ DFG MTR+ +G +
Sbjct: 141 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIXETDXXRKGGK 193
Query: 659 G-----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G +++PE + + + SDV+S+G+VL EI
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 29/213 (13%)
Query: 496 FSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHH 546
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 14 MSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFNC 72
Query: 547 LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGT 599
H+V+L G ++G L+ E M G L ++ E + +A
Sbjct: 73 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 132
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG 659
A G+AYL+ + + +H D+ N ++ +++ K+ DFG MTR+ +G +G
Sbjct: 133 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIXETDXXRKGGKG 185
Query: 660 -----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
+++PE + + + SDV+S+G+VL EI
Sbjct: 186 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 121
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S TL GT YL
Sbjct: 122 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLCGTLDYLP 175
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 121
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S T L GT YL
Sbjct: 122 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLP 175
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 500 LGQGGFGSV-----YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+G FG V Y+ + ++L E+S + + H H++KL
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
T ++ E+ A G L +I +K + D RF + A + Y H +I
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKR-MTEDEGRRFFQQIICA--IEYCHR---HKI 129
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN--YAIS 672
+H D+KPEN+LLDDN + K++DFGL+ +MT + T G+ Y APE I YA
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVINGKLYAGP 187
Query: 673 EKSDVYSYGMVLLEIIGGRKNFD 695
E DV+S G+VL ++ GR FD
Sbjct: 188 E-VDVWSCGIVLYVMLVGRLPFD 209
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 27/209 (12%)
Query: 499 KLGQGGFGSVYQGVLPD------GTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHHLHLV 550
+LGQG FG VY+G D TR+AVK + ++ EF E S++ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGTAKGL 603
+L G ++G L+ E MA+G L ++ E + + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG---- 659
AYL+ ++ +H D+ N ++ ++ K+ DFG MTR+ +G +G
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 196
Query: 660 -YLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE + + + SD++S+G+VL EI
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 27/209 (12%)
Query: 499 KLGQGGFGSVYQGVLPD------GTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHHLHLV 550
+LGQG FG VY+G D TR+AVK + ++ EF E S++ H+V
Sbjct: 21 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 80
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGTAKGL 603
+L G ++G L+ E MA+G L ++ E + + +A A G+
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG---- 659
AYL+ ++ +H D+ N ++ ++ K+ DFG MTR+ +G +G
Sbjct: 141 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 193
Query: 660 -YLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE + + + SD++S+G+VL EI
Sbjct: 194 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S T L GT YL
Sbjct: 121 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLP 174
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 27/209 (12%)
Query: 499 KLGQGGFGSVYQGVLPD------GTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHHLHLV 550
+LGQG FG VY+G D TR+AVK + ++ EF E S++ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGTAKGL 603
+L G ++G L+ E MA+G L ++ E + + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG---- 659
AYL+ ++ +H D+ N ++ ++ K+ DFG MTR+ +G +G
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIXETDXXRKGGKGLLPV 196
Query: 660 -YLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE + + + SD++S+G+VL EI
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 123
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K+++FG + S TTL GT YL
Sbjct: 124 LSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWS---VHAPSSRRTTLCGTLDYLP 177
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 125
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S T L GT YL
Sbjct: 126 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLP 179
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 180 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S T L GT YL
Sbjct: 121 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTDLCGTLDYLP 174
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 15/214 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 20 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ ++ ++ SL + +F + +IA TA+G+ YLH + II
Sbjct: 78 STKPQLAIVT-QWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSII 131
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA + +R SH F L G+ ++APE I
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
S +SDVY++G+VL E++ G+ + D+ F
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 225
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 30/270 (11%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEG 559
+G+G FG V G G ++AVK ++ + F AE S++ + H +LV+L G E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 560 THRL-LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
L + E+MA GSL ++ + + +L + +L + + YL + +H D
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 133
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
+ NVL+ ++ AKVSDFGL T+E S T + + APE + A S KSDV+
Sbjct: 134 LAARNVLVSEDNVAKVSDFGL----TKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVW 189
Query: 679 SYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDRVFT 737
S+G++L EI GR + D +KM + D
Sbjct: 190 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-----------------DAPDGCPP 232
Query: 738 AV-KVALWCVQEDMSLRPSMTKVVQMLEGI 766
AV +V C D ++RPS ++ + LE I
Sbjct: 233 AVYEVMKNCWHLDAAMRPSFLQLREQLEHI 262
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S T L GT YL
Sbjct: 121 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRTXLCGTLDYLP 174
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 15/214 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ ++ ++ SL + +F + +IA TA+G+ YLH + II
Sbjct: 73 STKPQLAIVT-QWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA + +R SH F L G+ ++APE I
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
S +SDVY++G+VL E++ G+ + D+ F
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 220
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 15/214 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 17 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ ++ ++ SL + +F + +IA TA+G+ YLH + II
Sbjct: 75 STKPQLAIVT-QWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSII 128
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA + +R SH F L G+ ++APE I
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
S +SDVY++G+VL E++ G+ + D+ F
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 222
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 15/214 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ + ++ SL + +F + +IA TA+G+ YLH + II
Sbjct: 73 -STAPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA + +R SH F L G+ ++APE I
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
S +SDVY++G+VL E++ G+ + D+ F
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 220
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 105/207 (50%), Gaps = 19/207 (9%)
Query: 500 LGQGGFGSVYQGV-LPDGTRL----AVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVKL 552
LG G FG+VY+G+ +PDG + A+K L K KE E ++ + ++ +L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G C T +L+ + M G L + + L + N + AKG++YL D
Sbjct: 85 LGICLTSTVQLVT-QLMPYGCLLDHV--RENRGRLGSQDLLNWCMQIAKGMSYLE---DV 138
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNY 669
R++H D+ NVL+ H K++DFGLA+L+ +++ G + ++A E I
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHAD--GGKVPIKWMALESILRR 196
Query: 670 AISEKSDVYSYGMVLLEIIG-GRKNFD 695
+ +SDV+SYG+ + E++ G K +D
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 15/214 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 20 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ ++ ++ SL + +F + +IA TA+G+ YLH + II
Sbjct: 78 STKPQLAIVT-QWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSII 131
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA + +R SH F L G+ ++APE I
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
S +SDVY++G+VL E++ G+ + D+ F
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 225
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 16/204 (7%)
Query: 500 LGQGGFGSVY-----QGVLPDGTRLAVK-KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG+G FG+VY Q ++ K +LE G + + R EV I + H ++++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 78
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G+ + T L E+ G++ + + K ++ D + A L+Y H +R
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYITELANALSYCH---SKR 132
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISE 673
+IH DIKPEN+LL N K++DFG + S TTL GT YL PE I E
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDE 189
Query: 674 KSDVYSYGMVLLEIIGGRKNFDPN 697
K D++S G++ E + G F+ +
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAH 213
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 15/214 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 42 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ ++ ++ SL + +F + +IA TA+G+ YLH + II
Sbjct: 100 STKPQLAIVT-QWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSII 153
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA + +R SH F L G+ ++APE I
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
S +SDVY++G+VL E++ G+ + D+ F
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 247
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 29/213 (13%)
Query: 496 FSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHH 546
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 22 MSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFNC 80
Query: 547 LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGT 599
H+V+L G ++G L+ E M G L ++ E + +A
Sbjct: 81 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 140
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG 659
A G+AYL+ + + +H D+ N ++ +++ K+ DFG MTR+ +G +G
Sbjct: 141 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKG 193
Query: 660 -----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
+++PE + + + SDV+S+G+VL EI
Sbjct: 194 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 25/221 (11%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVL-PDG----TRLAVKKL--EGIGQGKKE 533
P F R L+ + LG+G FG V P+G ++AVK L E G +
Sbjct: 15 PTHFEKRFLKRIRD-----LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD 69
Query: 534 FRAEVSIIGSIHHLHLVKLRGFCAE--GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET 591
+ E+ I+ +++H ++VK +G C E G L EF+ +GSL +++ K + L +
Sbjct: 70 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 129
Query: 592 RFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVF 651
++ A+ KG+ YL ++ +H D+ NVL++ + K+ DFGL K + E
Sbjct: 130 KY--AVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI--ETDKEX 182
Query: 652 TTLRGTRG----YLAPEWITNYAISEKSDVYSYGMVLLEII 688
T++ R + APE + SDV+S+G+ L E++
Sbjct: 183 XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 223
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 15/214 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 43 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ + ++ SL + +F + +IA TA+G+ YLH + II
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSII 154
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA + +R SH F L G+ ++APE I
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
S +SDVY++G+VL E++ G+ + D+ F
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 248
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 27/209 (12%)
Query: 499 KLGQGGFGSVYQGVLPD------GTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHHLHLV 550
+LGQG FG VY+G D TR+AVK + ++ EF E S++ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGTAKGL 603
+L G ++G L+ E MA+G L ++ E + + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG---- 659
AYL+ ++ +H D+ N ++ ++ K+ DFG MTR+ +G +G
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETAYYRKGGKGLLPV 196
Query: 660 -YLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE + + + SD++S+G+VL EI
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 495 NFSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIH 545
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 22 TMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFN 80
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALG 598
H+V+L G ++G L+ E M G L ++ E + +A
Sbjct: 81 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR 658
A G+AYL+ + + +H D+ N ++ +++ K+ DFG MTR+ +G +
Sbjct: 141 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGK 193
Query: 659 G-----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G +++PE + + + SDV+S+G+VL EI
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 23/249 (9%)
Query: 460 APESPQETSEEDNFLENLSGMPVRFTYRDLQTATNNF---SVKLGQGGFGSVYQGVLPDG 516
+P+ P+ + + E+ P + L +N ++LG G FGSV QGV
Sbjct: 301 SPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGSVRQGVYRMR 360
Query: 517 TRLAVKKLEGIGQGKK-----EFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMAN 571
+ ++ + QG + E E I+ + + ++V+L G C + +L E
Sbjct: 361 KKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGG 419
Query: 572 GSLDKWIFKKNQEFLLDWETRFNIA---LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDD 628
G L K++ K +E + N+A + G+ YL E + +H ++ NVLL +
Sbjct: 420 GPLHKFLVGKREEIPVS-----NVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVN 471
Query: 629 NYHAKVSDFGLAKLMTREQSHVFTTLRGT--RGYLAPEWITNYAISEKSDVYSYGMVLLE 686
++AK+SDFGL+K + + S+ G + APE I S +SDV+SYG+ + E
Sbjct: 472 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 531
Query: 687 IIG-GRKNF 694
+ G+K +
Sbjct: 532 ALSYGQKPY 540
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 29/213 (13%)
Query: 496 FSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHH 546
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 29 MSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFNC 87
Query: 547 LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGT 599
H+V+L G ++G L+ E M G L ++ E + +A
Sbjct: 88 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 147
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG 659
A G+AYL+ + + +H D+ N ++ +++ K+ DFG MTR+ +G +G
Sbjct: 148 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKG 200
Query: 660 -----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
+++PE + + + SDV+S+G+VL EI
Sbjct: 201 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 123
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S L GT YL
Sbjct: 124 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLP 177
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 25/221 (11%)
Query: 481 PVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVL-PDG----TRLAVKKL--EGIGQGKKE 533
P F R L+ + LG+G FG V P+G ++AVK L E G +
Sbjct: 3 PTHFEKRFLKRIRD-----LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD 57
Query: 534 FRAEVSIIGSIHHLHLVKLRGFCAE--GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET 591
+ E+ I+ +++H ++VK +G C E G L EF+ +GSL +++ K + L +
Sbjct: 58 LKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQL 117
Query: 592 RFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVF 651
++ A+ KG+ YL ++ +H D+ NVL++ + K+ DFGL K + E
Sbjct: 118 KY--AVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI--ETDKEX 170
Query: 652 TTLRGTRG----YLAPEWITNYAISEKSDVYSYGMVLLEII 688
T++ R + APE + SDV+S+G+ L E++
Sbjct: 171 XTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL 211
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 495 NFSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIH 545
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 19 TMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFN 77
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALG 598
H+V+L G ++G L+ E M G L ++ E + +A
Sbjct: 78 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 137
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR 658
A G+AYL+ + + +H D+ N ++ +++ K+ DFG MTR+ +G +
Sbjct: 138 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGK 190
Query: 659 G-----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G +++PE + + + SDV+S+G+VL EI
Sbjct: 191 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 495 NFSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIH 545
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 15 TMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFN 73
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALG 598
H+V+L G ++G L+ E M G L ++ E + +A
Sbjct: 74 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR 658
A G+AYL+ + + +H D+ N ++ +++ K+ DFG MTR+ +G +
Sbjct: 134 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGK 186
Query: 659 G-----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G +++PE + + + SDV+S+G+VL EI
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 495 NFSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIH 545
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 21 TMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFN 79
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALG 598
H+V+L G ++G L+ E M G L ++ E + +A
Sbjct: 80 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR 658
A G+AYL+ + + +H D+ N ++ +++ K+ DFG MTR+ +G +
Sbjct: 140 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGK 192
Query: 659 G-----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G +++PE + + + SDV+S+G+VL EI
Sbjct: 193 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 107/221 (48%), Gaps = 39/221 (17%)
Query: 500 LGQGGFGSVYQ----GVLP--DGTRLAVKKL--EGIGQGKKEFRAEVSIIGSIHHLHLVK 551
+G+G FG V+Q G+LP T +AVK L E + +F+ E +++ + ++VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL-----DWETR-------------- 592
L G CA G L +E+MA G L++++ + + D TR
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 593 --FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
IA A G+AYL E ++ +H D+ N L+ +N K++DFGL++ + S
Sbjct: 175 EQLCIARQVAAGMAYLSE---RKFVHRDLATRNCLVGENMVVKIADFGLSRNI---YSAD 228
Query: 651 FTTLRGTRG----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
+ G ++ PE I + +SDV++YG+VL EI
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI 269
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 16/219 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + + K+ Q +K + R EV I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +++IH DIKPEN+LL K++DFG + S L GT YL
Sbjct: 121 LSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLP 174
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSD 701
PE I EK D++S G++ E + G+ F+ N D
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQD 213
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 29/213 (13%)
Query: 496 FSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHH 546
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 51 MSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFNC 109
Query: 547 LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGT 599
H+V+L G ++G L+ E M G L ++ E + +A
Sbjct: 110 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI 169
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG 659
A G+AYL+ + + +H D+ N ++ +++ K+ DFG MTR+ +G +G
Sbjct: 170 ADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGKG 222
Query: 660 -----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
+++PE + + + SDV+S+G+VL EI
Sbjct: 223 LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S L GT YL
Sbjct: 121 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRAALCGTLDYLP 174
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 122
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S L GT YL
Sbjct: 123 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLP 176
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 177 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 106/211 (50%), Gaps = 19/211 (9%)
Query: 500 LGQGGFGSVY---QGVLPDGTRL----AVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
LGQG FG V+ + PD L +KK + + + E I+ ++H +VKL
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 553 R-GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
F EG L+ +F+ G L + K + + + +F +A A GL +LH
Sbjct: 96 HYAFQTEGKLYLIL-DFLRGGDLFTRLSK--EVMFTEEDVKFYLA-ELALGLDHLHSLG- 150
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
II+ D+KPEN+LLD+ H K++DFGL+K + ++ GT Y+APE +
Sbjct: 151 --IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFC-GTVEYMAPEVVNRQGH 207
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF---DPNET 699
S +D +SYG+++ E++ G F D ET
Sbjct: 208 SHSADWWSYGVLMFEMLTGSLPFQGKDRKET 238
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 495 NFSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIH 545
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 28 TMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFN 86
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFK-----KNQEFLL--DWETRFNIALG 598
H+V+L G ++G L+ E M G L ++ N L +A
Sbjct: 87 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 146
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR 658
A G+AYL+ + + +H D+ N ++ +++ K+ DFG MTR+ +G +
Sbjct: 147 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGK 199
Query: 659 G-----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G +++PE + + + SDV+S+G+VL EI
Sbjct: 200 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 27/209 (12%)
Query: 499 KLGQGGFGSVYQGVLPD------GTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHHLHLV 550
+LGQG FG VY+G D TR+AVK + ++ EF E S++ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGTAKGL 603
+L G ++G L+ E MA+G L ++ E + + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG---- 659
AYL+ ++ +H D+ N ++ ++ K+ DFG MTR+ +G +G
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 196
Query: 660 -YLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE + + + SD++S+G+VL EI
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 102/209 (48%), Gaps = 27/209 (12%)
Query: 499 KLGQGGFGSVYQGVLPD------GTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHHLHLV 550
+LGQG FG VY+G D TR+AVK + ++ EF E S++ H+V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGTAKGL 603
+L G ++G L+ E MA+G L ++ E + + +A A G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG---- 659
AYL+ ++ +H D+ N ++ ++ K+ DFG MTR+ +G +G
Sbjct: 143 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 195
Query: 660 -YLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE + + + SD++S+G+VL EI
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 224
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 15/214 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 15 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ ++ ++ SL + +F + +IA TA+G+ YLH + II
Sbjct: 73 STKPQLAIVT-QWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSII 126
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA +R SH F L G+ ++APE I
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
S +SDVY++G+VL E++ G+ + D+ F
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 220
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V+ G T++A+K L+ + F E I+ + H LV+L +E
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETR-------FNIALGTAKGLAYLHEDCD 611
++ E+M GSL +FL D E R ++A A G+AY+
Sbjct: 76 EPIYIVT-EYMNKGSL--------LDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER--- 123
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
IH D++ N+L+ + K++DFGLA+L+ + + + APE
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRF 183
Query: 672 SEKSDVYSYGMVLLEII 688
+ KSDV+S+G++L E++
Sbjct: 184 TIKSDVWSFGILLTELV 200
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 456 KKRKAPESPQETSEEDNFLENLSGMPVRFTYRDLQTATNNFSVKLGQGGFGSV-YQGVLP 514
+K P SPQ + + + + + + D ++ +NF +K+G+G G V V
Sbjct: 116 EKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNF-IKIGEGSTGIVCIATVRS 174
Query: 515 DGTRLAVKKLEGIGQGKKEFR-AEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGS 573
G +AVKK++ Q ++E EV I+ H ++V++ G + EF+ G+
Sbjct: 175 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234
Query: 574 LDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAK 633
L + ++ E + L + L+ LH Q +IH DIK +++LL + K
Sbjct: 235 LTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 287
Query: 634 VSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKN 693
+SDFG +++E L GT ++APE I+ + D++S G++++E++ G
Sbjct: 288 LSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
Query: 694 FDPNETSDKAHFPSYAFKMMEEG---KLRNI 721
+ NE P A KM+ + +L+N+
Sbjct: 347 YF-NEP------PLKAMKMIRDNLPPRLKNL 370
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 499 KLGQGGFGSVYQ-GVLPDGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+LG G G V++ P G +A K LE + + E+ ++ + ++V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ E M GSLD+ + K + + + +++ KGL YL E +I+
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIM 127
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+L++ K+ DFG++ + ++ F GTR Y++PE + S +S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 184
Query: 676 DVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMME 714
D++S G+ L+E+ GR P + + + P F++++
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLD 223
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 104/214 (48%), Gaps = 29/214 (13%)
Query: 495 NFSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIH 545
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 18 TMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFN 76
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFK-----KNQEFLL--DWETRFNIALG 598
H+V+L G ++G L+ E M G L ++ N L +A
Sbjct: 77 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGE 136
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR 658
A G+AYL+ + + +H D+ N ++ +++ K+ DFG MTR+ +G +
Sbjct: 137 IADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFG----MTRDIYETDYYRKGGK 189
Query: 659 G-----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G +++PE + + + SDV+S+G+VL EI
Sbjct: 190 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 103/208 (49%), Gaps = 20/208 (9%)
Query: 498 VKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIGSIHHLHLVKL 552
++LG G FGSV QGV + ++ + QG + E E I+ + + ++V+L
Sbjct: 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIA---LGTAKGLAYLHED 609
G C + +L E G L K++ K +E + N+A + G+ YL E
Sbjct: 76 IGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS-----NVAELLHQVSMGMKYLEE- 128
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT--RGYLAPEWIT 667
+ +H D+ NVLL + ++AK+SDFGL+K + + S+ G + APE I
Sbjct: 129 --KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 186
Query: 668 NYAISEKSDVYSYGMVLLEIIG-GRKNF 694
S +SDV+SYG+ + E + G+K +
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 110
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ YL
Sbjct: 111 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYL 167
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ + G + ++A
Sbjct: 168 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 224
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELM 249
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 111
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ YL
Sbjct: 112 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYL 168
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ + G + ++A
Sbjct: 169 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 225
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELM 250
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRA-EVSIIGSIHHLHLVKLRGFC 556
K+GQG G+VY + + G +A++++ Q KKE E+ ++ + ++V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
G + E++A GSL + E +D + + L +LH + ++IH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
DIK +N+LL + K++DFG +T EQS +T+ GT ++APE +T A K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 677 VYSYGMVLLEIIGGRKNF 694
++S G++ +E+I G +
Sbjct: 199 IWSLGIMAIEMIEGEPPY 216
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 14/207 (6%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 40 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 99
Query: 550 VKLRGFCAEGTHRL-LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
VKL FC + +L + NG L K+I K + TRF A L YLH
Sbjct: 100 VKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH- 154
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWIT 667
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 155 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 668 NYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 120
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S L GT YL
Sbjct: 121 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLP 174
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 175 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 100/190 (52%), Gaps = 15/190 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
KLG G FG V+ T++AVK ++ + F AE +++ ++ H LVKL +
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTK 248
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
++ EFMA GSL ++ K ++ + + A+G+A++ + + IH D
Sbjct: 249 EPIYIIT-EFMAKGSLLDFL-KSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRD 303
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
++ N+L+ + K++DFGLA++ + F + APE I + + KSDV+
Sbjct: 304 LRAANILVSASLVCKIADFGLARVGAK-----FPI-----KWTAPEAINFGSFTIKSDVW 353
Query: 679 SYGMVLLEII 688
S+G++L+EI+
Sbjct: 354 SFGILLMEIV 363
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 84
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ YL
Sbjct: 85 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYL 141
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ + G + ++A
Sbjct: 142 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 198
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELM 223
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ YL
Sbjct: 93 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ + G + ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 15/214 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 35 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ ++ ++ SL + +F + +IA TA+G+ YLH + II
Sbjct: 93 STKPQLAIVT-QWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSII 146
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA +R SH F L G+ ++APE I
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
S +SDVY++G+VL E++ G+ + D+ F
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 240
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 21/271 (7%)
Query: 456 KKRKAPESPQETSEEDNFLENLSGMPVRFTYRDLQTATNNFSVKLGQGGFGSV-YQGVLP 514
+K P SPQ + + + + + + D ++ +NF +K+G+G G V V
Sbjct: 39 EKPPGPRSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNF-IKIGEGSTGIVCIATVRS 97
Query: 515 DGTRLAVKKLEGIGQGKKEFR-AEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGS 573
G +AVKK++ Q ++E EV I+ H ++V++ G + EF+ G+
Sbjct: 98 SGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 157
Query: 574 LDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAK 633
L + ++ E + L + L+ LH Q +IH DIK +++LL + K
Sbjct: 158 LTDIVTHTR----MNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 210
Query: 634 VSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKN 693
+SDFG +++E L GT ++APE I+ + D++S G++++E++ G
Sbjct: 211 LSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
Query: 694 FDPNETSDKAHFPSYAFKMMEEG---KLRNI 721
+ NE P A KM+ + +L+N+
Sbjct: 270 YF-NEP------PLKAMKMIRDNLPPRLKNL 293
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 123
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S L GT YL
Sbjct: 124 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDDLCGTLDYLP 177
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 21/213 (9%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+LG GGFG V + + D G ++A+K + E + ++ + E+ I+ ++H ++V R
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 556 CAEGTHRL-------LAYEFMANGSLDKWIFK-KNQEFLLDWETRFNIALGTAKGLAYLH 607
+G +L LA E+ G L K++ + +N L + R ++ + L YLH
Sbjct: 82 -PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLH 139
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ RIIH D+KPEN++L K+ D G AK + +Q + T GT YLAPE
Sbjct: 140 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPE 194
Query: 665 WITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
+ + D +S+G + E I G + F PN
Sbjct: 195 LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 16/215 (7%)
Query: 490 QTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK-----EFRAEVSIIG 542
Q A +F + LG+G FG+VY + K+ Q +K + R EV I
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ H ++++L G+ + T L E+ G++ + + K ++ D + A
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANA 123
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L+Y H +R+IH DIKPEN+LL K++DFG + S L GT YL
Sbjct: 124 LSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRXXLCGTLDYLP 177
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
PE I EK D++S G++ E + G+ F+ N
Sbjct: 178 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ YL
Sbjct: 91 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYL 147
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ + G + ++A
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 204
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 30/270 (11%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEG 559
+G+G FG V G G ++AVK ++ + F AE S++ + H +LV+L G E
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 560 THRL-LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
L + E+MA GSL ++ + + +L + +L + + YL + +H D
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 127
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
+ NVL+ ++ AKVSDFGL T+E S T + + APE + S KSDV+
Sbjct: 128 LAARNVLVSEDNVAKVSDFGL----TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 183
Query: 679 SYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDRVFT 737
S+G++L EI GR + D +KM + D
Sbjct: 184 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-----------------DAPDGCPP 226
Query: 738 AV-KVALWCVQEDMSLRPSMTKVVQMLEGI 766
AV +V C D ++RPS ++ + LE I
Sbjct: 227 AVYEVMKNCWHLDAAMRPSFLQLREQLEHI 256
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 106/214 (49%), Gaps = 15/214 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIG---QGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G G FG+VY+G +AVK L Q + F+ EV ++ H++++ G+
Sbjct: 43 RIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ + ++ SL + +F + +IA TA+G+ YLH + II
Sbjct: 101 STK-PQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHA---KSII 154
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR-EQSHVFTTLRGTRGYLAPEWIT---NYAI 671
H D+K N+ L ++ K+ DFGLA +R SH F L G+ ++APE I
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
S +SDVY++G+VL E++ G+ + D+ F
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF 248
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 89
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ YL
Sbjct: 90 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYL 146
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ + G + ++A
Sbjct: 147 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 203
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELM 228
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 30/270 (11%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEG 559
+G+G FG V G G ++AVK ++ + F AE S++ + H +LV+L G E
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 560 THRL-LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
L + E+MA GSL ++ + + +L + +L + + YL + +H D
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 142
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
+ NVL+ ++ AKVSDFGL T+E S T + + APE + S KSDV+
Sbjct: 143 LAARNVLVSEDNVAKVSDFGL----TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 198
Query: 679 SYGMVLLEIIG-GRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDRVFT 737
S+G++L EI GR + D +KM + D
Sbjct: 199 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM-----------------DAPDGCPP 241
Query: 738 AV-KVALWCVQEDMSLRPSMTKVVQMLEGI 766
AV +V C D ++RPS ++ + LE I
Sbjct: 242 AVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 21/213 (9%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+LG GGFG V + + D G ++A+K + E + ++ + E+ I+ ++H ++V R
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 556 CAEGTHRL-------LAYEFMANGSLDKWIFK-KNQEFLLDWETRFNIALGTAKGLAYLH 607
+G +L LA E+ G L K++ + +N L + R ++ + L YLH
Sbjct: 81 -PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS-DISSALRYLH 138
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ RIIH D+KPEN++L K+ D G AK + +Q + T GT YLAPE
Sbjct: 139 EN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPE 193
Query: 665 WITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
+ + D +S+G + E I G + F PN
Sbjct: 194 LLEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ YL
Sbjct: 92 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ + G + ++A
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 205
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 87
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ YL
Sbjct: 88 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYL 144
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ + G + ++A
Sbjct: 145 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 201
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELM 226
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ YL
Sbjct: 93 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYL 149
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ + G + ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMAL 206
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 40/220 (18%)
Query: 496 FSVKLGQGGFGSVYQG-VLPDGTRL--AVKKLEGIG--QGKKEFRAEVSIIGSI-HHLHL 549
F +G+G FG V + + DG R+ A+K+++ ++F E+ ++ + HH ++
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA--------- 600
+ L G C + LA E+ +G+L ++ K +L+ + F IA TA
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSR---VLETDPAFAIANSTASTLSSQQLL 135
Query: 601 -------KGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT 653
+G+ YL + ++ IH D+ N+L+ +NY AK++DFGL +R Q
Sbjct: 136 HFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL----SRGQE---VY 185
Query: 654 LRGTRGYLAPEWIT----NYAI-SEKSDVYSYGMVLLEII 688
++ T G L W+ NY++ + SDV+SYG++L EI+
Sbjct: 186 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 225
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 29/214 (13%)
Query: 495 NFSVKLGQGGFGSVYQGVL-------PDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIH 545
S +LGQG FG VY+GV P+ TR+A+K + ++ EF E S++ +
Sbjct: 15 TMSRELGQGSFGMVYEGVAKGVVKDEPE-TRVAIKTVNEAASMRERIEFLNEASVMKEFN 73
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALG 598
H+V+L G ++G L+ E M G L ++ E + +A
Sbjct: 74 CHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR 658
A G+AYL+ + + +H D+ N + +++ K+ DFG MTR+ +G +
Sbjct: 134 IADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFG----MTRDIYETDYYRKGGK 186
Query: 659 G-----YLAPEWITNYAISEKSDVYSYGMVLLEI 687
G +++PE + + + SDV+S+G+VL EI
Sbjct: 187 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 98/189 (51%), Gaps = 11/189 (5%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEG 559
+G+G FG V G G ++AVK ++ + F AE S++ + H +LV+L G E
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA-FLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 560 THRL-LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
L + E+MA GSL ++ + + +L + +L + + YL + +H D
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRD 314
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVY 678
+ NVL+ ++ AKVSDFGL T+E S T + + APE + S KSDV+
Sbjct: 315 LAARNVLVSEDNVAKVSDFGL----TKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVW 370
Query: 679 SYGMVLLEI 687
S+G++L EI
Sbjct: 371 SFGILLWEI 379
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 91
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ YL
Sbjct: 92 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKYL 148
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQS---HVFTTLRGTRGYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ H T + ++A
Sbjct: 149 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMAL 205
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELM 230
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 500 LGQGGFGSVY-----QGVLPDGTRLAVK-KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG+G FG+VY Q ++ K +LE G + + R EV I + H ++++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGV-EHQLRREVEIQSHLRHPNILRLY 78
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G+ + T L E+ G++ + + K ++ D + A L+Y H +R
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKLSR---FDEQRTATYITELANALSYCH---SKR 132
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISE 673
+IH DIKPEN+LL N K++DFG + S TL GT YL PE I E
Sbjct: 133 VIHRDIKPENLLLGSNGELKIADFGWS---VHAPSSRRDTLCGTLDYLPPEMIEGRMHDE 189
Query: 674 KSDVYSYGMVLLEIIGGRKNFDPN 697
K D++S G++ E + G F+ +
Sbjct: 190 KVDLWSLGVLCYEFLVGMPPFEAH 213
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 112/220 (50%), Gaps = 40/220 (18%)
Query: 496 FSVKLGQGGFGSVYQG-VLPDGTRL--AVKKLEGIG--QGKKEFRAEVSIIGSI-HHLHL 549
F +G+G FG V + + DG R+ A+K+++ ++F E+ ++ + HH ++
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA--------- 600
+ L G C + LA E+ +G+L ++ K +L+ + F IA TA
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSR---VLETDPAFAIANSTASTLSSQQLL 145
Query: 601 -------KGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT 653
+G+ YL + ++ IH D+ N+L+ +NY AK++DFGL +R Q
Sbjct: 146 HFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL----SRGQE---VY 195
Query: 654 LRGTRGYLAPEWIT----NYAI-SEKSDVYSYGMVLLEII 688
++ T G L W+ NY++ + SDV+SYG++L EI+
Sbjct: 196 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 235
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 99/206 (48%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 149
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E + GT Y++PE +T
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 208
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ S+ SD+++ G ++ +++ G F
Sbjct: 209 KSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 500 LGQGGFGSVYQG-VLPDGTRLAVKKLEGIGQGK----KEFRAEVSIIGSIHHLHLVKLRG 554
LG+G F VY+ + G +A+K ++ K + + EV I + H +++L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYN 78
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+ + + L E NG +++++ + + F + F + T G+ YLH I
Sbjct: 79 YFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIIT--GMLYLH---SHGI 133
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLA-KLMTREQSHVFTTLRGTRGYLAPEWITNYAISE 673
+H D+ N+LL N + K++DFGLA +L + H TL GT Y++PE T A
Sbjct: 134 LHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHY--TLCGTPNYISPEIATRSAHGL 191
Query: 674 KSDVYSYGMVLLEIIGGRKNFDPNETSD 701
+SDV+S G + ++ GR FD + +
Sbjct: 192 ESDVWSLGCMFYTLLIGRPPFDTDTVKN 219
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 27/209 (12%)
Query: 499 KLGQGGFGSVYQGVLPD------GTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHHLHLV 550
+LGQG FG VY+G D TR+AVK + ++ EF E S++ H+V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGTAKGL 603
+L G ++G L+ E MA+G L ++ E + + +A A G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG---- 659
AYL+ ++ +H ++ N ++ ++ K+ DFG MTR+ +G +G
Sbjct: 144 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 196
Query: 660 -YLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE + + + SD++S+G+VL EI
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 23/221 (10%)
Query: 479 GMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLP---DGT--RLAVKKLEGIG--QGK 531
G P F R L+ + LG+G FG V DGT +AVK L+ Q +
Sbjct: 23 GDPTVFHKRYLKKIRD-----LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHR 77
Query: 532 KEFRAEVSIIGSIHHLHLVKLRGFCAE-GTHRL-LAYEFMANGSLDKWIFKKNQEFLLDW 589
++ E+ I+ +++H H++K +G C + G L L E++ GSL ++ + + +
Sbjct: 78 SGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IGL 133
Query: 590 ETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT--REQ 647
A +G+AYLH Q IH D+ NVLLD++ K+ DFGLAK + E
Sbjct: 134 AQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEX 190
Query: 648 SHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEII 688
V + APE + Y SDV+S+G+ L E++
Sbjct: 191 YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 27/209 (12%)
Query: 499 KLGQGGFGSVYQGVLPD------GTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHHLHLV 550
+LGQG FG VY+G D TR+AVK + ++ EF E S++ H+V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD-------WETRFNIALGTAKGL 603
+L G ++G L+ E MA+G L ++ E + + +A A G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG---- 659
AYL+ ++ +H ++ N ++ ++ K+ DFG MTR+ +G +G
Sbjct: 145 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFG----MTRDIYETDYYRKGGKGLLPV 197
Query: 660 -YLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE + + + SD++S+G+VL EI
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F +LG G FG V G +A+K ++ + EF E ++ ++ H LV+L G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C + + E+MANG L ++ + F + + + + YL ++
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQF 126
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D+ N L++D KVSDFGL++ + ++ +T+ RG++ + PE +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSRGSKFPVRWSPPEVLMYSKF 183
Query: 672 SEKSDVYSYGMVLLEI 687
S KSD++++G+++ EI
Sbjct: 184 SSKSDIWAFGVLMWEI 199
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 22/201 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVK---KLEGIGQGKKEFRA---EVSIIGSIHHLHLVKL 552
LG G FG+V++GV +P+G + + K+ G++ F+A + IGS+ H H+V+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKN----QEFLLDWETRFNIALGTAKGLAYLHE 608
G C G+ L +++ GSL + + + LL+W + AKG+ YL E
Sbjct: 99 LGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLEE 151
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTRGYLAPEWIT 667
++H ++ NVLL +V+DFG+A L+ + +++ + ++A E I
Sbjct: 152 ---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 668 NYAISEKSDVYSYGMVLLEII 688
+ +SDV+SYG+ + E++
Sbjct: 209 FGKYTHQSDVWSYGVTVWELM 229
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 102/202 (50%), Gaps = 11/202 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFR-AEVSIIGSIHHLHLVKL 552
NF +K+G+G G V G ++AVKK++ Q ++E EV I+ HH ++V +
Sbjct: 49 NF-IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDM 107
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G + EF+ G+L + ++ E + L + L+YLH +Q
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRALSYLH---NQ 160
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAIS 672
+IH DIK +++LL + K+SDFG +++E L GT ++APE I+
Sbjct: 161 GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-RKXLVGTPYWMAPEVISRLPYG 219
Query: 673 EKSDVYSYGMVLLEIIGGRKNF 694
+ D++S G++++E+I G +
Sbjct: 220 TEVDIWSLGIMVIEMIDGEPPY 241
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 28/216 (12%)
Query: 495 NFSVKLGQGGFGSVYQGVL-----PDGT-RLAVKKLEGIGQG--KKEFRAEVSIIGSI-H 545
F LG G FG V + D ++AVK L+ K+ +E+ I+ +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA----- 600
H ++V L G C G L+ E+ G L ++ +K++ +L+ + F IA TA
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR--VLETDPAFAIANSTASTRDL 166
Query: 601 --------KGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
+G+A+L + IH D+ NVLL + + AK+ DFGLA+ + + +++
Sbjct: 167 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 653 -TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
R ++APE I + + +SDV+SYG++L EI
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 106/214 (49%), Gaps = 25/214 (11%)
Query: 495 NFSVKLGQGGFGSVYQ----GVLPDGTR--LAVKKLEGIGQGKKEFRA---EVSIIGSI- 544
N LG+G FG V + G+ T +AVK L+ G E RA E+ I+ I
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE-GATHSEHRALMSELKILIHIG 88
Query: 545 HHLHLVKLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL---------LDWETRFN 594
HHL++V L G C + G ++ EF G+L ++ K EF+ L E
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 595 IALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-T 653
+ AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ +V
Sbjct: 149 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 654 LRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
R ++APE I + + +SDV+S+G++L EI
Sbjct: 206 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 130/291 (44%), Gaps = 32/291 (10%)
Query: 500 LGQGGFGSVYQGVLPD-----GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+GGF ++ D ++ K L +++ E+SI S+ H H+V G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
F + + E SL + K ++ L + E R+ + G YLH + R+
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 142
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH D+K N+ L+++ K+ DFGLA + + TL GT Y+APE ++ S +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KTLCGTPNYIAPEVLSKKGHSFE 201
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDR 734
DV+S G ++ ++ G+ F ETS ++E LR I + +I + +
Sbjct: 202 VDVWSIGCIMYTLLVGKPPF---ETS-----------CLKETYLR-IKKNEYSIPKHINP 246
Query: 735 VFTAVKVALWCVQEDMSLRPSMTKVVQ---MLEGICPVPQPPTCSPLGARL 782
V A + +Q D + RP++ +++ G P P TC + R
Sbjct: 247 V--AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRF 295
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRA-EVSIIGSIHHLHLVKLRGFC 556
K+GQG G+VY + + G +A++++ Q KKE E+ ++ + ++V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
G + E++A GSL + E +D + + L +LH + ++IH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
DIK +N+LL + K++DFG +T EQS + + GT ++APE +T A K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 677 VYSYGMVLLEIIGGRKNF 694
++S G++ +E+I G +
Sbjct: 199 IWSLGIMAIEMIEGEPPY 216
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 151
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ +L
Sbjct: 152 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFL 208
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQ---SHVFTTLRGTRGYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ H T + ++A
Sbjct: 209 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 265
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELM 290
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRA-EVSIIGSIHHLHLVKLRGFC 556
K+GQG G+VY + + G +A++++ Q KKE E+ ++ + ++V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
G + E++A GSL + E +D + + L +LH + ++IH
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIH 139
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
DIK +N+LL + K++DFG +T EQS + + GT ++APE +T A K D
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVVTRKAYGPKVD 198
Query: 677 VYSYGMVLLEIIGGRKNF 694
++S G++ +E+I G +
Sbjct: 199 IWSLGIMAIEMIEGEPPY 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 10/198 (5%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRA-EVSIIGSIHHLHLVKLRGFC 556
K+GQG G+VY + + G +A++++ Q KKE E+ ++ + ++V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
G + E++A GSL + E +D + + L +LH + ++IH
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
+IK +N+LL + K++DFG +T EQS +T+ GT ++APE +T A K D
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSTMVGTPYWMAPEVVTRKAYGPKVD 199
Query: 677 VYSYGMVLLEIIGGRKNF 694
++S G++ +E+I G +
Sbjct: 200 IWSLGIMAIEMIEGEPPY 217
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 28/205 (13%)
Query: 500 LGQGGFGSVYQGVLP---DGT--RLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVKL 552
LG+G FG V DGT +AVK L+ Q + ++ E+ I+ +++H H++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 553 RGFCA-EGTHRL-LAYEFMANGSLDKWIFKKN---QEFLLDWETRFNIALGTAKGLAYLH 607
+G C +G L L E++ GSL ++ + + + LL A +G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-------FAQQICEGMAYLH 134
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG----YLAP 663
Q IH ++ NVLLD++ K+ DFGLAK + + H + +R + AP
Sbjct: 135 ---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAP 189
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + Y SDV+S+G+ L E++
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 28/216 (12%)
Query: 495 NFSVKLGQGGFGSVYQGVL-----PDGT-RLAVKKLEGIGQG--KKEFRAEVSIIGSI-H 545
F LG G FG V + D ++AVK L+ K+ +E+ I+ +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT------ 599
H ++V L G C G L+ E+ G L ++ +K++ +L+ + F IA T
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSR--VLETDPAFAIANSTLSTRDL 166
Query: 600 -------AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
A+G+A+L + IH D+ NVLL + + AK+ DFGLA+ + + +++
Sbjct: 167 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 653 -TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
R ++APE I + + +SDV+SYG++L EI
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 100/198 (50%), Gaps = 10/198 (5%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRA-EVSIIGSIHHLHLVKLRGFC 556
K+GQG G+VY + + G +A++++ Q KKE E+ ++ + ++V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
G + E++A GSL + E +D + + L +LH + ++IH
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVV----TETCMDEGQIAAVCRECLQALEFLHSN---QVIH 140
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSD 676
DIK +N+LL + K++DFG +T EQS + + GT ++APE +T A K D
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVVTRKAYGPKVD 199
Query: 677 VYSYGMVLLEIIGGRKNF 694
++S G++ +E+I G +
Sbjct: 200 IWSLGIMAIEMIEGEPPY 217
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 130/291 (44%), Gaps = 32/291 (10%)
Query: 500 LGQGGFGSVYQGVLPD-----GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+GGF ++ D ++ K L +++ E+SI S+ H H+V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
F + + E SL + K ++ L + E R+ + G YLH + R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 138
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH D+K N+ L+++ K+ DFGLA + + TL GT Y+APE ++ S +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KTLCGTPNYIAPEVLSKKGHSFE 197
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDR 734
DV+S G ++ ++ G+ F ETS ++E LR I + +I + +
Sbjct: 198 VDVWSIGCIMYTLLVGKPPF---ETS-----------CLKETYLR-IKKNEYSIPKHINP 242
Query: 735 VFTAVKVALWCVQEDMSLRPSMTKVVQ---MLEGICPVPQPPTCSPLGARL 782
V A + +Q D + RP++ +++ G P P TC + R
Sbjct: 243 V--AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRF 291
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 104/205 (50%), Gaps = 28/205 (13%)
Query: 500 LGQGGFGSVYQGVLP---DGT--RLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVKL 552
LG+G FG V DGT +AVK L+ Q + ++ E+ I+ +++H H++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 553 RGFCA-EGTHRL-LAYEFMANGSLDKWIFKKN---QEFLLDWETRFNIALGTAKGLAYLH 607
+G C +G L L E++ GSL ++ + + + LL A +G+AYLH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLL-------FAQQICEGMAYLH 134
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG----YLAP 663
Q IH ++ NVLLD++ K+ DFGLAK + + H + +R + AP
Sbjct: 135 A---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAP 189
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + Y SDV+S+G+ L E++
Sbjct: 190 ECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 22/201 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVK---KLEGIGQGKKEFRA---EVSIIGSIHHLHLVKL 552
LG G FG+V++GV +P+G + + K+ G++ F+A + IGS+ H H+V+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKN----QEFLLDWETRFNIALGTAKGLAYLHE 608
G C G+ L +++ GSL + + + LL+W + AKG+ YL E
Sbjct: 81 LGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYLEE 133
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTRGYLAPEWIT 667
++H ++ NVLL +V+DFG+A L+ + +++ + ++A E I
Sbjct: 134 ---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 668 NYAISEKSDVYSYGMVLLEII 688
+ +SDV+SYG+ + E++
Sbjct: 191 FGKYTHQSDVWSYGVTVWELM 211
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 112/220 (50%), Gaps = 40/220 (18%)
Query: 496 FSVKLGQGGFGSVYQG-VLPDGTRL--AVKKLEGIG--QGKKEFRAEVSIIGSI-HHLHL 549
F +G+G FG V + + DG R+ A+K+++ ++F E+ ++ + HH ++
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA--------- 600
+ L G C + LA E+ +G+L ++ K +L+ + F IA TA
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSR---VLETDPAFAIANSTASTLSSQQLL 142
Query: 601 -------KGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT 653
+G+ YL + ++ IH ++ N+L+ +NY AK++DFGL +R Q
Sbjct: 143 HFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGL----SRGQE---VY 192
Query: 654 LRGTRGYLAPEWIT----NYAI-SEKSDVYSYGMVLLEII 688
++ T G L W+ NY++ + SDV+SYG++L EI+
Sbjct: 193 VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 232
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ +L
Sbjct: 94 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQ---SHVFTTLRGTRGYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ H T + ++A
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMAL 207
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 150
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E + GT Y++PE +T
Sbjct: 151 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 209
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 495 NFSVKLGQGGFGSVYQGVL-----PDGT-RLAVKKLEGIGQG--KKEFRAEVSIIGSI-H 545
F LG G FG V + D ++AVK L+ K+ +E+ I+ +
Sbjct: 41 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 100
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL-------LDWETRFNIALG 598
H ++V L G C G L+ E+ G L ++ +K + L L+ + +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGT 657
A+G+A+L + IH D+ NVLL + + AK+ DFGLA+ + + +++ R
Sbjct: 161 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 217
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+SYG++L EI
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 90
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ +L
Sbjct: 91 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFL 147
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQ---SHVFTTLRGTRGYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ H T + ++A
Sbjct: 148 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 204
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELM 229
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ +L
Sbjct: 93 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQ---SHVFTTLRGTRGYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ H T + ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 97
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ +L
Sbjct: 98 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFL 154
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQ---SHVFTTLRGTRGYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ H T + ++A
Sbjct: 155 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 211
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELM 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 93
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ +L
Sbjct: 94 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFL 150
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQ---SHVFTTLRGTRGYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ H T + ++A
Sbjct: 151 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 207
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELM 232
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 106/208 (50%), Gaps = 23/208 (11%)
Query: 499 KLGQGGFG-SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
K+G+G FG ++ DG + +K++ + ++E R EV+++ ++ H ++V+ R
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 555 FCAEGTHRLLAYEFMANGSLDKWI-------FKKNQEFLLDWETRFNIALGTAKGLAYLH 607
E + ++ G L K I F+++Q +LDW + +AL ++H
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQ--ILDWFVQICLAL------KHVH 142
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
D++I+H DIK +N+ L + ++ DFG+A+++ + GT YL+PE
Sbjct: 143 ---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI-GTPYYLSPEICE 198
Query: 668 NYAISEKSDVYSYGMVLLEIIGGRKNFD 695
N + KSD+++ G VL E+ + F+
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 103/213 (48%), Gaps = 23/213 (10%)
Query: 495 NFSVKLGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-H 545
N LG+G FG V + G+ T R K+ G E RA E+ I+ I H
Sbjct: 30 NLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGH 89
Query: 546 HLHLVKLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL---------LDWETRFNI 595
HL++V L G C + G ++ EF G+L ++ K EF+ L E
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TL 654
+ AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ +V
Sbjct: 150 SFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 206
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
R ++APE I + + +SDV+S+G++L EI
Sbjct: 207 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 17/205 (8%)
Query: 495 NFSVKLGQGGFGSVYQGVL--PDGTRL--AVKKLEGIGQGKK--EFRAEVSIIGSIHHLH 548
+F+ +G+G FG VY G L DG ++ AVK L I + +F E I+ H +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPN 92
Query: 549 LVKLRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++ L G C +EG+ L+ +M +G L +I +N+ + L AKG+ +L
Sbjct: 93 VLSLLGICLRSEGS-PLVVLPYMKHGDLRNFI--RNETHNPTVKDLIGFGLQVAKGMKFL 149
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQ---SHVFTTLRGTRGYLAP 663
++ +H D+ N +LD+ + KV+DFGLA+ M ++ H T + ++A
Sbjct: 150 ---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMAL 206
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + + KSDV+S+G++L E++
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELM 231
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 112/244 (45%), Gaps = 37/244 (15%)
Query: 500 LGQGGFGSVYQGVLP-DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+G GGFG V++ DG +K+ + ++ EV + + H+++V G C +
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKR---VKYNNEKAEREVKALAKLDHVNIVHYNG-CWD 74
Query: 559 G-----------THR------LLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK 601
G + R + EF G+L++WI K+ E LD + K
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLDKVLALELFEQITK 133
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYL 661
G+ Y+H +++I+ D+KP N+ L D K+ DFGL + + + +GT Y+
Sbjct: 134 GVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS--KGTLRYM 188
Query: 662 APEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNI 721
+PE I++ ++ D+Y+ G++L E++ D A S F + +G + +I
Sbjct: 189 SPEQISSQDYGKEVDLYALGLILAELL---------HVCDTAFETSKFFTDLRDGIISDI 239
Query: 722 LDSR 725
D +
Sbjct: 240 FDKK 243
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 21/239 (8%)
Query: 488 DLQTATNNFSVKLGQGGFGSV-YQGVLPDGTRLAVKKLEGIGQGKKEFR-AEVSIIGSIH 545
D ++ +NF +K+G+G G V V G +AVKK++ Q ++E EV I+
Sbjct: 26 DPRSYLDNF-IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 84
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
H ++V++ G + EF+ G+L + ++ E + L + L+
Sbjct: 85 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSV 140
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEW 665
LH Q +IH DIK +++LL + K+SDFG +++E L GT ++APE
Sbjct: 141 LHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPEL 196
Query: 666 ITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEG---KLRNI 721
I+ + D++S G++++E++ G + NE P A KM+ + +L+N+
Sbjct: 197 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-NEP------PLKAMKMIRDNLPPRLKNL 248
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%), Gaps = 14/209 (6%)
Query: 495 NFSV--KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRA----EVSIIGSIHHL 547
NF + K+G+G F VY+ L DG +A+KK++ + RA E+ ++ ++H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 548 HLVKLRGFCAEGTHRLLAYEFMANGSLDKWI--FKKNQEFLLDWETRFNIALGTAKGLAY 605
+++K E + E G L + I FKK Q+ L+ T + + L +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEH 151
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEW 665
+H +R++H DIKP NV + K+ D GL + + + + +L GT Y++PE
Sbjct: 152 MHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH-SLVGTPYYMSPER 207
Query: 666 ITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
I + KSD++S G +L E+ + F
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 13 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 72
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 73 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 127
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 128 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 186
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 187 KSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 21/239 (8%)
Query: 488 DLQTATNNFSVKLGQGGFGSV-YQGVLPDGTRLAVKKLEGIGQGKKEFR-AEVSIIGSIH 545
D ++ +NF +K+G+G G V V G +AVKK++ Q ++E EV I+
Sbjct: 28 DPRSYLDNF-IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 86
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
H ++V++ G + EF+ G+L + ++ E + L + L+
Sbjct: 87 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSV 142
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEW 665
LH Q +IH DIK +++LL + K+SDFG +++E L GT ++APE
Sbjct: 143 LHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPEL 198
Query: 666 ITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEG---KLRNI 721
I+ + D++S G++++E++ G + NE P A KM+ + +L+N+
Sbjct: 199 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-NEP------PLKAMKMIRDNLPPRLKNL 250
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 102/210 (48%), Gaps = 20/210 (9%)
Query: 495 NFSVKLGQGGFGSVYQ------GVLPDGTRLAVKKLEGIGQG--KKEFRAEVSIIGSI-H 545
F LG G FG V + G ++AVK L+ K+ +E+ I+ +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL-------LDWETRFNIALG 598
H ++V L G C G L+ E+ G L ++ +K + L L+ + +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGT 657
A+G+A+L + IH D+ NVLL + + AK+ DFGLA+ + + +++ R
Sbjct: 169 VAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 225
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+SYG++L EI
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 32/284 (11%)
Query: 500 LGQGGFGSVYQGVLPD-----GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+GGF ++ D ++ K L +++ E+SI S+ H H+V G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
F + + E SL + K ++ L + E R+ + G YLH + R+
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 138
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH D+K N+ L+++ K+ DFGLA + + TL GT Y+APE ++ S +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KTLCGTPNYIAPEVLSKKGHSFE 197
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDR 734
DV+S G ++ ++ G+ F ETS ++E LR I + +I + +
Sbjct: 198 VDVWSIGCIMYTLLVGKPPF---ETS-----------CLKETYLR-IKKNEYSIPKHINP 242
Query: 735 VFTAVKVALWCVQEDMSLRPSMTKVVQ---MLEGICPVPQPPTC 775
V A + +Q D + RP++ +++ G P P TC
Sbjct: 243 V--AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITC 284
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 21/239 (8%)
Query: 488 DLQTATNNFSVKLGQGGFGSV-YQGVLPDGTRLAVKKLEGIGQGKKEFR-AEVSIIGSIH 545
D ++ +NF +K+G+G G V V G +AVKK++ Q ++E EV I+
Sbjct: 17 DPRSYLDNF-IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 75
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
H ++V++ G + EF+ G+L + ++ E + L + L+
Sbjct: 76 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSV 131
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEW 665
LH Q +IH DIK +++LL + K+SDFG +++E L GT ++APE
Sbjct: 132 LHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPEL 187
Query: 666 ITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEG---KLRNI 721
I+ + D++S G++++E++ G + NE P A KM+ + +L+N+
Sbjct: 188 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-NEP------PLKAMKMIRDNLPPRLKNL 239
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 38 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 97
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 98 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 152
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 153 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 211
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 212 KSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 147
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE 206
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 12 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 71
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 72 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 126
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 127 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 185
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 186 KSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 10 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 69
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 70 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 124
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 125 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 183
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 184 KSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 36 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 95
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 96 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 150
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 151 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 209
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 210 KSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 149
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 147
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 33 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 147
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 149
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 21/239 (8%)
Query: 488 DLQTATNNFSVKLGQGGFGSV-YQGVLPDGTRLAVKKLEGIGQGKKEFR-AEVSIIGSIH 545
D ++ +NF +K+G+G G V V G +AVKK++ Q ++E EV I+
Sbjct: 21 DPRSYLDNF-IKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ 79
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
H ++V++ G + EF+ G+L + ++ E + L + L+
Sbjct: 80 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSV 135
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEW 665
LH Q +IH DIK +++LL + K+SDFG +++E L GT ++APE
Sbjct: 136 LHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPEL 191
Query: 666 ITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEG---KLRNI 721
I+ + D++S G++++E++ G + NE P A KM+ + +L+N+
Sbjct: 192 ISRLPYGPEVDIWSLGIMVIEMVDGEPPYF-NEP------PLKAMKMIRDNLPPRLKNL 243
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 146
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E + GT Y++PE +T
Sbjct: 147 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE 205
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 11 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 70
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 71 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 125
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 126 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 184
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 185 KSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 149
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 131/295 (44%), Gaps = 42/295 (14%)
Query: 495 NFSVKLGQGGFGSVYQ----GVLPD--GTRLAVKKLEGIGQ--GKKEFRAEVSIIGSI-H 545
+F LG G FG V + G++ +AVK L+ ++ +E+ ++ + +
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 85
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-------------- 591
H+++V L G C G L+ E+ G L ++ +K F+ +
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 145
Query: 592 -RFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ + AKG+A+L + IH D+ N+LL K+ DFGLA+ + + ++V
Sbjct: 146 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 202
Query: 651 FT-TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYA 709
R ++APE I N + +SDV+SYG+ L E+ + P D S
Sbjct: 203 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-----SKF 257
Query: 710 FKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLE 764
+KM++EG L+ + ++ +K C D RP+ ++VQ++E
Sbjct: 258 YKMIKEGF------RMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 303
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 149
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 209 KSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 35 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 94
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 95 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 149
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 208
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 209 KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 131/295 (44%), Gaps = 42/295 (14%)
Query: 495 NFSVKLGQGGFGSVYQ----GVLPD--GTRLAVKKLEGIGQ--GKKEFRAEVSIIGSI-H 545
+F LG G FG V + G++ +AVK L+ ++ +E+ ++ + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-------------- 591
H+++V L G C G L+ E+ G L ++ +K F+ +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 592 -RFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ + AKG+A+L + IH D+ N+LL K+ DFGLA+ + + ++V
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYV 225
Query: 651 FT-TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYA 709
R ++APE I N + +SDV+SYG+ L E+ + P D S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-----SKF 280
Query: 710 FKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLE 764
+KM++EG L+ + ++ +K C D RP+ ++VQ++E
Sbjct: 281 YKMIKEG------FRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGS-VYQGVLPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F + V L A+K LE I + K + E ++ + H
Sbjct: 33 KFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 92
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 93 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 147
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 206
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 207 KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 32/291 (10%)
Query: 500 LGQGGFGSVYQGVLPD-----GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+GGF Y+ D ++ K + K++ E++I S+ + H+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
F + + E SL + K ++ + + E R+ + T +G+ YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMR-QTIQGVQYLH---NNRV 163
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH D+K N+ L+D+ K+ DFGLA + + TL GT Y+APE + S +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KTLCGTPNYIAPEVLCKKGHSFE 222
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDR 734
D++S G +L ++ G+ F ETS ++E +R I + ++ +
Sbjct: 223 VDIWSLGCILYTLLVGKPPF---ETS-----------CLKETYIR-IKKNEYSVPRHINP 267
Query: 735 VFTAVKVALWCVQEDMSLRPSMTKVVQ---MLEGICPVPQPPTCSPLGARL 782
V +A+ + + D +LRPS+ +++ G P+ P +C + R
Sbjct: 268 VASALIRRM--LHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPPRF 316
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 17 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 76
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 77 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 131
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 132 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 190
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 191 KSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
K+G+G +G VY+ G +A+K++ E G R E+S++ +HH ++V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLID 86
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
L +EFM K + +N+ L D + + + +G+A+ H+ RI
Sbjct: 87 VIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYL-YQLLRGVAHCHQ---HRI 140
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWIT-NYA 670
+H D+KP+N+L++ + K++DFGLA+ + R +H TL Y AP+ + +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL----WYRAPDVLMGSKK 196
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNETSD 701
S D++S G + E+I G+ F P T D
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLF-PGVTDD 226
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 20/211 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
K+G+G +G VY+ G +A+K++ E G R E+S++ +HH ++V L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR-EISLLKELHHPNIVSLID 86
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
L +EFM K + +N+ L D + + + +G+A+ H+ RI
Sbjct: 87 VIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYL-YQLLRGVAHCHQ---HRI 140
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWIT-NYA 670
+H D+KP+N+L++ + K++DFGLA+ + R +H TL Y AP+ + +
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTL----WYRAPDVLMGSKK 196
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNETSD 701
S D++S G + E+I G+ F P T D
Sbjct: 197 YSTSVDIWSIGCIFAEMITGKPLF-PGVTDD 226
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 112/257 (43%), Gaps = 50/257 (19%)
Query: 500 LGQGGFGSVYQGVLP-DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+G GGFG V++ DG +++ + ++ EV + + H+++V G C +
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRR---VKYNNEKAEREVKALAKLDHVNIVHYNG-CWD 75
Query: 559 G------------------------THR------LLAYEFMANGSLDKWIFKKNQEFLLD 588
G + R + EF G+L++WI K+ E LD
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE-KLD 134
Query: 589 WETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQS 648
+ KG+ Y+H +++IH D+KP N+ L D K+ DFGL + +
Sbjct: 135 KVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK 191
Query: 649 HVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSY 708
T +GT Y++PE I++ ++ D+Y+ G++L E++ D A S
Sbjct: 192 R--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL---------HVCDTAFETSK 240
Query: 709 AFKMMEEGKLRNILDSR 725
F + +G + +I D +
Sbjct: 241 FFTDLRDGIISDIFDKK 257
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 131/295 (44%), Gaps = 42/295 (14%)
Query: 495 NFSVKLGQGGFGSVYQ----GVLPD--GTRLAVKKLEGIGQ--GKKEFRAEVSIIGSI-H 545
+F LG G FG V + G++ +AVK L+ ++ +E+ ++ + +
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 101
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-------------- 591
H+++V L G C G L+ E+ G L ++ +K F+ +
Sbjct: 102 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 161
Query: 592 -RFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ + AKG+A+L + IH D+ N+LL K+ DFGLA+ + + ++V
Sbjct: 162 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 218
Query: 651 FT-TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYA 709
R ++APE I N + +SDV+SYG+ L E+ + P D S
Sbjct: 219 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-----SKF 273
Query: 710 FKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLE 764
+KM++EG L+ + ++ +K C D RP+ ++VQ++E
Sbjct: 274 YKMIKEG------FRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 319
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 12/206 (5%)
Query: 495 NFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG---IGQGKKEF-RAEVSIIGSIHHLHL 549
F LG+G F +V L A+K LE I + K + E ++ + H
Sbjct: 32 KFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFF 91
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
VKL + + NG L K+I K + TRF A L YLH
Sbjct: 92 VKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTA-EIVSALEYLH-- 146
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGTRGYLAPEWITN 668
+ IIH D+KPEN+LL+++ H +++DFG AK+++ E GT Y++PE +T
Sbjct: 147 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 205
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + SD+++ G ++ +++ G F
Sbjct: 206 KSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 495 NFSVKLGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-H 545
N LG+G FG V + G+ T R K+ G E RA E+ I+ I H
Sbjct: 31 NLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH 90
Query: 546 HLHLVKLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL------------LDWETR 592
HL++V L G C + G ++ EF G+L ++ K EF+ L E
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
+ AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ V
Sbjct: 151 ICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK 207
Query: 653 -TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
R ++APE I + + +SDV+S+G++L EI
Sbjct: 208 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F +LG G FG V G +A+K ++ + EF E ++ ++ H LV+L G
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C + + E+MANG L ++ + F + + + + YL ++
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQF 141
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D+ N L++D KVSDFGL++ + ++ +T+ G++ + PE +
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 672 SEKSDVYSYGMVLLEI 687
S KSD++++G+++ EI
Sbjct: 199 SSKSDIWAFGVLMWEI 214
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 131/295 (44%), Gaps = 42/295 (14%)
Query: 495 NFSVKLGQGGFGSVYQ----GVLPD--GTRLAVKKLEGIGQ--GKKEFRAEVSIIGSI-H 545
+F LG G FG V + G++ +AVK L+ ++ +E+ ++ + +
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 108
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-------------- 591
H+++V L G C G L+ E+ G L ++ +K F+ +
Sbjct: 109 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 168
Query: 592 -RFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ + AKG+A+L + IH D+ N+LL K+ DFGLA+ + + ++V
Sbjct: 169 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 225
Query: 651 FT-TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYA 709
R ++APE I N + +SDV+SYG+ L E+ + P D S
Sbjct: 226 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-----SKF 280
Query: 710 FKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLE 764
+KM++EG L+ + ++ +K C D RP+ ++VQ++E
Sbjct: 281 YKMIKEG------FRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 326
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 499 KLGQGGFGSVYQ-GVLPDGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+LG G G V++ P G +A K LE + + E+ ++ + ++V G
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 134
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ E M GSLD+ + K + + + +++ KGL YL E +I+
Sbjct: 135 FYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIM 189
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+L++ K+ DFG++ + ++ F GTR Y++PE + S +S
Sbjct: 190 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 246
Query: 676 DVYSYGMVLLEIIGGRKNFDPNETSD 701
D++S G+ L+E+ GR P + +
Sbjct: 247 DIWSMGLSLVEMAVGRYPIPPPDAKE 272
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 32/291 (10%)
Query: 500 LGQGGFGSVYQGVLPD-----GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+GGF ++ D ++ K L +++ E+SI S+ H H+V G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
F + + E SL + K ++ L + E R+ + G YLH + R+
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 160
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH D+K N+ L+++ K+ DFGLA + + L GT Y+APE ++ S +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KVLCGTPNYIAPEVLSKKGHSFE 219
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDR 734
DV+S G ++ ++ G+ F ETS ++E LR I + +I + +
Sbjct: 220 VDVWSIGCIMYTLLVGKPPF---ETS-----------CLKETYLR-IKKNEYSIPKHINP 264
Query: 735 VFTAVKVALWCVQEDMSLRPSMTKVVQ---MLEGICPVPQPPTCSPLGARL 782
V A + +Q D + RP++ +++ G P P TC + R
Sbjct: 265 V--AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRF 313
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 32/291 (10%)
Query: 500 LGQGGFGSVYQGVLPD-----GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+GGF ++ D ++ K L +++ E+SI S+ H H+V G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
F + + E SL + K ++ L + E R+ + G YLH + R+
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 162
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH D+K N+ L+++ K+ DFGLA + + L GT Y+APE ++ S +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KVLCGTPNYIAPEVLSKKGHSFE 221
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDR 734
DV+S G ++ ++ G+ F ETS ++E LR I + +I + +
Sbjct: 222 VDVWSIGCIMYTLLVGKPPF---ETS-----------CLKETYLR-IKKNEYSIPKHINP 266
Query: 735 VFTAVKVALWCVQEDMSLRPSMTKVVQ---MLEGICPVPQPPTCSPLGARL 782
V A + +Q D + RP++ +++ G P P TC + R
Sbjct: 267 V--AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRF 315
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F +LG G FG V G +A+K ++ + EF E ++ ++ H LV+L G
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C + + E+MANG L ++ + F + + + + YL ++
Sbjct: 71 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQF 125
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D+ N L++D KVSDFGL++ + ++ +T+ G++ + PE +
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 672 SEKSDVYSYGMVLLEI 687
S KSD++++G+++ EI
Sbjct: 183 SSKSDIWAFGVLMWEI 198
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + + Y + + + +++ + + +T I + + LAY+H
Sbjct: 85 SGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 142
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 143 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGATD 199
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 200 YTSS--IDVWSAGCVLAELLLGQPIF 223
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 131/295 (44%), Gaps = 42/295 (14%)
Query: 495 NFSVKLGQGGFGSVYQ----GVLPD--GTRLAVKKLEGIGQ--GKKEFRAEVSIIGSI-H 545
+F LG G FG V + G++ +AVK L+ ++ +E+ ++ + +
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN 103
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-------------- 591
H+++V L G C G L+ E+ G L ++ +K F+ +
Sbjct: 104 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLE 163
Query: 592 -RFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ + AKG+A+L + IH D+ N+LL K+ DFGLA+ + + ++V
Sbjct: 164 DLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYV 220
Query: 651 FT-TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYA 709
R ++APE I N + +SDV+SYG+ L E+ + P D S
Sbjct: 221 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-----SKF 275
Query: 710 FKMMEEGKLRNILDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLE 764
+KM++EG L+ + ++ +K C D RP+ ++VQ++E
Sbjct: 276 YKMIKEG------FRMLSPEHAPAEMYDIMKT---CWDADPLKRPTFKQIVQLIE 321
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 98/203 (48%), Gaps = 16/203 (7%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQ--GKKEFR---AEVSIIGSIHHLHLVKLRG 554
+G+G FG V D ++ K + + E R E+ I+ + H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+ + + + G L ++ ++N F + F L A L YL +QRI
Sbjct: 83 SFQDEEDMFMVVDLLLGGDL-RYHLQQNVHFKEETVKLFICELVMA--LDYLQ---NQRI 136
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY---AI 671
IH D+KP+N+LLD++ H ++DF +A ++ RE TT+ GT+ Y+APE ++
Sbjct: 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMFSSRKGAGY 194
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF 694
S D +S G+ E++ GR+ +
Sbjct: 195 SFAVDWWSLGVTAYELLRGRRPY 217
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 101/211 (47%), Gaps = 24/211 (11%)
Query: 500 LGQGGFGSVYQGVLP-DGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V G G ++AVK L+ +G+ R E+ + H H++
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK----IRREIQNLKLFRHPHII 79
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + + + E+++ G L +I K + LD + + G+ Y H
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYICKNGR---LDEKESRRLFQQILSGVDYCHR-- 134
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN-- 668
++H D+KPENVLLD + +AK++DFGL+ +M+ G+ Y APE I+
Sbjct: 135 -HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRXSCGSPNYAAPEVISGRL 191
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNET 699
YA E D++S G++L ++ G FD +
Sbjct: 192 YAGPE-VDIWSSGVILYALLCGTLPFDDDHV 221
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F +LG G FG V G +A+K ++ + EF E ++ ++ H LV+L G
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C + + E+MANG L ++ + F + + + + YL ++
Sbjct: 87 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQF 141
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
+H D+ N L++D KVSDFGL++ + ++ + + PE + S K
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSK 201
Query: 675 SDVYSYGMVLLEI 687
SD++++G+++ EI
Sbjct: 202 SDIWAFGVLMWEI 214
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 499 KLGQGGFGSVY----QGVLPDGTRL--AVKKL-EGIGQGKKEFRAEVSIIGSIHHLHLVK 551
+LG+G FG V+ +LP+ ++ AVK L E +++F+ E ++ + H H+V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWI--FKKNQEFLLDWE----------TRFNIALGT 599
G C EG L+ +E+M +G L++++ + + L E +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVF--TTLRGT 657
A G+ YL +H D+ N L+ K+ DFG+++ + + T+
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
R ++ PE I + +SDV+S+G+VL EI
Sbjct: 225 R-WMPPESILYRKFTTESDVWSFGVVLWEI 253
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 104/211 (49%), Gaps = 27/211 (12%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR--LAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHL 549
LG+G FG V + G+ T +AVK L+ G E RA E+ I+ I HHL++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE-GATHSEHRALMSELKILIHIGHHLNV 95
Query: 550 VKLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL-----------LDWETRFNIAL 597
V L G C + G ++ EF G+L ++ K EF+ L E +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 598 GTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRG 656
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ V R
Sbjct: 156 QVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 657 TRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 26/216 (12%)
Query: 495 NFSVKLGQGGFGSVYQ------GVLPDGTRLAVKKLEGIGQG--KKEFRAEVSIIGSI-H 545
F LG G FG V + G ++AVK L+ K+ +E+ I+ +
Sbjct: 49 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK-------------NQEFLLDWETR 592
H ++V L G C G L+ E+ G L ++ +K N E L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
+ + A+G+A+L + IH D+ NVLL + + AK+ DFGLA+ + + +++
Sbjct: 169 LHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 225
Query: 653 -TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
R ++APE I + + +SDV+SYG++L EI
Sbjct: 226 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F +LG G FG V G +A+K ++ + EF E ++ ++ H LV+L G
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C + + E+MANG L ++ + F + + + + YL ++
Sbjct: 67 VCTKQRPIFIITEYMANGCLLNYLREMRHRF--QTQQLLEMCKDVCEAMEYLE---SKQF 121
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D+ N L++D KVSDFGL++ + ++ +T+ G++ + PE +
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 672 SEKSDVYSYGMVLLEI 687
S KSD++++G+++ EI
Sbjct: 179 SSKSDIWAFGVLMWEI 194
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 8/138 (5%)
Query: 564 LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPEN 623
+ E M GSLD+ + + + + E +++ +GLAYL E +I+H D+KP N
Sbjct: 91 ICMEHMDGGSLDQVLKEAKR---IPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSN 145
Query: 624 VLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMV 683
+L++ K+ DFG++ + ++ F GTR Y+APE + S +SD++S G+
Sbjct: 146 ILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMAPERLQGTHYSVQSDIWSMGLS 202
Query: 684 LLEIIGGRKNFDPNETSD 701
L+E+ GR P + +
Sbjct: 203 LVELAVGRYPIPPPDAKE 220
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 499 KLGQGGFGSVYQ-GVLPDGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+LG G G V++ P G +A K LE + + E+ ++ + ++V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ E M GSLD+ + K + + + +++ KGL YL E +I+
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIM 127
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+L++ K+ DFG++ + ++ F GTR Y++PE + S +S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 184
Query: 676 DVYSYGMVLLEIIGGRKNFDPNETSD 701
D++S G+ L+E+ GR P + +
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + QGK E+ I+ + H ++V+LR F +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---VLQGKAFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 142
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 143 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATD 199
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 200 YTSS--IDVWSAGCVLAELLLGQPIF 223
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F +LG G FG V G +A+K ++ + EF E ++ ++ H LV+L G
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C + + E+MANG L ++ + F + + + + YL ++
Sbjct: 72 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQF 126
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D+ N L++D KVSDFGL++ + ++ +T+ G++ + PE +
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 672 SEKSDVYSYGMVLLEI 687
S KSD++++G+++ EI
Sbjct: 184 SSKSDIWAFGVLMWEI 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 499 KLGQGGFGSVYQ-GVLPDGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+LG G G V++ P G +A K LE + + E+ ++ + ++V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ E M GSLD+ + K + + + +++ KGL YL E +I+
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIM 127
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+L++ K+ DFG++ + ++ F GTR Y++PE + S +S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 184
Query: 676 DVYSYGMVLLEIIGGRKNFDPNETSD 701
D++S G+ L+E+ GR P + +
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 129/291 (44%), Gaps = 32/291 (10%)
Query: 500 LGQGGFGSVYQGVLPD-----GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+GGF ++ D ++ K L +++ E+SI S+ H H+V G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
F + + E SL + K ++ L + E R+ + G YLH + R+
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN---RV 136
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH D+K N+ L+++ K+ DFGLA + + L GT Y+APE ++ S +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK-KVLCGTPNYIAPEVLSKKGHSFE 195
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDR 734
DV+S G ++ ++ G+ F ETS ++E LR I + +I + +
Sbjct: 196 VDVWSIGCIMYTLLVGKPPF---ETS-----------CLKETYLR-IKKNEYSIPKHINP 240
Query: 735 VFTAVKVALWCVQEDMSLRPSMTKVVQ---MLEGICPVPQPPTCSPLGARL 782
V A + +Q D + RP++ +++ G P P TC + R
Sbjct: 241 V--AASLIQKMLQTDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRF 289
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + QGK E+ I+ + H ++V+LR F +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---VLQGKAFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 142
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 143 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATD 199
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 200 YTSS--IDVWSAGCVLAELLLGQPIF 223
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
F +LG G FG V G +A+K ++ + EF E ++ ++ H LV+L G
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
C + + E+MANG L ++ + F + + + + YL ++
Sbjct: 78 VCTKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQF 132
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAI 671
+H D+ N L++D KVSDFGL++ + ++ +T+ G++ + PE +
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE---YTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 672 SEKSDVYSYGMVLLEI 687
S KSD++++G+++ EI
Sbjct: 190 SSKSDIWAFGVLMWEI 205
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 499 KLGQGGFGSVY----QGVLPDGTRL--AVKKL-EGIGQGKKEFRAEVSIIGSIHHLHLVK 551
+LG+G FG V+ +LP+ ++ AVK L E +++F+ E ++ + H H+V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKK--NQEFLLDWE----------TRFNIALGT 599
G C EG L+ +E+M +G L++++ + + L E +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVF--TTLRGT 657
A G+ YL +H D+ N L+ K+ DFG+++ + + T+
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
R ++ PE I + +SDV+S+G+VL EI
Sbjct: 202 R-WMPPESILYRKFTTESDVWSFGVVLWEI 230
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL-------------LDWETRFNIA 596
L G C + G ++ EF G+L ++ K EF+ L E +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLR 655
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ +V R
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 656 GTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 245
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL-------------LDWETRFNIA 596
L G C + G ++ EF G+L ++ K EF+ L E +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLR 655
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ +V R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 656 GTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 112
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 113 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 170
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 171 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATD 227
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 228 YTSS--IDVWSAGCVLAELLLGQPIF 251
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 97/196 (49%), Gaps = 11/196 (5%)
Query: 499 KLGQGGFGSVYQ-GVLPDGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+LG G G V++ P G +A K LE + + E+ ++ + ++V G
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 75
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ E M GSLD+ + K + + + +++ KGL YL E +I+
Sbjct: 76 FYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIM 130
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+L++ K+ DFG++ + E ++ F GTR Y++PE + S +S
Sbjct: 131 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV---GTRSYMSPERLQGTHYSVQS 187
Query: 676 DVYSYGMVLLEIIGGR 691
D++S G+ L+E+ GR
Sbjct: 188 DIWSMGLSLVEMAVGR 203
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 118
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 119 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 176
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V +R Y APE I T+
Sbjct: 177 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGATD 233
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 234 YTSS--IDVWSAGCVLAELLLGQPIF 257
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 12/207 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG G FG V G +AVK ++ + EF E + + H LVK G C++
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
+ E+++NG L ++ + L+ + +G+A+L + IH D
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLE---SHQFIHRD 129
Query: 619 IKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWITNYAISEKS 675
+ N L+D + KVSDFG+ + + +Q + + GT+ + APE + S KS
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQ---YVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 676 DVYSYGMVLLEIIG-GRKNFDPNETSD 701
DV+++G+++ E+ G+ +D S+
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSE 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 499 KLGQGGFGSVYQ-GVLPDGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+LG G G V++ P G +A K LE + + E+ ++ + ++V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ E M GSLD+ + K + + + +++ KGL YL E +I+
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIM 127
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+L++ K+ DFG++ + ++ F GTR Y++PE + S +S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 184
Query: 676 DVYSYGMVLLEIIGGRKNFDPNETSD 701
D++S G+ L+E+ GR P + +
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 499 KLGQGGFGSVYQ-GVLPDGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+LG G G V++ P G +A K LE + + E+ ++ + ++V G
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 72
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ E M GSLD+ + K + + + +++ KGL YL E +I+
Sbjct: 73 FYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIM 127
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+L++ K+ DFG++ + ++ F GTR Y++PE + S +S
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 184
Query: 676 DVYSYGMVLLEIIGGRKNFDPNETSD 701
D++S G+ L+E+ GR P + +
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 499 KLGQGGFGSVY----QGVLPDGTRL--AVKKL-EGIGQGKKEFRAEVSIIGSIHHLHLVK 551
+LG+G FG V+ +LP+ ++ AVK L E +++F+ E ++ + H H+V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKK--NQEFLLDWE----------TRFNIALGT 599
G C EG L+ +E+M +G L++++ + + L E +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVF--TTLRGT 657
A G+ YL +H D+ N L+ K+ DFG+++ + + T+
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
R ++ PE I + +SDV+S+G+VL EI
Sbjct: 196 R-WMPPESILYRKFTTESDVWSFGVVLWEI 224
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL-------------LDWETRFNIA 596
L G C + G ++ EF G+L ++ K EF+ L E +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLR 655
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ +V R
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 656 GTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 280
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 120
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 121 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 178
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 179 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATD 235
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 236 YTSS--IDVWSAGCVLAELLLGQPIF 259
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 118
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 119 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 176
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 177 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATD 233
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 234 YTSS--IDVWSAGCVLAELLLGQPIF 257
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 122
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 123 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 180
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 181 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATD 237
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 238 YTSS--IDVWSAGCVLAELLLGQPIF 261
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + QGK E+ I+ + H ++V+LR F +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---VLQGKAFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + +++ + + +T I + + LAY+H
Sbjct: 85 SGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 142
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 143 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGATD 199
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 200 YTSS--IDVWSAGCVLAELLLGQPIF 223
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 163
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 164 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 221
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 222 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATD 278
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 279 YTSS--IDVWSAGCVLAELLLGQPIF 302
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II ++H ++V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY----RKGGCAMLPVK 225
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 18/186 (9%)
Query: 516 GTRLAVKKLEGIGQGKKEFRAEVSIIGSIH-HLHLVKLRGFCAEGTHRLLAYEFMANGSL 574
RL+ ++LE + + R E I+ + H H++ L + L ++ M G L
Sbjct: 131 AERLSPEQLEEVREAT---RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGEL 187
Query: 575 DKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKV 634
++ +K L + ETR +I + +++LH + I+H D+KPEN+LLDDN ++
Sbjct: 188 FDYLTEKVA--LSEKETR-SIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRL 241
Query: 635 SDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI------TNYAISEKSDVYSYGMVLLEII 688
SDFG + + E L GT GYLAPE + T+ ++ D+++ G++L ++
Sbjct: 242 SDFGFSCHL--EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299
Query: 689 GGRKNF 694
G F
Sbjct: 300 AGSPPF 305
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL-------------LDWETRFNIA 596
L G C + G ++ EF G+L ++ K EF+ L E +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLR 655
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ +V R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 656 GTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II ++H ++V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY----RKGGCAMLPVK 211
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 89
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 90 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 147
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 148 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATD 204
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 205 YTSS--IDVWSAGCVLAELLLGQPIF 228
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 495 NFSVKLGQGGFGSVYQ------GVLPDGTRLAVKKLEGIGQG--KKEFRAEVSIIGSI-H 545
F LG G FG V + G ++AVK L+ K+ +E+ I+ +
Sbjct: 34 QFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQ 93
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL------------------- 586
H ++V L G C G L+ E+ G L ++ +K + L
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 587 -LDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR 645
L+ + + A+G+A+L + IH D+ NVLL + + AK+ DFGLA+ +
Sbjct: 154 PLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMN 210
Query: 646 EQSHVFT-TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
+ +++ R ++APE I + + +SDV+SYG++L EI
Sbjct: 211 DSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL-------------LDWETRFNIA 596
L G C + G ++ EF G+L ++ K EF+ L E +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLR 655
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ V R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 656 GTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 28/205 (13%)
Query: 500 LGQGGFGSVYQGVLP---DGT--RLAVKKL-EGIG-QGKKEFRAEVSIIGSIHHLHLVKL 552
LG+G FG V DGT +AVK L EG G Q + ++ E+ I+ +++H H+VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 553 RGFCAEGTHR--LLAYEFMANGSLDKWIFKKN---QEFLLDWETRFNIALGTAKGLAYLH 607
+G C + + L E++ GSL ++ + + LL A +G+AYLH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-------FAQQICEGMAYLH 129
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG----YLAP 663
Q IH + NVLLD++ K+ DFGLAK + + H + +R + AP
Sbjct: 130 A---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAP 184
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + SDV+S+G+ L E++
Sbjct: 185 ECLKECKFYYASDVWSFGVTLYELL 209
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 97
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 98 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 155
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 156 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATD 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 213 YTSS--IDVWSAGCVLAELLLGQPIF 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 102/212 (48%), Gaps = 27/212 (12%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL-------------LDWETRFNIA 596
L G C + G ++ EF G+L ++ K EF+ L E +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLR 655
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ +V R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 656 GTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 103
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 104 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 161
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 162 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGATD 218
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 219 YTSS--IDVWSAGCVLAELLLGQPIF 242
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 96
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 97 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 154
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 155 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGATD 211
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 212 YTSS--IDVWSAGCVLAELLLGQPIF 235
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 28/205 (13%)
Query: 500 LGQGGFGSVYQGVLP---DGT--RLAVKKL-EGIG-QGKKEFRAEVSIIGSIHHLHLVKL 552
LG+G FG V DGT +AVK L EG G Q + ++ E+ I+ +++H H+VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 553 RGFCAEGTHR--LLAYEFMANGSLDKWIFKKN---QEFLLDWETRFNIALGTAKGLAYLH 607
+G C + + L E++ GSL ++ + + LL A +G+AYLH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL-------FAQQICEGMAYLH 128
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG----YLAP 663
Q IH + NVLLD++ K+ DFGLAK + + H + +R + AP
Sbjct: 129 A---QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVP--EGHEYYRVREDGDSPVFWYAP 183
Query: 664 EWITNYAISEKSDVYSYGMVLLEII 688
E + SDV+S+G+ L E++
Sbjct: 184 ECLKECKFYYASDVWSFGVTLYELL 208
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 92
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 93 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 150
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 151 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGATD 207
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 208 YTSS--IDVWSAGCVLAELLLGQPIF 231
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 104/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 96
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 97 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 154
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V +R Y APE I T+
Sbjct: 155 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC--SRYYRAPELIFGATD 211
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 212 YTSS--IDVWSAGCVLAELLLGQPIF 235
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 32/291 (10%)
Query: 500 LGQGGFGSVYQGVLPD-----GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+GGF Y+ D ++ K + K++ E++I S+ + H+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
F + + E SL + K ++ + + E R+ + T +G+ YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMR-QTIQGVQYLH---NNRV 163
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH D+K N+ L+D+ K+ DFGLA + + L GT Y+APE + S +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KXLCGTPNYIAPEVLCKKGHSFE 222
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDR 734
D++S G +L ++ G+ F ETS ++E +R I + ++ +
Sbjct: 223 VDIWSLGCILYTLLVGKPPF---ETS-----------CLKETYIR-IKKNEYSVPRHINP 267
Query: 735 VFTAVKVALWCVQEDMSLRPSMTKVVQ---MLEGICPVPQPPTCSPLGARL 782
V +A+ + + D +LRPS+ +++ G P+ P +C + R
Sbjct: 268 VASALIRRM--LHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPPRF 316
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 11/206 (5%)
Query: 499 KLGQGGFGSVYQ-GVLPDGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+LG G G V++ P G +A K LE + + E+ ++ + ++V G
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 99
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ E M GSLD+ + K + + + +++ KGL YL E +I+
Sbjct: 100 FYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIM 154
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+L++ K+ DFG++ + ++ F GTR Y++PE + S +S
Sbjct: 155 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 211
Query: 676 DVYSYGMVLLEIIGGRKNFDPNETSD 701
D++S G+ L+E+ GR P + +
Sbjct: 212 DIWSMGLSLVEMAVGRYPIPPPDAKE 237
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 142
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 143 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGATD 199
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 200 YTSS--IDVWSAGCVLAELLLGQPIF 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 123/252 (48%), Gaps = 31/252 (12%)
Query: 450 AIRYVRKKRKAPESPQETSEEDNFLENLSGMPVRFTYRD-LQTATNNFSVKLGQGGFGSV 508
A R R + +P++ E +E E L PV + YR+ + AT+ +LG+G FG V
Sbjct: 56 AARGSRSREPSPKT--EDNEGVLLTEKLK--PVDYEYREEVHWATHQL--RLGRGSFGEV 109
Query: 509 YQGVLPD---GTRLAVKKLEGIGQGKKEFRAE-VSIIGSIHHLHLVKLRGFCAEGTHRLL 564
++ + D G + AVKK+ + FRAE + + +V L G EG +
Sbjct: 110 HR--MEDKQTGFQCAVKKVR-----LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNI 162
Query: 565 AYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-KGLAYLHEDCDQRIIHCDIKPEN 623
E + GSL + + K Q L E R LG A +GL YLH +RI+H D+K +N
Sbjct: 163 FMELLEGGSLGQLV--KEQGCLP--EDRALYYLGQALEGLEYLH---SRRILHGDVKADN 215
Query: 624 VLLD-DNYHAKVSDFGLAKLMTREQ--SHVFTT--LRGTRGYLAPEWITNYAISEKSDVY 678
VLL D HA + DFG A + + + T + GT ++APE + + K DV+
Sbjct: 216 VLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 275
Query: 679 SYGMVLLEIIGG 690
S ++L ++ G
Sbjct: 276 SSCCMMLHMLNG 287
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 142
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 143 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SYICSRYYRAPELIFGATD 199
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 200 YTSS--IDVWSAGCVLAELLLGQPIF 223
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 85
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 86 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 143
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 144 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGATD 200
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 201 YTSS--IDVWSAGCVLAELLLGQPIF 224
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRA----EVSIIGSIHHLHLVKLRG 554
LG+G FG V G ++A+K + K + + E+S + + H H++KL
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
++ E+ N D +I ++++ + + E R + Y H +I
Sbjct: 82 VIKSKDEIIMVIEYAGNELFD-YIVQRDK--MSEQEAR-RFFQQIISAVEYCHR---HKI 134
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN--YAIS 672
+H D+KPEN+LLD++ + K++DFGL+ +MT + T G+ Y APE I+ YA
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVISGKLYAGP 192
Query: 673 EKSDVYSYGMVLLEIIGGRKNFD 695
E DV+S G++L ++ R FD
Sbjct: 193 E-VDVWSCGVILYVMLCRRLPFD 214
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL-------------LDWETRFNIA 596
L G C + G ++ EF G+L ++ K EF+ L E +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLR 655
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ V R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 656 GTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 84
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 85 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 142
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 143 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGATD 199
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 200 YTSS--IDVWSAGCVLAELLLGQPIF 223
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 128
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY----RKGGCAMLPVK 210
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY----RKGGCAMLPVK 210
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 32/291 (10%)
Query: 500 LGQGGFGSVYQGVLPD-----GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+GGF Y+ D ++ K + K++ E++I S+ + H+V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
F + + E SL + K ++ + + E R+ + T +G+ YLH + R+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMR-QTIQGVQYLH---NNRV 163
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH D+K N+ L+D+ K+ DFGLA + + L GT Y+APE + S +
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KDLCGTPNYIAPEVLCKKGHSFE 222
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDR 734
D++S G +L ++ G+ F ETS ++E +R I + ++ +
Sbjct: 223 VDIWSLGCILYTLLVGKPPF---ETS-----------CLKETYIR-IKKNEYSVPRHINP 267
Query: 735 VFTAVKVALWCVQEDMSLRPSMTKVVQ---MLEGICPVPQPPTCSPLGARL 782
V +A+ + + D +LRPS+ +++ G P+ P +C + R
Sbjct: 268 VASALIRRM--LHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPPRF 316
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL-------------LDWETRFNIA 596
L G C + G ++ EF G+L ++ K EF+ L E +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLR 655
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ V R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 656 GTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRA----EVSIIGSIHHLHLVKLRG 554
LG+G FG V G ++A+K + K + + E+S + + H H++KL
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
++ E+ N D +I ++++ + + E R + Y H +I
Sbjct: 72 VIKSKDEIIMVIEYAGNELFD-YIVQRDK--MSEQEAR-RFFQQIISAVEYCHR---HKI 124
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN--YAIS 672
+H D+KPEN+LLD++ + K++DFGL+ +MT + T G+ Y APE I+ YA
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVISGKLYAGP 182
Query: 673 EKSDVYSYGMVLLEIIGGRKNFD 695
E DV+S G++L ++ R FD
Sbjct: 183 E-VDVWSCGVILYVMLCRRLPFD 204
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRA----EVSIIGSIHHLHLVKLRG 554
LG+G FG V G ++A+K + K + + E+S + + H H++KL
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
++ E+ N D +I ++++ + + E R + Y H +I
Sbjct: 81 VIKSKDEIIMVIEYAGNELFD-YIVQRDK--MSEQEAR-RFFQQIISAVEYCHR---HKI 133
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN--YAIS 672
+H D+KPEN+LLD++ + K++DFGL+ +MT + T G+ Y APE I+ YA
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVISGKLYAGP 191
Query: 673 EKSDVYSYGMVLLEIIGGRKNFD 695
E DV+S G++L ++ R FD
Sbjct: 192 E-VDVWSCGVILYVMLCRRLPFD 213
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 32/291 (10%)
Query: 500 LGQGGFGSVYQGVLPD-----GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+GGF Y+ D ++ K + K++ E++I S+ + H+V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
F + + E SL + K ++ + + E R+ + T +G+ YLH + R+
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMR-QTIQGVQYLH---NNRV 147
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH D+K N+ L+D+ K+ DFGLA + + L GT Y+APE + S +
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KDLCGTPNYIAPEVLCKKGHSFE 206
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDR 734
D++S G +L ++ G+ F ETS ++E +R I + ++ +
Sbjct: 207 VDIWSLGCILYTLLVGKPPF---ETS-----------CLKETYIR-IKKNEYSVPRHINP 251
Query: 735 VFTAVKVALWCVQEDMSLRPSMTKVVQ---MLEGICPVPQPPTCSPLGARL 782
V +A+ + + D +LRPS+ +++ G P+ P +C + R
Sbjct: 252 VASALIRRM--LHADPTLRPSVAELLTDEFFTSGYAPMRLPTSCLTVPPRF 300
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 27/212 (12%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL-------------LDWETRFNIA 596
L G C + G ++ EF G+L ++ K EF+ L E +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLR 655
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ V R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 656 GTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 107/220 (48%), Gaps = 24/220 (10%)
Query: 484 FTYRDLQTATNNFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGK--KEFRAEVSI 540
FT DL+ ++G+G +GSV + V P G +AVK++ K K+ ++ +
Sbjct: 19 FTAEDLKDLG-----EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDV 73
Query: 541 I-GSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD----WETRFNI 595
+ S ++V+ G + E M+ S DK F K +LD E I
Sbjct: 74 VMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDK--FYKYVYSVLDDVIPEEILGKI 130
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR 655
L T K L +L E+ +IIH DIKP N+LLD + + K+ DFG++ + S T
Sbjct: 131 TLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV--DSIAKTRDA 186
Query: 656 GTRGYLAPEWITNYAISE----KSDVYSYGMVLLEIIGGR 691
G R Y+APE I A + +SDV+S G+ L E+ GR
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY----RKGGCAMLPVK 211
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY----RKGGCAMLPVK 202
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY----RKGGCAMLPVK 227
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 123/252 (48%), Gaps = 31/252 (12%)
Query: 450 AIRYVRKKRKAPESPQETSEEDNFLENLSGMPVRFTYRD-LQTATNNFSVKLGQGGFGSV 508
A R R + +P++ E +E E L PV + YR+ + AT+ +LG+G FG V
Sbjct: 37 AARGSRSREPSPKT--EDNEGVLLTEKLK--PVDYEYREEVHWATHQL--RLGRGSFGEV 90
Query: 509 YQGVLPD---GTRLAVKKLEGIGQGKKEFRAE-VSIIGSIHHLHLVKLRGFCAEGTHRLL 564
++ + D G + AVKK+ + FRAE + + +V L G EG +
Sbjct: 91 HR--MEDKQTGFQCAVKKVR-----LEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNI 143
Query: 565 AYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-KGLAYLHEDCDQRIIHCDIKPEN 623
E + GSL + + K Q L E R LG A +GL YLH +RI+H D+K +N
Sbjct: 144 FMELLEGGSLGQLV--KEQGCLP--EDRALYYLGQALEGLEYLH---SRRILHGDVKADN 196
Query: 624 VLLD-DNYHAKVSDFGLAKLMTREQ--SHVFTT--LRGTRGYLAPEWITNYAISEKSDVY 678
VLL D HA + DFG A + + + T + GT ++APE + + K DV+
Sbjct: 197 VLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 256
Query: 679 SYGMVLLEIIGG 690
S ++L ++ G
Sbjct: 257 SSCCMMLHMLNG 268
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY----RKGGCAMLPVK 225
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 17/203 (8%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRA----EVSIIGSIHHLHLVKLRG 554
LG+G FG V G ++A+K + K + + E+S + + H H++KL
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
++ E+ N D +I ++++ + + E R + Y H +I
Sbjct: 76 VIKSKDEIIMVIEYAGNELFD-YIVQRDK--MSEQEAR-RFFQQIISAVEYCHR---HKI 128
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN--YAIS 672
+H D+KPEN+LLD++ + K++DFGL+ +MT + T G+ Y APE I+ YA
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMT--DGNFLKTSCGSPNYAAPEVISGKLYAGP 186
Query: 673 EKSDVYSYGMVLLEIIGGRKNFD 695
E DV+S G++L ++ R FD
Sbjct: 187 E-VDVWSCGVILYVMLCRRLPFD 208
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 105/206 (50%), Gaps = 21/206 (10%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF-CA 557
+G G FG VYQ L D G +A+KK + Q K+ E+ I+ + H ++V+LR F +
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKK---VLQDKRFKNRELQIMRKLDHCNIVRLRYFFYS 88
Query: 558 EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-----KGLAYLHEDCDQ 612
G + Y + + + +++ + + +T I + + LAY+H
Sbjct: 89 SGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-- 146
Query: 613 RIIHCDIKPENVLLD-DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TN 668
I H DIKP+N+LLD D K+ DFG AK + R + +V + +R Y APE I T+
Sbjct: 147 -ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV--SXICSRYYRAPELIFGATD 203
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
Y S DV+S G VL E++ G+ F
Sbjct: 204 YTSS--IDVWSAGCVLAELLLGQPIF 227
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 21/231 (9%)
Query: 477 LSGMPVR-FTYRDLQTATNNFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKE-- 533
L+ MP R FT D + LG+G FG+VY + K+ Q +KE
Sbjct: 4 LAEMPKRKFTIDDF-----DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV 58
Query: 534 ---FRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
R E+ I + H +++++ + + L EF G L K + K + D +
Sbjct: 59 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQ 115
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
A L Y HE +++IH DIKPEN+L+ K++DFG + S
Sbjct: 116 RSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLR 169
Query: 651 FTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFD-PNETS 700
+ GT YL PE I EK D++ G++ E + G FD P+ T
Sbjct: 170 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY----RKGGCAMLPVK 217
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 99/231 (42%), Gaps = 21/231 (9%)
Query: 477 LSGMPVR-FTYRDLQTATNNFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKE-- 533
L+ MP R FT D LG+G FG+VY + K+ Q +KE
Sbjct: 3 LAEMPKRKFTIDDFDIVR-----PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV 57
Query: 534 ---FRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
R E+ I + H +++++ + + L EF G L K + K + D +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQ 114
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
A L Y HE +++IH DIKPEN+L+ K++DFG + S
Sbjct: 115 RSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLR 168
Query: 651 FTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFD-PNETS 700
+ GT YL PE I EK D++ G++ E + G FD P+ T
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 100/231 (43%), Gaps = 21/231 (9%)
Query: 477 LSGMPVR-FTYRDLQTATNNFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKE-- 533
L+ MP R FT D + LG+G FG+VY + K+ Q +KE
Sbjct: 3 LAEMPKRKFTIDDF-----DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV 57
Query: 534 ---FRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
R E+ I + H +++++ + + L EF G L K + K + D +
Sbjct: 58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQ 114
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
A L Y HE +++IH DIKPEN+L+ K++DFG + S
Sbjct: 115 RSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWS---VHAPSLR 168
Query: 651 FTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFD-PNETS 700
+ GT YL PE I EK D++ G++ E + G FD P+ T
Sbjct: 169 RRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 128
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 188
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYY----RKGGCAMLPVK 211
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY----RKGGCAMLPVK 225
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 20/219 (9%)
Query: 500 LGQGGFGSVYQGVLPDGTR----LAVKKLEGIG--QGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G FG VY G D + A+K L I Q + F E ++ ++H +++ L
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 554 GFC--AEGT-HRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
G EG H LL Y M +G L ++I + + + + L A+G+ YL E
Sbjct: 89 GIMLPPEGLPHVLLPY--MCHGDLLQFIRSPQRNPTV--KDLISFGLQVARGMEYLAE-- 142
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR---GYLAPEWIT 667
Q+ +H D+ N +LD+++ KV+DFGLA+ + + + R R + A E +
Sbjct: 143 -QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQ 201
Query: 668 NYAISEKSDVYSYGMVLLEIIG-GRKNFDPNETSDKAHF 705
Y + KSDV+S+G++L E++ G + + D HF
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHF 240
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 128
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 128
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 128
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY----RKGGCAMLPVK 251
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 128
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTR---------LAVKKLEGIGQGKKEFRAEVSIIGSIH 545
+F LG G F V +L + R +A K LEG +G E E++++ I
Sbjct: 21 DFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEG-KEGSME--NEIAVLHKIK 74
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
H ++V L G H L + ++ G L I +K F + + + + Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDAS-RLIFQVLDAVKY 131
Query: 606 LHEDCDQRIIHCDIKPENVL---LDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
LH D I+H D+KPEN+L LD++ +SDFGL+K+ + V +T GT GY+A
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVA 186
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNF-DPNET 699
PE + S+ D +S G++ ++ G F D N+
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY----RKGGCAMLPVK 228
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 499 KLGQGGFGSVYQGVLP------DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG G FG+V +G +K K E AE +++ + + ++V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G C E +L E G L+K++ Q + + + + G+ YL E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 146
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYA 670
+H D+ NVLL ++AK+SDFGL+K + ++++ G + APE I Y
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 671 ISEKSDVYSYGMVLLE 686
S KSDV+S+G+++ E
Sbjct: 207 FSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 499 KLGQGGFGSVYQGVLP------DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG G FG+V +G +K K E AE +++ + + ++V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G C E +L E G L+K++ Q + + + + G+ YL E
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEE---S 146
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYA 670
+H D+ NVLL ++AK+SDFGL+K + ++++ G + APE I Y
Sbjct: 147 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 206
Query: 671 ISEKSDVYSYGMVLLE 686
S KSDV+S+G+++ E
Sbjct: 207 FSSKSDVWSFGVLMWE 222
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVK 551
LG G FG VY+G + P ++AVK L + Q + +F E II +H ++V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIF----KKNQEFLLDWETRFNIALGTAKGLAYLH 607
G + R + E MA G L ++ + +Q L ++A A G YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 608 EDCDQRIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
E+ IH DI N LL AK+ DFG+A+ + R + +G L +
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY----RKGGCAMLPVK 237
Query: 665 WITNYAISE-----KSDVYSYGMVLLEI 687
W+ A E K+D +S+G++L EI
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 126
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 186
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 187 VDVWSCGIVLTAMLAGELPWD 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 500 LGQGGFGSVYQGVLP-DGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V G G ++AVK L+ +G+ K+E + + H H++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN----LKLFRHPHII 74
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + T + E+++ G L +I K + ++ F L Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD---YCHR-- 129
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN-- 668
++H D+KPENVLLD + +AK++DFGL+ +M+ T G+ Y APE I+
Sbjct: 130 -HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRTSCGSPNYAAPEVISGRL 186
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFD 695
YA E D++S G++L ++ G FD
Sbjct: 187 YAGPE-VDIWSCGVILYALLCGTLPFD 212
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 128
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 128
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 188
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 189 VDVWSCGIVLTAMLAGELPWD 209
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 500 LGQGGFGSVYQGVL--PDGTRLAV--KKLEGIGQG--KKEFRAEVSIIGSIHHLHLVKLR 553
+G+G FG V+QG+ P+ LAV K + +++F E + H H+VKL
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G E ++ E G L F + +++ LD + A + LAYL +R
Sbjct: 106 GVITENPVWIIM-ELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTALAYLE---SKR 159
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYAI 671
+H DI NVL+ N K+ DFGL++ M E S + +G ++APE I
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 672 SEKSDVYSYGMVLLEII-GGRKNFDPNETSD 701
+ SDV+ +G+ + EI+ G K F + +D
Sbjct: 218 TSASDVWMFGVCMWEILMHGVKPFQGVKNND 248
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 122/277 (44%), Gaps = 34/277 (12%)
Query: 499 KLGQGGFGSVYQGVL-PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G+G FG V+ G L D T +AVK K +F E I+ H ++V+L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
C + + E + G D F + + L +T + A G+ YL C I
Sbjct: 181 CTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTR----GYLAPEWITNYA 670
H D+ N L+ + K+SDFG M+RE++ V+ G R + APE +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFG----MSREEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDE 730
S +SDV+S+G++L E + PN ++ + + +E+G RL E
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLSNQQTR------EFVEKG-------GRLPCPE 338
Query: 731 Q-SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
D VF ++ C + RPS + + Q L+ I
Sbjct: 339 LCPDAVFRLMEQ---CWAYEPGQRPSFSTIYQELQSI 372
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G +G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 499 KLGQGGFGSVYQGVLP------DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG G FG+V +G +K K E AE +++ + + ++V++
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G C E +L E G L+K++ Q + + + + G+ YL E
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEES--- 488
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT--RGYLAPEWITNYA 670
+H D+ NVLL ++AK+SDFGL+K + ++++ G + APE I Y
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 548
Query: 671 ISEKSDVYSYGMVLLE 686
S KSDV+S+G+++ E
Sbjct: 549 FSSKSDVWSFGVLMWE 564
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 499 KLGQGGFGSVYQGVLP------DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG G FG+V +G +K K E AE +++ + + ++V++
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G C E +L E G L+K++ Q + + + + G+ YL E
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEES--- 144
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYA 670
+H D+ NVLL ++AK+SDFGL+K + ++++ G + APE I Y
Sbjct: 145 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 204
Query: 671 ISEKSDVYSYGMVLLE 686
S KSDV+S+G+++ E
Sbjct: 205 FSSKSDVWSFGVLMWE 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 99/227 (43%), Gaps = 15/227 (6%)
Query: 474 LENLSGMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKE 533
+EN SG P T R LG+G FG+VY + K+ Q +KE
Sbjct: 6 MENSSGTPDILT-RHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKE 64
Query: 534 -----FRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLD 588
R E+ I +HH ++++L + + L E+ G L K + K D
Sbjct: 65 GVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT---FD 121
Query: 589 WETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQS 648
+ I A L Y H +++IH DIKPEN+LL K++DFG + S
Sbjct: 122 EQRTATIMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWS---VHAPS 175
Query: 649 HVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
T+ GT YL PE I +EK D++ G++ E++ G F+
Sbjct: 176 LRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 499 KLGQGGFGSVYQGVLP------DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG G FG+V +G +K K E AE +++ + + ++V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G C E +L E G L+K++ Q + + + + G+ YL E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEES--- 130
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYA 670
+H D+ NVLL ++AK+SDFGL+K + ++++ G + APE I Y
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 190
Query: 671 ISEKSDVYSYGMVLLE 686
S KSDV+S+G+++ E
Sbjct: 191 FSSKSDVWSFGVLMWE 206
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 499 KLGQGGFGSVYQGVLP------DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG G FG+V +G +K K E AE +++ + + ++V++
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G C E +L E G L+K++ Q + + + + G+ YL E
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEES--- 489
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT--RGYLAPEWITNYA 670
+H D+ NVLL ++AK+SDFGL+K + ++++ G + APE I Y
Sbjct: 490 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 549
Query: 671 ISEKSDVYSYGMVLLE 686
S KSDV+S+G+++ E
Sbjct: 550 FSSKSDVWSFGVLMWE 565
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 500 LGQGGFGSVYQGVL--PDGTRLAV--KKLEGIGQG--KKEFRAEVSIIGSIHHLHLVKLR 553
+G+G FG V+QG+ P+ LAV K + +++F E + H H+VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G E ++ E G L F + +++ LD + A + LAYL +R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTALAYLE---SKR 131
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYAI 671
+H DI NVL+ N K+ DFGL++ M E S + +G ++APE I
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 672 SEKSDVYSYGMVLLEII-GGRKNFDPNETSD 701
+ SDV+ +G+ + EI+ G K F + +D
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 20/228 (8%)
Query: 498 VKLGQGGFGSV-YQGVLPDGTRLAVKKLEGIGQGKKEFR-AEVSIIGSIHHLHLVKLRGF 555
VK+G+G G V G ++AVK ++ Q ++E EV I+ H ++V++
Sbjct: 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
G + EF+ G+L + + L+ E + + LAYLH Q +I
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIV----SQVRLNEEQIATVCEAVLQALAYLHA---QGVI 163
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H DIK +++LL + K+SDFG ++++ L GT ++APE I+ + +
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLYATEV 222
Query: 676 DVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEG---KLRN 720
D++S G++++E++ G +P SD P A K + + KL+N
Sbjct: 223 DIWSLGIMVIEMVDG----EPPYFSDS---PVQAMKRLRDSPPPKLKN 263
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 499 KLGQGGFGSVYQGVLP------DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG G FG+V +G +K K E AE +++ + + ++V++
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G C E +L E G L+K++ Q + + + + G+ YL E
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEES--- 124
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYA 670
+H D+ NVLL ++AK+SDFGL+K + ++++ G + APE I Y
Sbjct: 125 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 184
Query: 671 ISEKSDVYSYGMVLLE 686
S KSDV+S+G+++ E
Sbjct: 185 FSSKSDVWSFGVLMWE 200
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 499 KLGQGGFGSVYQGVLP------DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG G FG+V +G +K K E AE +++ + + ++V++
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G C E +L E G L+K++ Q + + + + G+ YL E
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEES--- 126
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYA 670
+H D+ NVLL ++AK+SDFGL+K + ++++ G + APE I Y
Sbjct: 127 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 186
Query: 671 ISEKSDVYSYGMVLLE 686
S KSDV+S+G+++ E
Sbjct: 187 FSSKSDVWSFGVLMWE 202
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 500 LGQGGFGSVYQGVL--PDGTRLAV--KKLEGIGQG--KKEFRAEVSIIGSIHHLHLVKLR 553
+G+G FG V+QG+ P+ LAV K + +++F E + H H+VKL
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G E ++ E G L F + +++ LD + A + LAYL +R
Sbjct: 83 GVITENPVWIIM-ELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTALAYLE---SKR 136
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYAI 671
+H DI NVL+ N K+ DFGL++ M E S + +G ++APE I
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 672 SEKSDVYSYGMVLLEII-GGRKNFDPNETSD 701
+ SDV+ +G+ + EI+ G K F + +D
Sbjct: 195 TSASDVWMFGVCMWEILMHGVKPFQGVKNND 225
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 96/196 (48%), Gaps = 11/196 (5%)
Query: 499 KLGQGGFGSVYQ-GVLPDGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+LG G G V++ P G +A K LE + + E+ ++ + ++V G
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGA 91
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ E M GSLD+ + K + + + +++ KGL YL E +I+
Sbjct: 92 FYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYLREK--HKIM 146
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+L++ K+ DFG++ + ++ F GTR Y++PE + S +S
Sbjct: 147 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV---GTRSYMSPERLQGTHYSVQS 203
Query: 676 DVYSYGMVLLEIIGGR 691
D++S G+ L+E+ GR
Sbjct: 204 DIWSMGLSLVEMAVGR 219
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 500 LGQGGFGSVYQGVL--PDGTRLAV--KKLEGIGQG--KKEFRAEVSIIGSIHHLHLVKLR 553
+G+G FG V+QG+ P+ LAV K + +++F E + H H+VKL
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G E ++ E G L F + +++ LD + A + LAYL +R
Sbjct: 75 GVITENPVWIIM-ELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTALAYLE---SKR 128
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYAI 671
+H DI NVL+ N K+ DFGL++ M E S + +G ++APE I
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 672 SEKSDVYSYGMVLLEII-GGRKNFDPNETSD 701
+ SDV+ +G+ + EI+ G K F + +D
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQGVKNND 217
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 15/196 (7%)
Query: 499 KLGQGGFGSVYQGVLP------DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG G FG+V +G +K K E AE +++ + + ++V++
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G C E +L E G L+K++ Q + + + + G+ YL E
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEES--- 136
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYA 670
+H D+ NVLL ++AK+SDFGL+K + ++++ G + APE I Y
Sbjct: 137 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYK 196
Query: 671 ISEKSDVYSYGMVLLE 686
S KSDV+S+G+++ E
Sbjct: 197 FSSKSDVWSFGVLMWE 212
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 500 LGQGGFGSVYQGVL--PDGTRLAV--KKLEGIGQG--KKEFRAEVSIIGSIHHLHLVKLR 553
+G+G FG V+QG+ P+ LAV K + +++F E + H H+VKL
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G E ++ E G L F + +++ LD + A + LAYL +R
Sbjct: 81 GVITENPVWIIM-ELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTALAYLE---SKR 134
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYAI 671
+H DI NVL+ N K+ DFGL++ M E S + +G ++APE I
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 672 SEKSDVYSYGMVLLEII-GGRKNFDPNETSD 701
+ SDV+ +G+ + EI+ G K F + +D
Sbjct: 193 TSASDVWMFGVCMWEILMHGVKPFQGVKNND 223
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 22/235 (9%)
Query: 467 TSEEDNFLENLS-----GMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVL--PDGTRL 519
SE D++ E + MP Y ++Q +G+G FG V+QG+ P+ +
Sbjct: 361 VSETDDYAEIIDEEDTYTMPSTRDY-EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAM 419
Query: 520 AV--KKLEGIGQG--KKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLD 575
AV K + +++F E + H H+VKL G E ++ E G L
Sbjct: 420 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELR 478
Query: 576 KWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVS 635
F + ++F LD + A + LAYL +R +H DI NVL+ N K+
Sbjct: 479 S--FLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLG 533
Query: 636 DFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYAISEKSDVYSYGMVLLEII 688
DFGL++ M E S + +G ++APE I + SDV+ +G+ + EI+
Sbjct: 534 DFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 111/231 (48%), Gaps = 30/231 (12%)
Query: 479 GMPVRFTYRDLQTATNNFSV-KLGQGGFGSVYQGVLPDG-TRLAVKKLE----------- 525
GM VR ++ + + F V KLG G +G V +G + A+K ++
Sbjct: 24 GMYVR--KKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSD 81
Query: 526 ---GIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKN 582
I + +E E+S++ S+ H +++KL + + L EF G L + I ++
Sbjct: 82 DNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH 141
Query: 583 QEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDN---YHAKVSDFGL 639
+ D NI G+ YLH+ I+H DIKPEN+LL++ + K+ DFGL
Sbjct: 142 K---FDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGL 195
Query: 640 AKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
+ +++ + GT Y+APE + +EK DV+S G+++ ++ G
Sbjct: 196 SSFFSKD--YKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 500 LGQGGFGSVYQGVL--PDGTRLAV--KKLEGIGQG--KKEFRAEVSIIGSIHHLHLVKLR 553
+G+G FG V+QG+ P+ LAV K + +++F E + H H+VKL
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G E ++ E G L F + +++ LD + A + LAYL +R
Sbjct: 80 GVITENPVWIIM-ELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTALAYLE---SKR 133
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYAI 671
+H DI NVL+ N K+ DFGL++ M E S + +G ++APE I
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 672 SEKSDVYSYGMVLLEII-GGRKNFDPNETSD 701
+ SDV+ +G+ + EI+ G K F + +D
Sbjct: 192 TSASDVWMFGVCMWEILMHGVKPFQGVKNND 222
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 21/239 (8%)
Query: 488 DLQTATNNFSVKLGQGGFGSVYQGV-LPDGTRLAVKKL-EGIGQGKKEFRAEVSIIGSIH 545
D + N V LG+G +G VY G L + R+A+K++ E + + E+++ +
Sbjct: 18 DYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK 77
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLD-----KWIFKKNQEFLLDWETRFNIALGTA 600
H ++V+ G +E + E + GSL KW K+ E + + T+
Sbjct: 78 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QIL 132
Query: 601 KGLAYLHEDCDQRIIHCDIKPENVLLDDNYHA--KVSDFGLAKLMTREQSHVFTTLRGTR 658
+GL YLH D +I+H DIK +NVL+ + Y K+SDFG +K + + T GT
Sbjct: 133 EGLKYLH---DNQIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAG-INPCTETFTGTL 187
Query: 659 GYLAPEWITN--YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEE 715
Y+APE I + +D++S G ++E+ G+ F A F FK+ E
Sbjct: 188 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE 246
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 10/202 (4%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEG--IGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
+G GGF V + G +A+K ++ +G + E+ + ++ H H+ +L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
+ E+ G L +I +Q+ L + ETR + +AY+H Q H
Sbjct: 78 ETANKIFMVLEYCPGGELFDYII--SQDRLSEEETRV-VFRQIVSAVAYVHS---QGYAH 131
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA-ISEKS 675
D+KPEN+L D+ + K+ DFGL + + T G+ Y APE I + + ++
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEA 191
Query: 676 DVYSYGMVLLEIIGGRKNFDPN 697
DV+S G++L ++ G FD +
Sbjct: 192 DVWSMGILLYVLMCGFLPFDDD 213
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGVL--PDGTRLAV--KKLEGIGQG--KKEFRAEVSIIGSIHHLHLVKLR 553
+G+G FG V+QG+ P+ +AV K + +++F E + H H+VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G E ++ E G L F + ++F LD + A + LAYL +R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRS--FLQVRKFSLDLASLILYAYQLSTALAYLE---SKR 131
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG-----YLAPEWITN 668
+H DI NVL+ N K+ DFGL++ M E S T + ++G ++APE I
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDS---TXXKASKGKLPIKWMAPESINF 186
Query: 669 YAISEKSDVYSYGMVLLEII-GGRKNFDPNETSD 701
+ SDV+ +G+ + EI+ G K F + +D
Sbjct: 187 RRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTR---------LAVKKLEGIGQGKKEFRAEVSIIGSIH 545
+F LG G F V +L + R +A + LEG +G E E++++ I
Sbjct: 21 DFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEG-KEGSME--NEIAVLHKIK 74
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
H ++V L G H L + ++ G L I +K F + + + + Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDAS-RLIFQVLDAVKY 131
Query: 606 LHEDCDQRIIHCDIKPENVL---LDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
LH D I+H D+KPEN+L LD++ +SDFGL+K+ + V +T GT GY+A
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVA 186
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNF-DPNET 699
PE + S+ D +S G++ ++ G F D N+
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 112/239 (46%), Gaps = 21/239 (8%)
Query: 488 DLQTATNNFSVKLGQGGFGSVYQGV-LPDGTRLAVKKL-EGIGQGKKEFRAEVSIIGSIH 545
D + N V LG+G +G VY G L + R+A+K++ E + + E+++ +
Sbjct: 4 DYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK 63
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLD-----KWIFKKNQEFLLDWETRFNIALGTA 600
H ++V+ G +E + E + GSL KW K+ E + + T+
Sbjct: 64 HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QIL 118
Query: 601 KGLAYLHEDCDQRIIHCDIKPENVLLDDNYHA--KVSDFGLAKLMTREQSHVFTTLRGTR 658
+GL YLH D +I+H DIK +NVL+ + Y K+SDFG +K + T GT
Sbjct: 119 EGLKYLH---DNQIVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINP-CTETFTGTL 173
Query: 659 GYLAPEWITN--YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEE 715
Y+APE I + +D++S G ++E+ G+ F A F FK+ E
Sbjct: 174 QYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPE 232
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V TR+A+KK+ E ++ R E+ I+ H +++ +R
Sbjct: 51 IGEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLR-EIQILLRFRHENVIGIR 107
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K+Q+ D F + +GL Y+H
Sbjct: 108 DILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQI--LRGLKYIH---S 162
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+L++ K+ DFGLA++ E H T TR Y APE + N
Sbjct: 163 ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 17/211 (8%)
Query: 500 LGQGGFGSVYQGVL--PDGTRLAV--KKLEGIGQG--KKEFRAEVSIIGSIHHLHLVKLR 553
+G+G FG V+QG+ P+ +AV K + +++F E + H H+VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G E ++ E G L F + +++ LD + A + LAYL +R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRS--FLQVRKYSLDLASLILYAYQLSTALAYLE---SKR 131
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYAI 671
+H DI NVL+ N K+ DFGL++ M E S + +G ++APE I
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 672 SEKSDVYSYGMVLLEII-GGRKNFDPNETSD 701
+ SDV+ +G+ + EI+ G K F + +D
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKK---LEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
K+G+G FG V++G+ ++ K LE ++ + E++++ ++ K G
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 93
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T + E++ GS + + LD I KGL YLH ++ I
Sbjct: 94 YLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---SEKKI 146
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H DIK NVLL ++ K++DFG+A +T Q T GT ++APE I A K+
Sbjct: 147 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPFWMAPEVIKQSAYDSKA 205
Query: 676 DVYSYGMVLLEIIGGR 691
D++S G+ +E+ G
Sbjct: 206 DIWSLGITAIELARGE 221
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTR---------LAVKKLEGIGQGKKEFRAEVSIIGSIH 545
+F LG G F V +L + R +A + LEG +G E E++++ I
Sbjct: 21 DFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEG-KEGSME--NEIAVLHKIK 74
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
H ++V L G H L + ++ G L I +K F + + + + Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDAS-RLIFQVLDAVKY 131
Query: 606 LHEDCDQRIIHCDIKPENVL---LDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
LH D I+H D+KPEN+L LD++ +SDFGL+K+ + V +T GT GY+A
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVA 186
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNF-DPNET 699
PE + S+ D +S G++ ++ G F D N+
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 15/196 (7%)
Query: 499 KLGQGGFGSVYQGVLP------DGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG G FG+V +G +K K E AE +++ + + ++V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
G C E +L E G L+K++ Q + + + + G+ YL E
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYL---QQNRHVKDKNIIELVHQVSMGMKYLEES--- 130
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYA 670
+H D+ NVLL ++AK+SDFGL+K + +++ G + APE I Y
Sbjct: 131 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYK 190
Query: 671 ISEKSDVYSYGMVLLE 686
S KSDV+S+G+++ E
Sbjct: 191 FSSKSDVWSFGVLMWE 206
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTR---------LAVKKLEGIGQGKKEFRAEVSIIGSIH 545
+F LG G F V +L + R +A + LEG +G E E++++ I
Sbjct: 21 DFRDVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEG-KEGSME--NEIAVLHKIK 74
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
H ++V L G H L + ++ G L I +K F + + + + Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDAS-RLIFQVLDAVKY 131
Query: 606 LHEDCDQRIIHCDIKPENVL---LDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
LH D I+H D+KPEN+L LD++ +SDFGL+K+ + V +T GT GY+A
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVA 186
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNF-DPNET 699
PE + S+ D +S G++ ++ G F D N+
Sbjct: 187 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 500 LGQGGFGSVY---QGVLPDGTRL----AVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
LGQG FG V+ + D +L +KK + + + E I+ ++H +VKL
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 553 R-GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
F EG L+ +F+ G L + K + + + +F +A A L +LH
Sbjct: 92 HYAFQTEGKLYLI-LDFLRGGDLFTRLSK--EVMFTEEDVKFYLA-ELALALDHLHSLG- 146
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
II+ D+KPEN+LLD+ H K++DFGL+K + ++ GT Y+APE +
Sbjct: 147 --IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGH 203
Query: 672 SEKSDVYSYGMVLLEIIGG 690
++ +D +S+G+++ E++ G
Sbjct: 204 TQSADWWSFGVLMFEMLTG 222
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 13/197 (6%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKK---LEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G+G FG V++G+ ++ K LE ++ + E++++ ++ K G
Sbjct: 30 RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGS 89
Query: 556 CAEGTHRLLAYEFMANGS-LDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+G+ + E++ GS LD EF + T L KGL YLH ++
Sbjct: 90 YLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI--ATMLKEIL---KGLDYLHS---EKK 141
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH DIK NVLL + K++DFG+A +T Q T GT ++APE I A K
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-NTFVGTPFWMAPEVIQQSAYDSK 200
Query: 675 SDVYSYGMVLLEIIGGR 691
+D++S G+ +E+ G
Sbjct: 201 ADIWSLGITAIELAKGE 217
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 537 EVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIA 596
E++++ I H ++V L TH L + ++ G L I ++ D
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFTT 653
L K YLHE+ I+H D+KPEN+L ++N ++DFGL+K+ EQ+ + +T
Sbjct: 116 LSAVK---YLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMST 166
Query: 654 LRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
GT GY+APE + S+ D +S G++ ++ G F
Sbjct: 167 ACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 28/298 (9%)
Query: 500 LGQGGFGSVYQGVLPDGTRL-AVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+G+G +G V + D R+ A+KK + KK E+ ++ + H +LV L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
C + L +EF+ + LD N LD++ G+ + H II
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQIINGIGFCHS---HNII 146
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT-NYAISEK 674
H DIKPEN+L+ + K+ DFG A+ + V+ TR Y APE + + +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLA-APGEVYDDEVATRWYRAPELLVGDVKYGKA 205
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDEQSDR 734
DV++ G ++ E+ G F + D+ + MM G L N +
Sbjct: 206 VDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHI-----MMCLGNLIPRHQELFN----KNP 256
Query: 735 VFTAVKVALWCVQEDMSLR-PSMTKVVQMLEGICPVPQP---PTCSPLGARLYSSFFR 788
VF V++ +E + R P +++VV L C P P C+ L L+ FF+
Sbjct: 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL---LHHDFFQ 311
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 121/277 (43%), Gaps = 34/277 (12%)
Query: 499 KLGQGGFGSVYQGVL-PDGTRLAVKKLEGI--GQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G+G FG V+ G L D T +AVK K +F E I+ H ++V+L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
C + + E + G D F + + L +T + A G+ YL C I
Sbjct: 181 CTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTR----GYLAPEWITNYA 670
H D+ N L+ + K+SDFG M+RE++ V G R + APE +
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFG----MSREEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSRLNIDE 730
S +SDV+S+G++L E + PN ++ + + +E+G RL E
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYPNLSNQQTR------EFVEKG-------GRLPCPE 338
Query: 731 Q-SDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
D VF ++ C + RPS + + Q L+ I
Sbjct: 339 LCPDAVFRLMEQ---CWAYEPGQRPSFSTIYQELQSI 372
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 11/201 (5%)
Query: 500 LGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+G G V V + + + ++ + + E+ I ++H ++VK G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
EG + L E+ + G L I D + F+ + G+ YLH I H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA---GVVYLH---GIGITH 127
Query: 617 CDIKPENVLLDDNYHAKVSDFGLAKLMT-REQSHVFTTLRGTRGYLAPEWITNYAI-SEK 674
DIKPEN+LLD+ + K+SDFGLA + + + + GT Y+APE + +E
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEP 187
Query: 675 SDVYSYGMVLLEIIGGRKNFD 695
DV+S G+VL ++ G +D
Sbjct: 188 VDVWSCGIVLTAMLAGELPWD 208
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 19/211 (9%)
Query: 500 LGQGGFGSVY---QGVLPDGTRL----AVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
LGQG FG V+ + D +L +KK + + + E I+ ++H +VKL
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 553 R-GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
F EG L+ +F+ G L + K + + + +F +A A L +LH
Sbjct: 93 HYAFQTEGKLYLI-LDFLRGGDLFTRLSK--EVMFTEEDVKFYLA-ELALALDHLHSLG- 147
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
II+ D+KPEN+LLD+ H K++DFGL+K + ++ GT Y+APE +
Sbjct: 148 --IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGH 204
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF---DPNET 699
++ +D +S+G+++ E++ G F D ET
Sbjct: 205 TQSADWWSFGVLMFEMLTGTLPFQGKDRKET 235
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 29/207 (14%)
Query: 500 LGQGGFGSVY------------QGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHL 547
LG G FG V+ VL + +K++E E ++ + H
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND-------ERLMLSIVTHP 66
Query: 548 HLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLH 607
++++ G + + +++ G L + +K+Q F + +F A L YLH
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFP-NPVAKF-YAAEVCLALEYLH 123
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
+ II+ D+KPEN+LLD N H K++DFG AK + V L GT Y+APE ++
Sbjct: 124 S---KDIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEVVS 176
Query: 668 NYAISEKSDVYSYGMVLLEIIGGRKNF 694
++ D +S+G+++ E++ G F
Sbjct: 177 TKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKK---LEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
K+G+G FG V++G+ ++ K LE ++ + E++++ ++ K G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T + E++ GS + + LD I KGL YLH ++ I
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---SEKKI 126
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H DIK NVLL ++ K++DFG+A +T Q T GT ++APE I A K+
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NTFVGTPFWMAPEVIKQSAYDSKA 185
Query: 676 DVYSYGMVLLEIIGGR 691
D++S G+ +E+ G
Sbjct: 186 DIWSLGITAIELARGE 201
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 500 LGQGGFGSVYQGVLP----DGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG+G FG VY+GV + +AVK K + K++F +E I+ ++ H H+VKL
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK-KNQEFLLDWETRFNIALGTAKGLAYLHE-DCD 611
G E ++ E G L ++ + KN +L T +L K +AYL +C
Sbjct: 92 GIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESINC- 146
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
+H DI N+L+ K+ DFGL++ + E + + R +++PE I
Sbjct: 147 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 203
Query: 672 SEKSDVYSYGMVLLEIIG-GRKNFDPNETSD 701
+ SDV+ + + + EI+ G++ F E D
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQPFFWLENKD 234
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 33/217 (15%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL------ 552
LGQG FG V + D A+KK+ + +EV ++ S++H ++V+
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 553 -RGFCAEGTH------RLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
R F T + E+ NG+L I +N D R + + L+Y
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR--LFRQILEALSY 131
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE-------------QSHVFT 652
+H Q IIH D+KP N+ +D++ + K+ DFGLAK + R S T
Sbjct: 132 IHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 653 TLRGTRGYLAPEWITNYA-ISEKSDVYSYGMVLLEII 688
+ GT Y+A E + +EK D+YS G++ E+I
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 500 LGQGGFGSVYQGVLP----DGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG+G FG VY+GV + +AVK K + K++F +E I+ ++ H H+VKL
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK-KNQEFLLDWETRFNIALGTAKGLAYLHE-DCD 611
G E ++ E G L ++ + KN +L T +L K +AYL +C
Sbjct: 76 GIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESINC- 130
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
+H DI N+L+ K+ DFGL++ + E + + R +++PE I
Sbjct: 131 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 187
Query: 672 SEKSDVYSYGMVLLEIIG-GRKNFDPNETSD 701
+ SDV+ + + + EI+ G++ F E D
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQPFFWLENKD 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 24/207 (11%)
Query: 500 LGQGGFGSVYQGVLP-DGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V G G ++AVK L+ +G+ K+E + + H H++
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQN----LKLFRHPHII 74
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + T + E+++ G L +I K + ++ F L Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD---YCHR-- 129
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN-- 668
++H D+KPENVLLD + +AK++DFGL+ +M+ G+ Y APE I+
Sbjct: 130 -HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS--DGEFLRDSCGSPNYAAPEVISGRL 186
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFD 695
YA E D++S G++L ++ G FD
Sbjct: 187 YAGPE-VDIWSCGVILYALLCGTLPFD 212
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 19/211 (9%)
Query: 500 LGQGGFGSVY---QGVLPDGTRL----AVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
LGQG FG V+ + D +L +KK + + + E I+ ++H +VKL
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 553 R-GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
F EG L+ +F+ G L + K + + + +F +A A L +LH
Sbjct: 92 HYAFQTEGKLYLI-LDFLRGGDLFTRLSK--EVMFTEEDVKFYLA-ELALALDHLHSLG- 146
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
II+ D+KPEN+LLD+ H K++DFGL+K + ++ GT Y+APE +
Sbjct: 147 --IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC-GTVEYMAPEVVNRRGH 203
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF---DPNET 699
++ +D +S+G+++ E++ G F D ET
Sbjct: 204 TQSADWWSFGVLMFEMLTGTLPFQGKDRKET 234
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 16/212 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+LG+G VY+ + K+ KK R E+ ++ + H +++KL+
Sbjct: 60 ELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFET 119
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
T L E + G L I +K D L + +AYLHE+ I+H D
Sbjct: 120 PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQIL---EAVAYLHENG---IVHRD 173
Query: 619 IKPENVLLDD---NYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
+KPEN+L + K++DFGL+K++ E + T+ GT GY APE + A +
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVCGTPGYCAPEILRGCAYGPEV 231
Query: 676 DVYSYGMVLLEIIGGRKNFDP--NETSDKAHF 705
D++S G++ ++ G F+P +E D+ F
Sbjct: 232 DMWSVGIITYILLCG---FEPFYDERGDQFMF 260
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVKKLE--GIGQGKKE-FRAEVSIIGSIHHLHLVKLRGF 555
+G G +G + DG L K+L+ + + +K+ +EV+++ + H ++V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 556 CAEGTHRLL--AYEFMANGSLDKWIFKK-------NQEFLLDWETRFNIALGTAKGLAYL 606
+ T+ L E+ G L I K ++EF+L T+ +AL +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC----HR 129
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
D ++H D+KP NV LD + K+ DFGLA+++ + S T GT Y++PE +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA-KTFVGTPYYMSPEQM 188
Query: 667 TNYAISEKSDVYSYGMVLLEI 687
+ +EKSD++S G +L E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 17/211 (8%)
Query: 500 LGQGGFGSVYQGVLP----DGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG+G FG VY+GV + +AVK K + K++F +E I+ ++ H H+VKL
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK-KNQEFLLDWETRFNIALGTAKGLAYLHE-DCD 611
G E ++ E G L ++ + KN +L T +L K +AYL +C
Sbjct: 80 GIIEEEPTWIIM-ELYPYGELGHYLERNKNSLKVL---TLVLYSLQICKAMAYLESINC- 134
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
+H DI N+L+ K+ DFGL++ + E + + R +++PE I
Sbjct: 135 ---VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRF 191
Query: 672 SEKSDVYSYGMVLLEIIG-GRKNFDPNETSD 701
+ SDV+ + + + EI+ G++ F E D
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQPFFWLENKD 222
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRL-----AVKKLEGIGQGKKEFRAEVSIIGSIHHLHL 549
+F V LG+GGFG V+ + +L KK +G + E I+ +H +
Sbjct: 189 DFRV-LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI 247
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETR--FNIALGTAKGLAYLH 607
V L T L M G + I+ +++ E R F A GL +LH
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLH 306
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
+ + II+ D+KPENVLLDD+ + ++SD GLA + Q+ GT G++APE +
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLL 362
Query: 668 NYAISEKSDVYSYGMVLLEIIGGRKNF 694
D ++ G+ L E+I R F
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
K Q G G Y RL+ + G ++E EV+I+ I H +++ L
Sbjct: 23 KCRQKGTGKEYAAKFIKKRRLSSSRR---GVSREEIEREVNILREIRHPNIITLHDIFEN 79
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
T +L E ++ G L ++ +K + D T+F + G+ YLH +RI H D
Sbjct: 80 KTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQI--LDGVHYLH---SKRIAHFD 133
Query: 619 IKPENVLLDD----NYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
+KPEN++L D N K+ DFG+A + E + F + GT ++APE + + +
Sbjct: 134 LKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIVNYEPLGLE 191
Query: 675 SDVYSYGMVLLEIIGGRKNF 694
+D++S G++ ++ G F
Sbjct: 192 ADMWSIGVITYILLSGASPF 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 15/200 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
K Q G G Y RL+ + G ++E EV+I+ I H +++ L
Sbjct: 30 KCRQKGTGKEYAAKFIKKRRLSSSRR---GVSREEIEREVNILREIRHPNIITLHDIFEN 86
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
T +L E ++ G L ++ +K + D T+F + G+ YLH +RI H D
Sbjct: 87 KTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQI--LDGVHYLH---SKRIAHFD 140
Query: 619 IKPENVLLDD----NYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
+KPEN++L D N K+ DFG+A + E + F + GT ++APE + + +
Sbjct: 141 LKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 675 SDVYSYGMVLLEIIGGRKNF 694
+D++S G++ ++ G F
Sbjct: 199 ADMWSIGVITYILLSGASPF 218
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 500 LGQGGFGSVYQGVL--PDGTRLAV--KKLEGIGQG--KKEFRAEVSIIGSIHHLHLVKLR 553
+G+G FG V+QG+ P+ +AV K + +++F E + H H+VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G E ++ E G L F + ++F LD + A + LAYL +R
Sbjct: 78 GVITENPVWIIM-ELCTLGELRS--FLQVRKFSLDLASLILYAYQLSTALAYLE---SKR 131
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYAI 671
+H DI NVL+ K+ DFGL++ M E S + +G ++APE I
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 672 SEKSDVYSYGMVLLEII-GGRKNFDPNETSD 701
+ SDV+ +G+ + EI+ G K F + +D
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRL-----AVKKLEGIGQGKKEFRAEVSIIGSIHHLHL 549
+F V LG+GGFG V+ + +L KK +G + E I+ +H +
Sbjct: 189 DFRV-LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI 247
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETR--FNIALGTAKGLAYLH 607
V L T L M G + I+ +++ E R F A GL +LH
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLH 306
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
+ + II+ D+KPENVLLDD+ + ++SD GLA + Q+ GT G++APE +
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLL 362
Query: 668 NYAISEKSDVYSYGMVLLEIIGGRKNF 694
D ++ G+ L E+I R F
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRL-----AVKKLEGIGQGKKEFRAEVSIIGSIHHLHL 549
+F V LG+GGFG V+ + +L KK +G + E I+ +H +
Sbjct: 189 DFRV-LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI 247
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETR--FNIALGTAKGLAYLH 607
V L T L M G + I+ +++ E R F A GL +LH
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLH 306
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
+ + II+ D+KPENVLLDD+ + ++SD GLA + Q+ GT G++APE +
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLL 362
Query: 668 NYAISEKSDVYSYGMVLLEIIGGRKNF 694
D ++ G+ L E+I R F
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 13/207 (6%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRL-----AVKKLEGIGQGKKEFRAEVSIIGSIHHLHL 549
+F V LG+GGFG V+ + +L KK +G + E I+ +H +
Sbjct: 189 DFRV-LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFI 247
Query: 550 VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETR--FNIALGTAKGLAYLH 607
V L T L M G + I+ +++ E R F A GL +LH
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIVSGLEHLH 306
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
+ + II+ D+KPENVLLDD+ + ++SD GLA + Q+ GT G++APE +
Sbjct: 307 Q---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGTPGFMAPELLL 362
Query: 668 NYAISEKSDVYSYGMVLLEIIGGRKNF 694
D ++ G+ L E+I R F
Sbjct: 363 GEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
K+G+G +G VY+ G A+KK+ E G R E+SI+ + H ++VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYD 67
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+L +E + + L K + E L+ T + L G+AY H D+R+
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCH---DRRV 121
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWIT-NYA 670
+H D+KP+N+L++ K++DFGLA+ + R+ +H TL Y AP+ + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL----WYRAPDVLMGSKK 177
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNF 694
S D++S G + E++ G F
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
K+G+G +G VY+ G A+KK+ E G R E+SI+ + H ++VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYD 67
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+L +E + + L K + E L+ T + L G+AY H D+R+
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCH---DRRV 121
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWIT-NYA 670
+H D+KP+N+L++ K++DFGLA+ + R+ +H TL Y AP+ + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL----WYRAPDVLMGSKK 177
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNF 694
S D++S G + E++ G F
Sbjct: 178 YSTTIDIWSVGCIFAEMVNGTPLF 201
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 100/200 (50%), Gaps = 19/200 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
K+G+G +G VY+ G A+KK+ E G R E+SI+ + H ++VKL
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYD 67
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+L +E + + L K + E L+ T + L G+AY H D+R+
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL--DVCEGGLESVTAKSFLLQLLNGIAYCH---DRRV 121
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWIT-NYA 670
+H D+KP+N+L++ K++DFGLA+ + R+ +H TL Y AP+ + +
Sbjct: 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTL----WYRAPDVLMGSKK 177
Query: 671 ISEKSDVYSYGMVLLEIIGG 690
S D++S G + E++ G
Sbjct: 178 YSTTIDIWSVGCIFAEMVNG 197
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 11/200 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQ--GKKEFRAEVSIIGSIHHLHLVKLRGFC 556
+LG G FG V++ V R+ V K K + E+SI+ +HH L+ L
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
+ +L EF++ G L I +++ + N +GL ++HE I+H
Sbjct: 118 EDKYEMVLILEFLSGGELFDRI--AAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVH 172
Query: 617 CDIKPENVLLDDNYHA--KVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
DIKPEN++ + + K+ DFGLA + ++ TT T + APE + +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT--ATAEFAAPEIVDREPVGFY 230
Query: 675 SDVYSYGMVLLEIIGGRKNF 694
+D+++ G++ ++ G F
Sbjct: 231 TDMWAIGVLGYVLLSGLSPF 250
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 106/235 (45%), Gaps = 22/235 (9%)
Query: 467 TSEEDNFLENLS-----GMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVL--PDGTRL 519
SE D++ E + MP Y ++Q +G+G FG V+QG+ P+ +
Sbjct: 361 VSETDDYAEIIDEEDTYTMPSTRDY-EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAM 419
Query: 520 AV--KKLEGIGQG--KKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLD 575
AV K + +++F E + H H+VKL G E ++ E G L
Sbjct: 420 AVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELR 478
Query: 576 KWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVS 635
F + ++F LD + A + LAYL +R +H DI NVL+ K+
Sbjct: 479 S--FLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLG 533
Query: 636 DFGLAKLMTREQSHVFTTLRGTR--GYLAPEWITNYAISEKSDVYSYGMVLLEII 688
DFGL++ M E S + +G ++APE I + SDV+ +G+ + EI+
Sbjct: 534 DFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 586
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 499 KLGQGGFGSVYQGVL--PDG--TRLAVKKLE----GIGQGKKEFRAEVSIIGSIHHLHLV 550
KLG G FG V +G P G +AVK L+ + +F EV+ + S+ H +L+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
+L G +++ E GSL + K FLL +R+ A+ A+G+ YL
Sbjct: 79 RLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES-- 133
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTR-GYLAPEWITN 668
+R IH D+ N+LL K+ DFGL + + + H V R + APE +
Sbjct: 134 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 669 YAISEKSDVYSYGMVLLEI 687
S SD + +G+ L E+
Sbjct: 193 RTFSHASDTWMFGVTLWEM 211
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 15/200 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
K Q G G Y RL + G ++E EV+I+ I H +++ L
Sbjct: 44 KCRQKGTGKEYAAKFIKKRRLXSSRR---GVSREEIEREVNILREIRHPNIITLHDIFEN 100
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
T +L E ++ G L ++ +K + D T+F + G+ YLH +RI H D
Sbjct: 101 KTDVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQI--LDGVHYLH---SKRIAHFD 154
Query: 619 IKPENVLLDD----NYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
+KPEN++L D N K+ DFG+A + E + F + GT ++APE + + +
Sbjct: 155 LKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIVNYEPLGLE 212
Query: 675 SDVYSYGMVLLEIIGGRKNF 694
+D++S G++ ++ G F
Sbjct: 213 ADMWSIGVITYILLSGASPF 232
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 564 LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPEN 623
L M G L I+ Q + F A GL LH + RI++ D+KPEN
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YAAEICCGLEDLHRE---RIVYRDLKPEN 316
Query: 624 VLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMV 683
+LLDD+ H ++SD GLA + Q+ GT GY+APE + N + D ++ G +
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCL 374
Query: 684 LLEIIGGRKNF 694
L E+I G+ F
Sbjct: 375 LYEMIAGQSPF 385
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKK---LEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
K+G+G FG V++G+ ++ K LE ++ + E++++ ++ K G
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 88
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T + E++ GS + + LD I KGL YLH ++ I
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---SEKKI 141
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H DIK NVLL ++ K++DFG+A +T Q GT ++APE I A K+
Sbjct: 142 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NXFVGTPFWMAPEVIKQSAYDSKA 200
Query: 676 DVYSYGMVLLEIIGGR 691
D++S G+ +E+ G
Sbjct: 201 DIWSLGITAIELARGE 216
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 564 LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPEN 623
L M G L I+ Q + F A GL LH + RI++ D+KPEN
Sbjct: 261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YAAEICCGLEDLHRE---RIVYRDLKPEN 316
Query: 624 VLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMV 683
+LLDD+ H ++SD GLA + Q+ GT GY+APE + N + D ++ G +
Sbjct: 317 ILLDDHGHIRISDLGLAVHVPEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCL 374
Query: 684 LLEIIGGRKNF 694
L E+I G+ F
Sbjct: 375 LYEMIAGQSPF 385
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKK---LEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
K+G+G FG V++G+ ++ K LE ++ + E++++ ++ K G
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGS 73
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T + E++ GS + + LD I KGL YLH ++ I
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLH---SEKKI 126
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H DIK NVLL ++ K++DFG+A +T Q GT ++APE I A K+
Sbjct: 127 HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR-NXFVGTPFWMAPEVIKQSAYDSKA 185
Query: 676 DVYSYGMVLLEIIGGR 691
D++S G+ +E+ G
Sbjct: 186 DIWSLGITAIELARGE 201
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYL 661
GL ++H ++ +++ D+KP N+LLD++ H ++SD GLA ++++ H GT GY+
Sbjct: 304 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 662 APEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEE----- 715
APE + A +D +S G +L +++ G F ++T DK M E
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417
Query: 716 -GKLRNILDSRLNID 729
+LR++L+ L D
Sbjct: 418 SPELRSLLEGLLQRD 432
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYL 661
GL ++H ++ +++ D+KP N+LLD++ H ++SD GLA ++++ H GT GY+
Sbjct: 304 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 662 APEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEE----- 715
APE + A +D +S G +L +++ G F ++T DK M E
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417
Query: 716 -GKLRNILDSRLNID 729
+LR++L+ L D
Sbjct: 418 SPELRSLLEGLLQRD 432
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 33/219 (15%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVK 551
LG+G FG V + T +AVK L+ ++ +E +++ ++H H++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ---------------------EFLLDWE 590
L G C++ LL E+ GSL ++ + + E L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ A ++G+ YL E +++H D+ N+L+ + K+SDFGL++ + E S+V
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 651 FTTL-RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEII 688
+ R ++A E + ++ + +SDV+S+G++L EI+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 110/230 (47%), Gaps = 27/230 (11%)
Query: 481 PVRFTYRDL---QTATNNF-----SVKLGQGGFGSVYQ-GVLPDGTRLAVKKLEGIG-QG 530
P F +R + Q A N+F + LG G FG V++ G +LA K ++ G +
Sbjct: 70 PAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKD 129
Query: 531 KKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
K+E + E+S++ + H +L++L +L E++ G L I ++
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNL----- 184
Query: 591 TRFNIAL---GTAKGLAYLHEDCDQRIIHCDIKPENVLL--DDNYHAKVSDFGLAKLMT- 644
T + L +G+ ++H+ I+H D+KPEN+L D K+ DFGLA+
Sbjct: 185 TELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKP 241
Query: 645 REQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
RE+ V GT +LAPE + +S +D++S G++ ++ G F
Sbjct: 242 REKLKVNF---GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 499 KLGQGGFGSVYQGVL--PDG--TRLAVKKLE----GIGQGKKEFRAEVSIIGSIHHLHLV 550
KLG G FG V +G P G +AVK L+ + +F EV+ + S+ H +L+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
+L G +++ E GSL + K FLL +R+ A+ A+G+ YL
Sbjct: 85 RLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES-- 139
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTR-GYLAPEWITN 668
+R IH D+ N+LL K+ DFGL + + + H V R + APE +
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 669 YAISEKSDVYSYGMVLLEI 687
S SD + +G+ L E+
Sbjct: 199 RTFSHASDTWMFGVTLWEM 217
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYL 661
GL ++H ++ +++ D+KP N+LLD++ H ++SD GLA ++++ H GT GY+
Sbjct: 303 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 356
Query: 662 APEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEE----- 715
APE + A +D +S G +L +++ G F ++T DK M E
Sbjct: 357 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 416
Query: 716 -GKLRNILDSRLNID 729
+LR++L+ L D
Sbjct: 417 SPELRSLLEGLLQRD 431
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYL 661
GL ++H ++ +++ D+KP N+LLD++ H ++SD GLA ++++ H GT GY+
Sbjct: 304 GLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYM 357
Query: 662 APEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEE----- 715
APE + A +D +S G +L +++ G F ++T DK M E
Sbjct: 358 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417
Query: 716 -GKLRNILDSRLNID 729
+LR++L+ L D
Sbjct: 418 SPELRSLLEGLLQRD 432
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 499 KLGQGGFGSVYQGVL--PDG--TRLAVKKLE----GIGQGKKEFRAEVSIIGSIHHLHLV 550
KLG G FG V +G P G +AVK L+ + +F EV+ + S+ H +L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
+L G +++ E GSL + K FLL +R+ A+ A+G+ YL
Sbjct: 75 RLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES-- 129
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTR-GYLAPEWITN 668
+R IH D+ N+LL K+ DFGL + + + H V R + APE +
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 669 YAISEKSDVYSYGMVLLEI 687
S SD + +G+ L E+
Sbjct: 189 RTFSHASDTWMFGVTLWEM 207
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVKKLE--GIGQGKKE-FRAEVSIIGSIHHLHLVKLRGF 555
+G G +G + DG L K+L+ + + +K+ +EV+++ + H ++V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 556 CAEGTHRLL--AYEFMANGSLDKWIFKK-------NQEFLLDWETRFNIALGTAKGLAYL 606
+ T+ L E+ G L I K ++EF+L T+ +AL +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC----HR 129
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
D ++H D+KP NV LD + K+ DFGLA+++ + S GT Y++PE +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA-KAFVGTPYYMSPEQM 188
Query: 667 TNYAISEKSDVYSYGMVLLEI 687
+ +EKSD++S G +L E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 499 KLGQGGFGSVYQGVL--PDG--TRLAVKKLE----GIGQGKKEFRAEVSIIGSIHHLHLV 550
KLG G FG V +G P G +AVK L+ + +F EV+ + S+ H +L+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
+L G +++ E GSL + K FLL +R+ A+ A+G+ YL
Sbjct: 85 RLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES-- 139
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTR-GYLAPEWITN 668
+R IH D+ N+LL K+ DFGL + + + H V R + APE +
Sbjct: 140 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 669 YAISEKSDVYSYGMVLLEI 687
S SD + +G+ L E+
Sbjct: 199 RTFSHASDTWMFGVTLWEM 217
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 18/204 (8%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSI-HHLHLVKLRG-FC 556
+G G +G VY+G + G A+K ++ G ++E + E++++ HH ++ G F
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 557 AEGTHRL-----LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
+ + L EF GS+ I K + L E I +GL++LH+
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLI-KNTKGNTLKEEWIAYICREILRGLSHLHQ--- 147
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT---- 667
++IH DIK +NVLL +N K+ DFG++ + R T GT ++APE I
Sbjct: 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVIACDEN 206
Query: 668 -NYAISEKSDVYSYGMVLLEIIGG 690
+ KSD++S G+ +E+ G
Sbjct: 207 PDATYDFKSDLWSLGITAIEMAEG 230
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 499 KLGQGGFGSVYQGVL--PDG--TRLAVKKLE----GIGQGKKEFRAEVSIIGSIHHLHLV 550
KLG G FG V +G P G +AVK L+ + +F EV+ + S+ H +L+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
+L G +++ E GSL + K FLL +R+ A+ A+G+ YL
Sbjct: 79 RLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES-- 133
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTR-GYLAPEWITN 668
+R IH D+ N+LL K+ DFGL + + + H V R + APE +
Sbjct: 134 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 669 YAISEKSDVYSYGMVLLEI 687
S SD + +G+ L E+
Sbjct: 193 RTFSHASDTWMFGVTLWEM 211
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 15/197 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHHLHLVKLRGFC 556
+LG G FG VY+ + + LA K+ ++ ++ E+ I+ S H ++VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALG-TAKGLAYLHEDCDQRII 615
+ + EF A G++D + + + E++ + T L YLH D +II
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLH---DNKII 157
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT-----NYA 670
H D+K N+L + K++DFG++ TR + GT ++APE + +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQR-RDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 671 ISEKSDVYSYGMVLLEI 687
K+DV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 19/199 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHHLHLVKLRGFC 556
+LG G FG VY+ + + LA K+ ++ ++ E+ I+ S H ++VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALG-TAKGLAYLHEDCDQRII 615
+ + EF A G++D + + + E++ + T L YLH D +II
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLH---DNKII 157
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTR--EQSHVFTTLRGTRGYLAPEWIT-----N 668
H D+K N+L + K++DFG++ TR ++ F GT ++APE + +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI---GTPYWMAPEVVMCETSKD 214
Query: 669 YAISEKSDVYSYGMVLLEI 687
K+DV+S G+ L+E+
Sbjct: 215 RPYDYKADVWSLGITLIEM 233
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 499 KLGQGGFGSVYQGVL--PDG--TRLAVKKLE----GIGQGKKEFRAEVSIIGSIHHLHLV 550
KLG G FG V +G P G +AVK L+ + +F EV+ + S+ H +L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
+L G +++ E GSL + K FLL +R+ A+ A+G+ YL
Sbjct: 75 RLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES-- 129
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTR-GYLAPEWITN 668
+R IH D+ N+LL K+ DFGL + + + H V R + APE +
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 669 YAISEKSDVYSYGMVLLEI 687
S SD + +G+ L E+
Sbjct: 189 RTFSHASDTWMFGVTLWEM 207
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 15/197 (7%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKK--EFRAEVSIIGSIHHLHLVKLRGFC 556
+LG G FG VY+ + + LA K+ ++ ++ E+ I+ S H ++VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALG-TAKGLAYLHEDCDQRII 615
+ + EF A G++D + + + E++ + T L YLH D +II
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLH---DNKII 157
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT-----NYA 670
H D+K N+L + K++DFG++ TR + GT ++APE + +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR-RDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 671 ISEKSDVYSYGMVLLEI 687
K+DV+S G+ L+E+
Sbjct: 217 YDYKADVWSLGITLIEM 233
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKE-FRAEVSIIGSIHHLHLVKLRGFC 556
+LG G FG V++ G A K + + KE R E+ + + H LV L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
+ ++ YEFM+ G L + + ++ + D + KGL ++HE+ +H
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--MRQVCKGLCHMHEN---NYVH 278
Query: 617 CDIKPENVLLDDNY--HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
D+KPEN++ K+ DFGL + +QS TT GT + APE +
Sbjct: 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYY 336
Query: 675 SDVYSYGMVLLEIIGGRKNF 694
+D++S G++ ++ G F
Sbjct: 337 TDMWSVGVLSYILLSGLSPF 356
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 499 KLGQGGFGSVYQGVL--PDG--TRLAVKKLE----GIGQGKKEFRAEVSIIGSIHHLHLV 550
KLG G FG V +G P G +AVK L+ + +F EV+ + S+ H +L+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
+L G +++ E GSL + K FLL +R+ A+ A+G+ YL
Sbjct: 75 RLYGVVLTPPMKMVT-ELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLES-- 129
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH-VFTTLRGTR-GYLAPEWITN 668
+R IH D+ N+LL K+ DFGL + + + H V R + APE +
Sbjct: 130 -KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 669 YAISEKSDVYSYGMVLLEI 687
S SD + +G+ L E+
Sbjct: 189 RTFSHASDTWMFGVTLWEM 207
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 18/201 (8%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVKKLE--GIGQGKKE-FRAEVSIIGSIHHLHLVKLRGF 555
+G G +G + DG L K+L+ + + +K+ +EV+++ + H ++V+
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 556 CAEGTHRLL--AYEFMANGSLDKWIFKK-------NQEFLLDWETRFNIALGTAKGLAYL 606
+ T+ L E+ G L I K ++EF+L T+ +AL +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKEC----HR 129
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
D ++H D+KP NV LD + K+ DFGLA+++ ++ GT Y++PE +
Sbjct: 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA-KEFVGTPYYMSPEQM 188
Query: 667 TNYAISEKSDVYSYGMVLLEI 687
+ +EKSD++S G +L E+
Sbjct: 189 NRMSYNEKSDIWSLGCLLYEL 209
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKE-FRAEVSIIGSIHHLHLVKLRGFC 556
+LG G FG V++ G A K + + KE R E+ + + H LV L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
+ ++ YEFM+ G L + + ++ + D + KGL ++HE+ +H
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEY--MRQVCKGLCHMHEN---NYVH 172
Query: 617 CDIKPENVLLDDNY--HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
D+KPEN++ K+ DFGL + +QS TT GT + APE +
Sbjct: 173 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAAPEVAEGKPVGYY 230
Query: 675 SDVYSYGMVLLEIIGGRKNF 694
+D++S G++ ++ G F
Sbjct: 231 TDMWSVGVLSYILLSGLSPF 250
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 33/219 (15%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVK 551
LG+G FG V + T +AVK L+ ++ +E +++ ++H H++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ---------------------EFLLDWE 590
L G C++ LL E+ GSL ++ + + E L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ A ++G+ YL E +++H D+ N+L+ + K+SDFGL++ + E S V
Sbjct: 151 DLISFAWQISQGMQYLAE---MKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 651 FTTL-RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEII 688
+ R ++A E + ++ + +SDV+S+G++L EI+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 97/217 (44%), Gaps = 33/217 (15%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL------ 552
LGQG FG V + D A+KK+ + +EV ++ S++H ++V+
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 553 -RGFCAEGTH------RLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
R F T + E+ N +L I +N D R + + L+Y
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR--LFRQILEALSY 131
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE-------------QSHVFT 652
+H Q IIH D+KP N+ +D++ + K+ DFGLAK + R S T
Sbjct: 132 IHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 653 TLRGTRGYLAPEWITNYA-ISEKSDVYSYGMVLLEII 688
+ GT Y+A E + +EK D+YS G++ E+I
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 38/222 (17%)
Query: 500 LGQGGFGSVYQ----GVLPDG----TRLAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D T++AVK L+ K + +E+ ++ I H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK-------------NQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + N E L + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR 655
A A+G+ YL ++ IH D+ NVL+ ++ K++DFGLA R+ H+ +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RDIHHIDXXKK 208
Query: 656 GTRG-----YLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
T G ++APE + + + +SDV+S+G++L EI +GG
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V + R+A+KK+ E ++ R E+ I+ + H +++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENIIGIN 89
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 144
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 145 ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 17/210 (8%)
Query: 487 RDLQTATNNFSVKLGQ-GGFGSVYQGVLPDGTRLAVKKLEGIGQGKK--EFRAEVSIIGS 543
RDL +F +G+ G FG VY+ + + LA K+ ++ ++ E+ I+ S
Sbjct: 6 RDLNP--EDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILAS 63
Query: 544 IHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALG-TAKG 602
H ++VKL + + EF A G++D + + + E++ + T
Sbjct: 64 CDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDA 120
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
L YLH D +IIH D+K N+L + K++DFG++ TR + GT ++A
Sbjct: 121 LNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMA 177
Query: 663 PEWIT-----NYAISEKSDVYSYGMVLLEI 687
PE + + K+DV+S G+ L+E+
Sbjct: 178 PEVVMCETSKDRPYDYKADVWSLGITLIEM 207
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V + R+A+KK+ E ++ R E+ I+ + H +++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLAFRHENIIGIN 89
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 144
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 13/196 (6%)
Query: 499 KLGQGGFGSVYQGV---LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G+G FG VY+G+ + + + LE ++ + E++++ ++ + G
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGS 85
Query: 556 CAEGTHRLLAYEFMANGS-LDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+ T + E++ GS LD + K L+ I KGL YLH +R
Sbjct: 86 YLKSTKLWIIMEYLGGGSALD--LLKPGP---LEETYIATILREILKGLDYLH---SERK 137
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
IH DIK NVLL + K++DFG+A +T Q GT ++APE I A K
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR-NXFVGTPFWMAPEVIKQSAYDFK 196
Query: 675 SDVYSYGMVLLEIIGG 690
+D++S G+ +E+ G
Sbjct: 197 ADIWSLGITAIELAKG 212
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 21/215 (9%)
Query: 495 NFSVKLGQGGFGSVYQGVLPD----GTRLAVKKLEGIGQGKKE--FRAEVSIIGSIHHLH 548
F LG G F V VL + G AVK + KE E++++ I H +
Sbjct: 25 EFKETLGTGAFSEV---VLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHEN 81
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
+V L H L + ++ G L I +K D T L + YLH
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD---AVYYLHR 138
Query: 609 DCDQRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEW 665
I+H D+KPEN+L D+ +SDFGL+K+ + V +T GT GY+APE
Sbjct: 139 ---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK--GDVMSTACGTPGYVAPEV 193
Query: 666 ITNYAISEKSDVYSYGMVLLEIIGGRKNF-DPNET 699
+ S+ D +S G++ ++ G F D N++
Sbjct: 194 LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDS 228
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 87
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 142
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 16/205 (7%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVK--KLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
KLG G + +VY+G+ G +A+K KL+ E+S++ + H ++V+L
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV 71
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKN-----QEFLLDWETRFNIALGTAKGLAYLHEDC 610
L +EFM N L K++ + + L+ F L +GLA+ HE+
Sbjct: 72 IHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQL--LQGLAFCHEN- 127
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT-NY 669
+I+H D+KP+N+L++ K+ DFGLA+ + F++ T Y AP+ + +
Sbjct: 128 --KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP-VNTFSSEVVTLWYRAPDVLMGSR 184
Query: 670 AISEKSDVYSYGMVLLEIIGGRKNF 694
S D++S G +L E+I G+ F
Sbjct: 185 TYSTSIDIWSCGCILAEMITGKPLF 209
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G ++E EVSI+ + H +++ L T +L E ++ G L ++ +K L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---L 112
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E + G+ YLH ++I H D+KPEN+ LLD N H K+ DFGLA +
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
E F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 170 --EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G ++E EVSI+ + H +++ L T +L E ++ G L ++ +K L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---L 112
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E + G+ YLH ++I H D+KPEN+ LLD N H K+ DFGLA +
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
E F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 170 --EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G ++E EVSI+ + H +++ L T +L E ++ G L ++ +K L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---L 112
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E + G+ YLH ++I H D+KPEN+ LLD N H K+ DFGLA +
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
E F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 170 --EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 487 RDLQTATNNFSVKLGQGGFGSVYQGVL------PDGTRLAVKKLEGIGQG--KKEFRAEV 538
+++ + F +LG+ FG VY+G L +A+K L+ +G ++EFR E
Sbjct: 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 80
Query: 539 SIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ-------------EF 585
+ + H ++V L G + + + + ++G L +++ ++ +
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 586 LLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR 645
L+ ++ A G+ YL ++H D+ NVL+ D + K+SD GL + +
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 646 EQSHVF--TTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
+ +L R ++APE I S SD++SYG+VL E+
Sbjct: 198 ADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEV 240
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 487 RDLQTATNNFSVKLGQGGFGSVYQGVL------PDGTRLAVKKLEGIGQG--KKEFRAEV 538
+++ + F +LG+ FG VY+G L +A+K L+ +G ++EFR E
Sbjct: 4 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEA 63
Query: 539 SIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ-------------EF 585
+ + H ++V L G + + + + ++G L +++ ++ +
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 586 LLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR 645
L+ ++ A G+ YL ++H D+ NVL+ D + K+SD GL + +
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 646 EQSHVF--TTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
+ +L R ++APE I S SD++SYG+VL E+
Sbjct: 181 ADYYKLLGNSLLPIR-WMAPEAIMYGKFSIDSDIWSYGVVLWEV 223
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 87
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 142
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 87
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 142
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 143 ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 89
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 90 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 144
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 145 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 204
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 205 KGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 87
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 142
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 527 IGQGKKEFRAEVSIIGSI-HHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEF 585
I + K++ E+ I+ H +++ L+ +G H L E M G L I + Q+F
Sbjct: 60 IDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR--QKF 117
Query: 586 LLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYH----AKVSDFGLAK 641
+ E F + K + YLH Q ++H D+KP N+L D ++ DFG AK
Sbjct: 118 FSEREASF-VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Query: 642 LMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF--DPNET 699
+ R ++ + T T ++APE + E D++S G++L ++ G F P++T
Sbjct: 174 QL-RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDT 232
Query: 700 SDK 702
++
Sbjct: 233 PEE 235
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 30/234 (12%)
Query: 480 MPVRFTYRDLQTATNNFSVK--LGQGGFGSVYQGVL-PDGTRLAVKKLEGIGQGKKEFRA 536
MP R Y +++F +K LG+G +G V P G +A+KK+E + R
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 537 --EVSIIGSIHHLHLVKL----RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
E+ I+ H +++ + R E + + + + L + I + + L D
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDH 113
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE---- 646
++ I T + + LH +IH D+KP N+L++ N KV DFGLA+++
Sbjct: 114 IQYFI-YQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 647 -----QSHVFTTLRGTRGYLAPE-WITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
Q T TR Y APE +T+ S DV+S G +L E+ R F
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 30/234 (12%)
Query: 480 MPVRFTYRDLQTATNNFSVK--LGQGGFGSVYQGVL-PDGTRLAVKKLEGIGQGKKEFRA 536
MP R Y +++F +K LG+G +G V P G +A+KK+E + R
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 537 --EVSIIGSIHHLHLVKL----RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
E+ I+ H +++ + R E + + + + L + I + + L D
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDH 113
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE---- 646
++ I T + + LH +IH D+KP N+L++ N KV DFGLA+++
Sbjct: 114 IQYFI-YQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 647 -----QSHVFTTLRGTRGYLAPE-WITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
Q T TR Y APE +T+ S DV+S G +L E+ R F
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 39 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 95
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 96 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 150
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 151 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 210
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 211 KGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 87
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 88 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 142
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 143 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 202
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 203 KGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G ++E EVSI+ + H +++ L T +L E ++ G L ++ +K L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---L 112
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E + G+ YLH ++I H D+KPEN+ LLD N H K+ DFGLA +
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
E F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 170 --EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGIGQGK--KEFRAEVSIIGSIHHLHLVK 551
LG+G FG V + T +AVK L+ ++ +E +++ ++H H++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQ---------------------EFLLDWE 590
L G C++ LL E+ GSL ++ + + E L
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ A ++G+ YL E ++H D+ N+L+ + K+SDFGL++ + E S V
Sbjct: 151 DLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 651 FTTL-RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEII 688
+ R ++A E + ++ + +SDV+S+G++L EI+
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV 246
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 88/183 (48%), Gaps = 14/183 (7%)
Query: 527 IGQGKKEFRAEVSIIGSI-HHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEF 585
I + K++ E+ I+ H +++ L+ +G H L E M G L I + Q+F
Sbjct: 60 IDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILR--QKF 117
Query: 586 LLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYH----AKVSDFGLAK 641
+ E F + K + YLH Q ++H D+KP N+L D ++ DFG AK
Sbjct: 118 FSEREASF-VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Query: 642 LMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF--DPNET 699
+ R ++ + T T ++APE + E D++S G++L ++ G F P++T
Sbjct: 174 QL-RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDT 232
Query: 700 SDK 702
++
Sbjct: 233 PEE 235
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G ++E EVSI+ + H +++ L T +L E ++ G L ++ +K L
Sbjct: 56 GVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---L 112
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E + G+ YLH ++I H D+KPEN+ LLD N H K+ DFGLA +
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
E F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 170 --EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 107
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 108 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 162
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 163 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 500 LGQGGFGSVYQGVLPDG-----------TRLAVKKLEGIGQGKK--EFRAEVSIIGSI-H 545
LG+G FG V VL + T++AVK L+ K + +E+ ++ I
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK-------------NQEFLLDWETR 592
H +++ L G C + + E+ + G+L +++ + N E L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
+ A A+G+ YL ++ IH D+ NVL+ ++ K++DFGLA R+ H+
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RDIHHIDY 205
Query: 653 TLRGTRG-----YLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
+ T G ++APE + + + +SDV+S+G++L EI +GG
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKLEGIGQGKKEFRA--EVSIIGSIHHLHLVKLRG 554
+G+G +G S Y + + R+A+KK+ R E+ I+ H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGIND 92
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 93 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS---A 147
Query: 613 RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNYA 670
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 148 NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 671 ISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 38/222 (17%)
Query: 500 LGQGGFGSVYQ----GVLPDG----TRLAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D T++AVK L+ K + +E+ ++ I H +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK-------------NQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + N E L + +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR 655
A A+G+ YL ++ IH D+ NVL+ ++ K++DFGLA R+ H+ +
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RDIHHIDYYKK 197
Query: 656 GTRG-----YLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
T G ++APE + + + +SDV+S+G++L EI +GG
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 239
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 500 LGQGGFGSVYQGVLPDG-----------TRLAVKKLEGIGQGKK--EFRAEVSIIGSI-H 545
LG+G FG V VL + T++AVK L+ K + +E+ ++ I
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK-------------NQEFLLDWETR 592
H +++ L G C + + E+ + G+L +++ + N E L +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
+ A A+G+ YL ++ IH D+ NVL+ ++ K++DFGLA R+ H+
Sbjct: 194 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RDIHHIDY 246
Query: 653 TLRGTRG-----YLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
+ T G ++APE + + + +SDV+S+G++L EI +GG
Sbjct: 247 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 291
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 38/222 (17%)
Query: 500 LGQGGFGSVYQ----GVLPDG----TRLAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D T++AVK L+ K + +E+ ++ I H +
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK-------------NQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + N E L + +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR 655
A A+G+ YL ++ IH D+ NVL+ ++ K++DFGLA R+ H+ +
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RDIHHIDYYKK 193
Query: 656 GTRG-----YLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
T G ++APE + + + +SDV+S+G++L EI +GG
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 235
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 500 LGQGGFGSVYQGVLP--DGTRLAVK----KLEGIGQGK-KEFRAEVSIIGSIHHLHLVKL 552
LG+G FGSV +G L DGT L V KL+ Q + +EF +E + + H ++++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 553 RGFCAEGTHR-----LLAYEFMANGSLDKWIFKKNQEF---LLDWETRFNIALGTAKGLA 604
G C E + + ++ FM G L ++ E + +T + A G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 605 YLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLA-KLMTREQSHVFTTLRGTRGYLAP 663
YL ++ +H D+ N +L D+ V+DFGL+ K+ + + + ++A
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 664 EWITNYAISEKSDVYSYGMVLLEI 687
E + + + KSDV+++G+ + EI
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEI 242
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 38/222 (17%)
Query: 500 LGQGGFGSVYQ----GVLPDG----TRLAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D T++AVK L+ K + +E+ ++ I H +
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK-------------NQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + N E L + +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR 655
A A+G+ YL ++ IH D+ NVL+ ++ K++DFGLA R+ H+ +
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RDIHHIDYYKK 200
Query: 656 GTRG-----YLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
T G ++APE + + + +SDV+S+G++L EI +GG
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 242
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 36/214 (16%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGK-------------------KEFRAEVSI 540
LG+GG+G V+Q V+K+ G GK +AE +I
Sbjct: 25 LGKGGYGKVFQ----------VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 541 IGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA 600
+ + H +V L G L E+++ G L + +E + +T +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEIS 131
Query: 601 KGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGY 660
L +LH+ + II+ D+KPEN++L+ H K++DFGL K + + V T GT Y
Sbjct: 132 MALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEY 187
Query: 661 LAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+APE + + D +S G ++ +++ G F
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 500 LGQGGFGSVYQGVLPDG-----------TRLAVKKLEGIGQGKK--EFRAEVSIIGSI-H 545
LG+G FG V VL + T++AVK L+ K + +E+ ++ I
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK-------------NQEFLLDWETR 592
H +++ L G C + + E+ + G+L +++ + N E L +
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
+ A A+G+ YL ++ IH D+ NVL+ ++ K++DFGLA R+ H+
Sbjct: 146 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RDIHHIDY 198
Query: 653 TLRGTRG-----YLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
+ T G ++APE + + + +SDV+S+G++L EI +GG
Sbjct: 199 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 243
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 108/222 (48%), Gaps = 38/222 (17%)
Query: 500 LGQGGFGSVYQ----GVLPDG----TRLAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D T++AVK L+ K + +E+ ++ I H +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK-------------NQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + N E L + +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR 655
A A+G+ YL ++ IH D+ NVL+ ++ K++DFGLA R+ H+ +
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RDIHHIDYYKK 208
Query: 656 GTRG-----YLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
T G ++APE + + + +SDV+S+G++L EI +GG
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 108/225 (48%), Gaps = 44/225 (19%)
Query: 500 LGQGGFGSVYQGVLPDG-----------TRLAVKKLEGIGQGKK--EFRAEVSIIGSI-H 545
LG+G FG V VL + T++AVK L+ K + +E+ ++ I
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK-------------NQEFLLDWETR 592
H +++ L G C + + E+ + G+L +++ + N E L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
+ A A+G+ YL ++ IH D+ NVL+ ++ K++DFGLA R+ H+
Sbjct: 153 VSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLA----RDIHHIDY 205
Query: 653 TLRGTRG-----YLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
+ T G ++APE + + + +SDV+S+G++L EI +GG
Sbjct: 206 YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGG 250
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 21/210 (10%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-FCAE 558
+G G FG V+Q L + +A+KK + Q K+ E+ I+ + H ++V L+ F +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKK---VLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSN 104
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALG-----TAKGLAYLHEDCDQR 613
G + + + + + +++ ++ + +T + + + LAY+H
Sbjct: 105 GDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG--- 161
Query: 614 IIHCDIKPENVLLDDNYHA-KVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---TNY 669
I H DIKP+N+LLD K+ DFG AK++ + +V + +R Y APE I TNY
Sbjct: 162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV--SXICSRYYRAPELIFGATNY 219
Query: 670 AISEKSDVYSYGMVLLEIIGGRKNFDPNET 699
+ D++S G V+ E++ G+ F P E+
Sbjct: 220 --TTNIDIWSTGCVMAELMQGQPLF-PGES 246
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G ++E EVSI+ + H +++ L T +L E ++ G L ++ +K L
Sbjct: 56 GVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---L 112
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E + G+ YLH ++I H D+KPEN+ LLD N H K+ DFGLA +
Sbjct: 113 SEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI 169
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
E F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 170 --EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y + + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 91
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 146
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 147 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 30/234 (12%)
Query: 480 MPVRFTYRDLQTATNNFSVK--LGQGGFGSVYQGVL-PDGTRLAVKKLEGIGQGKKEFRA 536
MP R Y +++F +K LG+G +G V P G +A+KK+E + R
Sbjct: 1 MPKRIVY----NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 537 --EVSIIGSIHHLHLVKL----RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
E+ I+ H +++ + R E + + + + L + I + + L D
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDH 113
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE---- 646
++ I T + + LH +IH D+KP N+L++ N KV DFGLA+++
Sbjct: 114 IQYFI-YQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADN 169
Query: 647 -----QSHVFTTLRGTRGYLAPE-WITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
Q TR Y APE +T+ S DV+S G +L E+ R F
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 33/217 (15%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL------ 552
LGQG FG V + D A+KK+ + +EV ++ S++H ++V+
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 553 -RGFCAEGTH------RLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
R F T + E+ N +L I +N D R + + L+Y
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR--LFRQILEALSY 131
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE-------------QSHVFT 652
+H Q IIH ++KP N+ +D++ + K+ DFGLAK + R S T
Sbjct: 132 IH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLT 188
Query: 653 TLRGTRGYLAPEWITNYA-ISEKSDVYSYGMVLLEII 688
+ GT Y+A E + +EK D YS G++ E I
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y + + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 29 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 85
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 140
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 37/235 (15%)
Query: 482 VRFTYRDLQTATNNFSVKLGQGGFGSVYQGVL-PDGTRLAVKKLEGIGQ----GKKEFRA 536
VR YRDLQ +G G +G+V V G ++A+KKL Q K+ +R
Sbjct: 23 VRAVYRDLQP--------VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR- 73
Query: 537 EVSIIGSIHHLHLVKLRGFCA------EGTHRLLAYEFMAN--GSLDKWIFKKNQEFLLD 588
E+ ++ + H +++ L + T L FM G L K E L +
Sbjct: 74 ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK------HEKLGE 127
Query: 589 WETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQS 648
+F + KGL Y+H IIH D+KP N+ ++++ K+ DFGLA+ E
Sbjct: 128 DRIQF-LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMX 183
Query: 649 HVFTTLRGTRGYLAPEWITNYA-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
TR Y APE I N+ ++ D++S G ++ E+I G+ F ++ D+
Sbjct: 184 GXVV----TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ 234
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y + + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 36 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 92
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 147
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 207
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y + + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 37 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 93
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 94 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 148
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 149 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 208
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 209 KGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y + + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 28 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 84
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 85 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 139
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 140 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 199
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 200 KGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y + + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 91
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 146
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y V + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 107
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ + ++K K Q D F +GL Y+H
Sbjct: 108 DIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 162
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 163 ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 148
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 202
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y + + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 29 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 85
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 86 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 140
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 141 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 200
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 201 KGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 9/177 (5%)
Query: 545 HHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLA 604
+H LV L C + RL NG D + Q L + RF A + L
Sbjct: 111 NHPFLVGLHS-CFQTESRLFFVIEYVNGG-DLMFHMQRQRKLPEEHARFYSA-EISLALN 167
Query: 605 YLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
YLHE + II+ D+K +NVLLD H K++D+G+ K R +T GT Y+APE
Sbjct: 168 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSTFCGTPNYIAPE 223
Query: 665 WITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSD--KAHFPSYAFKMMEEGKLR 719
+ D ++ G+++ E++ GR FD +SD + Y F+++ E ++R
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 280
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 150
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA R + T TR Y APE + N+
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMTGYVATRWYRAPEIMLNW 204
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KXQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 150
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA R + T TR Y APE + N+
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMTGYVATRWYRAPEIMLNW 204
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 150
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA R + T TR Y APE + N+
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTADEMTGYVATRWYRAPEIMLNW 204
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 148
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 202
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 154
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA R T TR Y APE + N+
Sbjct: 155 --ADIIHRDLKPSNLAVNEDXELKILDFGLA----RHTDDEMTGYVATRWYRAPEIMLNW 208
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 18/249 (7%)
Query: 458 RKAPESPQETSEEDNFLENLSGMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGV-LPDG 516
++A E PQ +S L++ + + + +++ ++LG+G +G V + +P G
Sbjct: 17 KEAFEQPQTSSTPPRDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSG 76
Query: 517 TRLAVKKLEGI--GQGKKEFRAEVSI-IGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGS 573
+AVK++ Q +K ++ I + ++ V G + E M + S
Sbjct: 77 QIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM-DTS 135
Query: 574 LDKW---IFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNY 630
LDK+ + K Q D + IA+ K L +LH +IH D+KP NVL++
Sbjct: 136 LDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALG 191
Query: 631 HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI----TNYAISEKSDVYSYGMVLLE 686
K+ DFG++ + S T G + Y+APE I S KSD++S G+ ++E
Sbjct: 192 QVKMCDFGISGYLV--DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE 249
Query: 687 IIGGRKNFD 695
+ R +D
Sbjct: 250 LAILRFPYD 258
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 466 ETSEEDNFLENLSGMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLPD---GTRLAVK 522
ET + + L PV + YR+ + +LG+G FG V++ + D G + AVK
Sbjct: 47 ETEDNEGVLLTEKLKPVDYEYRE-EVHWMTHQPRLGRGSFGEVHR--MKDKQTGFQCAVK 103
Query: 523 KLEGIGQGKKEFRAE-VSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK 581
K+ + FR E + + +V L G EG + E + GSL + I
Sbjct: 104 KVR-----LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--- 155
Query: 582 NQEFLLDWETRFNIALGTA-KGLAYLHEDCDQRIIHCDIKPENVLL-DDNYHAKVSDFGL 639
Q L E R LG A +GL YLH +RI+H D+K +NVLL D A + DFG
Sbjct: 156 KQMGCLP-EDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGH 211
Query: 640 AKLMTRE--QSHVFTT--LRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
A + + + T + GT ++APE + K D++S ++L ++ G
Sbjct: 212 ALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 40/216 (18%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGK-------------------KEFRAEVSI 540
LG+GG+G V+Q V+K+ G GK +AE +I
Sbjct: 25 LGKGGYGKVFQ----------VRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNI 74
Query: 541 IGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA 600
+ + H +V L G L E+++ G L + +E + +T +
Sbjct: 75 LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACFYLAEIS 131
Query: 601 KGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE--QSHVFTTLRGTR 658
L +LH+ + II+ D+KPEN++L+ H K++DFGL K + +H F GT
Sbjct: 132 MALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC---GTI 185
Query: 659 GYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
Y+APE + + D +S G ++ +++ G F
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 86
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 141
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA R T TR Y APE + N+
Sbjct: 142 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRWYRAPEIMLNW 195
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 229
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 493 TNNFSVK--LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRA---EVSIIGSIHH 546
++N+ VK LG+G F V + V G A K + ++F+ E I + H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 547 LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++V+L E + L ++ + G L + I + EF + + I + +AY
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ-QILESIAYC 144
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTTLRGTRGYLAP 663
H + I+H ++KPEN+LL K++DFGLA + S + GT GYL+P
Sbjct: 145 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 199
Query: 664 EWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
E + S+ D+++ G++L ++ G F
Sbjct: 200 EVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 12/166 (7%)
Query: 526 GIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKW-----IFK 580
I +F+ E+ II I + + + G + YE+M N S+ K+ +
Sbjct: 82 SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLD 141
Query: 581 KNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLA 640
KN + + I +Y+H + + I H D+KP N+L+D N K+SDFG +
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGES 199
Query: 641 KLMTREQSHVFTTLRGTRGYLAPEWITNYAISE--KSDVYSYGMVL 684
+ M ++ RGT ++ PE+ +N + K D++S G+ L
Sbjct: 200 EYMVDKK---IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 139
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 193
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA R T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGXVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 145
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 146 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 199
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA R T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 155
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 209
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 149
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 150 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 203
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 148
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 202
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y + + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 91
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYF--LYQILRGLKYIHS--- 146
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 155
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 209
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 140
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA R T TR Y APE + N+
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRWYRAPEIMLNW 194
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 228
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 100
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 155
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 209
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRTLF 235
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y + + R+A++K+ E ++ R E+ I+ H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIRKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 91
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 146
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H T TR Y APE + N
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 206
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 145
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 199
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 95
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 150
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 204
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRTLF 230
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 91/213 (42%), Gaps = 13/213 (6%)
Query: 495 NFSVKLGQGGFGSVYQGVL-PDGTRLAVKKLEGIGQGKKEFRAEVS-----IIGSIHHLH 548
+F +G+G FG V + AVK L+ KK+ + ++ ++ H
Sbjct: 41 HFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LV L +++ G L + + + L+ RF A A L YLH
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGEL--FYHLQRERCFLEPRARF-YAAEIASALGYLH- 156
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
I++ D+KPEN+LLD H ++DFGL K E + +T GT YLAPE +
Sbjct: 157 --SLNIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLHK 213
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSD 701
D + G VL E++ G F T++
Sbjct: 214 QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 93
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 148
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 202
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRTLF 228
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 145
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 199
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 87
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 142
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 143 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 196
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGRTLF 222
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 85
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 140
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA R T TR Y APE + N+
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLA----RHTDDEMTGYVATRWYRAPEIMLNW 194
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRTLF 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 149
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 203
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 110/230 (47%), Gaps = 22/230 (9%)
Query: 496 FSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGK-----KEFRAEVSIIGSIHHLHLV 550
F KLG G FG V+ ++ + + + ++ I + + ++ AE+ ++ S+ H +++
Sbjct: 26 FKRKLGSGAFGDVH--LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 551 KLRGFCAEGTHRLLAYEFMANGSL-DKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
K+ + + + E G L ++ + + + L + LAY H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH-- 141
Query: 610 CDQRIIHCDIKPENVLLDDNY-HA--KVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
Q ++H D+KPEN+L D H+ K+ DFGLA+L ++ T GT Y+APE +
Sbjct: 142 -SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS--TNAAGTALYMAPE-V 197
Query: 667 TNYAISEKSDVYSYGMVLLEIIGGRKNF---DPNETSDKAHF--PSYAFK 711
++ K D++S G+V+ ++ G F E KA + P+YA +
Sbjct: 198 FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE 247
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 90
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 145
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 199
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRTLF 225
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 99
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 154
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 155 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 208
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRTLF 234
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 163
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 217
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 139
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 193
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 493 TNNFSVK--LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRA---EVSIIGSIHH 546
++N+ VK LG+G F V + V G A K + ++F+ E I + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 547 LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++V+L E + L ++ + G L + I + EF + + I + +AY
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ-QILESIAYC 121
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTTLRGTRGYLAP 663
H + I+H ++KPEN+LL K++DFGLA + S + GT GYL+P
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 176
Query: 664 EWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
E + S+ D+++ G++L ++ G F
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 98
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 153
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 154 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 207
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGRTLF 233
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 493 TNNFSVK--LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRA---EVSIIGSIHH 546
++N+ VK LG+G F V + V G A K + ++F+ E I + H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 547 LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++V+L E + L ++ + G L + I + EF + + I + +AY
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ-QILESIAYC 121
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTTLRGTRGYLAP 663
H + I+H ++KPEN+LL K++DFGLA + S + GT GYL+P
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 176
Query: 664 EWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
E + S+ D+++ G++L ++ G F
Sbjct: 177 EVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 21/225 (9%)
Query: 492 ATNNFS--VKLGQGGFGSVYQGVLP-DGTRLAVKKL------EGIGQGKKEFRAEVSIIG 542
AT+ + ++G G +G+VY+ P G +A+K + EG+ A + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 543 SIHHLHLVKLRGFCAEG-THR----LLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIAL 597
+ H ++V+L CA T R L +E + + L ++ K L ET ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGL-PAETIKDLMR 119
Query: 598 GTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT 657
+GL +LH +C I+H D+KPEN+L+ K++DFGLA++ + + + + T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LAPVVVT 174
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
Y APE + + D++S G + E+ + F N +D+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV + G ++AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 117
Query: 555 FCAEGT-----HRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
T + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIH-- 171
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 172 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 226
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
+ D++S G ++ E++ GR F
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGRTLF 252
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 17/211 (8%)
Query: 493 TNNFSVK--LGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRA---EVSIIGSIHH 546
++N+ VK LG+G F V + V G A K + ++F+ E I + H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 547 LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
++V+L E + L ++ + G L + I + EF + + I + +AY
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQ-QILESIAYC 120
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTTLRGTRGYLAP 663
H + I+H ++KPEN+LL K++DFGLA + S + GT GYL+P
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSP 175
Query: 664 EWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
E + S+ D+++ G++L ++ G F
Sbjct: 176 EVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 162
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 216
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 250
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 27/203 (13%)
Query: 500 LGQGGFGSVYQGVLPDGTRL-AVKKLE-------GIGQGKKEFRAEVSIIGSIHHLHLVK 551
LG+G F +VY+ + ++ A+KK++ G + R E+ ++ + H +++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EIKLLQELSHPNIIG 76
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
L ++ L ++FM D + K+ +L L T +GL YLH+
Sbjct: 77 LLDAFGHKSNISLVFDFMET---DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ--- 130
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLM---TREQSHVFTTLRGTRGYLAPEWI-- 666
I+H D+KP N+LLD+N K++DFGLAK R H TR Y APE +
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV----TRWYRAPELLFG 186
Query: 667 -TNYAISEKSDVYSYGMVLLEII 688
Y + D+++ G +L E++
Sbjct: 187 ARMYGVG--VDMWAVGCILAELL 207
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT--LRGTRGYLAPEWITNYAI 671
IIH D+KP N+L+ KV DFG+A+ + + V T + GT YL+PE ++
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF 694
+SDVYS G VL E++ G F
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 38/222 (17%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + E + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR 655
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA R+ +++ +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA----RDINNIDXXKK 215
Query: 656 GTRG-----YLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
T G ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 110
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 111 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 168 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 166
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 220
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 254
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 149
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 203
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 107
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 162
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 216
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 250
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K+Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KSQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGL + E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 99/205 (48%), Gaps = 24/205 (11%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGT 560
+G FG V++ L + +AVK + + EV + + H ++++ G GT
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 561 ----HRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC------ 610
L F GSL ++ K N ++ W +IA A+GLAYLHED
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL-KAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 611 -DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR-GTRGYLAPEWITN 668
I H DIK +NVLL +N A ++DFGLA +S T + GTR Y+APE +
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLE 206
Query: 669 YAIS------EKSDVYSYGMVLLEI 687
AI+ + D+Y+ G+VL E+
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 54 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 110
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 111 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 167
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 168 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 163
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 217
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 38/222 (17%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + E + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR 655
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA R+ +++ +
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLA----RDINNIDXXKK 215
Query: 656 GTRG-----YLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
T G ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + E + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL- 654
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA+ + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
R ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 466 ETSEEDNFLENLSGMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLPD---GTRLAVK 522
ET + + L PV + YR+ + ++G+G FG V++ + D G + AVK
Sbjct: 33 ETEDNEGVLLTEKLKPVDYEYRE-EVHWMTHQPRVGRGSFGEVHR--MKDKQTGFQCAVK 89
Query: 523 KLEGIGQGKKEFRAE-VSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK 581
K+ + FR E + + +V L G EG + E + GSL + I
Sbjct: 90 KVR-----LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--- 141
Query: 582 NQEFLLDWETRFNIALGTA-KGLAYLHEDCDQRIIHCDIKPENVLL-DDNYHAKVSDFGL 639
Q L E R LG A +GL YLH +RI+H D+K +NVLL D A + DFG
Sbjct: 142 KQMGCLP-EDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGH 197
Query: 640 AKLMTRE--QSHVFTT--LRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
A + + + T + GT ++APE + K D++S ++L ++ G
Sbjct: 198 ALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + E + ++ +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL- 654
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA+ + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
R ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 109/225 (48%), Gaps = 21/225 (9%)
Query: 492 ATNNFS--VKLGQGGFGSVYQGVLP-DGTRLAVKKL------EGIGQGKKEFRAEVSIIG 542
AT+ + ++G G +G+VY+ P G +A+K + EG+ A + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 543 SIHHLHLVKLRGFCAEG-THR----LLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIAL 597
+ H ++V+L CA T R L +E + + L ++ K L ET ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGL-PAETIKDLMR 119
Query: 598 GTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT 657
+GL +LH +C I+H D+KPEN+L+ K++DFGLA++ + + + +F + T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA-LFPVV-VT 174
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
Y APE + + D++S G + E+ + F N +D+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 219
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 21/225 (9%)
Query: 492 ATNNFS--VKLGQGGFGSVYQGVLP-DGTRLAVKKL------EGIGQGKKEFRAEVSIIG 542
AT+ + ++G G +G+VY+ P G +A+K + EG+ A + +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 543 SIHHLHLVKLRGFCAEG-THR----LLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIAL 597
+ H ++V+L CA T R L +E + + L ++ K L ET ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGL-PAETIKDLMR 119
Query: 598 GTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT 657
+GL +LH +C I+H D+KPEN+L+ K++DFGLA++ + + + + T
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDPVVVT 174
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
Y APE + + D++S G + E+ + F N +D+
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 219
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 94
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 149
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 203
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRTLF 229
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 37/219 (16%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQ--GKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG+GGFG V++ D A+K++ + +++ EV + + H +V+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQ----EFLLDW-------ETR-----FNIALGTA 600
E E + S +++ + Q E L DW E R +I L A
Sbjct: 73 LEKN----TTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 601 KGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR--EQSHVFTTLR--- 655
+ + +LH + ++H D+KP N+ + KV DFGL M + E+ V T +
Sbjct: 129 EAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 185
Query: 656 ------GTRGYLAPEWITNYAISEKSDVYSYGMVLLEII 688
GT+ Y++PE I + S K D++S G++L E++
Sbjct: 186 RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + E + ++ +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL- 654
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA+ + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
R ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKL--EGIGQGKKEFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L + + + +E+ ++ I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + E + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL- 654
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA+ + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
R ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 71
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ S+D KK +D I L K GLA+
Sbjct: 72 DVIHTENKLYLVFEFL---SMD---LKK----FMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KPEN+L++ K++DFGLA+ + R H TL Y A
Sbjct: 122 CH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 174
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 108/235 (45%), Gaps = 25/235 (10%)
Query: 466 ETSEEDNFLENLSGMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLPD---GTRLAVK 522
ET + + L PV + YR+ + ++G+G FG V++ + D G + AVK
Sbjct: 49 ETEDNEGVLLTEKLKPVDYEYRE-EVHWMTHQPRVGRGSFGEVHR--MKDKQTGFQCAVK 105
Query: 523 KLEGIGQGKKEFRAE-VSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKK 581
K+ + FR E + + +V L G EG + E + GSL + I
Sbjct: 106 KVR-----LEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI--- 157
Query: 582 NQEFLLDWETRFNIALGTA-KGLAYLHEDCDQRIIHCDIKPENVLL-DDNYHAKVSDFGL 639
Q L E R LG A +GL YLH +RI+H D+K +NVLL D A + DFG
Sbjct: 158 KQMGCLP-EDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGH 213
Query: 640 AKLMTRE--QSHVFTT--LRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
A + + + T + GT ++APE + K D++S ++L ++ G
Sbjct: 214 ALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y + + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 35 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 91
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 92 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 146
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H TR Y APE + N
Sbjct: 147 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 206
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 207 KGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 500 LGQGGFG---SVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
+G+G +G S Y + + R+A+KK+ E ++ R E+ I+ H +++ +
Sbjct: 36 IGEGAYGMVCSAYDNL--NKVRVAIKKISPFEHQTYCQRTLR-EIKILLRFRHENIIGIN 92
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFK--KNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
T + ++ ++ ++K K Q D F +GL Y+H
Sbjct: 93 DIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF--LYQILRGLKYIHS--- 147
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV--FTTLRGTRGYLAPEWITNY 669
++H D+KP N+LL+ K+ DFGLA++ + H TR Y APE + N
Sbjct: 148 ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNS 207
Query: 670 AISEKS-DVYSYGMVLLEIIGGRKNF 694
KS D++S G +L E++ R F
Sbjct: 208 KGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 24/228 (10%)
Query: 492 ATNNFS--VKLGQGGFGSVYQGVLP-DGTRLAVKKLEGIGQGKKEFRAEVSIIGSI---- 544
AT+ + ++G G +G+VY+ P G +A+K + G +S + +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 545 -----HHLHLVKLRGFCAEG-THR----LLAYEFMANGSLDKWIFKKNQEFLLDWETRFN 594
H ++V+L CA T R L +E + + L ++ K L ET +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGL-PAETIKD 124
Query: 595 IALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL 654
+ +GL +LH +C I+H D+KPEN+L+ K++DFGLA++ + + + T +
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTPV 179
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
T Y APE + + D++S G + E+ + F N +D+
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQ 227
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 139
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E + TR Y APE + N+
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA----GFVATRWYRAPEIMLNW 193
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT--LRGTRGYLAPEWITNYAI 671
IIH D+KP N+++ KV DFG+A+ + + V T + GT YL+PE ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF 694
+SDVYS G VL E++ G F
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT--LRGTRGYLAPEWITNYAI 671
IIH D+KP N+++ KV DFG+A+ + + V T + GT YL+PE ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF 694
+SDVYS G VL E++ G F
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E + TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA----GFVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT--LRGTRGYLAPEWITNYAI 671
IIH D+KP N+++ KV DFG+A+ + + V T + GT YL+PE ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF 694
+SDVYS G VL E++ G F
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + E + ++ +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL- 654
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA+ + + TT
Sbjct: 209 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
R ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 303
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 69
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ S+D KK +D I L K GLA+
Sbjct: 70 DVIHTENKLYLVFEFL---SMD---LKK----FMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KPEN+L++ K++DFGLA+ + R H TL Y A
Sbjct: 120 CH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 172
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN- 668
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNA 197
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ D+GLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT--LRGTRGYLAPEWITNYAI 671
IIH D+KP N+++ KV DFG+A+ + + V T + GT YL+PE ++
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 196
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF 694
+SDVYS G VL E++ G F
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E + TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMA----GFVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLE------GIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+G+G F V + + + G + AVK ++ G ++ + E SI + H H+V+L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKK-NQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
+ + +EFM L I K+ + F+ + + L Y H D
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 148
Query: 612 QRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
IIH D+KPENVLL +++ K+ DFG+A + E V GT ++APE +
Sbjct: 149 NNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRVGTPHFMAPEVVKR 207
Query: 669 YAISEKSDVYSYGMVLLEIIGG 690
+ DV+ G++L ++ G
Sbjct: 208 EPYGKPVDVWGCGVILFILLSG 229
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + E + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL- 654
A+G+ YL Q+ IH D+ NVL+ +N +++DFGLA+ + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
R ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 84
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ I K + L D +F I +GL Y+H
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGADLNN-IVKCAK--LTDDHVQFLI-YQILRGLKYIHS- 139
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E T TR Y APE + N+
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 193
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 545 HHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLA 604
+H LV L C + RL NG D + Q L + RF A + L
Sbjct: 79 NHPFLVGLHS-CFQTESRLFFVIEYVNGG-DLMFHMQRQRKLPEEHARFYSA-EISLALN 135
Query: 605 YLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
YLHE + II+ D+K +NVLLD H K++D+G+ K R + GT Y+APE
Sbjct: 136 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSXFCGTPNYIAPE 191
Query: 665 WITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSD--KAHFPSYAFKMMEEGKLR 719
+ D ++ G+++ E++ GR FD +SD + Y F+++ E ++R
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 248
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + E + ++ +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL- 654
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA+ + + TT
Sbjct: 155 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
R ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 249
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 528 GQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLL 587
G +++ EVSI+ I H +++ L T +L E +A G L ++ +K L
Sbjct: 55 GVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES---L 111
Query: 588 DWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENV-LLDDNY---HAKVSDFGLAKLM 643
E G+ YLH +I H D+KPEN+ LLD N K+ DFGLA +
Sbjct: 112 TEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168
Query: 644 TREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + F + GT ++APE + + ++D++S G++ ++ G F
Sbjct: 169 --DFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 111
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 166
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E TR Y APE + N+
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYV----ATRWYRAPEIMLNW 220
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRTLF 246
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 20/209 (9%)
Query: 500 LGQGGFGSVYQGVLPD-----GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
LG+G F + V ++ K++E Q KE A G H ++VKL
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQ--KEITALKLCEG---HPNIVKLHE 73
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+ H L E + G L + I KK + E + I ++++H D +
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASY-IMRKLVSAVSHMH---DVGV 127
Query: 615 IHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
+H D+KPEN+L +DN K+ DFG A+L + + T T Y APE +
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQNGY 186
Query: 672 SEKSDVYSYGMVLLEIIGGRKNFDPNETS 700
E D++S G++L ++ G+ F ++ S
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQSHDRS 215
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ D +D I L K GLA+
Sbjct: 69 DVIHTENKLYLVFEFLHQDLKD----------FMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KPEN+L++ K++DFGLA+ + R H TL Y A
Sbjct: 119 CH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 171
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 545 HHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLA 604
+H LV L C + RL NG D + Q L + RF A + L
Sbjct: 68 NHPFLVGLHS-CFQTESRLFFVIEYVNGG-DLMFHMQRQRKLPEEHARFYSA-EISLALN 124
Query: 605 YLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
YLHE + II+ D+K +NVLLD H K++D+G+ K R + GT Y+APE
Sbjct: 125 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSXFCGTPNYIAPE 180
Query: 665 WITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSD--KAHFPSYAFKMMEEGKLR 719
+ D ++ G+++ E++ GR FD +SD + Y F+++ E ++R
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 237
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + E + ++ +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL- 654
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA+ + + TT
Sbjct: 150 TYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
R ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 244
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 30/218 (13%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + E+ + G+L +++ + E + ++ +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL- 654
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA+ + + TT
Sbjct: 152 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
R ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 246
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 47/83 (56%), Gaps = 2/83 (2%)
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT--LRGTRGYLAPEWITNYAI 671
IIH D+KP N+++ KV DFG+A+ + + V T + GT YL+PE ++
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSV 213
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF 694
+SDVYS G VL E++ G F
Sbjct: 214 DARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 9/177 (5%)
Query: 545 HHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLA 604
+H LV L C + RL NG D + Q L + RF A + L
Sbjct: 64 NHPFLVGLHS-CFQTESRLFFVIEYVNGG-DLMFHMQRQRKLPEEHARFYSA-EISLALN 120
Query: 605 YLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
YLHE + II+ D+K +NVLLD H K++D+G+ K R + GT Y+APE
Sbjct: 121 YLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSXFCGTPNYIAPE 176
Query: 665 WITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSD--KAHFPSYAFKMMEEGKLR 719
+ D ++ G+++ E++ GR FD +SD + Y F+++ E ++R
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR 233
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 37/219 (16%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEF----------RAEVSIIGSI 544
NF + LG+G FG V +L D R ++L I KK+ E ++ +
Sbjct: 22 NFLMVLGKGSFGKV---MLAD--RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALL 76
Query: 545 HHLHLVKLRGFCAEGTHRL-LAYEFMANGSLDKWI-----FKKNQEFLLDWETRFNIALG 598
+ C + RL E++ G L I FK+ Q A
Sbjct: 77 DKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFY--------AAE 128
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK--LMTREQSHVFTTLRG 656
+ GL +LH+ + II+ D+K +NV+LD H K++DFG+ K +M + F G
Sbjct: 129 ISIGLFFLHK---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC---G 182
Query: 657 TRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
T Y+APE I + D ++YG++L E++ G+ FD
Sbjct: 183 TPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 19/199 (9%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKE-FRAEVSIIGSIHHLHLVKLRGFC 556
+LG G FG VY+ + G A K +E + + E + E+ I+ + H ++VKL G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIAL-GTAKGLAYLHEDCDQRII 615
+ EF G++D + + ++ E + + + L +LH +RII
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLH---SKRII 131
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLA--KLMTREQSHVFTTLRGTRGYLAPEWITNYAISE 673
H D+K NVL+ +++DFG++ L T ++ F GT ++APE + + +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPEVVMCETMKD 188
Query: 674 -----KSDVYSYGMVLLEI 687
K+D++S G+ L+E+
Sbjct: 189 TPYDYKADIWSLGITLIEM 207
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 70
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KPEN+L++ K++DFGLA+ + R H TL Y A
Sbjct: 121 CH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 173
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 75
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 126 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 178
Query: 663 PEWITNYA-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 179 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 74 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 130
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 131 TPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHS---AGII 186
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 676 DVYSYGMVLLEII------GGRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 301
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 26/213 (12%)
Query: 500 LGQGGFGSVYQGVL-PDGTRLAVKKLEGIGQGK------KEFRA----EVSIIGSIH-HL 547
LG+G V + + P AVK ++ G G +E R EV I+ + H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 548 HLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLH 607
++++L+ T L ++ M G L ++ +K L + ETR I + + LH
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETR-KIMRALLEVICALH 141
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI- 666
+ I+H D+KPEN+LLDD+ + K++DFG + + + ++ GT YLAPE I
Sbjct: 142 K---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLRSVCGTPSYLAPEIIE 196
Query: 667 -----TNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ ++ D++S G+++ ++ G F
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 18/209 (8%)
Query: 498 VKLGQGGFGSVYQGV-LPDGTRLAVKKLEGI--GQGKKEFRAEVSI-IGSIHHLHLVKLR 553
++LG+G +G V + +P G +AVK++ Q +K ++ I + ++ V
Sbjct: 13 MELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFY 72
Query: 554 GFCAEGTHRLLAYEFMANGSLDKW---IFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
G + E M + SLDK+ + K Q D + IA+ K L +LH
Sbjct: 73 GALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEHLHSKL 129
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI---- 666
+IH D+KP NVL++ K+ DFG++ + + + G + Y+APE I
Sbjct: 130 S--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA--GCKPYMAPERINPEL 185
Query: 667 TNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
S KSD++S G+ ++E+ R +D
Sbjct: 186 NQKGYSVKSDIWSLGITMIELAILRFPYD 214
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 69
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KPEN+L++ K++DFGLA+ + R H TL Y A
Sbjct: 120 CH---SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 172
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 97/199 (48%), Gaps = 19/199 (9%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKE-FRAEVSIIGSIHHLHLVKLRGFC 556
+LG G FG VY+ + G A K +E + + E + E+ I+ + H ++VKL G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA-KGLAYLHEDCDQRII 615
+ EF G++D + + ++ E + + + L +LH +RII
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLT---EPQIQVVCRQMLEALNFLH---SKRII 139
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLA--KLMTREQSHVFTTLRGTRGYLAPEWITNYAISE 673
H D+K NVL+ +++DFG++ L T ++ F GT ++APE + + +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI---GTPYWMAPEVVMCETMKD 196
Query: 674 -----KSDVYSYGMVLLEI 687
K+D++S G+ L+E+
Sbjct: 197 TPYDYKADIWSLGITLIEM 215
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 108
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 163
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DFGLA+ E TR Y APE + N+
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXV----ATRWYRAPEIMLNW 217
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 171
Query: 663 PEWITNYA-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 172 PEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVF 92
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---II 148
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 676 DVYSYGMVLLEIIG------GRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 70
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF++ D +D I L K GLA+
Sbjct: 71 DVIHTENKLYLVFEFLSMDLKD----------FMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 121 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 173
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 92
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---II 148
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 676 DVYSYGMVLLEIIG------GRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 98/221 (44%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 71
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF++ D +D I L K GLA+
Sbjct: 72 DVIHTENKLYLVFEFLSMDLKD----------FMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 122 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 174
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 85
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 86 TPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYLLYQMLXGIKHLHSAG---II 141
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 142 HRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 199
Query: 676 DVYSYGMVLLEIIG------GRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 200 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGK------KEFRA----EVSIIGSIH-HL 547
LG+G V + + P AVK ++ G G +E R EV I+ + H
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 548 HLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLH 607
++++L+ T L ++ M G L ++ +K L + ETR I + + LH
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETR-KIMRALLEVICALH 128
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI- 666
+ I+H D+KPEN+LLDD+ + K++DFG + + + + GT YLAPE I
Sbjct: 129 K---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTPSYLAPEIIE 183
Query: 667 -----TNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ ++ D++S G+++ ++ G F
Sbjct: 184 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 36/218 (16%)
Query: 500 LGQGGFGSVYQGV--LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH------LVK 551
LG+G FG V Q V G R+A+K ++ + + K+ R E++++ I+ V+
Sbjct: 41 LGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQ 100
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
+ + H +++E + + D K N ++A + + +LH D
Sbjct: 101 MFDWFDYHGHMCISFELLGLSTFD--FLKDNNYLPYPIHQVRHMAFQLCQAVKFLH---D 155
Query: 612 QRIIHCDIKPENVL-LDDNYH------------------AKVSDFGLAKLMTREQSHVFT 652
++ H D+KPEN+L ++ +Y +V DFG A T + H +
Sbjct: 156 NKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA---TFDHEH-HS 211
Query: 653 TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
T+ TR Y APE I S+ DV+S G ++ E G
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 171
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 75
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 76 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 126 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 178
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 179 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 219
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 67
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 170
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 31/235 (13%)
Query: 472 NFLENLSGMPVRFTYRDLQTATNNFSVK------LGQGGFGSVYQGVLPD---GTRLAVK 522
+ +++L P F +Q +T FS + LG+G FG V + D G AVK
Sbjct: 4 SMMDHLHATPGMF----VQHSTAIFSDRYKGQRVLGKGSFGEVI--LCKDKITGQECAVK 57
Query: 523 KL--EGIGQ--GKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWI 578
+ + Q K+ EV ++ + H +++KL F + + L E G L I
Sbjct: 58 VISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 117
Query: 579 FKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLD---DNYHAKVS 635
+ + +D I G+ Y+H++ +I+H D+KPEN+LL+ + + ++
Sbjct: 118 ISRKRFSEVDAA---RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRII 171
Query: 636 DFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
DFGL+ E S GT Y+APE + + EK DV+S G++L ++ G
Sbjct: 172 DFGLSTHF--EASKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 67
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 170
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 69
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 120 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 172
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 499 KLGQGGFGSVYQGV-LPDGTR-LAVKKL------EGIGQGKKEFRAEVSIIGSIHHLHLV 550
++G+G +G V++ L +G R +A+K++ EG+ A + + + H ++V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 551 KLRGFCA-----EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
+L C T L +E + + L ++ K E + ET ++ +GL +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEW 665
LH R++H D+KP+N+L+ + K++DFGLA++ + + + T++ T Y APE
Sbjct: 136 LHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 666 ITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + + D++S G + E+ + F
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 171
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 72
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 73 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 123 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 175
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + + VL G +AVKKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 34 AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVF 90
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + LD E + G+ +LH II
Sbjct: 91 TPQKTLEEFQDVYLVMELMDANLCQVIH-MELDHERMSYLLYQMLCGIKHLH---SAGII 146
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T + + T TR Y APE I E
Sbjct: 147 HRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYYRAPEVILGMGYKENV 204
Query: 676 DVYSYGMVLLEIIGGRKNFDP-------NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ G F N+ ++ PS F + +RN +++R
Sbjct: 205 DIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 261
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 101/213 (47%), Gaps = 26/213 (12%)
Query: 500 LGQGGFGSVYQGVL-PDGTRLAVKKLEGIGQGK------KEFRA----EVSIIGSIH-HL 547
LG+G V + + P AVK ++ G G +E R EV I+ + H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 548 HLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLH 607
++++L+ T L ++ M G L ++ +K L + ETR I + + LH
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETR-KIMRALLEVICALH 141
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI- 666
+ I+H D+KPEN+LLDD+ + K++DFG + + + + GT YLAPE I
Sbjct: 142 K---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQL--DPGEKLREVCGTPSYLAPEIIE 196
Query: 667 -----TNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ ++ D++S G+++ ++ G F
Sbjct: 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 71
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ ++ + +D I L K GLA+
Sbjct: 72 DVIHTENKLYLVFEFL----------HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 122 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 174
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 30/218 (13%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + + + G+L +++ + E + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL- 654
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA+ + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
R ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 35/225 (15%)
Query: 495 NFSVKLGQGGFGSVYQ----GVLPDGT--RLAVKKLEGIGQG--KKEFRAEVSIIGSI-H 545
F LG G FG V G+ G ++AVK L+ ++ +E+ ++ +
Sbjct: 48 EFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS 107
Query: 546 HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEF-------------------- 585
H ++V L G C L +E+ G L ++ K ++F
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 586 LLDWETRFNIALGTAKGLAYLH-EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT 644
+L +E A AKG+ +L + C +H D+ NVL+ K+ DFGLA+ +
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 645 REQSHVFT-TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEII 688
+ ++V R ++APE + + KSDV+SYG++L EI
Sbjct: 224 SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIF 268
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 74 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 130
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 131 TPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHS---AGII 186
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 187 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 244
Query: 676 DVYSYGMVLLEIIG------GRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 301
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 85/170 (50%), Gaps = 17/170 (10%)
Query: 537 EVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSL-DKWIFKKNQEFLLDWETRFNI 595
E+ I+ ++H ++K++ F + + E M G L DK + K + + +
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFT 652
L + YLHE+ IIH D+KPENVLL +++ K++DFG +K++ ++ +
Sbjct: 130 LLA----VQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 180
Query: 653 TLRGTRGYLAPEWITNYAIS---EKSDVYSYGMVLLEIIGGRKNFDPNET 699
TL GT YLAPE + + + D +S G++L + G F + T
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT 230
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 104/227 (45%), Gaps = 34/227 (14%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSI--IGSIHHLHLVKL----R 553
+G+G +G+VY+G L D +AVK ++ F E +I + + H ++ +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSF--ANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 554 GFCAEGTHR-LLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
A+G LL E+ NGSL K++ DW + +A +GLAYLH + +
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHTELPR 133
Query: 613 ------RIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT-------REQSHVFTTLRGTRG 659
I H D+ NVL+ ++ +SDFGL+ +T E+ + + GT
Sbjct: 134 GDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIR 193
Query: 660 YLAPEWI---TNYAISEKS----DVYSYGMVLLEIIGGRKNFDPNET 699
Y+APE + N E + D+Y+ G++ EI + P E+
Sbjct: 194 YMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 537 EVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSL-DKWIFKKNQEFLLDWETRFNI 595
E+ I+ ++H ++K++ F + + E M G L DK + K + + +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFT 652
L + YLHE+ IIH D+KPENVLL +++ K++DFG +K++ ++ +
Sbjct: 124 LLA----VQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 174
Query: 653 TLRGTRGYLAPEWITNYAIS---EKSDVYSYGMVLLEIIGGRKNFDPNETS 700
TL GT YLAPE + + + D +S G++L + G F + T
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 537 EVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSL-DKWIFKKNQEFLLDWETRFNI 595
E+ I+ ++H ++K++ F + + E M G L DK + K + + +
Sbjct: 64 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFT 652
L + YLHE+ IIH D+KPENVLL +++ K++DFG +K++ ++ +
Sbjct: 123 LLA----VQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 173
Query: 653 TLRGTRGYLAPEWITNYAIS---EKSDVYSYGMVLLEIIGGRKNFDPNETS 700
TL GT YLAPE + + + D +S G++L + G F + T
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 224
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 537 EVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSL-DKWIFKKNQEFLLDWETRFNI 595
E+ I+ ++H ++K++ F + + E M G L DK + K + + +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFT 652
L + YLHE+ IIH D+KPENVLL +++ K++DFG +K++ ++ +
Sbjct: 124 LLA----VQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 174
Query: 653 TLRGTRGYLAPEWITNYAIS---EKSDVYSYGMVLLEIIGGRKNFDPNETS 700
TL GT YLAPE + + + D +S G++L + G F + T
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 70
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 121 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 173
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 22/197 (11%)
Query: 516 GTRLAVKKLEGIGQGKK-----EFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMA 570
R+ K+ IG ++ E+ I+ ++H ++K++ F + + E M
Sbjct: 178 AIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELME 236
Query: 571 NGSL-DKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLL--- 626
G L DK + K + + + L + YLHE+ IIH D+KPENVLL
Sbjct: 237 GGELFDKVVGNKRLKEATCKLYFYQMLLA----VQYLHENG---IIHRDLKPENVLLSSQ 289
Query: 627 DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAIS---EKSDVYSYGMV 683
+++ K++DFG +K++ ++ + TL GT YLAPE + + + D +S G++
Sbjct: 290 EEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 347
Query: 684 LLEIIGGRKNFDPNETS 700
L + G F + T
Sbjct: 348 LFICLSGYPPFSEHRTQ 364
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ DF LA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 171
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 17/171 (9%)
Query: 537 EVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSL-DKWIFKKNQEFLLDWETRFNI 595
E+ I+ ++H ++K++ F + + E M G L DK + K + + +
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFT 652
L + YLHE+ IIH D+KPENVLL +++ K++DFG +K++ ++ +
Sbjct: 124 LLA----VQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMR 174
Query: 653 TLRGTRGYLAPEWITNYAIS---EKSDVYSYGMVLLEIIGGRKNFDPNETS 700
TL GT YLAPE + + + D +S G++L + G F + T
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ 225
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 171
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 93/197 (47%), Gaps = 22/197 (11%)
Query: 516 GTRLAVKKLEGIGQGKK-----EFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMA 570
R+ K+ IG ++ E+ I+ ++H ++K++ F + + E M
Sbjct: 164 AIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELME 222
Query: 571 NGSL-DKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLL--- 626
G L DK + K + + + L + YLHE+ IIH D+KPENVLL
Sbjct: 223 GGELFDKVVGNKRLKEATCKLYFYQMLLA----VQYLHENG---IIHRDLKPENVLLSSQ 275
Query: 627 DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAIS---EKSDVYSYGMV 683
+++ K++DFG +K++ ++ + TL GT YLAPE + + + D +S G++
Sbjct: 276 EEDCLIKITDFGHSKILG--ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVI 333
Query: 684 LLEIIGGRKNFDPNETS 700
L + G F + T
Sbjct: 334 LFICLSGYPPFSEHRTQ 350
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 171
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ FGLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
++ D++S G ++ E++ GR F + D+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 71
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 122 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 174
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 70
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 71 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 121 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 173
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 174 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 214
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 171
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 72
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 73 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 123 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 175
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 216
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 67
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 170
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ D GLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 107/217 (49%), Gaps = 20/217 (9%)
Query: 499 KLGQGGFGSVYQGV-LPDGTR-LAVKKL------EGIGQGKKEFRAEVSIIGSIHHLHLV 550
++G+G +G V++ L +G R +A+K++ EG+ A + + + H ++V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 551 KLRGFCA-----EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
+L C T L +E + + L ++ K E + ET ++ +GL +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEW 665
LH R++H D+KP+N+L+ + K++DFGLA++ + + + T++ T Y APE
Sbjct: 136 LHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 666 ITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
+ + + D++S G + E+ + F + D+
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ 227
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 500 LGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVK--- 551
+G G +G V G ++A+KK+ + + K+ R E+ I+ H +++
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIAIKD 121
Query: 552 -LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
LR G + + S I +Q L+ F L +GL Y+H
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL--LRGLKYMH--- 176
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLM---TREQSHVFTTLRGTRGYLAPEWIT 667
++IH D+KP N+L+++N K+ DFG+A+ + E + T TR Y APE +
Sbjct: 177 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 236
Query: 668 N-YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + ++ D++S G + E++ R+ F
Sbjct: 237 SLHEYTQAIDLWSVGCIFGEMLARRQLF 264
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 30/245 (12%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKE----FRAEVSIIGSIHHLHLVKLR 553
++G G FG+VY + + +A+KK+ G+ E EV + + H + ++ R
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G L E+ + D + + +++ L + E + G +GLAYLH
Sbjct: 121 GCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIA-AVTHGALQGLAYLH---SHN 174
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISE 673
+IH D+K N+LL + K+ DFG A +M V GT ++APE I A+ E
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL--AMDE 227
Query: 674 -----KSDVYSYGMVLLEIIGGRKN--FDPNETSDKAHFPSYAFKMMEEGK----LRNIL 722
K DV+S G+ +E + RK F+ N S H ++ G RN +
Sbjct: 228 GQYDGKVDVWSLGITCIE-LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV 286
Query: 723 DSRLN 727
DS L
Sbjct: 287 DSCLQ 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 71
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 72 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 122 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 174
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 67
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 170
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 104/209 (49%), Gaps = 20/209 (9%)
Query: 499 KLGQGGFGSVYQGV-LPDGTR-LAVKKL------EGIGQGKKEFRAEVSIIGSIHHLHLV 550
++G+G +G V++ L +G R +A+K++ EG+ A + + + H ++V
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 551 KLRGFCA-----EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAY 605
+L C T L +E + + L ++ K E + ET ++ +GL +
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYL-DKVPEPGVPTETIKDMMFQLLRGLDF 135
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEW 665
LH R++H D+KP+N+L+ + K++DFGLA++ + + + T++ T Y APE
Sbjct: 136 LHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTSVVVTLWYRAPEV 190
Query: 666 ITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + + D++S G + E+ + F
Sbjct: 191 LLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 34/210 (16%)
Query: 494 NNFSV----KLGQGGFGSVYQGVLPD-GTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
NNF + +LG+G F V Q + G A K L+ +G+ + RAE+ +H +
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEI-----LHEIA 80
Query: 549 LVKLRGFCA---------EGTHRL-LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALG 598
+++L C E T + L E+ A G + + E + + + +
Sbjct: 81 VLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV-IRLIKQ 139
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNY---HAKVSDFGLAKLMTREQSHV--FTT 653
+G+ YLH++ I+H D+KP+N+LL Y K+ DFG M+R+ H
Sbjct: 140 ILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFG----MSRKIGHACELRE 192
Query: 654 LRGTRGYLAPEWITNYAISEKSDVYSYGMV 683
+ GT YLAPE + I+ +D+++ G++
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGII 222
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 500 LGQGGFGSVYQGVLPD---GTRLAVKKL--EGIGQ--GKKEFRAEVSIIGSIHHLHLVKL 552
LG+G FG V + D G AVK + + Q K+ EV ++ + H +++KL
Sbjct: 40 LGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 97
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
F + + L E G L I + + +D I G+ Y+H++
Sbjct: 98 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKN--- 151
Query: 613 RIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
+I+H D+KPEN+LL+ + + ++ DFGL+ E S GT Y+APE + +
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE-VLHG 208
Query: 670 AISEKSDVYSYGMVLLEIIGG 690
EK DV+S G++L ++ G
Sbjct: 209 TYDEKCDVWSTGVILYILLSG 229
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVF 92
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLXQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---II 148
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 676 DVYSYGMVLLEIIG------GRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 69
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 120 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 172
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ D GLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 86
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 87 TPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLH---SAGII 142
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 676 DVYSYGMVLLEII------GGRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 201 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 257
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 500 LGQGGFGSVYQGVLPD---GTRLAVKKL--EGIGQ--GKKEFRAEVSIIGSIHHLHLVKL 552
LG+G FG V + D G AVK + + Q K+ EV ++ + H +++KL
Sbjct: 58 LGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 115
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
F + + L E G L I + + +D I G+ Y+H++
Sbjct: 116 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKN--- 169
Query: 613 RIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
+I+H D+KPEN+LL+ + + ++ DFGL+ E S GT Y+APE + +
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE-VLHG 226
Query: 670 AISEKSDVYSYGMVLLEIIGG 690
EK DV+S G++L ++ G
Sbjct: 227 TYDEKCDVWSTGVILYILLSG 247
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 37 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 93
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 94 TPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHS---AGII 149
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 676 DVYSYGMVLLEIIG------GRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 208 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 264
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 92
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHS---AGII 148
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 676 DVYSYGMVLLEIIG------GRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
Query: 500 LGQGGFGSVYQGVLPD---GTRLAVKKL--EGIGQ--GKKEFRAEVSIIGSIHHLHLVKL 552
LG+G FG V + D G AVK + + Q K+ EV ++ + H +++KL
Sbjct: 57 LGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKL 114
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
F + + L E G L I + + +D I G+ Y+H++
Sbjct: 115 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYMHKN--- 168
Query: 613 RIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
+I+H D+KPEN+LL+ + + ++ DFGL+ E S GT Y+APE + +
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAYYIAPE-VLHG 225
Query: 670 AISEKSDVYSYGMVLLEIIGG 690
EK DV+S G++L ++ G
Sbjct: 226 TYDEKCDVWSTGVILYILLSG 246
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 35 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 91
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 92 TPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHS---AGII 147
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 148 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 205
Query: 676 DVYSYGMVLLEIIG------GRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 206 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 262
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 69
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 70 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 120 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 172
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 173 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 213
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 30 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 86
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 87 TPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHS---AGII 142
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 143 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 200
Query: 676 DVYSYGMVLLEII------GGRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 201 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 257
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 29 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 85
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 86 TPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLH---SAGII 141
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 142 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 199
Query: 676 DVYSYGMVLLEII------GGRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 200 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 256
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 92
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLH---SAGII 148
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 676 DVYSYGMVLLEIIG------GRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 37 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVF 93
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 94 TPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLH---SAGII 149
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 150 HRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 207
Query: 676 DVYSYGMVLLEIIG------GRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 208 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 264
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 33/222 (14%)
Query: 499 KLGQGGFGSVYQG---VLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
KLG+G + +VY+G + + L +LE EVS++ + H ++V L
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNI------ALGTAKGLAYLHED 609
L +E+ LDK + +++L D N+ +GLAY H
Sbjct: 69 IHTEKSLTLVFEY-----LDKDL----KQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR- 118
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWI 666
Q+++H D+KP+N+L+++ K++DFGLA+ + T+ + TL Y P+ +
Sbjct: 119 --QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTL----WYRPPDIL 172
Query: 667 ---TNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHF 705
T+Y S + D++ G + E+ GR F + ++ HF
Sbjct: 173 LGSTDY--STQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHF 212
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GL++
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 171
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 30/245 (12%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKE----FRAEVSIIGSIHHLHLVKLR 553
++G G FG+VY + + +A+KK+ G+ E EV + + H + ++ R
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR 613
G L E+ + D + + +++ L + E + G +GLAYLH
Sbjct: 82 GCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIA-AVTHGALQGLAYLH---SHN 135
Query: 614 IIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISE 673
+IH D+K N+LL + K+ DFG A +M V GT ++APE I A+ E
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFV-----GTPYWMAPEVIL--AMDE 188
Query: 674 -----KSDVYSYGMVLLEIIGGRKN--FDPNETSDKAHFPSYAFKMMEEGK----LRNIL 722
K DV+S G+ +E + RK F+ N S H ++ G RN +
Sbjct: 189 GQYDGKVDVWSLGITCIE-LAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV 247
Query: 723 DSRLN 727
DS L
Sbjct: 248 DSCLQ 252
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 104/218 (47%), Gaps = 30/218 (13%)
Query: 500 LGQGGFGSVYQ----GVLPDGTR----LAVKKLEGIGQGKK--EFRAEVSIIGSI-HHLH 548
LG+G FG V G+ D + +AVK L+ K + +E+ ++ I H +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWI-------------FKKNQEFLLDWETRFNI 595
++ L G C + + + + G+L +++ + E + ++ +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL- 654
A+G+ YL Q+ IH D+ NVL+ +N K++DFGLA+ + + TT
Sbjct: 163 TYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 655 RGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
R ++APE + + + +SDV+S+G+++ EI +GG
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGG 257
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + Y VL +A+KKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 36 AQGIVCAAYDAVL--DRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHKNIISLLNVF 92
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + Q LD E + G+ +LH II
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAG---II 148
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T S + T TR Y APE I E
Sbjct: 149 HRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV 206
Query: 676 DVYSYGMVLLEIIG------GRKNFDP-NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ GR D N+ ++ P F + +RN +++R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENR 263
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 537 EVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIA 596
EV+++ + H +++KL F + + L E G L I + + +D
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTT 653
L G+ YLH+ I+H D+KPEN+LL+ K+ DFGL+ + E
Sbjct: 146 LS---GVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF--ENQKKMKE 197
Query: 654 LRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
GT Y+APE + EK DV+S G++L ++ G
Sbjct: 198 RLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 21/260 (8%)
Query: 496 FSVKLGQGGFGSVYQGVLPD--------GTRLAVKKLEGIGQGKKE-FRAEVSIIGSIHH 546
F+ LGQG F +++GV + T + +K L+ + E F S++ + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 547 LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
HLV G C G +L EF+ GSLD ++ K + W + +A A + +L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMHFL 129
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVF---TTLRGTRGYLAP 663
E+ +IH ++ +N+LL K + KL S L+ ++ P
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 664 EWITN-YAISEKSDVYSYGMVLLEII-GGRKNFDPNETSDKAHF--PSYAFKMMEEGKLR 719
E I N ++ +D +S+G L EI GG K ++ K F + + +L
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELA 246
Query: 720 NILDSRLNIDEQSDRVFTAV 739
N++++ ++ + F A+
Sbjct: 247 NLINNCMDYEPDHRPSFRAI 266
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 23/206 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV G R+AVKKL + I K+ +R E+ ++ + H +++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLD 88
Query: 555 F-----CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
E + + + L+ + K Q+ L D +F I +GL Y+H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIV--KCQK-LTDDHVQFLI-YQILRGLKYIHS- 143
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
IIH D+KP N+ ++++ K+ D GLA+ E T TR Y APE + N+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 670 A-ISEKSDVYSYGMVLLEIIGGRKNF 694
++ D++S G ++ E++ GR F
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRTLF 223
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 109/226 (48%), Gaps = 18/226 (7%)
Query: 532 KEFRAEVSIIGSIHHLHLVKLRGFCAEGT--HRLLAYEFMANGSLDKWIFKKNQEFLLDW 589
++ E++I+ + H ++VKL + H + +E + G + + K L +
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP---LSED 137
Query: 590 ETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH 649
+ RF KG+ YLH Q+IIH DIKP N+L+ ++ H K++DFG++ +
Sbjct: 138 QARFYFQ-DLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 650 VFTTLRGTRGYLAPEWI--TNYAISEKS-DVYSYGMVLLEIIGGRKNF-DPNETSDKAHF 705
+ T+ GT ++APE + T S K+ DV++ G+ L + G+ F D +
Sbjct: 194 LSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKI 252
Query: 706 PSYAFKMMEE----GKLRNILDSRLNIDEQSDRVFTAVKVALWCVQ 747
S A + ++ L++++ L+ + +S V +K+ W +
Sbjct: 253 KSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 500 LGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVK--- 551
+G G +G V G ++A+KK+ + + K+ R E+ I+ H +++
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFKHDNIIAIKD 120
Query: 552 -LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
LR G + + S I +Q L+ F L +GL Y+H
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQL--LRGLKYMH--- 175
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLM---TREQSHVFTTLRGTRGYLAPEWIT 667
++IH D+KP N+L+++N K+ DFG+A+ + E + T TR Y APE +
Sbjct: 176 SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELML 235
Query: 668 N-YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ + ++ D++S G + E++ R+ F
Sbjct: 236 SLHEYTQAIDLWSVGCIFGEMLARRQLF 263
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 41/226 (18%)
Query: 494 NNF-SVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQG 530
NNF SV++G F + YQ + P G+ +A+KKL +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 531 KKEFRAEVSIIGSIHHLHLVKL------RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQE 584
K+ +R E+ ++ ++H +++ L + E + E M + +L + I +
Sbjct: 68 KRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----Q 120
Query: 585 FLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT 644
LD E + G+ +LH IIH D+KP N+++ + K+ DFGLA+ T
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--T 175
Query: 645 REQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
S + T TR Y APE I E D++S G+++ E+I G
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 41/226 (18%)
Query: 494 NNF-SVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQG 530
NNF SV++G F + YQ + P G+ +A+KKL +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 531 KKEFRAEVSIIGSIHHLHLVKL------RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQE 584
K+ +R E+ ++ ++H +++ L + E + E M + +L + I +
Sbjct: 68 KRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----Q 120
Query: 585 FLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT 644
LD E + G+ +LH IIH D+KP N+++ + K+ DFGLA+ T
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--T 175
Query: 645 REQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
S + T TR Y APE I E D++S G+++ E+I G
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 27/216 (12%)
Query: 500 LGQGGFGSV---YQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+G G +GSV Y L ++AVKKL + + ++ +R E+ ++ + H +++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 553 RGFCAEGTH-----RLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLH 607
T + + L+ + + L D +F + +GL Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIV---KSQALSDEHVQF-LVYQLLRGLKYIH 148
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
IIH D+KP NV ++++ ++ DFGLA R+ T TR Y APE +
Sbjct: 149 SAG---IIHRDLKPSNVAVNEDSELRILDFGLA----RQADEEMTGYVATRWYRAPEIML 201
Query: 668 NYA-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
N+ ++ D++S G ++ E++ G+ F ++ D+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQ 237
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+ K+ E G R E+S++ ++H ++VKL
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 69 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 119 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 171
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 172 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+ K+ E G R E+S++ ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 67
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +EF+ + L K+ +D I L K GLA+
Sbjct: 68 DVIHTENKLYLVFEFL-HQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 170
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 22/236 (9%)
Query: 471 DNFLENLSGMPVRFTYRDLQTATNNFSVK--LGQGGFGSVYQGVLPDGTR--LAVKKLEG 526
DNFL + RDL+ ++ V +G+G FG V Q V TR A+K L
Sbjct: 48 DNFLSRYKDTINKI--RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSK 104
Query: 527 IGQGKKE----FRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKN 582
K+ F E I+ + +V+L + + + E+M G L + N
Sbjct: 105 FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SN 162
Query: 583 QEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKL 642
+ W RF A L +H IH D+KP+N+LLD + H K++DFG
Sbjct: 163 YDVPEKW-ARFYTA-EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 217
Query: 643 MTREQSHVFTTLRGTRGYLAPEWITNYA----ISEKSDVYSYGMVLLEIIGGRKNF 694
M +E T GT Y++PE + + + D +S G+ L E++ G F
Sbjct: 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 102/236 (43%), Gaps = 22/236 (9%)
Query: 471 DNFLENLSGMPVRFTYRDLQTATNNFSVK--LGQGGFGSVYQGVLPDGTR--LAVKKLEG 526
DNFL + RDL+ ++ V +G+G FG V Q V TR A+K L
Sbjct: 53 DNFLSRYKDTINKI--RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSK 109
Query: 527 IGQGKKE----FRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKN 582
K+ F E I+ + +V+L + + + E+M G L + N
Sbjct: 110 FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SN 167
Query: 583 QEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKL 642
+ W RF TA+ + L IH D+KP+N+LLD + H K++DFG
Sbjct: 168 YDVPEKW-ARFY----TAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 222
Query: 643 MTREQSHVFTTLRGTRGYLAPEWITNYA----ISEKSDVYSYGMVLLEIIGGRKNF 694
M +E T GT Y++PE + + + D +S G+ L E++ G F
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 22/236 (9%)
Query: 471 DNFLENLSGMPVRFTYRDLQTATNNFSVK--LGQGGFGSVYQGVLPDGTR--LAVKKLEG 526
DNFL + RDL+ ++ V +G+G FG V Q V TR A+K L
Sbjct: 53 DNFLSRYKDTINKI--RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSK 109
Query: 527 IGQGKKE----FRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKN 582
K+ F E I+ + +V+L + + + E+M G L + N
Sbjct: 110 FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SN 167
Query: 583 QEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKL 642
+ W RF A L +H IH D+KP+N+LLD + H K++DFG
Sbjct: 168 YDVPEKW-ARFYTA-EVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMK 222
Query: 643 MTREQSHVFTTLRGTRGYLAPEWITNYA----ISEKSDVYSYGMVLLEIIGGRKNF 694
M +E T GT Y++PE + + + D +S G+ L E++ G F
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 8/121 (6%)
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYL 661
L YLH ++ +++ D+K EN++LD + H K++DFGL K ++ + T GT YL
Sbjct: 260 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYL 316
Query: 662 APEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNI 721
APE + + D + G+V+ E++ GR F ++ H + +MEE +
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHEKLFELILMEEIRFPRT 371
Query: 722 L 722
L
Sbjct: 372 L 372
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQ----GKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV + G ++A+KKL Q K+ +R E+ ++ + H +++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 90
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+ Y+F + +K E + KGL Y+H +
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---V 147
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA-ISE 673
+H D+KP N+ ++++ K+ DFGLA+ E T TR Y APE I ++ ++
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQ 203
Query: 674 KSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
D++S G ++ E++ G+ F + D+
Sbjct: 204 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 232
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 8/121 (6%)
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYL 661
L YLH ++ +++ D+K EN++LD + H K++DFGL K ++ + T GT YL
Sbjct: 263 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKTFCGTPEYL 319
Query: 662 APEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNI 721
APE + + D + G+V+ E++ GR F ++ H + +MEE +
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHEKLFELILMEEIRFPRT 374
Query: 722 L 722
L
Sbjct: 375 L 375
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 537 EVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIA 596
E I+ +++ LVKL + ++ + E++A G + + + + + RF A
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YA 168
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRG 656
YLH +I+ D+KPEN+L+D + +V+DFG AK R + + TL G
Sbjct: 169 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGATW-TLCG 221
Query: 657 TRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSY 708
T YLAPE I + ++ D ++ G+++ E+ G F ++ S K FPS+
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH 281
Query: 709 AFKMMEEGKLRNILDSRL 726
F + LRN+L L
Sbjct: 282 -FSSDLKDLLRNLLQVDL 298
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQ----GKKEFRAEVSIIGSIHHLHLVKLRG 554
+G G +GSV + G ++A+KKL Q K+ +R E+ ++ + H +++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 108
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+ Y+F + +K E + KGL Y+H +
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---V 165
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA-ISE 673
+H D+KP N+ ++++ K+ DFGLA+ E T TR Y APE I ++ ++
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQ 221
Query: 674 KSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
D++S G ++ E++ G+ F + D+
Sbjct: 222 TVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 250
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 107/244 (43%), Gaps = 20/244 (8%)
Query: 464 PQETSEEDNFLENLSGMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLPD-GTRLAVK 522
P+E+S+E N G+ V + R L F LG+G FG V + + G AVK
Sbjct: 2 PKESSKEGN------GIGVNSSNR-LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVK 54
Query: 523 KLEG---IGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAY--EFMANGSLDKW 577
L+ + E I S+ H + FC T L + EF+ G L +
Sbjct: 55 VLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL-MF 113
Query: 578 IFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDF 637
+K++ F + RF A L +LH D+ II+ D+K +NVLLD H K++DF
Sbjct: 114 HIQKSRRFD-EARARF-YAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADF 168
Query: 638 GLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPN 697
G+ K T GT Y+APE + D ++ G++L E++ G F+
Sbjct: 169 GMCKEGICNGVTT-ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAE 227
Query: 698 ETSD 701
D
Sbjct: 228 NEDD 231
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 116/279 (41%), Gaps = 44/279 (15%)
Query: 488 DLQTATNNFSVKLGQGGFGSVYQGV--LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIH 545
D+ +A LG+G FG V + + G +AVK ++ + + + R+E+ ++ ++
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 546 H------LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL-LDWETRFNIALG 598
V++ + H + +E + + D F K FL + +A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYD---FIKENGFLPFRLDHIRKMAYQ 126
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLL---------------DD----NYHAKVSDFGL 639
K + +LH + ++ H D+KPEN+L D+ N KV DFG
Sbjct: 127 ICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 640 AKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNET 699
A T + H +TL TR Y APE I S+ DV+S G +L+E G F +++
Sbjct: 184 A---TYDDEH-HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239
Query: 700 SDKAHF------PSYAFKMMEEGKLRNILDSRLNIDEQS 732
+ P + + K + RL+ DE S
Sbjct: 240 KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHS 278
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 88/203 (43%), Gaps = 16/203 (7%)
Query: 495 NFSVKLGQGGFGSVYQ-GVLPDGTRLAVKKLEGIGQGKKE---FRAEVSIIGSIHHLHLV 550
N LG+G FG V + AVK + K+ EV ++ + H +++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + + + E G L I K+ + I G+ Y+H+
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK-- 139
Query: 611 DQRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
I+H D+KPEN+LL + + K+ DFGL+ +Q+ GT Y+APE +
Sbjct: 140 -HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLR 196
Query: 668 NYAISEKSDVYSYGMVLLEIIGG 690
EK DV+S G++L ++ G
Sbjct: 197 G-TYDEKCDVWSAGVILYILLSG 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 44/243 (18%)
Query: 478 SGMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFR-A 536
SG+P+ +T S+ G+G FG V++G G +AVK + + FR A
Sbjct: 30 SGLPLLVQRTIARTIVLQESI--GKGRFGEVWRGKW-RGEEVAVKIFSS-REERSWFREA 85
Query: 537 EVSIIGSIHHLHLVKLRGFCAEG-------THRLLAYEFMANGSLDKWIFKKNQEFLLDW 589
E+ + H +++ GF A T L ++ +GSL F + +
Sbjct: 86 EIYQTVMLRHENIL---GFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTV 138
Query: 590 ETRFNIALGTAKGLAYLHEDC-----DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT 644
E +AL TA GLA+LH + I H D+K +N+L+ N ++D GLA
Sbjct: 139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---V 195
Query: 645 REQSHVFTT------LRGTRGYLAPEWI------TNYAISEKSDVYSYGMVLLEI----- 687
R S T GT+ Y+APE + ++ +++D+Y+ G+V EI
Sbjct: 196 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 255
Query: 688 IGG 690
IGG
Sbjct: 256 IGG 258
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
D +I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLXGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 42/232 (18%)
Query: 500 LGQGGFGSVYQGVLPDGTR----LAVKKLEGIGQGKKEFRAEVSIIGSIHH-------LH 548
LG+G FG V + + D R +A+K + +G+ ++ R E++++ I L
Sbjct: 27 LGEGTFGKVVECL--DHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 84
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
++ F G H +A+E + + + K+N ++A L +LHE
Sbjct: 85 VLMSDWFNFHG-HMCIAFELLGKNTFE--FLKENNFQPYPLPHVRHMAYQLCHALRFLHE 141
Query: 609 DCDQRIIHCDIKPENVLLDD-------------------NYHAKVSDFGLAKLMTREQSH 649
+ ++ H D+KPEN+L + N +V+DFG A T + H
Sbjct: 142 N---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDHEH 195
Query: 650 VFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSD 701
TT+ TR Y PE I ++ DV+S G +L E G F +E +
Sbjct: 196 -HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 42/232 (18%)
Query: 500 LGQGGFGSVYQGVLPDGTR----LAVKKLEGIGQGKKEFRAEVSIIGSIHH-------LH 548
LG+G FG V + + D R +A+K + +G+ ++ R E++++ I L
Sbjct: 59 LGEGTFGKVVECL--DHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 116
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
++ F G H +A+E + + + K+N ++A L +LHE
Sbjct: 117 VLMSDWFNFHG-HMCIAFELLGKNTFE--FLKENNFQPYPLPHVRHMAYQLCHALRFLHE 173
Query: 609 DCDQRIIHCDIKPENVLLDD-------------------NYHAKVSDFGLAKLMTREQSH 649
+ ++ H D+KPEN+L + N +V+DFG A T + H
Sbjct: 174 N---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDHEH 227
Query: 650 VFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSD 701
TT+ TR Y PE I ++ DV+S G +L E G F +E +
Sbjct: 228 -HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 278
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 27/216 (12%)
Query: 500 LGQGGFGSV---YQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+G G +GSV Y L ++AVKKL + + ++ +R E+ ++ + H +++ L
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 84
Query: 553 RGFCAEGTH-----RLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLH 607
T + + L+ + + L D +F + +GL Y+H
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIV---KCQALSDEHVQF-LVYQLLRGLKYIH 140
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
IIH D+KP NV ++++ ++ DFGLA R+ T TR Y APE +
Sbjct: 141 SAG---IIHRDLKPSNVAVNEDCELRILDFGLA----RQADEEMTGYVATRWYRAPEIML 193
Query: 668 NYA-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
N+ ++ D++S G ++ E++ G+ F ++ D+
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQ 229
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 495 NFSVKLGQGGFGSVYQ-GVLPDGTRLAVKKLEGIGQGKKE---FRAEVSIIGSIHHLHLV 550
N LG+G FG V + AVK + K+ EV ++ + H +++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + + + E G L I K+ + I G+ Y+H+
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK-- 139
Query: 611 DQRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
I+H D+KPEN+LL + + K+ DFGL+ +Q+ GT Y+APE +
Sbjct: 140 -HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLR 196
Query: 668 NYAISEKSDVYSYGMVLLEIIGGRKNF 694
EK DV+S G++L ++ G F
Sbjct: 197 G-TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 67
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +E + ++ + +D I L K GLA+
Sbjct: 68 DVIHTENKLYLVFEHV----------HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R +H TL Y A
Sbjct: 118 CH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTL----WYRA 170
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 211
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F +E S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 112/260 (43%), Gaps = 21/260 (8%)
Query: 496 FSVKLGQGGFGSVYQGVLPD--------GTRLAVKKLEGIGQGKKE-FRAEVSIIGSIHH 546
F+ LGQG F +++GV + T + +K L+ + E F S++ + H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 547 LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYL 606
HLV G C G +L EF+ GSLD ++ K + W + +A A + +L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMHFL 129
Query: 607 HEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVF---TTLRGTRGYLAP 663
E+ +IH ++ +N+LL K + KL S L+ ++ P
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPP 186
Query: 664 EWITNYA-ISEKSDVYSYGMVLLEII-GGRKNFDPNETSDKAHF--PSYAFKMMEEGKLR 719
E I N ++ +D +S+G L EI GG K ++ K F + + +L
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAAELA 246
Query: 720 NILDSRLNIDEQSDRVFTAV 739
N++++ ++ + F A+
Sbjct: 247 NLINNCMDYEPDHRPSFRAI 266
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
Query: 590 ETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH 649
E + + A+G+ +L ++ IH D+ N+LL +N K+ DFGLA+ + + +
Sbjct: 199 EDLISYSFQVARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 650 VFT-TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEI--IGG 690
V R ++APE I + S KSDV+SYG++L EI +GG
Sbjct: 256 VRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGG 299
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 500 LGQGGFGSVYQGVL------PDGTRLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHL 549
LG+G FG V Q P +AVK L+ G E++A E+ I+ I HHL++
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKE-GATASEYKALMTELKILTHIGHHLNV 93
Query: 550 VKLRGFCA-EGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNI 595
V L G C +G ++ E+ G+L ++ K F L+ + ++
Sbjct: 94 VNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHM 140
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 89/207 (42%), Gaps = 16/207 (7%)
Query: 495 NFSVKLGQGGFGSVYQ-GVLPDGTRLAVKKLEGIGQGKKE---FRAEVSIIGSIHHLHLV 550
N LG+G FG V + AVK + K+ EV ++ + H +++
Sbjct: 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIM 84
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + + + E G L I K+ + I G+ Y+H+
Sbjct: 85 KLFEILEDSSSFYIVGELYTGGELFDEIIKRKR---FSEHDAARIIKQVFSGITYMHK-- 139
Query: 611 DQRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
I+H D+KPEN+LL + + K+ DFGL+ +Q+ GT Y+APE +
Sbjct: 140 -HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF--QQNTKMKDRIGTAYYIAPE-VL 195
Query: 668 NYAISEKSDVYSYGMVLLEIIGGRKNF 694
EK DV+S G++L ++ G F
Sbjct: 196 RGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
D +I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLAGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 41/226 (18%)
Query: 494 NNF-SVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQG 530
NNF SV++G F + YQ + P G+ +A+KKL +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 531 KKEFRAEVSIIGSIHHLHLVKL------RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQE 584
K+ +R E+ ++ ++H +++ L + E + E M + +L + I +
Sbjct: 68 KRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----Q 120
Query: 585 FLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT 644
LD E + G+ +LH IIH D+KP N+++ + K+ DFGLA+ T
Sbjct: 121 MELDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--T 175
Query: 645 REQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
S + T TR Y APE I E D++S G ++ E+I G
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 105
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 159
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + TL GT YLAPE I +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-TLCGTPEYLAPEIILSKG 215
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 274
Query: 723 DSRL 726
L
Sbjct: 275 QVDL 278
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 108/243 (44%), Gaps = 44/243 (18%)
Query: 478 SGMPVRFTYRDLQTATNNFSVKLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFR-A 536
SG+P+ +T S+ G+G FG V++G G +AVK + + FR A
Sbjct: 17 SGLPLLVQRTIARTIVLQESI--GKGRFGEVWRGKWR-GEEVAVKIFSS-REERSWFREA 72
Query: 537 EVSIIGSIHHLHLVKLRGFCAEG-------THRLLAYEFMANGSLDKWIFKKNQEFLLDW 589
E+ + H +++ GF A T L ++ +GSL F + +
Sbjct: 73 EIYQTVMLRHENIL---GFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTV 125
Query: 590 ETRFNIALGTAKGLAYLHEDC-----DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT 644
E +AL TA GLA+LH + I H D+K +N+L+ N ++D GLA
Sbjct: 126 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---V 182
Query: 645 REQSHVFTT------LRGTRGYLAPEWI------TNYAISEKSDVYSYGMVLLEI----- 687
R S T GT+ Y+APE + ++ +++D+Y+ G+V EI
Sbjct: 183 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS 242
Query: 688 IGG 690
IGG
Sbjct: 243 IGG 245
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 100/232 (43%), Gaps = 42/232 (18%)
Query: 500 LGQGGFGSVYQGVLPDGTR----LAVKKLEGIGQGKKEFRAEVSIIGSIHH-------LH 548
LG+G FG V + + D R +A+K + +G+ ++ R E++++ I L
Sbjct: 36 LGEGTFGKVVECL--DHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLC 93
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
++ F G H +A+E + + + K+N ++A L +LHE
Sbjct: 94 VLMSDWFNFHG-HMCIAFELLGKNTFE--FLKENNFQPYPLPHVRHMAYQLCHALRFLHE 150
Query: 609 DCDQRIIHCDIKPENVLLDD-------------------NYHAKVSDFGLAKLMTREQSH 649
+ ++ H D+KPEN+L + N +V+DFG A T + H
Sbjct: 151 N---QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA---TFDHEH 204
Query: 650 VFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSD 701
TT+ TR Y PE I ++ DV+S G +L E G F +E +
Sbjct: 205 -HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 255
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 90
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 91 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 144
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + TL GT YLAPE I +
Sbjct: 145 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-TLCGTPEYLAPEIILSKG 200
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 259
Query: 723 DSRL 726
L
Sbjct: 260 QVDL 263
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 499 KLGQGGFGSVYQGVL-PDGTRLAVKKLEGIGQGKKEFR--AEVSIIGSIHHL-HLVKLRG 554
++G G G V++ G +AVK++ G ++ R ++ ++ H ++V+ G
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFG 91
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
T +A E M + KK + + + + K L YL E +
Sbjct: 92 TFITNTDVFIAMELMGTCAEK---LKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGV 146
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT------- 667
IH D+KP N+LLD+ K+ DFG++ + +++ + G Y+APE I
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA--GCAAYMAPERIDPPDPTKP 204
Query: 668 NYAISEKSDVYSYGMVLLEIIGGR 691
+Y I ++DV+S G+ L+E+ G+
Sbjct: 205 DYDI--RADVWSLGISLVELATGQ 226
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
+G G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E+M G + + + + + RF A YLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + KV+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 21/201 (10%)
Query: 500 LGQGGFGSVYQGVLPD---GTRLAVKKL--EGIGQ--GKKEFRAEVSIIGSIHHLHLVKL 552
LG+G FG V + D G AVK + + Q K+ EV ++ + H ++ KL
Sbjct: 34 LGKGSFGEVI--LCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKL 91
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
F + + L E G L I + + +D I G+ Y H++
Sbjct: 92 YEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVLSGITYXHKN--- 145
Query: 613 RIIHCDIKPENVLLD---DNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
+I+H D+KPEN+LL+ + + ++ DFGL+ E S GT Y+APE + +
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAYYIAPE-VLHG 202
Query: 670 AISEKSDVYSYGMVLLEIIGG 690
EK DV+S G++L ++ G
Sbjct: 203 TYDEKCDVWSTGVILYILLSG 223
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 36 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 89
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 145
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D+ + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 146 --SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 199
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 200 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 258
Query: 721 ILDSRL 726
+L L
Sbjct: 259 LLQVDL 264
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 537 EVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIA 596
E I+ +++ LVKL + ++ + E++A G + + + + + RF A
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARF-YA 168
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRG 656
YLH +I+ D+KPEN+L+D + +V+DFG AK R + + L G
Sbjct: 169 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCG 221
Query: 657 TRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSY 708
T YLAPE I + ++ D ++ G+++ E+ G F ++ S K FPS+
Sbjct: 222 TPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH 281
Query: 709 AFKMMEEGKLRNILDSRL 726
F + LRN+L L
Sbjct: 282 -FSSDLKDLLRNLLQVDL 298
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 27/216 (12%)
Query: 500 LGQGGFGSV---YQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+G G +GSV Y L ++AVKKL + + ++ +R E+ ++ + H +++ L
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 553 RGFCAEGTH-----RLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLH 607
T + + L+ + + L D +F + +GL Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIV---KCQALSDEHVQF-LVYQLLRGLKYIH 148
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT 667
IIH D+KP NV ++++ ++ DFGLA R+ T TR Y APE +
Sbjct: 149 SAG---IIHRDLKPSNVAVNEDSELRILDFGLA----RQADEEMTGYVATRWYRAPEIML 201
Query: 668 NYA-ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
N+ ++ D++S G ++ E++ G+ F ++ D+
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQ 237
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 42/221 (19%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFR-AEVSIIGSIHHLHLVKLRGFCAE 558
+G+G FG V++G G +AVK + + FR AE+ + H +++ GF A
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENIL---GFIAA 65
Query: 559 G-------THRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC- 610
T L ++ +GSL F + + E +AL TA GLA+LH +
Sbjct: 66 DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 121
Query: 611 ----DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT------LRGTRGY 660
I H D+K +N+L+ N ++D GLA R S T GT+ Y
Sbjct: 122 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRY 178
Query: 661 LAPEWI------TNYAISEKSDVYSYGMVLLEI-----IGG 690
+APE + ++ +++D+Y+ G+V EI IGG
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 219
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
+G G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E+M G + + + + + RF A YLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + KV+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 494 NNFSVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQGK 531
N +SV++G F + YQ + P G+ +A+KKL + K
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK 68
Query: 532 KEFRAEVSIIGSIHHLHLVKLRG-FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
+ +R E+ ++ ++H +++ L F + + ++ +D + + Q LD E
Sbjct: 69 RAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHE 126
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ G+ +LH IIH D+KP N+++ + K+ DFGLA+ T S +
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFM 181
Query: 651 FTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
T TR Y APE I E D++S G ++ E+I G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 482 VRFTYRDLQTATNNFSVK--LGQGGFGSVYQGVLPDGTRL--AVKKLEGIGQGKKEFRAE 537
V+ +R+ T+ + VK +G G + SV + + T + AVK I + K++ E
Sbjct: 10 VQQLHRNSIQFTDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKI---IDKSKRDPTEE 65
Query: 538 VSIIGSI-HHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIA 596
+ I+ H +++ L+ +G + + E M G L I + Q+F + E +
Sbjct: 66 IEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR--QKFFSEREAS-AVL 122
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDN----YHAKVSDFGLAKLMTREQSHVFT 652
K + YLH Q ++H D+KP N+L D ++ DFG AK + R ++ +
Sbjct: 123 FTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLM 178
Query: 653 TLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF--DPNETSDK 702
T T ++APE + D++S G++L ++ G F P++T ++
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEE 230
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 109/240 (45%), Gaps = 24/240 (10%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVKKLEGIGQGK-KEFRA---EVSIIGSIHHLHLVKLRG 554
LG G FG V + G A+K L+ K KE E I+ +++ LVKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+ ++ + E+ G + + + + + RF A YLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH---SLDL 162
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
I+ D+KPEN+++D + KV+DFGLAK R + + L GT YLAPE I + ++
Sbjct: 163 IYRDLKPENLMIDQQGYIKVTDFGLAK---RVKGRTW-XLCGTPEYLAPEIILSKGYNKA 218
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNILDSRL 726
D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLLQVDL 277
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 514 PDGTRLAVKK--LEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMAN 571
P ++A+K+ LE E E+ + HH ++V L + ++
Sbjct: 38 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 97
Query: 572 GS-LD--KWIFKKNQEF--LLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLL 626
GS LD K I K + +LD T I +GL YLH++ IH D+K N+LL
Sbjct: 98 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 154
Query: 627 DDNYHAKVSDFGLAKLMTR----EQSHVFTTLRGTRGYLAPEWITNY-AISEKSDVYSYG 681
++ +++DFG++ + ++ V T GT ++APE + K+D++S+G
Sbjct: 155 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG 214
Query: 682 MVLLEIIGG 690
+ +E+ G
Sbjct: 215 ITAIELATG 223
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++A G + + + + + RF A YLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 42/221 (19%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFR-AEVSIIGSIHHLHLVKLRGFCAE 558
+G+G FG V++G G +AVK + + FR AE+ + H +++ GF A
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENIL---GFIAA 71
Query: 559 G-------THRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC- 610
T L ++ +GSL F + + E +AL TA GLA+LH +
Sbjct: 72 DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 127
Query: 611 ----DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT------LRGTRGY 660
I H D+K +N+L+ N ++D GLA R S T GT+ Y
Sbjct: 128 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRY 184
Query: 661 LAPEWI------TNYAISEKSDVYSYGMVLLEI-----IGG 690
+APE + ++ +++D+Y+ G+V EI IGG
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 225
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 514 PDGTRLAVKK--LEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMAN 571
P ++A+K+ LE E E+ + HH ++V L + ++
Sbjct: 33 PKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSG 92
Query: 572 GS-LD--KWIFKKNQEF--LLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLL 626
GS LD K I K + +LD T I +GL YLH++ IH D+K N+LL
Sbjct: 93 GSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILL 149
Query: 627 DDNYHAKVSDFGLAKLMTR----EQSHVFTTLRGTRGYLAPEWITNY-AISEKSDVYSYG 681
++ +++DFG++ + ++ V T GT ++APE + K+D++S+G
Sbjct: 150 GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG 209
Query: 682 MVLLEIIGG 690
+ +E+ G
Sbjct: 210 ITAIELATG 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 41/226 (18%)
Query: 494 NNF-SVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQG 530
NNF SV++G F + YQ + P G+ +A+KKL +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 531 KKEFRAEVSIIGSIHHLHLVKL------RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQE 584
K+ +R E+ ++ ++H +++ L + E + E M + +L + I +
Sbjct: 68 KRAYR-ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----Q 120
Query: 585 FLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT 644
LD E + G+ +LH IIH D+KP N+++ + K+ DFGLA+ T
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--T 175
Query: 645 REQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
S + T TR Y APE I E D++S G ++ E+I G
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 42/221 (19%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFR-AEVSIIGSIHHLHLVKLRGFCAE 558
+G+G FG V++G G +AVK + + FR AE+ + H +++ GF A
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENIL---GFIAA 66
Query: 559 G-------THRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC- 610
T L ++ +GSL F + + E +AL TA GLA+LH +
Sbjct: 67 DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 122
Query: 611 ----DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT------LRGTRGY 660
I H D+K +N+L+ N ++D GLA R S T GT+ Y
Sbjct: 123 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRY 179
Query: 661 LAPEWI------TNYAISEKSDVYSYGMVLLEI-----IGG 690
+APE + ++ +++D+Y+ G+V EI IGG
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 220
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 41/226 (18%)
Query: 494 NNF-SVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQG 530
NNF SV++G F + YQ + P G+ +A+KKL +
Sbjct: 8 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 67
Query: 531 KKEFRAEVSIIGSIHHLHLVKL------RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQE 584
K+ +R E+ ++ ++H +++ L + E + E M + +L + I +
Sbjct: 68 KRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----Q 120
Query: 585 FLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMT 644
LD E + G+ +LH IIH D+KP N+++ + K+ DFGLA+ T
Sbjct: 121 MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR--T 175
Query: 645 REQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
S + T TR Y APE I E D++S G ++ E+I G
Sbjct: 176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 494 NNFSVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQGK 531
N +SV++G F + YQ + P G+ +A+KKL + K
Sbjct: 10 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK 69
Query: 532 KEFRAEVSIIGSIHHLHLVKLRG-FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
+ +R E+ ++ ++H +++ L F + + ++ +D + + Q LD E
Sbjct: 70 RAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHE 127
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ G+ +LH IIH D+KP N+++ + K+ DFGLA+ T S +
Sbjct: 128 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFM 182
Query: 651 FTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
T TR Y APE I E D++S G ++ E+I G
Sbjct: 183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 21/237 (8%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG-F 555
QG + + VL G +AVKKL + K+ +R E+ ++ ++H +++ L F
Sbjct: 36 AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVF 92
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
+ T ++ +D + + LD E + G+ +LH II
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQVIH-MELDHERMSYLLYQMLCGIKHLH---SAGII 148
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
H D+KP N+++ + K+ DFGLA+ T + + T TR Y APE I +
Sbjct: 149 HRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYYRAPEVILGMGYAANV 206
Query: 676 DVYSYGMVLLEIIGGRKNFDP-------NETSDKAHFPSYAFKMMEEGKLRNILDSR 725
D++S G ++ E++ G F N+ ++ PS F + +RN +++R
Sbjct: 207 DIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENR 263
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 42/221 (19%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFR-AEVSIIGSIHHLHLVKLRGFCAE 558
+G+G FG V++G G +AVK + + FR AE+ + H +++ GF A
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSS-REERSWFREAEIYQTVMLRHENIL---GFIAA 68
Query: 559 G-------THRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC- 610
T L ++ +GSL F + + E +AL TA GLA+LH +
Sbjct: 69 DNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIV 124
Query: 611 ----DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTT------LRGTRGY 660
I H D+K +N+L+ N ++D GLA R S T GT+ Y
Sbjct: 125 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---VRHDSATDTIDIAPNHRVGTKRY 181
Query: 661 LAPEWI------TNYAISEKSDVYSYGMVLLEI-----IGG 690
+APE + ++ +++D+Y+ G+V EI IGG
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 222
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 44 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 97
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLH- 153
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 154 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 207
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 208 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 266
Query: 721 ILDSRL 726
+L L
Sbjct: 267 LLQVDL 272
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FAEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 97/227 (42%), Gaps = 27/227 (11%)
Query: 489 LQTATNNFSVK---------LGQGGFGSVYQGV-LPDGTRLAVKKLEGI--GQGKKEFRA 536
Q A NF VK LG+G +G V + +P G AVK++ Q +K
Sbjct: 22 FQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLX 81
Query: 537 EVSI-IGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKW---IFKKNQEFLLDWETR 592
++ I ++ V G + E + + SLDK+ + K Q D +
Sbjct: 82 DLDISXRTVDCPFTVTFYGALFREGDVWICXE-LXDTSLDKFYKQVIDKGQTIPEDILGK 140
Query: 593 FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT 652
IA+ K L +LH +IH D+KP NVL++ K DFG++ + + +
Sbjct: 141 --IAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID 196
Query: 653 TLRGTRGYLAPEWI----TNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
G + Y APE I S KSD++S G+ +E+ R +D
Sbjct: 197 A--GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYD 241
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 40/225 (17%)
Query: 494 NNFSVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQGK 531
N +SV++G F + YQ + P G+ +A+KKL + K
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK 68
Query: 532 KEFRAEVSIIGSIHHLHLVKL------RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEF 585
+ +R E+ ++ ++H +++ L + E + E M + +L + I +
Sbjct: 69 RAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVI-----QM 121
Query: 586 LLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTR 645
LD E + G+ +LH IIH D+KP N+++ + K+ DFGLA+ T
Sbjct: 122 ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TA 176
Query: 646 EQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
S + T TR Y APE I E D++S G ++ E+I G
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 494 NNFSVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQGK 531
N +SV++G F + YQ + P G+ +A+KKL + K
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK 68
Query: 532 KEFRAEVSIIGSIHHLHLVKLRG-FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
+ +R E+ ++ ++H +++ L F + + ++ +D + + Q LD E
Sbjct: 69 RAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHE 126
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ G+ +LH IIH D+KP N+++ + K+ DFGLA+ T S +
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFM 181
Query: 651 FTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
T TR Y APE I E D++S G ++ E+I G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEV--------------SIIGSIH 545
LG+G FG V L +K G K R EV ++ +
Sbjct: 13 LGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 546 HLHLVKLRGFCAEGTHRLLAY--EFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGL 603
H L L+ A TH L + E+ G L F ++E + E L
Sbjct: 64 HPFLTALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSAL 118
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAP 663
YLH + +++ DIK EN++LD + H K++DFGL K + + T GT YLAP
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAP 174
Query: 664 EWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNIL 722
E + + D + G+V+ E++ GR F ++ H + +MEE + L
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHERLFELILMEEIRFPRTL 228
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 35/221 (15%)
Query: 499 KLGQGGFGSVYQGVLP-DGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
K+G+G +G VY+ G +A+KK+ E G R E+S++ ++H ++VKL
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNHPNIVKLL 71
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAK--------GLAY 605
L +E + + L K+ +D I L K GLA+
Sbjct: 72 DVIHTENKLYLVFEHV-DQDLKKF---------MDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 606 LHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLA 662
H R++H D+KP+N+L++ K++DFGLA+ + R H TL Y A
Sbjct: 122 CHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTL----WYRA 174
Query: 663 PEWITN-YAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
PE + S D++S G + E++ R F + D+
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 215
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEV--------------SIIGSIH 545
LG+G FG V L +K G K R EV ++ +
Sbjct: 13 LGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 546 HLHLVKLRGFCAEGTHRLLAY--EFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGL 603
H L L+ A TH L + E+ G L F ++E + E L
Sbjct: 64 HPFLTALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSAL 118
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAP 663
YLH + +++ DIK EN++LD + H K++DFGL K + + T GT YLAP
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAP 174
Query: 664 EWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNIL 722
E + + D + G+V+ E++ GR F ++ H + +MEE + L
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHERLFELILMEEIRFPRTL 228
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTR--LAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+F +G G FG V + + T+ +AVK +E + + E+ S+ H ++V+
Sbjct: 23 DFVKDIGSGNFG-VARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRF 81
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
+ TH + E+ + G L + I N + E RF G++Y H
Sbjct: 82 KEVILTPTHLAIIMEYASGGELYERIC--NAGRFSEDEARFFFQ-QLLSGVSYCHS---M 135
Query: 613 RIIHCDIKPENVLLDDN--YHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWIT 667
+I H D+K EN LLD + K+ DFG +K L ++ +S V GT Y+APE +
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-----GTPAYIAPEVLL 190
Query: 668 NYAISEK-SDVYSYGMVLLEIIGGRKNF-DPNETSD 701
K +DV+S G+ L ++ G F DP E D
Sbjct: 191 RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 30/220 (13%)
Query: 494 NNFSVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQGK 531
N +SV++G F + YQ + P G+ +A+KKL + K
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK 68
Query: 532 KEFRAEVSIIGSIHHLHLVKLRG-FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
+ +R E+ ++ ++H +++ L F + + ++ +D + + Q LD E
Sbjct: 69 RAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHE 126
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ G+ +LH IIH D+KP N+++ + K+ DFGLA+ T S +
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFM 181
Query: 651 FTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
T TR Y APE I E D++S G ++ E+I G
Sbjct: 182 MTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 50 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 103
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 159
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 213
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 214 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 272
Query: 721 ILDSRL 726
+L L
Sbjct: 273 LLQVDL 278
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 8/105 (7%)
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK--LMTREQSHVFTTLRGTRG 659
GL +LH + I++ D+K +N+LLD + H K++DFG+ K ++ +++ F GT
Sbjct: 130 GLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC---GTPD 183
Query: 660 YLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAH 704
Y+APE + + D +S+G++L E++ G+ F + + H
Sbjct: 184 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 499 KLGQGGFGSVYQGVLPDGTR------LAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG+G F V + V T+ + KKL K E E I + H ++V+L
Sbjct: 38 ELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE--REARICRLLKHPNIVRL 95
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
+E L ++ + G L + I + E+ + + I + + ++H+
Sbjct: 96 HDSISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIH-QILESVNHIHQ---H 149
Query: 613 RIIHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
I+H D+KPEN+LL K++DFGLA + EQ F GT GYL+PE +
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG-FAGTPGYLSPEVLRKD 208
Query: 670 AISEKSDVYSYGMVLLEIIGGRKNF 694
+ D+++ G++L ++ G F
Sbjct: 209 PYGKPVDIWACGVILYILLVGYPPF 233
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 98/239 (41%), Gaps = 39/239 (16%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEV--------------SIIGSIH 545
LG+G FG V L +K G K R EV ++ +
Sbjct: 16 LGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 546 HLHLVKLRGFCAEGTHRLLAY--EFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGL 603
H L L+ A TH L + E+ G L F ++E + E L
Sbjct: 67 HPFLTALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSAL 121
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAP 663
YLH + +++ DIK EN++LD + H K++DFGL K + + T GT YLAP
Sbjct: 122 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKTFCGTPEYLAP 177
Query: 664 EWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNIL 722
E + + D + G+V+ E++ GR F ++ H + +MEE + L
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHERLFELILMEEIRFPRTL 231
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 8/107 (7%)
Query: 608 EDCDQR-IIHCDIKPENVLLDDNYH-AKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEW 665
+ C R ++H DIK EN+L+D AK+ DFG L+ E +T GTR Y PEW
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEW 209
Query: 666 ITNYAISE-KSDVYSYGMVLLEIIGGRKNFDPNETSDKA--HFPSYA 709
I+ + + V+S G++L +++ G F+ ++ +A HFP++
Sbjct: 210 ISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHV 256
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 99/200 (49%), Gaps = 15/200 (7%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHH-LHLVKLRGFC 556
KLG+G + V++ + + + ++ VK L+ + + K + E+ I+ ++ +++ L
Sbjct: 44 KLGRGKYSEVFEAINITNNEKVVVKILKPVKKNK--IKREIKILENLRGGPNIITLADIV 101
Query: 557 AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIH 616
+ R A F + D FK+ + L D++ RF + K L Y H I+H
Sbjct: 102 KDPVSRTPALVFEHVNNTD---FKQLYQTLTDYDIRFYM-YEILKALDYCHS---MGIMH 154
Query: 617 CDIKPENVLLDDNYHA-KVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKS 675
D+KP NV++D + ++ D+GLA+ Q + +R + PE + +Y + + S
Sbjct: 155 RDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--YNVRVASRYFKGPELLVDYQMYDYS 212
Query: 676 -DVYSYGMVLLEIIGGRKNF 694
D++S G +L +I ++ F
Sbjct: 213 LDMWSLGCMLASMIFRKEPF 232
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+++D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 --SLDLIYRDLKPENLIIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIIIS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 100/250 (40%), Gaps = 42/250 (16%)
Query: 482 VRFTYRDLQTATNNFSV--KLGQGGFGSVYQGVLPDGTRL-AVKKLEGIGQGKKEFRAEV 538
V F+++ N F V K+G G FG V D + AVK + I + + + E
Sbjct: 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEA 82
Query: 539 SIIGSIHHLHL-----VKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRF 593
I+ I + + VK G H L +E + SL + I + N + +
Sbjct: 83 DILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLG-PSLYEIITRNNYNGFHIEDIKL 141
Query: 594 NIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAK-------------------- 633
+ K L YL + + H D+KPEN+LLDD Y K
Sbjct: 142 -YCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK 197
Query: 634 -----VSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEII 688
+ DFG A +S ++ TR Y APE I N SD++S+G VL E+
Sbjct: 198 STGIKLIDFGCATF----KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELY 253
Query: 689 GGRKNFDPNE 698
G F +E
Sbjct: 254 TGSLLFRTHE 263
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE- 558
+G+G +G V++G G +AVK + +K + E + ++ H + GF A
Sbjct: 45 VGKGRYGEVWRGSW-QGENVAVKIFSS--RDEKSWFRETELYNTVMLRH-ENILGFIASD 100
Query: 559 ------GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC-- 610
T L + GSL ++ Q LD + I L A GLA+LH +
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 156
Query: 611 ---DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE--QSHVFTTLR-GTRGYLAPE 664
I H D+K +N+L+ N ++D GLA + ++ Q V R GT+ Y+APE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 216
Query: 665 WITN------YAISEKSDVYSYGMVLLEI 687
+ + ++ D++++G+VL E+
Sbjct: 217 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 19/217 (8%)
Query: 488 DLQTATNNFSVK--LGQGGFGSVY--QGVLPDGTRLAVKKLEGIGQG----KKEFRAEVS 539
D Q N+ ++ +G+G F V + VL G +AVK ++ +K FR EV
Sbjct: 9 DEQPHIGNYRLQKTIGKGNFAKVKLARHVLT-GREVAVKIIDKTQLNPTSLQKLFR-EVR 66
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT 599
I+ ++H ++VKL L E+ + G + ++ + + +F
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QI 123
Query: 600 AKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRG 659
+ Y H+ + I+H D+K EN+LLD + + K++DFG + T + T G+
Sbjct: 124 VSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFT--VGNKLDTFCGSPP 178
Query: 660 YLAPEWITNYAIS-EKSDVYSYGMVLLEIIGGRKNFD 695
Y APE + DV+S G++L ++ G FD
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 105
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLH--- 159
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 215
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 274
Query: 723 DSRL 726
L
Sbjct: 275 QVDL 278
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 113/282 (40%), Gaps = 37/282 (13%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGK-KEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+G+G FG VY G + + +E + + K F+ EV H ++V G C
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
H + +L + ++ + +LD IA KG+ YLH + I+H D
Sbjct: 101 PPHLAIITSLCKGRTL--YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKD 155
Query: 619 IKPENVLLDDNYHAKVSDFGL----AKLMTREQSHVFTTLRGTRGYLAPEWITNYA---- 670
+K +NV DN ++DFGL L + G +LAPE I +
Sbjct: 156 LKSKNVFY-DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 671 -----ISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNILDSR 725
S+ SDV++ G + E+ E K M G N+ S+
Sbjct: 215 EDKLPFSKHSDVFALGTIWYEL-------HAREWPFKTQPAEAIIWQMGTGMKPNL--SQ 265
Query: 726 LNI-DEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
+ + E SD + L+C + RP+ TK++ MLE +
Sbjct: 266 IGMGKEISD-------ILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 8/105 (7%)
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAK--LMTREQSHVFTTLRGTRG 659
GL +LH + I++ D+K +N+LLD + H K++DFG+ K ++ +++ F GT
Sbjct: 131 GLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC---GTPD 184
Query: 660 YLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAH 704
Y+APE + + D +S+G++L E++ G+ F + + H
Sbjct: 185 YIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 229
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
YLH +I+ D+KPEN+L+D + KV+DFG AK R + + L GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTW-XLCGTPEYLA 206
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMME 714
PE I + ++ D ++ G+++ E+ G F ++ S K FPS+ F
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDL 265
Query: 715 EGKLRNILDSRL 726
+ LRN+L L
Sbjct: 266 KDLLRNLLQVDL 277
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
YLH +I+ D+KPEN+L+D + KV+DFG AK R + + L GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK---RVKGRTW-XLCGTPEYLA 207
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMME 714
PE I + ++ D ++ G+++ E+ G F ++ S K FPS+ F
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDL 266
Query: 715 EGKLRNILDSRL 726
+ LRN+L L
Sbjct: 267 KDLLRNLLQVDL 278
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 488 DLQTATNNFSVK--LGQGGFGSVYQGVLPDGTRLAVKKL-EGIGQGK-----------KE 533
+L + ++V+ + G +G+V GV +G +A+K++ + G+ K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 534 FRAEVSIIGSIHHLHLVKLRG----FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDW 589
E+ ++ HH +++ LR F H+L + L + I +Q ++
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI--HDQRIVISP 133
Query: 590 ETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE--Q 647
+ GL LHE ++H D+ P N+LL DN + DF LA+ T + +
Sbjct: 134 QHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 648 SHVFTTLRGTRGYLAPEWITNY-AISEKSDVYSYGMVLLEIIGGRKNF 694
+H T R Y APE + + ++ D++S G V+ E+ + F
Sbjct: 191 THYVT----HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 42/227 (18%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKL----EGIGQGKKEFRAEVSIIGSIH-HLHLVKL 552
KLG+G +G V++ + G +AVKK+ + ++ FR E+ I+ + H ++V L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNL 74
Query: 553 RGFCAEGTHR--LLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
R L +++M + + N +L+ + + K + YLH
Sbjct: 75 LNVLRADNDRDVYLVFDYMETDL--HAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAK-------------LMTREQSH-------V 650
++H D+KP N+LL+ H KV+DFGL++ L E + +
Sbjct: 130 ---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 651 FTTLRGTRGYLAPEWI---TNYAISEKSDVYSYGMVLLEIIGGRKNF 694
T TR Y APE + T Y ++ D++S G +L EI+ G+ F
Sbjct: 187 LTDYVATRWYRAPEILLGSTKY--TKGIDMWSLGCILGEILCGKPIF 231
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 24/240 (10%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVKKLEGIGQGK-KEFRA---EVSIIGSIHHLHLVKLRG 554
LG G FG V + G A+K L+ K KE E I+ +++ LVKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+ ++ + E+ G + + + + + RF A YLH +
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH---SLDL 162
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEK 674
I+ D+KPEN+++D + +V+DFGLAK R + + L GT YLAPE I + ++
Sbjct: 163 IYRDLKPENLMIDQQGYIQVTDFGLAK---RVKGRTW-XLCGTPEYLAPEIILSKGYNKA 218
Query: 675 SDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNILDSRL 726
D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L L
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLLQVDL 277
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 99/221 (44%), Gaps = 31/221 (14%)
Query: 494 NNF-SVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQG 530
NNF SV++G F + YQ + P G+ +A+KKL +
Sbjct: 10 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 69
Query: 531 KKEFRAEVSIIGSIHHLHLVKLRG-FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDW 589
K+ +R E+ ++ ++H +++ L F + + ++ +D + + Q LD
Sbjct: 70 KRAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDH 127
Query: 590 ETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH 649
E + G+ +LH IIH D+KP N+++ + K+ DFGLA+ T S
Sbjct: 128 ERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSF 182
Query: 650 VFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
+ TR Y APE I E D++S G ++ E+I G
Sbjct: 183 MMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE- 558
+G+G +G V++G G +AVK + +K + E + ++ H + GF A
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSS--RDEKSWFRETELYNTVMLRH-ENILGFIASD 71
Query: 559 ------GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC-- 610
T L + GSL ++ Q LD + I L A GLA+LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 611 ---DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE--QSHVFTTLR-GTRGYLAPE 664
I H D+K +N+L+ N ++D GLA + ++ Q V R GT+ Y+APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 665 WITN------YAISEKSDVYSYGMVLLEI 687
+ + ++ D++++G+VL E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 108/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E+ G + + + + + RF A YLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+++D + KV+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYL 661
L YLH ++ +++ D+K EN++LD + H K++DFGL K ++ + GT YL
Sbjct: 122 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYL 178
Query: 662 APEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNI 721
APE + + D + G+V+ E++ GR F ++ H + +MEE +
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHEKLFELILMEEIRFPRT 233
Query: 722 L 722
L
Sbjct: 234 L 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYL 661
L YLH ++ +++ D+K EN++LD + H K++DFGL K ++ + GT YL
Sbjct: 120 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYL 176
Query: 662 APEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNI 721
APE + + D + G+V+ E++ GR F ++ H + +MEE +
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHEKLFELILMEEIRFPRT 231
Query: 722 L 722
L
Sbjct: 232 L 232
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYL 661
L YLH ++ +++ D+K EN++LD + H K++DFGL K ++ + GT YL
Sbjct: 121 ALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-TMKXFCGTPEYL 177
Query: 662 APEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNI 721
APE + + D + G+V+ E++ GR F ++ H + +MEE +
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHEKLFELILMEEIRFPRT 232
Query: 722 L 722
L
Sbjct: 233 L 233
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGI---GQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+LG+G F V + V + G A K + + ++ E I + H ++V+L
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR- 613
+E H L ++ + G L + I + D L A LH C Q
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-----AVLH--CHQMG 141
Query: 614 IIHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
++H D+KPEN+LL K++DFGLA + EQ F GT GYL+PE +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG-FAGTPGYLSPEVLRKDP 200
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNF 694
+ D+++ G++L ++ G F
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPF 224
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 30/228 (13%)
Query: 488 DLQTATNNFSVK--LGQGGFGSVYQGVLPDGTRLAVKKL-EGIGQGK-----------KE 533
+L + ++V+ + G +G+V GV +G +A+K++ + G+ K
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 534 FRAEVSIIGSIHHLHLVKLRG----FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDW 589
E+ ++ HH +++ LR F H+L + L + I +Q ++
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVI--HDQRIVISP 133
Query: 590 ETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE--Q 647
+ GL LHE ++H D+ P N+LL DN + DF LA+ T + +
Sbjct: 134 QHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLAREDTADANK 190
Query: 648 SHVFTTLRGTRGYLAPEWITNY-AISEKSDVYSYGMVLLEIIGGRKNF 694
+H T R Y APE + + ++ D++S G V+ E+ + F
Sbjct: 191 THYVT----HRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 37/262 (14%)
Query: 494 NNFSVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQGK 531
N +SV++G F + YQ + P G+ +A+KKL + K
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK 68
Query: 532 KEFRAEVSIIGSIHHLHLVKLRG-FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
+ +R E+ ++ ++H +++ L F + + ++ +D + + Q LD E
Sbjct: 69 RAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHE 126
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ G+ +LH IIH D+KP N+++ + K+ DFGLA+ T S +
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFM 181
Query: 651 FTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEII------GGRKNFDP-NETSDKA 703
TR Y APE I E D++S G ++ E++ GR D N+ ++
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQL 241
Query: 704 HFPSYAFKMMEEGKLRNILDSR 725
P AF + +RN +++R
Sbjct: 242 GTPCPAFMKKLQPTVRNYVENR 263
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 12/197 (6%)
Query: 499 KLGQGGFGSVYQGVLPD-GTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLRG 554
K+G+G +G V++ D G +A+KK E KK E+ ++ + H +LV L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
L +E+ + L + + Q + + + +I T + + + H+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVK-SITWQTLQAVNFCHK---HNC 123
Query: 615 IHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWIT-NYAISE 673
IH D+KPEN+L+ + K+ DFG A+L+T S + TR Y +PE + +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLT-GPSDYYDDEVATRWYRSPELLVGDTQYGP 182
Query: 674 KSDVYSYGMVLLEIIGG 690
DV++ G V E++ G
Sbjct: 183 PVDVWAIGCVFAELLSG 199
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%), Gaps = 17/216 (7%)
Query: 488 DLQTATNNFSV--KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQG----KKEFRAEVSI 540
D Q N+ + +G+G F V + G +A+K ++ +K FR EV I
Sbjct: 6 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRI 64
Query: 541 IGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA 600
+ ++H ++VKL L E+ + G + ++ + + ++F
Sbjct: 65 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIV 121
Query: 601 KGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGY 660
+ Y H+ +RI+H D+K EN+LLD + + K++DFG + T T G+ Y
Sbjct: 122 SAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFT--VGGKLDTFCGSPPY 176
Query: 661 LAPEWITNYAIS-EKSDVYSYGMVLLEIIGGRKNFD 695
APE + DV+S G++L ++ G FD
Sbjct: 177 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE- 558
+G+G +G V++G G +AVK + +K + E + ++ H + GF A
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSS--RDEKSWFRETELYNTVMLRH-ENILGFIASD 71
Query: 559 ------GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC-- 610
T L + GSL ++ Q LD + I L A GLA+LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLRIVLSIASGLAHLHIEIFG 127
Query: 611 ---DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTRE--QSHVFTTLR-GTRGYLAPE 664
I H D+K +N+L+ N ++D GLA + ++ Q V R GT+ Y+APE
Sbjct: 128 TQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPE 187
Query: 665 WITN------YAISEKSDVYSYGMVLLEI 687
+ + ++ D++++G+VL E+
Sbjct: 188 VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 95
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++ G + + + + + RF A YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARF-YAAQIVLTFEYLH- 151
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 205
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 206 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 264
Query: 721 ILDSRL 726
+L L
Sbjct: 265 LLQVDL 270
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 105
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 106 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 159
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 215
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 274
Query: 723 DSRL 726
L
Sbjct: 275 QVDL 278
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
YLH +I+ D+KPEN+++D + KV+DFG AK R + + L GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLA 207
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMME 714
PE I + ++ D ++ G+++ E+ G F ++ S K FPS+
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF----- 262
Query: 715 EGKLRNILDSRLNID 729
L+++L + L +D
Sbjct: 263 SSDLKDLLRNLLQVD 277
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
YLH +I+ D+KPEN+++D + KV+DFG AK R + + L GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLA 207
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMME 714
PE I + ++ D ++ G+++ E+ G F ++ S K FPS+
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF----- 262
Query: 715 EGKLRNILDSRLNID 729
L+++L + L +D
Sbjct: 263 SSDLKDLLRNLLQVD 277
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 116/281 (41%), Gaps = 48/281 (17%)
Query: 488 DLQTATNNFSVKLGQGGFGSVYQGV--LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIH 545
D+ +A LG+G FG V + + G +AVK ++ + + + R+E+ ++ ++
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 546 H------LHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFL-LDWETRFNIALG 598
V++ + H + +E + + D F K FL + +A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYD---FIKENGFLPFRLDHIRKMAYQ 126
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLL---------------DD----NYHAKVSDFGL 639
K + +LH + ++ H D+KPEN+L D+ N KV DFG
Sbjct: 127 ICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 640 AKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNET 699
A T + H +TL R Y APE I S+ DV+S G +L+E G F +++
Sbjct: 184 A---TYDDEH-HSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239
Query: 700 SDKAHF--------PSYAFKMMEEGKLRNILDSRLNIDEQS 732
K H P + + K + RL+ DE S
Sbjct: 240 --KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHS 278
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 110/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ ++ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 500 LGQGGFGSVYQGVLP--DGT--RLAVKKLEG---IGQGKKEFRAEVSIIGSIHHLHLVKL 552
LG+G FGSV + L DG+ ++AVK L+ +EF E + + H H+ KL
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 553 RGFCAEGTHR------LLAYEFMANGSLDKWIFKK---NQEFLLDWETRFNIALGTAKGL 603
G + ++ FM +G L ++ F L +T + A G+
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGM 150
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLA-KLMTREQSHVFTTLRGTRGYLA 662
YL + IH D+ N +L ++ V+DFGL+ K+ + + + +LA
Sbjct: 151 EYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLA 207
Query: 663 PEWITNYAISEKSDVYSYGMVLLEII 688
E + + + SDV+++G+ + EI+
Sbjct: 208 LESLADNLYTVHSDVWAFGVTMWEIM 233
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
YLH +I+ D+KPEN+++D + KV+DFG AK R + + L GT YLA
Sbjct: 154 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLA 206
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMME 714
PE I + ++ D ++ G+++ E+ G F ++ S K FPS+ F
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDL 265
Query: 715 EGKLRNILDSRL 726
+ LRN+L L
Sbjct: 266 KDLLRNLLQVDL 277
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
YLH +I+ D+KPEN+++D + KV+DFG AK R + + L GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLA 207
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMME 714
PE I + ++ D ++ G+++ E+ G F ++ S K FPS+
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF----- 262
Query: 715 EGKLRNILDSRLNID 729
L+++L + L +D
Sbjct: 263 SSDLKDLLRNLLQVD 277
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
YLH +I+ D+KPEN+++D + KV+DFG AK R + + L GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK---RVKGRTW-XLCGTPEYLA 207
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMME 714
PE I + ++ D ++ G+++ E+ G F ++ S K FPS+
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHF----- 262
Query: 715 EGKLRNILDSRLNID 729
L+++L + L +D
Sbjct: 263 SSDLKDLLRNLLQVD 277
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 29/216 (13%)
Query: 501 GQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAEGT 560
+G FG V++ L + +AVK Q K+ +++E I + H L+ AE
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPL--QDKQSWQSEREIFSTPGMKHENLLQFIAAEKR 80
Query: 561 HRLLAYE------FMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC---- 610
L E F GSL ++ K N ++ W ++A ++GL+YLHED
Sbjct: 81 GSNLEVELWLITAFHDKGSLTDYL-KGN---IITWNELCHVAETMSRGLSYLHEDVPWCR 136
Query: 611 ----DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR-GTRGYLAPEW 665
I H D K +NVLL + A ++DFGLA + T + GTR Y+APE
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE- 195
Query: 666 ITNYAIS------EKSDVYSYGMVLLEIIGGRKNFD 695
+ AI+ + D+Y+ G+VL E++ K D
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 102/253 (40%), Gaps = 41/253 (16%)
Query: 488 DLQTATNNFSVK--LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEV------- 538
D + N+F LG+G FG V L +K G K R EV
Sbjct: 4 DPKVTMNDFDYLKLLGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEV 54
Query: 539 -------SIIGSIHHLHLVKLRGFCAEGTHRLLAY--EFMANGSLDKWIFKKNQEFLLDW 589
++ + H L L+ A TH L + E+ G L F ++E +
Sbjct: 55 AHTVTESRVLQNTRHPFLTALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTE 109
Query: 590 ETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSH 649
E L YLH + +++ DIK EN++LD + H K++DFGL K + +
Sbjct: 110 ERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA- 165
Query: 650 VFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYA 709
GT YLAPE + + D + G+V+ E++ GR F ++ H +
Sbjct: 166 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHERLFE 220
Query: 710 FKMMEEGKLRNIL 722
+MEE + L
Sbjct: 221 LILMEEIRFPRTL 233
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 103/238 (43%), Gaps = 26/238 (10%)
Query: 471 DNFLENLSGMPVRFTYRDLQTATNNFSVK--LGQGGFGSVYQGVLPDGTR--LAVKKLEG 526
DNFL + + R LQ ++ V +G+G FG V Q V ++ A+K L
Sbjct: 54 DNFLNRYEKIVKKI--RGLQMKAEDYDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSK 110
Query: 527 IGQGKKE----FRAEVSIIGSIHHLHLVKLRGFCA--EGTHRLLAYEFMANGSLDKWIFK 580
K+ F E I+ + +V+L FCA + + + E+M G L +
Sbjct: 111 FEMIKRSDSAFFWEERDIMAFANSPWVVQL--FCAFQDDKYLYMVMEYMPGGDLVNLM-- 166
Query: 581 KNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLA 640
N + W + TA+ + L +IH D+KP+N+LLD + H K++DFG
Sbjct: 167 SNYDVPEKWAKFY-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC 221
Query: 641 KLMTREQSHVFTTLRGTRGYLAPEWITNYA----ISEKSDVYSYGMVLLEIIGGRKNF 694
M T GT Y++PE + + + D +S G+ L E++ G F
Sbjct: 222 MKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 25/216 (11%)
Query: 499 KLGQGGFGSVYQGVLPDGTRL-AVKKL------EGIGQGKKEFRAEVSIIGSIHHLHLVK 551
K+G+G +G+V++ + + A+K++ EG+ E+ ++ + H ++V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIVR 65
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
L L +EF + L K+ N + LD E + KGL + H
Sbjct: 66 LHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHS--- 119
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWITN 668
+ ++H D+KP+N+L++ N K+++FGLA+ + R S TL Y P+ +
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL----WYRPPDVLFG 175
Query: 669 YAISEKS-DVYSYGMVLLEII-GGRKNFDPNETSDK 702
+ S D++S G + E+ GR F N+ D+
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 31/170 (18%)
Query: 552 LRGFCAEGTHRLLAYEF-MANGSLDKWIFKKN-QEFLLDWETRFN-IAL--GTAKGLAYL 606
+R +C+E T R L + N +L + KN + L + +N I+L A G+A+L
Sbjct: 72 IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 607 HEDCDQRIIHCDIKPENVLLD-------------DNYHAKVSDFGLAKLMTREQSHVFTT 653
H +IIH D+KP+N+L+ +N +SDFGL K + QS T
Sbjct: 132 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 654 LR---GTRGYLAPEWI-------TNYAISEKSDVYSYGMVLLEIIGGRKN 693
L GT G+ APE + T ++ D++S G V I+ K+
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 12/161 (7%)
Query: 537 EVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIA 596
EV+++ + H +++KL F + + L E G L I + + +D
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 130
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTT 653
L G YLH+ I+H D+KPEN+LL+ K+ DFGL+ E
Sbjct: 131 LS---GTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKE 182
Query: 654 LRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF 694
GT Y+APE + EK DV+S G++L ++ G F
Sbjct: 183 RLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 25/216 (11%)
Query: 499 KLGQGGFGSVYQGVLPDGTRL-AVKKL------EGIGQGKKEFRAEVSIIGSIHHLHLVK 551
K+G+G +G+V++ + + A+K++ EG+ E+ ++ + H ++V+
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR---EICLLKELKHKNIVR 65
Query: 552 LRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
L L +EF + L K+ N + LD E + KGL + H
Sbjct: 66 LHDVLHSDKKLTLVFEF-CDQDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHS--- 119
Query: 612 QRIIHCDIKPENVLLDDNYHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWITN 668
+ ++H D+KP+N+L++ N K++DFGLA+ + R S TL Y P+ +
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTL----WYRPPDVLFG 175
Query: 669 YAISEKS-DVYSYGMVLLEII-GGRKNFDPNETSDK 702
+ S D++S G + E+ R F N+ D+
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQ 211
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 121/285 (42%), Gaps = 42/285 (14%)
Query: 495 NFSVKLGQGGFGSVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVK 551
NF KL + G +++G G + VK L + + ++F E + H +++
Sbjct: 13 NFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLP 71
Query: 552 LRGFC--AEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHED 609
+ G C H L +M GSL + + F++D AL A+G+A+LH
Sbjct: 72 VLGACQSPPAPHPTLITHWMPYGSLYN-VLHEGTNFVVDQSQAVKFALDMARGMAFLHT- 129
Query: 610 CDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNY 669
+ I + +V++D++ A++S + V + + AP W+
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARIS-----------MADVKFSFQSPGRMYAPAWVAPE 178
Query: 670 AISEK--------SDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNI 721
A+ +K +D++S+ ++L E++ F +D ++ K+ EG LR
Sbjct: 179 ALQKKPEDTNRRSADMWSFAVLLWELVTREVPF-----ADLSNM-EIGMKVALEG-LRPT 231
Query: 722 LDSRLNIDEQSDRVFTAVKVALWCVQEDMSLRPSMTKVVQMLEGI 766
+ + S V +K+ C+ ED + RP +V +LE +
Sbjct: 232 IPPGI-----SPHVSKLMKI---CMNEDPAKRPKFDMIVPILEKM 268
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
YLH +I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLA
Sbjct: 175 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLA 227
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMME 714
PE I + ++ D ++ G+++ E+ G F ++ S K FPS+ F
Sbjct: 228 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDL 286
Query: 715 EGKLRNILDSRL 726
+ LRN+L L
Sbjct: 287 KDLLRNLLQVDL 298
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 95
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++ G + + + + + RF A YLH
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 151
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 152 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILS 205
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 206 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 264
Query: 721 ILDSRL 726
+L L
Sbjct: 265 LLQVDL 270
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E++ G + + + + + RF A YLH
Sbjct: 105 KLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
YLH +I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLA 207
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMME 714
PE I + ++ D ++ G+++ E+ G F ++ S K FPS+ F
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDL 266
Query: 715 EGKLRNILDSRL 726
+ LRN+L L
Sbjct: 267 KDLLRNLLQVDL 278
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
YLH +I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLA 207
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMME 714
PE I + ++ D ++ G+++ E+ G F ++ S K FPS+ F
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDL 266
Query: 715 EGKLRNILDSRL 726
+ LRN+L L
Sbjct: 267 KDLLRNLLQVDL 278
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 39/239 (16%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEV--------------SIIGSIH 545
LG+G FG V L +K G K R EV ++ +
Sbjct: 13 LGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 546 HLHLVKLRGFCAEGTHRLLAY--EFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGL 603
H L L+ A TH L + E+ G L F ++E + E L
Sbjct: 64 HPFLTALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSAL 118
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAP 663
YLH + +++ DIK EN++LD + H K++DFGL K + + GT YLAP
Sbjct: 119 EYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAP 174
Query: 664 EWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNIL 722
E + + D + G+V+ E++ GR F ++ H + +MEE + L
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHERLFELILMEEIRFPRTL 228
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 26/130 (20%)
Query: 582 NQEFLLDWETR------------FNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDN 629
+E L DW R +I + A+ + +LH + ++H D+KP N+ +
Sbjct: 144 RKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMD 200
Query: 630 YHAKVSDFGLAKLMTR--EQSHVFTTLR---------GTRGYLAPEWITNYAISEKSDVY 678
KV DFGL M + E+ V T + GT+ Y++PE I S K D++
Sbjct: 201 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIF 260
Query: 679 SYGMVLLEII 688
S G++L E++
Sbjct: 261 SLGLILFELL 270
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 16/132 (12%)
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
YLH +I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLA
Sbjct: 155 FEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLA 207
Query: 663 PEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMME 714
PE I + ++ D ++ G+++ E+ G F ++ S K FPS+ F
Sbjct: 208 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDL 266
Query: 715 EGKLRNILDSRL 726
+ LRN+L L
Sbjct: 267 KDLLRNLLQVDL 278
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
Query: 578 IFKKN--QEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHA--K 633
+ KKN Q F L +F A + L LH++ RIIHCD+KPEN+LL + K
Sbjct: 188 LIKKNKFQGFSLPLVRKF--AHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIK 242
Query: 634 VSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
V DFG + E V+T ++ +R Y APE I D++S G +L E++ G
Sbjct: 243 VIDFGSS---CYEHQRVYTXIQ-SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 39/239 (16%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEV--------------SIIGSIH 545
LG+G FG V L +K G K R EV ++ +
Sbjct: 13 LGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 546 HLHLVKLRGFCAEGTHRLLAY--EFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGL 603
H L L+ A TH L + E+ G L F ++E + E L
Sbjct: 64 HPFLTALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSAL 118
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAP 663
YLH + +++ DIK EN++LD + H K++DFGL K + + GT YLAP
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAP 174
Query: 664 EWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNIL 722
E + + D + G+V+ E++ GR F ++ H + +MEE + L
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHERLFELILMEEIRFPRTL 228
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 485 TYRDLQTATNNFSV--KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQG----KKEFRAE 537
T D Q N+ + +G+G F V + G +AVK ++ +K FR E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-E 63
Query: 538 VSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIAL 597
V I+ ++H ++VKL L E+ + G + ++ + + +F
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR--- 120
Query: 598 GTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT 657
+ Y H+ I+H D+K EN+LLD + + K++DFG + T + T G+
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDTFCGS 175
Query: 658 RGYLAPEWITNYAIS-EKSDVYSYGMVLLEIIGGRKNFD 695
Y APE + DV+S G++L ++ G FD
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 29/209 (13%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE- 558
+G+G +G V++G L G +AVK + ++ + E I ++ H + GF A
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSS--RDEQSWFRETEIYNTVLLRH-DNILGFIASD 71
Query: 559 ------GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC-- 610
T L + +GSL ++ ++ E L +A+ A GLA+LH +
Sbjct: 72 MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIFG 127
Query: 611 ---DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV---FTTLRGTRGYLAPE 664
I H D K NVL+ N ++D GLA + ++ ++ GT+ Y+APE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 665 WITN------YAISEKSDVYSYGMVLLEI 687
+ + + +D++++G+VL EI
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 485 TYRDLQTATNNFSV--KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQG----KKEFRAE 537
T D Q N+ + +G+G F V + G +AVK ++ +K FR E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-E 63
Query: 538 VSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIAL 597
V I+ ++H ++VKL L E+ + G + ++ + + +F
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR--- 120
Query: 598 GTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT 657
+ Y H+ I+H D+K EN+LLD + + K++DFG + T + T G+
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDTFCGS 175
Query: 658 RGYLAPEWITNYAIS-EKSDVYSYGMVLLEIIGGRKNFD 695
Y APE + DV+S G++L ++ G FD
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT YLAP I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPAIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
Query: 578 IFKKN--QEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHA--K 633
+ KKN Q F L +F A + L LH++ RIIHCD+KPEN+LL + K
Sbjct: 188 LIKKNKFQGFSLPLVRKF--AHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIK 242
Query: 634 VSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
V DFG + E V+T ++ +R Y APE I D++S G +L E++ G
Sbjct: 243 VIDFGSS---CYEHQRVYTXIQ-SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 97/239 (40%), Gaps = 39/239 (16%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEV--------------SIIGSIH 545
LG+G FG V L +K G K R EV ++ +
Sbjct: 13 LGKGTFGKVI---------LVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 546 HLHLVKLRGFCAEGTHRLLAY--EFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGL 603
H L L+ A TH L + E+ G L F ++E + E L
Sbjct: 64 HPFLTALK--YAFQTHDRLCFVMEYANGGEL---FFHLSRERVFTEERARFYGAEIVSAL 118
Query: 604 AYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAP 663
YLH + +++ DIK EN++LD + H K++DFGL K + + GT YLAP
Sbjct: 119 EYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-TMKXFCGTPEYLAP 174
Query: 664 EWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDKAHFPSYAFKMMEEGKLRNIL 722
E + + D + G+V+ E++ GR F ++ H + +MEE + L
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF-----YNQDHERLFELILMEEIRFPRTL 228
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 537 EVSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIA 596
EV+++ + H +++KL F + + L E G L I + + +D
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQV 113
Query: 597 LGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTT 653
L G YLH+ I+H D+KPEN+LL+ K+ DFGL+ E
Sbjct: 114 LS---GTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKE 165
Query: 654 LRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
GT Y+APE + EK DV+S G++L ++ G
Sbjct: 166 RLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 91/206 (44%), Gaps = 20/206 (9%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAV-----KKLEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+LG+G F V + V + G A KKL K E E I + H ++V+L
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLE--REARICRLLKHPNIVRL 75
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQ 612
+E H L ++ + G L + I + D L A LH C Q
Sbjct: 76 HDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILE-----AVLH--CHQ 128
Query: 613 R-IIHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
++H ++KPEN+LL K++DFGLA + EQ F GT GYL+PE +
Sbjct: 129 MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG-FAGTPGYLSPEVLRK 187
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNF 694
+ D+++ G++L ++ G F
Sbjct: 188 DPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 97
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 214
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 30/232 (12%)
Query: 494 NNFSVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQGK 531
N +SV++G F + YQ + P G+ +A+KKL + K
Sbjct: 3 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK 62
Query: 532 KEFRAEVSIIGSIHHLHLVKLRG-FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
+ +R E+ ++ ++H +++ L F + + ++ +D + + Q LD E
Sbjct: 63 RAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHE 120
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ G+ +LH IIH D+KP N+++ + K+ DFGLA+ T S +
Sbjct: 121 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFM 175
Query: 651 FTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
T TR Y APE I E D++S G ++ E++ + F + D+
Sbjct: 176 MTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 227
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 97
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 214
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 97
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGL------AYL 606
G RLL + + + + + L D+ T R + A+ A
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 607 H-EDCDQRIIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
H +C ++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PE
Sbjct: 158 HCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 212
Query: 665 WITNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
WI + +S V+S G++L +++ G F+ +E
Sbjct: 213 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 96
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 37/258 (14%)
Query: 487 RDLQTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKE-----FRAEVS 539
+++Q +F + +G+G FG V + + R+ K+ + K FR E
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNI---- 595
++ + + L + H L ++ G L + K ++ L + RF I
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMV 185
Query: 596 -ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL 654
A+ + L Y+H D IKP+NVLLD N H +++DFG M + + +
Sbjct: 186 LAIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 236
Query: 655 RGTRGYLAPEWITNYA-----ISEKSDVYSYGMVLLEIIGGRKNFDPN---ET------- 699
GT Y++PE + + D +S G+ + E++ G F ET
Sbjct: 237 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 296
Query: 700 SDKAHFPSYAFKMMEEGK 717
++ FPS+ + EE K
Sbjct: 297 EERFQFPSHVTDVSEEAK 314
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 69
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 186
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 103/232 (44%), Gaps = 30/232 (12%)
Query: 494 NNFSVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQGK 531
N +SV++G F + YQ + P G+ +A+KKL + K
Sbjct: 14 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK 73
Query: 532 KEFRAEVSIIGSIHHLHLVKLRG-FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
+ +R E+ ++ ++H +++ L F + + ++ +D + + Q LD E
Sbjct: 74 RAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHE 131
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ G+ +LH IIH D+KP N+++ + K+ DFGLA+ T S +
Sbjct: 132 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFM 186
Query: 651 FTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNETSDK 702
T TR Y APE I E D++S G ++ E++ + F + D+
Sbjct: 187 MTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 32/244 (13%)
Query: 500 LGQGGFGSVYQ-GVLPDGTRLAVK--------KLEGIGQGKKEFRAEVSIIGSIHHLHLV 550
LG G FG V + G A+K KL+ I E R I+ +++ LV
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKR----ILQAVNFPFLV 104
Query: 551 KLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC 610
KL + ++ + E+ G + + + + + RF A YLH
Sbjct: 105 KLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH--- 158
Query: 611 DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYA 670
+I+ D+KPEN+++D + +V+DFG AK R + + L GT YLAPE I +
Sbjct: 159 SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEYLAPEIILSKG 214
Query: 671 ISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRNIL 722
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN+L
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRNLL 273
Query: 723 DSRL 726
L
Sbjct: 274 QVDL 277
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 107/258 (41%), Gaps = 37/258 (14%)
Query: 487 RDLQTATNNFSV--KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKE-----FRAEVS 539
+++Q +F + +G+G FG V + + R+ K+ + K FR E
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 540 IIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNI---- 595
++ + + L + H L ++ G L + K ++ L + RF I
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMV 201
Query: 596 -ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTL 654
A+ + L Y+H D IKP+NVLLD N H +++DFG M + + +
Sbjct: 202 LAIDSIHQLHYVHRD---------IKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA 252
Query: 655 RGTRGYLAPEWITNYA-----ISEKSDVYSYGMVLLEIIGGRKNFDPN---ET------- 699
GT Y++PE + + D +S G+ + E++ G F ET
Sbjct: 253 VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNH 312
Query: 700 SDKAHFPSYAFKMMEEGK 717
++ FPS+ + EE K
Sbjct: 313 EERFQFPSHVTDVSEEAK 330
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 96
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 29/222 (13%)
Query: 496 FSVKLGQGGFGSV--YQGVLPDGTRLAVKK-LEGIGQGKKEFRAEVSIIGSIHHLHLVKL 552
F KLG+GGF V +G L DG A+K+ L Q ++E + E + +H ++++L
Sbjct: 33 FIQKLGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRL 91
Query: 553 RGFCAE---GTHR-LLAYEFMANGSLDKWIFK-KNQEFLLDWETRFNIALGTAKGLAYLH 607
+C H L F G+L I + K++ L + + LG +GL +H
Sbjct: 92 VAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 608 EDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV-----------FTTLRG 656
+ H D+KP N+LL D + D G M + HV + R
Sbjct: 152 A---KGYAHRDLKPTNILLGDEGQPVLMDLG---SMNQACIHVEGSRQALTLQDWAAQRC 205
Query: 657 TRGYLAPEWI---TNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
T Y APE ++ I E++DV+S G VL ++ G +D
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 83
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 144 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 200
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 233
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 84
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 145 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 201
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 96
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 97
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 98 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 157
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 158 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 214
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 247
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 104/245 (42%), Gaps = 50/245 (20%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRA---EVSIIGSIH-HLHLVKLRG 554
L +GGF VY+ + G A+K+L + +++ RA EV + + H ++V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRL--LSNEEEKNRAIIQEVCFMKKLSGHPNIVQ--- 90
Query: 555 FCAE----------GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLA 604
FC+ G L + G L +++ K L +T I T + +
Sbjct: 91 FCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 605 YLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR--------- 655
++H IIH D+K EN+LL + K+ DFG A ++ + ++ R
Sbjct: 151 HMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT 209
Query: 656 --GTRGYLAPEWI---TNYAISEKSDVYSYGMVL---------------LEIIGGRKNFD 695
T Y PE I +N+ I EK D+++ G +L L I+ G+ +
Sbjct: 210 RNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIP 269
Query: 696 PNETS 700
P++T
Sbjct: 270 PHDTQ 274
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 96
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 97 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 156
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 157 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 213
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 246
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 112/256 (43%), Gaps = 57/256 (22%)
Query: 494 NNFSVK--LGQGGFGSVYQGVLPDGTR-LAVKKL----EGIGQGKKEFRAEVSIIGSIHH 546
+N+ +K +G+G +G VY + + +A+KK+ E + K+ R E++I+ +
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKS 86
Query: 547 LHLVKLRGFCAEGTHRLLAYEFM------ANGSLDKWIFKKNQEFLLDWETR---FNIAL 597
++++L LL ++ + A+ L K K FL + + +N+ L
Sbjct: 87 DYIIRLHDLIIPED--LLKFDELYIVLEIADSDLKKLF--KTPIFLTEQHVKTILYNLLL 142
Query: 598 GTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQS-HVFTTLRG 656
G ++HE IIH D+KP N LL+ + K+ DFGLA+ + ++ H+ L
Sbjct: 143 GEK----FIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEE 195
Query: 657 -----------------------TRGYLAPEWI---TNYAISEKSDVYSYGMVLLEIIGG 690
TR Y APE I NY S D++S G + E++
Sbjct: 196 KEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNS--IDIWSTGCIFAELLNM 253
Query: 691 RKNFDPNETSDKAHFP 706
K+ N T+ FP
Sbjct: 254 MKSHINNPTNRFPLFP 269
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 15/214 (7%)
Query: 488 DLQTATNNFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQG----KKEFRAEVSIIG 542
DL +G+G F V + G +AVK ++ +K FR EV I+
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMK 61
Query: 543 SIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
++H ++VKL L E+ + G + ++ ++ + E R
Sbjct: 62 VLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG--WMKEKEARAKFR-QIVSA 118
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLA 662
+ Y H+ + I+H D+K EN+LLD + + K++DFG + T + T G+ Y A
Sbjct: 119 VQYCHQ---KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDTFCGSPPYAA 173
Query: 663 PEWITNYAIS-EKSDVYSYGMVLLEIIGGRKNFD 695
PE + DV+S G++L ++ G FD
Sbjct: 174 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 111
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 228
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 111
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 112 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 171
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 172 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 228
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 103
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGL------AYL 606
G RLL + + + + + L D+ T R + A+ A
Sbjct: 104 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 163
Query: 607 H-EDCDQRIIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
H +C ++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PE
Sbjct: 164 HCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 218
Query: 665 WITNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
WI + +S V+S G++L +++ G F+ +E
Sbjct: 219 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 253
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 14/183 (7%)
Query: 527 IGQGKKEFRAEVSIIGSI-HHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEF 585
I + K++ E+ I+ H +++ L+ +G + + E G L I + Q+F
Sbjct: 55 IDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILR--QKF 112
Query: 586 LLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDN----YHAKVSDFGLAK 641
+ E + K + YLH Q ++H D+KP N+L D ++ DFG AK
Sbjct: 113 FSEREAS-AVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Query: 642 LMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNF--DPNET 699
+ R ++ + T T ++APE + D++S G++L + G F P++T
Sbjct: 169 QL-RAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDT 227
Query: 700 SDK 702
++
Sbjct: 228 PEE 230
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 84
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGL------AYL 606
G RLL + + + + + L D+ T R + A+ A
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 607 H-EDCDQRIIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
H +C ++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PE
Sbjct: 145 HCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 199
Query: 665 WITNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
WI + +S V+S G++L +++ G F+ +E
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIA----LGTAKGLAYLHED 609
G RLL + F++ F+L E + T +G L E+
Sbjct: 69 SSGFSGVIRLLDW------------FERPDSFVLILERMEPVQDLFDFITERGA--LQEE 114
Query: 610 CDQR----------------IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFT 652
+ ++H DIK EN+L+D N K+ DFG L+ + V+T
Sbjct: 115 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 171
Query: 653 TLRGTRGYLAPEWITNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
GTR Y PEWI + +S V+S G++L +++ G F+ +E
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 218
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 83
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGL------AYL 606
G RLL + + + + + L D+ T R + A+ A
Sbjct: 84 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 143
Query: 607 H-EDCDQRIIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
H +C ++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PE
Sbjct: 144 HCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 198
Query: 665 WITNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
WI + +S V+S G++L +++ G F+ +E
Sbjct: 199 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 233
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 488 DLQTATNNFSV--KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQG----KKEFRAEVSI 540
D Q N+ + +G+G F V + G +A+K ++ +K FR EV I
Sbjct: 9 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRI 67
Query: 541 IGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTA 600
+ ++H ++VKL L E+ + G + ++ + + ++F
Sbjct: 68 MKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIV 124
Query: 601 KGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGY 660
+ Y H+ +RI+H D+K EN+LLD + + K++DFG + T G Y
Sbjct: 125 SAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFT--VGGKLDAFCGAPPY 179
Query: 661 LAPEWITNYAIS-EKSDVYSYGMVLLEIIGGRKNFD 695
APE + DV+S G++L ++ G FD
Sbjct: 180 AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 68
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 128
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 129 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 185
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 218
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 116
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGL------AYL 606
G RLL + + + + + L D+ T R + A+ A
Sbjct: 117 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 176
Query: 607 H-EDCDQRIIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
H +C ++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PE
Sbjct: 177 HCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 231
Query: 665 WITNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
WI + +S V+S G++L +++ G F+ +E
Sbjct: 232 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 266
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 97/225 (43%), Gaps = 48/225 (21%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 64
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIA----LGTAKG------- 602
G RLL + F++ F+L E + T +G
Sbjct: 65 SSGFSGVIRLLDW------------FERPDSFVLILERPEPVQDLFDFITERGALQEELA 112
Query: 603 -------LAYLHEDCDQRIIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTL 654
L + + ++H DIK EN+L+D N K+ DFG L+ + V+T
Sbjct: 113 RSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDF 169
Query: 655 RGTRGYLAPEWITNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
GTR Y PEWI + +S V+S G++L +++ G F+ +E
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 69
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGLAYLHEDCDQ 612
G RLL + + + + + L D+ T R + A+ + + +
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 129
Query: 613 R-----IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWI 666
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI
Sbjct: 130 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWI 186
Query: 667 TNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+ +S V+S G++L +++ G F+ +E
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 28/215 (13%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 84
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWET-RFNIALGTAKGL------AYL 606
G RLL + + + + + L D+ T R + A+ A
Sbjct: 85 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVR 144
Query: 607 H-EDCDQRIIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPE 664
H +C ++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PE
Sbjct: 145 HCHNCG--VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPE 199
Query: 665 WITNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
WI + +S V+S G++L +++ G F+ +E
Sbjct: 200 WIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLEGI---GQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
+G+G F V + V L G A K + + ++ E I + H ++V+L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQR-I 614
+E L ++ + G L + I + D L A LH C Q +
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILE-----AVLH--CHQMGV 124
Query: 615 IHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
+H D+KPEN+LL K++DFGLA + +Q F GT GYL+PE + A
Sbjct: 125 VHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG-FAGTPGYLSPEVLRKEAY 183
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF 694
+ D+++ G++L ++ G F
Sbjct: 184 GKPVDIWACGVILYILLVGYPPF 206
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLE------GIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+G+G F V + + + G + AVK ++ G ++ + E SI + H H+V+L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKK-NQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
+ + +EFM L I K+ + F+ + + L Y H D
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 150
Query: 612 QRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
IIH D+KP VLL +++ K+ FG+A + E V GT ++APE +
Sbjct: 151 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGTPHFMAPEVVKR 209
Query: 669 YAISEKSDVYSYGMVLLEIIGG 690
+ DV+ G++L ++ G
Sbjct: 210 EPYGKPVDVWGCGVILFILLSG 231
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 36/246 (14%)
Query: 500 LGQGGFGSV-----------YQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLH 548
LG G FG V Y + D + V KL+ I E R I+ +++
Sbjct: 49 LGTGSFGRVMLVKHKESGNHYAMKILDKQK--VVKLKQIEHTLNEKR----ILQAVNFPF 102
Query: 549 LVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHE 608
LVKL + ++ + E++A G + + + + + RF A YLH
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARF-YAAQIVLTFEYLH- 158
Query: 609 DCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
+I+ D+KPEN+L+D + +V+DFG AK R + + L GT LAPE I +
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK---RVKGRTW-XLCGTPEALAPEIILS 212
Query: 669 YAISEKSDVYSYGMVLLEIIGGRKNFDPNE--------TSDKAHFPSYAFKMMEEGKLRN 720
++ D ++ G+++ E+ G F ++ S K FPS+ F + LRN
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH-FSSDLKDLLRN 271
Query: 721 ILDSRL 726
+L L
Sbjct: 272 LLQVDL 277
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 17/219 (7%)
Query: 485 TYRDLQTATNNFSV--KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQG----KKEFRAE 537
T D Q N+ + +G+G F V + G +AV+ ++ +K FR E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-E 63
Query: 538 VSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIAL 597
V I+ ++H ++VKL L E+ + G + ++ + + +F
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR--- 120
Query: 598 GTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT 657
+ Y H+ I+H D+K EN+LLD + + K++DFG + T + T G+
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDTFCGS 175
Query: 658 RGYLAPEWITNYAIS-EKSDVYSYGMVLLEIIGGRKNFD 695
Y APE + DV+S G++L ++ G FD
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 52/227 (22%)
Query: 500 LGQGGFGSVYQGV-LPDGTRLAVKKLE-----GIGQGKKEFRAEVSIIGSIHHLHLVKLR 553
LG GGFGSVY G+ + D +A+K +E G+ R + ++ L+K
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-------LLKKV 69
Query: 554 GFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIA----LGTAKGLAYLHED 609
G RLL + F++ F+L E + T +G L E+
Sbjct: 70 SSGFSGVIRLLDW------------FERPDSFVLILERPEPVQDLFDFITERGA--LQEE 115
Query: 610 CDQR----------------IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFT 652
+ ++H DIK EN+L+D N K+ DFG L+ + V+T
Sbjct: 116 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYT 172
Query: 653 TLRGTRGYLAPEWITNYAISEKS-DVYSYGMVLLEIIGGRKNFDPNE 698
GTR Y PEWI + +S V+S G++L +++ G F+ +E
Sbjct: 173 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 219
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
++G+G +G V+ G G ++AVK + E+ + H +++ GF A
Sbjct: 44 QIGKGRYGEVWMGKW-RGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENIL---GFIAA 99
Query: 559 G-------THRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDC- 610
T L ++ NGSL ++ + LD ++ +A + GL +LH +
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 611 ----DQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT---TLRGTRGYLAP 663
I H D+K +N+L+ N ++D GLA + + V T GT+ Y+ P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 664 EWI------TNYAISEKSDVYSYGMVLLEI 687
E + ++ +D+YS+G++L E+
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 614 IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAIS 672
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 673 EKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+S V+S G++L +++ G F+ +E
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFEHDE 261
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGI---GQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+LG+G F V + + +P G A K + + ++ E I + H ++V+L
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E L ++ + G L + I + E+ + + I + + + H + I
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAR--EYYSEADASHCIQ-QILESVNHCHLNG---I 124
Query: 615 IHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
+H D+KPEN+LL K++DFGLA + +Q F GT GYL+PE +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-FAGTPGYLSPEVLRKDPY 183
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF 694
+ D+++ G++L ++ G F
Sbjct: 184 GKPVDMWACGVILYILLVGYPPF 206
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 614 IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAIS 672
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 214
Query: 673 EKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+S V+S G++L +++ G F+ +E
Sbjct: 215 GRSAAVWSLGILLYDMVCGDIPFEHDE 241
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 500 LGQGGFGSVYQGVLPD-GTRLAVKKLE------GIGQGKKEFRAEVSIIGSIHHLHLVKL 552
+G+G F V + + + G + AVK ++ G ++ + E SI + H H+V+L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 553 RGFCAEGTHRLLAYEFMANGSLDKWIFKK-NQEFLLDWETRFNIALGTAKGLAYLHEDCD 611
+ + +EFM L I K+ + F+ + + L Y H D
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---D 148
Query: 612 QRIIHCDIKPENVLL---DDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITN 668
IIH D+KP VLL +++ K+ FG+A + E V GT ++APE +
Sbjct: 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVAGGRVGTPHFMAPEVVKR 207
Query: 669 YAISEKSDVYSYGMVLLEIIGG 690
+ DV+ G++L ++ G
Sbjct: 208 EPYGKPVDVWGCGVILFILLSG 229
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 614 IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAIS 672
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 673 EKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+S V+S G++L +++ G F+ +E
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 614 IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAIS 672
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 190
Query: 673 EKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+S V+S G++L +++ G F+ +E
Sbjct: 191 GRSAAVWSLGILLYDMVCGDIPFEHDE 217
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 58/244 (23%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKKLEGIGQGK---------KEFRAEVSIIGSIHHLHLV 550
+GQG +G V + + + TR A++ ++ + + K + + EV ++ +HH ++
Sbjct: 34 IGQGSYG-VVRVAIENQTR-AIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIA 91
Query: 551 KLRGFCAEGTHRLLAYEFMANGSL-DKWI------------------------------- 578
+L + + L E G L DK
Sbjct: 92 RLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAIN 151
Query: 579 -----FKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDN--YH 631
F+++ +F+ + NI L YLH +Q I H DIKPEN L N +
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFE 208
Query: 632 AKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWI--TNYAISEKSDVYSYGMVLLE 686
K+ DFGL+K + + + TT GT ++APE + TN + K D +S G++L
Sbjct: 209 IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHL 268
Query: 687 IIGG 690
++ G
Sbjct: 269 LLMG 272
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 5/87 (5%)
Query: 614 IIHCDIKPENVLLDDNY-HAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAIS 672
++H DIK EN+L+D N K+ DFG L+ + V+T GTR Y PEWI +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALL---KDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 673 EKS-DVYSYGMVLLEIIGGRKNFDPNE 698
+S V+S G++L +++ G F+ +E
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPFEHDE 214
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 552 LRGFCAEGTHRLLAYEF-MANGSLDKWIFKKN-QEFLLDWETRFN---IALGTAKGLAYL 606
+R +C+E T R L + N +L + KN + L + +N + A G+A+L
Sbjct: 90 IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 607 HEDCDQRIIHCDIKPENVLLD-------------DNYHAKVSDFGLAKLMTREQSHVFTT 653
H +IIH D+KP+N+L+ +N +SDFGL K + Q
Sbjct: 150 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 654 LR---GTRGYLAPEWI---TNYAISEKSDVYSYGMVLLEIIGGRKN 693
L GT G+ APE + T ++ D++S G V I+ K+
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 552 LRGFCAEGTHRLLAYEF-MANGSLDKWIFKKN-QEFLLDWETRFN---IALGTAKGLAYL 606
+R +C+E T R L + N +L + KN + L + +N + A G+A+L
Sbjct: 90 IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 607 HEDCDQRIIHCDIKPENVLLD-------------DNYHAKVSDFGLAKLMTREQSHVFTT 653
H +IIH D+KP+N+L+ +N +SDFGL K + Q
Sbjct: 150 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 654 LR---GTRGYLAPEWI---TNYAISEKSDVYSYGMVLLEIIGGRKN 693
L GT G+ APE + T ++ D++S G V I+ K+
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH 252
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 60/117 (51%), Gaps = 13/117 (11%)
Query: 578 IFKKN--QEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHA--K 633
+ KKN Q F L +F A + L LH++ RIIHCD+KPEN+LL + K
Sbjct: 188 LIKKNKFQGFSLPLVRKF--AHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIK 242
Query: 634 VSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGG 690
V DFG + E V+ ++ +R Y APE I D++S G +L E++ G
Sbjct: 243 VIDFGSS---CYEHQRVYXXIQ-SRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 14/203 (6%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGI---GQGKKEFRAEVSIIGSIHHLHLVKLRG 554
+LG+G F V + + +P G A K + + ++ E I + H ++V+L
Sbjct: 11 ELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 70
Query: 555 FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
+E L ++ + G L + I + ++ + + + + L ++ I
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAR------EYYSEADASHCIQQILESVNHCHLNGI 124
Query: 615 IHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAI 671
+H D+KPEN+LL K++DFGLA + +Q F GT GYL+PE +
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-FAGTPGYLSPEVLRKDPY 183
Query: 672 SEKSDVYSYGMVLLEIIGGRKNF 694
+ D+++ G++L ++ G F
Sbjct: 184 GKPVDMWACGVILYILLVGYPPF 206
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGT 657
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ +V R
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEI 293
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL 586
L G C + G ++ EF G+L ++ K EF+
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGT 657
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ +V R
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEI 286
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 28 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 87
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL 586
L G C + G ++ EF G+L ++ K EF+
Sbjct: 88 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 124
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGT 657
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ +V R
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEI 295
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL 586
L G C + G ++ EF G+L ++ K EF+
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 133
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 599 TAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFT-TLRGT 657
AKG+ +L ++ IH D+ N+LL + K+ DFGLA+ + ++ +V R
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 658 RGYLAPEWITNYAISEKSDVYSYGMVLLEI 687
++APE I + + +SDV+S+G++L EI
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEI 288
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 10/97 (10%)
Query: 500 LGQGGFGSVYQ----GVLPDGT-RLAVKKLEGIGQGKKEFRA---EVSIIGSI-HHLHLV 550
LG+G FG V + G+ T R K+ G E RA E+ I+ I HHL++V
Sbjct: 30 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89
Query: 551 KLRGFCAE-GTHRLLAYEFMANGSLDKWIFKKNQEFL 586
L G C + G ++ EF G+L ++ K EF+
Sbjct: 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 126
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G GG V+Q + A+K + E Q +R E++ + + +R +
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
E T + + Y M G++D + K ++ + WE R + + + +H+ I+
Sbjct: 123 DYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ---HGIV 177
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR-GTRGYLAPEWITNYAISEK 674
H D+KP N L+ D K+ DFG+A M + + V + GT Y+ PE I + + S +
Sbjct: 178 HSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 236
Query: 675 S-----------DVYSYGMVLLEIIGGRKNF 694
+ DV+S G +L + G+ F
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 98/229 (42%), Gaps = 35/229 (15%)
Query: 500 LGQGGFGSVYQGVLPDGTRLAVKK------------LEGIGQGKKEFRAEVSIIGSIHHL 547
LG G FG V+ V + + V K +E GK E++I+ + H
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK--VTLEIAILSRVEHA 89
Query: 548 HLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGT------AK 601
+++K+ L E +G LD + F +D R + L +
Sbjct: 90 NIIKVLDIFENQGFFQLVMEKHGSG-LDLFAF-------IDRHPRLDEPLASYIFRQLVS 141
Query: 602 GLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGTRGYL 661
+ YL + IIH DIK EN+++ +++ K+ DFG A + E+ +F T GT Y
Sbjct: 142 AVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKLFYTFCGTIEYC 196
Query: 662 APEWIT-NYAISEKSDVYSYGMVLLEIIGGRKNF-DPNETSDKAHFPSY 708
APE + N + +++S G+ L ++ F + ET + A P Y
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPY 245
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR 655
A A GL +L + II+ D+K +NV+LD H K++DFG+ K +
Sbjct: 448 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT-KXFC 503
Query: 656 GTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
GT Y+APE I + D +++G++L E++ G+ F+
Sbjct: 504 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 48/264 (18%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHL---------- 547
KLG G F +V+ + + T +A+K + G + E+ ++ ++
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 548 -HLVKLRGFCAE----GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
H++KL G H ++ +E + L + KK + + I+ G
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLA--LIKKYEHRGIPLIYVKQISKQLLLG 143
Query: 603 LAYLHEDCDQRIIHCDIKPENVLL------DDNYHAKVSDFGLAKLMTREQSHVFTTLRG 656
L Y+H C IIH DIKPENVL+ ++ K++D G A +T
Sbjct: 144 LDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQ 197
Query: 657 TRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE----TSDKAH-------- 704
TR Y +PE + +D++S ++ E+I G F+P+E T D H
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 257
Query: 705 --FPSYAFKMMEEGKL-RNILDSR 725
PSY ++ GK R +SR
Sbjct: 258 GELPSY---LLRNGKYTRTFFNSR 278
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 17/219 (7%)
Query: 485 TYRDLQTATNNFSV--KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQG----KKEFRAE 537
T D Q N+ + +G+G F V + G +AVK ++ +K FR E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-E 63
Query: 538 VSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIAL 597
V I+ ++H ++VKL L E+ + G + ++ + + +F
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR--- 120
Query: 598 GTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT 657
+ Y H+ I+H D+K EN+LLD + + K++DFG + T + G
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDAFCGA 175
Query: 658 RGYLAPEWITNYAIS-EKSDVYSYGMVLLEIIGGRKNFD 695
Y APE + DV+S G++L ++ G FD
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 109/264 (41%), Gaps = 48/264 (18%)
Query: 499 KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQGKKEFRAEVSIIGSIHHL---------- 547
KLG G F +V+ + + T +A+K + G + E+ ++ ++
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 548 -HLVKLRGFCAE----GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
H++KL G H ++ +E + L + KK + + I+ G
Sbjct: 86 NHILKLLDHFNHKGPNGVHVVMVFEVLGENLLA--LIKKYEHRGIPLIYVKQISKQLLLG 143
Query: 603 LAYLHEDCDQRIIHCDIKPENVLL------DDNYHAKVSDFGLAKLMTREQSHVFTTLRG 656
L Y+H C IIH DIKPENVL+ ++ K++D G A +T
Sbjct: 144 LDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQ 197
Query: 657 TRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFDPNE----TSDKAH-------- 704
TR Y +PE + +D++S ++ E+I G F+P+E T D H
Sbjct: 198 TREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL 257
Query: 705 --FPSYAFKMMEEGKL-RNILDSR 725
PSY ++ GK R +SR
Sbjct: 258 GELPSY---LLRNGKYTRTFFNSR 278
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 19/207 (9%)
Query: 500 LGQGGFGSVYQGVLPDGTRL-AVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+G G FG L AVK +E + + + E+ S+ H ++V+ +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
TH + E+ + G L + I N + E RF G++Y H ++ H D
Sbjct: 87 PTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQ-QLISGVSYAHA---MQVAHRD 140
Query: 619 IKPENVLLDDN--YHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWITNYAISE 673
+K EN LLD + K++DFG +K L ++ +S V GT Y+APE +
Sbjct: 141 LKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV-----GTPAYIAPEVLLKKEYDG 195
Query: 674 K-SDVYSYGMVLLEIIGGRKNF-DPNE 698
K +DV+S G+ L ++ G F DP E
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEE 222
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G GG V+Q + A+K + E Q +R E++ + + +R +
Sbjct: 19 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 78
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
E T + + Y M G++D + K ++ + WE R + + + +H+ I+
Sbjct: 79 DYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ---HGIV 133
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR-GTRGYLAPEWITNYAISEK 674
H D+KP N L+ D K+ DFG+A M + + V + GT Y+ PE I + + S +
Sbjct: 134 HSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 192
Query: 675 S-----------DVYSYGMVLLEIIGGRKNF 694
+ DV+S G +L + G+ F
Sbjct: 193 NGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 596 ALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR 655
A A GL +L + II+ D+K +NV+LD H K++DFG+ K +
Sbjct: 127 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT-KXFC 182
Query: 656 GTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNFD 695
GT Y+APE I + D +++G++L E++ G+ F+
Sbjct: 183 GTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 500 LGQGGFGS-VYQGVLPDGTRLAVKKL--EGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFC 556
LG G G+ VY+G+ D +AVK++ E +E + + S H +++ R FC
Sbjct: 32 LGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQL---LRESDEHPNVI--RYFC 85
Query: 557 AEGTHRL--LAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRI 614
E + +A E A +L +++ +K+ F + T GLA+LH I
Sbjct: 86 TEKDRQFQYIAIELCA-ATLQEYVEQKD--FAHLGLEPITLLQQTTSGLAHLH---SLNI 139
Query: 615 IHCDIKPENVLLD-DNYHAK----VSDFGLAKLMT--REQSHVFTTLRGTRGYLAPEWIT 667
+H D+KP N+L+ N H K +SDFGL K + R + + GT G++APE ++
Sbjct: 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLS 199
Query: 668 NYAISEKS---DVYSYGMVLLEII 688
+ D++S G V +I
Sbjct: 200 EDCKENPTYTVDIFSAGCVFYYVI 223
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G GG V+Q + A+K + E Q +R E++ + + +R +
Sbjct: 63 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 122
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
E T + + Y M G++D + K ++ + WE R + + + +H+ I+
Sbjct: 123 DYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ---HGIV 177
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR-GTRGYLAPEWITNYAISEK 674
H D+KP N L+ D K+ DFG+A M + + V + GT Y+ PE I + + S +
Sbjct: 178 HSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 236
Query: 675 S-----------DVYSYGMVLLEIIGGRKNF 694
+ DV+S G +L + G+ F
Sbjct: 237 NGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 26/226 (11%)
Query: 486 YRDLQTATNNFSVKLGQGGFGSVYQGV-LPDGTRLAVKKLEG-IGQGKKEFRAEVSIIGS 543
+ D+ T+ LG+G + V V L +G AVK +E G + EV +
Sbjct: 10 FEDMYKLTSEL---LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ 66
Query: 544 IH-HLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKG 602
+ ++++L F + T L +E + GS+ I +K + F +R + A
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI-QKQKHFNEREASR--VVRDVAAA 123
Query: 603 LAYLHEDCDQRIIHCDIKPENVLLDDNYH---AKVSDFGLAKLMTREQSHV------FTT 653
L +LH + I H D+KPEN+L + K+ DF L M S TT
Sbjct: 124 LDFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTT 180
Query: 654 LRGTRGYLAPEWITNYA-----ISEKSDVYSYGMVLLEIIGGRKNF 694
G+ Y+APE + + ++ D++S G+VL ++ G F
Sbjct: 181 PCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G GG V+Q + A+K + E Q +R E++ + + +R +
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
E T + + Y M G++D + K ++ + WE R + + + +H+ I+
Sbjct: 95 DYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ---HGIV 149
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR-GTRGYLAPEWITNYAISEK 674
H D+KP N L+ D K+ DFG+A M + + V + GT Y+ PE I + + S +
Sbjct: 150 HSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 208
Query: 675 S-----------DVYSYGMVLLEIIGGRKNF 694
+ DV+S G +L + G+ F
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 75/170 (44%), Gaps = 31/170 (18%)
Query: 552 LRGFCAEGTHRLLAYEF-MANGSLDKWIFKKN-QEFLLDWETRFN---IALGTAKGLAYL 606
+R +C+E T R L + N +L + KN + L + +N + A G+A+L
Sbjct: 72 IRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 607 HEDCDQRIIHCDIKPENVLLD-------------DNYHAKVSDFGLAKLMTREQSHVFTT 653
H +IIH D+KP+N+L+ +N +SDFGL K + Q
Sbjct: 132 HS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 188
Query: 654 LR---GTRGYLAPEWI-------TNYAISEKSDVYSYGMVLLEIIGGRKN 693
L GT G+ APE + T ++ D++S G V I+ K+
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH 238
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 17/219 (7%)
Query: 485 TYRDLQTATNNFSV--KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQG----KKEFRAE 537
T D Q N+ + +G+G F V + G +AV+ ++ +K FR E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-E 63
Query: 538 VSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIAL 597
V I+ ++H ++VKL L E+ + G + ++ + + +F
Sbjct: 64 VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR--- 120
Query: 598 GTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT 657
+ Y H+ I+H D+K EN+LLD + + K++DFG + T + G+
Sbjct: 121 QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTF--GNKLDEFCGS 175
Query: 658 RGYLAPEWITNYAIS-EKSDVYSYGMVLLEIIGGRKNFD 695
Y APE + DV+S G++L ++ G FD
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 500 LGQGGFGSVYQGVLPDGTRL-AVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+G G FG L AVK +E + + + E+ S+ H ++V+ +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
TH + E+ + G L + I N + E RF G++Y H ++ H D
Sbjct: 86 PTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQ-QLISGVSYCHA---MQVCHRD 139
Query: 619 IKPENVLLDDN--YHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWITNYAISE 673
+K EN LLD + K+ DFG +K L ++ +S V GT Y+APE +
Sbjct: 140 LKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-----GTPAYIAPEVLLKKEYDG 194
Query: 674 K-SDVYSYGMVLLEIIGGRKNF-DPNE 698
K +DV+S G+ L ++ G F DP E
Sbjct: 195 KVADVWSCGVTLYVMLVGAYPFEDPEE 221
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 94/219 (42%), Gaps = 17/219 (7%)
Query: 485 TYRDLQTATNNFSV--KLGQGGFGSVYQGV-LPDGTRLAVKKLEGIGQG----KKEFRAE 537
T D Q N+ + +G+G F V + G +AVK ++ +K FR E
Sbjct: 5 TSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-E 63
Query: 538 VSIIGSIHHLHLVKLRGFCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIAL 597
V I ++H ++VKL L E+ + G + ++ + + +F +
Sbjct: 64 VRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIV 123
Query: 598 GTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLRGT 657
+ Y H+ I+H D+K EN+LLD + + K++DFG + T + G
Sbjct: 124 SAVQ---YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTF--GNKLDAFCGA 175
Query: 658 RGYLAPEWITNYAIS-EKSDVYSYGMVLLEIIGGRKNFD 695
Y APE + DV+S G++L ++ G FD
Sbjct: 176 PPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G GG V+Q + A+K + E Q +R E++ + + +R +
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
E T + + Y M G++D + K ++ + WE R + + + +H+ I+
Sbjct: 76 DYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ---HGIV 130
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR-GTRGYLAPEWITNYAISEK 674
H D+KP N L+ D K+ DFG+A M + + V + GT Y+ PE I + + S +
Sbjct: 131 HSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 189
Query: 675 S-----------DVYSYGMVLLEIIGGRKNF 694
+ DV+S G +L + G+ F
Sbjct: 190 NGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 21/211 (9%)
Query: 499 KLGQGGFGSVYQGVLPDGTRLAVKKL---EGIGQGKKEFRAEVSIIGSIHHLHLVKLRGF 555
++G GG V+Q + A+K + E Q +R E++ + + +R +
Sbjct: 15 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 556 CAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRII 615
E T + + Y M G++D + K ++ + WE R + + + +H+ I+
Sbjct: 75 DYEITDQYI-YMVMECGNIDLNSWLKKKKSIDPWE-RKSYWKNMLEAVHTIHQ---HGIV 129
Query: 616 HCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHVFTTLR-GTRGYLAPEWITNYAISEK 674
H D+KP N L+ D K+ DFG+A M + + V + GT Y+ PE I + + S +
Sbjct: 130 HSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 188
Query: 675 S-----------DVYSYGMVLLEIIGGRKNF 694
+ DV+S G +L + G+ F
Sbjct: 189 NGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 30/218 (13%)
Query: 494 NNFSVKLGQGGFGSV--YQGVLPDGT----------------RLAVKKL----EGIGQGK 531
N +SV++G F + YQ + P G+ +A+KKL + K
Sbjct: 9 NFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAK 68
Query: 532 KEFRAEVSIIGSIHHLHLVKLRG-FCAEGTHRLLAYEFMANGSLDKWIFKKNQEFLLDWE 590
+ +R E+ ++ ++H +++ L F + + ++ +D + + Q LD E
Sbjct: 69 RAYR-ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ-MELDHE 126
Query: 591 TRFNIALGTAKGLAYLHEDCDQRIIHCDIKPENVLLDDNYHAKVSDFGLAKLMTREQSHV 650
+ G+ +LH IIH D+KP N+++ + K+ DFGLA+ T S +
Sbjct: 127 RMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFM 181
Query: 651 FTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEII 688
TR Y APE I E D++S G ++ E++
Sbjct: 182 MEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 19/207 (9%)
Query: 500 LGQGGFGSVYQGVLPDGTRL-AVKKLEGIGQGKKEFRAEVSIIGSIHHLHLVKLRGFCAE 558
+G G FG L AVK +E + + E+ S+ H ++V+ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 559 GTHRLLAYEFMANGSLDKWIFKKNQEFLLDWETRFNIALGTAKGLAYLHEDCDQRIIHCD 618
TH + E+ + G L + I N + E RF G++Y H ++ H D
Sbjct: 87 PTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQ-QLISGVSYCHA---MQVCHRD 140
Query: 619 IKPENVLLDDN--YHAKVSDFGLAK---LMTREQSHVFTTLRGTRGYLAPEWITNYAISE 673
+K EN LLD + K+ DFG +K L ++ +S V GT Y+APE +
Sbjct: 141 LKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTV-----GTPAYIAPEVLLKKEYDG 195
Query: 674 K-SDVYSYGMVLLEIIGGRKNF-DPNE 698
K +DV+S G+ L ++ G F DP E
Sbjct: 196 KVADVWSCGVTLYVMLVGAYPFEDPEE 222
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,161,565
Number of Sequences: 62578
Number of extensions: 1029089
Number of successful extensions: 4422
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 281
Number of HSP's that attempted gapping in prelim test: 2253
Number of HSP's gapped (non-prelim): 1229
length of query: 817
length of database: 14,973,337
effective HSP length: 107
effective length of query: 710
effective length of database: 8,277,491
effective search space: 5877018610
effective search space used: 5877018610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)