Query 036585
Match_columns 304
No_of_seqs 677 out of 1111
Neff 12.0
Searched_HMMs 29240
Date Mon Mar 25 05:07:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036585.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036585hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 2.4E-48 8.2E-53 319.0 37.1 271 11-287 101-409 (410)
2 2ynn_A Coatomer subunit beta'; 100.0 9.7E-47 3.3E-51 297.6 36.6 273 11-289 6-302 (304)
3 3ow8_A WD repeat-containing pr 100.0 5.3E-47 1.8E-51 301.0 34.2 268 15-288 29-320 (321)
4 1got_B GT-beta; complex (GTP-b 100.0 4.2E-46 1.4E-50 298.5 35.8 272 10-286 47-340 (340)
5 4gqb_B Methylosome protein 50; 100.0 2E-46 7E-51 299.8 32.1 239 19-292 86-334 (344)
6 2pbi_B Guanine nucleotide-bind 100.0 3.8E-45 1.3E-49 294.3 36.6 273 10-286 56-354 (354)
7 3iz6_a 40S ribosomal protein R 100.0 6.7E-46 2.3E-50 301.7 30.8 278 10-290 58-376 (380)
8 4ery_A WD repeat-containing pr 100.0 1.8E-44 6.1E-49 285.9 37.6 277 9-288 14-311 (312)
9 3frx_A Guanine nucleotide-bind 100.0 1.1E-44 3.7E-49 287.8 33.8 274 7-289 6-317 (319)
10 4g56_B MGC81050 protein; prote 100.0 3.3E-45 1.1E-49 294.9 29.5 265 18-290 45-344 (357)
11 1erj_A Transcriptional repress 100.0 3.5E-44 1.2E-48 292.8 35.4 263 20-289 69-389 (393)
12 2xzm_R RACK1; ribosome, transl 100.0 2.5E-44 8.6E-49 288.6 33.6 272 10-289 13-340 (343)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.4E-44 1.8E-48 286.8 34.8 277 10-291 7-337 (345)
14 4gqb_B Methylosome protein 50; 100.0 3.8E-45 1.3E-49 292.4 26.3 253 15-302 30-302 (344)
15 1nr0_A Actin interacting prote 100.0 1.8E-43 6.2E-48 304.0 36.2 280 14-298 143-579 (611)
16 2pm7_B Protein transport prote 100.0 5.9E-43 2E-47 275.0 31.6 244 14-290 5-286 (297)
17 1nr0_A Actin interacting prote 100.0 8.4E-43 2.9E-47 299.9 33.4 272 15-292 18-358 (611)
18 3zwl_B Eukaryotic translation 100.0 1.7E-41 5.7E-46 274.6 36.0 274 10-291 24-348 (369)
19 2hes_X YDR267CP; beta-propelle 100.0 2.2E-41 7.7E-46 269.9 32.9 276 10-289 6-328 (330)
20 2ynn_A Coatomer subunit beta'; 100.0 3.3E-41 1.1E-45 266.0 32.9 246 48-298 4-269 (304)
21 2ymu_A WD-40 repeat protein; u 100.0 5.4E-41 1.8E-45 287.3 35.2 284 9-302 7-306 (577)
22 2ymu_A WD-40 repeat protein; u 100.0 1.2E-40 4E-45 285.3 37.1 272 20-302 267-552 (577)
23 3ow8_A WD repeat-containing pr 100.0 4.1E-41 1.4E-45 267.1 31.8 249 48-302 23-293 (321)
24 4aow_A Guanine nucleotide-bind 100.0 1.4E-40 4.9E-45 266.4 34.7 271 11-289 31-337 (340)
25 3bg1_A Protein SEC13 homolog; 100.0 4.1E-42 1.4E-46 272.5 25.4 244 14-289 9-293 (316)
26 3dm0_A Maltose-binding peripla 100.0 5.8E-41 2E-45 292.7 32.9 269 12-288 376-692 (694)
27 1r5m_A SIR4-interacting protei 100.0 6.8E-41 2.3E-45 276.0 31.3 265 19-291 49-363 (425)
28 1sq9_A Antiviral protein SKI8; 100.0 5.3E-41 1.8E-45 274.6 29.8 271 11-289 9-395 (397)
29 1vyh_C Platelet-activating fac 100.0 5.6E-41 1.9E-45 275.3 29.3 246 50-301 101-382 (410)
30 2pm9_A Protein WEB1, protein t 100.0 3.7E-41 1.3E-45 277.1 27.6 267 18-290 70-415 (416)
31 1gxr_A ESG1, transducin-like e 100.0 1.1E-39 3.6E-44 260.9 34.8 259 20-287 56-335 (337)
32 3odt_A Protein DOA1; ubiquitin 100.0 1.9E-39 6.5E-44 256.9 35.5 271 9-293 9-300 (313)
33 3dwl_C Actin-related protein 2 100.0 2.7E-42 9.4E-47 280.4 19.6 238 18-288 14-280 (377)
34 3vl1_A 26S proteasome regulato 100.0 5.3E-40 1.8E-44 270.7 32.8 262 21-288 103-418 (420)
35 3jrp_A Fusion protein of prote 100.0 4E-40 1.4E-44 267.6 29.8 248 12-289 5-287 (379)
36 3f3f_A Nucleoporin SEH1; struc 100.0 7E-40 2.4E-44 262.9 30.7 256 14-290 7-338 (351)
37 3i2n_A WD repeat-containing pr 100.0 2E-40 6.9E-45 267.2 27.6 268 19-289 22-353 (357)
38 3mmy_A MRNA export factor; mRN 100.0 1.1E-39 3.6E-44 264.0 31.2 263 12-281 33-336 (368)
39 3vl1_A 26S proteasome regulato 100.0 4.4E-40 1.5E-44 271.1 29.5 247 20-299 61-334 (420)
40 1got_B GT-beta; complex (GTP-b 100.0 2.3E-39 7.7E-44 259.5 32.3 249 47-301 45-314 (340)
41 3k26_A Polycomb protein EED; W 100.0 1.5E-39 5.1E-44 263.0 31.4 261 20-288 23-365 (366)
42 4gga_A P55CDC, cell division c 100.0 1E-38 3.5E-43 262.9 36.4 259 19-288 109-394 (420)
43 3v7d_B Cell division control p 100.0 4.6E-39 1.6E-43 268.4 34.3 273 10-292 113-424 (464)
44 1k8k_C P40, ARP2/3 complex 41 100.0 9.9E-40 3.4E-44 264.7 29.4 241 18-289 11-274 (372)
45 3ei3_B DNA damage-binding prot 100.0 6.2E-39 2.1E-43 261.2 32.2 270 13-289 68-382 (383)
46 1r5m_A SIR4-interacting protei 100.0 4E-39 1.4E-43 265.4 31.3 262 18-288 111-424 (425)
47 3dw8_B Serine/threonine-protei 100.0 2E-39 6.9E-44 269.2 29.0 251 17-297 30-381 (447)
48 2pm9_A Protein WEB1, protein t 100.0 7.8E-40 2.7E-44 269.2 25.7 268 18-291 15-339 (416)
49 3mkq_A Coatomer beta'-subunit; 100.0 2.3E-38 7.9E-43 281.2 36.9 273 11-289 6-302 (814)
50 2j04_B YDR362CP, TAU91; beta p 100.0 2.8E-40 9.4E-45 276.9 23.0 235 26-293 172-432 (524)
51 4aez_A CDC20, WD repeat-contai 100.0 1.2E-38 4.3E-43 260.9 31.9 235 19-291 138-382 (401)
52 1yfq_A Cell cycle arrest prote 100.0 2.9E-39 1E-43 259.1 27.6 257 19-282 15-314 (342)
53 4h5i_A Guanine nucleotide-exch 100.0 4.7E-39 1.6E-43 259.7 28.8 276 12-289 11-343 (365)
54 3sfz_A APAF-1, apoptotic pepti 100.0 1.5E-38 5.2E-43 293.8 35.8 284 11-300 608-1045(1249)
55 2j04_B YDR362CP, TAU91; beta p 100.0 3.1E-39 1.1E-43 270.5 26.9 239 19-291 211-519 (524)
56 3iz6_a 40S ribosomal protein R 100.0 5.9E-39 2E-43 260.8 27.4 249 37-291 46-331 (380)
57 3frx_A Guanine nucleotide-bind 100.0 3.8E-38 1.3E-42 250.1 31.1 238 47-291 7-269 (319)
58 4ggc_A P55CDC, cell division c 100.0 3.9E-37 1.3E-41 244.2 36.7 259 19-288 29-314 (318)
59 1pgu_A Actin interacting prote 100.0 5.5E-38 1.9E-42 270.5 33.6 263 19-289 164-614 (615)
60 4e54_B DNA damage-binding prot 100.0 1.3E-38 4.4E-43 263.4 28.1 270 19-292 123-433 (435)
61 1gxr_A ESG1, transducin-like e 100.0 9.3E-38 3.2E-42 249.6 32.0 267 18-293 12-300 (337)
62 2aq5_A Coronin-1A; WD40 repeat 100.0 1.9E-38 6.3E-43 260.0 26.9 247 13-292 76-345 (402)
63 4gq1_A NUP37; propeller, trans 100.0 1.1E-38 3.6E-43 260.3 25.2 258 23-287 97-387 (393)
64 4ery_A WD repeat-containing pr 100.0 1.3E-37 4.6E-42 246.4 30.4 218 47-299 13-234 (312)
65 2pbi_B Guanine nucleotide-bind 100.0 2.1E-37 7.3E-42 249.2 31.6 248 48-301 55-328 (354)
66 2xzm_R RACK1; ribosome, transl 100.0 5.6E-37 1.9E-41 245.9 33.6 236 48-291 12-287 (343)
67 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.8E-38 1.7E-42 252.2 27.3 211 47-287 5-223 (345)
68 3jro_A Fusion protein of prote 100.0 3.3E-38 1.1E-42 277.0 28.4 244 13-289 4-285 (753)
69 2xyi_A Probable histone-bindin 100.0 1.3E-37 4.5E-42 256.9 30.0 242 19-292 132-413 (430)
70 4g56_B MGC81050 protein; prote 100.0 6.6E-38 2.2E-42 252.3 27.0 226 19-252 98-346 (357)
71 1p22_A F-BOX/WD-repeat protein 100.0 1.8E-37 6.1E-42 256.6 30.3 256 20-291 136-416 (435)
72 3gre_A Serine/threonine-protei 100.0 1.1E-37 3.6E-42 258.2 27.7 271 11-286 55-437 (437)
73 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.6E-36 1.6E-40 249.0 36.4 265 11-291 111-393 (445)
74 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-37 5.2E-42 254.6 27.2 241 19-291 38-301 (402)
75 1k8k_C P40, ARP2/3 complex 41 100.0 3.4E-37 1.2E-41 249.8 28.9 262 10-289 44-361 (372)
76 2oaj_A Protein SNI1; WD40 repe 100.0 7.3E-38 2.5E-42 278.6 27.2 270 18-292 101-608 (902)
77 1erj_A Transcriptional repress 100.0 5.8E-37 2E-41 250.2 30.1 225 19-250 127-390 (393)
78 4a11_B DNA excision repair pro 100.0 6.7E-37 2.3E-41 250.9 30.7 278 11-292 36-368 (408)
79 3lrv_A PRE-mRNA-splicing facto 100.0 4.5E-38 1.5E-42 252.3 23.1 229 22-289 43-292 (343)
80 4aez_A CDC20, WD repeat-contai 100.0 6.2E-37 2.1E-41 250.8 30.0 239 26-302 102-352 (401)
81 2pm7_B Protein transport prote 100.0 4E-37 1.4E-41 241.8 27.6 207 50-289 2-238 (297)
82 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.7E-36 9.2E-41 250.4 33.6 270 10-290 151-443 (445)
83 3sfz_A APAF-1, apoptotic pepti 100.0 2.8E-37 9.7E-42 285.4 27.1 276 19-300 844-1219(1249)
84 3dw8_B Serine/threonine-protei 100.0 2.3E-36 7.9E-41 250.8 29.5 244 19-288 97-445 (447)
85 2hes_X YDR267CP; beta-propelle 100.0 1.5E-36 5.3E-41 242.0 27.2 214 46-289 3-230 (330)
86 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.5E-36 1.2E-40 250.0 29.5 241 14-287 3-337 (450)
87 1pgu_A Actin interacting prote 100.0 3.7E-36 1.3E-40 259.1 29.2 241 17-296 20-291 (615)
88 3zwl_B Eukaryotic translation 100.0 3.2E-35 1.1E-39 237.8 32.9 226 49-281 24-280 (369)
89 3dwl_C Actin-related protein 2 100.0 2.2E-37 7.7E-42 251.4 20.3 258 11-287 48-377 (377)
90 4aow_A Guanine nucleotide-bind 100.0 3.2E-35 1.1E-39 235.4 32.2 241 44-291 25-288 (340)
91 4h5i_A Guanine nucleotide-exch 100.0 6.7E-36 2.3E-40 241.3 26.3 199 19-249 137-343 (365)
92 3bg1_A Protein SEC13 homolog; 100.0 1E-36 3.5E-41 241.5 20.8 208 52-289 8-247 (316)
93 2w18_A PALB2, fancn, partner a 100.0 2.8E-35 9.6E-40 227.9 27.4 230 29-287 56-355 (356)
94 3dm0_A Maltose-binding peripla 100.0 3.9E-35 1.3E-39 256.0 31.4 235 50-291 375-634 (694)
95 3gre_A Serine/threonine-protei 100.0 1.6E-36 5.6E-41 251.1 21.3 263 21-297 33-368 (437)
96 3k26_A Polycomb protein EED; W 100.0 7.8E-36 2.7E-40 241.1 24.0 224 19-248 73-365 (366)
97 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.2E-35 1.1E-39 244.2 27.9 239 18-289 105-391 (450)
98 1sq9_A Antiviral protein SKI8; 100.0 5E-35 1.7E-39 239.1 27.0 242 49-296 8-330 (397)
99 3vu4_A KMHSV2; beta-propeller 100.0 5.8E-34 2E-38 229.2 32.7 260 19-289 23-336 (355)
100 2j04_A TAU60, YPL007P, hypothe 100.0 3.8E-35 1.3E-39 241.2 25.6 235 14-288 14-296 (588)
101 3v7d_B Cell division control p 100.0 5.9E-34 2E-38 237.6 32.2 265 10-288 154-462 (464)
102 3jrp_A Fusion protein of prote 100.0 1.5E-34 5E-39 234.8 27.4 213 47-290 1-241 (379)
103 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-34 3.8E-39 258.2 28.8 238 18-280 20-296 (902)
104 3ei3_B DNA damage-binding prot 100.0 1.2E-34 4.2E-39 235.8 25.9 220 42-296 58-290 (383)
105 3mkq_A Coatomer beta'-subunit; 100.0 3.9E-34 1.3E-38 254.1 31.2 239 48-291 4-261 (814)
106 4e54_B DNA damage-binding prot 100.0 2.3E-35 7.8E-40 244.0 21.5 208 49-290 111-328 (435)
107 3bws_A Protein LP49; two-domai 100.0 1.8E-33 6E-38 232.6 32.5 261 20-288 127-431 (433)
108 3odt_A Protein DOA1; ubiquitin 100.0 1.1E-33 3.8E-38 223.8 29.6 243 47-299 8-266 (313)
109 1l0q_A Surface layer protein; 100.0 1.2E-32 4.1E-37 224.7 34.0 254 28-291 3-277 (391)
110 3i2n_A WD repeat-containing pr 100.0 1.1E-33 3.8E-38 227.8 25.5 235 51-289 12-291 (357)
111 3vu4_A KMHSV2; beta-propeller 100.0 5.1E-33 1.7E-37 223.8 27.4 238 41-290 3-272 (355)
112 4gga_A P55CDC, cell division c 100.0 7.5E-33 2.6E-37 227.9 28.6 242 19-268 151-414 (420)
113 2xyi_A Probable histone-bindin 100.0 5E-33 1.7E-37 229.6 27.2 211 51-289 122-353 (430)
114 4a11_B DNA excision repair pro 100.0 7.5E-34 2.6E-38 232.8 22.0 221 35-291 21-278 (408)
115 2j04_A TAU60, YPL007P, hypothe 100.0 2.7E-33 9.4E-38 230.2 25.0 221 17-281 87-351 (588)
116 3lrv_A PRE-mRNA-splicing facto 100.0 1E-33 3.6E-38 226.9 21.9 224 30-290 88-334 (343)
117 1yfq_A Cell cycle arrest prote 100.0 4.3E-33 1.5E-37 223.2 25.1 241 51-298 5-292 (342)
118 3mmy_A MRNA export factor; mRN 100.0 5.2E-33 1.8E-37 224.7 24.7 228 41-301 23-317 (368)
119 3f3f_A Nucleoporin SEH1; struc 100.0 5.2E-33 1.8E-37 222.9 24.2 216 51-289 5-249 (351)
120 3jro_A Fusion protein of prote 100.0 6.8E-33 2.3E-37 243.4 25.7 210 50-290 2-239 (753)
121 4ggc_A P55CDC, cell division c 100.0 1.9E-31 6.4E-36 211.5 29.7 225 19-251 71-317 (318)
122 1p22_A F-BOX/WD-repeat protein 100.0 1.2E-31 4E-36 221.9 28.8 221 54-290 130-366 (435)
123 2w18_A PALB2, fancn, partner a 100.0 9.6E-32 3.3E-36 208.2 26.0 196 20-247 138-355 (356)
124 1l0q_A Surface layer protein; 100.0 8.4E-30 2.9E-34 207.8 34.3 236 18-261 34-287 (391)
125 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.3E-30 1.1E-34 211.4 26.2 236 27-300 143-398 (415)
126 4gq1_A NUP37; propeller, trans 100.0 4.3E-31 1.5E-35 215.4 20.4 205 64-300 96-360 (393)
127 1nir_A Nitrite reductase; hemo 100.0 1.7E-28 5.7E-33 207.2 33.1 264 22-291 144-460 (543)
128 3u4y_A Uncharacterized protein 100.0 6.8E-28 2.3E-32 192.2 32.1 264 27-297 10-312 (331)
129 3bws_A Protein LP49; two-domai 100.0 2.2E-27 7.5E-32 196.1 31.1 223 20-249 174-432 (433)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.7E-28 5.7E-33 201.3 22.7 241 21-297 68-352 (415)
131 2ecf_A Dipeptidyl peptidase IV 100.0 5.7E-28 2E-32 212.5 26.3 265 18-289 39-413 (741)
132 2ojh_A Uncharacterized protein 100.0 6.9E-28 2.4E-32 188.8 22.3 242 32-281 17-292 (297)
133 1nir_A Nitrite reductase; hemo 100.0 2.9E-26 9.8E-31 193.6 33.4 269 18-293 181-518 (543)
134 3vgz_A Uncharacterized protein 100.0 6.6E-26 2.2E-30 182.2 31.5 245 14-292 39-306 (353)
135 1ri6_A Putative isomerase YBHE 100.0 4.8E-26 1.6E-30 182.2 29.6 240 18-288 40-307 (343)
136 1pby_B Quinohemoprotein amine 100.0 2.6E-26 9E-31 183.3 26.8 257 28-291 2-312 (337)
137 3hfq_A Uncharacterized protein 100.0 1.6E-25 5.3E-30 179.7 29.8 243 18-289 42-317 (347)
138 3vgz_A Uncharacterized protein 100.0 1.5E-25 5.1E-30 180.1 29.5 232 18-281 91-334 (353)
139 1jmx_B Amine dehydrogenase; ox 100.0 8.3E-26 2.9E-30 181.3 26.4 236 21-291 5-327 (349)
140 1xfd_A DIP, dipeptidyl aminope 99.9 8.2E-27 2.8E-31 204.7 18.1 255 18-278 19-323 (723)
141 2z3z_A Dipeptidyl aminopeptida 99.9 1.6E-25 5.6E-30 195.9 25.1 258 21-289 31-389 (706)
142 2oit_A Nucleoporin 214KDA; NH2 99.9 1.2E-25 4E-30 185.0 22.6 199 18-250 39-279 (434)
143 1pby_B Quinohemoprotein amine 99.9 8.4E-25 2.9E-29 174.5 24.9 235 17-260 35-321 (337)
144 2oit_A Nucleoporin 214KDA; NH2 99.9 9.5E-26 3.3E-30 185.6 19.7 216 37-290 23-279 (434)
145 3scy_A Hypothetical bacterial 99.9 1.6E-23 5.6E-28 168.9 31.6 243 19-289 53-337 (361)
146 1ri6_A Putative isomerase YBHE 99.9 1.5E-24 5.2E-29 173.4 25.4 230 28-288 5-261 (343)
147 2ecf_A Dipeptidyl peptidase IV 99.9 1.1E-24 3.7E-29 191.8 25.6 265 19-294 112-464 (741)
148 2z3z_A Dipeptidyl aminopeptida 99.9 2.8E-24 9.5E-29 188.2 26.9 243 19-291 124-437 (706)
149 3o4h_A Acylamino-acid-releasin 99.9 1.1E-24 3.7E-29 186.6 21.6 230 17-287 23-274 (582)
150 1xfd_A DIP, dipeptidyl aminope 99.9 1.1E-24 3.6E-29 191.3 21.9 261 19-290 64-394 (723)
151 1k32_A Tricorn protease; prote 99.9 2E-24 6.9E-29 196.2 24.2 226 20-287 249-500 (1045)
152 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.1E-23 3.9E-28 170.0 25.3 247 18-293 42-345 (365)
153 1z68_A Fibroblast activation p 99.9 4.9E-25 1.7E-29 193.3 17.5 255 19-296 19-353 (719)
154 1jmx_B Amine dehydrogenase; ox 99.9 4.9E-23 1.7E-27 165.1 25.6 229 18-259 45-335 (349)
155 4a5s_A Dipeptidyl peptidase 4 99.9 1.2E-23 3.9E-28 184.9 21.8 269 17-296 18-360 (740)
156 1k32_A Tricorn protease; prote 99.9 1.3E-23 4.5E-28 190.9 22.0 237 20-299 208-471 (1045)
157 3u4y_A Uncharacterized protein 99.9 6.8E-22 2.3E-26 157.4 29.3 248 20-272 44-326 (331)
158 3pe7_A Oligogalacturonate lyas 99.9 4.1E-23 1.4E-27 168.1 22.7 266 21-291 41-384 (388)
159 2oiz_A Aromatic amine dehydrog 99.9 6E-22 2E-26 159.3 25.5 241 25-273 13-360 (361)
160 3hfq_A Uncharacterized protein 99.9 1.4E-21 4.8E-26 156.7 26.8 235 35-288 14-270 (347)
161 2ojh_A Uncharacterized protein 99.9 4.8E-22 1.6E-26 155.5 22.5 207 80-292 20-261 (297)
162 3o4h_A Acylamino-acid-releasin 99.9 2.5E-22 8.7E-27 171.9 19.1 223 19-289 68-313 (582)
163 3fvz_A Peptidyl-glycine alpha- 99.9 1.9E-20 6.6E-25 148.9 27.5 249 17-289 25-322 (329)
164 3e5z_A Putative gluconolactona 99.9 8.3E-20 2.8E-24 143.1 30.6 235 18-295 30-292 (296)
165 1z68_A Fibroblast activation p 99.9 3.8E-22 1.3E-26 175.0 18.2 242 18-289 62-391 (719)
166 3scy_A Hypothetical bacterial 99.9 8.2E-20 2.8E-24 147.2 29.7 214 26-269 108-360 (361)
167 2gop_A Trilobed protease; beta 99.9 7.7E-20 2.6E-24 146.5 28.3 257 26-303 23-344 (347)
168 3c5m_A Oligogalacturonate lyas 99.9 5.4E-21 1.8E-25 155.9 21.5 260 20-289 40-382 (396)
169 1q7f_A NHL, brain tumor CG1071 99.9 3.8E-19 1.3E-23 138.6 30.4 237 18-289 32-280 (286)
170 3azo_A Aminopeptidase; POP fam 99.9 2.4E-20 8.2E-25 162.1 24.4 243 21-298 29-334 (662)
171 3no2_A Uncharacterized protein 99.9 3.2E-19 1.1E-23 137.8 27.1 220 25-279 3-231 (276)
172 3azo_A Aminopeptidase; POP fam 99.9 4.6E-20 1.6E-24 160.4 22.2 234 25-295 88-375 (662)
173 1jof_A Carboxy-CIS,CIS-muconat 99.9 5.3E-19 1.8E-23 142.7 26.0 230 29-288 4-290 (365)
174 2xdw_A Prolyl endopeptidase; a 99.9 9.3E-19 3.2E-23 153.2 29.2 239 18-291 127-416 (710)
175 3pe7_A Oligogalacturonate lyas 99.9 2.6E-20 9E-25 151.5 18.1 254 40-298 13-338 (388)
176 1rwi_B Serine/threonine-protei 99.8 5.9E-18 2E-22 130.7 26.9 239 17-291 25-266 (270)
177 2dg1_A DRP35, lactonase; beta 99.8 1.2E-17 4.2E-22 132.9 29.3 236 19-289 48-314 (333)
178 3dsm_A Uncharacterized protein 99.8 8E-18 2.7E-22 133.6 26.8 229 26-294 53-307 (328)
179 4a5s_A Dipeptidyl peptidase 4 99.8 9.2E-19 3.1E-23 153.9 23.0 259 21-289 67-398 (740)
180 2bkl_A Prolyl endopeptidase; m 99.8 1.9E-18 6.4E-23 150.9 22.7 242 18-296 123-404 (695)
181 1qks_A Cytochrome CD1 nitrite 99.8 1.3E-16 4.5E-21 134.7 32.8 259 26-290 166-478 (567)
182 3c5m_A Oligogalacturonate lyas 99.8 1.6E-18 5.3E-23 141.3 19.3 254 40-298 13-338 (396)
183 2dg1_A DRP35, lactonase; beta 99.8 6.8E-18 2.3E-22 134.5 21.1 238 20-295 10-269 (333)
184 3e5z_A Putative gluconolactona 99.8 7.6E-17 2.6E-21 126.2 25.5 214 49-297 19-254 (296)
185 2mad_H Methylamine dehydrogena 99.8 1.2E-15 4.2E-20 122.7 31.6 266 23-292 28-353 (373)
186 3dsm_A Uncharacterized protein 99.8 2.6E-16 8.9E-21 124.9 26.8 223 35-292 15-256 (328)
187 1pjx_A Dfpase, DIISOPROPYLFLUO 99.8 6.2E-16 2.1E-20 122.0 28.6 236 18-289 20-299 (314)
188 3sjl_D Methylamine dehydrogena 99.8 1.8E-16 6.3E-21 126.1 25.3 244 21-271 38-384 (386)
189 2xdw_A Prolyl endopeptidase; a 99.8 1.2E-16 4.3E-21 139.8 25.9 235 24-288 80-365 (710)
190 3fvz_A Peptidyl-glycine alpha- 99.8 6.8E-17 2.3E-21 128.4 22.1 201 18-249 93-322 (329)
191 2z2n_A Virginiamycin B lyase; 99.8 1.4E-14 4.8E-19 113.3 34.3 263 18-291 17-297 (299)
192 1qks_A Cytochrome CD1 nitrite 99.8 1.8E-15 6.3E-20 127.7 29.9 270 18-293 199-542 (567)
193 1q7f_A NHL, brain tumor CG1071 99.8 9.1E-16 3.1E-20 119.4 25.2 198 18-251 79-282 (286)
194 1yr2_A Prolyl oligopeptidase; 99.8 4.5E-16 1.5E-20 136.8 25.5 243 18-295 165-447 (741)
195 2bkl_A Prolyl endopeptidase; m 99.8 4.2E-16 1.5E-20 136.1 23.9 234 22-288 74-348 (695)
196 2mad_H Methylamine dehydrogena 99.7 2.3E-14 7.9E-19 115.3 31.7 226 20-256 70-357 (373)
197 3c75_H MADH, methylamine dehyd 99.7 7.6E-16 2.6E-20 124.7 23.1 264 25-292 82-405 (426)
198 2gop_A Trilobed protease; beta 99.7 2.3E-15 7.8E-20 120.5 25.2 228 17-262 60-342 (347)
199 3g4e_A Regucalcin; six bladed 99.7 9.1E-15 3.1E-19 114.4 26.8 224 19-279 16-260 (297)
200 3hrp_A Uncharacterized protein 99.7 1.6E-14 5.3E-19 117.9 28.0 236 17-285 132-404 (409)
201 2oiz_A Aromatic amine dehydrog 99.7 5E-15 1.7E-19 119.0 24.4 219 68-290 14-335 (361)
202 3dr2_A Exported gluconolactona 99.7 4.2E-14 1.4E-18 111.1 28.7 222 19-281 48-297 (305)
203 2qc5_A Streptogramin B lactona 99.7 2.8E-13 9.5E-18 105.9 32.4 258 17-287 21-296 (300)
204 1xip_A Nucleoporin NUP159; bet 99.7 7.8E-16 2.7E-20 122.9 17.4 172 59-278 39-231 (388)
205 3no2_A Uncharacterized protein 99.7 5.5E-15 1.9E-19 114.0 21.6 184 68-288 4-194 (276)
206 1xip_A Nucleoporin NUP159; bet 99.7 1.7E-15 5.7E-20 121.1 19.0 174 18-236 40-231 (388)
207 1yr2_A Prolyl oligopeptidase; 99.7 9.4E-15 3.2E-19 128.5 24.2 235 22-288 113-392 (741)
208 2ghs_A AGR_C_1268P; regucalcin 99.7 1.6E-13 5.3E-18 108.8 28.1 221 19-279 52-290 (326)
209 1mda_H Methylamine dehydrogena 99.7 1.7E-14 5.9E-19 114.9 21.9 233 28-271 33-367 (368)
210 3c75_H MADH, methylamine dehyd 99.7 1.8E-14 6.3E-19 116.6 22.3 228 20-256 122-409 (426)
211 1rwi_B Serine/threonine-protei 99.7 1.3E-14 4.4E-19 111.9 20.0 199 18-252 69-267 (270)
212 3iuj_A Prolyl endopeptidase; h 99.7 3.1E-14 1.1E-18 124.2 22.9 238 19-294 132-410 (693)
213 2hz6_A Endoplasmic reticulum t 99.6 1.5E-16 5.3E-21 128.1 5.8 204 26-274 8-217 (369)
214 2z2n_A Virginiamycin B lyase; 99.6 7E-12 2.4E-16 97.9 29.0 223 56-288 13-254 (299)
215 2ece_A 462AA long hypothetical 99.6 1.3E-12 4.3E-17 104.9 24.3 227 25-279 93-399 (462)
216 2qe8_A Uncharacterized protein 99.6 4.7E-13 1.6E-17 106.9 20.8 258 17-281 18-311 (343)
217 3hrp_A Uncharacterized protein 99.6 5.3E-12 1.8E-16 102.9 25.2 206 59-297 132-362 (409)
218 3dr2_A Exported gluconolactona 99.5 5.9E-12 2E-16 98.8 22.8 212 49-296 36-274 (305)
219 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 5.5E-12 1.9E-16 99.3 22.5 196 58-288 18-255 (314)
220 1fwx_A Nitrous oxide reductase 99.5 2.5E-12 8.4E-17 106.8 21.0 257 25-293 99-435 (595)
221 3g4e_A Regucalcin; six bladed 99.5 3.1E-11 1.1E-15 94.3 25.6 193 16-237 54-260 (297)
222 2qc5_A Streptogramin B lactona 99.5 2E-10 6.8E-15 89.6 29.9 222 57-288 19-259 (300)
223 3iuj_A Prolyl endopeptidase; h 99.5 7.7E-12 2.6E-16 109.1 22.8 206 56-294 127-364 (693)
224 2iwa_A Glutamine cyclotransfer 99.5 8.1E-11 2.8E-15 89.0 23.2 211 47-291 9-237 (266)
225 1kb0_A Quinohemoprotein alcoho 99.5 1.8E-11 6.3E-16 106.0 22.2 246 27-276 174-535 (677)
226 2ghs_A AGR_C_1268P; regucalcin 99.5 6.5E-11 2.2E-15 93.7 23.4 199 60-295 51-266 (326)
227 1yiq_A Quinohemoprotein alcoho 99.4 4.6E-11 1.6E-15 103.8 23.9 232 36-275 182-532 (689)
228 3q7m_A Lipoprotein YFGL, BAMB; 99.4 3.5E-10 1.2E-14 91.4 27.5 245 26-285 102-374 (376)
229 1kb0_A Quinohemoprotein alcoho 99.4 2.2E-11 7.4E-16 105.6 21.2 243 26-291 127-509 (677)
230 2qe8_A Uncharacterized protein 99.4 8.8E-11 3E-15 93.7 22.6 205 58-287 17-276 (343)
231 3nol_A Glutamine cyclotransfer 99.4 9.7E-11 3.3E-15 87.5 20.9 205 48-289 32-254 (262)
232 1npe_A Nidogen, entactin; glyc 99.4 2.5E-09 8.4E-14 82.1 29.2 221 17-273 37-263 (267)
233 2ece_A 462AA long hypothetical 99.4 3E-10 1E-14 91.4 24.6 221 38-288 44-351 (462)
234 2iwa_A Glutamine cyclotransfer 99.4 1.8E-10 6.3E-15 87.0 22.0 201 19-250 24-238 (266)
235 1fwx_A Nitrous oxide reductase 99.4 1.3E-10 4.4E-15 96.6 22.7 242 30-289 18-361 (595)
236 3hxj_A Pyrrolo-quinoline quino 99.4 1.4E-10 4.7E-15 91.9 22.2 199 81-290 116-325 (330)
237 1yiq_A Quinohemoprotein alcoho 99.4 7.5E-11 2.6E-15 102.4 21.8 245 26-291 120-507 (689)
238 3nol_A Glutamine cyclotransfer 99.4 1.6E-10 5.5E-15 86.3 20.3 186 21-238 48-244 (262)
239 3q7m_A Lipoprotein YFGL, BAMB; 99.4 1.4E-09 4.6E-14 87.9 27.0 251 26-291 52-339 (376)
240 2fp8_A Strictosidine synthase; 99.3 6.1E-09 2.1E-13 82.2 28.3 232 17-289 20-313 (322)
241 3hxj_A Pyrrolo-quinoline quino 99.3 8.8E-11 3E-15 93.0 17.6 246 27-292 30-287 (330)
242 3nok_A Glutaminyl cyclase; bet 99.3 4.8E-10 1.6E-14 83.7 20.1 201 48-289 44-264 (268)
243 3sjl_D Methylamine dehydrogena 99.3 3.7E-10 1.3E-14 90.1 20.6 198 63-290 38-257 (386)
244 3nok_A Glutaminyl cyclase; bet 99.3 4.1E-10 1.4E-14 84.1 19.5 180 26-237 64-253 (268)
245 2hz6_A Endoplasmic reticulum t 99.3 2.4E-13 8.1E-18 109.5 1.2 181 68-290 8-193 (369)
246 3mbr_X Glutamine cyclotransfer 99.3 4.3E-09 1.5E-13 78.0 23.2 206 48-290 10-234 (243)
247 3mbr_X Glutamine cyclotransfer 99.3 4.2E-09 1.4E-13 78.0 22.7 184 22-237 27-222 (243)
248 1npe_A Nidogen, entactin; glyc 99.3 2E-08 6.9E-13 77.0 27.7 225 27-289 1-238 (267)
249 1mda_H Methylamine dehydrogena 99.2 5.4E-09 1.8E-13 83.4 21.5 203 83-292 47-349 (368)
250 1kv9_A Type II quinohemoprotei 99.2 1.1E-08 3.8E-13 88.6 22.2 245 26-291 116-490 (668)
251 1k3i_A Galactose oxidase precu 99.2 5E-08 1.7E-12 84.6 26.2 259 20-280 190-530 (656)
252 2p4o_A Hypothetical protein; p 99.2 4.6E-07 1.6E-11 70.9 29.3 234 17-280 33-277 (306)
253 1kv9_A Type II quinohemoprotei 99.1 2.5E-08 8.7E-13 86.4 23.8 236 36-279 177-520 (668)
254 2ad6_A Methanol dehydrogenase 99.1 3.6E-08 1.2E-12 83.8 22.6 248 27-279 160-525 (571)
255 4a2l_A BT_4663, two-component 99.1 9.9E-07 3.4E-11 78.4 31.5 263 25-295 182-486 (795)
256 3qqz_A Putative uncharacterize 99.1 5.5E-07 1.9E-11 67.7 24.6 211 52-287 21-249 (255)
257 2fp8_A Strictosidine synthase; 99.1 9E-08 3.1E-12 75.5 21.6 202 59-295 20-275 (322)
258 2ad6_A Methanol dehydrogenase 99.0 2.8E-07 9.7E-12 78.3 25.3 257 27-291 62-496 (571)
259 1w6s_A Methanol dehydrogenase 99.0 3.6E-07 1.2E-11 77.8 25.6 112 27-143 62-201 (599)
260 1flg_A Protein (quinoprotein e 99.0 1.2E-07 4.1E-12 80.7 22.5 245 29-278 170-547 (582)
261 3v65_B Low-density lipoprotein 99.0 1.3E-06 4.6E-11 70.5 26.8 206 28-269 88-297 (386)
262 1w6s_A Methanol dehydrogenase 99.0 2E-07 6.8E-12 79.4 22.7 244 28-277 167-533 (599)
263 3v64_C Agrin; beta propeller, 99.0 3.8E-06 1.3E-10 66.9 27.8 206 28-269 45-254 (349)
264 3v64_C Agrin; beta propeller, 99.0 3.5E-06 1.2E-10 67.1 27.5 215 19-268 76-294 (349)
265 3v65_B Low-density lipoprotein 98.9 2.5E-06 8.6E-11 69.0 26.4 215 19-268 119-337 (386)
266 2xe4_A Oligopeptidase B; hydro 98.9 2.6E-07 9E-12 81.3 21.6 197 59-286 175-395 (751)
267 3tc9_A Hypothetical hydrolase; 98.9 2.9E-06 9.9E-11 69.6 26.3 231 17-280 138-418 (430)
268 4a2l_A BT_4663, two-component 98.9 5.6E-06 1.9E-10 73.6 29.7 258 26-295 320-620 (795)
269 3p5b_L Low density lipoprotein 98.9 1.3E-05 4.4E-10 65.1 29.5 205 28-268 84-298 (400)
270 2xe4_A Oligopeptidase B; hydro 98.9 1.1E-06 3.7E-11 77.5 24.4 113 19-134 177-305 (751)
271 1flg_A Protein (quinoprotein e 98.9 1.1E-06 3.6E-11 75.0 22.9 244 26-290 116-517 (582)
272 4hw6_A Hypothetical protein, I 98.9 4.3E-06 1.5E-10 68.6 25.8 236 18-285 141-427 (433)
273 1ijq_A LDL receptor, low-densi 98.9 1.2E-05 4.1E-10 63.1 29.0 207 18-257 32-246 (316)
274 1ijq_A LDL receptor, low-densi 98.9 1.4E-05 4.7E-10 62.8 30.2 205 29-270 3-218 (316)
275 3v9f_A Two-component system se 98.8 1.6E-05 5.4E-10 70.6 29.8 260 26-295 323-617 (781)
276 3qqz_A Putative uncharacterize 98.8 5.4E-06 1.8E-10 62.3 22.4 206 17-247 28-251 (255)
277 2p4o_A Hypothetical protein; p 98.8 1.6E-05 5.3E-10 62.2 26.2 206 48-290 23-243 (306)
278 3sov_A LRP-6, low-density lipo 98.8 2.1E-05 7.3E-10 61.7 26.9 208 29-271 6-219 (318)
279 3p5b_L Low density lipoprotein 98.8 3.5E-05 1.2E-09 62.6 28.8 216 19-267 115-338 (400)
280 3v9f_A Two-component system se 98.8 3.2E-05 1.1E-09 68.6 29.8 257 29-294 175-483 (781)
281 3amr_A 3-phytase; beta-propell 98.8 9.1E-06 3.1E-10 63.5 22.1 194 27-256 40-271 (355)
282 3m0c_C LDL receptor, low-densi 98.7 5.4E-05 1.8E-09 66.6 27.7 215 29-281 397-621 (791)
283 3m0c_C LDL receptor, low-densi 98.6 0.00019 6.6E-09 63.2 28.8 204 20-257 428-640 (791)
284 3sov_A LRP-6, low-density lipo 98.6 0.00011 3.7E-09 57.6 28.6 213 20-267 39-256 (318)
285 1n7d_A LDL receptor, low-densi 98.6 1.2E-06 4.2E-11 76.2 14.1 217 20-269 410-634 (699)
286 3amr_A 3-phytase; beta-propell 98.5 5.1E-05 1.7E-09 59.4 21.0 187 69-288 40-262 (355)
287 2ism_A Putative oxidoreductase 98.5 0.00011 3.9E-09 58.5 23.7 102 17-121 32-153 (352)
288 1n7d_A LDL receptor, low-densi 98.5 3.5E-06 1.2E-10 73.4 15.0 201 36-271 385-595 (699)
289 4hw6_A Hypothetical protein, I 98.5 0.00015 5.2E-09 59.4 23.6 197 59-289 140-374 (433)
290 3s94_A LRP-6, low-density lipo 98.5 0.00028 9.6E-09 60.6 25.9 210 36-281 17-232 (619)
291 3kya_A Putative phosphatase; s 98.5 0.00036 1.2E-08 57.7 27.3 253 18-289 141-475 (496)
292 2xbg_A YCF48-like protein; pho 98.4 0.00031 1E-08 55.4 25.6 228 20-288 84-319 (327)
293 1k3i_A Galactose oxidase precu 98.4 5.1E-05 1.8E-09 65.9 20.4 228 62-291 190-499 (656)
294 3tc9_A Hypothetical hydrolase; 98.4 6.8E-05 2.3E-09 61.5 19.7 155 59-248 138-300 (430)
295 2xzh_A Clathrin heavy chain 1; 98.4 0.00034 1.2E-08 53.9 28.8 225 17-252 68-335 (365)
296 2p9w_A MAL S 1 allergenic prot 98.4 7.2E-05 2.5E-09 58.0 18.2 175 56-250 11-216 (334)
297 2vpj_A Kelch-like protein 12; 98.4 0.00034 1.2E-08 54.3 22.5 228 25-290 13-279 (301)
298 4a0p_A LRP6, LRP-6, low-densit 98.4 0.00099 3.4E-08 57.3 28.8 205 29-270 8-217 (628)
299 3sre_A PON1, serum paraoxonase 98.3 0.00035 1.2E-08 55.3 20.2 196 17-248 51-297 (355)
300 1bpo_A Protein (clathrin); cla 98.3 0.001 3.5E-08 53.4 28.9 226 16-252 66-334 (494)
301 3pbp_A Nucleoporin NUP82; beta 98.2 0.00022 7.5E-09 57.1 18.1 158 19-200 24-208 (452)
302 3a9g_A Putative uncharacterize 98.2 0.0011 3.8E-08 52.8 27.0 219 17-237 30-330 (354)
303 3s94_A LRP-6, low-density lipo 98.2 0.0019 6.4E-08 55.6 25.1 201 19-254 43-248 (619)
304 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0022 7.4E-08 55.2 28.3 200 18-254 39-242 (628)
305 2xn4_A Kelch-like protein 2; s 98.2 0.00089 3E-08 52.0 20.9 227 27-291 16-278 (302)
306 2g8s_A Glucose/sorbosone dehyd 98.2 0.0014 4.8E-08 52.2 24.1 225 17-242 19-347 (353)
307 3kya_A Putative phosphatase; s 98.2 0.0019 6.4E-08 53.5 23.1 155 60-248 141-340 (496)
308 3ii7_A Kelch-like protein 7; p 98.2 0.00088 3E-08 52.1 20.6 226 27-290 12-273 (306)
309 3sre_A PON1, serum paraoxonase 98.2 0.00076 2.6E-08 53.4 20.1 195 59-285 51-292 (355)
310 1zgk_A Kelch-like ECH-associat 98.1 0.0012 4E-08 51.5 20.0 228 26-291 24-289 (308)
311 2p9w_A MAL S 1 allergenic prot 98.1 0.0018 6.2E-08 50.3 24.9 207 18-249 15-265 (334)
312 2vpj_A Kelch-like protein 12; 97.9 0.0017 5.7E-08 50.4 17.7 191 25-251 61-280 (301)
313 2xn4_A Kelch-like protein 2; s 97.9 0.002 6.9E-08 49.9 17.2 190 26-251 61-278 (302)
314 3pbp_A Nucleoporin NUP82; beta 97.8 0.0032 1.1E-07 50.6 17.6 161 64-245 27-208 (452)
315 3a9g_A Putative uncharacterize 97.8 0.0083 2.8E-07 47.7 24.2 214 58-279 29-330 (354)
316 3ii7_A Kelch-like protein 7; p 97.8 0.0032 1.1E-07 48.9 17.4 190 26-251 55-274 (306)
317 2xbg_A YCF48-like protein; pho 97.7 0.0092 3.2E-07 46.9 27.1 218 20-281 40-270 (327)
318 4asc_A Kelch repeat and BTB do 97.7 0.0088 3E-07 46.6 22.0 187 29-251 7-223 (315)
319 3ei3_A DNA damage-binding prot 97.7 0.03 1E-06 51.8 31.3 253 27-291 571-915 (1158)
320 2zwa_A Leucine carboxyl methyl 97.7 0.022 7.4E-07 49.8 22.8 230 25-281 396-675 (695)
321 3das_A Putative oxidoreductase 97.6 0.015 5.1E-07 45.9 19.5 152 102-278 31-219 (347)
322 2ism_A Putative oxidoreductase 97.6 0.0084 2.9E-07 47.7 17.5 106 104-236 32-152 (352)
323 1xi4_A Clathrin heavy chain; a 97.6 0.005 1.7E-07 57.0 17.4 210 23-263 73-303 (1630)
324 4asc_A Kelch repeat and BTB do 97.5 0.0095 3.2E-07 46.5 16.7 191 25-251 44-279 (315)
325 3s25_A Hypothetical 7-bladed b 97.5 0.018 6.2E-07 44.6 19.8 100 24-133 22-138 (302)
326 2uvk_A YJHT; unknown function, 97.5 0.021 7.2E-07 45.3 19.5 94 26-123 19-128 (357)
327 1zgk_A Kelch-like ECH-associat 97.5 0.0089 3E-07 46.5 15.9 190 26-251 70-289 (308)
328 2be1_A Serine/threonine-protei 97.5 0.019 6.6E-07 45.1 17.3 114 27-143 10-140 (339)
329 2woz_A Kelch repeat and BTB do 97.5 0.024 8.3E-07 44.2 20.1 188 28-251 17-233 (318)
330 2xzh_A Clathrin heavy chain 1; 97.4 0.024 8.3E-07 43.9 27.4 234 27-270 36-311 (365)
331 1cru_A Protein (soluble quinop 97.4 0.033 1.1E-06 45.9 19.1 114 103-237 27-162 (454)
332 2woz_A Kelch repeat and BTB do 97.4 0.028 9.7E-07 43.8 18.2 192 24-251 54-289 (318)
333 2uvk_A YJHT; unknown function, 97.3 0.021 7.2E-07 45.3 16.3 58 196-256 286-349 (357)
334 2g8s_A Glucose/sorbosone dehyd 97.3 0.045 1.6E-06 43.5 25.6 68 220-287 272-350 (353)
335 1tl2_A L10, protein (tachylect 97.3 0.025 8.5E-07 41.2 14.4 153 104-287 42-206 (236)
336 1tl2_A L10, protein (tachylect 97.2 0.017 5.7E-07 42.1 13.3 67 58-132 41-115 (236)
337 1bpo_A Protein (clathrin); cla 97.2 0.056 1.9E-06 43.7 28.3 235 27-271 35-311 (494)
338 3sbq_A Nitrous-oxide reductase 97.1 0.088 3E-06 44.0 18.1 105 175-279 324-453 (638)
339 3das_A Putative oxidoreductase 97.0 0.081 2.8E-06 41.7 25.7 219 17-237 33-326 (347)
340 3s25_A Hypothetical 7-bladed b 97.0 0.075 2.6E-06 41.1 21.1 202 21-279 58-280 (302)
341 3ei3_A DNA damage-binding prot 97.0 0.24 8.1E-06 46.0 32.2 247 27-281 337-626 (1158)
342 3sbq_A Nitrous-oxide reductase 96.7 0.2 6.9E-06 41.9 21.2 91 30-122 73-196 (638)
343 2be1_A Serine/threonine-protei 96.6 0.069 2.3E-06 41.9 13.3 116 70-213 11-139 (339)
344 3ott_A Two-component system se 96.5 0.43 1.5E-05 42.2 28.4 234 29-278 34-296 (758)
345 1cru_A Protein (soluble quinop 96.1 0.49 1.7E-05 39.0 26.9 105 17-121 28-162 (454)
346 1xi4_A Clathrin heavy chain; a 96.0 0.36 1.2E-05 45.4 15.8 199 28-249 117-331 (1630)
347 2zwa_A Leucine carboxyl methyl 95.9 0.83 2.8E-05 40.0 19.4 156 67-251 396-579 (695)
348 3ott_A Two-component system se 95.5 1.3 4.3E-05 39.2 31.3 250 26-287 156-446 (758)
349 2wg3_C Hedgehog-interacting pr 94.6 1.7 5.7E-05 35.9 25.2 107 17-124 15-160 (463)
350 2wg3_C Hedgehog-interacting pr 94.3 1 3.5E-05 37.2 12.5 107 174-280 14-158 (463)
351 3qhy_B Beta-lactamase inhibito 94.3 1.4 4.6E-05 33.7 17.7 104 20-133 26-129 (282)
352 3no0_A DNA gyrase subunit A; D 92.0 3.2 0.00011 31.5 20.7 162 58-249 24-196 (276)
353 4gq2_M Nucleoporin NUP120; bet 91.8 1.1 3.6E-05 40.9 9.8 38 219-256 236-273 (950)
354 3q6k_A 43.2 kDa salivary prote 91.5 4.5 0.00015 32.3 20.1 183 83-278 124-341 (381)
355 3q6k_A 43.2 kDa salivary prote 91.2 4.8 0.00017 32.1 23.5 177 38-236 124-341 (381)
356 4fhn_B Nucleoporin NUP120; pro 91.0 0.68 2.3E-05 43.1 7.9 37 220-256 239-275 (1139)
357 3uc1_A DNA gyrase subunit A; D 91.0 4.7 0.00016 31.5 22.6 194 27-249 3-228 (327)
358 3uc1_A DNA gyrase subunit A; D 90.9 4.8 0.00016 31.4 17.9 104 26-134 108-229 (327)
359 4hvt_A Ritya.17583.B, post-pro 89.6 10 0.00035 33.3 22.9 232 23-289 137-428 (711)
360 1suu_A DNA gyrase subunit A; t 87.3 8.7 0.0003 29.7 25.7 196 24-249 5-231 (312)
361 3zwu_A Alkaline phosphatase PH 85.6 4.3 0.00015 34.7 8.5 59 176-236 478-548 (592)
362 4gq2_M Nucleoporin NUP120; bet 85.0 9.7 0.00033 34.8 11.1 37 59-98 237-273 (950)
363 4a9v_A PHOX; hydrolase, beta-p 84.9 4.5 0.00015 34.3 8.2 61 220-280 477-550 (592)
364 3l6v_A GYRA, DNA gyrase subuni 84.0 15 0.0005 29.3 24.9 108 23-135 3-134 (370)
365 3zwu_A Alkaline phosphatase PH 84.0 4.6 0.00016 34.4 8.1 57 222-278 479-548 (592)
366 4a9v_A PHOX; hydrolase, beta-p 83.2 8.3 0.00028 32.7 9.1 61 174-236 476-548 (592)
367 1zi0_A DNA gyrase subunit A; b 83.0 14 0.00049 28.4 23.9 193 26-248 2-225 (307)
368 1wp5_A Topoisomerase IV; broke 82.1 16 0.00055 28.4 24.0 198 24-249 2-225 (323)
369 4fhn_B Nucleoporin NUP120; pro 78.4 8.5 0.00029 36.0 8.5 37 59-98 239-275 (1139)
370 3f7f_A Nucleoporin NUP120; nuc 76.3 4 0.00014 35.6 5.3 37 19-55 222-259 (729)
371 3no0_A DNA gyrase subunit A; D 72.9 28 0.00096 26.3 17.0 104 26-134 79-197 (276)
372 3qhy_B Beta-lactamase inhibito 68.7 35 0.0012 25.8 17.5 187 36-273 80-266 (282)
373 3f7f_A Nucleoporin NUP120; nuc 66.8 5.9 0.0002 34.6 4.2 35 221-257 224-258 (729)
374 3b7f_A Glycosyl hydrolase, BNR 63.7 54 0.0018 26.0 22.9 98 27-129 22-143 (394)
375 1zi0_A DNA gyrase subunit A; b 59.9 57 0.0019 25.1 18.1 103 26-133 108-226 (307)
376 1olz_A Semaphorin 4D; developm 57.6 76 0.0026 27.7 9.4 57 187-244 417-477 (663)
377 4gz8_A Semaphorin-3A; multi-do 51.4 79 0.0027 27.6 8.4 57 187-244 431-495 (667)
378 1q47_A Semaphorin 3A; beta pro 51.1 56 0.0019 27.2 7.3 69 175-244 405-487 (495)
379 4hvt_A Ritya.17583.B, post-pro 49.9 1.4E+02 0.0046 26.4 18.1 37 60-96 131-170 (711)
380 1zvt_A Topoisomerase IV subuni 47.7 84 0.0029 23.4 13.5 71 175-249 85-163 (256)
381 3al9_A Plexin-A2; beta-propell 46.8 49 0.0017 28.0 6.4 69 175-244 401-476 (539)
382 3l6v_A GYRA, DNA gyrase subuni 44.5 1.2E+02 0.004 24.1 18.9 73 15-91 96-180 (370)
383 3nvq_A Semaphorin-7A; beta-pro 42.3 1.4E+02 0.0048 25.6 8.4 58 186-244 381-444 (590)
384 3b7f_A Glycosyl hydrolase, BNR 39.1 1.4E+02 0.0048 23.5 24.3 47 222-269 344-391 (394)
385 3ol2_B Plexin-B1; beta-propell 34.5 1.4E+02 0.0047 25.2 7.2 68 175-244 388-461 (528)
386 1wp5_A Topoisomerase IV; broke 33.6 1.7E+02 0.0057 22.7 22.3 111 69-204 106-225 (323)
387 3oky_B Putative uncharacterize 30.7 2.5E+02 0.0086 23.9 8.7 71 175-245 404-496 (565)
388 1q47_A Semaphorin 3A; beta pro 29.8 1.9E+02 0.0066 24.1 7.3 56 28-86 422-487 (495)
389 3oky_A Plexin-A2; transmembran 28.1 2.1E+02 0.0072 25.1 7.4 68 176-244 401-475 (681)
390 1suu_A DNA gyrase subunit A; t 25.2 2.3E+02 0.0079 21.7 22.2 152 27-204 58-231 (312)
391 3nvq_A Semaphorin-7A; beta-pro 24.3 3.1E+02 0.01 23.6 7.6 56 28-86 381-444 (590)
392 3oug_A Aspartate 1-decarboxyla 24.1 1.4E+02 0.0047 18.9 4.1 30 195-224 45-74 (114)
393 1vc3_B L-aspartate-alpha-decar 23.2 1.1E+02 0.0038 18.7 3.5 29 196-224 19-47 (96)
394 3mez_A Mannose-specific lectin 21.9 1.5E+02 0.0052 18.4 8.6 23 62-88 53-75 (111)
395 1zvt_A Topoisomerase IV subuni 20.4 2.7E+02 0.0091 20.6 16.5 149 28-204 3-163 (256)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-48 Score=318.96 Aligned_cols=271 Identities=18% Similarity=0.281 Sum_probs=244.5
Q ss_pred eeeeeccee---eEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEE
Q 036585 11 KVSLELSEE---ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 87 (304)
Q Consensus 11 ~~~~~~~~~---~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vw 87 (304)
...+.+|.. .+.++|++++|++|+.||+|++||+.+++....+.+|...|.+++|+|++++|++++. |++|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~---D~~i~iw 177 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA---DMTIKLW 177 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEET---TSCCCEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeC---CCeEEEE
Confidence 345556654 4678899999999999999999999999999999999999999999999999999998 9999999
Q ss_pred EccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccc--eeEecCCCe--EEEecCCC
Q 036585 88 SLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGL--VFGYEKGP 163 (304)
Q Consensus 88 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~ 163 (304)
|+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||++++.+...+..+... .+.+++++. +.+..++.
T Consensus 178 d~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 178 DFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp ETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 99999999999999999999999999999999999999999999999888777654433 456677764 44677889
Q ss_pred eEEEEe---------cCCCCCceEEEEecC--------------------CcEEEEeeCCCeEEEEEcCCCceeEEEEeC
Q 036585 164 LDIFSV---------GGDISDANVVKFSND--------------------GRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 214 (304)
Q Consensus 164 ~~~~~~---------~~~~~~v~~~~~~~~--------------------~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 214 (304)
+++|++ .+|...|.+++|+|+ +.+|++|+.|+.|++||+++++.+..+.
T Consensus 258 v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~-- 335 (410)
T 1vyh_C 258 VRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLV-- 335 (410)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEE--
T ss_pred EEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEE--
Confidence 999975 357889999999996 6789999999999999999999999888
Q ss_pred CCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEecc
Q 036585 215 PVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIP 287 (304)
Q Consensus 215 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~ 287 (304)
+|...|.+++|+|++++|++|+.|+.|++||+++++++..+.+|...|++++|+|++.+|++|+.| +++|+.
T Consensus 336 -~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 336 -GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp -CCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred -CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 788999999999999999999999999999999999999999999999999999999999999999 999975
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.7e-47 Score=297.57 Aligned_cols=273 Identities=18% Similarity=0.229 Sum_probs=239.0
Q ss_pred eeeeeccee---eEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEE
Q 036585 11 KVSLELSEE---ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 87 (304)
Q Consensus 11 ~~~~~~~~~---~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vw 87 (304)
...+.+|.+ .+.++|++++|++++.||.|++||+++++.+..+..|..+|.+++|+|+++.|++++. |+.|++|
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---d~~i~vw 82 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD---DFRIRVF 82 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET---TSEEEEE
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC---CCEEEEE
Confidence 445666654 4788999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred EccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCccee-eceEEEecc--ceeEecCC-C--eEEEecC
Q 036585 88 SLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKC-QGLLRVQGR--PAAAYDDQ-G--LVFGYEK 161 (304)
Q Consensus 88 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~~~~~--~~~~~~~~-~--~~~~~~~ 161 (304)
|+.+++.+..+.+|.+.|.+++|+|++++|++++.|++|++||++++.. ...+..+.. ..+.++|. + .+.+..+
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETT
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999987743 333333332 35677763 3 5567788
Q ss_pred CCeEEEEec----------CCCCCceEEEEec--CCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCC
Q 036585 162 GPLDIFSVG----------GDISDANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 229 (304)
Q Consensus 162 ~~~~~~~~~----------~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 229 (304)
+.+++|++. ++...+..+.|+| ++++|++++.|++|++||+++++.+..+. +|...|.+++|+|+
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~---~h~~~v~~~~~~p~ 239 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE---GHMSNVSFAVFHPT 239 (304)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEE---CCSSCEEEEEECSS
T ss_pred CeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeC---CCCCCEEEEEECCC
Confidence 999999874 3456788889876 77899999999999999999999999998 78999999999999
Q ss_pred CcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCc--EEEEecCc-eEEeccCC
Q 036585 230 GMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSL--MFVTGSSE-LSFWIPDL 289 (304)
Q Consensus 230 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~s~~~d-~~iw~~~~ 289 (304)
+++|++|+.||.|++||+++++.+..+..|...+.+++|+|++. ++++|+.| +.+|.+..
T Consensus 240 ~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred CCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 99999999999999999999999999999999999999999875 68898888 88887754
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.3e-47 Score=300.97 Aligned_cols=268 Identities=19% Similarity=0.268 Sum_probs=235.8
Q ss_pred ecceeeE---eecc----cCcEEEEeeCCCeEEEEecCCcce--eeeecccccceeEEEEccCCCeEEEEecCCCCCceE
Q 036585 15 ELSEEIL---QSME----VGIYLVTASDDESIRLYDVTAATC--LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 85 (304)
Q Consensus 15 ~~~~~~i---~~~~----~~~~l~~~~~d~~i~vw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 85 (304)
++|.+.| .+++ ++++|++|+.|++|+||++.+++. ...+.+|...|.+++|++++..+++++. |+.|+
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~---D~~i~ 105 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSL---DAHIR 105 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEET---TSEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeC---CCcEE
Confidence 4566554 4554 367999999999999999987653 4568899999999999999999999998 99999
Q ss_pred EEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEecc--ceeEecCCCeE--EEecC
Q 036585 86 LLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDDQGLV--FGYEK 161 (304)
Q Consensus 86 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~ 161 (304)
+||+.+++.+..+..|...+.+++|+|++++|++++.|+.|++||+++++....+..... ..+.+++++.. .+..+
T Consensus 106 lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~d 185 (321)
T 3ow8_A 106 LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAID 185 (321)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCC
Confidence 999999999999998999999999999999999999999999999999887766655443 35678888744 46677
Q ss_pred CCeEEEEe---------cCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcE
Q 036585 162 GPLDIFSV---------GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF 232 (304)
Q Consensus 162 ~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 232 (304)
+.+.+|++ .+|...|.+++|+|++++|++++.||.|++||+++++....+. .|...|.+++|+|++++
T Consensus 186 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~---~h~~~v~~~~~sp~~~~ 262 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS---GHASWVLNVAFCPDDTH 262 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC---CCSSCEEEEEECTTSSE
T ss_pred CeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc---CCCCceEEEEECCCCCE
Confidence 88888875 3578899999999999999999999999999999999888877 78899999999999999
Q ss_pred EEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 233 VISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 233 l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
|++++.|+.|++||+++++++..+.+|...|.+++|+|++++|++++.| ++||+..
T Consensus 263 l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 263 FVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999999999999999999999999 9999864
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.2e-46 Score=298.51 Aligned_cols=272 Identities=17% Similarity=0.221 Sum_probs=237.5
Q ss_pred ceeeeecceee---EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEE
Q 036585 10 DKVSLELSEEI---LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 86 (304)
Q Consensus 10 ~~~~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~v 86 (304)
....+++|... +.+++++++|++++.||+|++||+.+++.+..+..|...|.+++|+|+++++++++. |+.|++
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~---d~~v~i 123 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGL---DNICSI 123 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEET---TCEEEE
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeC---CCeEEE
Confidence 34556777654 567899999999999999999999999999999999999999999999999999998 999999
Q ss_pred EEccCc----eeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEecc--ceeEecCCCe--EEE
Q 036585 87 LSLHDN----KYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDDQGL--VFG 158 (304)
Q Consensus 87 wd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~ 158 (304)
|++.++ +....+.+|.+.|.++.|++++ .+++++.|++|++||+++++....+..+.. ..+.+++++. +.+
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 999875 3456678899999999999877 588999999999999999988777654433 3567788774 446
Q ss_pred ecCCCeEEEEec---------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCC
Q 036585 159 YEKGPLDIFSVG---------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 229 (304)
Q Consensus 159 ~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 229 (304)
..++.+++|++. +|...|.+++|+|++++|++++.||.|++||+++++.+..+.. ..+...+++++|+|+
T Consensus 203 ~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH-DNIICGITSVSFSKS 281 (340)
T ss_dssp ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-TTCCSCEEEEEECTT
T ss_pred eCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEcc-CCcccceEEEEECCC
Confidence 678899999754 5788999999999999999999999999999999887776652 224457999999999
Q ss_pred CcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEec
Q 036585 230 GMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWI 286 (304)
Q Consensus 230 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~ 286 (304)
+++|++|+.|+.|++||+.+++.+..+.+|..+|.+++|+|++.+|++|+.| ++||+
T Consensus 282 g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999999999999999999999999999999999999999999999999 99995
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2e-46 Score=299.77 Aligned_cols=239 Identities=18% Similarity=0.222 Sum_probs=204.3
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeee----ecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKT----INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 94 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~ 94 (304)
..+.|++++ .|++|+.||+|+|||+++++.+.. +.+|...|.+++|+|++++|++++. |+.|++||+++++.
T Consensus 86 ~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~---d~~i~iwd~~~~~~ 161 (344)
T 4gqb_B 86 ADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK---DICIKVWDLAQQVV 161 (344)
T ss_dssp EEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEE
T ss_pred EEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC---CCeEEEEECCCCcE
Confidence 457788875 688999999999999998876544 4479999999999999999999998 99999999999999
Q ss_pred eeecccccccEEEEEEcCCCC-EEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCC
Q 036585 95 SRYFKGHHDRVVLLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDI 173 (304)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (304)
+..+.+|.+.|.+++|+|++. +|++++.|++|++||+++++....+... .+.
T Consensus 162 ~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~---------------------------~~~ 214 (344)
T 4gqb_B 162 LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS---------------------------APG 214 (344)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------------------------------C
T ss_pred EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc---------------------------eee
Confidence 999999999999999999874 7899999999999999988766554321 234
Q ss_pred CCceEEEEecC-CcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCC-cEEEEecCCCcEEEEecCCCc
Q 036585 174 SDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGSGDGSVHAWSVRSGK 251 (304)
Q Consensus 174 ~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~v~d~~~~~ 251 (304)
..+.+++|+|+ +++|++|+.||.|++||+++++.+..+. .|...|++++|+|++ ++|++|+.|+.|+|||+++++
T Consensus 215 ~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~---~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 215 YLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA---VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp CCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE---CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred ccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc---CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc
Confidence 56889999995 5688899999999999999999999988 789999999999998 579999999999999998887
Q ss_pred eeeeeeccCCCCceEEeCCCCc-EEEEecCc--eEEeccCCccc
Q 036585 252 EVASWMSFDTEPPVIKWAPGSL-MFVTGSSE--LSFWIPDLSKL 292 (304)
Q Consensus 252 ~~~~~~~~~~~i~~~~~~~~~~-~l~s~~~d--~~iw~~~~~~~ 292 (304)
++ .+.+|.+.|++++|+|+++ +|++++.| +++|+++.+.+
T Consensus 292 ~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 292 LF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp EE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred EE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 54 5678999999999999986 57789988 99999977654
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.8e-45 Score=294.26 Aligned_cols=273 Identities=15% Similarity=0.215 Sum_probs=236.8
Q ss_pred ceeeeecceee---EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEE
Q 036585 10 DKVSLELSEEI---LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 86 (304)
Q Consensus 10 ~~~~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~v 86 (304)
....+++|... +.++|++++|++|+.||+|++||..+++....+..|...|.+++|+|++..+++++. |+.+++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~---d~~i~v 132 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGL---DNKCSV 132 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEEST---TSEEEE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeC---CCCEEE
Confidence 35567777654 567889999999999999999999999999999999999999999999999999998 999999
Q ss_pred EEccCc------eeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccc--eeEecC--C--C
Q 036585 87 LSLHDN------KYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDD--Q--G 154 (304)
Q Consensus 87 wd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~--~--~ 154 (304)
|++... .....+..|...|.++.|+|++..|++++.|++|++||+++++....+..+... .+.+.+ + .
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~ 212 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNT 212 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCE
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCE
Confidence 998643 234556789999999999999999999999999999999999888877755443 344444 3 3
Q ss_pred eEEEecCCCeEEEEec---------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEE
Q 036585 155 LVFGYEKGPLDIFSVG---------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 225 (304)
Q Consensus 155 ~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~ 225 (304)
.+.+..++.+.+|++. .|...|++++|+|++.+|++++.|++|++||+++++....+... .+...+.+++
T Consensus 213 l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~-~~~~~~~~~~ 291 (354)
T 2pbi_B 213 FVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKE-SIIFGASSVD 291 (354)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCT-TCCSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC-CcccceeEEE
Confidence 5557778999999753 57889999999999999999999999999999998777666522 2345788999
Q ss_pred EcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEec
Q 036585 226 FSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWI 286 (304)
Q Consensus 226 ~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~ 286 (304)
|+|++++|++|+.|+.|++||+.+++.+..+.+|..+|++++|+|++++|++++.| ++||+
T Consensus 292 ~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 292 FSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99999999999999999999999999999999999999999999999999999999 88885
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.7e-46 Score=301.66 Aligned_cols=278 Identities=19% Similarity=0.264 Sum_probs=234.9
Q ss_pred ceeeeecceee---EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEE
Q 036585 10 DKVSLELSEEI---LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 86 (304)
Q Consensus 10 ~~~~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~v 86 (304)
....+++|... +.++|++++|++|+.|++|++||+.+++....+..|...|.+++|+|++++|++++. |+.+++
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~---d~~v~i 134 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGL---DSACSI 134 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCS---SSCCEE
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeC---CCcEEE
Confidence 34556777654 678899999999999999999999999999999999999999999999999999998 999999
Q ss_pred EEccCce-------eeeecccccccEEEEEEcCC-CCEEEEcccCCeEEEEeCCcceeeceEEE-----ec--cceeEec
Q 036585 87 LSLHDNK-------YSRYFKGHHDRVVLLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRV-----QG--RPAAAYD 151 (304)
Q Consensus 87 wd~~~~~-------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~--~~~~~~~ 151 (304)
|++.+.. ....+.+|.+.|.++.|+|+ +..|++++.|++|++||+++++....+.. +. ...+.+.
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 9997532 34567889999999999996 45799999999999999999887765521 11 1233443
Q ss_pred C-C--CeEEEecCCCeEEEEec----------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCC--
Q 036585 152 D-Q--GLVFGYEKGPLDIFSVG----------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV-- 216 (304)
Q Consensus 152 ~-~--~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~-- 216 (304)
+ + ..+.+..++.+++|++. +|...|.+++|+|++++|++++.||+|++||+++++.+..+.....
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 3 3 35567788999999864 4788999999999999999999999999999999998887764321
Q ss_pred --CCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeee----eccCCCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 217 --SRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASW----MSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 217 --~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
+...+++++|+|+|++|++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|++++|++|+.| ++||++.
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 2235899999999999999999999999999998887766 6799999999999999999999999 9999986
Q ss_pred Cc
Q 036585 289 LS 290 (304)
Q Consensus 289 ~~ 290 (304)
..
T Consensus 375 ~~ 376 (380)
T 3iz6_a 375 GH 376 (380)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.8e-44 Score=285.90 Aligned_cols=277 Identities=22% Similarity=0.408 Sum_probs=237.6
Q ss_pred cceeeeecceee---EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceE
Q 036585 9 EDKVSLELSEEI---LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 85 (304)
Q Consensus 9 ~~~~~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 85 (304)
.....+.+|... +.++|++++|++++.||.|++|+..+++....+.+|...|.+++|+|++++|++++. |+.|+
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---d~~i~ 90 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASD---DKTLK 90 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECC---CCEEE
Confidence 345566666554 678899999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccc--eeEecCCC--eEEEecC
Q 036585 86 LLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQG--LVFGYEK 161 (304)
Q Consensus 86 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~ 161 (304)
+||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+++++....+..+... .+.+++++ .+.+..+
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999998877766544333 46677776 4456778
Q ss_pred CCeEEEEecC----------CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCc
Q 036585 162 GPLDIFSVGG----------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 231 (304)
Q Consensus 162 ~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 231 (304)
+.+.+|++.. +...+..++|+|++++|++++.||.|++||+++++....+..+......+......+++.
T Consensus 171 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (312)
T 4ery_A 171 GLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGK 250 (312)
T ss_dssp SCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSC
T ss_pred CcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCc
Confidence 8899998653 446788999999999999999999999999999998888773322222233333446889
Q ss_pred EEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEec--Cc--eEEeccC
Q 036585 232 FVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGS--SE--LSFWIPD 288 (304)
Q Consensus 232 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~--~d--~~iw~~~ 288 (304)
+|++|+.||.|++||+++++.+..+.+|...|.+++|+|+++++++++ .| +++|..+
T Consensus 251 ~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 251 WIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 999999999999999999999999999999999999999999999986 35 9999865
No 9
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-44 Score=287.76 Aligned_cols=274 Identities=16% Similarity=0.256 Sum_probs=227.2
Q ss_pred cccceeeeecceeeE---eeccc-CcEEEEeeCCCeEEEEecCC-----cceeeeecccccceeEEEEccCCCeEEEEec
Q 036585 7 EREDKVSLELSEEIL---QSMEV-GIYLVTASDDESIRLYDVTA-----ATCLKTINSKKYGVDLVCFTSHPTTVIYSSK 77 (304)
Q Consensus 7 ~~~~~~~~~~~~~~i---~~~~~-~~~l~~~~~d~~i~vw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 77 (304)
.-.....+++|...| .++++ +++|++|+.|++|++|++.+ +.++..+.+|...|.+++|+|++++|++++.
T Consensus 6 ~~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 6 VLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 334456677887664 45665 48999999999999999864 3456788999999999999999999999998
Q ss_pred CCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEecc--ceeEecCC--
Q 036585 78 NGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDDQ-- 153 (304)
Q Consensus 78 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~-- 153 (304)
|++|++||+.+++.+..+.+|...|.+++|+|++.+|++++.|++|++||++... ...+..+.. ..+.+.+.
T Consensus 86 ---D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~-~~~~~~h~~~v~~~~~~~~~~ 161 (319)
T 3frx_A 86 ---DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC-LATLLGHNDWVSQVRVVPNEK 161 (319)
T ss_dssp ---TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE-EEEECCCSSCEEEEEECCC--
T ss_pred ---CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-EEEEeccCCcEEEEEEccCCC
Confidence 9999999999999999999999999999999999999999999999999997543 333322221 12344442
Q ss_pred ------CeEEEecCCCeEEEEec---------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCC
Q 036585 154 ------GLVFGYEKGPLDIFSVG---------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 218 (304)
Q Consensus 154 ------~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~ 218 (304)
..+.+..++.+++|++. +|...|.+++|+|++++|++++.||.|++||+++++.+..+. ..
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~ 237 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS----AQ 237 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE----CC
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec----CC
Confidence 24557778888888754 588999999999999999999999999999999999988887 45
Q ss_pred CcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeee--------ccCCCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 219 NSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWM--------SFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 219 ~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~--------~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
..+.+++|+|++.+|++++.+ .+++|++.....+..+. .|...+.+++|+|+|++|++|+.| ++||++.
T Consensus 238 ~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 238 DEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp SCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 689999999999999988755 59999998776655543 356678999999999999999999 9999875
Q ss_pred C
Q 036585 289 L 289 (304)
Q Consensus 289 ~ 289 (304)
.
T Consensus 317 t 317 (319)
T 3frx_A 317 T 317 (319)
T ss_dssp E
T ss_pred e
Confidence 4
No 10
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.3e-45 Score=294.90 Aligned_cols=265 Identities=16% Similarity=0.132 Sum_probs=213.2
Q ss_pred eeeEeecccCcEEEEeeC------CCeEEEEecCCccee----eeecccccceeEEEEccCCCeEEEEecCCCCCceEEE
Q 036585 18 EEILQSMEVGIYLVTASD------DESIRLYDVTAATCL----KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 87 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~------d~~i~vw~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vw 87 (304)
...+.|+|||++|++++. |+.|++|+..++... .....|...|.+++|+|++.+ ++++. |+.|++|
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~---dg~v~lW 120 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI-LVASD---SGAVELW 120 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE-EEEET---TSCEEEC
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE-EEEEC---CCEEEEe
Confidence 456889999999999997 788999998776543 334568889999999999865 45666 9999999
Q ss_pred EccCceeeee----cccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccc--eeEecCCC---eEEE
Q 036585 88 SLHDNKYSRY----FKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQG---LVFG 158 (304)
Q Consensus 88 d~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~ 158 (304)
|+.+++.... ..+|...|.+++|+|++++|++++.|+.|++||+++++....+..+... .+.+.+++ .+.+
T Consensus 121 d~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~ 200 (357)
T 4g56_B 121 EILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSC 200 (357)
T ss_dssp --------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEE
T ss_pred eccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeee
Confidence 9998765433 3478999999999999999999999999999999999888777654433 45666554 4557
Q ss_pred ecCCCeEEEEecC-----------CCCCceEEEEecC-CcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEE
Q 036585 159 YEKGPLDIFSVGG-----------DISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 226 (304)
Q Consensus 159 ~~~~~~~~~~~~~-----------~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~ 226 (304)
..++.+++|++.. +...+.+++|+|+ +.+|++|+.|+.|++||+++++....+. .+...|++++|
T Consensus 201 ~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~---~~~~~v~~l~~ 277 (357)
T 4g56_B 201 GEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA---VHSQNITGLAY 277 (357)
T ss_dssp ETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC---CCSSCEEEEEE
T ss_pred ccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe---ccceeEEEEEE
Confidence 7789999997643 4456889999997 4688899999999999999999988887 68899999999
Q ss_pred cCCC-cEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCC-CCcEEEEecCc--eEEeccCCc
Q 036585 227 SPEG-MFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAP-GSLMFVTGSSE--LSFWIPDLS 290 (304)
Q Consensus 227 s~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~~d--~~iw~~~~~ 290 (304)
+|++ ++|++|+.|+.|+|||+++++++..+ +|...|++++|+| ++.+|++++.| +++|++..+
T Consensus 278 sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 278 SYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred cCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 9987 57999999999999999998877655 7999999999999 79999999999 999998543
No 11
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.5e-44 Score=292.80 Aligned_cols=263 Identities=21% Similarity=0.367 Sum_probs=225.4
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceeeeeccccc------------------ceeEEEEccCCCeEEEEecCCCC
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKY------------------GVDLVCFTSHPTTVIYSSKNGWD 81 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~~~~~~~d 81 (304)
.+.++|+|++||+++ ++.+++|++.+++.+..+..|.. .|.+++|+|++++|++++. |
T Consensus 69 ~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~---d 144 (393)
T 1erj_A 69 CVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAE---D 144 (393)
T ss_dssp EEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEET---T
T ss_pred EEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcC---C
Confidence 578899999999987 67899999999998887766532 3899999999999999998 9
Q ss_pred CceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEec-cceeEecC-CC--eEE
Q 036585 82 ESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDD-QG--LVF 157 (304)
Q Consensus 82 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~-~~--~~~ 157 (304)
+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|++|++||+++++....+.... ...+.+.+ ++ .+.
T Consensus 145 ~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 224 (393)
T 1erj_A 145 RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAA 224 (393)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEE
T ss_pred CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999988776665433 23456666 44 445
Q ss_pred EecCCCeEEEEec----------------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCc------------eeE
Q 036585 158 GYEKGPLDIFSVG----------------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT------------LLS 209 (304)
Q Consensus 158 ~~~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~------------~~~ 209 (304)
+..++.+++|++. +|...|.+++|+|++++|++++.||.|++||+++.. ...
T Consensus 225 ~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~ 304 (393)
T 1erj_A 225 GSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEV 304 (393)
T ss_dssp EETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEE
T ss_pred EcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceE
Confidence 6778889999753 577889999999999999999999999999997643 333
Q ss_pred EEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCC------CCcEEEEecCc--
Q 036585 210 TYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAP------GSLMFVTGSSE-- 281 (304)
Q Consensus 210 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~------~~~~l~s~~~d-- 281 (304)
.+. +|...|.+++|+|++.+|++|+.|+.|++||+++++++..+.+|...|.+++|+| ++.+|++|+.|
T Consensus 305 ~~~---~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~ 381 (393)
T 1erj_A 305 TYI---GHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 381 (393)
T ss_dssp EEE---CCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred EEe---cccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCc
Confidence 444 6888999999999999999999999999999999999999999999999999886 68999999999
Q ss_pred eEEeccCC
Q 036585 282 LSFWIPDL 289 (304)
Q Consensus 282 ~~iw~~~~ 289 (304)
++||++..
T Consensus 382 i~iW~~~~ 389 (393)
T 1erj_A 382 ARIWKYKK 389 (393)
T ss_dssp EEEEEEEE
T ss_pred EEECcccc
Confidence 99998753
No 12
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.5e-44 Score=288.58 Aligned_cols=272 Identities=15% Similarity=0.217 Sum_probs=218.7
Q ss_pred ceeeeecceeeEe---e-----cc-cCcEEEEeeCCCeEEEEecCCc-------ceeeeecccccceeEEEEccCCCeEE
Q 036585 10 DKVSLELSEEILQ---S-----ME-VGIYLVTASDDESIRLYDVTAA-------TCLKTINSKKYGVDLVCFTSHPTTVI 73 (304)
Q Consensus 10 ~~~~~~~~~~~i~---~-----~~-~~~~l~~~~~d~~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~ 73 (304)
....+++|...|. + .+ ++++|++|+.|++|++||+.+. .+...+.+|...|.+++|+|++.+++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~ 92 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAI 92 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEE
Confidence 4556778876654 3 34 7899999999999999998743 45677889999999999999999999
Q ss_pred EEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEE--E--eccceeE
Q 036585 74 YSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR--V--QGRPAAA 149 (304)
Q Consensus 74 ~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~--~~~~~~~ 149 (304)
+++. |++|++||+++++.+..+.+|...|.+++|+|++++|++++.|++|++||+.......... . .....+.
T Consensus 93 s~s~---D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 93 SSSW---DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVR 169 (343)
T ss_dssp EEET---TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEE
T ss_pred EEcC---CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeee
Confidence 9998 9999999999999999999999999999999999999999999999999997432221110 0 1122344
Q ss_pred ecCCC------------eEEEecCCCeEEEE--------ecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCC-Ccee
Q 036585 150 YDDQG------------LVFGYEKGPLDIFS--------VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR-GTLL 208 (304)
Q Consensus 150 ~~~~~------------~~~~~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~ 208 (304)
+++++ .+.+..++.+++|+ +.+|...|.+++|+|+|++|++++.||.|++||+.+ ....
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~ 249 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ 249 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS
T ss_pred eccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 55543 34456677777775 456889999999999999999999999999999944 4444
Q ss_pred EEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceee--eee-----------ccCCCCceEEeCCCCcEE
Q 036585 209 STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVA--SWM-----------SFDTEPPVIKWAPGSLMF 275 (304)
Q Consensus 209 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~--~~~-----------~~~~~i~~~~~~~~~~~l 275 (304)
..+. +...|.+++|+|++.+++++ .|+.|++||+.+++... .+. +|...|.+++|+|++++|
T Consensus 250 ~~~~----~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 324 (343)
T 2xzm_R 250 REFD----AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKL 324 (343)
T ss_dssp EEEE----CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCE
T ss_pred eeec----CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeE
Confidence 4443 45679999999999888765 57789999998766533 332 678889999999999999
Q ss_pred EEecCc--eEEeccCC
Q 036585 276 VTGSSE--LSFWIPDL 289 (304)
Q Consensus 276 ~s~~~d--~~iw~~~~ 289 (304)
++|+.| +++|+++.
T Consensus 325 ~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 325 FAGFTDGVIRTFSFET 340 (343)
T ss_dssp EEEETTSEEEEEEEEE
T ss_pred EEecCCceEEEEEEEc
Confidence 999999 99998753
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-44 Score=286.77 Aligned_cols=277 Identities=12% Similarity=0.225 Sum_probs=222.6
Q ss_pred ceeeeeccee----eEeecccCcEEEEeeCCCeEEEEecCCcceee---eecccccceeEEEEccCCCeEEEEecCCCCC
Q 036585 10 DKVSLELSEE----ILQSMEVGIYLVTASDDESIRLYDVTAATCLK---TINSKKYGVDLVCFTSHPTTVIYSSKNGWDE 82 (304)
Q Consensus 10 ~~~~~~~~~~----~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~ 82 (304)
....+++|.. .+.++|+|++||+|+.|++|+|||+.+++... ...+|...|.+++|+|++++|++++. |+
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~---D~ 83 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF---DA 83 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET---TS
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC---CC
Confidence 3455666654 58899999999999999999999998776432 23689999999999999999999998 99
Q ss_pred ceEEEEccCc--eeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeec---eEEEec--cceeEecCCC-
Q 036585 83 SLRLLSLHDN--KYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQG---LLRVQG--RPAAAYDDQG- 154 (304)
Q Consensus 83 ~i~vwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~--~~~~~~~~~~- 154 (304)
.+++|++.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||++++.... .+..+. ...+.++|++
T Consensus 84 ~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 163 (345)
T 3fm0_A 84 TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE 163 (345)
T ss_dssp CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS
T ss_pred cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC
Confidence 9999999876 4577888999999999999999999999999999999998764332 222222 2346677776
Q ss_pred -eEEEecCCCeEEEEe-----------cCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCc---------------e
Q 036585 155 -LVFGYEKGPLDIFSV-----------GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT---------------L 207 (304)
Q Consensus 155 -~~~~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~---------------~ 207 (304)
.+.+..++.+++|+. .+|...|.+++|+|++++|++++.|++|++||..... .
T Consensus 164 ~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 164 LLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp CEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred EEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 445667788888754 4688899999999999999999999999999964321 1
Q ss_pred eEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCce---------eeeeeccCCCCceEEeCCCC-cEEEE
Q 036585 208 LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKE---------VASWMSFDTEPPVIKWAPGS-LMFVT 277 (304)
Q Consensus 208 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~---------~~~~~~~~~~i~~~~~~~~~-~~l~s 277 (304)
+..+. ..|...|.+++|+|++..|++++.|+.|++|+...... .....+|...|++++|+|++ .+|++
T Consensus 244 ~~~~~--~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS 321 (345)
T 3fm0_A 244 ICTLS--GFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLAS 321 (345)
T ss_dssp EEEEC--SSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEE
T ss_pred eEEec--CCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEE
Confidence 22222 23778999999999999999999999999999875431 11235789999999999998 59999
Q ss_pred ecCc--eEEeccCCcc
Q 036585 278 GSSE--LSFWIPDLSK 291 (304)
Q Consensus 278 ~~~d--~~iw~~~~~~ 291 (304)
++.| +++|+...++
T Consensus 322 ~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 322 CSDDGEVAFWKYQRPE 337 (345)
T ss_dssp EETTSCEEEEEECC--
T ss_pred cCCCCcEEEEEecCCC
Confidence 9999 9999986644
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.8e-45 Score=292.43 Aligned_cols=253 Identities=19% Similarity=0.155 Sum_probs=207.9
Q ss_pred ecceeeEeecccCcEEEEeeCCCeEEEEecCC-----------cceeeeecccccceeEEEEccCCCeEEEEecCCCCCc
Q 036585 15 ELSEEILQSMEVGIYLVTASDDESIRLYDVTA-----------ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 83 (304)
Q Consensus 15 ~~~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~ 83 (304)
+.+-..+.+++||++|++++ |+++|+||... .........+..+|.+++|+|++ .+++++. ||.
T Consensus 30 ~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~---dg~ 104 (344)
T 4gqb_B 30 ERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASD---SGA 104 (344)
T ss_dssp CSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEET---TSE
T ss_pred cCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEEC---CCE
Confidence 34556789999999999888 66788887321 11112222356689999999985 6778887 999
Q ss_pred eEEEEccCceeeee----cccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEe
Q 036585 84 LRLLSLHDNKYSRY----FKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGY 159 (304)
Q Consensus 84 i~vwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (304)
|+|||+.+++.+.. +.+|.+.|.+++|+|++++|++++.|++|++||+++++.+..+.
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~------------------ 166 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYR------------------ 166 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC------------------
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEc------------------
Confidence 99999998875543 34799999999999999999999999999999999887765543
Q ss_pred cCCCeEEEEecCCCCCceEEEEecCCc-EEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcC-CCcEEEEec
Q 036585 160 EKGPLDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP-EGMFVISGS 237 (304)
Q Consensus 160 ~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~ 237 (304)
+|...|.+++|+|++. +|++++.|++|++||+++++....+... .+...+++++|+| ++++|++|+
T Consensus 167 -----------~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 167 -----------AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS-APGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp -----------CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-----CCCEEEEEECSSCTTEEEEEE
T ss_pred -----------CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc-eeeccceeeeecCCCCcceEEec
Confidence 6888999999999985 7889999999999999999888776432 3556789999999 467889999
Q ss_pred CCCcEEEEecCCCceeeeeeccCCCCceEEeCCCC-cEEEEecCc--eEEeccCCccccccccCCCCC
Q 036585 238 GDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGS-LMFVTGSSE--LSFWIPDLSKLGAYVGRNRGC 302 (304)
Q Consensus 238 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s~~~d--~~iw~~~~~~~~~~~~~~~g~ 302 (304)
.||.|++||+++++++..+.+|...|++++|+|++ ++|++++.| ++||+.+..++..+.+|...+
T Consensus 235 ~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V 302 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFV 302 (344)
T ss_dssp TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCE
T ss_pred cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCE
Confidence 99999999999999999999999999999999998 579999998 999999988888888887654
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.8e-43 Score=303.97 Aligned_cols=280 Identities=16% Similarity=0.246 Sum_probs=227.1
Q ss_pred eeccee---eEeecccCc-EEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEc
Q 036585 14 LELSEE---ILQSMEVGI-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL 89 (304)
Q Consensus 14 ~~~~~~---~i~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~ 89 (304)
+.+|.. .+.++|++. +|++++.|++|++||..+++.+..+.+|...|.+++|+|++++|++++. |++|++||+
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~---D~~i~lwd~ 219 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGG---DGTIVLYNG 219 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEET
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEEC---CCcEEEEEC
Confidence 445543 467888886 6999999999999999999999999999999999999999999999998 999999999
Q ss_pred cCceeeeecc-------cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEe-------------------
Q 036585 90 HDNKYSRYFK-------GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ------------------- 143 (304)
Q Consensus 90 ~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------------- 143 (304)
.+++....+. +|.+.|.+++|+|++++|++++.|++|++||+++++....+...
T Consensus 220 ~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 299 (611)
T 1nr0_A 220 VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVS 299 (611)
T ss_dssp TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEE
T ss_pred CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEE
Confidence 9998887774 79999999999999999999999999999999987665443210
Q ss_pred --------------------------ccceeEecCCCeE--EEecCCCeEEEEecC----------C-------------
Q 036585 144 --------------------------GRPAAAYDDQGLV--FGYEKGPLDIFSVGG----------D------------- 172 (304)
Q Consensus 144 --------------------------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~----------~------------- 172 (304)
....+++++++.. .+..++.+++|++.. |
T Consensus 300 ~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~ 379 (611)
T 1nr0_A 300 ISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG 379 (611)
T ss_dssp EETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS
T ss_pred EeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC
Confidence 1123556676633 355566777776431 1
Q ss_pred --------------------------------------------------------------------CCCceEEEEecC
Q 036585 173 --------------------------------------------------------------------ISDANVVKFSND 184 (304)
Q Consensus 173 --------------------------------------------------------------------~~~v~~~~~~~~ 184 (304)
...+.+++|+|+
T Consensus 380 ~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spd 459 (611)
T 1nr0_A 380 DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND 459 (611)
T ss_dssp CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTT
T ss_pred cEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCC
Confidence 123567899999
Q ss_pred CcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCC-Cceeee--eeccCC
Q 036585 185 GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRS-GKEVAS--WMSFDT 261 (304)
Q Consensus 185 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~-~~~~~~--~~~~~~ 261 (304)
|++|++|+.|++|++||+.+++...... ..|...|++++|+|+|++|++++.|+.|++||+.+ ++.+.. +..|..
T Consensus 460 g~~lasgs~D~~v~lwd~~~~~~~~~~~--~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~ 537 (611)
T 1nr0_A 460 KQFVAVGGQDSKVHVYKLSGASVSEVKT--IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTA 537 (611)
T ss_dssp SCEEEEEETTSEEEEEEEETTEEEEEEE--EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSS
T ss_pred CCEEEEeCCCCeEEEEEccCCceeeeec--cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeeccc
Confidence 9999999999999999998765432111 15889999999999999999999999999999987 555443 345999
Q ss_pred CCceEEeCCCCcEEEEecCc--eEEeccCCcc--c-cccccC
Q 036585 262 EPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK--L-GAYVGR 298 (304)
Q Consensus 262 ~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~--~-~~~~~~ 298 (304)
.|++++|+||+++|++++.| +++|+++... + ..+.+|
T Consensus 538 ~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h 579 (611)
T 1nr0_A 538 KVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAH 579 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSS
T ss_pred ceeEEEECCCCCEEEEEECCCcEEEEECCCcccccchhhccC
Confidence 99999999999999999999 9999997533 2 445566
No 16
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.9e-43 Score=275.05 Aligned_cols=244 Identities=14% Similarity=0.168 Sum_probs=203.2
Q ss_pred eeccee---eEeecccCcEEEEeeCCCeEEEEecCC--cceeeeecccccceeEEEEccC--CCeEEEEecCCCCCceEE
Q 036585 14 LELSEE---ILQSMEVGIYLVTASDDESIRLYDVTA--ATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGWDESLRL 86 (304)
Q Consensus 14 ~~~~~~---~i~~~~~~~~l~~~~~d~~i~vw~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~d~~i~v 86 (304)
+.+|.. .+.++++|++||+|+.|++|+|||+.+ .+.+.++.+|..+|.+++|+++ ++.|++++. |++|++
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~---D~~v~i 81 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGKVMI 81 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEET---TTEEEE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcC---CCEEEE
Confidence 444554 367889999999999999999999974 4678899999999999999864 889999998 999999
Q ss_pred EEccCce--eeeecccccccEEEEEEcCC--CCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCC
Q 036585 87 LSLHDNK--YSRYFKGHHDRVVLLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKG 162 (304)
Q Consensus 87 wd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (304)
||+++++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||+++.......
T Consensus 82 Wd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~---------------------- 139 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPI---------------------- 139 (297)
T ss_dssp EEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCE----------------------
T ss_pred EEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeee----------------------
Confidence 9999874 55667789999999999997 889999999999999999875322111
Q ss_pred CeEEEEecCCCCCceEEEEecC-------------CcEEEEeeCCCeEEEEEcCCCc----eeEEEEeCCCCCCcceEEE
Q 036585 163 PLDIFSVGGDISDANVVKFSND-------------GRLMLLTTMEGHIHVLDSFRGT----LLSTYNVKPVSRNSTLEAS 225 (304)
Q Consensus 163 ~~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~dg~i~~~d~~~~~----~~~~~~~~~~~~~~i~~~~ 225 (304)
.+.+|...|.+++|+|+ +++|++|+.|++|++||+++++ ....+. +|...|.+++
T Consensus 140 -----~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~---~H~~~V~~v~ 211 (297)
T 2pm7_B 140 -----IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE---GHSDWVRDVA 211 (297)
T ss_dssp -----EEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC---CCSSCEEEEE
T ss_pred -----eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec---CCCCceEEEE
Confidence 11257788999999986 5789999999999999998766 334444 6899999999
Q ss_pred EcCCC---cEEEEecCCCcEEEEecCCCce---eeee--eccCCCCceEEeCCCCcEEEEecCc--eEEeccCCc
Q 036585 226 FSPEG---MFVISGSGDGSVHAWSVRSGKE---VASW--MSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLS 290 (304)
Q Consensus 226 ~s~~~---~~l~~~~~dg~i~v~d~~~~~~---~~~~--~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~ 290 (304)
|+|++ ++|++++.|+.|++||+++... ...+ ..|...|.+++|+|++++|++++.| ++||+.+.+
T Consensus 212 ~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 212 WSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp ECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred ECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 99984 8999999999999999977431 1222 4678899999999999999999998 999987643
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.4e-43 Score=299.85 Aligned_cols=272 Identities=15% Similarity=0.181 Sum_probs=228.2
Q ss_pred ecceeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCce-
Q 036585 15 ELSEEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK- 93 (304)
Q Consensus 15 ~~~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~- 93 (304)
++....+.++|+|++|++++ ++.|++|++.+++....+.+|...|.+++|+|++++|++++. |++|+|||+.+++
T Consensus 18 ~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~---d~~v~lWd~~~~~~ 93 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDV---HGNVRIWDTTQTTH 93 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEESSSTTC
T ss_pred cCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeC---CCCEEEeECCCCcc
Confidence 45566788999999999998 569999999999999999999999999999999999999998 9999999997543
Q ss_pred -eeeecccccccEEEEEEcCCCCEEEEcccC----CeEEEEeCCcceeeceEEEec--cceeEecCCC---eEEEecCCC
Q 036585 94 -YSRYFKGHHDRVVLLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQG---LVFGYEKGP 163 (304)
Q Consensus 94 -~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~ 163 (304)
....+.+|.++|.+++|+|++++|++++.+ +.|++||.. +....+..+. ...+.++|++ .+.+..++.
T Consensus 94 ~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~--~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~ 171 (611)
T 1nr0_A 94 ILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTG--TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNT 171 (611)
T ss_dssp CEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTC--CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSC
T ss_pred eeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCC--CCcceecCCCCCceEEEECCCCCeEEEEEeCCCe
Confidence 345677899999999999999999988765 478888853 3333333332 2356778775 455777888
Q ss_pred eEEEEe---------cCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeC----CCCCCcceEEEEcCCC
Q 036585 164 LDIFSV---------GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK----PVSRNSTLEASFSPEG 230 (304)
Q Consensus 164 ~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~----~~~~~~i~~~~~s~~~ 230 (304)
+++|+. .+|...|.+++|+|+|++|++++.|++|++||+.+++....+... ..|...|.+++|+|++
T Consensus 172 v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 172 VAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp EEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred EEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 888864 468899999999999999999999999999999999887766311 1488899999999999
Q ss_pred cEEEEecCCCcEEEEecCCCceee-------------------------------------------eeeccCCCCceEE
Q 036585 231 MFVISGSGDGSVHAWSVRSGKEVA-------------------------------------------SWMSFDTEPPVIK 267 (304)
Q Consensus 231 ~~l~~~~~dg~i~v~d~~~~~~~~-------------------------------------------~~~~~~~~i~~~~ 267 (304)
++|++++.|++|++||+++++++. .+.+|...|++++
T Consensus 252 ~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~ 331 (611)
T 1nr0_A 252 TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALS 331 (611)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEE
Confidence 999999999999999998876543 2347889999999
Q ss_pred eCCCCcEEEEecCc--eEEeccCCccc
Q 036585 268 WAPGSLMFVTGSSE--LSFWIPDLSKL 292 (304)
Q Consensus 268 ~~~~~~~l~s~~~d--~~iw~~~~~~~ 292 (304)
|+|++++|++++.| +++|++.....
T Consensus 332 ~spdg~~l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 332 SSADGKTLFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred EeCCCCEEEEEeCCCcEEEEECCCCce
Confidence 99999999999999 99999876543
No 18
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-41 Score=274.61 Aligned_cols=274 Identities=14% Similarity=0.194 Sum_probs=238.3
Q ss_pred ceeeeecceee---EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEE
Q 036585 10 DKVSLELSEEI---LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 86 (304)
Q Consensus 10 ~~~~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~v 86 (304)
....+.+|... +.+++++++|++++.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++. |+.|++
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~i 100 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA---DYSIKL 100 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TTEEEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC---CCeEEE
Confidence 34556777654 667889999999999999999999999999999999999999999999999999998 999999
Q ss_pred EEccCceeeeecccccccEEEEEEcCCCCEEEEcccC-----CeEEEEeCCcceeeceEEEe---------------ccc
Q 036585 87 LSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLLRVQ---------------GRP 146 (304)
Q Consensus 87 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~---------------~~~ 146 (304)
||+.+++.+..+. +...+.+++|+|+++++++++.+ +.|++||++.......+... ...
T Consensus 101 wd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (369)
T 3zwl_B 101 WDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAAT 179 (369)
T ss_dssp EETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEE
T ss_pred EECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcccee
Confidence 9999999888887 88899999999999999999998 99999999876543332211 222
Q ss_pred eeEecCCC--eEEEecCCCeEEEEec----------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeC
Q 036585 147 AAAYDDQG--LVFGYEKGPLDIFSVG----------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK 214 (304)
Q Consensus 147 ~~~~~~~~--~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 214 (304)
.+.+++++ .+.+..++.+.+|++. .|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 180 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-- 257 (369)
T 3zwl_B 180 VAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-- 257 (369)
T ss_dssp EEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--
T ss_pred EEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec--
Confidence 45566665 3445566777777664 477899999999999999999999999999999999988887
Q ss_pred CCCCCcceEEEEcCCCcEEEEecCCC--------------cEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecC
Q 036585 215 PVSRNSTLEASFSPEGMFVISGSGDG--------------SVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSS 280 (304)
Q Consensus 215 ~~~~~~i~~~~~s~~~~~l~~~~~dg--------------~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~ 280 (304)
+...+..++|+|+++++++++.++ .+++||+.+++.+..+.+|...|++++|+|++++|++++.
T Consensus 258 --~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 335 (369)
T 3zwl_B 258 --TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGE 335 (369)
T ss_dssp --CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred --CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcC
Confidence 678899999999999999999888 8999999999999999999999999999999999999999
Q ss_pred c--eEEeccCCcc
Q 036585 281 E--LSFWIPDLSK 291 (304)
Q Consensus 281 d--~~iw~~~~~~ 291 (304)
| +++|+++...
T Consensus 336 dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 336 DGFIRLHHFEKSY 348 (369)
T ss_dssp TSEEEEEEECHHH
T ss_pred CCeEEEEECcccc
Confidence 8 9999987654
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-41 Score=269.91 Aligned_cols=276 Identities=17% Similarity=0.278 Sum_probs=206.9
Q ss_pred ceeeeecceeeEeecc-cCcEEEEeeCCCeEEEEecCCc--ceeeee-cc-cccceeEEEEccCCCeEEEEecCCCCCce
Q 036585 10 DKVSLELSEEILQSME-VGIYLVTASDDESIRLYDVTAA--TCLKTI-NS-KKYGVDLVCFTSHPTTVIYSSKNGWDESL 84 (304)
Q Consensus 10 ~~~~~~~~~~~i~~~~-~~~~l~~~~~d~~i~vw~~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 84 (304)
....+++|...|.... .+++|++++.|++|++||+.++ +.+..+ .+ |...|.+++|+|++++|++++. |+.|
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~---D~~v 82 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF---DSTV 82 (330)
T ss_dssp EEEEEECCSSCEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET---TSCE
T ss_pred cceeeccCCCceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC---CCcE
Confidence 4556777776554332 2349999999999999999875 445555 44 9999999999999999999998 9999
Q ss_pred EEEEccC-------ceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcc----eeeceEEEec--cceeEec
Q 036585 85 RLLSLHD-------NKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAE----KCQGLLRVQG--RPAAAYD 151 (304)
Q Consensus 85 ~vwd~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~----~~~~~~~~~~--~~~~~~~ 151 (304)
++||+.. .+.+..+.+|...|.+++|+|++++|++++.|++|++||++.. +....+..+. ...+.++
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~ 162 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWH 162 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEEC
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEEC
Confidence 9999853 3456778899999999999999999999999999999999533 2223333222 2356777
Q ss_pred CCCe--EEEecCCCeEEEEe-----------cCCCCCceEEEEecC--CcEEEEeeCCCeEEEEEcCCCce------eEE
Q 036585 152 DQGL--VFGYEKGPLDIFSV-----------GGDISDANVVKFSND--GRLMLLTTMEGHIHVLDSFRGTL------LST 210 (304)
Q Consensus 152 ~~~~--~~~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~------~~~ 210 (304)
|++. +.+..++.+++|+. .+|...|.+++|+|+ +..|++++.|++|++||++++.. ...
T Consensus 163 p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~ 242 (330)
T 2hes_X 163 PSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCE 242 (330)
T ss_dssp SSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEe
Confidence 7764 44667888888864 358889999999998 67899999999999999875421 111
Q ss_pred EEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCc--eeee-eeccCC-CCceEEeCC--CCcEEEEecCc--e
Q 036585 211 YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGK--EVAS-WMSFDT-EPPVIKWAP--GSLMFVTGSSE--L 282 (304)
Q Consensus 211 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~--~~~~-~~~~~~-~i~~~~~~~--~~~~l~s~~~d--~ 282 (304)
......|...|.+++|++++ +|++++.||.|++||..+++ .... +.+|.. .|++++|+| ++++|++++.| +
T Consensus 243 ~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v 321 (330)
T 2hes_X 243 AILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIV 321 (330)
T ss_dssp EECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEE
T ss_pred eecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcE
Confidence 11122378899999999765 89999999999999998764 2322 357876 899999999 78999999999 9
Q ss_pred EEeccCC
Q 036585 283 SFWIPDL 289 (304)
Q Consensus 283 ~iw~~~~ 289 (304)
+||+++.
T Consensus 322 ~~W~~~~ 328 (330)
T 2hes_X 322 NFWSLEK 328 (330)
T ss_dssp EEEEC--
T ss_pred EEEEecc
Confidence 9998753
No 20
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.3e-41 Score=265.96 Aligned_cols=246 Identities=14% Similarity=0.152 Sum_probs=215.5
Q ss_pred ceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEE
Q 036585 48 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVL 127 (304)
Q Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 127 (304)
+..+++.+|...|.+++|+|++++|++++. |+.|++||+.+++.+..+..|..+|.+++|+|++++|++++.|+.|+
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~---dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLY---SGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEET---TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcC---CCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 456788999999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred EEeCCcceeeceEEEeccc--eeEecCCC--eEEEecCCCeEEEEec----------CCCCCceEEEEec-CCcEEEEee
Q 036585 128 LWDQRAEKCQGLLRVQGRP--AAAYDDQG--LVFGYEKGPLDIFSVG----------GDISDANVVKFSN-DGRLMLLTT 192 (304)
Q Consensus 128 iwd~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~-~~~~l~~~~ 192 (304)
+||+++++....+..+... .+.++|++ .+.+..++.+++|++. +|...|.+++|+| ++..|++|+
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 9999999888777655443 56778877 3457778999999753 5788899999999 678999999
Q ss_pred CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcC--CCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCC
Q 036585 193 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP--EGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAP 270 (304)
Q Consensus 193 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~ 270 (304)
.|++|++||++++.....+.. .+...+..++|+| ++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p 238 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTT--GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEEC--CCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred CCCeEEEEECCCCCccceecc--CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC
Confidence 999999999988877666653 4567888899987 778999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCc--eEEeccCCccc-cccccC
Q 036585 271 GSLMFVTGSSE--LSFWIPDLSKL-GAYVGR 298 (304)
Q Consensus 271 ~~~~l~s~~~d--~~iw~~~~~~~-~~~~~~ 298 (304)
++++|++++.| +++|+....++ +.+..+
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (304)
T ss_dssp SSSEEEEEETTSCEEEEETTTCCEEEEECCS
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeeeccCC
Confidence 99999999999 99999876443 444443
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.4e-41 Score=287.32 Aligned_cols=284 Identities=20% Similarity=0.325 Sum_probs=234.8
Q ss_pred cceeeeecceee---EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceE
Q 036585 9 EDKVSLELSEEI---LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 85 (304)
Q Consensus 9 ~~~~~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 85 (304)
++...+++|... +.++|+|++||+++.|++|+|||. ++++++++.+|...|.+++|+|++++|++++. |+.|+
T Consensus 7 ~e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~---d~~i~ 82 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASD---DKTVK 82 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCEE
T ss_pred EEeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeC---CCEEE
Confidence 455678888765 568899999999999999999995 68899999999999999999999999999998 99999
Q ss_pred EEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEec-cceeEecCCCe--EEEecCC
Q 036585 86 LLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGL--VFGYEKG 162 (304)
Q Consensus 86 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~ 162 (304)
+||+ +++.+..+.+|...|.+++|+|++++|++++.|+.+++|+.............. .....+.+++. .......
T Consensus 83 vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 161 (577)
T 2ymu_A 83 LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDK 161 (577)
T ss_dssp EEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceeccccc
Confidence 9996 567888999999999999999999999999999999999976544322211111 11233444432 2222222
Q ss_pred C--------eEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEE
Q 036585 163 P--------LDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVI 234 (304)
Q Consensus 163 ~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 234 (304)
. ........+...+..+.++|+++++++++.||.|++||. +++....+. .|...+.+++|+|++++|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~---~~~~~v~~~~~s~dg~~l~ 237 (577)
T 2ymu_A 162 TVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT---GHSSSVRGVAFSPDGQTIA 237 (577)
T ss_dssp EEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE---CCSSCEEEEEECTTSSCEE
T ss_pred ceeccccceeeeeeccCCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEe---cCCCCEEEEEECCCCCEEE
Confidence 2 333444567889999999999999999999999999995 667777777 6889999999999999999
Q ss_pred EecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCccccccccCCCCC
Q 036585 235 SGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSKLGAYVGRNRGC 302 (304)
Q Consensus 235 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~~~~~~~~~~g~ 302 (304)
+++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.| +++|+.+.+.+..+.+|...+
T Consensus 238 ~~~~d~~i~~w~~-~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v 306 (577)
T 2ymu_A 238 SASDDKTVKLWNR-NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSV 306 (577)
T ss_dssp EEETTSCEEEECT-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCE
T ss_pred EEeCCCEEEEEeC-CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCe
Confidence 9999999999995 677888899999999999999999999999998 999998887777777776543
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-40 Score=285.27 Aligned_cols=272 Identities=20% Similarity=0.326 Sum_probs=235.5
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecc
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFK 99 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~ 99 (304)
.+.+.|++++|++++.|+.|++||. +++.+..+.+|...|.+++|+|+++.+++++. |+.|++||+... .+..+.
T Consensus 267 ~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~---d~~i~~w~~~~~-~~~~~~ 341 (577)
T 2ymu_A 267 GVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASD---DKTVKLWNRNGQ-HLQTLT 341 (577)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTSC-EEEEEC
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeC---CCeEEEEeCCCC-eeEEEe
Confidence 4678899999999999999999996 46788889999999999999999999999998 999999998654 456778
Q ss_pred cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEecc--ceeEecCCCe--EEEecCCCeEEEEe------
Q 036585 100 GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDDQGL--VFGYEKGPLDIFSV------ 169 (304)
Q Consensus 100 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~------ 169 (304)
+|...|.+++|+|+++++++++.|+.|++||.. ++....+..+.. ..+.+++++. +.+..++.+.+|+.
T Consensus 342 ~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~ 420 (577)
T 2ymu_A 342 GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQ 420 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT-CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCCEEE
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCC-CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCEEE
Confidence 899999999999999999999999999999954 455555543333 2466777763 44566777777753
Q ss_pred --cCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEec
Q 036585 170 --GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSV 247 (304)
Q Consensus 170 --~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~ 247 (304)
.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+. .|...+++++|+|++++|++++.|+.|++||.
T Consensus 421 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~---~~~~~v~~~~~spd~~~las~~~d~~i~iw~~ 496 (577)
T 2ymu_A 421 TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLT---GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 496 (577)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEE---CCSSCEEEEEECTTSCEEEEEETTSEEEEEET
T ss_pred EecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEc---CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC
Confidence 457889999999999999999999999999996 567777777 68899999999999999999999999999995
Q ss_pred CCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCccccccccCCCCC
Q 036585 248 RSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSKLGAYVGRNRGC 302 (304)
Q Consensus 248 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~~~~~~~~~~g~ 302 (304)
+++++..+.+|...|++++|+|++++|++++.| +++|+.+.+.+..+.+|...+
T Consensus 497 -~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~~~~~~~~~h~~~v 552 (577)
T 2ymu_A 497 -NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSV 552 (577)
T ss_dssp -TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCE
T ss_pred -CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCCCEEEEEcCCCCCE
Confidence 788899999999999999999999999999999 999999888888888887654
No 23
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.1e-41 Score=267.12 Aligned_cols=249 Identities=19% Similarity=0.304 Sum_probs=213.1
Q ss_pred ceeeeecccccceeEEEEccC----CCeEEEEecCCCCCceEEEEccCcee--eeecccccccEEEEEEcCCCCEEEEcc
Q 036585 48 TCLKTINSKKYGVDLVCFTSH----PTTVIYSSKNGWDESLRLLSLHDNKY--SRYFKGHHDRVVLLSLCSSKDCFISGS 121 (304)
Q Consensus 48 ~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~ 121 (304)
.....+++|.+.|.+++|+|+ +..|++++. |++|++|++.+++. ...+.+|...|.+++|+|++.++++++
T Consensus 23 ~~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~---D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s 99 (321)
T 3ow8_A 23 ILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSL---DDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS 99 (321)
T ss_dssp EEEEETTSSSSCEEEEEEC-------CEEEEEET---TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred heeeecccCCCcEEEEEEecCCCCCCCEEEEEcC---CCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe
Confidence 345567789999999999985 568999998 99999999987653 456789999999999999999999999
Q ss_pred cCCeEEEEeCCcceeeceEEEecc--ceeEecCCCeEE--EecCCCeEEEEec---------CCCCCceEEEEecCCcEE
Q 036585 122 LDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDDQGLVF--GYEKGPLDIFSVG---------GDISDANVVKFSNDGRLM 188 (304)
Q Consensus 122 ~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l 188 (304)
.|++|++||+++++....+..... ..+.++|++..+ +..++.+.+|++. .+...+.+++|+|++++|
T Consensus 100 ~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l 179 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYL 179 (321)
T ss_dssp TTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEE
T ss_pred CCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEE
Confidence 999999999999988777765433 357788887544 5566778887654 466789999999999999
Q ss_pred EEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEe
Q 036585 189 LLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKW 268 (304)
Q Consensus 189 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 268 (304)
++++.||.|++||+++++.+..+. .|..+|.+++|+|++++|++|+.|+.|++||+++++.+..+.+|...|.+++|
T Consensus 180 asg~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 256 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGKLLHTLE---GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF 256 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEEC---CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEcCCCeEEEEECCCCcEEEEEc---ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEE
Confidence 999999999999999999888887 68899999999999999999999999999999999999999999999999999
Q ss_pred CCCCcEEEEecCc--eEEeccCCc-cccccccCCCCC
Q 036585 269 APGSLMFVTGSSE--LSFWIPDLS-KLGAYVGRNRGC 302 (304)
Q Consensus 269 ~~~~~~l~s~~~d--~~iw~~~~~-~~~~~~~~~~g~ 302 (304)
+|++++|++++.| +++|++... .+..+.+|...+
T Consensus 257 sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v 293 (321)
T 3ow8_A 257 CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQV 293 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcE
Confidence 9999999999999 999999654 455666666543
No 24
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.4e-40 Score=266.41 Aligned_cols=271 Identities=18% Similarity=0.269 Sum_probs=221.8
Q ss_pred eeeeecceee---Eeeccc-CcEEEEeeCCCeEEEEecCCcc-----eeeeecccccceeEEEEccCCCeEEEEecCCCC
Q 036585 11 KVSLELSEEI---LQSMEV-GIYLVTASDDESIRLYDVTAAT-----CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD 81 (304)
Q Consensus 11 ~~~~~~~~~~---i~~~~~-~~~l~~~~~d~~i~vw~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d 81 (304)
..++++|.+. +.++|+ +++|+||+.|++|+|||+.+.+ +...+.+|...|.+++|+|++++|++++. |
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~---d 107 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSW---D 107 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEET---T
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcc---c
Confidence 4457788765 566776 6899999999999999987643 56778899999999999999999999998 9
Q ss_pred CceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEE-e--ccceeEecCCC----
Q 036585 82 ESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV-Q--GRPAAAYDDQG---- 154 (304)
Q Consensus 82 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~--~~~~~~~~~~~---- 154 (304)
+.|++|+............+...+..+.+++++++|++++.|+.+++||+........... + ......+.++.
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 187 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPI 187 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcE
Confidence 9999999999988888888888999999999999999999999999999876544322111 1 11223343332
Q ss_pred eEEEecCCCeEEEEe---------cCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEE
Q 036585 155 LVFGYEKGPLDIFSV---------GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 225 (304)
Q Consensus 155 ~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~ 225 (304)
.+.+..++.+++|++ .+|...|++++|+|++++|++++.||.|++||+++.+.+..+. +...+.+++
T Consensus 188 ~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~----~~~~v~~~~ 263 (340)
T 4aow_A 188 IVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD----GGDIINALC 263 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE----CSSCEEEEE
T ss_pred EEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeec----CCceEEeee
Confidence 233555667777754 4588899999999999999999999999999999999988887 557899999
Q ss_pred EcCCCcEEEEecCCCcEEEEecCCCceeeee---------eccCCCCceEEeCCCCcEEEEecCc--eEEeccCC
Q 036585 226 FSPEGMFVISGSGDGSVHAWSVRSGKEVASW---------MSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 226 ~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~---------~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~ 289 (304)
|+|++.++ +++.|+.|++||++++..+..+ .+|...|++++|+|++++|++|+.| ++||+++.
T Consensus 264 ~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~t 337 (340)
T 4aow_A 264 FSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTI 337 (340)
T ss_dssp ECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred cCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC
Confidence 99988655 4557999999999887765544 3688899999999999999999999 99998764
No 25
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.1e-42 Score=272.53 Aligned_cols=244 Identities=15% Similarity=0.183 Sum_probs=198.7
Q ss_pred eecceee---EeecccCcEEEEeeCCCeEEEEecCCcc--eeeeecccccceeEEEEcc--CCCeEEEEecCCCCCceEE
Q 036585 14 LELSEEI---LQSMEVGIYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWDESLRL 86 (304)
Q Consensus 14 ~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~d~~i~v 86 (304)
+.+|... +.++++|++||+|+.|++|++||+.+++ .+..+.+|..+|.+++|+| +++.|++++. |++|++
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~---D~~v~i 85 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY---DRKVII 85 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET---TSCEEE
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC---CCEEEE
Confidence 4455544 6788999999999999999999998764 4678899999999999986 4899999998 999999
Q ss_pred EEccCce--eeeecccccccEEEEEEcCC--CCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCC
Q 036585 87 LSLHDNK--YSRYFKGHHDRVVLLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKG 162 (304)
Q Consensus 87 wd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (304)
||+++++ ....+.+|...|.+++|+|+ +.+|++++.|+.|++||++.........
T Consensus 86 Wd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~--------------------- 144 (316)
T 3bg1_A 86 WREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK--------------------- 144 (316)
T ss_dssp ECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECC---------------------
T ss_pred EECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceee---------------------
Confidence 9999873 56677889999999999997 7899999999999999988653211000
Q ss_pred CeEEEEecCCCCCceEEEEecC-----------------CcEEEEeeCCCeEEEEEcCCCc---eeEEEEeCCCCCCcce
Q 036585 163 PLDIFSVGGDISDANVVKFSND-----------------GRLMLLTTMEGHIHVLDSFRGT---LLSTYNVKPVSRNSTL 222 (304)
Q Consensus 163 ~~~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~dg~i~~~d~~~~~---~~~~~~~~~~~~~~i~ 222 (304)
.+.+|...+.+++|+|+ +++|++++.|+.|++||++... ....+. .|...|.
T Consensus 145 -----~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~---~h~~~V~ 216 (316)
T 3bg1_A 145 -----INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE---AHSDWVR 216 (316)
T ss_dssp -----BTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB---CCSSCEE
T ss_pred -----eeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc---cCCCceE
Confidence 11256677888888887 4789999999999999997653 333343 6889999
Q ss_pred EEEEcCCC----cEEEEecCCCcEEEEecCCCc----eeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCC
Q 036585 223 EASFSPEG----MFVISGSGDGSVHAWSVRSGK----EVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 223 ~~~~s~~~----~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~ 289 (304)
+++|+|++ ++|++++.|++|++||+.+.. ....+..|...|.+++|+|++++|++++.| ++||+.+.
T Consensus 217 ~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 217 DVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 99999986 899999999999999997631 234456789999999999999999999999 99998763
No 26
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.8e-41 Score=292.72 Aligned_cols=269 Identities=19% Similarity=0.277 Sum_probs=222.4
Q ss_pred eeeecceeeEe---eccc-CcEEEEeeCCCeEEEEecCCc-----ceeeeecccccceeEEEEccCCCeEEEEecCCCCC
Q 036585 12 VSLELSEEILQ---SMEV-GIYLVTASDDESIRLYDVTAA-----TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE 82 (304)
Q Consensus 12 ~~~~~~~~~i~---~~~~-~~~l~~~~~d~~i~vw~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~ 82 (304)
..+++|.+.|. ++++ +++|++|+.|++|++|++.+. .....+.+|...|.+++|+|++++|++++. |+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~---Dg 452 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW---DG 452 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEET---TS
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeC---CC
Confidence 45677877654 4455 579999999999999998753 345678899999999999999999999998 99
Q ss_pred ceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEE-----eccceeEecCCC---
Q 036585 83 SLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV-----QGRPAAAYDDQG--- 154 (304)
Q Consensus 83 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~~~~~~~~~--- 154 (304)
.|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||+........... .....+.+++++
T Consensus 453 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 453 ELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred cEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 999999999999999999999999999999999999999999999999865433222110 112356677764
Q ss_pred -eEEEecCCCeEEEEec---------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEE
Q 036585 155 -LVFGYEKGPLDIFSVG---------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 224 (304)
Q Consensus 155 -~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~ 224 (304)
.+.+..++.+++|++. +|...|++++|+|++++|++++.||.|++||+++++.+..+. +...+.++
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~----~~~~v~~~ 608 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE----ANSVIHAL 608 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB----CSSCEEEE
T ss_pred eEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec----CCCcEEEE
Confidence 4567778899998754 588899999999999999999999999999999998877665 45789999
Q ss_pred EEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccC-------------------CCCceEEeCCCCcEEEEecCc--eE
Q 036585 225 SFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFD-------------------TEPPVIKWAPGSLMFVTGSSE--LS 283 (304)
Q Consensus 225 ~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-------------------~~i~~~~~~~~~~~l~s~~~d--~~ 283 (304)
+|+|++.+|++++ ++.|++||+++++.+..+..+. ..+++++|+|++++|++|+.| ++
T Consensus 609 ~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~ 687 (694)
T 3dm0_A 609 CFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIR 687 (694)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEE
Confidence 9999998888776 5569999999988776664321 136789999999999999999 89
Q ss_pred EeccC
Q 036585 284 FWIPD 288 (304)
Q Consensus 284 iw~~~ 288 (304)
||++.
T Consensus 688 iW~i~ 692 (694)
T 3dm0_A 688 VWGIG 692 (694)
T ss_dssp EEEC-
T ss_pred EEecc
Confidence 99864
No 27
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-41 Score=276.01 Aligned_cols=265 Identities=14% Similarity=0.216 Sum_probs=227.5
Q ss_pred eeEeecccCc-EEEEeeCCCeEEEEec----CCcc------eeeeecc----------cccceeEEEEccCCCeEEEEec
Q 036585 19 EILQSMEVGI-YLVTASDDESIRLYDV----TAAT------CLKTINS----------KKYGVDLVCFTSHPTTVIYSSK 77 (304)
Q Consensus 19 ~~i~~~~~~~-~l~~~~~d~~i~vw~~----~~~~------~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~ 77 (304)
..+.++|+|+ +|++++.||.|++|++ .+++ ....+.. |...|.+++|+|++++|++++.
T Consensus 49 ~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 128 (425)
T 1r5m_A 49 VSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVE 128 (425)
T ss_dssp SEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEET
T ss_pred EEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeC
Confidence 4588999999 9999999999999999 8877 4544444 6779999999999999999998
Q ss_pred CCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEec-------------
Q 036585 78 NGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG------------- 144 (304)
Q Consensus 78 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------- 144 (304)
|+.|++|| .+++.+..+..|...|.+++|+|++++|++++.|+.|++||+++++....+....
T Consensus 129 ---dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 129 ---NGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp ---TSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC--------------
T ss_pred ---CCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence 99999999 6677888899999999999999999999999999999999999888776654332
Q ss_pred ----cceeEecCCC-eEEEecCCCeEEEEec---------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEE
Q 036585 145 ----RPAAAYDDQG-LVFGYEKGPLDIFSVG---------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLST 210 (304)
Q Consensus 145 ----~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~ 210 (304)
...+.+.+++ .+.+..++.+.+|++. .|...+.+++|+|++++|++++.||.|++||+++++....
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 284 (425)
T 1r5m_A 205 DGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNC 284 (425)
T ss_dssp -CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEE
T ss_pred CcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceE
Confidence 2334455555 4456677888888754 4778899999999999999999999999999999988888
Q ss_pred EEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 211 YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 211 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
+. .+...+.+++|+|++ ++++++.|+.|++||+++++.+..+..|..+|.+++|+|++++|++++.| +++|++.
T Consensus 285 ~~---~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 285 FY---GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EC---CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred ec---CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 86 688899999999999 99999999999999999999999999999999999999999999999988 9999986
Q ss_pred Ccc
Q 036585 289 LSK 291 (304)
Q Consensus 289 ~~~ 291 (304)
...
T Consensus 361 ~~~ 363 (425)
T 1r5m_A 361 KLN 363 (425)
T ss_dssp HHH
T ss_pred CCc
Confidence 544
No 28
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.3e-41 Score=274.60 Aligned_cols=271 Identities=14% Similarity=0.189 Sum_probs=229.7
Q ss_pred eeeeecceee---EeecccCcEEEEeeCCCeEEEEecCCcc------eeeeecccccceeEEEEccC----C---CeEEE
Q 036585 11 KVSLELSEEI---LQSMEVGIYLVTASDDESIRLYDVTAAT------CLKTINSKKYGVDLVCFTSH----P---TTVIY 74 (304)
Q Consensus 11 ~~~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~l~~ 74 (304)
...+++|... +.+++ ++|++++.||.|++||+.+++ .+..+.+|...|.+++|+|+ + ++|++
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 3445566654 44555 899999999999999999887 78888999999999999999 9 99999
Q ss_pred EecCCCCCceEEEEccCcee-----eeecccc-----cccEEEEEEc----CCCCE-EEEcccCCeEEEEeCCc------
Q 036585 75 SSKNGWDESLRLLSLHDNKY-----SRYFKGH-----HDRVVLLSLC----SSKDC-FISGSLDRTVLLWDQRA------ 133 (304)
Q Consensus 75 ~~~~~~d~~i~vwd~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~dg~i~iwd~~~------ 133 (304)
++. |+.|++||+.+++. ...+..| ...|.+++|+ |++++ |++++.||.|++||+++
T Consensus 87 ~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 87 TSF---SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EET---TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EcC---CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 998 99999999998886 7888888 5899999999 99999 99999999999999998
Q ss_pred ceeec-----eEEE---------eccceeEecCCC-eEEEecCCCeEEEEec---------C---C---CCCceEEEEec
Q 036585 134 EKCQG-----LLRV---------QGRPAAAYDDQG-LVFGYEKGPLDIFSVG---------G---D---ISDANVVKFSN 183 (304)
Q Consensus 134 ~~~~~-----~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~---~---~~~v~~~~~~~ 183 (304)
++... .+.. .....+.+++++ .+.+..++.+.+|++. . | ...+.+++|+|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~ 243 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 243 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECS
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECC
Confidence 66555 4432 223457788776 2224556777777653 4 6 88999999999
Q ss_pred CCcEEEEeeCC---CeEEEEEcCCCceeEEEEeCCC-------------CCCcceEEEEcCCCcEEEEecCCCcEEEEec
Q 036585 184 DGRLMLLTTME---GHIHVLDSFRGTLLSTYNVKPV-------------SRNSTLEASFSPEGMFVISGSGDGSVHAWSV 247 (304)
Q Consensus 184 ~~~~l~~~~~d---g~i~~~d~~~~~~~~~~~~~~~-------------~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~ 247 (304)
++++|++++.| |.|++||+++++.+..+. . |...|.+++|+|++++|++++.||.|++||+
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLS---VPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDV 320 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEEC---BC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceec---cCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 99999999999 999999999999888877 4 7889999999999999999999999999999
Q ss_pred CCCceeeeee------cc---------------CCCCceEEeCCCC----------cEEEEecCc--eEEeccCC
Q 036585 248 RSGKEVASWM------SF---------------DTEPPVIKWAPGS----------LMFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 248 ~~~~~~~~~~------~~---------------~~~i~~~~~~~~~----------~~l~s~~~d--~~iw~~~~ 289 (304)
++++++..+. +| ..+|++++|+|++ ++|++++.| +++|+++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 321 KTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred CCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 9999999998 78 9999999999998 799999988 99998764
No 29
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.6e-41 Score=275.26 Aligned_cols=246 Identities=19% Similarity=0.312 Sum_probs=217.9
Q ss_pred eeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEE
Q 036585 50 LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLW 129 (304)
Q Consensus 50 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 129 (304)
...+.+|..+|.+++|+|+++.+++++. |+.|++||+.+++....+.+|.+.|.+++|+|++++|++|+.|++|++|
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~---Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iw 177 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASE---DATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLW 177 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEES---SSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEE
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 4567899999999999999999999998 9999999999999999999999999999999999999999999999999
Q ss_pred eCCcceeeceEEEecc--ceeEecCCC--eEEEecCCCeEEEEec---------CCCCCceEEEEecCCcEEEEeeCCCe
Q 036585 130 DQRAEKCQGLLRVQGR--PAAAYDDQG--LVFGYEKGPLDIFSVG---------GDISDANVVKFSNDGRLMLLTTMEGH 196 (304)
Q Consensus 130 d~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~dg~ 196 (304)
|+++.+....+..+.. ..+.+.+++ .+.+..++.+++|++. +|...+.++.++|++.+|++++.||.
T Consensus 178 d~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 178 DFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp ETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 9998887766654433 356677776 4456778889888754 57888999999999999999999999
Q ss_pred EEEEEcCCCceeEEEEeCCCCCCcceEEEEcCC--------------------CcEEEEecCCCcEEEEecCCCceeeee
Q 036585 197 IHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE--------------------GMFVISGSGDGSVHAWSVRSGKEVASW 256 (304)
Q Consensus 197 i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~--------------------~~~l~~~~~dg~i~v~d~~~~~~~~~~ 256 (304)
|++||+++++....+. .|...|.+++|+|+ +.+|++|+.|+.|++||+++++++..+
T Consensus 258 v~vwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~ 334 (410)
T 1vyh_C 258 VRVWVVATKECKAELR---EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTL 334 (410)
T ss_dssp EEEEETTTCCEEEEEC---CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCceeeEec---CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEE
Confidence 9999999999888877 68899999999996 678999999999999999999999999
Q ss_pred eccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc-ccccccCCCC
Q 036585 257 MSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK-LGAYVGRNRG 301 (304)
Q Consensus 257 ~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~-~~~~~~~~~g 301 (304)
.+|...|++++|+|++++|++++.| +++|++...+ +..+.+|...
T Consensus 335 ~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~ 382 (410)
T 1vyh_C 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHF 382 (410)
T ss_dssp ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSC
T ss_pred ECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCc
Confidence 9999999999999999999999999 9999986543 5566666543
No 30
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-41 Score=277.13 Aligned_cols=267 Identities=15% Similarity=0.212 Sum_probs=227.4
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCC----cceeeeecccccceeEEEEccC-CCeEEEEecCCCCCceEEEEccCc
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTA----ATCLKTINSKKYGVDLVCFTSH-PTTVIYSSKNGWDESLRLLSLHDN 92 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~d~~i~vwd~~~~ 92 (304)
...+.+++++++|++++.||.|++||+.+ .+.+..+.+|...|.+++|+|+ +.+|++++. |+.|++||+.++
T Consensus 70 v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~ 146 (416)
T 2pm9_A 70 FNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN---NGEIFIWDMNKC 146 (416)
T ss_dssp EEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS---SSCEEBCBTTTT
T ss_pred eEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC---CCeEEEEECCCC
Confidence 34578899999999999999999999987 4578889999999999999998 889999998 999999999987
Q ss_pred e------eee---ecccccccEEEEEEcCC-CCEEEEcccCCeEEEEeCCcceeeceEEEe--------ccceeEecCCC
Q 036585 93 K------YSR---YFKGHHDRVVLLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQ--------GRPAAAYDDQG 154 (304)
Q Consensus 93 ~------~~~---~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------~~~~~~~~~~~ 154 (304)
+ ... .+..|...|.+++|+|+ +.+|++++.|+.|++||+++++....+... ....+.+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 226 (416)
T 2pm9_A 147 TESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKN 226 (416)
T ss_dssp SSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSC
T ss_pred ccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCC
Confidence 6 332 24678999999999998 789999999999999999998887776543 23356788875
Q ss_pred ---eEEEecCC---CeEEEEec-----------CCCCCceEEEEec-CCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCC
Q 036585 155 ---LVFGYEKG---PLDIFSVG-----------GDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV 216 (304)
Q Consensus 155 ---~~~~~~~~---~~~~~~~~-----------~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 216 (304)
.+.+..++ .+.+|++. +|...|.+++|+| ++++|++++.||.|++||+++++.+..+. .
T Consensus 227 ~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~---~ 303 (416)
T 2pm9_A 227 STRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP---A 303 (416)
T ss_dssp TTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE---C
T ss_pred CCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec---C
Confidence 34455566 89999864 4667899999999 99999999999999999999999999888 6
Q ss_pred CCCcceEEEEcCCC-cEEEEecCCCcEEEEecCCCceeeeee-----------------------------------ccC
Q 036585 217 SRNSTLEASFSPEG-MFVISGSGDGSVHAWSVRSGKEVASWM-----------------------------------SFD 260 (304)
Q Consensus 217 ~~~~i~~~~~s~~~-~~l~~~~~dg~i~v~d~~~~~~~~~~~-----------------------------------~~~ 260 (304)
|...+.+++|+|++ .+|++++.|+.|++||+.+.+...... .|.
T Consensus 304 ~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (416)
T 2pm9_A 304 RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYG 383 (416)
T ss_dssp SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTC
T ss_pred CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCcccc
Confidence 88999999999998 899999999999999998765432221 166
Q ss_pred CCCceEEeCCCCcEEEEecCc--eEEeccCCc
Q 036585 261 TEPPVIKWAPGSLMFVTGSSE--LSFWIPDLS 290 (304)
Q Consensus 261 ~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~ 290 (304)
.++.+++|+|+|++|++++.| ++||++..+
T Consensus 384 ~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 384 EPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred CCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 788899999999999999988 999998754
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.1e-39 Score=260.90 Aligned_cols=259 Identities=12% Similarity=0.173 Sum_probs=222.0
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceeee---ec--ccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCce-
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLKT---IN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK- 93 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~---~~--~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~- 93 (304)
.+.+++++++|++++ ||.|++||+.+++.... +. .|...|.+++|+|+++.+++++. |+.|++||+.+++
T Consensus 56 ~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~ 131 (337)
T 1gxr_A 56 AVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE---ASTLSIWDLAAPTP 131 (337)
T ss_dssp EEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES---SSEEEEEECCCC--
T ss_pred EEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC---CCcEEEEECCCCCc
Confidence 477889999999999 99999999987654333 33 68889999999999999999998 9999999999877
Q ss_pred -eeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEecc--ceeEecCCC--eEEEecCCCeEEEE
Q 036585 94 -YSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDDQG--LVFGYEKGPLDIFS 168 (304)
Q Consensus 94 -~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~ 168 (304)
....+..|...|.+++|+|+++++++++.|+.|++||+++++....+..+.. ..+.+++++ .+.+..++.+.+|+
T Consensus 132 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d 211 (337)
T 1gxr_A 132 RIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD 211 (337)
T ss_dssp EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEE
Confidence 5667778999999999999999999999999999999999887776654333 346677776 44466788888888
Q ss_pred ecC--------CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCC
Q 036585 169 VGG--------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 240 (304)
Q Consensus 169 ~~~--------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 240 (304)
+.. +...+.+++|+|+++++++++.+|.|++||+++++... +. .+...+.+++|+|++++|++++.||
T Consensus 212 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~---~~~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 212 LREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LH---LHESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp TTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE-EC---CCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE-Ec---CCccceeEEEECCCCCEEEEecCCC
Confidence 653 56789999999999999999999999999999887543 33 5888999999999999999999999
Q ss_pred cEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEecc
Q 036585 241 SVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIP 287 (304)
Q Consensus 241 ~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~ 287 (304)
.|++||+.+++.+... .|...+.+++|+|++++|++++.| +++|++
T Consensus 288 ~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 288 LLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred cEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 9999999998887544 588999999999999999999998 899975
No 32
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-39 Score=256.89 Aligned_cols=271 Identities=17% Similarity=0.260 Sum_probs=228.4
Q ss_pred cceeeeecceee---EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceE
Q 036585 9 EDKVSLELSEEI---LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLR 85 (304)
Q Consensus 9 ~~~~~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~ 85 (304)
+....+.+|... +.+ +++++|++++.||.|++||+.+++....+..|...|.+++|+|+++.+++++. |+.|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~ 84 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGK---DTMIN 84 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEET---TSCEE
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecC---CCeEE
Confidence 445567777655 455 78999999999999999999999999999999999999999999999999998 99999
Q ss_pred EEEccCc---eeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccce--eEe---cCCCeEE
Q 036585 86 LLSLHDN---KYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPA--AAY---DDQGLVF 157 (304)
Q Consensus 86 vwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~---~~~~~~~ 157 (304)
+|++... +.+..+.+|...|.++.| +++++++++.|+.|++|| ..+....+..+.... +.+ +.+..+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 85 GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEE
T ss_pred EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEE
Confidence 9998764 557778889999999999 577999999999999999 444444444433332 333 3344566
Q ss_pred EecCCCeEEEEec-------C-CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCC
Q 036585 158 GYEKGPLDIFSVG-------G-DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 229 (304)
Q Consensus 158 ~~~~~~~~~~~~~-------~-~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 229 (304)
+..++.+.+|+.. . +...+.+++|+|++. +++++.||.|++||+++++.+..+. .|...+++++|+|+
T Consensus 161 ~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 161 ASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE---GHESFVYCIKLLPN 236 (313)
T ss_dssp EETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEEECTT
T ss_pred EECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhh---cCCceEEEEEEecC
Confidence 7778888888643 3 788999999999998 9999999999999999999999888 68899999999999
Q ss_pred CcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcccc
Q 036585 230 GMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSKLG 293 (304)
Q Consensus 230 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~~~ 293 (304)
+ .|++++.||.|++||+++++++..+..|..+|.+++|+|+++++ +++.| +++|+++..++.
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDII-VGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEE-EEETTSCEEEEESCGGGCC
T ss_pred C-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEE-EEeCCCcEEEEeCCCCcee
Confidence 9 58899999999999999999999999999999999999999855 46666 999999876653
No 33
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.7e-42 Score=280.37 Aligned_cols=238 Identities=14% Similarity=0.118 Sum_probs=200.0
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCc--ceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCce--
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAA--TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK-- 93 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~-- 93 (304)
...+.++|+|++|++++.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++. |+.|++||+.+++
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQ---DRNAYVYEKRPDGTW 90 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEET---TSSEEEC------CC
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeC---CCeEEEEEcCCCCce
Confidence 446789999999999999999999999988 788899999999999999999999999998 9999999999877
Q ss_pred -eeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecC-
Q 036585 94 -YSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGG- 171 (304)
Q Consensus 94 -~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 171 (304)
....+..|...|.+++|+|++++|++++.|+.|++||+++++...... .+..
T Consensus 91 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~--------------------------~~~~~ 144 (377)
T 3dwl_C 91 KQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSK--------------------------HLKRP 144 (377)
T ss_dssp CCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCE--------------------------EECSS
T ss_pred eeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeee--------------------------Eeecc
Confidence 667778899999999999999999999999999999998876321111 1123
Q ss_pred CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCC------------------ceeEEEEeCCCCCCcceEEEEcCCCcEE
Q 036585 172 DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG------------------TLLSTYNVKPVSRNSTLEASFSPEGMFV 233 (304)
Q Consensus 172 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~------------------~~~~~~~~~~~~~~~i~~~~~s~~~~~l 233 (304)
|...|.+++|+|++++|++++.||.|++||++.. +....+ .|...|.+++|+|++++|
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l 220 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY----PSGGWVHAVGFSPSGNAL 220 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC----CCSSSEEEEEECTTSSCE
T ss_pred cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc----cCCceEEEEEECCCCCEE
Confidence 7789999999999999999999999999998632 222222 588899999999999999
Q ss_pred EEecCCCcEEEEecCCCce----eeeeeccCCCCceEEeCCCCcEEEEecCc-eEEeccC
Q 036585 234 ISGSGDGSVHAWSVRSGKE----VASWMSFDTEPPVIKWAPGSLMFVTGSSE-LSFWIPD 288 (304)
Q Consensus 234 ~~~~~dg~i~v~d~~~~~~----~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-~~iw~~~ 288 (304)
++++.||.|++||+++++. +..+.+|..+|.+++|+|++++|++++.+ +.+|...
T Consensus 221 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 221 AYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp EEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred EEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 9999999999999999887 78889999999999999999999999988 7788775
No 34
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.3e-40 Score=270.65 Aligned_cols=262 Identities=14% Similarity=0.169 Sum_probs=221.1
Q ss_pred EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccc
Q 036585 21 LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKG 100 (304)
Q Consensus 21 i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 100 (304)
..+++++++|++++.||.|++||+.+++....+.+|...|.+++|+|++++|++++. |+.|++||+.+++.+..+.+
T Consensus 103 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---d~~i~iwd~~~~~~~~~~~~ 179 (420)
T 3vl1_A 103 DTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ---DMQLKIWSVKDGSNPRTLIG 179 (420)
T ss_dssp EEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTCCCCEEEEC
T ss_pred EEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC---CCeEEEEeCCCCcCceEEcC
Confidence 356789999999999999999999999999888999999999999999999999998 99999999999999999999
Q ss_pred ccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEe--------------------------ccceeEecCCC
Q 036585 101 HHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ--------------------------GRPAAAYDDQG 154 (304)
Q Consensus 101 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------------------~~~~~~~~~~~ 154 (304)
|...|.+++|+|++++|++++.|+.|++||+++++....+... ....+.+++++
T Consensus 180 h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 180 HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 9999999999999999999999999999999998877766531 11124456666
Q ss_pred --eEEEecCCCeEEEEec----------CCCCCceEEEEecCCc-EEEEeeCCCeEEEEEcCCCce-eEEEEeCCCCCCc
Q 036585 155 --LVFGYEKGPLDIFSVG----------GDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTL-LSTYNVKPVSRNS 220 (304)
Q Consensus 155 --~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~-~~~~~~~~~~~~~ 220 (304)
.+.+..++.+.+|++. .|...+.+++|+|+++ +|++++.||.|++||+++++. +..+.. .+...
T Consensus 260 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~--~~~~~ 337 (420)
T 3vl1_A 260 KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI--NEGTP 337 (420)
T ss_dssp EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE--STTSC
T ss_pred CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc--cCCCC
Confidence 3446678889998764 3667899999999999 999999999999999998754 566663 25667
Q ss_pred ceEEEEcCCCcEEEEecCCCcEEEEecCCCc---------eeeeeeccCCCCceEEeCCCCc----EEEEecCc-eEEec
Q 036585 221 TLEASFSPEGMFVISGSGDGSVHAWSVRSGK---------EVASWMSFDTEPPVIKWAPGSL----MFVTGSSE-LSFWI 286 (304)
Q Consensus 221 i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~---------~~~~~~~~~~~i~~~~~~~~~~----~l~s~~~d-~~iw~ 286 (304)
+.++.+ +++++|++++.|+.|++||+.+.. ....+..|...|.+++|+|++. ++++|+.+ +.+|+
T Consensus 338 v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 338 INNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYN 416 (420)
T ss_dssp EEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEE
T ss_pred ceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEe
Confidence 887755 678899999999999999997732 2234567889999999999998 66666666 99998
Q ss_pred cC
Q 036585 287 PD 288 (304)
Q Consensus 287 ~~ 288 (304)
++
T Consensus 417 ~~ 418 (420)
T 3vl1_A 417 LS 418 (420)
T ss_dssp SC
T ss_pred cc
Confidence 75
No 35
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-40 Score=267.56 Aligned_cols=248 Identities=13% Similarity=0.166 Sum_probs=210.2
Q ss_pred eeeecceee---EeecccCcEEEEeeCCCeEEEEecC--CcceeeeecccccceeEEEEccC--CCeEEEEecCCCCCce
Q 036585 12 VSLELSEEI---LQSMEVGIYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGWDESL 84 (304)
Q Consensus 12 ~~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~d~~i 84 (304)
..+++|... +.+++++++|++++.||.|++||+. +++.+..+.+|...|.+++|+++ +.+|++++. |+.|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~---dg~v 81 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGKV 81 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET---TSCE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc---CCEE
Confidence 345566554 5678999999999999999999998 66778889999999999999987 899999998 9999
Q ss_pred EEEEccCce--eeeecccccccEEEEEEcCC--CCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEec
Q 036585 85 RLLSLHDNK--YSRYFKGHHDRVVLLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYE 160 (304)
Q Consensus 85 ~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (304)
++||+.+++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||++.........
T Consensus 82 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~------------------- 142 (379)
T 3jrp_A 82 LIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII------------------- 142 (379)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEE-------------------
T ss_pred EEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEE-------------------
Confidence 999999987 67778889999999999999 9999999999999999998875433332
Q ss_pred CCCeEEEEecCCCCCceEEEEec-------------CCcEEEEeeCCCeEEEEEcCCCceeEEE-EeCCCCCCcceEEEE
Q 036585 161 KGPLDIFSVGGDISDANVVKFSN-------------DGRLMLLTTMEGHIHVLDSFRGTLLSTY-NVKPVSRNSTLEASF 226 (304)
Q Consensus 161 ~~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~i~~~~~ 226 (304)
+..|...|.+++|+| ++.+|++++.||.|++||+++++..... .....|...|.+++|
T Consensus 143 --------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
T 3jrp_A 143 --------IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 214 (379)
T ss_dssp --------EECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred --------ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence 225778899999999 6999999999999999999876543222 122268899999999
Q ss_pred cCC---CcEEEEecCCCcEEEEecCCCc-----eeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCC
Q 036585 227 SPE---GMFVISGSGDGSVHAWSVRSGK-----EVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 227 s~~---~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~ 289 (304)
+|+ +++|++++.||.|++||+++++ .+.....|...|++++|+|++++|++++.| +++|+++.
T Consensus 215 sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 215 SPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 999 8999999999999999998864 222234588899999999999999999988 99999863
No 36
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=7e-40 Score=262.95 Aligned_cols=256 Identities=10% Similarity=0.143 Sum_probs=214.7
Q ss_pred eeccee---eEeecccCcEEEEeeCCCeEEEEecCCc----ceeeeecccccceeEEEEcc--CCCeEEEEecCCCCCce
Q 036585 14 LELSEE---ILQSMEVGIYLVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTS--HPTTVIYSSKNGWDESL 84 (304)
Q Consensus 14 ~~~~~~---~i~~~~~~~~l~~~~~d~~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~~~~d~~i 84 (304)
+.+|.. .+.+++++++|++++.||.|++||+.++ +....+.+|...|.+++|+| ++++|++++. |+.|
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~---dg~v 83 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASY---DKTV 83 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEET---TSCE
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcC---CCeE
Confidence 445554 4678899999999999999999999876 46677889999999999999 6999999998 9999
Q ss_pred EEEEccCc---------eeeeecccccccEEEEEEcCC--CCEEEEcccCCeEEEEeCCcceeeceEEEeccce-eEecC
Q 036585 85 RLLSLHDN---------KYSRYFKGHHDRVVLLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPA-AAYDD 152 (304)
Q Consensus 85 ~vwd~~~~---------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~ 152 (304)
++||+.++ +.+..+..|...|.+++|+|+ +.++++++.||.|++||+++++....+....... ...
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~-- 161 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSI-- 161 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSC--
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccccc--
Confidence 99999887 557778889999999999999 9999999999999999999888776654322110 000
Q ss_pred CCeEEEecCCCeEEEEecCCCCCceEEEEecC---CcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCC
Q 036585 153 QGLVFGYEKGPLDIFSVGGDISDANVVKFSND---GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 229 (304)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 229 (304)
....+...+.+++|+|+ +..+++++.++.+.+|+...++...... ...|...|++++|+|+
T Consensus 162 ---------------~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~i~~~~~~p~ 225 (351)
T 3f3f_A 162 ---------------PPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAK-LPGHKSLIRSISWAPS 225 (351)
T ss_dssp ---------------CCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEE-CCCCCSCEEEEEECCC
T ss_pred ---------------ccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeee-cCCCCcceeEEEECCC
Confidence 11246778999999997 8999999999999888887776533322 2368899999999999
Q ss_pred C----cEEEEecCCCcEEEEecCCC----------------------------------------------ceeeeeecc
Q 036585 230 G----MFVISGSGDGSVHAWSVRSG----------------------------------------------KEVASWMSF 259 (304)
Q Consensus 230 ~----~~l~~~~~dg~i~v~d~~~~----------------------------------------------~~~~~~~~~ 259 (304)
+ ++|++++.||.|++||++++ +.+..+.+|
T Consensus 226 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 305 (351)
T 3f3f_A 226 IGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDH 305 (351)
T ss_dssp SSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTT
T ss_pred CCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecc
Confidence 8 89999999999999999864 556677889
Q ss_pred CCCCceEEeCCCCcEEEEecCc--eEEeccCCc
Q 036585 260 DTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLS 290 (304)
Q Consensus 260 ~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~ 290 (304)
...|++++|+|++++|++++.| +++|+++..
T Consensus 306 ~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 306 NGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp SSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred cccEEEEEEcCCCCEEEEecCCCcEEEEecCcC
Confidence 9999999999999999999999 999999764
No 37
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=267.24 Aligned_cols=268 Identities=15% Similarity=0.238 Sum_probs=216.6
Q ss_pred eeEeecccCcE-EEEeeC---CCeEEEEecCCcceeeee-cccccceeEEEEccC---CCeEEEEecCCCCCceEEEEcc
Q 036585 19 EILQSMEVGIY-LVTASD---DESIRLYDVTAATCLKTI-NSKKYGVDLVCFTSH---PTTVIYSSKNGWDESLRLLSLH 90 (304)
Q Consensus 19 ~~i~~~~~~~~-l~~~~~---d~~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~~~~~~d~~i~vwd~~ 90 (304)
..+.++|+++. +++++. |+.|++||+.+++..... .+|..+|.+++|+|+ ++.|++++. |+.|++||+.
T Consensus 22 ~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~---dg~i~iwd~~ 98 (357)
T 3i2n_A 22 FDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF---GGNLHIWNLE 98 (357)
T ss_dssp EEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET---TSCEEEECTT
T ss_pred EEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecC---CCeEEEEeCC
Confidence 34678898855 456665 899999999988765443 378899999999998 699999998 9999999999
Q ss_pred Cce-eeeecccccccEEEEEE------cCCCCEEEEcccCCeEEEEeCCcce-eeceEEEecc----c--eeE----ecC
Q 036585 91 DNK-YSRYFKGHHDRVVLLSL------CSSKDCFISGSLDRTVLLWDQRAEK-CQGLLRVQGR----P--AAA----YDD 152 (304)
Q Consensus 91 ~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~----~--~~~----~~~ 152 (304)
+++ .+..+.+|...|.++.| +|++++|++++.|+.|++||++++. ....+..... . .+. +++
T Consensus 99 ~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 178 (357)
T 3i2n_A 99 APEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ 178 (357)
T ss_dssp SCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-
T ss_pred CCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC
Confidence 988 88889999999999955 6789999999999999999999876 4444432211 1 222 445
Q ss_pred CC--eEEEecCCCeEEEEecC--------CCCCceEEEEec---CCcEEEEeeCCCeEEEEEcCCCceeEEEE--eCCCC
Q 036585 153 QG--LVFGYEKGPLDIFSVGG--------DISDANVVKFSN---DGRLMLLTTMEGHIHVLDSFRGTLLSTYN--VKPVS 217 (304)
Q Consensus 153 ~~--~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~---~~~~l~~~~~dg~i~~~d~~~~~~~~~~~--~~~~~ 217 (304)
++ .+.+..++.+.+|++.. +...+.+++|+| ++.++++++.||.|++||+++++....+. ....|
T Consensus 179 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 258 (357)
T 3i2n_A 179 EERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAH 258 (357)
T ss_dssp CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECC
T ss_pred CCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCC
Confidence 55 44466678888888653 678899999999 99999999999999999998876654443 11258
Q ss_pred CCcceEEEEcCCCc-EEEEecCCCcEEEEecCCC-------------------ceeeeeeccCCCCceEEeCCCCcEEE-
Q 036585 218 RNSTLEASFSPEGM-FVISGSGDGSVHAWSVRSG-------------------KEVASWMSFDTEPPVIKWAPGSLMFV- 276 (304)
Q Consensus 218 ~~~i~~~~~s~~~~-~l~~~~~dg~i~v~d~~~~-------------------~~~~~~~~~~~~i~~~~~~~~~~~l~- 276 (304)
...|++++|+|+++ +|++++.||.|++||++++ +++..+.+|..+|++++|+|++++|+
T Consensus 259 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 338 (357)
T 3i2n_A 259 KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCV 338 (357)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEE
T ss_pred cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEE
Confidence 89999999999998 8999999999999999754 35667788999999999999999998
Q ss_pred EecCc--eEEeccCC
Q 036585 277 TGSSE--LSFWIPDL 289 (304)
Q Consensus 277 s~~~d--~~iw~~~~ 289 (304)
+++.| +++|++..
T Consensus 339 s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 339 CSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEETTSEEEEEEECC
T ss_pred EecCCCcEEEEECCC
Confidence 78888 89998753
No 38
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=263.96 Aligned_cols=263 Identities=17% Similarity=0.240 Sum_probs=221.7
Q ss_pred eeeeccee---eEeeccc---CcEEEEeeCCCeEEEEecCC-ccee-eeecccccceeEEEEccCCCeEEEEecCCCCCc
Q 036585 12 VSLELSEE---ILQSMEV---GIYLVTASDDESIRLYDVTA-ATCL-KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 83 (304)
Q Consensus 12 ~~~~~~~~---~i~~~~~---~~~l~~~~~d~~i~vw~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~ 83 (304)
..+..|.. .+.++|+ |++|++++.||.|++||+.+ ++.+ ..+.+|...|.+++|+|++++|++++. |+.
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~ 109 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC---DKT 109 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---TSE
T ss_pred EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC---CCc
Confidence 34445544 4678888 69999999999999999987 5544 778899999999999999999999998 999
Q ss_pred eEEEEccCceeeeecccccccEEEEEE--cCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccc-eeEecCCCeEEEec
Q 036585 84 LRLLSLHDNKYSRYFKGHHDRVVLLSL--CSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP-AAAYDDQGLVFGYE 160 (304)
Q Consensus 84 i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 160 (304)
|++||+.+++.+. +..|...|.+++| +|++++|++++.|+.|++||+++++....+..+... ......+..+.+..
T Consensus 110 v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (368)
T 3mmy_A 110 AKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATA 188 (368)
T ss_dssp EEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEG
T ss_pred EEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeC
Confidence 9999999988766 4569999999999 889999999999999999999998887777654432 34455666777888
Q ss_pred CCCeEEEEecCC-----------CCCceEEEEecCCcE----EEEeeCCCeEEEEEcCCC---ceeEEEEeCCCCCC---
Q 036585 161 KGPLDIFSVGGD-----------ISDANVVKFSNDGRL----MLLTTMEGHIHVLDSFRG---TLLSTYNVKPVSRN--- 219 (304)
Q Consensus 161 ~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~----l~~~~~dg~i~~~d~~~~---~~~~~~~~~~~~~~--- 219 (304)
++.+.+|++... .....++.+.++... +++++.||.|++||++.. +....+. .|..
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~---~~~~~~~ 265 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK---CHRSNGT 265 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE---CSEEC--
T ss_pred CCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee---eeecccc
Confidence 888999887643 244566677666554 999999999999999887 4555665 3433
Q ss_pred ---------cceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc
Q 036585 220 ---------STLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE 281 (304)
Q Consensus 220 ---------~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d 281 (304)
.|++++|+|++++|++++.||.|++||+++++++..+..|..+|++++|+|++++|++++.|
T Consensus 266 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 266 NTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp --CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred cccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecc
Confidence 79999999999999999999999999999999999999999999999999999999999887
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=4.4e-40 Score=271.11 Aligned_cols=247 Identities=17% Similarity=0.226 Sum_probs=213.9
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecc
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFK 99 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~ 99 (304)
.+.++|+|++|++++.|+.|++||+.+++....+..| ..+....|+|++++|++++. |+.|++||+.+++....+.
T Consensus 61 ~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTT---EGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp TCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEET---TSCEEEECTTSCEEEEETT
T ss_pred ceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEEC---CCCEEEEeCCCcceeeecc
Confidence 5788999999999999999999999988887777776 35556688999999999998 9999999999999998888
Q ss_pred cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEE
Q 036585 100 GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVV 179 (304)
Q Consensus 100 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 179 (304)
+|...|.+++|+|++++|++++.|+.|++||+++++....+. +|...|.++
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-----------------------------~h~~~v~~~ 187 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLI-----------------------------GHRATVTDI 187 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEE-----------------------------CCSSCEEEE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEc-----------------------------CCCCcEEEE
Confidence 999999999999999999999999999999999887655443 577899999
Q ss_pred EEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCc---------------------ceEEEEcCCCcEEEEecC
Q 036585 180 KFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNS---------------------TLEASFSPEGMFVISGSG 238 (304)
Q Consensus 180 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~---------------------i~~~~~s~~~~~l~~~~~ 238 (304)
+|+|++++|++++.||.|++||+++++....+.....+... +.+++|+|++++|++++.
T Consensus 188 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 267 (420)
T 3vl1_A 188 AIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV 267 (420)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET
T ss_pred EEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC
Confidence 99999999999999999999999999998888754334444 444556899999999999
Q ss_pred CCcEEEEecCCCceeeee-eccCCCCceEEeCCCCc-EEEEecCc--eEEeccCCcc--ccccccCC
Q 036585 239 DGSVHAWSVRSGKEVASW-MSFDTEPPVIKWAPGSL-MFVTGSSE--LSFWIPDLSK--LGAYVGRN 299 (304)
Q Consensus 239 dg~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~-~l~s~~~d--~~iw~~~~~~--~~~~~~~~ 299 (304)
||.|++||+++++.+..+ ..|...|++++|+|++. +|++++.| +++|++...+ +..+.+|+
T Consensus 268 dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~ 334 (420)
T 3vl1_A 268 SGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINE 334 (420)
T ss_dssp TSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEEST
T ss_pred CCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccC
Confidence 999999999998887766 45888999999999998 99999998 9999997542 45555544
No 40
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.3e-39 Score=259.46 Aligned_cols=249 Identities=13% Similarity=0.225 Sum_probs=210.0
Q ss_pred cceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeE
Q 036585 47 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTV 126 (304)
Q Consensus 47 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 126 (304)
.+...++.+|...|.+++|+|++++|++++. |+.|++||+.+++.+..+..|...|.+++|+|+++++++++.|+.+
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~---Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v 121 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQ---DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNIC 121 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEET---TTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeC---CCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeE
Confidence 4556788999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccee----eceEEEeccc--eeEecCCC-eEEEecCCCeEEEEec---------CCCCCceEEEEecCCcEEEE
Q 036585 127 LLWDQRAEKC----QGLLRVQGRP--AAAYDDQG-LVFGYEKGPLDIFSVG---------GDISDANVVKFSNDGRLMLL 190 (304)
Q Consensus 127 ~iwd~~~~~~----~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~ 190 (304)
++||+.+... ...+..+... .+.+.+++ .+.+..++.+.+|++. +|...|.+++|+|+++++++
T Consensus 122 ~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp EEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEE
Confidence 9999987532 2222222222 33444444 4456677888888753 58889999999999999999
Q ss_pred eeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeec--cCCCCceEEe
Q 036585 191 TTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMS--FDTEPPVIKW 268 (304)
Q Consensus 191 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--~~~~i~~~~~ 268 (304)
++.||.|++||+++++....+. .|...|++++|+|++++|++|+.||.|++||+++++.+..+.. +...|++++|
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~---~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 278 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFT---GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSF 278 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEEC---CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EeCCCcEEEEECCCCeeEEEEc---CCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEE
Confidence 9999999999999999888887 6889999999999999999999999999999999887766642 3347999999
Q ss_pred CCCCcEEEEecCc--eEEeccCC-ccccccccCCCC
Q 036585 269 APGSLMFVTGSSE--LSFWIPDL-SKLGAYVGRNRG 301 (304)
Q Consensus 269 ~~~~~~l~s~~~d--~~iw~~~~-~~~~~~~~~~~g 301 (304)
+|++++|++|+.| +++|+... ..+..+.+|...
T Consensus 279 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~ 314 (340)
T 1got_B 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNR 314 (340)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred CCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCc
Confidence 9999999999999 99999854 445666777654
No 41
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-39 Score=262.98 Aligned_cols=261 Identities=13% Similarity=0.194 Sum_probs=220.2
Q ss_pred eEeeccc----CcEEEEeeCCCeEEEEecCCcceeeeeccc-----ccceeEEEEccC----CCeEEEEecCCCCCceEE
Q 036585 20 ILQSMEV----GIYLVTASDDESIRLYDVTAATCLKTINSK-----KYGVDLVCFTSH----PTTVIYSSKNGWDESLRL 86 (304)
Q Consensus 20 ~i~~~~~----~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~-----~~~v~~~~~~~~----~~~l~~~~~~~~d~~i~v 86 (304)
.+.++|+ ...+++++.++.|++||+.+++.+..+..| ...|.+++|+|+ +.+|++++. |+.|++
T Consensus 23 ~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~---dg~i~v 99 (366)
T 3k26_A 23 GVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS---RGIIRI 99 (366)
T ss_dssp EEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET---TCEEEE
T ss_pred EEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC---CCEEEE
Confidence 4567763 456666667779999999988887777654 467999999999 668999998 999999
Q ss_pred EEccCceeeeecccccccEEEEEEcC-CCCEEEEcccCCeEEEEeCCcceeeceEE---Ee--ccceeEecCCC--eEEE
Q 036585 87 LSLHDNKYSRYFKGHHDRVVLLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLR---VQ--GRPAAAYDDQG--LVFG 158 (304)
Q Consensus 87 wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~--~~~~~~~~~~~--~~~~ 158 (304)
||+.+++.+..+.+|...|.+++|+| ++++|++++.||.|++||+++++....+. .+ ....+.+++++ .+.+
T Consensus 100 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 179 (366)
T 3k26_A 100 INPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSC 179 (366)
T ss_dssp ECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEE
T ss_pred EEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEe
Confidence 99999999999999999999999999 89999999999999999999988776662 22 23356777776 4456
Q ss_pred ecCCCeEEEEecC-------------------------------------CCCCceEEEEecCCcEEEEeeCCCeEEEEE
Q 036585 159 YEKGPLDIFSVGG-------------------------------------DISDANVVKFSNDGRLMLLTTMEGHIHVLD 201 (304)
Q Consensus 159 ~~~~~~~~~~~~~-------------------------------------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d 201 (304)
..++.+.+|++.. |...|.+++|+ ++++++++.||.|++||
T Consensus 180 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd 257 (366)
T 3k26_A 180 GMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWK 257 (366)
T ss_dssp ETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEE
T ss_pred cCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEe
Confidence 6789999998762 78889999998 77999999999999999
Q ss_pred cCCCce--------------eEEEEeCCCCCCcceEEEEcCC--CcEEEEecCCCcEEEEecCCCcee----eeeecc--
Q 036585 202 SFRGTL--------------LSTYNVKPVSRNSTLEASFSPE--GMFVISGSGDGSVHAWSVRSGKEV----ASWMSF-- 259 (304)
Q Consensus 202 ~~~~~~--------------~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~i~v~d~~~~~~~----~~~~~~-- 259 (304)
+++++. +..+. .+...+++++|+|+ +++|++++.||.|++||+.++++. ..+..|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 334 (366)
T 3k26_A 258 PGKMEDDIDKIKPSESNVTILGRFD---YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKC 334 (366)
T ss_dssp ESSTTCCGGGCCTTCCCEEEEEEEE---CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTC
T ss_pred CCCccccccccccCCcchheecccc---ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEccccc
Confidence 987654 55555 68889999999999 999999999999999999987643 366777
Q ss_pred CCCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 260 DTEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 260 ~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
...|++++|+|++++|++++.| +++|++.
T Consensus 335 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 335 GAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 7899999999999999999999 8899864
No 42
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1e-38 Score=262.86 Aligned_cols=259 Identities=16% Similarity=0.220 Sum_probs=215.0
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeec--ccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
..+.|++. ++||+|. |++|+|||..+++....+. +|...|.+++|+|++++|++|+. |+.|++||+++++.+.
T Consensus 109 ~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~---Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 109 NLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRLR 183 (420)
T ss_dssp BCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEE
T ss_pred eeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC---CCeEEEEEcCCCcEEE
Confidence 34666654 5777765 8999999999998877665 56778999999999999999998 9999999999999999
Q ss_pred ecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceee-ceEEEecc--ceeEecCCCe--EEEecCCCeEEEEec-
Q 036585 97 YFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ-GLLRVQGR--PAAAYDDQGL--VFGYEKGPLDIFSVG- 170 (304)
Q Consensus 97 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~- 170 (304)
.+.+|...+.++.++ +..+++++.|+.+++||.+..... ..+..+.. ....+.+++. +.+..++.+.+|+..
T Consensus 184 ~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~ 261 (420)
T 4gga_A 184 NMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 261 (420)
T ss_dssp EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeecc
Confidence 999999999998875 679999999999999998865433 33332222 2455666653 446667888888753
Q ss_pred ------------CCCCCceEEEEecCCc-EEEE--eeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEE
Q 036585 171 ------------GDISDANVVKFSNDGR-LMLL--TTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 235 (304)
Q Consensus 171 ------------~~~~~v~~~~~~~~~~-~l~~--~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 235 (304)
.|...|.+++|+|++. .+++ |+.|++|++||+.+++....+. ....+.++.|+|+++.+++
T Consensus 262 ~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~----~~~~v~~~~~~~~~~~lv~ 337 (420)
T 4gga_A 262 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD----AHSQVCSILWSPHYKELIS 337 (420)
T ss_dssp CSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE----CSSCEEEEEEETTTTEEEE
T ss_pred ccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec----cccceeeeeecCCCCeEEE
Confidence 3667899999999765 4444 4579999999999999998887 5567899999999998887
Q ss_pred ec--CCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 236 GS--GDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 236 ~~--~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
++ .|+.|+|||+.+++++..+.+|.++|++++|+|+|++|+||+.| ++||++.
T Consensus 338 ~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 338 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 54 79999999999999999999999999999999999999999999 9999874
No 43
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.6e-39 Score=268.42 Aligned_cols=273 Identities=19% Similarity=0.290 Sum_probs=228.4
Q ss_pred ceeeeecceee-E-eecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEE
Q 036585 10 DKVSLELSEEI-L-QSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 87 (304)
Q Consensus 10 ~~~~~~~~~~~-i-~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vw 87 (304)
....+.+|... + .+..++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++ .+++++. |+.|++|
T Consensus 113 ~~~~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~---dg~i~vw 188 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGST---DRTVRVW 188 (464)
T ss_dssp EEEEEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEET---TSCEEEE
T ss_pred ceEEEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeC---CCCEEEE
Confidence 34466677654 2 344578999999999999999999999999999999999999999988 8899988 9999999
Q ss_pred EccCceeeeecccccccEEEEEEc--CCCCEEEEcccCCeEEEEeCCcceeece-----------------------EEE
Q 036585 88 SLHDNKYSRYFKGHHDRVVLLSLC--SSKDCFISGSLDRTVLLWDQRAEKCQGL-----------------------LRV 142 (304)
Q Consensus 88 d~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~-----------------------~~~ 142 (304)
|+.+++.+..+.+|...|.+++|+ ++++++++++.|+.|++||+++...... +..
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG 268 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC
Confidence 999999999999999999999998 5778999999999999999987654322 111
Q ss_pred ecccee--EecCCCeEEEecCCCeEEEEe---------cCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEE
Q 036585 143 QGRPAA--AYDDQGLVFGYEKGPLDIFSV---------GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTY 211 (304)
Q Consensus 143 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 211 (304)
+..... ..+.+..+.+..++.+.+|++ .+|...|.+++|+|+++++++++.||.|++||+++++.+..+
T Consensus 269 ~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 348 (464)
T 3v7d_B 269 HMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTL 348 (464)
T ss_dssp CSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 112222 223344556777788888865 357889999999999999999999999999999999999888
Q ss_pred EeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc-eEEeccCCc
Q 036585 212 NVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE-LSFWIPDLS 290 (304)
Q Consensus 212 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-~~iw~~~~~ 290 (304)
. .|...+.+++|+ +++|++++.||.|++||+.+++...... +...+..++|+|+++++++++.+ +++|+++..
T Consensus 349 ~---~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g 422 (464)
T 3v7d_B 349 Q---GHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGSENQFNIYNLRSG 422 (464)
T ss_dssp C---CCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEETTEEEEEETTTC
T ss_pred e---CCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEecCCeEEEEECCCC
Confidence 7 688999999997 5799999999999999999887665553 67788899999999999999966 999999765
Q ss_pred cc
Q 036585 291 KL 292 (304)
Q Consensus 291 ~~ 292 (304)
++
T Consensus 423 ~~ 424 (464)
T 3v7d_B 423 KL 424 (464)
T ss_dssp CE
T ss_pred cE
Confidence 54
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.9e-40 Score=264.69 Aligned_cols=241 Identities=12% Similarity=0.087 Sum_probs=211.4
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCcc--eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceee
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYS 95 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~ 95 (304)
...+.+++++++|++++.|+.|++||+.+++ .+..+.+|...|.+++|+|++++|++++. |+.|++||+.+++..
T Consensus 11 i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~ 87 (372)
T 1k8k_C 11 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT---DRNAYVWTLKGRTWK 87 (372)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET---TSCEEEEEEETTEEE
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC---CCeEEEEECCCCeee
Confidence 3457889999999999999999999999887 88899999999999999999999999998 999999999988644
Q ss_pred e--ecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCC
Q 036585 96 R--YFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDI 173 (304)
Q Consensus 96 ~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (304)
. .+..|...|.+++|+|++++|++++.|+.|++||++........... ...|.
T Consensus 88 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-------------------------~~~~~ 142 (372)
T 1k8k_C 88 PTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI-------------------------KKPIR 142 (372)
T ss_dssp EEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE-------------------------CTTCC
T ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee-------------------------ecccC
Confidence 3 34678999999999999999999999999999999876532222111 12467
Q ss_pred CCceEEEEecCCcEEEEeeCCCeEEEEEcC------------------CCceeEEEEeCCCCCCcceEEEEcCCCcEEEE
Q 036585 174 SDANVVKFSNDGRLMLLTTMEGHIHVLDSF------------------RGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 235 (304)
Q Consensus 174 ~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~------------------~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 235 (304)
..|.+++|+|++++|++++.||.|++||++ .++....+. .|...+.+++|+|++++|++
T Consensus 143 ~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~ 219 (372)
T 1k8k_C 143 STVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS---SSCGWVHGVCFSANGSRVAW 219 (372)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC---CCSSCEEEEEECSSSSEEEE
T ss_pred CCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC---CCCCeEEEEEECCCCCEEEE
Confidence 889999999999999999999999999954 566666665 68889999999999999999
Q ss_pred ecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc-eEEeccCC
Q 036585 236 GSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE-LSFWIPDL 289 (304)
Q Consensus 236 ~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-~~iw~~~~ 289 (304)
++.|+.|++||+++++++..+..|..+|.+++|+|++.+++++... +++|+++.
T Consensus 220 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 220 VSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred EeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 9999999999999999999999999999999999999999998555 99999866
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.2e-39 Score=261.21 Aligned_cols=270 Identities=13% Similarity=0.128 Sum_probs=217.4
Q ss_pred eeecce---eeEeecccC-cEEEEeeCCCeEEEEecCCcceeeeec--ccccceeEEEEcc-CCCeEEEEecCCCCCceE
Q 036585 13 SLELSE---EILQSMEVG-IYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTS-HPTTVIYSSKNGWDESLR 85 (304)
Q Consensus 13 ~~~~~~---~~i~~~~~~-~~l~~~~~d~~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~~~~d~~i~ 85 (304)
.+..|. ..+.+++++ ++|++++.||.|++||+.+++....+. +|...|.+++|+| +++.|++++. |+.|+
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---d~~i~ 144 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSI---RGATT 144 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEET---TTEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeC---CCEEE
Confidence 444444 346788998 999999999999999999888777665 6999999999999 7789999998 99999
Q ss_pred EEEccCceeeeeccc---ccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEecc--ceeEecCCCe---EE
Q 036585 86 LLSLHDNKYSRYFKG---HHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDDQGL---VF 157 (304)
Q Consensus 86 vwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~---~~ 157 (304)
+||+.+ +.+..+.. |...|.+++|+|++++|++++.|+.|++||++ ++....+..+.. ..+.+++++. +.
T Consensus 145 iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 145 LRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEE
T ss_pred EEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEE
Confidence 999986 44444443 44789999999999999999999999999994 555555544333 3567788763 44
Q ss_pred EecCCCeEEEEecC------------CCCCceEEEEec-CCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCC----CC--
Q 036585 158 GYEKGPLDIFSVGG------------DISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV----SR-- 218 (304)
Q Consensus 158 ~~~~~~~~~~~~~~------------~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~----~~-- 218 (304)
+..++.+++|++.. |...|.+++|+| ++++|++++.|+.|++||+++++....+..+.. +.
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 302 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTP 302 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCC
T ss_pred EeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccc
Confidence 66778899998763 668899999999 999999999999999999999887777663211 11
Q ss_pred --------CcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeec--cCCCCceEEeCCCCcEEEEecCc-eEEecc
Q 036585 219 --------NSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMS--FDTEPPVIKWAPGSLMFVTGSSE-LSFWIP 287 (304)
Q Consensus 219 --------~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~s~~~d-~~iw~~ 287 (304)
..+..++|+|++++ +++.|+.|++||+.+++++..+.+ |...+..++|+|++++|+++++. ++||++
T Consensus 303 ~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd~~i~iw~~ 380 (383)
T 3ei3_B 303 IKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGMGFNILIWNR 380 (383)
T ss_dssp CCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEETTEEEEEEC
T ss_pred eEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEecCCcEEEEec
Confidence 33445677777766 778999999999999999999876 56778888999999999999844 999998
Q ss_pred CC
Q 036585 288 DL 289 (304)
Q Consensus 288 ~~ 289 (304)
+.
T Consensus 381 ~~ 382 (383)
T 3ei3_B 381 ED 382 (383)
T ss_dssp C-
T ss_pred CC
Confidence 64
No 46
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-39 Score=265.44 Aligned_cols=262 Identities=16% Similarity=0.181 Sum_probs=229.8
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
...+.+++++++|++++.||.|++|| .+++.+..+..|...|.+++|+|+++.|++++. |+.|++||+.+++.+..
T Consensus 111 v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~ 186 (425)
T 1r5m_A 111 VTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDV---ENVTILWNVISGTVMQH 186 (425)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEET---TCCEEEEETTTTEEEEE
T ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEec---CCeEEEEECCCCcEEEE
Confidence 44578899999999999999999999 678888999999999999999999999999998 99999999999999888
Q ss_pred ccccccc---------------EEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEecc--ceeEecCCC--eEEE
Q 036585 98 FKGHHDR---------------VVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDDQG--LVFG 158 (304)
Q Consensus 98 ~~~~~~~---------------v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~ 158 (304)
+..+... +.++.|+|++ .+++++.++.|++||+++++....+..+.. ..+.+++++ .+.+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 187 FELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp ECCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred eeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE
Confidence 8877776 9999999975 688899999999999998877666654333 346677776 4556
Q ss_pred ecCCCeEEEEec---------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCC
Q 036585 159 YEKGPLDIFSVG---------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 229 (304)
Q Consensus 159 ~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 229 (304)
..++.+.+|++. .|...+.+++|+|++ .+++++.||.|++||+++++.+..+. .+...+.+++|+|+
T Consensus 266 ~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~i~~~~~s~~ 341 (425)
T 1r5m_A 266 SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSI---VDGVPIFAGRISQD 341 (425)
T ss_dssp ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEE---CTTCCEEEEEECTT
T ss_pred cCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecc---cCCccEEEEEEcCC
Confidence 678889998764 477889999999999 99999999999999999999988888 67889999999999
Q ss_pred CcEEEEecCCCcEEEEecCCCc--------------------eeeeeeccCC--CCceEEeCCCCcEEEEecCc--eEEe
Q 036585 230 GMFVISGSGDGSVHAWSVRSGK--------------------EVASWMSFDT--EPPVIKWAPGSLMFVTGSSE--LSFW 285 (304)
Q Consensus 230 ~~~l~~~~~dg~i~v~d~~~~~--------------------~~~~~~~~~~--~i~~~~~~~~~~~l~s~~~d--~~iw 285 (304)
+++|++++.||.|++||+++++ ++..+..|.. .|++++|+|++++|++++.| +++|
T Consensus 342 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 421 (425)
T 1r5m_A 342 GQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVV 421 (425)
T ss_dssp SSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEE
T ss_pred CCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEE
Confidence 9999999999999999999887 7888888876 99999999999999999998 9999
Q ss_pred ccC
Q 036585 286 IPD 288 (304)
Q Consensus 286 ~~~ 288 (304)
+++
T Consensus 422 ~~~ 424 (425)
T 1r5m_A 422 AIP 424 (425)
T ss_dssp ECC
T ss_pred eec
Confidence 875
No 47
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=269.22 Aligned_cols=251 Identities=13% Similarity=0.245 Sum_probs=204.7
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcc-----------eeeeecccc------------cceeEEEEccCC--Ce
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAAT-----------CLKTINSKK------------YGVDLVCFTSHP--TT 71 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~--~~ 71 (304)
....+.++++|++||+|+.||.|+|||+.+++ ....+.+|. ..|.+++|+|++ ..
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~ 109 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQ 109 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcce
Confidence 34568899999999999999999999999876 577888998 889999999998 78
Q ss_pred EEEEecCCCCCceEEEEccCceee---------------------------------------ee-cccccccEEEEEEc
Q 036585 72 VIYSSKNGWDESLRLLSLHDNKYS---------------------------------------RY-FKGHHDRVVLLSLC 111 (304)
Q Consensus 72 l~~~~~~~~d~~i~vwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~ 111 (304)
|++++. |+.|++||+.+++.. .. ..+|...|.+++|+
T Consensus 110 l~s~s~---d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 110 FLLSTN---DKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp EEEEEC---SSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred EEEeCC---CCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 999988 999999999875432 12 35799999999999
Q ss_pred CCCCEEEEcccCCeEEEEeCCcce-eeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCC-cEEE
Q 036585 112 SSKDCFISGSLDRTVLLWDQRAEK-CQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDG-RLML 189 (304)
Q Consensus 112 ~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~ 189 (304)
|++++|+++ .|+.|++||+++.. ....+..... .+.+|...|.+++|+|++ ++|+
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~----------------------~~~~~~~~v~~~~~~p~~~~~l~ 243 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPA----------------------NMEELTEVITAAEFHPNSCNTFV 243 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCS----------------------SGGGCCCCEEEEEECSSCTTEEE
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccc----------------------cccccCcceEEEEECCCCCcEEE
Confidence 999999998 79999999998433 3222211100 123678899999999998 9999
Q ss_pred EeeCCCeEEEEEcCCCce----eEEEEeCCCCCC------------cceEEEEcCCCcEEEEecCCCcEEEEecCC-Cce
Q 036585 190 LTTMEGHIHVLDSFRGTL----LSTYNVKPVSRN------------STLEASFSPEGMFVISGSGDGSVHAWSVRS-GKE 252 (304)
Q Consensus 190 ~~~~dg~i~~~d~~~~~~----~~~~~~~~~~~~------------~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~-~~~ 252 (304)
+++.||.|++||+++++. ...+. .+.. .|.+++|+|++++|++++. +.|++||+++ +++
T Consensus 244 s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~ 319 (447)
T 3dw8_B 244 YSSSKGTIRLCDMRASALCDRHSKLFE---EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP 319 (447)
T ss_dssp EEETTSCEEEEETTTCSSSCTTCEEEC---CC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC
T ss_pred EEeCCCeEEEEECcCCccccceeeEec---cCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc
Confidence 999999999999999886 56665 3444 8999999999999999998 9999999997 888
Q ss_pred eeeeeccCCCC---------------ceEEeCCCCcEEEEecCc--eEEeccCCcccccccc
Q 036585 253 VASWMSFDTEP---------------PVIKWAPGSLMFVTGSSE--LSFWIPDLSKLGAYVG 297 (304)
Q Consensus 253 ~~~~~~~~~~i---------------~~~~~~~~~~~l~s~~~d--~~iw~~~~~~~~~~~~ 297 (304)
+..+.+|...+ ..++|+|++++|++++.| +++|++...+...+.+
T Consensus 320 ~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 381 (447)
T 3dw8_B 320 VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEA 381 (447)
T ss_dssp SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEEC
T ss_pred cceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeee
Confidence 88888886422 249999999999999999 9999998766544433
No 48
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-40 Score=269.23 Aligned_cols=268 Identities=16% Similarity=0.197 Sum_probs=224.6
Q ss_pred eeeEeecccCc-EEEEe----------eCCCeEEEEecCCcc---eeeeecccccceeEEEEccCCCeEEEEecCCCCCc
Q 036585 18 EEILQSMEVGI-YLVTA----------SDDESIRLYDVTAAT---CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES 83 (304)
Q Consensus 18 ~~~i~~~~~~~-~l~~~----------~~d~~i~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~ 83 (304)
...+.++|+|+ +|+++ +.|+.|++||+.+++ .+..+ .|...|.+++|+|++++|++++. |+.
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~---dg~ 90 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVDSKFNDLDWSHNNKIIAGALD---NGS 90 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCSSCEEEEEECSSSSCEEEEES---SSC
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecCCceEEEEECCCCCeEEEEcc---CCe
Confidence 34578999987 99999 899999999999876 33333 57889999999999999999998 999
Q ss_pred eEEEEccC----ceeeeecccccccEEEEEEcCC-CCEEEEcccCCeEEEEeCCcce------eeceE---EE--eccce
Q 036585 84 LRLLSLHD----NKYSRYFKGHHDRVVLLSLCSS-KDCFISGSLDRTVLLWDQRAEK------CQGLL---RV--QGRPA 147 (304)
Q Consensus 84 i~vwd~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~------~~~~~---~~--~~~~~ 147 (304)
|++||+.+ .+.+..+.+|...|.+++|+|+ +++|++++.|+.|++||+++.+ ....+ .. .....
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVIS 170 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCE
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeE
Confidence 99999987 4578888899999999999998 8999999999999999999876 22222 11 22345
Q ss_pred eEecCC-C--eEEEecCCCeEEEEecC---------C------CCCceEEEEecCC-cEEEEeeCCC---eEEEEEcCCC
Q 036585 148 AAYDDQ-G--LVFGYEKGPLDIFSVGG---------D------ISDANVVKFSNDG-RLMLLTTMEG---HIHVLDSFRG 205 (304)
Q Consensus 148 ~~~~~~-~--~~~~~~~~~~~~~~~~~---------~------~~~v~~~~~~~~~-~~l~~~~~dg---~i~~~d~~~~ 205 (304)
+.++++ + .+.+..++.+.+|++.. + ...+.+++|+|++ .++++++.++ .|++||++++
T Consensus 171 ~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 171 LAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred EEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 777776 3 34456788899998653 2 6789999999997 6899999998 9999999986
Q ss_pred -ceeEEEEeCCCCCCcceEEEEcC-CCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCC-cEEEEecCc-
Q 036585 206 -TLLSTYNVKPVSRNSTLEASFSP-EGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGS-LMFVTGSSE- 281 (304)
Q Consensus 206 -~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~s~~~d- 281 (304)
+....+. ..|...+.+++|+| ++++|++++.|+.|++||+++++++..+..|...|++++|+|++ .+|++++.|
T Consensus 251 ~~~~~~~~--~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 251 NTPLQTLN--QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp TSCSBCCC--SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSS
T ss_pred CCCcEEee--cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCC
Confidence 4444332 14788999999999 99999999999999999999999999999999999999999999 899999998
Q ss_pred -eEEeccCCcc
Q 036585 282 -LSFWIPDLSK 291 (304)
Q Consensus 282 -~~iw~~~~~~ 291 (304)
+++|+++...
T Consensus 329 ~i~iw~~~~~~ 339 (416)
T 2pm9_A 329 KIEVQTLQNLT 339 (416)
T ss_dssp EEEEEESCCCC
T ss_pred cEEEEEccCCC
Confidence 9999986544
No 49
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.3e-38 Score=281.24 Aligned_cols=273 Identities=17% Similarity=0.217 Sum_probs=239.1
Q ss_pred eeeeecce---eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEE
Q 036585 11 KVSLELSE---EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 87 (304)
Q Consensus 11 ~~~~~~~~---~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vw 87 (304)
...+++|. ..+.++|+|++|++++.||.|++||+.+++.+..+.+|..+|.+++|+|+++.|++++. |+.|++|
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---dg~i~vw 82 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD---DFRIRVF 82 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET---TSEEEEE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC---CCeEEEE
Confidence 34455554 45788999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred EccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcc-eeeceEEEecc--ceeEecC-CC--eEEEecC
Q 036585 88 SLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAE-KCQGLLRVQGR--PAAAYDD-QG--LVFGYEK 161 (304)
Q Consensus 88 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~--~~~~~~~-~~--~~~~~~~ 161 (304)
|+.+++.+..+.+|.+.|.+++|+|++++|++++.||.|++||++++ .....+..+.. ..+.++| ++ .+.+..+
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~d 162 (814)
T 3mkq_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD 162 (814)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETT
T ss_pred ECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCC
Confidence 99999999999999999999999999999999999999999999887 44444443333 3567777 44 4557778
Q ss_pred CCeEEEEecC----------CCCCceEEEEec--CCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCC
Q 036585 162 GPLDIFSVGG----------DISDANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 229 (304)
Q Consensus 162 ~~~~~~~~~~----------~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 229 (304)
+.+.+|++.. +...+..++|+| ++.++++++.||.|++||+++++....+. .|...+.+++|+|+
T Consensus 163 g~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---~~~~~v~~~~~~~~ 239 (814)
T 3mkq_A 163 RTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLE---GHMSNVSFAVFHPT 239 (814)
T ss_dssp SEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEE---CCSSCEEEEEECSS
T ss_pred CeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEc---CCCCCEEEEEEcCC
Confidence 8899998743 337899999999 99999999999999999999999988887 68899999999999
Q ss_pred CcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCc--EEEEecCc-eEEeccCC
Q 036585 230 GMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSL--MFVTGSSE-LSFWIPDL 289 (304)
Q Consensus 230 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~l~s~~~d-~~iw~~~~ 289 (304)
+++|++++.||.|++||+.+++.+..+..|...+.+++|+|++. ++++++.+ +.+|+...
T Consensus 240 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 99999999999999999999999999999999999999999987 57777766 88887643
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.8e-40 Score=276.86 Aligned_cols=235 Identities=14% Similarity=0.094 Sum_probs=187.9
Q ss_pred cCcEEEEeeCCCeEEEEecCCccee----eeecccccceeEEEEccC------CCeEEEEecCCCCCceEEEEccCcee-
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCL----KTINSKKYGVDLVCFTSH------PTTVIYSSKNGWDESLRLLSLHDNKY- 94 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~----~~~~~~~~~v~~~~~~~~------~~~l~~~~~~~~d~~i~vwd~~~~~~- 94 (304)
+++.+++++.|++|+|||+.+++.. ..+..|.+.|..++|+|+ +.+|++++. |++|++||+.+++.
T Consensus 172 ~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~---DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 172 HLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQ---EGTINFLEIIDNATD 248 (524)
T ss_dssp ----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEET---TSCEEEEECCCCSSS
T ss_pred hhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEec---CCeEEEEEcCCCccc
Confidence 3445555778899999999877643 346677889999999997 578999998 99999999986642
Q ss_pred ----------eeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCe
Q 036585 95 ----------SRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPL 164 (304)
Q Consensus 95 ----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (304)
...+.+|...|++++|+|++ .|++|+.||+|++||++++.....
T Consensus 249 ~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~------------------------- 302 (524)
T 2j04_B 249 VHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSF------------------------- 302 (524)
T ss_dssp SSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSE-------------------------
T ss_pred cccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceE-------------------------
Confidence 23567899999999999864 899999999999999987532211
Q ss_pred EEEEecCCCCCceEE--EEecCC-cEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCc
Q 036585 165 DIFSVGGDISDANVV--KFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS 241 (304)
Q Consensus 165 ~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 241 (304)
.+.+|...|.++ .|+|++ .+|++++.|++|++||+++++....+..+. ....+.+++|+|+++.+++++.|++
T Consensus 303 ---~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~-~~~~v~~v~fsp~~~~l~s~~~d~t 378 (524)
T 2j04_B 303 ---YDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF-RGSNLVPVVYCPQIYSYIYSDGASS 378 (524)
T ss_dssp ---EEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC-SCCSCCCEEEETTTTEEEEECSSSE
T ss_pred ---EeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc-ccCcccceEeCCCcCeEEEeCCCCc
Confidence 112678899999 578888 899999999999999999988777665221 1235788999999999999999999
Q ss_pred EEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcccc
Q 036585 242 VHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSKLG 293 (304)
Q Consensus 242 i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~~~ 293 (304)
|++||++++.++..+.+|.+.|++++|+|++++|++|+.| +++|+...+.+.
T Consensus 379 v~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~ 432 (524)
T 2j04_B 379 LRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLH 432 (524)
T ss_dssp EEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTT
T ss_pred EEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhcc
Confidence 9999999999888899999999999999999999999999 999988655433
No 51
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-38 Score=260.87 Aligned_cols=235 Identities=20% Similarity=0.270 Sum_probs=206.3
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEcc-Cceeeee
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH-DNKYSRY 97 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~-~~~~~~~ 97 (304)
..+.+++++++|++++.||.|++||+.+++.+..+.+|...|.+++| ++..+++++. |+.|++||+. ....+..
T Consensus 138 ~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~---dg~i~i~d~~~~~~~~~~ 212 (401)
T 4aez_A 138 ASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSR---SGAIHHHDVRIANHQIGT 212 (401)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEET---TSEEEEEETTSSSCEEEE
T ss_pred EEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcC---CCCEEEEecccCcceeeE
Confidence 45788999999999999999999999999999999999999999999 5679999998 9999999998 5667788
Q ss_pred cccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCce
Q 036585 98 FKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDAN 177 (304)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 177 (304)
+.+|...|.+++|+|++++|++++.|+.|++||+++++....+ ..|...|.
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~-----------------------------~~~~~~v~ 263 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK-----------------------------TNHNAAVK 263 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE-----------------------------CCCSSCCC
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe-----------------------------cCCcceEE
Confidence 8899999999999999999999999999999999986654433 35778899
Q ss_pred EEEEecCCc-EEEEee--CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEE--ecCCCcEEEEecCCCce
Q 036585 178 VVKFSNDGR-LMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS--GSGDGSVHAWSVRSGKE 252 (304)
Q Consensus 178 ~~~~~~~~~-~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~--~~~dg~i~v~d~~~~~~ 252 (304)
+++|+|++. ++++++ .|+.|++||+++++....+. +...+.+++|+|+++++++ |+.||.|++||+.+++.
T Consensus 264 ~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~ 339 (401)
T 4aez_A 264 AVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD----AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGL 339 (401)
T ss_dssp EEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE----CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEE
T ss_pred EEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe----CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccc
Confidence 999999775 455544 79999999999999988887 5678999999999999999 55899999999998655
Q ss_pred e--eeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc
Q 036585 253 V--ASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 253 ~--~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
. ..+.+|...|.+++|+|++++|++++.| +++|++...+
T Consensus 340 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 340 TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 4 4467899999999999999999999998 9999986544
No 52
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.9e-39 Score=259.06 Aligned_cols=257 Identities=13% Similarity=0.157 Sum_probs=221.6
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcc---eeeeecccccceeEEEEccCCC-eEEEEecCCCCCceEEEEc-cCce
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAAT---CLKTINSKKYGVDLVCFTSHPT-TVIYSSKNGWDESLRLLSL-HDNK 93 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~d~~i~vwd~-~~~~ 93 (304)
..+.++|++++|++++.|+.|++|++.+++ ....+..|...|.+++|+|+++ .|++++. |+.|++||+ .+++
T Consensus 15 ~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~~wd~~~~~~ 91 (342)
T 1yfq_A 15 SDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTV---QGEILKVDLIGSPS 91 (342)
T ss_dssp EEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEET---TSCEEEECSSSSSS
T ss_pred EEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcC---CCeEEEEEeccCCc
Confidence 457788999999999999999999998877 3455668999999999999999 9999998 999999999 7775
Q ss_pred eeeeccc--ccccEEEEEEcCCCCEEEEcccCCeEEEEeCCc---------ceeeceEEEe-ccceeEecCCCeEEEecC
Q 036585 94 YSRYFKG--HHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRA---------EKCQGLLRVQ-GRPAAAYDDQGLVFGYEK 161 (304)
Q Consensus 94 ~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 161 (304)
. ..+.+ |...|.+++|+| ++++++++.|+.|++||+++ .+....+... ....+.+++++.+.+..+
T Consensus 92 ~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 169 (342)
T 1yfq_A 92 F-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNN 169 (342)
T ss_dssp E-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEEST
T ss_pred e-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCC
Confidence 4 66778 999999999999 99999999999999999987 6655554422 223567888888888888
Q ss_pred CCeEEEEecC------------CCCCceEEEEec-CCcEEEEeeCCCeEEEEEcCCC------ceeEEEEeCCC------
Q 036585 162 GPLDIFSVGG------------DISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRG------TLLSTYNVKPV------ 216 (304)
Q Consensus 162 ~~~~~~~~~~------------~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~------~~~~~~~~~~~------ 216 (304)
+.+.+|++.. +...+.+++|+| +++++++++.||.|++|+++.. +....+..+..
T Consensus 170 ~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (342)
T 1yfq_A 170 SQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTN 249 (342)
T ss_dssp TEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCS
T ss_pred CeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccc
Confidence 8999998765 345789999999 9999999999999999999887 77777773211
Q ss_pred CCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeecc-CCCCceEEeCCCCcEEEEecCce
Q 036585 217 SRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSF-DTEPPVIKWAPGSLMFVTGSSEL 282 (304)
Q Consensus 217 ~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~s~~~d~ 282 (304)
+...|.+++|+|++++|++++.||.|++||+.+++++..+.+| ..+|++++ |++++|++++.|.
T Consensus 250 ~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg 314 (342)
T 1yfq_A 250 LAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDD 314 (342)
T ss_dssp SCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECT
T ss_pred cceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCC
Confidence 2349999999999999999999999999999999999999998 99999999 9999999999993
No 53
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.7e-39 Score=259.71 Aligned_cols=276 Identities=9% Similarity=0.075 Sum_probs=209.8
Q ss_pred eeeecceeeEeecccCcEEEEeeCCC-------eEEEEecCCcce----------eeeecccccceeEEEEccCCCeEEE
Q 036585 12 VSLELSEEILQSMEVGIYLVTASDDE-------SIRLYDVTAATC----------LKTINSKKYGVDLVCFTSHPTTVIY 74 (304)
Q Consensus 12 ~~~~~~~~~i~~~~~~~~l~~~~~d~-------~i~vw~~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~l~~ 74 (304)
..+.+.--.+.|+|+|++|++|+.+. .|++|++..... ...+..|...+.++++ +++.+++
T Consensus 11 ~~~g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~--~~~~~~~ 88 (365)
T 4h5i_A 11 YNVGYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA--SKGIILV 88 (365)
T ss_dssp EECSSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE--ETTEEEE
T ss_pred cCCCCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe--CCCEEEE
Confidence 33445566799999999999997543 599999875432 1245677777877766 5667777
Q ss_pred EecC--------CCCCceEEEEccCceee----ee-----cccccccEEEEEEcCCCCEEE--EcccCCeEEEEeCCcce
Q 036585 75 SSKN--------GWDESLRLLSLHDNKYS----RY-----FKGHHDRVVLLSLCSSKDCFI--SGSLDRTVLLWDQRAEK 135 (304)
Q Consensus 75 ~~~~--------~~d~~i~vwd~~~~~~~----~~-----~~~~~~~v~~~~~~~~~~~l~--~~~~dg~i~iwd~~~~~ 135 (304)
+... +.|+.+++|++.+.... .. ...+...+.+++|+|||++++ +++.|++|++||+++++
T Consensus 89 g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~ 168 (365)
T 4h5i_A 89 GCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLT 168 (365)
T ss_dssp ECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTE
T ss_pred EECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCc
Confidence 6532 23788999998764321 11 123445689999999999876 45579999999999998
Q ss_pred eeceEEEec-cceeEecCCCeEEE-ecCCCeEEEEe-----------cCCCCCceEEEEecCCcEEEEeeCCC----eEE
Q 036585 136 CQGLLRVQG-RPAAAYDDQGLVFG-YEKGPLDIFSV-----------GGDISDANVVKFSNDGRLMLLTTMEG----HIH 198 (304)
Q Consensus 136 ~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~ 198 (304)
....+.... ...++++|++.++. ..++.+.+|.. ..|...+.+++|+|+++++++++.++ .++
T Consensus 169 ~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~ 248 (365)
T 4h5i_A 169 EKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLT 248 (365)
T ss_dssp EEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEE
T ss_pred EEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEe
Confidence 887776433 34678899886553 33444555432 24667799999999999999998887 688
Q ss_pred EEEcCCCceeEE-EEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeee-eccCCCCceEEeCCCCcEEE
Q 036585 199 VLDSFRGTLLST-YNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASW-MSFDTEPPVIKWAPGSLMFV 276 (304)
Q Consensus 199 ~~d~~~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~ 276 (304)
+|++........ ......+...|++++|+|||++||+|+.|+.|+|||+++++++..+ .+|..+|++++|+|||++|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~la 328 (365)
T 4h5i_A 249 KISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVA 328 (365)
T ss_dssp EEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEE
T ss_pred ecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEE
Confidence 899877654321 1111267889999999999999999999999999999999998875 78999999999999999999
Q ss_pred EecCc--eEEeccCC
Q 036585 277 TGSSE--LSFWIPDL 289 (304)
Q Consensus 277 s~~~d--~~iw~~~~ 289 (304)
++|.| ++||++..
T Consensus 329 S~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 329 SVSAANTIHIIKLPL 343 (365)
T ss_dssp EEETTSEEEEEECCT
T ss_pred EEeCCCeEEEEEcCC
Confidence 99999 99999853
No 54
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.5e-38 Score=293.84 Aligned_cols=284 Identities=14% Similarity=0.242 Sum_probs=233.8
Q ss_pred eeeeecceee---EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEE
Q 036585 11 KVSLELSEEI---LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 87 (304)
Q Consensus 11 ~~~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vw 87 (304)
...+.+|... +.++++|++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|+++++++++. |+.|++|
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---d~~v~vw 684 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA---DKKVKIW 684 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEE
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC---CCeEEEE
Confidence 3445556554 578999999999999999999999999999999999999999999999999999998 9999999
Q ss_pred EccCceeeeecccccccEEEEEEcC--CCCEEEEcccCCeEEEEeCCcceeeceEEEeccc--eeEecCCC--eEEEecC
Q 036585 88 SLHDNKYSRYFKGHHDRVVLLSLCS--SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQG--LVFGYEK 161 (304)
Q Consensus 88 d~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~ 161 (304)
|+.+++.+..+.+|...|.+++|+| ++.++++++.|+.|++||+++++....+..+... .+.+++++ .+.+..+
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC
Confidence 9999999999999999999999999 5568999999999999999998877665543332 45566665 3345556
Q ss_pred CCeEEEEec----------------------------------------------------------------CCCCCce
Q 036585 162 GPLDIFSVG----------------------------------------------------------------GDISDAN 177 (304)
Q Consensus 162 ~~~~~~~~~----------------------------------------------------------------~~~~~v~ 177 (304)
+.+.+|++. +|...+.
T Consensus 765 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~ 844 (1249)
T 3sfz_A 765 GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQ 844 (1249)
T ss_dssp SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCC
T ss_pred CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceE
Confidence 667777542 4567788
Q ss_pred EEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecC---------
Q 036585 178 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVR--------- 248 (304)
Q Consensus 178 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~--------- 248 (304)
+++|+|+++++++++.+|.|++||+.+++....+. .|...|.+++|+|++++|++++.||.|++||+.
T Consensus 845 ~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~---~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~ 921 (1249)
T 3sfz_A 845 YCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCR---GHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIV 921 (1249)
T ss_dssp EEEECSSTTEEEEECSSSCEEEEETTTTEEEEEEC---CCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSS
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecC---CCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeec
Confidence 99999999999999999999999999998887776 688888888888888888888888888888753
Q ss_pred ----------------------------------------------------------------------CCceeeeeec
Q 036585 249 ----------------------------------------------------------------------SGKEVASWMS 258 (304)
Q Consensus 249 ----------------------------------------------------------------------~~~~~~~~~~ 258 (304)
+++....+.+
T Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~ 1001 (1249)
T 3sfz_A 922 LKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVG 1001 (1249)
T ss_dssp EEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCC
T ss_pred ccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeeccc
Confidence 2333444567
Q ss_pred cCCCCceEEeCCCCcEEEEecCc--eEEeccCCccccccccCCC
Q 036585 259 FDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSKLGAYVGRNR 300 (304)
Q Consensus 259 ~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~~~~~~~~~~ 300 (304)
|...|++++|+|++++|++++.| +++|++.........+|..
T Consensus 1002 h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 1045 (1249)
T 3sfz_A 1002 HKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQE 1045 (1249)
T ss_dssp CSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSS
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCC
Confidence 88888999999999999988888 8888887766555554443
No 55
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-39 Score=270.51 Aligned_cols=239 Identities=14% Similarity=0.084 Sum_probs=195.3
Q ss_pred eeEeeccc------CcEEEEeeCCCeEEEEecCCcce-----------eeeecccccceeEEEEccCCCeEEEEecCCCC
Q 036585 19 EILQSMEV------GIYLVTASDDESIRLYDVTAATC-----------LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD 81 (304)
Q Consensus 19 ~~i~~~~~------~~~l~~~~~d~~i~vw~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d 81 (304)
..+.|+|+ +.+||+++.||+|++||+.+++. ...+.+|...|.+++|++++ .|++|+. |
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~---D 286 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFK---N 286 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEET---T
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeC---C
Confidence 34778886 57999999999999999986542 24677899999999999864 8999998 9
Q ss_pred CceEEEEccCce-eeeecccccccEEEE--EEcCCC-CEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEE
Q 036585 82 ESLRLLSLHDNK-YSRYFKGHHDRVVLL--SLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVF 157 (304)
Q Consensus 82 ~~i~vwd~~~~~-~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (304)
|+|++||+++++ +...+.+|...|.++ .|+|++ .+|++++.|++|++||+++++....+..+.
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~------------- 353 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF------------- 353 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC-------------
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc-------------
Confidence 999999999764 455688999999999 577887 899999999999999999887765554221
Q ss_pred EecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec
Q 036585 158 GYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 237 (304)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 237 (304)
....+.+++|+|+++.+++++.|++|++||++++.....+. +|...|++++|+|++++|++|+
T Consensus 354 --------------~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~---gH~~~V~sva~Sp~g~~l~Sgs 416 (524)
T 2j04_B 354 --------------RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV---SRETTITAIGVSRLHPMVLAGS 416 (524)
T ss_dssp --------------SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE---ECSSCEEEEECCSSCCBCEEEE
T ss_pred --------------ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee---cCCCceEEEEeCCCCCeEEEEE
Confidence 11247889999999999999999999999999998888777 6899999999999999999999
Q ss_pred CCCcEEEEecCCC--------------------------------------------ceeeeeeccCCCCceEEeCCCCc
Q 036585 238 GDGSVHAWSVRSG--------------------------------------------KEVASWMSFDTEPPVIKWAPGSL 273 (304)
Q Consensus 238 ~dg~i~v~d~~~~--------------------------------------------~~~~~~~~~~~~i~~~~~~~~~~ 273 (304)
.||+|++||+... ..+..+.+|..+|.+++|+|++.
T Consensus 417 ~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~ 496 (524)
T 2j04_B 417 ADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSA 496 (524)
T ss_dssp TTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTT
T ss_pred CCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCC
Confidence 9999999985321 11223456888999999999964
Q ss_pred ---EEEEecCc--eEEeccCCcc
Q 036585 274 ---MFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 274 ---~l~s~~~d--~~iw~~~~~~ 291 (304)
.+|+|+.+ ++||.++.+.
T Consensus 497 ~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 497 GGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp TTTEEEEECTTSEEEEEECSCC-
T ss_pred ccHHHHhhccCceEEEEEccccc
Confidence 99999998 9999988764
No 56
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.9e-39 Score=260.79 Aligned_cols=249 Identities=15% Similarity=0.251 Sum_probs=208.5
Q ss_pred CeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCE
Q 036585 37 ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDC 116 (304)
Q Consensus 37 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 116 (304)
..+..|+..+..+.+++.+|.+.|.+++|+|++++|++++. |++|++||+.+++....+..|...|.+++|+|++++
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~---D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~ 122 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQ---DGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQS 122 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEET---TSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSE
T ss_pred ccccccccceeEEeecccccccEEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCccceEEecCCCCEEEEEECCCCCE
Confidence 34566888888889999999999999999999999999998 999999999999999999999999999999999999
Q ss_pred EEEcccCCeEEEEeCCccee-------eceEEEecc--ceeEecCC---CeEEEecCCCeEEEEec--------------
Q 036585 117 FISGSLDRTVLLWDQRAEKC-------QGLLRVQGR--PAAAYDDQ---GLVFGYEKGPLDIFSVG-------------- 170 (304)
Q Consensus 117 l~~~~~dg~i~iwd~~~~~~-------~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~-------------- 170 (304)
|++++.|+.+++||+.+... ...+..+.. ..+.+.++ ..+.+..++.+++|++.
T Consensus 123 las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~ 202 (380)
T 3iz6_a 123 VACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPS 202 (380)
T ss_dssp EEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSS
T ss_pred EEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCC
Confidence 99999999999999875321 111222211 22344443 35667788899999753
Q ss_pred CCCCCceEEEEec-CCcEEEEeeCCCeEEEEEcC-CCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecC
Q 036585 171 GDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVR 248 (304)
Q Consensus 171 ~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~ 248 (304)
+|...|.+++|+| ++.+|++|+.||.|++||++ .++....+. +|...|++++|+|++++|++|+.||.|++||++
T Consensus 203 ~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 203 GHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYH---GHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp SCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEEC---CCSSCCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred CCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEEC---CcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 5778899999977 88999999999999999998 446666666 789999999999999999999999999999999
Q ss_pred CCceeeeeeccC-------CCCceEEeCCCCcEEEEecCc--eEEeccCCcc
Q 036585 249 SGKEVASWMSFD-------TEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 249 ~~~~~~~~~~~~-------~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
+++.+..+..+. ..|++++|+|++++|++|+.| +++|+....+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~ 331 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAE 331 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCC
T ss_pred CCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCc
Confidence 998887775433 348999999999999999998 9999986543
No 57
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.8e-38 Score=250.10 Aligned_cols=238 Identities=15% Similarity=0.228 Sum_probs=206.7
Q ss_pred cceeeeecccccceeEEEEccCC-CeEEEEecCCCCCceEEEEccC-----ceeeeecccccccEEEEEEcCCCCEEEEc
Q 036585 47 ATCLKTINSKKYGVDLVCFTSHP-TTVIYSSKNGWDESLRLLSLHD-----NKYSRYFKGHHDRVVLLSLCSSKDCFISG 120 (304)
Q Consensus 47 ~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~d~~i~vwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 120 (304)
..+..++.+|.+.|.+++|+|++ +.|++++. |++|++|++.. +.++..+.+|...|.+++|+|++++|+++
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~---D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASR---DKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSA 83 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEET---TSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecC---CccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEE
Confidence 34556789999999999999965 78999998 99999999864 34567888999999999999999999999
Q ss_pred ccCCeEEEEeCCcceeeceEEEeccc--eeEecCCC--eEEEecCCCeEEEEec--------CCCCCceEEEEecC----
Q 036585 121 SLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQG--LVFGYEKGPLDIFSVG--------GDISDANVVKFSND---- 184 (304)
Q Consensus 121 ~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~---- 184 (304)
+.|++|++||+++++....+..+... .+.+++++ .+.+..++.+++|++. +|...+.+++|+|.
T Consensus 84 s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC----
T ss_pred eCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCC
Confidence 99999999999999888777655443 45677776 4457778899999864 57788999999985
Q ss_pred --CcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCC
Q 036585 185 --GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTE 262 (304)
Q Consensus 185 --~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~ 262 (304)
+..+++++.|+.|++||+++.+....+. +|...|.+++|+|++++|++++.||.|++||+.+++.+..+.. ..+
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~---~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~ 239 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFI---GHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDE 239 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEEC---CCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CSC
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeec---CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCc
Confidence 4489999999999999999998887777 7899999999999999999999999999999999998888874 468
Q ss_pred CceEEeCCCCcEEEEecCc-eEEeccCCcc
Q 036585 263 PPVIKWAPGSLMFVTGSSE-LSFWIPDLSK 291 (304)
Q Consensus 263 i~~~~~~~~~~~l~s~~~d-~~iw~~~~~~ 291 (304)
|.+++|+|++.+|++++.+ +++|+++...
T Consensus 240 v~~~~~sp~~~~la~~~~~~i~v~~~~~~~ 269 (319)
T 3frx_A 240 VFSLAFSPNRYWLAAATATGIKVFSLDPQY 269 (319)
T ss_dssp EEEEEECSSSSEEEEEETTEEEEEEETTEE
T ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEeCcCe
Confidence 9999999999999999888 9999987654
No 58
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=244.18 Aligned_cols=259 Identities=16% Similarity=0.208 Sum_probs=214.2
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeec--ccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
..+.|++++ +||+| .|++|+|||++++++++.+. +|...|.+++|+|++++|++|+. |+.|++||+++++.+.
T Consensus 29 ~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~---Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 29 NLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRLR 103 (318)
T ss_dssp BCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEE
T ss_pred eEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEEC---CCcEEEeecCCceeEE
Confidence 568888876 77766 58999999999999887765 57778999999999999999998 9999999999999999
Q ss_pred ecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeec-eEEEecc--ceeEecCCC--eEEEecCCCeEEEEecC
Q 036585 97 YFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQG-LLRVQGR--PAAAYDDQG--LVFGYEKGPLDIFSVGG 171 (304)
Q Consensus 97 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~ 171 (304)
.+.+|...+.++.+ ++..+++++.++.+++|+........ .+..+.. ....+.+++ .+.+..++.+++|++..
T Consensus 104 ~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 104 NMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAP 181 (318)
T ss_dssp EEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSC
T ss_pred EecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCC
Confidence 99999998887665 56799999999999999987764432 2222222 234555555 44567788999998753
Q ss_pred -------------CCCCceEEEEecCCcEE---EEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEE
Q 036585 172 -------------DISDANVVKFSNDGRLM---LLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS 235 (304)
Q Consensus 172 -------------~~~~v~~~~~~~~~~~l---~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 235 (304)
+...+..++++|++..+ ++++.++.|++||.+......... +...+..+.|+|+++.+++
T Consensus 182 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 182 GEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD----AHSQVCSILWSPHYKELIS 257 (318)
T ss_dssp BTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE----CSSCEEEEEEETTTTEEEE
T ss_pred CcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc----ceeeeeeeeecccccceEE
Confidence 45678889999876533 456788999999999888777765 6778999999999988776
Q ss_pred e--cCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 236 G--SGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 236 ~--~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
+ +.|+.|++||+++++++..+.+|.++|++++|+|++++|+||+.| ++||++.
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 5 479999999999999999999999999999999999999999999 9999873
No 59
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.5e-38 Score=270.51 Aligned_cols=263 Identities=16% Similarity=0.214 Sum_probs=222.3
Q ss_pred eeEeecccCc-EEEEeeCCCeEEEEecCCcceeeeeccccc---ceeEEEEccC-CCeEEEEecCCCCCceEEEEccCce
Q 036585 19 EILQSMEVGI-YLVTASDDESIRLYDVTAATCLKTINSKKY---GVDLVCFTSH-PTTVIYSSKNGWDESLRLLSLHDNK 93 (304)
Q Consensus 19 ~~i~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~~~~d~~i~vwd~~~~~ 93 (304)
..+.++|+++ ++++++.|+.|++||+.+++.+..+..|.. .|.+++|+|+ ++++++++. |+.|++||+.+++
T Consensus 164 ~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 164 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS---DRKISCFDGKSGE 240 (615)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET---TCCEEEEETTTCC
T ss_pred EEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC---CCeEEEEECCCCC
Confidence 3467888887 899999999999999999999999999998 9999999999 999999998 9999999999999
Q ss_pred eeeec-c---cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEec-------------------------
Q 036585 94 YSRYF-K---GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG------------------------- 144 (304)
Q Consensus 94 ~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------------------- 144 (304)
.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+++++....+....
T Consensus 241 ~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 319 (615)
T 1pgu_A 241 FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 319 (615)
T ss_dssp EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTS
T ss_pred EeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCC
Confidence 98888 5 799999999999 99999999999999999998776554433220
Q ss_pred ----------cc---------------------------------------------eeEec---------CC-------
Q 036585 145 ----------RP---------------------------------------------AAAYD---------DQ------- 153 (304)
Q Consensus 145 ----------~~---------------------------------------------~~~~~---------~~------- 153 (304)
.. .+.+. .+
T Consensus 320 ~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~ 399 (615)
T 1pgu_A 320 TLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNG 399 (615)
T ss_dssp CEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETT
T ss_pred CEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEE
Confidence 00 00000 00
Q ss_pred ----------------------------------------------------------CeEEEec-CCCeEEEEe-----
Q 036585 154 ----------------------------------------------------------GLVFGYE-KGPLDIFSV----- 169 (304)
Q Consensus 154 ----------------------------------------------------------~~~~~~~-~~~~~~~~~----- 169 (304)
..+.+.. ++.+.+|++
T Consensus 400 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~ 479 (615)
T 1pgu_A 400 ITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEV 479 (615)
T ss_dssp EEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEE
T ss_pred cccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccc
Confidence 0111222 566666654
Q ss_pred -----cCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCC-CCCcceEEEEcC----------CCcEE
Q 036585 170 -----GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV-SRNSTLEASFSP----------EGMFV 233 (304)
Q Consensus 170 -----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~-~~~~i~~~~~s~----------~~~~l 233 (304)
..|...|.+++|+|++++|++++.||.|++||+.+++.+..+. . |...|++++|+| ++++|
T Consensus 480 ~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~---~~h~~~v~~~~~sp~~~~~~~~~~~~~~l 556 (615)
T 1pgu_A 480 SFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRW---AFRTSKINAISWKPAEKGANEEEIEEDLV 556 (615)
T ss_dssp EEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCS---CCCSSCEEEEEECCCC------CCSCCEE
T ss_pred cccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEee---cCCCCceeEEEEcCccccccccccCCCEE
Confidence 3467889999999999999999999999999999998877665 4 889999999999 99999
Q ss_pred EEecCCCcEEEEecCCC-ceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCC
Q 036585 234 ISGSGDGSVHAWSVRSG-KEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 234 ~~~~~dg~i~v~d~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~ 289 (304)
++++.||.|++||+.++ +++..+.+|...|++++|+|+++ |++++.| +++|+++.
T Consensus 557 ~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 557 ATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred EEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 99999999999999987 78888999999999999999999 9999998 99999865
No 60
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.3e-38 Score=263.38 Aligned_cols=270 Identities=14% Similarity=0.134 Sum_probs=207.1
Q ss_pred eeEeecc-cCcEEEEeeCCCeEEEEecCCcce--eeeecccccceeEEEEcc-CCCeEEEEecCCCCCceEEEEccCcee
Q 036585 19 EILQSME-VGIYLVTASDDESIRLYDVTAATC--LKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNKY 94 (304)
Q Consensus 19 ~~i~~~~-~~~~l~~~~~d~~i~vw~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~~ 94 (304)
..+.|+| ++++||+|+.||.|+|||+.+++. ...+.+|.+.|.+++|+| ++.+|++++. |++|++||++++..
T Consensus 123 ~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~---D~~v~iwd~~~~~~ 199 (435)
T 4e54_B 123 TSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSM---EGTTRLQDFKGNIL 199 (435)
T ss_dssp EEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECS---SSCEEEEETTSCEE
T ss_pred EEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeC---CCEEEEeeccCCce
Confidence 4578888 467999999999999999987654 445668999999999998 6889999998 99999999987654
Q ss_pred eeecc--cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEec--cceeEecCCC---eEEEecCCCeEEE
Q 036585 95 SRYFK--GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG--RPAAAYDDQG---LVFGYEKGPLDIF 167 (304)
Q Consensus 95 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~ 167 (304)
..... .+...+.+++|+|++++|++|+.||.|++||++.. ....+..+. ...+.+++++ .+.+..++.+++|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw 278 (435)
T 4e54_B 200 RVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW 278 (435)
T ss_dssp EEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE
T ss_pred eEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEecCcceeeEE
Confidence 33333 23446789999999999999999999999999754 333343332 2346677765 2346678999999
Q ss_pred Eec------------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCC---CCCcceEEEEcCCCcE
Q 036585 168 SVG------------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV---SRNSTLEASFSPEGMF 232 (304)
Q Consensus 168 ~~~------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~---~~~~i~~~~~s~~~~~ 232 (304)
++. +|...|++++|+|+|++|++++.||.|++||+++++....+..+.. ....+....|+|++.+
T Consensus 279 d~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (435)
T 4e54_B 279 DLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNL 358 (435)
T ss_dssp ETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSC
T ss_pred ecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCE
Confidence 864 3677899999999999999999999999999999887766652211 1112334566776666
Q ss_pred EEEec------------CCCcEEEEecCCCceeeee-eccCCCCceE-EeCCCCcEEEEecCc-eEEeccCCccc
Q 036585 233 VISGS------------GDGSVHAWSVRSGKEVASW-MSFDTEPPVI-KWAPGSLMFVTGSSE-LSFWIPDLSKL 292 (304)
Q Consensus 233 l~~~~------------~dg~i~v~d~~~~~~~~~~-~~~~~~i~~~-~~~~~~~~l~s~~~d-~~iw~~~~~~~ 292 (304)
++++. .++.|++||..+++.+..+ .+|...|.++ +|+|+|++|++|+.+ ++||+++..+.
T Consensus 359 ~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 359 IVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAMGYHILIWSQQEART 433 (435)
T ss_dssp EEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEECSSEEEECCCC----
T ss_pred EEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCee
Confidence 66553 3457999999999988776 4688889888 699999999999877 99999876554
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=9.3e-38 Score=249.64 Aligned_cols=267 Identities=13% Similarity=0.142 Sum_probs=221.8
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
...+.++|+|++++++..++.+.+|............+|...|.+++|+|+++++++++ |+.|++||+.+++....
T Consensus 12 v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~----dg~i~iw~~~~~~~~~~ 87 (337)
T 1gxr_A 12 AYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG----KGCVKVWDISHPGNKSP 87 (337)
T ss_dssp CCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC----BSEEEEEETTSTTCCSC
T ss_pred eeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC----CCeEEEEECCCCCceee
Confidence 34588999999999998888777777665555555557999999999999999999987 89999999987754333
Q ss_pred c---c--cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeec--eEEEecc--ceeEecCCC--eEEEecCCCeEE
Q 036585 98 F---K--GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQG--LLRVQGR--PAAAYDDQG--LVFGYEKGPLDI 166 (304)
Q Consensus 98 ~---~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~ 166 (304)
+ . .|...|.+++|+|+++++++++.|+.|++||+++++... .+..+.. ..+.+++++ .+.+..++.+.+
T Consensus 88 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~ 167 (337)
T 1gxr_A 88 VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167 (337)
T ss_dssp SEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEE
Confidence 2 2 688999999999999999999999999999999877333 3332222 246677776 344667788888
Q ss_pred EEec---------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec
Q 036585 167 FSVG---------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 237 (304)
Q Consensus 167 ~~~~---------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 237 (304)
|++. .|...+.+++|+|++++|++++.||.|++||+++++....+. +...+.+++|+|++++|++++
T Consensus 168 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD----FTSQIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEECTTSSEEEEEE
T ss_pred EeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec----CCCceEEEEECCCCCEEEEEc
Confidence 8754 477899999999999999999999999999999999888876 678899999999999999999
Q ss_pred CCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcccc
Q 036585 238 GDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSKLG 293 (304)
Q Consensus 238 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~~~ 293 (304)
.|+.|++||+++++. ..+..|..+|.+++|+|++++|++++.| +++|+++..+..
T Consensus 244 ~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 244 ESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp TTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 999999999988775 4567899999999999999999999988 999998765544
No 62
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.9e-38 Score=259.99 Aligned_cols=247 Identities=12% Similarity=0.139 Sum_probs=207.5
Q ss_pred eeeccee---eEeecc-cCcEEEEeeCCCeEEEEecCCc-------ceeeeecccccceeEEEEccCC-CeEEEEecCCC
Q 036585 13 SLELSEE---ILQSME-VGIYLVTASDDESIRLYDVTAA-------TCLKTINSKKYGVDLVCFTSHP-TTVIYSSKNGW 80 (304)
Q Consensus 13 ~~~~~~~---~i~~~~-~~~~l~~~~~d~~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~ 80 (304)
.+.+|.. .+.++| ++++|++++.||.|++||+.++ +.+..+.+|...|.+++|+|++ ..|++++.
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~--- 152 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC--- 152 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET---
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC---
Confidence 3445544 467888 8999999999999999999987 6678899999999999999998 68889988
Q ss_pred CCceEEEEccCceeeeec--ccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEE
Q 036585 81 DESLRLLSLHDNKYSRYF--KGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFG 158 (304)
Q Consensus 81 d~~i~vwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (304)
|+.|++||+.+++.+..+ ..|...|.+++|+|++++|++++.|+.|++||+++++....+.
T Consensus 153 dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----------------- 215 (402)
T 2aq5_A 153 DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKD----------------- 215 (402)
T ss_dssp TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE-----------------
T ss_pred CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeec-----------------
Confidence 999999999999999888 7899999999999999999999999999999999887655542
Q ss_pred ecCCCeEEEEecCCCC-CceEEEEecCCcEEEEe---eCCCeEEEEEcCCCce-eEEEEeCCCCCCcceEEEEcCCCcEE
Q 036585 159 YEKGPLDIFSVGGDIS-DANVVKFSNDGRLMLLT---TMEGHIHVLDSFRGTL-LSTYNVKPVSRNSTLEASFSPEGMFV 233 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~---~~dg~i~~~d~~~~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l 233 (304)
..|.. .+..+.|+|++++|+++ +.|+.|++||+++++. ...... .+...+.+++|+|++++|
T Consensus 216 -----------~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l 282 (402)
T 2aq5_A 216 -----------RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL--DTSSGVLLPFFDPDTNIV 282 (402)
T ss_dssp -----------CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC--CCCSSCEEEEEETTTTEE
T ss_pred -----------cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec--cCCCceeEEEEcCCCCEE
Confidence 13434 38899999999999999 7899999999988765 333332 366789999999999998
Q ss_pred E-EecCCCcEEEEecCCCce-eeeeec--cCCCCceEEeCCCCcEEEEecCceEEeccCCccc
Q 036585 234 I-SGSGDGSVHAWSVRSGKE-VASWMS--FDTEPPVIKWAPGSLMFVTGSSELSFWIPDLSKL 292 (304)
Q Consensus 234 ~-~~~~dg~i~v~d~~~~~~-~~~~~~--~~~~i~~~~~~~~~~~l~s~~~d~~iw~~~~~~~ 292 (304)
+ +++.||.|++||+.++++ +..+.. |..+|.+++|+|++.++++++..+++|++....+
T Consensus 283 ~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 283 YLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERKC 345 (402)
T ss_dssp EEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGGGTEEEEEEEEETTEE
T ss_pred EEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEecccccceecceeEEEEEcCCCcE
Confidence 6 566799999999998874 555544 4589999999999999887666699999876554
No 63
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.1e-38 Score=260.33 Aligned_cols=258 Identities=13% Similarity=0.059 Sum_probs=185.6
Q ss_pred ecccCcEEEEeeCCCeEEEEecCCcce-----eeeecccccceeEEEEcc--------CCCeEEEEecCCCCCceEEEEc
Q 036585 23 SMEVGIYLVTASDDESIRLYDVTAATC-----LKTINSKKYGVDLVCFTS--------HPTTVIYSSKNGWDESLRLLSL 89 (304)
Q Consensus 23 ~~~~~~~l~~~~~d~~i~vw~~~~~~~-----~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~~~~d~~i~vwd~ 89 (304)
+.+++++|++++.|++|++||.++++. +..+.+|.+.|.+++|+| ++++|++++. |++|+|||+
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~---D~tv~~Wd~ 173 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD---DCTLIIWRL 173 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET---TSEEEEEEE
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC---CCeEEEEEC
Confidence 445678999999999999999988754 345789999999999998 7889999998 999999999
Q ss_pred cCceeeeecccccccEEEEEEcCCCC-EEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEE
Q 036585 90 HDNKYSRYFKGHHDRVVLLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFS 168 (304)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
.++.++..+..|..+|.+++|+|++. +|++++.|++|++||+++++............ .................
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~----~~~~~s~~~~~~~~~~~ 249 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVK----NPWLLTLNTLPLVNTCH 249 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CS----CCCSEEEESGGGC----
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcc----cceEEecccccceeeee
Confidence 99888888888999999999999874 89999999999999999887654433211110 00001111111122233
Q ss_pred ecCCCCCceEEEEe-cCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCC---------------CCCcceEEEEcC--CC
Q 036585 169 VGGDISDANVVKFS-NDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV---------------SRNSTLEASFSP--EG 230 (304)
Q Consensus 169 ~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~---------------~~~~i~~~~~s~--~~ 230 (304)
..+|...+.++.|+ |+++.+++++.|+++++||+..++....+..... .........|+| ++
T Consensus 250 ~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (393)
T 4gq1_A 250 SSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMD 329 (393)
T ss_dssp --CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTT
T ss_pred cccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCC
Confidence 34678889999987 7999999999999999999988766555431100 011122233444 45
Q ss_pred cEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc-eEEecc
Q 036585 231 MFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE-LSFWIP 287 (304)
Q Consensus 231 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-~~iw~~ 287 (304)
.++++|+.||.|++||+.+++.+..+..|..+|++++|+|||++||+++.+ +.+|.+
T Consensus 330 ~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL 387 (393)
T 4gq1_A 330 YFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRL 387 (393)
T ss_dssp EEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEE
T ss_pred EEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEE
Confidence 577888999999999999999988888899999999999999999999999 666644
No 64
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-37 Score=246.39 Aligned_cols=218 Identities=21% Similarity=0.369 Sum_probs=194.8
Q ss_pred cceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeE
Q 036585 47 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTV 126 (304)
Q Consensus 47 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 126 (304)
.....++.+|...|.+++|+|++++|++++. |+.|++|++.+++....+.+|...|.+++|+|++++|++++.|+.|
T Consensus 13 ~~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~---dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 13 YALKFTLAGHTKAVSSVKFSPNGEWLASSSA---DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred ceeEEEEcccCCcEEEEEECCCCCEEEEeeC---CCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 4556778899999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred EEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCc
Q 036585 127 LLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT 206 (304)
Q Consensus 127 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 206 (304)
++||+++++....+. +|...|.+++|+|++++|++++.||.|++||+++++
T Consensus 90 ~vwd~~~~~~~~~~~-----------------------------~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 140 (312)
T 4ery_A 90 KIWDVSSGKCLKTLK-----------------------------GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGK 140 (312)
T ss_dssp EEEETTTCCEEEEEE-----------------------------CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEECCCCcEEEEEc-----------------------------CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCE
Confidence 999999887655443 577889999999999999999999999999999999
Q ss_pred eeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeee-eccCCCCceEEeCCCCcEEEEecCc--eE
Q 036585 207 LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASW-MSFDTEPPVIKWAPGSLMFVTGSSE--LS 283 (304)
Q Consensus 207 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~s~~~d--~~ 283 (304)
....+. .|..++.+++|+|++++|++++.||.|++||+++++.+..+ ..+..++..++|+|++++|++++.| ++
T Consensus 141 ~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 217 (312)
T 4ery_A 141 CLKTLP---AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLK 217 (312)
T ss_dssp EEEEEC---CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEE
T ss_pred EEEEec---CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 888877 68889999999999999999999999999999999887766 4466789999999999999999988 99
Q ss_pred EeccCCcc-ccccccCC
Q 036585 284 FWIPDLSK-LGAYVGRN 299 (304)
Q Consensus 284 iw~~~~~~-~~~~~~~~ 299 (304)
+|++...+ +..+.+|.
T Consensus 218 iwd~~~~~~~~~~~~~~ 234 (312)
T 4ery_A 218 LWDYSKGKCLKTYTGHK 234 (312)
T ss_dssp EEETTTTEEEEEECSSC
T ss_pred EEECCCCcEEEEEEecC
Confidence 99986544 44555544
No 65
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.1e-37 Score=249.16 Aligned_cols=248 Identities=14% Similarity=0.222 Sum_probs=208.4
Q ss_pred ceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEE
Q 036585 48 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVL 127 (304)
Q Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 127 (304)
+...++.+|...|.+++|+|++++|++++. |+.|++||..+++....+..|...|.+++|+|++.++++++.|+.++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~---Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~ 131 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQ---DGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCS 131 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeC---CCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEE
Confidence 556788999999999999999999999998 99999999999988888888999999999999999999999999999
Q ss_pred EEeCCcce------eeceEEEecc--ceeEecCCC--eEEEecCCCeEEEEec---------CCCCCceEEEEec--CCc
Q 036585 128 LWDQRAEK------CQGLLRVQGR--PAAAYDDQG--LVFGYEKGPLDIFSVG---------GDISDANVVKFSN--DGR 186 (304)
Q Consensus 128 iwd~~~~~------~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~--~~~ 186 (304)
+|++.... ....+..+.. ..+.+.+++ .+.+..++.+++|++. +|...|.+++|+| +++
T Consensus 132 v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 132 VYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp EEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 99986432 1222332322 245666665 4557778888888754 5788899999987 578
Q ss_pred EEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeecc--CCCCc
Q 036585 187 LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSF--DTEPP 264 (304)
Q Consensus 187 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~--~~~i~ 264 (304)
+|++|+.||.|++||+++++.+..+. .|...|++++|+|++++|++++.|+.|++||+++++.+..+..+ ...+.
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~---~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~ 288 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFE---THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGAS 288 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC---CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEec---CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCccccee
Confidence 99999999999999999999888887 68899999999999999999999999999999988777666433 34688
Q ss_pred eEEeCCCCcEEEEecCc--eEEeccC-CccccccccCCCC
Q 036585 265 VIKWAPGSLMFVTGSSE--LSFWIPD-LSKLGAYVGRNRG 301 (304)
Q Consensus 265 ~~~~~~~~~~l~s~~~d--~~iw~~~-~~~~~~~~~~~~g 301 (304)
+++|+|++++|++++.| +++|++. ...+..+.+|...
T Consensus 289 ~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~ 328 (354)
T 2pbi_B 289 SVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENR 328 (354)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC
T ss_pred EEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCc
Confidence 99999999999999998 9999984 4455666676654
No 66
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.6e-37 Score=245.89 Aligned_cols=236 Identities=15% Similarity=0.221 Sum_probs=198.6
Q ss_pred ceeeeecccccceeEEEE-----cc-CCCeEEEEecCCCCCceEEEEccCc-------eeeeecccccccEEEEEEcCCC
Q 036585 48 TCLKTINSKKYGVDLVCF-----TS-HPTTVIYSSKNGWDESLRLLSLHDN-------KYSRYFKGHHDRVVLLSLCSSK 114 (304)
Q Consensus 48 ~~~~~~~~~~~~v~~~~~-----~~-~~~~l~~~~~~~~d~~i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~ 114 (304)
++...+.+|...|.+++| ++ ++++|++++. |++|++||+.+. .+...+.+|...|.+++|+|++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~---D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~ 88 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSR---DKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN 88 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEET---TSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcC---CCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC
Confidence 456778999999999999 76 8999999998 999999999753 4566788999999999999999
Q ss_pred CEEEEcccCCeEEEEeCCcceeeceEEEeccc--eeEecCCC--eEEEecCCCeEEEEec-----------CCCCCceEE
Q 036585 115 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQG--LVFGYEKGPLDIFSVG-----------GDISDANVV 179 (304)
Q Consensus 115 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~-----------~~~~~v~~~ 179 (304)
.++++++.|++|++||+++++....+..+... .+.+++++ .+.+..++.+++|++. .|...+.++
T Consensus 89 ~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~ 168 (343)
T 2xzm_R 89 CFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCV 168 (343)
T ss_dssp TEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEE
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeee
Confidence 99999999999999999999887777654433 56788877 4446778999999874 467789999
Q ss_pred EEecCC----------cEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCC
Q 036585 180 KFSNDG----------RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRS 249 (304)
Q Consensus 180 ~~~~~~----------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~ 249 (304)
+|+|++ .+|++++.||.|++|| .+.+....+. .|...|.+++|+|++++|++|+.||.|++||+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~---~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 169 RYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFK---AHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEE---CCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred eeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEc---CccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 999987 7899999999999999 4556666666 6889999999999999999999999999999954
Q ss_pred Cc-eeeeeeccCCCCceEEeCCCCcEEEEecCc-eEEeccCCcc
Q 036585 250 GK-EVASWMSFDTEPPVIKWAPGSLMFVTGSSE-LSFWIPDLSK 291 (304)
Q Consensus 250 ~~-~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-~~iw~~~~~~ 291 (304)
.. +...+ .+...|.+++|+|++.++++++.+ +++|++...+
T Consensus 245 ~~~~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 245 LTYPQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQS 287 (343)
T ss_dssp CSSCSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCC
T ss_pred Ccccceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 43 33333 356679999999999999877766 9999986543
No 67
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=252.17 Aligned_cols=211 Identities=13% Similarity=0.229 Sum_probs=181.4
Q ss_pred cceeeeeccccc-ceeEEEEccCCCeEEEEecCCCCCceEEEEccCceee---eecccccccEEEEEEcCCCCEEEEccc
Q 036585 47 ATCLKTINSKKY-GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYS---RYFKGHHDRVVLLSLCSSKDCFISGSL 122 (304)
Q Consensus 47 ~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~ 122 (304)
.+++.++.+|.. .|.+++|+|++++|++++. |+.|++||+.+++.. ....+|...|.+++|+|++++|++++.
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~las~~~---D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLASCGG---DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEEEEET---TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEEEEcC---CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC
Confidence 456778889987 8999999999999999998 999999999887643 223679999999999999999999999
Q ss_pred CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEc
Q 036585 123 DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDS 202 (304)
Q Consensus 123 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~ 202 (304)
|+++++||+..+.... +..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 82 D~~v~iw~~~~~~~~~---------------------------~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~ 134 (345)
T 3fm0_A 82 DATTCIWKKNQDDFEC---------------------------VTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEV 134 (345)
T ss_dssp TSCEEEEEECCC-EEE---------------------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCcEEEEEccCCCeEE---------------------------EEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEEC
Confidence 9999999987653221 1223478899999999999999999999999999999
Q ss_pred CCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCc--eeeeeeccCCCCceEEeCCCCcEEEEecC
Q 036585 203 FRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGK--EVASWMSFDTEPPVIKWAPGSLMFVTGSS 280 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~~ 280 (304)
+++...........|...|.+++|+|++++|++++.|+.|++||+++++ +...+.+|...|++++|+|++++|++++.
T Consensus 135 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 135 DEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp CTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC
Confidence 8775443333333688999999999999999999999999999998775 35678899999999999999999999999
Q ss_pred c--eEEecc
Q 036585 281 E--LSFWIP 287 (304)
Q Consensus 281 d--~~iw~~ 287 (304)
| ++||+.
T Consensus 215 D~~v~iW~~ 223 (345)
T 3fm0_A 215 DRTVRIWRQ 223 (345)
T ss_dssp TSCEEEEEE
T ss_pred CCeEEEecc
Confidence 9 999985
No 68
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-38 Score=277.01 Aligned_cols=244 Identities=14% Similarity=0.182 Sum_probs=208.1
Q ss_pred eeecceee---EeecccCcEEEEeeCCCeEEEEecC--CcceeeeecccccceeEEEEccC--CCeEEEEecCCCCCceE
Q 036585 13 SLELSEEI---LQSMEVGIYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFTSH--PTTVIYSSKNGWDESLR 85 (304)
Q Consensus 13 ~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~d~~i~ 85 (304)
.+.+|.+. +.++++|++|++|+.||.|++||+. +++.+..+.+|..+|.+++|+|+ ++.+++++. ||.|+
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~---Dg~I~ 80 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY---DGKVL 80 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEET---TSCEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeC---CCeEE
Confidence 34555544 5677899999999999999999998 56778889999999999999988 999999998 99999
Q ss_pred EEEccCce--eeeecccccccEEEEEEcCC--CCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecC
Q 036585 86 LLSLHDNK--YSRYFKGHHDRVVLLSLCSS--KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEK 161 (304)
Q Consensus 86 vwd~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (304)
+||+.+++ .+..+.+|...|.+++|+|+ ++++++++.||.|++||++++........
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~------------------- 141 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII------------------- 141 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE-------------------
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe-------------------
Confidence 99999986 67778889999999999999 99999999999999999988754333321
Q ss_pred CCeEEEEecCCCCCceEEEEec-------------CCcEEEEeeCCCeEEEEEcCCCc----eeEEEEeCCCCCCcceEE
Q 036585 162 GPLDIFSVGGDISDANVVKFSN-------------DGRLMLLTTMEGHIHVLDSFRGT----LLSTYNVKPVSRNSTLEA 224 (304)
Q Consensus 162 ~~~~~~~~~~~~~~v~~~~~~~-------------~~~~l~~~~~dg~i~~~d~~~~~----~~~~~~~~~~~~~~i~~~ 224 (304)
.+|...|.+++|+| ++.++++++.||.|++||++++. ....+. .|...|+++
T Consensus 142 --------~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~---~h~~~V~~l 210 (753)
T 3jro_A 142 --------DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE---GHSDWVRDV 210 (753)
T ss_dssp --------ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC---CCSSCEEEE
T ss_pred --------ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec---CCCCcEEEE
Confidence 25778899999999 58999999999999999998874 333333 688999999
Q ss_pred EEcCC---CcEEEEecCCCcEEEEecCCCc-----eeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCC
Q 036585 225 SFSPE---GMFVISGSGDGSVHAWSVRSGK-----EVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 225 ~~s~~---~~~l~~~~~dg~i~v~d~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~ 289 (304)
+|+|+ +++|++++.||.|++||+++++ .......|...|++++|+|++++|++++.| +++|+++.
T Consensus 211 ~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 211 AWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred EeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 99999 9999999999999999998864 334445688999999999999999999998 89998874
No 69
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.3e-37 Score=256.91 Aligned_cols=242 Identities=13% Similarity=0.246 Sum_probs=205.0
Q ss_pred eeEeeccc-CcEEEEeeCCCeEEEEecCC----------cceeeeecccccceeEEEEccCCC-eEEEEecCCCCCceEE
Q 036585 19 EILQSMEV-GIYLVTASDDESIRLYDVTA----------ATCLKTINSKKYGVDLVCFTSHPT-TVIYSSKNGWDESLRL 86 (304)
Q Consensus 19 ~~i~~~~~-~~~l~~~~~d~~i~vw~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~d~~i~v 86 (304)
..+.++|+ +++|++++.||.|++|++.+ .+.+..+.+|...+.+++|+|++. .|++++. ||.|++
T Consensus 132 ~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~---dg~i~v 208 (430)
T 2xyi_A 132 NRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD---DHTICL 208 (430)
T ss_dssp SEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT---TSCEEE
T ss_pred EEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC---CCeEEE
Confidence 44778886 78999999999999999986 577888899999999999999998 8899988 999999
Q ss_pred EEccCcee-------eeecccccccEEEEEEcC-CCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEE
Q 036585 87 LSLHDNKY-------SRYFKGHHDRVVLLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFG 158 (304)
Q Consensus 87 wd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (304)
|++.++.. ...+.+|...|.+++|+| ++.+|++++.|+.|++||+++.......
T Consensus 209 wd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~------------------ 270 (430)
T 2xyi_A 209 WDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPS------------------ 270 (430)
T ss_dssp EETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCS------------------
T ss_pred EeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcce------------------
Confidence 99987322 455668999999999999 7789999999999999999976321111
Q ss_pred ecCCCeEEEEecCCCCCceEEEEecCCc-EEEEeeCCCeEEEEEcCC-CceeEEEEeCCCCCCcceEEEEcCCCc-EEEE
Q 036585 159 YEKGPLDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFR-GTLLSTYNVKPVSRNSTLEASFSPEGM-FVIS 235 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~ 235 (304)
..+..|...|++++|+|+++ ++++|+.||.|++||+++ .+.+..+. .|...|++++|+|+++ +|++
T Consensus 271 --------~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~---~h~~~v~~i~~sp~~~~~l~s 339 (430)
T 2xyi_A 271 --------HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE---SHKDEIFQVQWSPHNETILAS 339 (430)
T ss_dssp --------EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE---CCSSCEEEEEECSSCTTEEEE
T ss_pred --------eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee---cCCCCEEEEEECCCCCCEEEE
Confidence 11125778899999999987 688999999999999998 56677777 6889999999999985 6899
Q ss_pred ecCCCcEEEEecCC--------------CceeeeeeccCCCCceEEeCCCCc-EEEEecCc--eEEeccCCccc
Q 036585 236 GSGDGSVHAWSVRS--------------GKEVASWMSFDTEPPVIKWAPGSL-MFVTGSSE--LSFWIPDLSKL 292 (304)
Q Consensus 236 ~~~dg~i~v~d~~~--------------~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~~d--~~iw~~~~~~~ 292 (304)
++.|+.|++||+.. .+.+..+.+|...|++++|+|+++ +|++++.| ++||+++...+
T Consensus 340 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 340 SGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVY 413 (430)
T ss_dssp EETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHH
T ss_pred EeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccccc
Confidence 99999999999986 356677788999999999999999 88999888 89999876544
No 70
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.6e-38 Score=252.34 Aligned_cols=226 Identities=17% Similarity=0.238 Sum_probs=182.2
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceee----eecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLK----TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 94 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~ 94 (304)
..+.|+|++++ ++++.||+|+|||+.+++... ...+|...|.+++|+|++++|++++. |+.|++||+++++.
T Consensus 98 ~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~---dg~v~iwd~~~~~~ 173 (357)
T 4g56_B 98 TDVAWVSEKGI-LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK---DFSVKVWDLSQKAV 173 (357)
T ss_dssp EEEEEETTTEE-EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET---TSCEEEEETTTTEE
T ss_pred EEEEEcCCCCE-EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC---CCeEEEEECCCCcE
Confidence 34778888765 567789999999998876543 33478899999999999999999998 99999999999999
Q ss_pred eeecccccccEEEEEEcCCCC-EEEEcccCCeEEEEeCCcceeeceEEEec----cceeEecCCC---eEEEecCCCeEE
Q 036585 95 SRYFKGHHDRVVLLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQG----RPAAAYDDQG---LVFGYEKGPLDI 166 (304)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~ 166 (304)
+..+.+|...|.+++|+|++. ++++++.|+.|++||+++++....+.... ...+.++|++ .+.+..++.+++
T Consensus 174 ~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~ 253 (357)
T 4g56_B 174 LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSL 253 (357)
T ss_dssp EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEE
T ss_pred EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeE
Confidence 999999999999999999875 78999999999999999888766554322 2346677653 334677889999
Q ss_pred EEec---------CCCCCceEEEEecCC-cEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcC-CCcEEEE
Q 036585 167 FSVG---------GDISDANVVKFSNDG-RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP-EGMFVIS 235 (304)
Q Consensus 167 ~~~~---------~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~ 235 (304)
|++. +|...|++++|+|++ ++|++++.||+|++||+++++.+..+ .|...|++++|+| ++++|++
T Consensus 254 wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~----~H~~~V~~vafsP~d~~~l~s 329 (357)
T 4g56_B 254 VNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL----SHRDFVTGVAWSPLDHSKFTT 329 (357)
T ss_dssp EESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC----CCSSCEEEEEECSSSTTEEEE
T ss_pred EECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC----CCCCCEEEEEEeCCCCCEEEE
Confidence 9764 477899999999987 57899999999999999998877654 4889999999999 8999999
Q ss_pred ecCCCcEEEEecCCCce
Q 036585 236 GSGDGSVHAWSVRSGKE 252 (304)
Q Consensus 236 ~~~dg~i~v~d~~~~~~ 252 (304)
++.||.|++||+.+...
T Consensus 330 ~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 330 VGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EETTSCEEEEECC----
T ss_pred EcCCCeEEEEECCCCCc
Confidence 99999999999976433
No 71
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.8e-37 Score=256.64 Aligned_cols=256 Identities=15% Similarity=0.278 Sum_probs=217.5
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecc
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFK 99 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~ 99 (304)
+..+..++++|++|+.||.|++||+.+++.+..+.+|...|.+++| +++.+++++. ||.|++||+.+++.+..+.
T Consensus 136 v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~ 210 (435)
T 1p22_A 136 VYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSS---DSTVRVWDVNTGEMLNTLI 210 (435)
T ss_dssp EEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEET---TSCEEEEESSSCCEEEEEC
T ss_pred EEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcC---CCeEEEEECCCCcEEEEEc
Confidence 4566678999999999999999999999999999999999999999 7889999998 9999999999999999999
Q ss_pred cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeece---EEEeccc--eeEecCCCeEEEecCCCeEEEEec----
Q 036585 100 GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL---LRVQGRP--AAAYDDQGLVFGYEKGPLDIFSVG---- 170 (304)
Q Consensus 100 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~---- 170 (304)
+|...|.+++|++ ..+++++.||.|++||++++..... +..+... .+.++.+..+.+..++.+.+|++.
T Consensus 211 ~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 288 (435)
T 1p22_A 211 HHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEF 288 (435)
T ss_dssp CCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcE
Confidence 9999999999974 5999999999999999988765532 2222222 345555556667778888888754
Q ss_pred -----CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEE
Q 036585 171 -----GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAW 245 (304)
Q Consensus 171 -----~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~ 245 (304)
+|...+.++.+ +++++++|+.||.|++||+++++.+..+. .|...+.+++| ++++|++|+.||.|++|
T Consensus 289 ~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~~~~--~~~~l~sg~~dg~i~vw 361 (435)
T 1p22_A 289 VRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLE---GHEELVRCIRF--DNKRIVSGAYDGKIKVW 361 (435)
T ss_dssp EEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEEC---CCSSCEEEEEC--CSSEEEEEETTSCEEEE
T ss_pred EEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEe---CCcCcEEEEEe--cCCEEEEEeCCCcEEEE
Confidence 47788888888 47899999999999999999999988887 68899999998 78899999999999999
Q ss_pred ecCCCc---------eeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc
Q 036585 246 SVRSGK---------EVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 246 d~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
|+.+++ ++..+.+|.++|.+++| ++.+|++++.| +++|++....
T Consensus 362 d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~ 416 (435)
T 1p22_A 362 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDP 416 (435)
T ss_dssp EHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-----
T ss_pred ECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCC
Confidence 997765 78888999999999999 78889999988 9999986554
No 72
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-37 Score=258.24 Aligned_cols=271 Identities=14% Similarity=0.212 Sum_probs=216.2
Q ss_pred eeee-eccee---eEeecc-cCcEEEEeeCCCeEEEEecCC---cce---eeeecccccceeEEEEccCCCeEEEEecCC
Q 036585 11 KVSL-ELSEE---ILQSME-VGIYLVTASDDESIRLYDVTA---ATC---LKTINSKKYGVDLVCFTSHPTTVIYSSKNG 79 (304)
Q Consensus 11 ~~~~-~~~~~---~i~~~~-~~~~l~~~~~d~~i~vw~~~~---~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~ 79 (304)
...+ ++|.. .+.+++ ++++|++|+.||+|++||+.+ +.. ...+ .|...|.+++|+|+++.|++++.
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~-- 131 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSK-- 131 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEET--
T ss_pred EeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeC--
Confidence 4445 55543 467889 999999999999999999876 432 2222 58899999999999999999998
Q ss_pred CCCceEEEEcc---Cceeeeeccc------------ccccEEEEE--EcCCCCEEEEcccCCeEEEEeCCcceeeceEEE
Q 036585 80 WDESLRLLSLH---DNKYSRYFKG------------HHDRVVLLS--LCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV 142 (304)
Q Consensus 80 ~d~~i~vwd~~---~~~~~~~~~~------------~~~~v~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 142 (304)
|+.|++||+. +++....+.. +...+.++. +++++.+|++++.|+.|++||+++++....+..
T Consensus 132 -dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 210 (437)
T 3gre_A 132 -DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIEN 210 (437)
T ss_dssp -TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred -CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEcc
Confidence 9999999995 4444433322 345566666 557899999999999999999999988887775
Q ss_pred --e--ccceeEecCCC--eEEEecCCCeEEEEec----------CCCCCceEEEEe----cCCcEEEEeeCCCeEEEEEc
Q 036585 143 --Q--GRPAAAYDDQG--LVFGYEKGPLDIFSVG----------GDISDANVVKFS----NDGRLMLLTTMEGHIHVLDS 202 (304)
Q Consensus 143 --~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~----~~~~~l~~~~~dg~i~~~d~ 202 (304)
+ ....+.+++++ .+.+..++.+.+|++. .|...|.+++|+ |++.+|++++.||.|++||+
T Consensus 211 ~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 211 SPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp CGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred CCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 2 23356777777 4457778889999764 455678999555 56889999999999999999
Q ss_pred CCCceeEEEEeCC-----------------------CCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeec-
Q 036585 203 FRGTLLSTYNVKP-----------------------VSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMS- 258 (304)
Q Consensus 203 ~~~~~~~~~~~~~-----------------------~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~- 258 (304)
++++....+..+. .|...|++++|+ ++++|++|+.|+.|++||+++++....+.+
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 291 VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred CCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecc
Confidence 9999888887321 156679999999 779999999999999999999887766654
Q ss_pred ------------------------------------cCCCCceEEeCCC--CcEEEEecCc--eEEec
Q 036585 259 ------------------------------------FDTEPPVIKWAPG--SLMFVTGSSE--LSFWI 286 (304)
Q Consensus 259 ------------------------------------~~~~i~~~~~~~~--~~~l~s~~~d--~~iw~ 286 (304)
|...|++++|+++ +.+|++|+.| |+||.
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 370 SRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp --CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 8899999999 88884
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=4.6e-36 Score=248.98 Aligned_cols=265 Identities=19% Similarity=0.347 Sum_probs=228.2
Q ss_pred eeeeecceee--EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEE
Q 036585 11 KVSLELSEEI--LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 88 (304)
Q Consensus 11 ~~~~~~~~~~--i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd 88 (304)
...+.+|.+. ..+.++|++|++|+.||.|++||+.+++.+..+.+|...|.+++|+ ++.+++++. |+.|++||
T Consensus 111 ~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~---dg~i~vwd 185 (445)
T 2ovr_B 111 PKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGST---DRTLKVWN 185 (445)
T ss_dssp CEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEET---TSCEEEEE
T ss_pred eEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeC---CCeEEEEE
Confidence 3456667653 3456789999999999999999999999999999999999999996 679999998 99999999
Q ss_pred ccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccc--eeEecCCCeEEEecCCCeEE
Q 036585 89 LHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFGYEKGPLDI 166 (304)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 166 (304)
+.+++.+..+.+|...|.++.|+ ++.+++++.||.|++||+++++....+..+... .+.++.+..+.+..++.+.+
T Consensus 186 ~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i 263 (445)
T 2ovr_B 186 AETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKV 263 (445)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEE
T ss_pred CCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEE
Confidence 99999999999999999999996 568999999999999999998887777654443 34555566777888888988
Q ss_pred EEec---------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec
Q 036585 167 FSVG---------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 237 (304)
Q Consensus 167 ~~~~---------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 237 (304)
|++. +|...+.+++| ++.++++++.||.|++||+++++.+..+. .+...+.++.+ +++++++++
T Consensus 264 wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~--~~~~l~~~~ 336 (445)
T 2ovr_B 264 WDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT---GHQSLTSGMEL--KDNILVSGN 336 (445)
T ss_dssp EEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEEC---CCCSCEEEEEE--ETTEEEEEE
T ss_pred EECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEc---CCcccEEEEEE--eCCEEEEEe
Confidence 8753 57788999998 88999999999999999999999988887 67788887776 567999999
Q ss_pred CCCcEEEEecCCCceeeeeec---cCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc
Q 036585 238 GDGSVHAWSVRSGKEVASWMS---FDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 238 ~dg~i~v~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
.||.|++||+++++.+..+.. |..+|++++|+ +++|++++.| +++|++...+
T Consensus 337 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 337 ADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGE 393 (445)
T ss_dssp TTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCC
T ss_pred CCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCc
Confidence 999999999999999888876 88899999995 5799999988 9999987544
No 74
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.5e-37 Score=254.57 Aligned_cols=241 Identities=14% Similarity=0.242 Sum_probs=200.4
Q ss_pred eeEeecccCc-EEEEeeCCCeEEEEecCCc----ceeeeecccccceeEEEEcc-CCCeEEEEecCCCCCceEEEEccCc
Q 036585 19 EILQSMEVGI-YLVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDN 92 (304)
Q Consensus 19 ~~i~~~~~~~-~l~~~~~d~~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~ 92 (304)
..+.++++.. ++++++.||.|+||++.+. +.+..+.+|...|.+++|+| +++.|++++. |+.|++||+.++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~---dg~v~vw~~~~~ 114 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE---DCTVMVWEIPDG 114 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET---TSEEEEEECCTT
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC---CCeEEEEEccCC
Confidence 3456666654 4446789999999998654 24556788999999999999 8999999998 999999999987
Q ss_pred -------eeeeecccccccEEEEEEcCCC-CEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCe
Q 036585 93 -------KYSRYFKGHHDRVVLLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPL 164 (304)
Q Consensus 93 -------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (304)
+++..+.+|...|.+++|+|++ .+|++++.|+.|++||+++++....+.
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----------------------- 171 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG----------------------- 171 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC-----------------------
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe-----------------------
Confidence 5677888999999999999998 699999999999999999887654431
Q ss_pred EEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCc-ceEEEEcCCCcEEEEe---cCCC
Q 036585 165 DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNS-TLEASFSPEGMFVISG---SGDG 240 (304)
Q Consensus 165 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~-i~~~~~s~~~~~l~~~---~~dg 240 (304)
...|...|.+++|+|++++|++++.||.|++||+++++.+..+.. .|... +.+++|+|++++|++| +.|+
T Consensus 172 ----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 172 ----PDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDR--PHEGTRPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp ----TTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC--SSCSSSCCEEEECSTTEEEEEEECTTCCE
T ss_pred ----cCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeecc--CCCCCcceEEEEcCCCcEEEEeccCCCCc
Confidence 025778899999999999999999999999999999998888732 35444 8899999999999999 8999
Q ss_pred cEEEEecCCCce-eeee-eccCCCCceEEeCCCCcEEEE-ecCc--eEEeccCCcc
Q 036585 241 SVHAWSVRSGKE-VASW-MSFDTEPPVIKWAPGSLMFVT-GSSE--LSFWIPDLSK 291 (304)
Q Consensus 241 ~i~v~d~~~~~~-~~~~-~~~~~~i~~~~~~~~~~~l~s-~~~d--~~iw~~~~~~ 291 (304)
.|++||+++++. +... ..|...+.+++|+|++++|++ ++.| +++|+++..+
T Consensus 246 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 246 QVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred eEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 999999988664 3333 257788999999999999864 5456 9999998765
No 75
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.4e-37 Score=249.82 Aligned_cols=262 Identities=15% Similarity=0.113 Sum_probs=206.4
Q ss_pred ceeeeeccee---eEeecccCcEEEEeeCCCeEEEEecCCcceeee--ecccccceeEEEEccCCCeEEEEecCCCCCce
Q 036585 10 DKVSLELSEE---ILQSMEVGIYLVTASDDESIRLYDVTAATCLKT--INSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 84 (304)
Q Consensus 10 ~~~~~~~~~~---~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 84 (304)
....+..|.. .+.+++++++|++++.||.|++||+.+++.... +..|...|.+++|+|+++++++++. |+.|
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~v 120 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSG---SRVI 120 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEET---TSSE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeC---CCEE
Confidence 3444555543 477889999999999999999999988875444 4678889999999999999999998 9999
Q ss_pred EEEEccCcee----eeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEec
Q 036585 85 RLLSLHDNKY----SRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYE 160 (304)
Q Consensus 85 ~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (304)
++||+..++. ......|...|.+++|+|++++|++++.|+.|++||++........... .+.. ..
T Consensus 121 ~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-----~~~~------~~ 189 (372)
T 1k8k_C 121 SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPT-----PWGS------KM 189 (372)
T ss_dssp EEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCB-----TTBS------CC
T ss_pred EEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccccc-----cccc------cc
Confidence 9999988762 3334578899999999999999999999999999997643211100000 0000 00
Q ss_pred CCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCC
Q 036585 161 KGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 240 (304)
Q Consensus 161 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 240 (304)
.....+..+..|...+.+++|+|++++|++++.||.|++||+++++.+..+. .+...+.+++|+|++++|+++ .|+
T Consensus 190 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~-~d~ 265 (372)
T 1k8k_C 190 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA---SETLPLLAVTFITESSLVAAG-HDC 265 (372)
T ss_dssp CTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE---CSSCCEEEEEEEETTEEEEEE-TTS
T ss_pred chhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc---cCCCCeEEEEEecCCCEEEEE-eCC
Confidence 0111233344678899999999999999999999999999999999999888 678899999999999999888 899
Q ss_pred cEEEEecCC--Cce--------------------------------e------eee-eccCCCCceEEeC-CCC---cEE
Q 036585 241 SVHAWSVRS--GKE--------------------------------V------ASW-MSFDTEPPVIKWA-PGS---LMF 275 (304)
Q Consensus 241 ~i~v~d~~~--~~~--------------------------------~------~~~-~~~~~~i~~~~~~-~~~---~~l 275 (304)
.|++|++.+ ++. . ..+ .+|..+|++++|+ +++ .+|
T Consensus 266 ~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l 345 (372)
T 1k8k_C 266 FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQF 345 (372)
T ss_dssp SCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEE
T ss_pred eEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeE
Confidence 999999987 420 0 223 4899999999976 666 999
Q ss_pred EEecCc--eEEeccCC
Q 036585 276 VTGSSE--LSFWIPDL 289 (304)
Q Consensus 276 ~s~~~d--~~iw~~~~ 289 (304)
++++.| +++|+++.
T Consensus 346 ~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 346 CTTGMDGGMSIWDVRS 361 (372)
T ss_dssp EEEETTSEEEEEEHHH
T ss_pred EEecCCCceEEEEecC
Confidence 999999 89998754
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.3e-38 Score=278.60 Aligned_cols=270 Identities=11% Similarity=0.104 Sum_probs=205.1
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCccee-----------eeecccccceeEEEEccC-CCeEEEEecCCCCCceE
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAATCL-----------KTINSKKYGVDLVCFTSH-PTTVIYSSKNGWDESLR 85 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~-----------~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~d~~i~ 85 (304)
...+.++|++++|++|+.||.|++||+++++.. ..+.+|..+|.+++|+|+ +..+++++. |+.|
T Consensus 101 V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~---dg~v- 176 (902)
T 2oaj_A 101 ITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE---YVTL- 176 (902)
T ss_dssp EEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS---SCEE-
T ss_pred EEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeC---CCcE-
Confidence 345788999999999999999999999987753 345678899999999996 467888887 9999
Q ss_pred EEEccCceeeeecccc------------------cccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEE-----
Q 036585 86 LLSLHDNKYSRYFKGH------------------HDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV----- 142 (304)
Q Consensus 86 vwd~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~----- 142 (304)
+||+++++.+..+..| ...|.+++|+|++++|++++.||.|++||+++++.+.....
T Consensus 177 lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~ 256 (902)
T 2oaj_A 177 TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEI 256 (902)
T ss_dssp EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCT
T ss_pred EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeeccccc
Confidence 9999999888777655 57899999999999999999999999999987654321000
Q ss_pred e---------------ccceeEe----cCC--------------------------------------------------
Q 036585 143 Q---------------GRPAAAY----DDQ-------------------------------------------------- 153 (304)
Q Consensus 143 ~---------------~~~~~~~----~~~-------------------------------------------------- 153 (304)
+ ....++| +++
T Consensus 257 ~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 336 (902)
T 2oaj_A 257 NVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKI 336 (902)
T ss_dssp TSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEE
T ss_pred CCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEE
Confidence 0 0001111 010
Q ss_pred -----------------------------CeEEEecCCCeEEEEecC----------------CCCCc------------
Q 036585 154 -----------------------------GLVFGYEKGPLDIFSVGG----------------DISDA------------ 176 (304)
Q Consensus 154 -----------------------------~~~~~~~~~~~~~~~~~~----------------~~~~v------------ 176 (304)
..+....++.+.+|++.. |...|
T Consensus 337 ~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~ 416 (902)
T 2oaj_A 337 FPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKL 416 (902)
T ss_dssp ECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHH
T ss_pred EecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHH
Confidence 011222335566665421 11223
Q ss_pred ----------------------eEEEEecCCcEEEEeeCCCeEEEEEcCCCcee--EEEEeC------CCCCCcceEEEE
Q 036585 177 ----------------------NVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL--STYNVK------PVSRNSTLEASF 226 (304)
Q Consensus 177 ----------------------~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~--~~~~~~------~~~~~~i~~~~~ 226 (304)
..++|+|++++|++|+.|++|++||+.++... ..+... ..|...|.+++|
T Consensus 417 w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svaf 496 (902)
T 2oaj_A 417 WLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISF 496 (902)
T ss_dssp HHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEE
T ss_pred HHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEe
Confidence 33456789999999999999999999887532 112110 157789999999
Q ss_pred cCCCcEEEEecCCCcEEEEecCCCc---------------------------------------------eeeeeeccCC
Q 036585 227 SPEGMFVISGSGDGSVHAWSVRSGK---------------------------------------------EVASWMSFDT 261 (304)
Q Consensus 227 s~~~~~l~~~~~dg~i~v~d~~~~~---------------------------------------------~~~~~~~~~~ 261 (304)
+||+++||+|+.||+|+|||+.+++ ++..+.+|.+
T Consensus 497 spdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~ 576 (902)
T 2oaj_A 497 AAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG 576 (902)
T ss_dssp ETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC
T ss_pred cCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCC
Confidence 9999999999999999999997652 3567788999
Q ss_pred CCceEEeCCCCcEEEEecCc--eEEeccCCccc
Q 036585 262 EPPVIKWAPGSLMFVTGSSE--LSFWIPDLSKL 292 (304)
Q Consensus 262 ~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~~ 292 (304)
+|++++|+||| +||+|+.| ++||+.+...+
T Consensus 577 ~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~ 608 (902)
T 2oaj_A 577 KTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAI 608 (902)
T ss_dssp SEEEEEECBTS-EEEEEETTSEEEEEETTTTEE
T ss_pred cEEEEEecCCc-EEEEEeCCCcEEEEECCCCeE
Confidence 99999999999 99999999 99999876543
No 77
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.8e-37 Score=250.20 Aligned_cols=225 Identities=18% Similarity=0.281 Sum_probs=197.0
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeec
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYF 98 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~ 98 (304)
..+.++|+|++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++.|++++. |+.|++||+.+++....+
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~---d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG---DRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC---CCcEEEEECCCCeeEEEE
Confidence 46889999999999999999999999999999999999999999999999999999998 999999999999887777
Q ss_pred ccccccEEEEEEcC-CCCEEEEcccCCeEEEEeCCcceeeceEEE-------e--ccceeEecCCCe--EEEecCCCeEE
Q 036585 99 KGHHDRVVLLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRV-------Q--GRPAAAYDDQGL--VFGYEKGPLDI 166 (304)
Q Consensus 99 ~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~--~~~~~~~~~~~~--~~~~~~~~~~~ 166 (304)
. +...+.+++|+| ++++|++++.|+.|++||++++.....+.. + ....+.+++++. +.+..++.+++
T Consensus 204 ~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 204 S-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL 282 (393)
T ss_dssp E-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred E-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 6 667899999999 899999999999999999998876655421 1 123567788774 44667888999
Q ss_pred EEec---------------------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEE
Q 036585 167 FSVG---------------------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS 225 (304)
Q Consensus 167 ~~~~---------------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~ 225 (304)
|++. +|...|.+++|+|++++|++++.||.|++||+++++.+..+. +|...|.+++
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~---~h~~~v~~v~ 359 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ---GHRNSVISVA 359 (393)
T ss_dssp EEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEE
T ss_pred EECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEEC---CCCCCEEEEE
Confidence 8764 467789999999999999999999999999999999998888 7899999999
Q ss_pred EcC------CCcEEEEecCCCcEEEEecCCC
Q 036585 226 FSP------EGMFVISGSGDGSVHAWSVRSG 250 (304)
Q Consensus 226 ~s~------~~~~l~~~~~dg~i~v~d~~~~ 250 (304)
|++ ++++|++|+.||.|++|+++..
T Consensus 360 ~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 360 VANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp ECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred ecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 886 6899999999999999998643
No 78
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.7e-37 Score=250.94 Aligned_cols=278 Identities=15% Similarity=0.205 Sum_probs=223.3
Q ss_pred eeeeeccee---eEeecc-cCcEEEEeeCCCeEEEEecCCcceeeeec-------------ccccceeEEEEcc-CCCeE
Q 036585 11 KVSLELSEE---ILQSME-VGIYLVTASDDESIRLYDVTAATCLKTIN-------------SKKYGVDLVCFTS-HPTTV 72 (304)
Q Consensus 11 ~~~~~~~~~---~i~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~~l 72 (304)
...+.+|.. .+.++| ++++|++++.||.|++||+.+++....+. +|...|.+++|+| ++..+
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 334444544 467889 99999999999999999999877655543 5889999999999 77799
Q ss_pred EEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCC---CCEEEEcccCCeEEEEeCCcceeeceEEEecc--ce
Q 036585 73 IYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSS---KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PA 147 (304)
Q Consensus 73 ~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~ 147 (304)
++++. |+.|++||+.+++....+. +...+.++.|+|. +.++++++.|+.|++||+++++....+..+.. ..
T Consensus 116 ~s~~~---d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~ 191 (408)
T 4a11_B 116 TSSSF---DKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILA 191 (408)
T ss_dssp EEEET---TSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEE
T ss_pred EEEeC---CCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEE
Confidence 99998 9999999999998888776 7788999999984 44999999999999999998887776654433 35
Q ss_pred eEecCCC---eEEEecCCCeEEEEe-------------------------cCCCCCceEEEEecCCcEEEEeeCCCeEEE
Q 036585 148 AAYDDQG---LVFGYEKGPLDIFSV-------------------------GGDISDANVVKFSNDGRLMLLTTMEGHIHV 199 (304)
Q Consensus 148 ~~~~~~~---~~~~~~~~~~~~~~~-------------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 199 (304)
+.+++++ .+.+..++.+.+|++ ..|...|.+++|+|++++|++++.||.|++
T Consensus 192 ~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 271 (408)
T 4a11_B 192 VSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRL 271 (408)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEE
Confidence 6778776 345778899999988 457788999999999999999999999999
Q ss_pred EEcCCCceeEEEEeCC--CCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEE
Q 036585 200 LDSFRGTLLSTYNVKP--VSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVT 277 (304)
Q Consensus 200 ~d~~~~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s 277 (304)
||+++++......... .....+........+..+++++.++.|++||+.+++++..+.+|...|++++|+|++++|++
T Consensus 272 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 351 (408)
T 4a11_B 272 WNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYS 351 (408)
T ss_dssp EETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEE
T ss_pred EECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEE
Confidence 9999887655443110 11122222222334556667778999999999999999999999999999999999999999
Q ss_pred ecCc--eEEeccCCccc
Q 036585 278 GSSE--LSFWIPDLSKL 292 (304)
Q Consensus 278 ~~~d--~~iw~~~~~~~ 292 (304)
++.| +++|+++..+.
T Consensus 352 ~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 352 GSRDCNILAWVPSLYEP 368 (408)
T ss_dssp EETTSCEEEEEECC---
T ss_pred ECCCCeEEEEeCCCCCc
Confidence 9998 99999876543
No 79
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-38 Score=252.33 Aligned_cols=229 Identities=13% Similarity=0.111 Sum_probs=185.5
Q ss_pred eecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEcc---------Cc
Q 036585 22 QSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH---------DN 92 (304)
Q Consensus 22 ~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~---------~~ 92 (304)
.+..++++|++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++. |+.|++|+.. ++
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~---D~~i~~w~~~~~~~~~~~~~~ 114 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGP---CNRLLLLYPGNQITILDSKTN 114 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECS---TTEEEEEETTTEEEEEETTTC
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecC---CCeEEEEEccCceEEeecCCc
Confidence 344678999999999999999999999888876 457888899888 888888 9999999765 34
Q ss_pred eeeeecc-cccccEEEEEEcC--CCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEe
Q 036585 93 KYSRYFK-GHHDRVVLLSLCS--SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSV 169 (304)
Q Consensus 93 ~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
+.+..+. +|.++|.+++|+| +++++++++.||.|++||+++++......
T Consensus 115 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~---------------------------- 166 (343)
T 3lrv_A 115 KVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS---------------------------- 166 (343)
T ss_dssp CEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC----------------------------
T ss_pred ceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe----------------------------
Confidence 4333333 5668999999999 99999999999999999999887643321
Q ss_pred cCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCcee-EEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecC
Q 036585 170 GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL-STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVR 248 (304)
Q Consensus 170 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~ 248 (304)
..+...+.+++|+|++.+|++|+.||.|++||+++++.. ..+.. .|..+|++++|+|++.+|++++ |+.|++||++
T Consensus 167 ~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~--~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~ 243 (343)
T 3lrv_A 167 AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV--DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLR 243 (343)
T ss_dssp CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC--CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETT
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec--cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcC
Confidence 124457999999999999999999999999999999877 66652 2889999999999999999999 5599999999
Q ss_pred CCceeeeeec---cCCCCc--eEEeCCCCcEEEEecC-c--eEEeccCC
Q 036585 249 SGKEVASWMS---FDTEPP--VIKWAPGSLMFVTGSS-E--LSFWIPDL 289 (304)
Q Consensus 249 ~~~~~~~~~~---~~~~i~--~~~~~~~~~~l~s~~~-d--~~iw~~~~ 289 (304)
+++.+..+.. |...+. +++|+|++++|++++. | ++||+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 244 KDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp SSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcc
Confidence 9877655543 445555 5999999999999765 5 99998854
No 80
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.2e-37 Score=250.82 Aligned_cols=239 Identities=16% Similarity=0.235 Sum_probs=203.7
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeecc-cccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccccccc
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDR 104 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~ 104 (304)
++..+++++.|+.|++||+.+++....+.. |...|.+++|+|++++|++++. ||.|++||+.+++.+..+.+|...
T Consensus 102 s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~ 178 (401)
T 4aez_A 102 SNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG---NGLVDIYDVESQTKLRTMAGHQAR 178 (401)
T ss_dssp CTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET---TSCEEEEETTTCCEEEEECCCSSC
T ss_pred cCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC---CCeEEEEECcCCeEEEEecCCCCc
Confidence 456788899999999999999998877776 7889999999999999999998 999999999999999999999999
Q ss_pred EEEEEEcCCCCEEEEcccCCeEEEEeCCcce-eeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEec
Q 036585 105 VVLLSLCSSKDCFISGSLDRTVLLWDQRAEK-CQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSN 183 (304)
Q Consensus 105 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 183 (304)
|.+++| +++++++++.||.|++||++... ....+ .+|...|.+++|+|
T Consensus 179 v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-----------------------------~~~~~~v~~~~~~~ 227 (401)
T 4aez_A 179 VGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTL-----------------------------QGHSSEVCGLAWRS 227 (401)
T ss_dssp EEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEE-----------------------------ECCSSCEEEEEECT
T ss_pred eEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEE-----------------------------cCCCCCeeEEEEcC
Confidence 999999 46799999999999999998433 22222 36778999999999
Q ss_pred CCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCC-cEEEEec--CCCcEEEEecCCCceeeeeeccC
Q 036585 184 DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG-MFVISGS--GDGSVHAWSVRSGKEVASWMSFD 260 (304)
Q Consensus 184 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~--~dg~i~v~d~~~~~~~~~~~~~~ 260 (304)
++++|++++.||.|++||+++++....+. .|...+.+++|+|++ .++++++ .|+.|++||+.+++++..+. +.
T Consensus 228 ~~~~l~s~~~d~~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~ 303 (401)
T 4aez_A 228 DGLQLASGGNDNVVQIWDARSSIPKFTKT---NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AG 303 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTCSSEEEEEC---CCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CS
T ss_pred CCCEEEEEeCCCeEEEccCCCCCccEEec---CCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CC
Confidence 99999999999999999999998888876 688999999999976 4566654 79999999999999988885 67
Q ss_pred CCCceEEeCCCCcEEEEec--Cc--eEEeccCCccc---cccccCCCCC
Q 036585 261 TEPPVIKWAPGSLMFVTGS--SE--LSFWIPDLSKL---GAYVGRNRGC 302 (304)
Q Consensus 261 ~~i~~~~~~~~~~~l~s~~--~d--~~iw~~~~~~~---~~~~~~~~g~ 302 (304)
..|.+++|+|+++++++++ .| +++|++..... ..+.+|...+
T Consensus 304 ~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v 352 (401)
T 4aez_A 304 SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRV 352 (401)
T ss_dssp SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCC
T ss_pred CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCE
Confidence 7899999999999999843 56 99999866433 2344555443
No 81
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4e-37 Score=241.81 Aligned_cols=207 Identities=15% Similarity=0.257 Sum_probs=177.5
Q ss_pred eeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC--ceeeeecccccccEEEEEEcC--CCCEEEEcccCCe
Q 036585 50 LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD--NKYSRYFKGHHDRVVLLSLCS--SKDCFISGSLDRT 125 (304)
Q Consensus 50 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~ 125 (304)
+..+.+|...|.+++|+|++++|++++. |++|++||+.+ .+.+..+.+|.++|.+++|+| ++++|++++.|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~---D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSS---DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEET---TSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeC---CCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 3457789999999999999999999998 99999999975 367788999999999999986 3889999999999
Q ss_pred EEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecC--CcEEEEeeCCCeEEEEEcC
Q 036585 126 VLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSND--GRLMLLTTMEGHIHVLDSF 203 (304)
Q Consensus 126 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~~ 203 (304)
|++||+++++...... +..|...|.+++|+|+ +.+|++++.||.|++||++
T Consensus 79 v~iWd~~~~~~~~~~~---------------------------~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~ 131 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAV---------------------------HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFK 131 (297)
T ss_dssp EEEEEBSSSCBCCCEE---------------------------ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBC
T ss_pred EEEEEcCCCceEEEEE---------------------------eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEec
Confidence 9999998764322211 2357788999999997 8899999999999999998
Q ss_pred CCce--eEEEEeCCCCCCcceEEEEcCC-------------CcEEEEecCCCcEEEEecCCCc----eeeeeeccCCCCc
Q 036585 204 RGTL--LSTYNVKPVSRNSTLEASFSPE-------------GMFVISGSGDGSVHAWSVRSGK----EVASWMSFDTEPP 264 (304)
Q Consensus 204 ~~~~--~~~~~~~~~~~~~i~~~~~s~~-------------~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~i~ 264 (304)
++.. ...+. .|...+.+++|+|+ +++|++|+.|+.|++||+++++ ....+.+|...|.
T Consensus 132 ~~~~~~~~~~~---~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~ 208 (297)
T 2pm7_B 132 ENGTTSPIIID---AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (297)
T ss_dssp SSSCBCCEEEE---CCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred CCCceeeeeee---cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceE
Confidence 7642 23444 68889999999997 5799999999999999998766 5667889999999
Q ss_pred eEEeCCCC---cEEEEecCc--eEEeccCC
Q 036585 265 VIKWAPGS---LMFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 265 ~~~~~~~~---~~l~s~~~d--~~iw~~~~ 289 (304)
+++|+|++ .+|++++.| ++||+++.
T Consensus 209 ~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 209 DVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 99999984 899999999 99999865
No 82
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.7e-36 Score=250.36 Aligned_cols=270 Identities=19% Similarity=0.284 Sum_probs=226.7
Q ss_pred ceeeeecceeeEeec-ccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEE
Q 036585 10 DKVSLELSEEILQSM-EVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLS 88 (304)
Q Consensus 10 ~~~~~~~~~~~i~~~-~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd 88 (304)
....+.+|...+... .+++++++++.||.|++||+.+++.+..+.+|...|.+++|+ ++.+++++. |+.|++||
T Consensus 151 ~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~---dg~i~~wd 225 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSR---DATLRVWD 225 (445)
T ss_dssp EEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEET---TSEEEEEE
T ss_pred EEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeC---CCEEEEEE
Confidence 344555666554433 347899999999999999999999999999999999999994 678999998 99999999
Q ss_pred ccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccc--eeEecCCCeEEEecCCCeEE
Q 036585 89 LHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQGLVFGYEKGPLDI 166 (304)
Q Consensus 89 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 166 (304)
+.+++.+..+.+|...|.++.| +++++++++.||.|++||+++++....+..+... .+.++....+.+..++.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i 303 (445)
T 2ovr_B 226 IETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRV 303 (445)
T ss_dssp SSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEE
T ss_pred CCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEE
Confidence 9999999999999999999999 6789999999999999999998887776544433 34455555666778888888
Q ss_pred EEec---------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec
Q 036585 167 FSVG---------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 237 (304)
Q Consensus 167 ~~~~---------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 237 (304)
|++. +|...+.++.+ +++++++++.||.|++||+++++.+..+.....+...|++++|+ +++|++|+
T Consensus 304 ~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~ 379 (445)
T 2ovr_B 304 WDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSS 379 (445)
T ss_dssp EETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEE
T ss_pred EECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEe
Confidence 8764 45566666665 57799999999999999999999998888555588899999995 57999999
Q ss_pred CCCcEEEEecCCCceeeee-----eccCCCCceEEeCCCCcEEEEecCc------eEEeccCCc
Q 036585 238 GDGSVHAWSVRSGKEVASW-----MSFDTEPPVIKWAPGSLMFVTGSSE------LSFWIPDLS 290 (304)
Q Consensus 238 ~dg~i~v~d~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l~s~~~d------~~iw~~~~~ 290 (304)
.||.|++||+.+++.+..+ ..|.+.|++++|+|++.++++++.| +.+|+++.+
T Consensus 380 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 380 DDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp TTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred CCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 9999999999999988887 4788899999999999999999877 557777653
No 83
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.8e-37 Score=285.40 Aligned_cols=276 Identities=14% Similarity=0.182 Sum_probs=231.5
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC-------
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD------- 91 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~------- 91 (304)
..+.++|+++++++++.||.|++||+.+++.+..+.+|...|.+++|+|+++.+++++. |+.|++|++.+
T Consensus 844 ~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~---dg~v~vw~~~~~~~~~~~ 920 (1249)
T 3sfz_A 844 QYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASD---DQTIRVWETKKVCKNSAI 920 (1249)
T ss_dssp CEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSCEEEEEHHHHHSCCSS
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeC---CCeEEEEEccccceeeee
Confidence 35778899999999999999999999999999999999999999999999999999988 88888887542
Q ss_pred ------------------------------------------------------------------------ceeeeecc
Q 036585 92 ------------------------------------------------------------------------NKYSRYFK 99 (304)
Q Consensus 92 ------------------------------------------------------------------------~~~~~~~~ 99 (304)
++....+.
T Consensus 921 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~ 1000 (1249)
T 3sfz_A 921 VLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGV 1000 (1249)
T ss_dssp SEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECC
T ss_pred cccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecc
Confidence 22334456
Q ss_pred cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEec-cceeEecCCCe-EEEecCCCeEEEEec-------
Q 036585 100 GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGL-VFGYEKGPLDIFSVG------- 170 (304)
Q Consensus 100 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~------- 170 (304)
+|...|.+++|+|+++++++++.||.|++||+.+++......... ...+.+.+++. +.+..++.+.+|++.
T Consensus 1001 ~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 1080 (1249)
T 3sfz_A 1001 GHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERD 1080 (1249)
T ss_dssp CCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEE
Confidence 788999999999999999999999999999999887765432222 22455666664 446667888888764
Q ss_pred --CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecC
Q 036585 171 --GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVR 248 (304)
Q Consensus 171 --~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~ 248 (304)
+|...|.+++|+|+++++++++.||.|++||+.+++....+. .|...|++++|+|++++|++++.||.|++||+.
T Consensus 1081 ~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~---~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~ 1157 (1249)
T 3sfz_A 1081 FTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHELK---GHNGCVRCSAFSLDGILLATGDDNGEIRIWNVS 1157 (1249)
T ss_dssp EECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCCC---CCSSCEEEEEECSSSSEEEEEETTSCCCEEESS
T ss_pred EcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeeec---cCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 478889999999999999999999999999999998887776 688999999999999999999999999999999
Q ss_pred CCceeeee---------eccCCCCceEEeCCCCcEEEEecCceEEeccCCcc-ccccccCCC
Q 036585 249 SGKEVASW---------MSFDTEPPVIKWAPGSLMFVTGSSELSFWIPDLSK-LGAYVGRNR 300 (304)
Q Consensus 249 ~~~~~~~~---------~~~~~~i~~~~~~~~~~~l~s~~~d~~iw~~~~~~-~~~~~~~~~ 300 (304)
+++.+..+ ..|.+.|++++|+|++++|++++..+++|+++..+ +..+.+|..
T Consensus 1158 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~g~v~vwd~~~g~~~~~~~~~~~ 1219 (1249)
T 3sfz_A 1158 DGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAGGYLKWWNVATGDSSQTFYTNGT 1219 (1249)
T ss_dssp SSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEESSSEEEBCSSSCBCCCCCCCSSC
T ss_pred CCceEEEeccccccccccccCceEEEEEECCCCCEEEECCCeEEEEECCCCceeeeeeccCC
Confidence 98877665 67899999999999999999998669999986543 455555544
No 84
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=250.82 Aligned_cols=244 Identities=17% Similarity=0.273 Sum_probs=192.1
Q ss_pred eeEeecccC--cEEEEeeCCCeEEEEecCCccee---------------------------------------ee-eccc
Q 036585 19 EILQSMEVG--IYLVTASDDESIRLYDVTAATCL---------------------------------------KT-INSK 56 (304)
Q Consensus 19 ~~i~~~~~~--~~l~~~~~d~~i~vw~~~~~~~~---------------------------------------~~-~~~~ 56 (304)
..+.+++++ .+|++++.|+.|++||+.+++.. .. ..+|
T Consensus 97 ~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 176 (447)
T 3dw8_B 97 NKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAH 176 (447)
T ss_dssp CEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCC
T ss_pred EEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCC
Confidence 347889988 79999999999999998764432 12 3679
Q ss_pred ccceeEEEEccCCCeEEEEecCCCCCceEEEEccC-ceeee-------ecccccccEEEEEEcCCC-CEEEEcccCCeEE
Q 036585 57 KYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYSR-------YFKGHHDRVVLLSLCSSK-DCFISGSLDRTVL 127 (304)
Q Consensus 57 ~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~ 127 (304)
...|.+++|+|+++.|+++ . |+.|++||+.+ ++... .+.+|...|.+++|+|++ ++|++++.||.|+
T Consensus 177 ~~~v~~~~~~~~~~~l~s~-~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 177 TYHINSISINSDYETYLSA-D---DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SSCCCEEEECTTSSEEEEE-C---SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred CcceEEEEEcCCCCEEEEe-C---CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 9999999999999999998 6 99999999984 44443 366899999999999998 8999999999999
Q ss_pred EEeCCccee----eceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcC
Q 036585 128 LWDQRAEKC----QGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 203 (304)
Q Consensus 128 iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~ 203 (304)
+||+++++. ...+..+..+. ....+..|...|.+++|+|++++|++++. +.|++||++
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~ 314 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPS-----------------NRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLN 314 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC----------------------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETT
T ss_pred EEECcCCccccceeeEeccCCCcc-----------------ccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCC
Confidence 999998775 22222110000 00000112348999999999999999999 999999999
Q ss_pred C-CceeEEEEeCCCCCCc---------------ceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeee----------
Q 036585 204 R-GTLLSTYNVKPVSRNS---------------TLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWM---------- 257 (304)
Q Consensus 204 ~-~~~~~~~~~~~~~~~~---------------i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~---------- 257 (304)
+ ++.+..+. .|... +..++|+|++++|++|+.||.|++||+.+++.+. +.
T Consensus 315 ~~~~~~~~~~---~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~ 390 (447)
T 3dw8_B 315 MENRPVETYQ---VHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRT 390 (447)
T ss_dssp CCSSCSCCEE---SCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTC
T ss_pred CCccccceee---ccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeeccccccccc
Confidence 7 88888887 34321 3348999999999999999999999999887642 21
Q ss_pred -----------------------ccCCCCceEEeCCCCcEEEEecCc-eEEeccC
Q 036585 258 -----------------------SFDTEPPVIKWAPGSLMFVTGSSE-LSFWIPD 288 (304)
Q Consensus 258 -----------------------~~~~~i~~~~~~~~~~~l~s~~~d-~~iw~~~ 288 (304)
.+...|..++|+|++.+||+++.+ +.+|.-.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~~~~~~ 445 (447)
T 3dw8_B 391 VLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLYIFQDK 445 (447)
T ss_dssp BCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEEEEECC
T ss_pred ccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceeeeeccc
Confidence 234578899999999999999999 8888654
No 85
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-36 Score=241.97 Aligned_cols=214 Identities=15% Similarity=0.218 Sum_probs=173.5
Q ss_pred CcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCc--eeeeec-cc-ccccEEEEEEcCCCCEEEEcc
Q 036585 46 AATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN--KYSRYF-KG-HHDRVVLLSLCSSKDCFISGS 121 (304)
Q Consensus 46 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~~~~ 121 (304)
+.+++..+.+|..+|.+++|+|+ +|++++. |+.|++||+..+ +....+ .+ |...|.+++|+|++++|++++
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~---D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s 77 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGST---DRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS 77 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEES---SSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcC---CCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe
Confidence 45677889999999999999987 8999998 999999999875 344445 34 999999999999999999999
Q ss_pred cCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEE
Q 036585 122 LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLD 201 (304)
Q Consensus 122 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d 201 (304)
.|++|++||++....... ....+..+.+|...|.+++|+|++++|++++.|++|++||
T Consensus 78 ~D~~v~iw~~~~~~~~~~----------------------~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 78 FDSTVSIWAKEESADRTF----------------------EMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp TTSCEEEEEC-------C----------------------CCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CCCcEEEEEcccCcCccc----------------------cceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 999999999864321000 0011233457889999999999999999999999999999
Q ss_pred cCCC----ceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCC--ceeeeeeccCCCCceEEeCCC--Cc
Q 036585 202 SFRG----TLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSG--KEVASWMSFDTEPPVIKWAPG--SL 273 (304)
Q Consensus 202 ~~~~----~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~--~~ 273 (304)
++.. +.+..+. .|...|.+++|+|++++|++++.|+.|++||..++ +++..+.+|...|.+++|+|+ +.
T Consensus 136 ~~~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 212 (330)
T 2hes_X 136 TDESGEEYECISVLQ---EHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVF 212 (330)
T ss_dssp CCTTCCCCEEEEEEC---CCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSC
T ss_pred ccCCCCCeEEEEEec---cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCee
Confidence 9532 3344444 68899999999999999999999999999999776 577888999999999999998 67
Q ss_pred EEEEecCc--eEEeccCC
Q 036585 274 MFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 274 ~l~s~~~d--~~iw~~~~ 289 (304)
+|++++.| +++|++..
T Consensus 213 ~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 213 RLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEEETTSCEEEEEEEE
T ss_pred EEEEEeCCCeEEEEEecC
Confidence 89999999 99998854
No 86
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-36 Score=249.95 Aligned_cols=241 Identities=12% Similarity=0.123 Sum_probs=201.3
Q ss_pred eecceeeEeecccCcEEEEeeCCCeEEEEecCCcc---eeeeeccc----------------------------------
Q 036585 14 LELSEEILQSMEVGIYLVTASDDESIRLYDVTAAT---CLKTINSK---------------------------------- 56 (304)
Q Consensus 14 ~~~~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~---~~~~~~~~---------------------------------- 56 (304)
+.+....+.++++|++|+++ .++.|++||+.+++ .+..+..+
T Consensus 3 ~~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 3 VIHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp EECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred ccccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 44556678899999976666 57799999999988 65555432
Q ss_pred --------------------ccceeEEEEccCCCeE-EEEecCCCCCceEEEEcc--Cceeeeecc--cccccEEEEEEc
Q 036585 57 --------------------KYGVDLVCFTSHPTTV-IYSSKNGWDESLRLLSLH--DNKYSRYFK--GHHDRVVLLSLC 111 (304)
Q Consensus 57 --------------------~~~v~~~~~~~~~~~l-~~~~~~~~d~~i~vwd~~--~~~~~~~~~--~~~~~v~~~~~~ 111 (304)
...|.+++|+|++++| ++++. |+.|++||+. +++.+..+. .|...|.+++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~---dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 158 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADS---DKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIA 158 (450)
T ss_dssp ------------------CCCCCEEEEEECTTSSEEEEEEGG---GTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEEC
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECC---CCeEEEEECcCCCCceeeeeecccCCCCceEEEEc
Confidence 2369999999999996 77777 9999999999 888887776 466899999999
Q ss_pred CCCCEEEEcccCCeEEEEeCCcceeec-eEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecC---CcE
Q 036585 112 SSKDCFISGSLDRTVLLWDQRAEKCQG-LLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSND---GRL 187 (304)
Q Consensus 112 ~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~ 187 (304)
|++++|++++.+|.+++|++.+..... ... .+.+|...|.+++|+|+ +++
T Consensus 159 p~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~--------------------------~~~~h~~~v~~~~~sp~~~~~~~ 212 (450)
T 2vdu_B 159 EDDTTVIIADKFGDVYSIDINSIPEEKFTQE--------------------------PILGHVSMLTDVHLIKDSDGHQF 212 (450)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCCCSSCCCC--------------------------CSEECSSCEEEEEEEECTTSCEE
T ss_pred CCCCEEEEEeCCCcEEEEecCCcccccccce--------------------------eeecccCceEEEEEcCCCCCCcE
Confidence 999999999999999999998776543 000 11246788999999999 999
Q ss_pred EEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeec---------
Q 036585 188 MLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMS--------- 258 (304)
Q Consensus 188 l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--------- 258 (304)
|++++.|+.|++||+++++.+..+.. +|...|.+++|+ ++++|++++.|+.|++||+++++++..+..
T Consensus 213 l~s~~~d~~i~vwd~~~~~~~~~~~~--~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~ 289 (450)
T 2vdu_B 213 IITSDRDEHIKISHYPQCFIVDKWLF--GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLN 289 (450)
T ss_dssp EEEEETTSCEEEEEESCTTCEEEECC--CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCC
T ss_pred EEEEcCCCcEEEEECCCCceeeeeec--CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhh
Confidence 99999999999999999887766432 588999999999 999999999999999999999998877753
Q ss_pred ----------------cCCCCceEEeCCCCcEEEEec-Cc--eEEecc
Q 036585 259 ----------------FDTEPPVIKWAPGSLMFVTGS-SE--LSFWIP 287 (304)
Q Consensus 259 ----------------~~~~i~~~~~~~~~~~l~s~~-~d--~~iw~~ 287 (304)
....|.+++|+|++++|++++ .+ +++|++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 290 DQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp TTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred hcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 235688999999999999988 55 999998
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.7e-36 Score=259.11 Aligned_cols=241 Identities=13% Similarity=0.138 Sum_probs=212.6
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCc----ceeeeecccccc-eeEEEEcc--CCCeEEEEecCCCCCceEEEEc
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAA----TCLKTINSKKYG-VDLVCFTS--HPTTVIYSSKNGWDESLRLLSL 89 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~----~~~~~~~~~~~~-v~~~~~~~--~~~~l~~~~~~~~d~~i~vwd~ 89 (304)
....+.++|+|++|++++ ++.|++||+.++ +....+.+|... |.+++|+| ++++|++++. |+.|++||+
T Consensus 20 ~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~---dg~v~vw~~ 95 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDE---SGKVIVWGW 95 (615)
T ss_dssp CCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEET---TSEEEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecC---CCEEEEEeC
Confidence 345688999999999998 789999999998 889999999999 99999999 9999999998 999999999
Q ss_pred cCc--------eeeeecccccccEEEEEEcCCCCEEEEcccC----CeEEEEeCCcceeeceEEEeccceeEecCCCeEE
Q 036585 90 HDN--------KYSRYFKGHHDRVVLLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVF 157 (304)
Q Consensus 90 ~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (304)
.++ +....+..|..+|.+++|+|++++|++++.+ +.|++||. ++...
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~--~~~~~------------------- 154 (615)
T 1pgu_A 96 TFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS--GNSLG------------------- 154 (615)
T ss_dssp EEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT--CCEEE-------------------
T ss_pred CCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC--CCcce-------------------
Confidence 754 6677788899999999999999999999987 78999983 33222
Q ss_pred EecCCCeEEEEecCCCCCceEEEEecCCc-EEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCC---cceEEEEcCC-CcE
Q 036585 158 GYEKGPLDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN---STLEASFSPE-GMF 232 (304)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~---~i~~~~~s~~-~~~ 232 (304)
.+.+|...|.+++|+|+++ .+++++.||.|++||+.+++....+. .|.. .+.+++|+|+ +++
T Consensus 155 ----------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~ 221 (615)
T 1pgu_A 155 ----------EVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR---THHKQGSFVRDVEFSPDSGEF 221 (615)
T ss_dssp ----------ECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC---SSSCTTCCEEEEEECSTTCCE
T ss_pred ----------eeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec---ccCCCCceEEEEEECCCCCCE
Confidence 2236788999999999998 79999999999999999999888887 5777 8999999999 999
Q ss_pred EEEecCCCcEEEEecCCCceeeee-e---ccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc-ccccc
Q 036585 233 VISGSGDGSVHAWSVRSGKEVASW-M---SFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK-LGAYV 296 (304)
Q Consensus 233 l~~~~~dg~i~v~d~~~~~~~~~~-~---~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~-~~~~~ 296 (304)
|++++.||.|++||+++++.+..+ . .|..+|.+++|+ ++++|++++.| +++|++...+ +..+.
T Consensus 222 l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 222 VITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp EEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 999999999999999999999888 6 899999999999 99999999988 9999987543 33343
No 88
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-35 Score=237.77 Aligned_cols=226 Identities=16% Similarity=0.263 Sum_probs=198.9
Q ss_pred eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEE
Q 036585 49 CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLL 128 (304)
Q Consensus 49 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 128 (304)
....+.+|...|.+++|+|++++|++++. |+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~i 100 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSK---DSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKL 100 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEES---SSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeC---CCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 34568899999999999999999999998 999999999999999999999999999999999999999999999999
Q ss_pred EeCCcceeeceEEEecc-ceeEecCCCeEE--EecC-----CCeEEEEecCCC--------------------C--CceE
Q 036585 129 WDQRAEKCQGLLRVQGR-PAAAYDDQGLVF--GYEK-----GPLDIFSVGGDI--------------------S--DANV 178 (304)
Q Consensus 129 wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~--------------------~--~v~~ 178 (304)
||+++++....+..... ..+.+++++..+ +..+ +.+.+|++.... . .+.+
T Consensus 101 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 101 WDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred EECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 99999988877763322 356778877443 4444 788888876432 1 8999
Q ss_pred EEEecCCcEEEEeeCCCeEEEEEcCC-CceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeee
Q 036585 179 VKFSNDGRLMLLTTMEGHIHVLDSFR-GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWM 257 (304)
Q Consensus 179 ~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 257 (304)
++|+|++++|++++.||.|++||+++ ++....+. .+...+.+++|+|++++|++++.|+.|++||+++++.+..+.
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID---LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE---CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe---cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 99999999999999999999999998 67777777 688999999999999999999999999999999999888887
Q ss_pred ccCCCCceEEeCCCCcEEEEecCc
Q 036585 258 SFDTEPPVIKWAPGSLMFVTGSSE 281 (304)
Q Consensus 258 ~~~~~i~~~~~~~~~~~l~s~~~d 281 (304)
+...+.+++|+|+++++++++.+
T Consensus 258 -~~~~~~~~~~~~~~~~l~~~~~~ 280 (369)
T 3zwl_B 258 -TDCPLNTAVITPLKEFIILGGGQ 280 (369)
T ss_dssp -CSSCEEEEEECSSSSEEEEEECC
T ss_pred -CCCCceeEEecCCCceEEEeecC
Confidence 78899999999999999998764
No 89
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.2e-37 Score=251.44 Aligned_cols=258 Identities=10% Similarity=0.109 Sum_probs=189.6
Q ss_pred eeeeecce---eeEeecccCcEEEEeeCCCeEEEEecCCcc---eeeeecccccceeEEEEccCCCeEEEEecCCCCCce
Q 036585 11 KVSLELSE---EILQSMEVGIYLVTASDDESIRLYDVTAAT---CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESL 84 (304)
Q Consensus 11 ~~~~~~~~---~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 84 (304)
...+..|. ..+.+++++++|++++.|+.|++||+.+++ ....+..|...|.+++|+|+++.|++++. |+.|
T Consensus 48 ~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i 124 (377)
T 3dwl_C 48 ARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG---ARVI 124 (377)
T ss_dssp CCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES---SSCE
T ss_pred EEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEec---CCeE
Confidence 33444554 346788999999999999999999999877 67778889999999999999999999998 9999
Q ss_pred EEEEccCce---eeeeccc-ccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEec
Q 036585 85 RLLSLHDNK---YSRYFKG-HHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYE 160 (304)
Q Consensus 85 ~vwd~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (304)
++||+.+++ ....+.. |...|.+++|+|++++|++++.|+.|++||++........... .+....
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~------ 193 (377)
T 3dwl_C 125 SVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEAS-----VWGSRL------ 193 (377)
T ss_dssp EECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSC-----SSCSCC------
T ss_pred EEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCcccc-----cccccc------
Confidence 999999887 3667777 9999999999999999999999999999998754322110000 000000
Q ss_pred CCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCce----eEEEEeCCCCCCcceEEEEcCCCcEEEEe
Q 036585 161 KGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL----LSTYNVKPVSRNSTLEASFSPEGMFVISG 236 (304)
Q Consensus 161 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 236 (304)
.....+..+ .|...|.+++|+|++++|++++.||.|++||+++++. +..+. .|...+.+++|+|++++|+++
T Consensus 194 ~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 194 PFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK---LSQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp CEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE---CSSSCEEEEEEEETTEEEEEE
T ss_pred chhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec---CCCCceEEEEEcCCCCEEEEE
Confidence 000012222 6888999999999999999999999999999999887 66666 688899999999999999999
Q ss_pred cCCCcEEEEecCCCc--ee----------------------------------eee----------------eccCCCCc
Q 036585 237 SGDGSVHAWSVRSGK--EV----------------------------------ASW----------------MSFDTEPP 264 (304)
Q Consensus 237 ~~dg~i~v~d~~~~~--~~----------------------------------~~~----------------~~~~~~i~ 264 (304)
+.++.+ +|+..... .. ..+ ..|...|+
T Consensus 270 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~ 348 (377)
T 3dwl_C 270 YNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIA 348 (377)
T ss_dssp SSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEE
T ss_pred cCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeE
Confidence 866655 77664211 00 001 12889999
Q ss_pred eEEeCCCC-c---EEEEecCc--eEEecc
Q 036585 265 VIKWAPGS-L---MFVTGSSE--LSFWIP 287 (304)
Q Consensus 265 ~~~~~~~~-~---~l~s~~~d--~~iw~~ 287 (304)
++++.+.. . .|+|++.| ++||++
T Consensus 349 ~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 349 TLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred EEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 99976644 2 69999999 999974
No 90
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=3.2e-35 Score=235.36 Aligned_cols=241 Identities=17% Similarity=0.283 Sum_probs=199.0
Q ss_pred cCCcceeeeecccccceeEEEEccC-CCeEEEEecCCCCCceEEEEccCce-----eeeecccccccEEEEEEcCCCCEE
Q 036585 44 VTAATCLKTINSKKYGVDLVCFTSH-PTTVIYSSKNGWDESLRLLSLHDNK-----YSRYFKGHHDRVVLLSLCSSKDCF 117 (304)
Q Consensus 44 ~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~d~~i~vwd~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l 117 (304)
.++.++..+|++|.+.|++++|+|+ +++|++++. |++|++||+.+.+ +...+.+|...|.+++|+|++++|
T Consensus 25 ~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~---D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l 101 (340)
T 4aow_A 25 TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASR---DKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFA 101 (340)
T ss_dssp -CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEET---TSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcC---CCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEE
Confidence 3445567789999999999999998 578999998 9999999997653 466788999999999999999999
Q ss_pred EEcccCCeEEEEeCCcceeeceEEEeccc--eeEecCCC--eEEEecCCCeEEEEe----------cCCCCCceEEEEec
Q 036585 118 ISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQG--LVFGYEKGPLDIFSV----------GGDISDANVVKFSN 183 (304)
Q Consensus 118 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~----------~~~~~~v~~~~~~~ 183 (304)
++++.|+.|++|+................ ...+.+++ .+.+..++.+.+|+. .+|...+..++|++
T Consensus 102 ~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 181 (340)
T 4aow_A 102 LSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 181 (340)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECS
T ss_pred EEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEcc
Confidence 99999999999999888776655543332 23334433 444566777777764 34678899999988
Q ss_pred CC--cEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCC
Q 036585 184 DG--RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDT 261 (304)
Q Consensus 184 ~~--~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~ 261 (304)
++ .++++++.|+.|++||+++++....+. .|...|++++|+|++++|++|+.|+.|++||+++.+++..+.. ..
T Consensus 182 ~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~ 257 (340)
T 4aow_A 182 NSSNPIIVSCGWDKLVKVWNLANCKLKTNHI---GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GD 257 (340)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SS
T ss_pred CCCCcEEEEEcCCCEEEEEECCCCceeeEec---CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-Cc
Confidence 64 578899999999999999999888887 6889999999999999999999999999999999998888864 46
Q ss_pred CCceEEeCCCCcEEEEecCc-eEEeccCCcc
Q 036585 262 EPPVIKWAPGSLMFVTGSSE-LSFWIPDLSK 291 (304)
Q Consensus 262 ~i~~~~~~~~~~~l~s~~~d-~~iw~~~~~~ 291 (304)
.+.+++|+|++.+++++... +++|+++...
T Consensus 258 ~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~ 288 (340)
T 4aow_A 258 IINALCFSPNRYWLCAATGPSIKIWDLEGKI 288 (340)
T ss_dssp CEEEEEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred eEEeeecCCCCceeeccCCCEEEEEECCCCe
Confidence 89999999998877766655 9999987543
No 91
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.7e-36 Score=241.28 Aligned_cols=199 Identities=15% Similarity=0.161 Sum_probs=167.8
Q ss_pred eeEeecccCcEEEEe--eCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 19 EILQSMEVGIYLVTA--SDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~--~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
..+.++|||++++++ +.|++|+|||+++++++..+. |...|.+++|+|+++++++++ ++.+++|+..+++.+.
T Consensus 137 ~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s----~~~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYIT----GSSLEVISTVTGSCIA 211 (365)
T ss_dssp EEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEEC----SSCEEEEETTTCCEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecc----ceeEEEEEeccCccee
Confidence 468999999998754 478999999999999998886 667899999999999999998 5667778777776543
Q ss_pred --ecccccccEEEEEEcCCCCEEEEcccCC----eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEec
Q 036585 97 --YFKGHHDRVVLLSLCSSKDCFISGSLDR----TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVG 170 (304)
Q Consensus 97 --~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
....|...|.+++|+|+++++++++.|+ .++.|++......... ...+.
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~-------------------------~~~~~ 266 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLR-------------------------SKQVT 266 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEE-------------------------EEEEE
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceeccee-------------------------eeeec
Confidence 4456888999999999999999998887 6888887765432211 12334
Q ss_pred CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCC
Q 036585 171 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRS 249 (304)
Q Consensus 171 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~ 249 (304)
+|...|++++|+|+|++|++|+.|++|++||+++++++..+. .+|...|++++|+|||++||+|+.|++|+|||+..
T Consensus 267 ~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~--~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 267 NRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK--QAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET--TSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec--CcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 678899999999999999999999999999999999887753 26899999999999999999999999999999954
No 92
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1e-36 Score=241.54 Aligned_cols=208 Identities=17% Similarity=0.235 Sum_probs=171.6
Q ss_pred eecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCce--eeeecccccccEEEEEEcC--CCCEEEEcccCCeEE
Q 036585 52 TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK--YSRYFKGHHDRVVLLSLCS--SKDCFISGSLDRTVL 127 (304)
Q Consensus 52 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~ 127 (304)
.+.+|...|.+++|+|++++|++++. |++|++||+.+++ .+..+.+|.++|.+++|+| ++++|++++.|++|+
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~---D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSS---DRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEET---TTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeC---CCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 45689999999999999999999998 9999999998764 4677889999999999986 488999999999999
Q ss_pred EEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecC--CcEEEEeeCCCeEEEEEcCCC
Q 036585 128 LWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSND--GRLMLLTTMEGHIHVLDSFRG 205 (304)
Q Consensus 128 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~ 205 (304)
+||++++..... ..+.+|...|.+++|+|+ +.+|++++.||.|++||++++
T Consensus 85 iWd~~~~~~~~~---------------------------~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 85 IWREENGTWEKS---------------------------HEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp EECCSSSCCCEE---------------------------EEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred EEECCCCcceEE---------------------------EEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 999987642211 123368889999999998 789999999999999999876
Q ss_pred ceeEEEEeCCCCCCcceEEEEcCC-----------------CcEEEEecCCCcEEEEecCCC---ceeeeeeccCCCCce
Q 036585 206 TLLSTYNVKPVSRNSTLEASFSPE-----------------GMFVISGSGDGSVHAWSVRSG---KEVASWMSFDTEPPV 265 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~i~~~~~s~~-----------------~~~l~~~~~dg~i~v~d~~~~---~~~~~~~~~~~~i~~ 265 (304)
...........|...+.+++|+|+ +++|++|+.|+.|++||++.. +++..+.+|...|.+
T Consensus 138 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~ 217 (316)
T 3bg1_A 138 GQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRD 217 (316)
T ss_dssp SCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEE
T ss_pred CCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEE
Confidence 433222233468889999999997 478999999999999999755 456778899999999
Q ss_pred EEeCCCC----cEEEEecCc--eEEeccCC
Q 036585 266 IKWAPGS----LMFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 266 ~~~~~~~----~~l~s~~~d--~~iw~~~~ 289 (304)
++|+|++ .+|++++.| ++||+.+.
T Consensus 218 v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 218 VAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp EECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred EEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 9999987 889999999 99998864
No 93
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=2.8e-35 Score=227.85 Aligned_cols=230 Identities=12% Similarity=0.190 Sum_probs=174.3
Q ss_pred EEEEeeCCCeEEEEecCCc---ceeeeecccccc-------------------------eeEEEEccC----CCeEEEEe
Q 036585 29 YLVTASDDESIRLYDVTAA---TCLKTINSKKYG-------------------------VDLVCFTSH----PTTVIYSS 76 (304)
Q Consensus 29 ~l~~~~~d~~i~vw~~~~~---~~~~~~~~~~~~-------------------------v~~~~~~~~----~~~l~~~~ 76 (304)
.+++++. ..|++|+..++ +.++++.+|..+ |..++++|+ +..+++++
T Consensus 56 ~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g 134 (356)
T 2w18_A 56 CIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSG 134 (356)
T ss_dssp EEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEE
T ss_pred EEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCC
Confidence 5677776 58999999988 778888777653 556667777 66677655
Q ss_pred c-----------------CCCCCceEEEEc-cCceeeeecccccccEEEEEEcC---CCCEEEEcccCCeEEEEeCCcce
Q 036585 77 K-----------------NGWDESLRLLSL-HDNKYSRYFKGHHDRVVLLSLCS---SKDCFISGSLDRTVLLWDQRAEK 135 (304)
Q Consensus 77 ~-----------------~~~d~~i~vwd~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~ 135 (304)
. .+.|+.|++|++ .+++.+..+..|...+..++|+| ++.+|++++.|++|++||+++++
T Consensus 135 ~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk 214 (356)
T 2w18_A 135 NIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ 214 (356)
T ss_dssp EEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC
T ss_pred CeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc
Confidence 3 234888888888 44777777778888888888888 67899999999999999999999
Q ss_pred eeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEE------------EEeeCCCeEEEEEcC
Q 036585 136 CQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLM------------LLTTMEGHIHVLDSF 203 (304)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l------------~~~~~dg~i~~~d~~ 203 (304)
.+..+..+. .+...+.+++|+|+|+++ ++|+.|++|++||..
T Consensus 215 ~l~tL~g~~--------------------------~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 215 LLKKMHIDD--------------------------SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp EEEEEECCC-----------------------------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred EEEEEcCCC--------------------------cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 888775221 122467778999999876 557789999999999
Q ss_pred CCceeEEEEe--CCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCc-eEEeCCCCcEEEEecC
Q 036585 204 RGTLLSTYNV--KPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPP-VIKWAPGSLMFVTGSS 280 (304)
Q Consensus 204 ~~~~~~~~~~--~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~s~~~ 280 (304)
+++.+..+.. +.+|...+.+..+ ++.++++++.|++|+|||+.+++++.++.+|...+. +++|+|||++|++|+.
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 9988776542 2244444444444 478999999999999999999999999999987665 5899999999999999
Q ss_pred c--eEEecc
Q 036585 281 E--LSFWIP 287 (304)
Q Consensus 281 d--~~iw~~ 287 (304)
| |+||++
T Consensus 347 D~TIklWd~ 355 (356)
T 2w18_A 347 DGNIFVYHY 355 (356)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEecC
Confidence 9 999985
No 94
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.9e-35 Score=255.99 Aligned_cols=235 Identities=19% Similarity=0.281 Sum_probs=204.0
Q ss_pred eeeecccccceeEEEEccCC-CeEEEEecCCCCCceEEEEccCc-----eeeeecccccccEEEEEEcCCCCEEEEcccC
Q 036585 50 LKTINSKKYGVDLVCFTSHP-TTVIYSSKNGWDESLRLLSLHDN-----KYSRYFKGHHDRVVLLSLCSSKDCFISGSLD 123 (304)
Q Consensus 50 ~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~d~~i~vwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 123 (304)
...+.+|...|.+++|+|++ +.|++++. |++|++|++.+. .....+.+|...|.+++|+|++++|++++.|
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~---D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D 451 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASR---DKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD 451 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEET---TSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeC---CCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 45678999999999999875 67889998 999999999763 3456788999999999999999999999999
Q ss_pred CeEEEEeCCcceeeceEEEeccc--eeEecCCC--eEEEecCCCeEEEEec------------CCCCCceEEEEecCC--
Q 036585 124 RTVLLWDQRAEKCQGLLRVQGRP--AAAYDDQG--LVFGYEKGPLDIFSVG------------GDISDANVVKFSNDG-- 185 (304)
Q Consensus 124 g~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~-- 185 (304)
++|++||+.++.....+..+... .+.+++++ .+.+..++.+++|+.. +|...|.+++|+|++
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 99999999999888777655443 46677776 5557788999999752 467789999999987
Q ss_pred cEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCce
Q 036585 186 RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPV 265 (304)
Q Consensus 186 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~ 265 (304)
..+++++.|+.|++||+++++....+. .|...|++++|+|++++|++|+.||.|++||+++++.+..+. +...|.+
T Consensus 532 ~~l~s~s~d~~v~vwd~~~~~~~~~~~---~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~ 607 (694)
T 3dm0_A 532 PTIVSASWDKTVKVWNLSNCKLRSTLA---GHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHA 607 (694)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC---CCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEE
T ss_pred ceEEEEeCCCeEEEEECCCCcEEEEEc---CCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEE
Confidence 579999999999999999998888877 789999999999999999999999999999999999888776 4567999
Q ss_pred EEeCCCCcEEEEecCc-eEEeccCCcc
Q 036585 266 IKWAPGSLMFVTGSSE-LSFWIPDLSK 291 (304)
Q Consensus 266 ~~~~~~~~~l~s~~~d-~~iw~~~~~~ 291 (304)
++|+|++.+|++++.+ ++||+++...
T Consensus 608 ~~~sp~~~~l~~~~~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 608 LCFSPNRYWLCAATEHGIKIWDLESKS 634 (694)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTTE
T ss_pred EEEcCCCcEEEEEcCCCEEEEECCCCC
Confidence 9999999999988877 9999997654
No 95
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-36 Score=251.12 Aligned_cols=263 Identities=11% Similarity=0.179 Sum_probs=206.1
Q ss_pred EeecccCcEEEEeeCCCeEEEEecCCcceeeee-cccccceeEEEEcc-CCCeEEEEecCCCCCceEEEEccC---cee-
Q 036585 21 LQSMEVGIYLVTASDDESIRLYDVTAATCLKTI-NSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHD---NKY- 94 (304)
Q Consensus 21 i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~~~~d~~i~vwd~~~---~~~- 94 (304)
..+.++++.+++++ .|+ .+++.+..+ .+|...|.+++|+| ++++|++++. |+.|++||+.+ +..
T Consensus 33 ~~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~---dg~v~vwd~~~~~~~~~~ 102 (437)
T 3gre_A 33 KEFGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSD---QGVIKIWNLKEIIVGEVY 102 (437)
T ss_dssp GGGCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEET---TSEEEEEEHHHHHTTCCC
T ss_pred hhcCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecC---CceEEEeECcccccCccc
Confidence 34667788877765 388 457888888 88999999999999 9999999998 99999999987 432
Q ss_pred --eeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCC---cceeeceEEEeccceeE----------------ecCC
Q 036585 95 --SRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQR---AEKCQGLLRVQGRPAAA----------------YDDQ 153 (304)
Q Consensus 95 --~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~----------------~~~~ 153 (304)
...+ .|...|.+++|+|++++|++++.||.|++||++ +++............+. ++++
T Consensus 103 ~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 181 (437)
T 3gre_A 103 SSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEE 181 (437)
T ss_dssp SCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSS
T ss_pred ceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCC
Confidence 2223 589999999999999999999999999999995 44443333222111111 2233
Q ss_pred C--eEEEecCCCeEEEEec---------C--CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCc
Q 036585 154 G--LVFGYEKGPLDIFSVG---------G--DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNS 220 (304)
Q Consensus 154 ~--~~~~~~~~~~~~~~~~---------~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~ 220 (304)
+ .+.+..++.+.+|++. . |...|++++|+|++++|++++.||.|++||+++++.+..+.. .+...
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~ 259 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF--GDHAP 259 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC--TTCEE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec--CCCCc
Confidence 3 4446667788888753 3 678999999999999999999999999999999988887753 36678
Q ss_pred ceEEEEc----CCCcEEEEecCCCcEEEEecCCCceeeeeec--------------------------cCCCCceEEeCC
Q 036585 221 TLEASFS----PEGMFVISGSGDGSVHAWSVRSGKEVASWMS--------------------------FDTEPPVIKWAP 270 (304)
Q Consensus 221 i~~~~~s----~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--------------------------~~~~i~~~~~~~ 270 (304)
|.+++|+ |++.+|++++.||.|++||+++++.+..+.+ |...|++++|+
T Consensus 260 v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~- 338 (437)
T 3gre_A 260 ITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS- 338 (437)
T ss_dssp EEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-
T ss_pred eEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-
Confidence 9999555 5688999999999999999999887776654 44557888888
Q ss_pred CCcEEEEecCc--eEEeccCCcc-cccccc
Q 036585 271 GSLMFVTGSSE--LSFWIPDLSK-LGAYVG 297 (304)
Q Consensus 271 ~~~~l~s~~~d--~~iw~~~~~~-~~~~~~ 297 (304)
++++|++++.| +++|++...+ +..+.+
T Consensus 339 ~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 339 NDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp TTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred CceEEEecCCCCeEEEEECCCcccceEEec
Confidence 77899999988 9999986544 444444
No 96
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.8e-36 Score=241.14 Aligned_cols=224 Identities=18% Similarity=0.248 Sum_probs=189.6
Q ss_pred eeEeeccc----CcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEcc-CCCeEEEEecCCCCCceEEEEccCce
Q 036585 19 EILQSMEV----GIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNK 93 (304)
Q Consensus 19 ~~i~~~~~----~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~ 93 (304)
..+.++++ |++|++++.||.|++||+.+++.+..+.+|...|.+++|+| ++..|++++. |+.|++||+.+++
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~ 149 (366)
T 3k26_A 73 YTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK---DHALRLWNIQTDT 149 (366)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET---TSCEEEEETTTTE
T ss_pred EEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC---CCeEEEEEeecCe
Confidence 44678888 67999999999999999999999999999999999999999 8999999998 9999999999999
Q ss_pred eeeec---ccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEE----------------------------
Q 036585 94 YSRYF---KGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV---------------------------- 142 (304)
Q Consensus 94 ~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------------------------- 142 (304)
.+..+ ..|...|.+++|+|++++|++++.||.|++||+++++....+..
T Consensus 150 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T 3k26_A 150 LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDI 229 (366)
T ss_dssp EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSS
T ss_pred EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccC
Confidence 88887 68999999999999999999999999999999997765432211
Q ss_pred --eccceeEecCCCeEEEecCCCeEEEEecC-----------------------CCCCceEEEEecC--CcEEEEeeCCC
Q 036585 143 --QGRPAAAYDDQGLVFGYEKGPLDIFSVGG-----------------------DISDANVVKFSND--GRLMLLTTMEG 195 (304)
Q Consensus 143 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~v~~~~~~~~--~~~l~~~~~dg 195 (304)
.....+.++++..+.+..++.+.+|++.. |...|.+++|+|+ +++|++++.||
T Consensus 230 ~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg 309 (366)
T 3k26_A 230 HRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVG 309 (366)
T ss_dssp CSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTS
T ss_pred CcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCC
Confidence 11223455555556666778888887643 5567889999999 99999999999
Q ss_pred eEEEEEcCCCceeE----EEEeCCCC--CCcceEEEEcCCCcEEEEecCCCcEEEEecC
Q 036585 196 HIHVLDSFRGTLLS----TYNVKPVS--RNSTLEASFSPEGMFVISGSGDGSVHAWSVR 248 (304)
Q Consensus 196 ~i~~~d~~~~~~~~----~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~ 248 (304)
.|++||+++++... .+. .+ ...|++++|+|++++|++++.||.|++||+.
T Consensus 310 ~i~vwd~~~~~~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 310 KLYVWDLEVEDPHKAKCTTLT---HHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CEEEEECCSSSGGGCEEEEEC---CTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cEEEEECCCCCCccccceEEc---ccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999999876443 343 34 7899999999999999999999999999985
No 97
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-35 Score=244.17 Aligned_cols=239 Identities=14% Similarity=0.061 Sum_probs=201.7
Q ss_pred eeeEeecccCcEE-EEeeCCCeEEEEecC--Ccceeeeec--ccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCc
Q 036585 18 EEILQSMEVGIYL-VTASDDESIRLYDVT--AATCLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN 92 (304)
Q Consensus 18 ~~~i~~~~~~~~l-~~~~~d~~i~vw~~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~ 92 (304)
...+.++|+|++| ++++.||.|++||+. +++.+..+. .|...|.+++|+|++++|++++. ++.|++|++.++
T Consensus 105 v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---~g~v~~~~~~~~ 181 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK---FGDVYSIDINSI 181 (450)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEEEEEETTSC
T ss_pred eEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC---CCcEEEEecCCc
Confidence 4457889999996 899999999999999 888888887 45688999999999999999998 999999999887
Q ss_pred eeee----ecccccccEEEEEEcCC---CCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeE
Q 036585 93 KYSR----YFKGHHDRVVLLSLCSS---KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLD 165 (304)
Q Consensus 93 ~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
+... .+.+|...|.+++|+|+ +++|++++.|+.|++||+++++....+
T Consensus 182 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~------------------------- 236 (450)
T 2vdu_B 182 PEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW------------------------- 236 (450)
T ss_dssp CCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE-------------------------
T ss_pred ccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee-------------------------
Confidence 7554 77889999999999999 999999999999999999877654332
Q ss_pred EEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCC----------------------CCCCcceE
Q 036585 166 IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP----------------------VSRNSTLE 223 (304)
Q Consensus 166 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~----------------------~~~~~i~~ 223 (304)
+.+|...|.+++|+ ++++|++++.|+.|++||+++++.+..+.... .....+..
T Consensus 237 ---~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 237 ---LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK 312 (450)
T ss_dssp ---CCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEE
T ss_pred ---ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEE
Confidence 12577899999999 99999999999999999999999888876321 23457889
Q ss_pred EEEcCCCcEEEEec-CCCcEEEEec--CCC---ceeeeeeccCCCCceEEeCCCCcEEEEecC-------c-eEEeccCC
Q 036585 224 ASFSPEGMFVISGS-GDGSVHAWSV--RSG---KEVASWMSFDTEPPVIKWAPGSLMFVTGSS-------E-LSFWIPDL 289 (304)
Q Consensus 224 ~~~s~~~~~l~~~~-~dg~i~v~d~--~~~---~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~-------d-~~iw~~~~ 289 (304)
++|+|++++|++++ .|+.|++|++ .++ +.+..+..| ..|.+++|+|++.++++++. + +++|.++.
T Consensus 313 i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 313 IIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 99999999999998 8999999999 555 566777777 88999999997655555443 2 78997754
No 98
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5e-35 Score=239.15 Aligned_cols=242 Identities=14% Similarity=0.116 Sum_probs=204.1
Q ss_pred eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCce------eeeecccccccEEEEEEcCC----C---C
Q 036585 49 CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK------YSRYFKGHHDRVVLLSLCSS----K---D 115 (304)
Q Consensus 49 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~ 115 (304)
....+.+|...|.+++|+| +.|++++. |+.|++||+.+++ .+..+.+|...|.+++|+|+ + +
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~ 82 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSG---DGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 82 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEET---TSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcC---CCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcccc
Confidence 3466789999999999998 79999998 9999999999887 67888899999999999999 9 9
Q ss_pred EEEEcccCCeEEEEeCCccee-----eceEEEe-------ccceeEec----CCCe---EEEecCCCeEEEEecC-----
Q 036585 116 CFISGSLDRTVLLWDQRAEKC-----QGLLRVQ-------GRPAAAYD----DQGL---VFGYEKGPLDIFSVGG----- 171 (304)
Q Consensus 116 ~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~-------~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~----- 171 (304)
+|++++.|+.|++||+.+++. ...+... ....+.+. +++. +.+..++.+.+|++..
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 162 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred EEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccc
Confidence 999999999999999988775 4444333 22346677 6654 3466788999998765
Q ss_pred ----------------------CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCC---CCcceEEEE
Q 036585 172 ----------------------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS---RNSTLEASF 226 (304)
Q Consensus 172 ----------------------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~---~~~i~~~~~ 226 (304)
|...+.+++|+|++ ++++++.||.|++||+++++.+..+.....| ...+.+++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEE
Confidence 45668999999999 9999999999999999999999888831126 889999999
Q ss_pred cCCCcEEEEecCC---CcEEEEecCCCceeeeeec-------------cCCCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 227 SPEGMFVISGSGD---GSVHAWSVRSGKEVASWMS-------------FDTEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 227 s~~~~~l~~~~~d---g~i~v~d~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
+|++++|++++.| +.|++||+++++.+..+.. |...|.+++|+|++++|++++.| +++|++.
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 9999999999999 9999999999999999988 99999999999999999999988 9999986
Q ss_pred Ccc-ccccc
Q 036585 289 LSK-LGAYV 296 (304)
Q Consensus 289 ~~~-~~~~~ 296 (304)
..+ +..+.
T Consensus 322 ~~~~~~~~~ 330 (397)
T 1sq9_A 322 TKERITTLN 330 (397)
T ss_dssp TTEEEEEEE
T ss_pred CCceeEEEe
Confidence 543 44454
No 99
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.8e-34 Score=229.23 Aligned_cols=260 Identities=12% Similarity=0.153 Sum_probs=199.0
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeec
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYF 98 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~ 98 (304)
..+.++|+|++|++|+.++ +++|++++++....... ..+..+++.++++.++..+.. |+.|++||+.+++.+..+
T Consensus 23 ~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--d~~v~iWd~~~~~~~~~~ 97 (355)
T 3vu4_A 23 TDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--RHLSKVRMLHRTNYVAFVTGV--KEVVHIWDDVKKQDVSRI 97 (355)
T ss_dssp CEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--SCCCEEEECTTSSEEEEECSS--TTEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--CCeEEEEEcCCCCEEEEEECC--ccEEEEEECCCCcEEEEE
Confidence 3578999999999998775 88999988776655433 258889999999888654432 899999999999998888
Q ss_pred ccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcc-eeeceEEEeccceeEecCCCeEE--EecCCCeEEEEe------
Q 036585 99 KGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAE-KCQGLLRVQGRPAAAYDDQGLVF--GYEKGPLDIFSV------ 169 (304)
Q Consensus 99 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------ 169 (304)
. +...|.++.|+++. ++++ .|+.|++||+.+. +....+.. .....++++...++ +..++.+.+|++
T Consensus 98 ~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~ 172 (355)
T 3vu4_A 98 K-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR-FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSA 172 (355)
T ss_dssp E-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-EEEEEEEETTEEEEEESSCTTCEEEEECCC----
T ss_pred E-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-CCceEEEEccEEEEeCCCcCcEEEEEECCCCCcc
Confidence 7 67799999998764 3333 4789999999988 66555544 22233344433333 244555655554
Q ss_pred -------------------cCCCCCceEEEEecCCcEEEEeeCCCe-EEEEEcCCCceeEEEEeCCCCCCcceEEEEcCC
Q 036585 170 -------------------GGDISDANVVKFSNDGRLMLLTTMEGH-IHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 229 (304)
Q Consensus 170 -------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 229 (304)
.+|...|.+++|+|+|++|++++.||+ |++||+++++.+..+... .|...|.+++|+|+
T Consensus 173 ~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g-~h~~~v~~~~~s~~ 251 (355)
T 3vu4_A 173 TTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG-LDRADVVDMKWSTD 251 (355)
T ss_dssp --------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT-TCCSCEEEEEECTT
T ss_pred ccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC-CCCCcEEEEEECCC
Confidence 457889999999999999999999998 999999999999888721 27789999999999
Q ss_pred CcEEEEecCCCcEEEEecCCCcee--eee---------------------eccCCCCceEEeCCCCcEEEEecCc--eEE
Q 036585 230 GMFVISGSGDGSVHAWSVRSGKEV--ASW---------------------MSFDTEPPVIKWAPGSLMFVTGSSE--LSF 284 (304)
Q Consensus 230 ~~~l~~~~~dg~i~v~d~~~~~~~--~~~---------------------~~~~~~i~~~~~~~~~~~l~s~~~d--~~i 284 (304)
+++|++++.|+.|++||++..... ..+ .....+...++|+|+++++++++.| +++
T Consensus 252 ~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~ 331 (355)
T 3vu4_A 252 GSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIET 331 (355)
T ss_dssp SCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEE
Confidence 999999999999999999765321 111 0112234779999999999999988 777
Q ss_pred eccCC
Q 036585 285 WIPDL 289 (304)
Q Consensus 285 w~~~~ 289 (304)
|++..
T Consensus 332 ~~~~~ 336 (355)
T 3vu4_A 332 FKVVF 336 (355)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 87643
No 100
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-35 Score=241.17 Aligned_cols=235 Identities=11% Similarity=0.056 Sum_probs=186.9
Q ss_pred eecceeeEeecccCcEEEEeeCCCeEEEEecCCc-----------------------------ceeeeec-ccccceeEE
Q 036585 14 LELSEEILQSMEVGIYLVTASDDESIRLYDVTAA-----------------------------TCLKTIN-SKKYGVDLV 63 (304)
Q Consensus 14 ~~~~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~-----------------------------~~~~~~~-~~~~~v~~~ 63 (304)
++.-...+.++|||+++|+++.|++|+ |.+.+ +....+. .|...|.++
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~v 91 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVC 91 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEE
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEE
Confidence 344556799999999999999999995 33322 2111222 456789999
Q ss_pred EEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccc-----cEEEEEEcCCCCEEEEcccCCeEEEEeCCccee--
Q 036585 64 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHD-----RVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKC-- 136 (304)
Q Consensus 64 ~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-- 136 (304)
+|+|+|+.|++++. ||.|++||.++ .+..+. |.. .+.+++|+|+|++|++|+.||+|++||+.++..
T Consensus 92 awSPdG~~LAs~s~---dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~ 165 (588)
T 2j04_A 92 KPSPIDDWMAVLSN---NGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENT 165 (588)
T ss_dssp EECSSSSCEEEEET---TSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTC
T ss_pred EECCCCCEEEEEeC---CCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccc
Confidence 99999999999998 99999999654 566666 665 499999999999999999999999999987642
Q ss_pred -----eceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCcee---
Q 036585 137 -----QGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL--- 208 (304)
Q Consensus 137 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~--- 208 (304)
...+... ..+|...|.+++|+|+| +++++.|+.|++||+.+++..
T Consensus 166 ~~~i~l~ti~~~-------------------------~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~ 218 (588)
T 2j04_A 166 PEFYFESSIRLS-------------------------DAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVS 218 (588)
T ss_dssp CCCEEEEEEECS-------------------------CTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCE
T ss_pred ccceeeeeeecc-------------------------cccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccce
Confidence 1111111 13577899999999999 888999999999999887743
Q ss_pred EEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEe--CCCCcEEEEecCc-eEEe
Q 036585 209 STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKW--APGSLMFVTGSSE-LSFW 285 (304)
Q Consensus 209 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~--~~~~~~l~s~~~d-~~iw 285 (304)
.++.. .|...|.+++|+ +++||+++ ++.|++||+.+++......+|...+..++| +|++..+++++++ .++|
T Consensus 219 ~tL~~--~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~klw 293 (588)
T 2j04_A 219 RMIQN--ASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSYKVL 293 (588)
T ss_dssp EEEEC--CCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEEEEE
T ss_pred eeecc--cccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCCEEE
Confidence 34421 477899999999 68999887 699999999887763333389999999999 9999999999988 5599
Q ss_pred ccC
Q 036585 286 IPD 288 (304)
Q Consensus 286 ~~~ 288 (304)
..+
T Consensus 294 ~~d 296 (588)
T 2j04_A 294 LED 296 (588)
T ss_dssp ESS
T ss_pred eec
Confidence 876
No 101
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=5.9e-34 Score=237.55 Aligned_cols=265 Identities=19% Similarity=0.315 Sum_probs=214.4
Q ss_pred ceeeeecceee---EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEc--cCCCeEEEEecCCCCCce
Q 036585 10 DKVSLELSEEI---LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFT--SHPTTVIYSSKNGWDESL 84 (304)
Q Consensus 10 ~~~~~~~~~~~---i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~~~~d~~i 84 (304)
....+.+|... +.+++++ +|++|+.||+|++||+++++.+..+.+|...|.+++|+ ++++.+++++. |+.|
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~---d~~i 229 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSR---DNTL 229 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEET---TSCE
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcC---CCcE
Confidence 34455566555 4455566 99999999999999999999999999999999999999 47788999998 9999
Q ss_pred EEEEccCcee-----------------------eeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEE
Q 036585 85 RLLSLHDNKY-----------------------SRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR 141 (304)
Q Consensus 85 ~vwd~~~~~~-----------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 141 (304)
++||+.+++. +..+.+|...+.++ +++++++++++.|+.|++||+++++....+.
T Consensus 230 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~ 307 (464)
T 3v7d_B 230 HVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILS 307 (464)
T ss_dssp EEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 9999987652 44567788888877 5678899999999999999999988877765
Q ss_pred Eeccc--eeEecCCC--eEEEecCCCeEEEEec---------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCcee
Q 036585 142 VQGRP--AAAYDDQG--LVFGYEKGPLDIFSVG---------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL 208 (304)
Q Consensus 142 ~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 208 (304)
.+... .+.+++++ .+.+..++.+++|++. +|...|.+++|+ +++|++++.||.|++||+++++..
T Consensus 308 ~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 308 GHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCcee
Confidence 44333 45677765 4556777888888764 578899999997 579999999999999999998877
Q ss_pred EEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeee-eeccCCCCceEEeCCCCcEEEEecCc--eEEe
Q 036585 209 STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVAS-WMSFDTEPPVIKWAPGSLMFVTGSSE--LSFW 285 (304)
Q Consensus 209 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw 285 (304)
.... +...+..++|+|+++++++++ ||.|++||+++++.+.. +..|...|.+++|+ +..++++++.+ +.+|
T Consensus 386 ~~~~----~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 386 FSYH----HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EEEE----CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred eeec----CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 6665 667788899999999999998 89999999999999876 57789999999997 34455555555 4444
Q ss_pred ccC
Q 036585 286 IPD 288 (304)
Q Consensus 286 ~~~ 288 (304)
.++
T Consensus 460 ~ld 462 (464)
T 3v7d_B 460 ILD 462 (464)
T ss_dssp EEE
T ss_pred Eee
Confidence 443
No 102
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-34 Score=234.77 Aligned_cols=213 Identities=16% Similarity=0.276 Sum_probs=181.4
Q ss_pred cceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEcc--CceeeeecccccccEEEEEEcCC--CCEEEEccc
Q 036585 47 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DNKYSRYFKGHHDRVVLLSLCSS--KDCFISGSL 122 (304)
Q Consensus 47 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~ 122 (304)
|+++..+.+|...|.+++|+|++++|++++. |+.|++||+. +++.+..+.+|...|.+++|+|+ +++|++++.
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSS---DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEET---TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEEC---CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc
Confidence 3567788999999999999999999999998 9999999998 66777888999999999999977 899999999
Q ss_pred CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecC--CcEEEEeeCCCeEEEE
Q 036585 123 DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSND--GRLMLLTTMEGHIHVL 200 (304)
Q Consensus 123 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~ 200 (304)
||.|++||+++++..... .+..|...|.+++|+|+ +.+|++++.||.|++|
T Consensus 78 dg~v~iwd~~~~~~~~~~---------------------------~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~ 130 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIA---------------------------VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVV 130 (379)
T ss_dssp TSCEEEEEEETTEEEEEE---------------------------EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEE
T ss_pred CCEEEEEEcCCCceeEee---------------------------eecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEE
Confidence 999999999887532222 22357788999999999 9999999999999999
Q ss_pred EcCCCceeEEEEeCCCCCCcceEEEEcC-------------CCcEEEEecCCCcEEEEecCCCc----eeeeeeccCCCC
Q 036585 201 DSFRGTLLSTYNVKPVSRNSTLEASFSP-------------EGMFVISGSGDGSVHAWSVRSGK----EVASWMSFDTEP 263 (304)
Q Consensus 201 d~~~~~~~~~~~~~~~~~~~i~~~~~s~-------------~~~~l~~~~~dg~i~v~d~~~~~----~~~~~~~~~~~i 263 (304)
|++++......... .+...+.+++|+| ++.+|++++.|+.|++||+++++ ....+.+|..+|
T Consensus 131 d~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v 209 (379)
T 3jrp_A 131 EFKENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 209 (379)
T ss_dssp ECCTTSCCCEEEEE-CCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred ecCCCCceeeEEec-CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcE
Confidence 99887443333221 5888999999999 69999999999999999998765 345677899999
Q ss_pred ceEEeCCC---CcEEEEecCc--eEEeccCCc
Q 036585 264 PVIKWAPG---SLMFVTGSSE--LSFWIPDLS 290 (304)
Q Consensus 264 ~~~~~~~~---~~~l~s~~~d--~~iw~~~~~ 290 (304)
.+++|+|+ +.+|++++.| +++|+++..
T Consensus 210 ~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 210 RDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred eEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 99999999 8999999998 999998764
No 103
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=258.19 Aligned_cols=238 Identities=11% Similarity=0.179 Sum_probs=192.1
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
...+.++|++++||+|+.||.|+||+..+.+....+. |..+|.+++|+| +++|++++. |+.|++||+.+++.+..
T Consensus 20 V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~-~~~~V~~l~fsp-g~~L~S~s~---D~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE-DRSAIKEMRFVK-GIYLVVINA---KDTVYVLSLYSQKVLTT 94 (902)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS-SCCCEEEEEEET-TTEEEEEET---TCEEEEEETTTCSEEEE
T ss_pred cEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC-CCCCEEEEEEcC-CCEEEEEEC---cCeEEEEECCCCcEEEE
Confidence 3467899999999999999999999998877665554 778999999999 889999998 99999999999998888
Q ss_pred cccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCce
Q 036585 98 FKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDAN 177 (304)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 177 (304)
+. |...|++++|+|+++++++|+.||.|++||+++++.. .+........ .....+|...|.
T Consensus 95 ~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~-----------------~~~~~~h~~~V~ 155 (902)
T 2oaj_A 95 VF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKS-----------------SFFPAARLSPIV 155 (902)
T ss_dssp EE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHH-----------------HTCSSSCCCCCC
T ss_pred Ec-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceecccccc-----------------ccccccCCCCeE
Confidence 86 7789999999999999999999999999999987653 1211000000 001236888999
Q ss_pred EEEEecC-CcEEEEeeCCCeEEEEEcCCCceeEEEEeC---------------CCCCCcceEEEEcCCCcEEEEecCCCc
Q 036585 178 VVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVK---------------PVSRNSTLEASFSPEGMFVISGSGDGS 241 (304)
Q Consensus 178 ~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~---------------~~~~~~i~~~~~s~~~~~l~~~~~dg~ 241 (304)
+++|+|+ +..+++|+.||.| +||+++++....+..+ ..|...|++++|+|+|++|++++.||.
T Consensus 156 sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~ 234 (902)
T 2oaj_A 156 SIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS 234 (902)
T ss_dssp EEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC
T ss_pred EEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe
Confidence 9999996 5789999999999 9999999888877632 123467999999999999999999999
Q ss_pred EEEEecCCCceeee--e---ec-------------cCCCCceEEeC----CCC-cEEEEecC
Q 036585 242 VHAWSVRSGKEVAS--W---MS-------------FDTEPPVIKWA----PGS-LMFVTGSS 280 (304)
Q Consensus 242 i~v~d~~~~~~~~~--~---~~-------------~~~~i~~~~~~----~~~-~~l~s~~~ 280 (304)
|++||+++++++.. + .. |..+|++++|+ |++ .+|++|+.
T Consensus 235 i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~ 296 (902)
T 2oaj_A 235 LVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKS 296 (902)
T ss_dssp EEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEEC
T ss_pred EEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCC
Confidence 99999999887653 2 12 34579999995 554 56777754
No 104
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.2e-34 Score=235.83 Aligned_cols=220 Identities=14% Similarity=0.159 Sum_probs=185.9
Q ss_pred EecCCcceeeeecccccceeEEEEccCC-CeEEEEecCCCCCceEEEEccCceeeeecc--cccccEEEEEEcC-CCCEE
Q 036585 42 YDVTAATCLKTINSKKYGVDLVCFTSHP-TTVIYSSKNGWDESLRLLSLHDNKYSRYFK--GHHDRVVLLSLCS-SKDCF 117 (304)
Q Consensus 42 w~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l 117 (304)
|++.+.+....+.+|...|.+++|+|++ ++|++++. |+.|++||+.+++....+. +|...|.+++|+| ++++|
T Consensus 58 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 134 (383)
T 3ei3_B 58 RSLKSYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSK---GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQL 134 (383)
T ss_dssp HHHTTCEEEEEECCCSSCEEEEEECSSCTTEEEEEEB---TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEE
T ss_pred ccccccceEEeccCCCCCEEEEEECCCCCCEEEEEcC---CCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEE
Confidence 3445566777888999999999999999 89999998 9999999999887766655 6999999999999 77899
Q ss_pred EEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeE
Q 036585 118 ISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHI 197 (304)
Q Consensus 118 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 197 (304)
++++.|+.|++||++.. ....+... ..+...+.+++|+|++++|++++.||.|
T Consensus 135 ~s~~~d~~i~iwd~~~~-~~~~~~~~--------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i 187 (383)
T 3ei3_B 135 FVSSIRGATTLRDFSGS-VIQVFAKT--------------------------DSWDYWYCCVDVSVSRQMLATGDSTGRL 187 (383)
T ss_dssp EEEETTTEEEEEETTSC-EEEEEECC--------------------------CCSSCCEEEEEEETTTTEEEEEETTSEE
T ss_pred EEEeCCCEEEEEECCCC-ceEEEecc--------------------------CCCCCCeEEEEECCCCCEEEEECCCCCE
Confidence 99999999999999853 22222211 1345789999999999999999999999
Q ss_pred EEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCc-EEEEecCCCcEEEEecCC----CceeeeeeccCCCCceEEeCC-C
Q 036585 198 HVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGSGDGSVHAWSVRS----GKEVASWMSFDTEPPVIKWAP-G 271 (304)
Q Consensus 198 ~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~v~d~~~----~~~~~~~~~~~~~i~~~~~~~-~ 271 (304)
++||+ +++.+..+. .|...|.+++|+|+++ +|++++.|+.|++||+++ +..+..+ +|...|++++|+| +
T Consensus 188 ~i~d~-~~~~~~~~~---~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~ 262 (383)
T 3ei3_B 188 LLLGL-DGHEIFKEK---LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTD 262 (383)
T ss_dssp EEEET-TSCEEEEEE---CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTT
T ss_pred EEEEC-CCCEEEEec---cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCC
Confidence 99998 577777777 6889999999999999 999999999999999987 5555555 6999999999999 9
Q ss_pred CcEEEEecCc--eEEeccCCcc-ccccc
Q 036585 272 SLMFVTGSSE--LSFWIPDLSK-LGAYV 296 (304)
Q Consensus 272 ~~~l~s~~~d--~~iw~~~~~~-~~~~~ 296 (304)
+.+|++++.| +++|++...+ +..+.
T Consensus 263 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 263 STKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp SCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCccccccc
Confidence 9999999988 9999986543 34443
No 105
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.9e-34 Score=254.15 Aligned_cols=239 Identities=14% Similarity=0.165 Sum_probs=212.8
Q ss_pred ceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEE
Q 036585 48 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVL 127 (304)
Q Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 127 (304)
+..+.+.+|...|.+++|+|++++|++++. ||.|++||+.+++.+..+.+|..+|.+++|+|++++|++++.||.|+
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~---~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~ 80 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLY---SGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEET---TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeC---CCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE
Confidence 456778899999999999999999999998 99999999999999999999999999999999999999999999999
Q ss_pred EEeCCcceeeceEEEecc--ceeEecCCC--eEEEecCCCeEEEEec----------CCCCCceEEEEec-CCcEEEEee
Q 036585 128 LWDQRAEKCQGLLRVQGR--PAAAYDDQG--LVFGYEKGPLDIFSVG----------GDISDANVVKFSN-DGRLMLLTT 192 (304)
Q Consensus 128 iwd~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~----------~~~~~v~~~~~~~-~~~~l~~~~ 192 (304)
+||+.+++....+..+.. ..+.+++++ .+.+..++.+.+|++. +|...+.+++|+| ++..+++++
T Consensus 81 vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred EEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 999999988877765443 356788887 4456677888888764 3678899999999 899999999
Q ss_pred CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcC--CCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCC
Q 036585 193 MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP--EGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAP 270 (304)
Q Consensus 193 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~ 270 (304)
.||.|++||+.+++....+.. .+...+..++|+| ++++|++++.||.|++||+.+++.+..+.+|...|++++|+|
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 238 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTT--GQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEEC--CCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred CCCeEEEEECCCCcceeEEec--CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcC
Confidence 999999999998888777763 2448899999999 999999999999999999999999999999999999999999
Q ss_pred CCcEEEEecCc--eEEeccCCcc
Q 036585 271 GSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 271 ~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
++++|++++.| +++|+....+
T Consensus 239 ~~~~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 239 TLPIIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp SSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999988 9999987543
No 106
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.3e-35 Score=243.97 Aligned_cols=208 Identities=15% Similarity=0.155 Sum_probs=170.9
Q ss_pred eeeeecccccceeEEEEcc-CCCeEEEEecCCCCCceEEEEccCcee--eeecccccccEEEEEEcC-CCCEEEEcccCC
Q 036585 49 CLKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNKY--SRYFKGHHDRVVLLSLCS-SKDCFISGSLDR 124 (304)
Q Consensus 49 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg 124 (304)
.......|...|++++|+| +++.|++|+. ||.|+|||+.+++. ...+.+|.+.|++++|+| ++++|++++.||
T Consensus 111 ~~~~~~~~~~~V~~l~~~P~~~~~lasGs~---dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 111 ILQKAAPFDRRATSLAWHPTHPSTVAVGSK---GGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp SCCEEEECSSCEEEEEECSSCTTCEEEEET---TSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSS
T ss_pred ecccCCCCCCCEEEEEEeCCCCCEEEEEeC---CCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC
Confidence 3445567888899999999 5668999998 99999999987654 345568999999999998 688999999999
Q ss_pred eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCC
Q 036585 125 TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 204 (304)
Q Consensus 125 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 204 (304)
+|++||+++......... ..+...+.+++|+|++++|++|+.||.|++||++.
T Consensus 188 ~v~iwd~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~ 240 (435)
T 4e54_B 188 TTRLQDFKGNILRVFASS---------------------------DTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG 240 (435)
T ss_dssp CEEEEETTSCEEEEEECC---------------------------SSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS
T ss_pred EEEEeeccCCceeEEecc---------------------------CCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc
Confidence 999999986543221110 12345678899999999999999999999999864
Q ss_pred CceeEEEEeCCCCCCcceEEEEcCCCc-EEEEecCCCcEEEEecCCCceeee---eeccCCCCceEEeCCCCcEEEEecC
Q 036585 205 GTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGSGDGSVHAWSVRSGKEVAS---WMSFDTEPPVIKWAPGSLMFVTGSS 280 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~v~d~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~s~~~ 280 (304)
+.+..+. .|...|++++|+|++. +|++++.|+.|++||+++.+.... ..+|..+|++++|+|++.+|++++.
T Consensus 241 -~~~~~~~---~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~ 316 (435)
T 4e54_B 241 -KELWNLR---MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ 316 (435)
T ss_dssp -CBCCCSB---CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES
T ss_pred -ceeEEEe---cccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcC
Confidence 4444554 6889999999999876 788999999999999988765433 3679999999999999999999999
Q ss_pred c--eEEeccCCc
Q 036585 281 E--LSFWIPDLS 290 (304)
Q Consensus 281 d--~~iw~~~~~ 290 (304)
| ++||+....
T Consensus 317 D~~i~iwd~~~~ 328 (435)
T 4e54_B 317 KSEIRVYSASQW 328 (435)
T ss_dssp SSCEEEEESSSS
T ss_pred CCEEEEEECCCC
Confidence 9 999998653
No 107
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.8e-33 Score=232.62 Aligned_cols=261 Identities=12% Similarity=0.169 Sum_probs=214.9
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceee-----eecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLK-----TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 94 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~ 94 (304)
.+.+++++.++++++.++.|++||+.+++... .+.+|...+.+++|+|++..+++++. |+.|++||+.+++.
T Consensus 127 ~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~---d~~v~~~d~~~~~~ 203 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQ---ANAVHVFDLKTLAY 203 (433)
T ss_dssp CCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGG---GTEEEEEETTTCCE
T ss_pred EEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECC---CCEEEEEECCCceE
Confidence 47788878888888899999999999998877 45578889999999999999999988 99999999999998
Q ss_pred eeecccccccEEEEEEcCCCCEEE-EcccCCeEEEEeCCcceeeceEEEec-cceeEecCCCeEE--Ee--------cCC
Q 036585 95 SRYFKGHHDRVVLLSLCSSKDCFI-SGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGLVF--GY--------EKG 162 (304)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~--------~~~ 162 (304)
+..+..|...+.+++|+|+++.++ +++.|+.|++||+++++....+.... ...+.+++++..+ +. .++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg 283 (433)
T 3bws_A 204 KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGG 283 (433)
T ss_dssp EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCE
T ss_pred EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCC
Confidence 888888999999999999999875 55589999999999887766554432 2356778877332 22 255
Q ss_pred CeEEEEecC--------CCCCceEEEEecCCcEE-EEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEE
Q 036585 163 PLDIFSVGG--------DISDANVVKFSNDGRLM-LLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 233 (304)
Q Consensus 163 ~~~~~~~~~--------~~~~v~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 233 (304)
.+.+|++.. +...+..++|+|+++.+ ++++.++.|++||+.+++....+. +...+.+++|+|++++|
T Consensus 284 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l 359 (433)
T 3bws_A 284 RLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP----VFDKPNTIALSPDGKYL 359 (433)
T ss_dssp EEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE----CSSSEEEEEECTTSSEE
T ss_pred eEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec----CCCCCCeEEEcCCCCEE
Confidence 777887653 24567889999999755 556889999999999998887776 56778999999999988
Q ss_pred EEecC---------------CCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecC-c--eEEeccC
Q 036585 234 ISGSG---------------DGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSS-E--LSFWIPD 288 (304)
Q Consensus 234 ~~~~~---------------dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~-d--~~iw~~~ 288 (304)
++++. ||.|++||+.+++.+..+.. ...+.+++|+|++++|++++. | +++|+++
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 360 YVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 88765 57999999999998888875 457899999999999987764 5 9999875
No 108
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=223.75 Aligned_cols=243 Identities=14% Similarity=0.137 Sum_probs=201.7
Q ss_pred cceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeE
Q 036585 47 ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTV 126 (304)
Q Consensus 47 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 126 (304)
.+....+.+|...|.+++| |++++|++++. ||.|++||+.+++....+..|...|.+++|+|+++++++++.|+.+
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~---dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSR---DGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEET---TSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEc---CCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeE
Confidence 4677889999999999999 99999999998 9999999999999889999999999999999999999999999999
Q ss_pred EEEeCCcce---eeceEEEeccc--eeEecCCCeEEEecCCCeEEEE-------ecCCCCCceEEEEec-CCcEEEEeeC
Q 036585 127 LLWDQRAEK---CQGLLRVQGRP--AAAYDDQGLVFGYEKGPLDIFS-------VGGDISDANVVKFSN-DGRLMLLTTM 193 (304)
Q Consensus 127 ~iwd~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~~~~~~~-~~~~l~~~~~ 193 (304)
++|++.... ....+..+... .+.++++..+.+..++.+.+|+ +..|...+.+++|.| +++++++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 163 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFSENKFLTASA 163 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEETTTTEEEEEET
T ss_pred EEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEccCCCCEEEEEEC
Confidence 999987653 23333222222 3455555566677777777775 345888999999998 8999999999
Q ss_pred CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCc
Q 036585 194 EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSL 273 (304)
Q Consensus 194 dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 273 (304)
||.|++|| ..+....+.. .+...+.+++|+|++. +++++.||.|++||+++++++..+..|..+|++++|+|++
T Consensus 164 d~~i~i~d--~~~~~~~~~~--~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~- 237 (313)
T 3odt_A 164 DKTIKLWQ--NDKVIKTFSG--IHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG- 237 (313)
T ss_dssp TSCEEEEE--TTEEEEEECS--SCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-
T ss_pred CCCEEEEe--cCceEEEEec--cCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-
Confidence 99999999 4455555542 3788999999999998 8899999999999999999999999999999999999999
Q ss_pred EEEEecCc--eEEeccCCcc-ccccccCC
Q 036585 274 MFVTGSSE--LSFWIPDLSK-LGAYVGRN 299 (304)
Q Consensus 274 ~l~s~~~d--~~iw~~~~~~-~~~~~~~~ 299 (304)
.|++++.| +++|++...+ +..+..|.
T Consensus 238 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 266 (313)
T 3odt_A 238 DIVSCGEDRTVRIWSKENGSLKQVITLPA 266 (313)
T ss_dssp CEEEEETTSEEEEECTTTCCEEEEEECSS
T ss_pred CEEEEecCCEEEEEECCCCceeEEEeccC
Confidence 57778877 9999986554 34444444
No 109
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.2e-32 Score=224.66 Aligned_cols=254 Identities=13% Similarity=0.102 Sum_probs=207.9
Q ss_pred cEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEE-EEecCCCCCceEEEEccCceeeeecccccccEE
Q 036585 28 IYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVI-YSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVV 106 (304)
Q Consensus 28 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~ 106 (304)
.++++++.|+.|++||+.+++.+..+..|. .+.+++|+|+++.++ +++. |+.|++||+.+++.+..+..+. .+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~---d~~i~v~d~~~~~~~~~~~~~~-~v~ 77 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAH---SNDVSIIDTATNNVIATVPAGS-SPQ 77 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGG---GTEEEEEETTTTEEEEEEECSS-SEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCC---CCeEEEEECCCCeEEEEEECCC-Ccc
Confidence 467888999999999999999999888776 589999999999875 5545 9999999999999888887554 899
Q ss_pred EEEEcCCCCEEE-EcccCCeEEEEeCCcceeeceEEEecc-ceeEecCCCeE---EEecCCCeEEEEecC--------CC
Q 036585 107 LLSLCSSKDCFI-SGSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGLV---FGYEKGPLDIFSVGG--------DI 173 (304)
Q Consensus 107 ~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~--------~~ 173 (304)
+++|+|++++++ +++.++.|++||+++++....+..... ..+.+++++.. ....++.+.+|++.. ..
T Consensus 78 ~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~ 157 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG 157 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred ceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC
Confidence 999999999775 555679999999999888776664433 35678888742 344567788887643 23
Q ss_pred CCceEEEEecCCcEE-EEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec---CCCcEEEEecCC
Q 036585 174 SDANVVKFSNDGRLM-LLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS---GDGSVHAWSVRS 249 (304)
Q Consensus 174 ~~v~~~~~~~~~~~l-~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~dg~i~v~d~~~ 249 (304)
..+..++|+|+++.+ ++++.++.|++||+++++....+. +...+.+++|+|++++|++++ .++.|++||+++
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~----~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~ 233 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK----VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT 233 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE----CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe----cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC
Confidence 556899999999887 567788999999999998887776 456789999999999999887 689999999999
Q ss_pred CceeeeeeccCCCCceEEeCCCCcEE-EEecCc--eEEeccCCcc
Q 036585 250 GKEVASWMSFDTEPPVIKWAPGSLMF-VTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 250 ~~~~~~~~~~~~~i~~~~~~~~~~~l-~s~~~d--~~iw~~~~~~ 291 (304)
++.+..+..|. .+.+++|+|+++++ ++++.| +++|+.+..+
T Consensus 234 ~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 234 NKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp TEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred CeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 99888887664 57899999999877 565666 9999987544
No 110
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=227.79 Aligned_cols=235 Identities=12% Similarity=0.188 Sum_probs=189.0
Q ss_pred eeecccccceeEEEEccCCCeEEEEecC-CCCCceEEEEccCceeeeec-ccccccEEEEEEcCC---CCEEEEcccCCe
Q 036585 51 KTINSKKYGVDLVCFTSHPTTVIYSSKN-GWDESLRLLSLHDNKYSRYF-KGHHDRVVLLSLCSS---KDCFISGSLDRT 125 (304)
Q Consensus 51 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~~~dg~ 125 (304)
..+.+|...|.+++|+|++..+++++.. ..|+.|++||+.+++..... .+|..+|.+++|+|+ +++|++++.||.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~ 91 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGN 91 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSC
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCe
Confidence 3456799999999999999877665531 01899999999988765443 368999999999998 699999999999
Q ss_pred EEEEeCCcce-eeceEEEeccce--e------EecCCC--eEEEecCCCeEEEEecCCC--------------CCceEEE
Q 036585 126 VLLWDQRAEK-CQGLLRVQGRPA--A------AYDDQG--LVFGYEKGPLDIFSVGGDI--------------SDANVVK 180 (304)
Q Consensus 126 i~iwd~~~~~-~~~~~~~~~~~~--~------~~~~~~--~~~~~~~~~~~~~~~~~~~--------------~~v~~~~ 180 (304)
|++||+++++ ....+..+.... + ++++++ .+.+..++.+.+|++.... ..+.+++
T Consensus 92 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 92 LHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 9999999887 555554443332 2 234554 4556778899999876432 2677777
Q ss_pred ----EecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcC---CCcEEEEecCCCcEEEEecCCCcee
Q 036585 181 ----FSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP---EGMFVISGSGDGSVHAWSVRSGKEV 253 (304)
Q Consensus 181 ----~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~dg~i~v~d~~~~~~~ 253 (304)
|+|+++++++++.||.|++||+++++...... +...+.+++|+| ++++|++++.||.|++||+++++.+
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 247 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN----IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPT 247 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE----CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETT
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCceeeecC----CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcc
Confidence 78999999999999999999999988765544 788999999999 9999999999999999999887765
Q ss_pred eeee-----ccCCCCceEEeCCCCc-EEEEecCc--eEEeccCC
Q 036585 254 ASWM-----SFDTEPPVIKWAPGSL-MFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 254 ~~~~-----~~~~~i~~~~~~~~~~-~l~s~~~d--~~iw~~~~ 289 (304)
..+. +|...|++++|+|+++ +|++++.| +++|+++.
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 248 KGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp TEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred cceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 5554 8999999999999998 89999988 99999864
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.1e-33 Score=223.75 Aligned_cols=238 Identities=14% Similarity=0.165 Sum_probs=177.3
Q ss_pred EEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEE-EE
Q 036585 41 LYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCF-IS 119 (304)
Q Consensus 41 vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~ 119 (304)
+|++.+.+++..+..|...|.+++|+|++++|++++. + .+++|++.+++...... ...+..+++.++++.+ ++
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~---~-~~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 76 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTL---K-SFEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFV 76 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECS---S-EEEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEE
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcC---C-EEEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEE
Confidence 5667777777788899999999999999999999884 4 58899998877655433 2357778888888876 56
Q ss_pred cccCCeEEEEeCCcceeeceEEEecc-ceeEecCCCeEEEecCCCeEEEEecCCCC-------CceEEEEecCCcEEEE-
Q 036585 120 GSLDRTVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGLVFGYEKGPLDIFSVGGDIS-------DANVVKFSNDGRLMLL- 190 (304)
Q Consensus 120 ~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~v~~~~~~~~~~~l~~- 190 (304)
++.|++|++||+++++....+..... ..+.++++..++. .++.+.+|++..... ....+++++ .++++
T Consensus 77 ~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~ 153 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYS 153 (355)
T ss_dssp CSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEE
T ss_pred ECCccEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEe
Confidence 78889999999999988877764432 2455666665554 467899998875411 223455666 55555
Q ss_pred -eeCCCeEEEEEcCCCc----------------eeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCc-EEEEecCCCce
Q 036585 191 -TTMEGHIHVLDSFRGT----------------LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGS-VHAWSVRSGKE 252 (304)
Q Consensus 191 -~~~dg~i~~~d~~~~~----------------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~v~d~~~~~~ 252 (304)
|+.+|.|++||+++++ ....+. .|...|++++|+|++++|++|+.|++ |++||++++++
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~---~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~ 230 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK---AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL 230 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEEC---CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEE---ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 6899999999998765 144444 78999999999999999999999998 99999999999
Q ss_pred eeeee-c-cCCCCceEEeCCCCcEEEEecCc--eEEeccCCc
Q 036585 253 VASWM-S-FDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLS 290 (304)
Q Consensus 253 ~~~~~-~-~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~ 290 (304)
+..+. + |..+|++++|+|++++|++++.| +++|+++..
T Consensus 231 ~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 231 VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 99997 5 99999999999999999999999 999998654
No 112
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.5e-33 Score=227.93 Aligned_cols=242 Identities=14% Similarity=0.187 Sum_probs=190.5
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCc-eeeee
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN-KYSRY 97 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~-~~~~~ 97 (304)
..+.|+++|++||+|+.||.|++||+++++.+..+.+|...+.++++ ++..+++++. |+.+++||.... ..+..
T Consensus 151 ~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~---d~~i~~~d~~~~~~~~~~ 225 (420)
T 4gga_A 151 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSR---SGHIHHHDVRVAEHHVAT 225 (420)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEET---TSEEEEEETTSSSCEEEE
T ss_pred EEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeC---CCceeEeeecccceeeEE
Confidence 45889999999999999999999999999999999999999988877 5788999998 999999998864 45677
Q ss_pred cccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeece----EEEec--cceeEecCCC--eE-E--EecCCCeEE
Q 036585 98 FKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL----LRVQG--RPAAAYDDQG--LV-F--GYEKGPLDI 166 (304)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~--~~~~~~~~~~--~~-~--~~~~~~~~~ 166 (304)
+.+|...+..+.|+|+++++++++.|+.+++|+..+++.... ..... ...+.+.+.+ .+ . +..++.+++
T Consensus 226 ~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~i 305 (420)
T 4gga_A 226 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 305 (420)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEE
T ss_pred ecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEE
Confidence 889999999999999999999999999999999987654321 11111 2234555543 22 2 235678888
Q ss_pred EEecC--------CCCCceEEEEecCCcEEEEee--CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEe
Q 036585 167 FSVGG--------DISDANVVKFSNDGRLMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 236 (304)
Q Consensus 167 ~~~~~--------~~~~v~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 236 (304)
|++.. +...+.++.|+|+++.+++++ .|+.|++||+.+++++.++. +|...|++++|+|||++|++|
T Consensus 306 wd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~---gH~~~V~~l~~spdg~~l~S~ 382 (420)
T 4gga_A 306 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK---GHTSRVLSLTMSPDGATVASA 382 (420)
T ss_dssp EETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC---CCSSCEEEEEECTTSSCEEEE
T ss_pred EeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEc---CCCCCEEEEEEcCCCCEEEEE
Confidence 87653 456788999999999888765 78999999999999999887 799999999999999999999
Q ss_pred cCCCcEEEEecCCCceeeeeeccCCCCceEEe
Q 036585 237 SGDGSVHAWSVRSGKEVASWMSFDTEPPVIKW 268 (304)
Q Consensus 237 ~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~ 268 (304)
+.|++|+|||+.+..+......+...+....+
T Consensus 383 s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~ 414 (420)
T 4gga_A 383 AADETLRLWRCFELDPARRREREKASAAKSSL 414 (420)
T ss_dssp ETTTEEEEECCSCSSCC---------------
T ss_pred ecCCeEEEEECCCCCccchhhhccCCcccccc
Confidence 99999999999887766665555544443333
No 113
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5e-33 Score=229.58 Aligned_cols=211 Identities=16% Similarity=0.227 Sum_probs=177.2
Q ss_pred eeecccccceeEEEEccC-CCeEEEEecCCCCCceEEEEccC----------ceeeeecccccccEEEEEEcCCCC-EEE
Q 036585 51 KTINSKKYGVDLVCFTSH-PTTVIYSSKNGWDESLRLLSLHD----------NKYSRYFKGHHDRVVLLSLCSSKD-CFI 118 (304)
Q Consensus 51 ~~~~~~~~~v~~~~~~~~-~~~l~~~~~~~~d~~i~vwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 118 (304)
.....|.+.|.+++|+|+ +.++++++. ||.|++|++.+ .+....+.+|...|.+++|+|++. +|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~---dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTP---SSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECS---SSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECC---CCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence 445578899999999997 678888887 99999999987 567778889999999999999988 999
Q ss_pred EcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEec-CCcEEEEeeCCCeE
Q 036585 119 SGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSN-DGRLMLLTTMEGHI 197 (304)
Q Consensus 119 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i 197 (304)
+++.||.|++||++.+......... ...+..|...|.+++|+| ++.+|++++.||.|
T Consensus 199 s~~~dg~i~vwd~~~~~~~~~~~~~----------------------~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i 256 (430)
T 2xyi_A 199 SASDDHTICLWDINATPKEHRVIDA----------------------KNIFTGHTAVVEDVAWHLLHESLFGSVADDQKL 256 (430)
T ss_dssp EECTTSCEEEEETTSCCBGGGEEEC----------------------SEEECCCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEeCCCeEEEEeCCCCCCCCceecc----------------------ceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeE
Confidence 9999999999999874332111000 011235778999999999 67889999999999
Q ss_pred EEEEcCCC---ceeEEEEeCCCCCCcceEEEEcCCCc-EEEEecCCCcEEEEecCC-CceeeeeeccCCCCceEEeCCCC
Q 036585 198 HVLDSFRG---TLLSTYNVKPVSRNSTLEASFSPEGM-FVISGSGDGSVHAWSVRS-GKEVASWMSFDTEPPVIKWAPGS 272 (304)
Q Consensus 198 ~~~d~~~~---~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~v~d~~~-~~~~~~~~~~~~~i~~~~~~~~~ 272 (304)
++||++++ +....+. .|...+++++|+|++. ++++|+.||.|++||+++ .+++..+..|...|++++|+|++
T Consensus 257 ~i~d~~~~~~~~~~~~~~---~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~ 333 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTVD---AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHN 333 (430)
T ss_dssp EEEETTCSCSSSCSEEEE---CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSC
T ss_pred EEEECCCCCCCcceeEee---cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCC
Confidence 99999987 4666666 6889999999999887 688999999999999998 56688888999999999999998
Q ss_pred c-EEEEecCc--eEEeccCC
Q 036585 273 L-MFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 273 ~-~l~s~~~d--~~iw~~~~ 289 (304)
+ +|++++.| ++||++..
T Consensus 334 ~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 334 ETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TTEEEEEETTSCCEEEEGGG
T ss_pred CCEEEEEeCCCcEEEEeCCC
Confidence 5 68888888 99999875
No 114
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.5e-34 Score=232.82 Aligned_cols=221 Identities=15% Similarity=0.239 Sum_probs=191.0
Q ss_pred CCCeEEEEecCCcceeeeecccccceeEEEEcc-CCCeEEEEecCCCCCceEEEEccCceeeeecc-------------c
Q 036585 35 DDESIRLYDVTAATCLKTINSKKYGVDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNKYSRYFK-------------G 100 (304)
Q Consensus 35 ~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~-------------~ 100 (304)
.++.+++|+++.++....+.+|...|.+++|+| ++++|++++. ||.|++||+.+++....+. +
T Consensus 21 ~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
T 4a11_B 21 AESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGS---DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDV 97 (408)
T ss_dssp HHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEET---TSCEEEEECCCCSSSSCEEECEEEEECTTCTTC
T ss_pred ccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcC---CCeEEEEECCCCcccceEecccccccccccccc
Confidence 345688899988888889999999999999999 9999999998 9999999999876655443 5
Q ss_pred ccccEEEEEEcC-CCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEE
Q 036585 101 HHDRVVLLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVV 179 (304)
Q Consensus 101 ~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 179 (304)
|...|.+++|+| ++.+|++++.||.|++||+++++....+. +...+.++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~------------------------------~~~~~~~~ 147 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN------------------------------FEETVYSH 147 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE------------------------------CSSCEEEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc------------------------------CCCceeee
Confidence 899999999999 77899999999999999999887766554 33567888
Q ss_pred EEecC---CcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCc-EEEEecCCCcEEEEecCCCc-eee
Q 036585 180 KFSND---GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGSGDGSVHAWSVRSGK-EVA 254 (304)
Q Consensus 180 ~~~~~---~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~v~d~~~~~-~~~ 254 (304)
.++|. +.++++++.+|.|++||+++++....+. .|...|.+++|+|+++ +|++++.||.|++||+++++ .+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~ 224 (408)
T 4a11_B 148 HMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ---GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLI 224 (408)
T ss_dssp EECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC---CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSE
T ss_pred EeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec---CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccc
Confidence 88884 4599999999999999999998888877 6889999999999998 58899999999999998765 233
Q ss_pred ee---------------eccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc
Q 036585 255 SW---------------MSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 255 ~~---------------~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
.+ ..|...|.+++|+|++++|++++.| +++|++...+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 225 TLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp ECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCc
Confidence 33 5788999999999999999999988 9999987644
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-33 Score=230.18 Aligned_cols=221 Identities=11% Similarity=0.149 Sum_probs=178.2
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeeccccc-----ceeEEEEccCCCeEEEEecCCCCCceEEEEccC
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKY-----GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 91 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~ 91 (304)
....+.|+|+|++||+++.||.|++||.++ ++..+. |.. .+.+++|||+|++|++++. ||+|++||+.+
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~---DGtVkIWd~~~ 160 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE---DGELQFFSIRK 160 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET---TSEEEEEECCC
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcC---CCEEEEEECCC
Confidence 345689999999999999999999999654 666677 665 4999999999999999999 99999999998
Q ss_pred cee-------eeec----ccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeec---eEEEeccceeEecCCCeEE
Q 036585 92 NKY-------SRYF----KGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQG---LLRVQGRPAAAYDDQGLVF 157 (304)
Q Consensus 92 ~~~-------~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 157 (304)
++. +..+ .+|...|.+++|+|++ +++++.|+.|++||+..+.... .+.
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~---------------- 222 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ---------------- 222 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE----------------
T ss_pred CccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec----------------
Confidence 752 4555 6788899999999999 8888899999999998776321 121
Q ss_pred EecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEE--cCCCcEEEE
Q 036585 158 GYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF--SPEGMFVIS 235 (304)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~ 235 (304)
.+|...|.+++|+ |+.+++++ +++|++||+.+++...... +|...+..++| +|++..|++
T Consensus 223 ------------~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~---gh~~~V~~va~~~s~d~~~La~ 284 (588)
T 2j04_A 223 ------------NASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKT---GSLENFHIIPLNHEKESTILLM 284 (588)
T ss_dssp ------------CCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEEC---SCCSCCCEEEETTCSSCEEEEE
T ss_pred ------------ccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEc---CCCceEEEEEeeeCCCCCEEEE
Confidence 1466789999999 68888887 6999999998877644333 58899999999 999999999
Q ss_pred ecCCCcEEEEecCC------C-----------------ceeeeeeccCCCCceEEeCCCCcEEEEecCc
Q 036585 236 GSGDGSVHAWSVRS------G-----------------KEVASWMSFDTEPPVIKWAPGSLMFVTGSSE 281 (304)
Q Consensus 236 ~~~dg~i~v~d~~~------~-----------------~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d 281 (304)
+++||. ++|.... + +.+..+.+ ...|++++|+|||+.+|+++.=
T Consensus 285 a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SPdG~~lA~~~~i 351 (588)
T 2j04_A 285 SNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSPDGYSIAIVYDM 351 (588)
T ss_dssp CSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECTTSSEEEEEEEE
T ss_pred EcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECCCCCEEEEEEec
Confidence 999999 9998642 1 11122222 3458899999999999988753
No 116
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-33 Score=226.92 Aligned_cols=224 Identities=10% Similarity=0.071 Sum_probs=172.3
Q ss_pred EEEeeCCCeEEEEecC---------Ccceeeeec-ccccceeEEEEcc--CCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 30 LVTASDDESIRLYDVT---------AATCLKTIN-SKKYGVDLVCFTS--HPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 30 l~~~~~d~~i~vw~~~---------~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
+++++.|++|++|+.. +++.+..+. .|..+|.+++|+| +++++++++. |+.|++||+++++....
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~---dg~i~~wd~~~~~~~~~ 164 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADN---RGTIGFQSYEDDSQYIV 164 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEET---TCCEEEEESSSSCEEEE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeC---CCcEEEEECCCCcEEEE
Confidence 8999999999999765 444444443 5668899999999 9999999998 99999999999988766
Q ss_pred cc-cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceee-ceEEEeccceeEecCCCeEEEecCCCeEEEEecC-CCC
Q 036585 98 FK-GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQ-GLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGG-DIS 174 (304)
Q Consensus 98 ~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 174 (304)
.. .|...+.+++|+|++.+|++|+.||.|++||+++++.. ..+. . |..
T Consensus 165 ~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~-----------------------------~~h~~ 215 (343)
T 3lrv_A 165 HSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP-----------------------------VDEEA 215 (343)
T ss_dssp ECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC-----------------------------CCTTS
T ss_pred EecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe-----------------------------ccCCC
Confidence 54 35558999999999999999999999999999988754 3332 3 778
Q ss_pred CceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcc--eEEEEcCCCcEEEEecC-CCcEEEEecCCCc
Q 036585 175 DANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNST--LEASFSPEGMFVISGSG-DGSVHAWSVRSGK 251 (304)
Q Consensus 175 ~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i--~~~~~s~~~~~l~~~~~-dg~i~v~d~~~~~ 251 (304)
.|++++|+|++.+|++++ ++.|++||+++++....+.....+...+ .+++|+|++++|++++. |+.|++|++....
T Consensus 216 ~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 216 KIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp CEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 999999999999999999 5599999999987665544211222333 46999999999999888 9999999997655
Q ss_pred eeeeeeccCCCCceEEeCC---CCcEEEEecCc--eEEeccCCc
Q 036585 252 EVASWMSFDTEPPVIKWAP---GSLMFVTGSSE--LSFWIPDLS 290 (304)
Q Consensus 252 ~~~~~~~~~~~i~~~~~~~---~~~~l~s~~~d--~~iw~~~~~ 290 (304)
..... .++..++|+| +...+++++.| +.++.....
T Consensus 295 ~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~~~ 334 (343)
T 3lrv_A 295 KNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILKTND 334 (343)
T ss_dssp CSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEECSS
T ss_pred cceEe----cCceeEecCccccccceeEEEecCCceEEEEecCC
Confidence 43222 4566777887 77777777777 666554443
No 117
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.3e-33 Score=223.20 Aligned_cols=241 Identities=11% Similarity=0.065 Sum_probs=195.8
Q ss_pred eeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCce---eeeecccccccEEEEEEcCCCC-EEEEcccCCeE
Q 036585 51 KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK---YSRYFKGHHDRVVLLSLCSSKD-CFISGSLDRTV 126 (304)
Q Consensus 51 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i 126 (304)
....+|...|.+++|+|++++|++++. |+.|++|++.+++ ....+..|...|.+++|+|+++ +|++++.||.|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 81 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSW---DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI 81 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEET---TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcC---CCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeE
Confidence 345579999999999999999999998 9999999998876 3455567999999999999999 99999999999
Q ss_pred EEEeC-CcceeeceEEE--ec--cceeEecC-CCeEEEecCCCeEEEEecC-----------------CCCCceEEEEec
Q 036585 127 LLWDQ-RAEKCQGLLRV--QG--RPAAAYDD-QGLVFGYEKGPLDIFSVGG-----------------DISDANVVKFSN 183 (304)
Q Consensus 127 ~iwd~-~~~~~~~~~~~--~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----------------~~~~v~~~~~~~ 183 (304)
++||+ ++++.. .+.. +. ...+.+.+ +..+.+..++.+.+|++.. +...+.+++|+|
T Consensus 82 ~~wd~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 160 (342)
T 1yfq_A 82 LKVDLIGSPSFQ-ALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNS 160 (342)
T ss_dssp EEECSSSSSSEE-ECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECS
T ss_pred EEEEeccCCceE-eccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecC
Confidence 99999 776552 2222 22 22456665 3345577788899998654 557899999998
Q ss_pred CCcEEEEeeCCCeEEEEEcCC-CceeEEEEeCCCCCCcceEEEEcC-CCcEEEEecCCCcEEEEecCCC------ceeee
Q 036585 184 DGRLMLLTTMEGHIHVLDSFR-GTLLSTYNVKPVSRNSTLEASFSP-EGMFVISGSGDGSVHAWSVRSG------KEVAS 255 (304)
Q Consensus 184 ~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~v~d~~~~------~~~~~ 255 (304)
++ +++++.++.|++||+++ +......... .+...+.+++|+| +++++++++.||.|++|+++.. +....
T Consensus 161 ~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQWFRLPLCEDDNGTIEES-GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp SE--EEEEESTTEEEEEESSCCTTCCCEEEEC-SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred Cc--EEEEeCCCeEEEEECCccccccceeeec-CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 87 99999999999999988 5543222211 4778999999999 9999999999999999999876 77778
Q ss_pred eeccCC---------CCceEEeCCCCcEEEEecCc--eEEeccCCc-cccccccC
Q 036585 256 WMSFDT---------EPPVIKWAPGSLMFVTGSSE--LSFWIPDLS-KLGAYVGR 298 (304)
Q Consensus 256 ~~~~~~---------~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~-~~~~~~~~ 298 (304)
+..|.. +|.+++|+|++++|++++.| +++|++... .+..+.+|
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 292 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF 292 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCC
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcc
Confidence 877765 99999999999999999988 999999754 45666666
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=5.2e-33 Score=224.67 Aligned_cols=228 Identities=13% Similarity=0.164 Sum_probs=172.8
Q ss_pred EEecCCcceeeeecccccceeEEEEccC---CCeEEEEecCCCCCceEEEEccC-ceee-eecccccccEEEEEEcCCCC
Q 036585 41 LYDVTAATCLKTINSKKYGVDLVCFTSH---PTTVIYSSKNGWDESLRLLSLHD-NKYS-RYFKGHHDRVVLLSLCSSKD 115 (304)
Q Consensus 41 vw~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~d~~i~vwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~ 115 (304)
.|+....+.+..+.+|...|.+++|+|+ +++|++++. |+.|++||+.+ ++.+ ..+.+|...|.+++|+|+++
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~ 99 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSW---ANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGS 99 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEET---TSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECC---CCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCC
Confidence 3455667778889999999999999999 599999998 99999999997 5444 77888999999999999999
Q ss_pred EEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEE--ecCCcEEEEeeC
Q 036585 116 CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKF--SNDGRLMLLTTM 193 (304)
Q Consensus 116 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~ 193 (304)
+|++++.||.|++||+++++...... |...|.+++| +|++++|++++.
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~~~~~~~------------------------------~~~~v~~~~~~~~~~~~~l~~~~~ 149 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQAIQIAQ------------------------------HDAPVKTIHWIKAPNYSCVMTGSW 149 (368)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEE------------------------------CSSCEEEEEEEECSSCEEEEEEET
T ss_pred EEEEEcCCCcEEEEEcCCCCceeecc------------------------------ccCceEEEEEEeCCCCCEEEEccC
Confidence 99999999999999999887655332 4455566666 556666666666
Q ss_pred CCeEEEEEcCCCceeEEEEeC--------------------------------------CCCCCcceEEEEcCCCcE---
Q 036585 194 EGHIHVLDSFRGTLLSTYNVK--------------------------------------PVSRNSTLEASFSPEGMF--- 232 (304)
Q Consensus 194 dg~i~~~d~~~~~~~~~~~~~--------------------------------------~~~~~~i~~~~~s~~~~~--- 232 (304)
||.|++||+++++.+..+... ........++++.++...
T Consensus 150 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (368)
T 3mmy_A 150 DKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPT 229 (368)
T ss_dssp TSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEE
T ss_pred CCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCC
Confidence 666666666555544443311 112334455555554433
Q ss_pred -EEEecCCCcEEEEecCCC---ceeeeeeccCC------------CCceEEeCCCCcEEEEecCc--eEEeccCCc-ccc
Q 036585 233 -VISGSGDGSVHAWSVRSG---KEVASWMSFDT------------EPPVIKWAPGSLMFVTGSSE--LSFWIPDLS-KLG 293 (304)
Q Consensus 233 -l~~~~~dg~i~v~d~~~~---~~~~~~~~~~~------------~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~-~~~ 293 (304)
+++++.||.|++||++.. +.+..+..|.. +|++++|+|++++|++++.| +++|+++.. .+.
T Consensus 230 ~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~ 309 (368)
T 3mmy_A 230 GFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK 309 (368)
T ss_dssp EEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEE
T ss_pred eEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEE
Confidence 999999999999999887 45666777765 79999999999999999999 999999754 455
Q ss_pred ccccCCCC
Q 036585 294 AYVGRNRG 301 (304)
Q Consensus 294 ~~~~~~~g 301 (304)
.+.+|...
T Consensus 310 ~~~~~~~~ 317 (368)
T 3mmy_A 310 TSEQLDQP 317 (368)
T ss_dssp ECCCCSSC
T ss_pred EecCCCCC
Confidence 66665543
No 119
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.2e-33 Score=222.89 Aligned_cols=216 Identities=17% Similarity=0.229 Sum_probs=180.3
Q ss_pred eeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCc----eeeeecccccccEEEEEEcC--CCCEEEEcccCC
Q 036585 51 KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN----KYSRYFKGHHDRVVLLSLCS--SKDCFISGSLDR 124 (304)
Q Consensus 51 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg 124 (304)
..+.+|...|.+++|+|++++|++++. |+.|++||+.++ +....+.+|...|.+++|+| ++++|++++.||
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg 81 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSS---DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDK 81 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEET---TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeC---CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCC
Confidence 456789999999999999999999998 999999999876 46677788999999999999 689999999999
Q ss_pred eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecC--CcEEEEeeCCCeEEEEEc
Q 036585 125 TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSND--GRLMLLTTMEGHIHVLDS 202 (304)
Q Consensus 125 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~ 202 (304)
.|++||++++....... ....+..+..|...|.+++|+|+ +++|++++.||.|++||+
T Consensus 82 ~v~vwd~~~~~~~~~~~--------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~ 141 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGR--------------------RWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDA 141 (351)
T ss_dssp CEEEEEECTTSCTTSSC--------------------SEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEEC
T ss_pred eEEEEecCCCccccccc--------------------CcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecC
Confidence 99999998764321100 00112334468889999999999 999999999999999999
Q ss_pred CCCceeEEEEe----------CCCCCCcceEEEEcCC---CcEEEEecCCCcEEEEecCCCce--eeeeeccCCCCceEE
Q 036585 203 FRGTLLSTYNV----------KPVSRNSTLEASFSPE---GMFVISGSGDGSVHAWSVRSGKE--VASWMSFDTEPPVIK 267 (304)
Q Consensus 203 ~~~~~~~~~~~----------~~~~~~~i~~~~~s~~---~~~l~~~~~dg~i~v~d~~~~~~--~~~~~~~~~~i~~~~ 267 (304)
++++....+.. ...+...+.+++|+|+ +.++++++.++.+.+|+...++. +..+.+|...|++++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~ 221 (351)
T 3f3f_A 142 LEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSIS 221 (351)
T ss_dssp SSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEE
T ss_pred CChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEE
Confidence 88775544331 1246778999999997 89999999999998888877765 677788999999999
Q ss_pred eCCCC----cEEEEecCc--eEEeccCC
Q 036585 268 WAPGS----LMFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 268 ~~~~~----~~l~s~~~d--~~iw~~~~ 289 (304)
|+|++ ++|++++.| +++|++..
T Consensus 222 ~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 222 WAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp ECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred ECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 99998 899999998 99999865
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-33 Score=243.39 Aligned_cols=210 Identities=17% Similarity=0.276 Sum_probs=177.5
Q ss_pred eeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEcc--CceeeeecccccccEEEEEEcCC--CCEEEEcccCCe
Q 036585 50 LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DNKYSRYFKGHHDRVVLLSLCSS--KDCFISGSLDRT 125 (304)
Q Consensus 50 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~ 125 (304)
+..+.+|.+.|.+++|+|+++++++++. ||.|++||+. +++.+..+.+|.++|.+++|+|+ +++|++++.||.
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~---dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSS---DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEET---TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred eeecccCcceeEEEEECCCCCeEEEEEC---CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 3567899999999999999999999998 9999999998 55778888999999999999987 899999999999
Q ss_pred EEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecC--CcEEEEeeCCCeEEEEEcC
Q 036585 126 VLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSND--GRLMLLTTMEGHIHVLDSF 203 (304)
Q Consensus 126 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~~~d~~ 203 (304)
|++||+++++..... .+..|...|.+++|+|+ ++.+++++.||.|++||++
T Consensus 79 I~vwd~~~~~~~~~~---------------------------~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~ 131 (753)
T 3jro_A 79 VLIWKEENGRWSQIA---------------------------VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFK 131 (753)
T ss_dssp EEEEEEETTEEEEEE---------------------------EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECC
T ss_pred EEEEECCCCcccccc---------------------------cccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEee
Confidence 999999887532222 22357789999999999 9999999999999999998
Q ss_pred CCceeEEEEeCCCCCCcceEEEEcC-------------CCcEEEEecCCCcEEEEecCCC----ceeeeeeccCCCCceE
Q 036585 204 RGTLLSTYNVKPVSRNSTLEASFSP-------------EGMFVISGSGDGSVHAWSVRSG----KEVASWMSFDTEPPVI 266 (304)
Q Consensus 204 ~~~~~~~~~~~~~~~~~i~~~~~s~-------------~~~~l~~~~~dg~i~v~d~~~~----~~~~~~~~~~~~i~~~ 266 (304)
++......... .|...+.+++|+| +++++++|+.||.|++||++++ .....+.+|..+|+++
T Consensus 132 ~~~~~~~~~~~-~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l 210 (753)
T 3jro_A 132 ENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (753)
T ss_dssp SSSCCCCEEEE-CCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred cCCCcceeEee-cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEE
Confidence 87433322221 5888999999999 5899999999999999999877 4456778899999999
Q ss_pred EeCCC---CcEEEEecCc--eEEeccCCc
Q 036585 267 KWAPG---SLMFVTGSSE--LSFWIPDLS 290 (304)
Q Consensus 267 ~~~~~---~~~l~s~~~d--~~iw~~~~~ 290 (304)
+|+|+ +.+|++++.| +++|++...
T Consensus 211 ~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 211 AWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred EeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 99999 9999999999 999998765
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1.9e-31 Score=211.49 Aligned_cols=225 Identities=15% Similarity=0.203 Sum_probs=183.2
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCc-eeeee
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN-KYSRY 97 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~-~~~~~ 97 (304)
..+.+++++++|++|+.||+|++||+++++.+..+.+|...+.++. +++..+++++. ++.+++|+.... ..+..
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~--~~~~~l~s~~~---~~~~~~~~~~~~~~~~~~ 145 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLS--WNSYILSSGSR---SGHIHHHDVRVAEHHVAT 145 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE--EETTEEEEEET---TSEEEEEETTSSSCEEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEee--cCCCEEEEEec---CCceEeeecCCCceeEEE
Confidence 3578899999999999999999999999999999999988776654 46789999998 999999998875 45667
Q ss_pred cccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceE--EE--ec--cceeEecCCC--eE-E--EecCCCeEE
Q 036585 98 FKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL--RV--QG--RPAAAYDDQG--LV-F--GYEKGPLDI 166 (304)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~--~~--~~~~~~~~~~--~~-~--~~~~~~~~~ 166 (304)
+.+|...+..+.+.++++++++++.|+.|++||+++++..... .. .. .....+.+.. .+ . +..++.+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l 225 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 225 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEE
T ss_pred EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEE
Confidence 7889999999999999999999999999999999877643221 11 11 1123333332 11 1 234456777
Q ss_pred EEecC--------CCCCceEEEEecCCcEEEEee--CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEe
Q 036585 167 FSVGG--------DISDANVVKFSNDGRLMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 236 (304)
Q Consensus 167 ~~~~~--------~~~~v~~~~~~~~~~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 236 (304)
|+... +...+..+.|+|+++.+++++ .|+.|++||+++++.+.++. +|...|++++|+|++++|++|
T Consensus 226 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~---gH~~~V~~l~~spdg~~l~S~ 302 (318)
T 4ggc_A 226 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELK---GHTSRVLSLTMSPDGATVASA 302 (318)
T ss_dssp EETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEEC---CCSSCEEEEEECTTSSCEEEE
T ss_pred EecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEc---CCCCCEEEEEEcCCCCEEEEE
Confidence 76543 557788999999999887754 79999999999999999887 799999999999999999999
Q ss_pred cCCCcEEEEecCCCc
Q 036585 237 SGDGSVHAWSVRSGK 251 (304)
Q Consensus 237 ~~dg~i~v~d~~~~~ 251 (304)
+.||+|+|||+.+..
T Consensus 303 s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 303 AADETLRLWRCFELD 317 (318)
T ss_dssp ETTTEEEEECCSCCC
T ss_pred ecCCeEEEEECCCCC
Confidence 999999999997654
No 122
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.2e-31 Score=221.86 Aligned_cols=221 Identities=18% Similarity=0.348 Sum_probs=192.7
Q ss_pred cccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCc
Q 036585 54 NSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRA 133 (304)
Q Consensus 54 ~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 133 (304)
..|...|.++.+ +++.+++++. |+.|++||+.+++....+.+|...|.+++| +++++++|+.||.|++||+++
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~---dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~ 202 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLR---DNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNT 202 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEES---SSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSS
T ss_pred cCCCCcEEEEEE--CCCEEEEEeC---CCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCC
Confidence 345567888777 8999999998 999999999999999999999999999999 788999999999999999999
Q ss_pred ceeeceEEEeccc--eeEecCCCeEEEecCCCeEEEEec------------CCCCCceEEEEecCCcEEEEeeCCCeEEE
Q 036585 134 EKCQGLLRVQGRP--AAAYDDQGLVFGYEKGPLDIFSVG------------GDISDANVVKFSNDGRLMLLTTMEGHIHV 199 (304)
Q Consensus 134 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 199 (304)
++....+..+... .+.++++..+.+..++.+.+|++. +|...|.+++| +++++++++.||.|++
T Consensus 203 ~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 203 GEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 280 (435)
T ss_dssp CCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred CcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE
Confidence 9887776544433 455666667778888999998764 35677888888 7889999999999999
Q ss_pred EEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEec
Q 036585 200 LDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGS 279 (304)
Q Consensus 200 ~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~ 279 (304)
||+++++.+..+. .|...+.+++| +++++++|+.||.|++||+++++++..+.+|...|.+++| ++.+|++|+
T Consensus 281 wd~~~~~~~~~~~---~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~ 353 (435)
T 1p22_A 281 WNTSTCEFVRTLN---GHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA 353 (435)
T ss_dssp EETTTCCEEEEEE---CCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEE
T ss_pred EECCcCcEEEEEc---CCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEe
Confidence 9999999999988 68889999998 4679999999999999999999999999999999999999 788999999
Q ss_pred Cc--eEEeccCCc
Q 036585 280 SE--LSFWIPDLS 290 (304)
Q Consensus 280 ~d--~~iw~~~~~ 290 (304)
.| +++|++...
T Consensus 354 ~dg~i~vwd~~~~ 366 (435)
T 1p22_A 354 YDGKIKVWDLVAA 366 (435)
T ss_dssp TTSCEEEEEHHHH
T ss_pred CCCcEEEEECCCC
Confidence 98 999998543
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=9.6e-32 Score=208.18 Aligned_cols=196 Identities=8% Similarity=0.072 Sum_probs=152.5
Q ss_pred eEeecccCcEEEEee--CCCeEEEEec-CCcceeeeecccccceeEEEEcc---CCCeEEEEecCCCCCceEEEEccCce
Q 036585 20 ILQSMEVGIYLVTAS--DDESIRLYDV-TAATCLKTINSKKYGVDLVCFTS---HPTTVIYSSKNGWDESLRLLSLHDNK 93 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~--~d~~i~vw~~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~~~d~~i~vwd~~~~~ 93 (304)
.+...+.|+++.+++ .|+.|++|++ .+++.+..+.+|...+..++|+| ++..|++++. |++|+|||+.+++
T Consensus 138 ~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~---D~TIkIWDl~TGk 214 (356)
T 2w18_A 138 AVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTI---MNNIVIWNLKTGQ 214 (356)
T ss_dssp EEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEET---TSEEEEEETTTCC
T ss_pred EEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecC---CCcEEEEECCCCc
Confidence 333445566666543 5999999999 55888888899999999999999 7799999998 9999999999999
Q ss_pred eeeeccccc---ccEEEEEEcCCCCEE------------EEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEE
Q 036585 94 YSRYFKGHH---DRVVLLSLCSSKDCF------------ISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFG 158 (304)
Q Consensus 94 ~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (304)
.++++.+|. ..+.+++|+|++.++ ++|+.|++|++||..+++....+.... +
T Consensus 215 ~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~-------p------ 281 (356)
T 2w18_A 215 LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL-------P------ 281 (356)
T ss_dssp EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC-------C------
T ss_pred EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec-------c------
Confidence 999998654 367788999999876 567889999999999888765442110 0
Q ss_pred ecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcce-EEEEcCCCcEEEEec
Q 036585 159 YEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTL-EASFSPEGMFVISGS 237 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~ 237 (304)
.+|...+. ..+.++.++++++.|++|++||+.+++.+.++. +|...+. .++|+|||++|++|+
T Consensus 282 -----------~Gh~~~~l--sg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~---gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 282 -----------PGQAGRFL--EGDVKDHCAAAILTSGTIAIWDLLLGQCTALLP---PVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp -----------TTCCCCEE--EEEEETTEEEEEETTSCEEEEETTTCSEEEEEC---CC--CCCCEEEECSSSSEEEEEC
T ss_pred -----------CCCcceeE--ccccCCCEEEEEcCCCcEEEEECCCCcEEEEec---CCCCCeEEEEEECCCCCEEEEEE
Confidence 13333333 334448889999999999999999999999987 5665544 689999999999999
Q ss_pred CCCcEEEEec
Q 036585 238 GDGSVHAWSV 247 (304)
Q Consensus 238 ~dg~i~v~d~ 247 (304)
.|++|+|||+
T Consensus 346 ~D~TIklWd~ 355 (356)
T 2w18_A 346 KDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEEE
T ss_pred CCCcEEEecC
Confidence 9999999996
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=8.4e-30 Score=207.84 Aligned_cols=236 Identities=11% Similarity=0.125 Sum_probs=192.8
Q ss_pred eeeEeecccCcEE-EEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 18 EEILQSMEVGIYL-VTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 18 ~~~i~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
...+.++++|+++ ++++.|+.|++||+.+++.+..+..+. .+.+++|+|+++++++++.. ++.|++||+.+++.+.
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~--~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMA--SSTLSVIDTTSNTVAG 110 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEE
T ss_pred cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECC--CCEEEEEECCCCeEEE
Confidence 3457889999876 677789999999999999988888766 89999999999988766642 7999999999999888
Q ss_pred ecccccccEEEEEEcCCCCEE-EEcccCCeEEEEeCCcceeeceEEEec-cceeEecCCCeEE---EecCCCeEEEEecC
Q 036585 97 YFKGHHDRVVLLSLCSSKDCF-ISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGLVF---GYEKGPLDIFSVGG 171 (304)
Q Consensus 97 ~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 171 (304)
.+.. ...+.+++|+|+++.+ ++++.++.|++||+++++....+.... ...+.+++++..+ ...++.+.+|++..
T Consensus 111 ~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~ 189 (391)
T 1l0q_A 111 TVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT 189 (391)
T ss_dssp EEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 7774 4568999999999977 688889999999999988877766433 3356788887432 34566788887653
Q ss_pred --------CCCCceEEEEecCCcEEEEee---CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEE-EEecCC
Q 036585 172 --------DISDANVVKFSNDGRLMLLTT---MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV-ISGSGD 239 (304)
Q Consensus 172 --------~~~~v~~~~~~~~~~~l~~~~---~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~d 239 (304)
+...+.+++|+|+++++++++ .++.|++||+++++.+..+. . ...+.+++|+|++++| ++++.|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~---~-~~~~~~~~~s~dg~~l~~s~~~d 265 (391)
T 1l0q_A 190 NSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP---V-GPDPAGIAVTPDGKKVYVALSFX 265 (391)
T ss_dssp TEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE---C-CSSEEEEEECTTSSEEEEEETTT
T ss_pred CeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe---c-CCCccEEEEccCCCEEEEEcCCC
Confidence 345678999999999999888 68999999999999888877 2 3457889999999887 566889
Q ss_pred CcEEEEecCCCceeeeeeccCC
Q 036585 240 GSVHAWSVRSGKEVASWMSFDT 261 (304)
Q Consensus 240 g~i~v~d~~~~~~~~~~~~~~~ 261 (304)
+.|++||+.+++.+..+..|..
T Consensus 266 ~~v~v~d~~~~~~~~~~~~~~~ 287 (391)
T 1l0q_A 266 NTVSVIDTATNTITATMAVGKN 287 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSSS
T ss_pred CEEEEEECCCCcEEEEEECCcC
Confidence 9999999999988887765544
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.98 E-value=3.3e-30 Score=211.39 Aligned_cols=236 Identities=11% Similarity=0.077 Sum_probs=183.6
Q ss_pred CcEEEEeeCC------CeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccc
Q 036585 27 GIYLVTASDD------ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKG 100 (304)
Q Consensus 27 ~~~l~~~~~d------~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 100 (304)
+..++.++.+ +.|++||+. +.....+..|...+.+++|+|+++.|++++..+.+..|++||+.+++.. .+..
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~ 220 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVAS 220 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEEC
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eeec
Confidence 6667766654 799999997 4556778889999999999999999999987211249999999998765 4566
Q ss_pred ccccEEEEEEcCCCCEEE-EcccCC--eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCce
Q 036585 101 HHDRVVLLSLCSSKDCFI-SGSLDR--TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDAN 177 (304)
Q Consensus 101 ~~~~v~~~~~~~~~~~l~-~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 177 (304)
|...+.+++|+|+++.|+ +++.++ .|++||+++++.... ..+...+.
T Consensus 221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l------------------------------~~~~~~~~ 270 (415)
T 2hqs_A 221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV------------------------------TDGRSNNT 270 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEC------------------------------CCCSSCEE
T ss_pred CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeC------------------------------cCCCCccc
Confidence 888999999999999877 666555 499999987654221 13556788
Q ss_pred EEEEecCCcEEEEeeC-CC--eEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC---CcEEEEecCCCc
Q 036585 178 VVKFSNDGRLMLLTTM-EG--HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD---GSVHAWSVRSGK 251 (304)
Q Consensus 178 ~~~~~~~~~~l~~~~~-dg--~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~i~v~d~~~~~ 251 (304)
+++|+|+|++|++++. ++ .|++||+.+++.. .+. .+...+..++|+|+|++|++++.+ ..|++||+.+++
T Consensus 271 ~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~---~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 271 EPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RIT---WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp EEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECC---CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC
T ss_pred ceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEe---cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC
Confidence 9999999999988876 44 7888898887643 222 356688899999999999988754 589999999887
Q ss_pred eeeeeeccCCCCceEEeCCCCcEEEEecCc-----eEEeccCCccccccccCCC
Q 036585 252 EVASWMSFDTEPPVIKWAPGSLMFVTGSSE-----LSFWIPDLSKLGAYVGRNR 300 (304)
Q Consensus 252 ~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-----~~iw~~~~~~~~~~~~~~~ 300 (304)
.. .+..+. .+.+++|+|+|++|++++.+ +.+|+++.+....+.+++.
T Consensus 347 ~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~ 398 (415)
T 2hqs_A 347 VQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDG 398 (415)
T ss_dssp EE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSS
T ss_pred EE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCC
Confidence 63 455554 89999999999999888765 5666777777777766654
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=4.3e-31 Score=215.40 Aligned_cols=205 Identities=12% Similarity=0.072 Sum_probs=141.6
Q ss_pred EEccCCCeEEEEecCCCCCceEEEEccCcee-----eeecccccccEEEEEEcC--------CCCEEEEcccCCeEEEEe
Q 036585 64 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-----SRYFKGHHDRVVLLSLCS--------SKDCFISGSLDRTVLLWD 130 (304)
Q Consensus 64 ~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg~i~iwd 130 (304)
.+++++..+++++. |++|++||..+++. +..+.+|.+.|.+++|+| ++++|++++.|++|++||
T Consensus 96 ~~~~~~~~las~~~---d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 96 SSPVYSLFLACVCQ---DNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR 172 (393)
T ss_dssp -CCEEEEEEEEEET---TSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE
T ss_pred ecCCCCCEEEEEeC---CCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEE
Confidence 33445667889988 99999999988754 345789999999999997 788999999999999999
Q ss_pred CCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCc-EEEEeeCCCeEEEEEcCCCceeE
Q 036585 131 QRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGTLLS 209 (304)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~ 209 (304)
++++.....+. .|...+.+++|+|++. +|++++.||+|++||+++++...
T Consensus 173 ~~~~~~~~~~~-----------------------------~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~ 223 (393)
T 4gq1_A 173 LTDEGPILAGY-----------------------------PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAE 223 (393)
T ss_dssp EETTEEEEEEE-----------------------------ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---
T ss_pred CCCCceeeeec-----------------------------CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccc
Confidence 98776544433 4667899999999874 79999999999999998876544
Q ss_pred EEEe----------------------CCCCCCcceEEEEc-CCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceE
Q 036585 210 TYNV----------------------KPVSRNSTLEASFS-PEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVI 266 (304)
Q Consensus 210 ~~~~----------------------~~~~~~~i~~~~~s-~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 266 (304)
.... ...+...+.++.|+ |+++.|++++.|+.+++||+..++....+..|...+..+
T Consensus 224 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~ 303 (393)
T 4gq1_A 224 ENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPK 303 (393)
T ss_dssp -------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------
T ss_pred cccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccE
Confidence 3321 12456778888887 799999999999999999998877665555554443333
Q ss_pred ------------------EeCC--CCcEEEEecCc--eEEeccCCcc-ccccccCCC
Q 036585 267 ------------------KWAP--GSLMFVTGSSE--LSFWIPDLSK-LGAYVGRNR 300 (304)
Q Consensus 267 ------------------~~~~--~~~~l~s~~~d--~~iw~~~~~~-~~~~~~~~~ 300 (304)
.|+| ++.++++|+.| ++||+..... .....+|+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~ 360 (393)
T 4gq1_A 304 NLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGM 360 (393)
T ss_dssp CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSS
T ss_pred EEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCC
Confidence 3333 34567778877 9999986544 333444443
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=1.7e-28 Score=207.18 Aligned_cols=264 Identities=15% Similarity=0.138 Sum_probs=206.7
Q ss_pred eecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEc--cCceeeeecc
Q 036585 22 QSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL--HDNKYSRYFK 99 (304)
Q Consensus 22 ~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~--~~~~~~~~~~ 99 (304)
.+++++.++++++.|++|.+||..+++++.++..+.. +..++|+|++++|++++. |+.|++||+ .+++.+..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~---d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGR---DARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEET---TSEEEEEETTSSSCEEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECC---CCeEEEEECcCCCCcEEEEEe
Confidence 4677899999999999999999999999999884433 889999999999999998 999999999 8888888887
Q ss_pred cccccEEEEEEcC----CCCEEEEccc-CCeEEEEeCCcceeeceEEEec-------------cceeEecCCCe-EE--E
Q 036585 100 GHHDRVVLLSLCS----SKDCFISGSL-DRTVLLWDQRAEKCQGLLRVQG-------------RPAAAYDDQGL-VF--G 158 (304)
Q Consensus 100 ~~~~~v~~~~~~~----~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~-------------~~~~~~~~~~~-~~--~ 158 (304)
+...+..++|+| +++++++++. +++|.+||..+.+.+..+...+ ...+.+++++. ++ .
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 455679999999 9999998874 8999999999988887765421 12345565442 22 2
Q ss_pred ecCCCeEEEEecC----------CCCCceEEEEecCCcEEEEee-CCCeEEEEEcCCCceeEEEEeCC-CCCCcceEEEE
Q 036585 159 YEKGPLDIFSVGG----------DISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKP-VSRNSTLEASF 226 (304)
Q Consensus 159 ~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~-~~~~~i~~~~~ 226 (304)
..++.+.+++... +...+..+.|+|+|+++++++ .+++|.+||+.++++...+.... .|.+....+ +
T Consensus 299 ~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~ 377 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-V 377 (543)
T ss_dssp TTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-E
T ss_pred CCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-C
Confidence 3345566665432 234567799999999877655 58899999999999988887321 133333333 4
Q ss_pred cCC-CcEEEEec-CCCcEEEEecCC-------CceeeeeeccCCCCceEEeCCCCcEEEEec--------Cc-eEEeccC
Q 036585 227 SPE-GMFVISGS-GDGSVHAWSVRS-------GKEVASWMSFDTEPPVIKWAPGSLMFVTGS--------SE-LSFWIPD 288 (304)
Q Consensus 227 s~~-~~~l~~~~-~dg~i~v~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~--------~d-~~iw~~~ 288 (304)
+|+ +..++++. .|++|.+||+.+ .+.++++..|...+..++|+|++++|++++ .+ |.+|+.+
T Consensus 378 ~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~ 457 (543)
T 1nir_A 378 HPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLK 457 (543)
T ss_dssp ETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETT
T ss_pred CCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECC
Confidence 777 66666665 689999999988 888999999998999999999999999987 33 9999987
Q ss_pred Ccc
Q 036585 289 LSK 291 (304)
Q Consensus 289 ~~~ 291 (304)
..+
T Consensus 458 ~~~ 460 (543)
T 1nir_A 458 NLD 460 (543)
T ss_dssp CTT
T ss_pred CCC
Confidence 544
No 128
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=6.8e-28 Score=192.17 Aligned_cols=264 Identities=12% Similarity=0.082 Sum_probs=199.5
Q ss_pred CcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee-eeecccccccE
Q 036585 27 GIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-SRYFKGHHDRV 105 (304)
Q Consensus 27 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~v 105 (304)
+..+++.+.++.|++||..+++.+..+..+...+ .++|+|+++++++++.. ++.|.+||+.+++. ...+..+..+.
T Consensus 10 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~ 86 (331)
T 3u4y_A 10 NFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF--CQTLVQIETQLEPPKVVAIQEGQSSM 86 (331)
T ss_dssp CEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST--TCEEEEEECSSSSCEEEEEEECSSCC
T ss_pred CEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC--CCeEEEEECCCCceeEEecccCCCCc
Confidence 4557788889999999999999988887766667 99999999987777653 78999999999887 66676666666
Q ss_pred EEEEEcCCCCEEEEcccCC---eEEEEeCCcceeeceEEEecc-ceeEecCCCe-EE-E-ecCCC-eEEEEecC------
Q 036585 106 VLLSLCSSKDCFISGSLDR---TVLLWDQRAEKCQGLLRVQGR-PAAAYDDQGL-VF-G-YEKGP-LDIFSVGG------ 171 (304)
Q Consensus 106 ~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~-~~-~-~~~~~-~~~~~~~~------ 171 (304)
.+++|+|++++++++..++ .|.+||+++++....+..... ..+.+++++. ++ . ...+. +.+|++..
T Consensus 87 ~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~ 166 (331)
T 3u4y_A 87 ADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFD 166 (331)
T ss_dssp CCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEE
T ss_pred cceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEee
Confidence 5599999999998666553 899999999888776655333 4578888874 33 3 33466 78777542
Q ss_pred -------CCCCceEEEEecCCcEEEEe-eCCCeEEEEEcCCCce---eEEEEeCCCCCCcceEEEEcCCCcEEEEec-CC
Q 036585 172 -------DISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTL---LSTYNVKPVSRNSTLEASFSPEGMFVISGS-GD 239 (304)
Q Consensus 172 -------~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~---~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~d 239 (304)
.......++|+|+|++++++ ..++.|++||+.+++. +..+. ....+..++|+|||++|++++ .+
T Consensus 167 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~----~~~~~~~~~~spdg~~l~v~~~~~ 242 (331)
T 3u4y_A 167 TGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG----TNNLPGTIVVSRDGSTVYVLTEST 242 (331)
T ss_dssp EEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE----CSSCCCCEEECTTSSEEEEECSSE
T ss_pred cCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc----CCCCCceEEECCCCCEEEEEEcCC
Confidence 22456789999999966555 4689999999999888 66665 346677899999999776654 57
Q ss_pred CcEEEEecCCCce--eeeeecc----CC---CCceEEeCCCCcEEEEecCc---eEEeccCCcccccccc
Q 036585 240 GSVHAWSVRSGKE--VASWMSF----DT---EPPVIKWAPGSLMFVTGSSE---LSFWIPDLSKLGAYVG 297 (304)
Q Consensus 240 g~i~v~d~~~~~~--~~~~~~~----~~---~i~~~~~~~~~~~l~s~~~d---~~iw~~~~~~~~~~~~ 297 (304)
+.|.+||+.+++. +..+..+ .. ....++|+|++++|++++.+ +.+|+++...+....+
T Consensus 243 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~ 312 (331)
T 3u4y_A 243 VDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVAG 312 (331)
T ss_dssp EEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECTT
T ss_pred CEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccceec
Confidence 7899999998876 3333222 22 23558999999988766654 8999998776654433
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=2.2e-27 Score=196.11 Aligned_cols=223 Identities=11% Similarity=0.146 Sum_probs=185.3
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecc
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFK 99 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~ 99 (304)
.+.+.++++++++++.|+.|++||+++++.+..+..|...+.+++|+|+++.+++++.. |+.|++||+.+++.+..+.
T Consensus 174 ~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~d~~~~~~~~~~~ 251 (433)
T 3bws_A 174 TISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI--SEDISVIDRKTKLEIRKTD 251 (433)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT--TTEEEEEETTTTEEEEECC
T ss_pred EEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC--CCcEEEEECCCCcEEEEec
Confidence 36778899999999999999999999999999998898999999999999988666532 8999999999998888877
Q ss_pred cccccEEEEEEcCCCCEEEEcc--------cCCeEEEEeCCcceeeceEEEe-ccceeEecCCCe-E-E-EecCCCeEEE
Q 036585 100 GHHDRVVLLSLCSSKDCFISGS--------LDRTVLLWDQRAEKCQGLLRVQ-GRPAAAYDDQGL-V-F-GYEKGPLDIF 167 (304)
Q Consensus 100 ~~~~~v~~~~~~~~~~~l~~~~--------~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~-~-~-~~~~~~~~~~ 167 (304)
.+ ..+.+++|+|+++++++++ .|+.|++||+++++....+... ....+.+++++. + + ...++.+.+|
T Consensus 252 ~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~ 330 (433)
T 3bws_A 252 KI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVY 330 (433)
T ss_dssp CC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred CC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEE
Confidence 54 5689999999999999887 4889999999988877666433 333567888773 3 2 3566778888
Q ss_pred EecC--------CCCCceEEEEecCCcEEEEeeC---------------CCeEEEEEcCCCceeEEEEeCCCCCCcceEE
Q 036585 168 SVGG--------DISDANVVKFSNDGRLMLLTTM---------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 224 (304)
Q Consensus 168 ~~~~--------~~~~v~~~~~~~~~~~l~~~~~---------------dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~ 224 (304)
++.. +...+.+++|+|+++++++++. ||.|++||+.+++.+..+. ....+.++
T Consensus 331 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~----~~~~~~~~ 406 (433)
T 3bws_A 331 DLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE----AGNQPTGL 406 (433)
T ss_dssp ETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE----CSSSEEEE
T ss_pred ECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec----CCCCCceE
Confidence 7653 4467889999999998888876 5799999999999888887 35678999
Q ss_pred EEcCCCcEEEEec-CCCcEEEEecCC
Q 036585 225 SFSPEGMFVISGS-GDGSVHAWSVRS 249 (304)
Q Consensus 225 ~~s~~~~~l~~~~-~dg~i~v~d~~~ 249 (304)
+|+|++++|++++ .|+.|++|++..
T Consensus 407 ~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 407 DVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EECTTSCEEEEEETTTTEEEEEEETT
T ss_pred EEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9999999998876 499999999864
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.7e-28 Score=201.29 Aligned_cols=241 Identities=13% Similarity=0.107 Sum_probs=183.4
Q ss_pred EeecccC-cEEEEee----CCC----eEEEEec--CCccee--eeecccccceeEEEEcc--------------CCCeEE
Q 036585 21 LQSMEVG-IYLVTAS----DDE----SIRLYDV--TAATCL--KTINSKKYGVDLVCFTS--------------HPTTVI 73 (304)
Q Consensus 21 i~~~~~~-~~l~~~~----~d~----~i~vw~~--~~~~~~--~~~~~~~~~v~~~~~~~--------------~~~~l~ 73 (304)
..|.+.| +++++|+ .|| .+++||+ .+++.+ ..+.+|...+..+++++ .+..++
T Consensus 68 ~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~ 147 (415)
T 2hqs_A 68 AAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIA 147 (415)
T ss_dssp HHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEE
T ss_pred HHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEE
Confidence 3445555 4666776 467 8999999 888877 55888888888877765 166777
Q ss_pred EEecCCCC---CceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCC---eEEEEeCCcceeeceEEEeccce
Q 036585 74 YSSKNGWD---ESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDR---TVLLWDQRAEKCQGLLRVQGRPA 147 (304)
Q Consensus 74 ~~~~~~~d---~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~~ 147 (304)
+++....+ +.|++||+.. .....+..|...+.+++|+|++++|++++.++ .|++||+++++.....
T Consensus 148 ~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~------- 219 (415)
T 2hqs_A 148 YVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA------- 219 (415)
T ss_dssp EEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE-------
T ss_pred EEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee-------
Confidence 76652112 7999999974 45677778999999999999999999998875 9999999987654221
Q ss_pred eEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEE-EeeCCC--eEEEEEcCCCceeEEEEeCCCCCCcceEE
Q 036585 148 AAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLML-LTTMEG--HIHVLDSFRGTLLSTYNVKPVSRNSTLEA 224 (304)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~~~i~~~ 224 (304)
.+...+.+++|+|||+.|+ +++.++ .|++||+.+++.. .+. .+...+.++
T Consensus 220 -----------------------~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~---~~~~~~~~~ 272 (415)
T 2hqs_A 220 -----------------------SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVT---DGRSNNTEP 272 (415)
T ss_dssp -----------------------CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECC---CCSSCEEEE
T ss_pred -----------------------cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCc---CCCCcccce
Confidence 3445788999999999888 555555 4999999887753 333 467789999
Q ss_pred EEcCCCcEEEEecC-CC--cEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc-----eEEeccCCccccccc
Q 036585 225 SFSPEGMFVISGSG-DG--SVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE-----LSFWIPDLSKLGAYV 296 (304)
Q Consensus 225 ~~s~~~~~l~~~~~-dg--~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-----~~iw~~~~~~~~~~~ 296 (304)
+|+|||++|++++. ++ .|++||+.+++. ..+..+...+.+++|+|+|++|++++.+ +.+|+.+..+...+.
T Consensus 273 ~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~ 351 (415)
T 2hqs_A 273 TWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLS 351 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECC
T ss_pred EECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEec
Confidence 99999999888775 44 678889887764 4455577788899999999999888753 788888776665544
Q ss_pred c
Q 036585 297 G 297 (304)
Q Consensus 297 ~ 297 (304)
.
T Consensus 352 ~ 352 (415)
T 2hqs_A 352 S 352 (415)
T ss_dssp C
T ss_pred C
Confidence 3
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=5.7e-28 Score=212.55 Aligned_cols=265 Identities=11% Similarity=0.039 Sum_probs=199.5
Q ss_pred eeeEeecccCcEEEEeeC-CC-----eEEEEecCCcceeeeeccccc------------------------ceeEEEEcc
Q 036585 18 EEILQSMEVGIYLVTASD-DE-----SIRLYDVTAATCLKTINSKKY------------------------GVDLVCFTS 67 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~-d~-----~i~vw~~~~~~~~~~~~~~~~------------------------~v~~~~~~~ 67 (304)
...+.++|||++|++++. |+ .|++||+.+++....+..+.. .+.+++|+|
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp 118 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP 118 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence 456899999999999998 88 899999999887776665432 388999999
Q ss_pred CCCeEEEEecCCCCCceEEEEccCce--eeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEec-
Q 036585 68 HPTTVIYSSKNGWDESLRLLSLHDNK--YSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG- 144 (304)
Q Consensus 68 ~~~~l~~~~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~- 144 (304)
|+++|++++ ++.|++||+.+++ ....+..|...+..++|+|||++|++++ ++.|++||+.+++.........
T Consensus 119 Dg~~l~~~~----~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 119 DAQRLLFPL----GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp TSSEEEEEE----TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred CCCEEEEEe----CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 999999998 6899999999883 4455667888899999999999999887 4699999998876654433222
Q ss_pred -----------------cceeEecCCCeEE--EecCC---------------------------------CeEEEEecC-
Q 036585 145 -----------------RPAAAYDDQGLVF--GYEKG---------------------------------PLDIFSVGG- 171 (304)
Q Consensus 145 -----------------~~~~~~~~~~~~~--~~~~~---------------------------------~~~~~~~~~- 171 (304)
...+.++|++..+ ...++ .+.++++..
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 2457888888533 22221 344455433
Q ss_pred -----------CCCCceEEEEecCCcEEEEeeC-----CCeEEEEEcCCCceeEEEEeCCC-CCCcceEEEEcCCCcEEE
Q 036585 172 -----------DISDANVVKFSNDGRLMLLTTM-----EGHIHVLDSFRGTLLSTYNVKPV-SRNSTLEASFSPEGMFVI 234 (304)
Q Consensus 172 -----------~~~~v~~~~~~~~~~~l~~~~~-----dg~i~~~d~~~~~~~~~~~~~~~-~~~~i~~~~~s~~~~~l~ 234 (304)
+...+..++| |||++|++++. +..|++||+.+++....+..... ....+..++|+|||++++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~ 352 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILW 352 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEE
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEE
Confidence 3345678999 99999987654 56899999999987776653211 001456789999999999
Q ss_pred EecCCCcEEEEecC-CCceeeeeeccCCCCceE-EeCCCCcEEEE-ecCc----eEEeccCC
Q 036585 235 SGSGDGSVHAWSVR-SGKEVASWMSFDTEPPVI-KWAPGSLMFVT-GSSE----LSFWIPDL 289 (304)
Q Consensus 235 ~~~~dg~i~v~d~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~l~s-~~~d----~~iw~~~~ 289 (304)
+++.||.++||.+. +++ ...+..|...+..+ .|+|+++.|+. ++.+ ++||.++.
T Consensus 353 ~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 353 SSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp EECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred EecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 99999988888765 445 67777788888887 59999987754 4433 78998754
No 132
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=6.9e-28 Score=188.75 Aligned_cols=242 Identities=14% Similarity=0.118 Sum_probs=181.6
Q ss_pred EeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC-ceeeeecccc-cccEEEEE
Q 036585 32 TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYSRYFKGH-HDRVVLLS 109 (304)
Q Consensus 32 ~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~-~~~~~~~~~~-~~~v~~~~ 109 (304)
.++.|+.|++||+.+++.. .+..|...+.+++|+|++++|++++ ++.|++||+.+ ++.......+ ...+.+++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 91 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS----EGLLYRLSLAGDPSPEKVDTGFATICNNDHG 91 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE----TTEEEEEESSSCCSCEECCCTTCCCBCSCCE
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc----CCeEEEEeCCCCCCceEeccccccccccceE
Confidence 4467899999999988765 4556888999999999999999986 88999999999 8777666655 36789999
Q ss_pred EcCCCCEEEEcc--cCC--eEEEEeCCcceeeceEEEeccceeEecCCCeEE---EecCCCeEEEEec----------CC
Q 036585 110 LCSSKDCFISGS--LDR--TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVF---GYEKGPLDIFSVG----------GD 172 (304)
Q Consensus 110 ~~~~~~~l~~~~--~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~----------~~ 172 (304)
|+|++++|++++ .++ .|..|++.++.............+.+++++..+ ...++.+.+|.+. .+
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 171 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHG 171 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCS
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccC
Confidence 999999999988 334 444455554443222112223345788887433 3445667777653 24
Q ss_pred CCCceEEEEecCCcEEEEee-CCCeEEEEEcC-CCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC-----------
Q 036585 173 ISDANVVKFSNDGRLMLLTT-MEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD----------- 239 (304)
Q Consensus 173 ~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----------- 239 (304)
...+.+++|+|+++++++++ .++.+++|++. .+.....+. .+...+..++|+|++++|++++.+
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 248 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT---DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLD 248 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC---CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEE
T ss_pred CCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe---cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCc
Confidence 46788999999999888766 58899999886 444444444 466788899999999999888765
Q ss_pred CcEEEEecCCCce--eeeeeccCCCCceEEeCCCCcEEEEecCc
Q 036585 240 GSVHAWSVRSGKE--VASWMSFDTEPPVIKWAPGSLMFVTGSSE 281 (304)
Q Consensus 240 g~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~s~~~d 281 (304)
+.|++||+.+++. +..+.+|...+.+++|+|++++|++++.+
T Consensus 249 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 249 VRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp EEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred eEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 5699999988765 34445788899999999999999888765
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=2.9e-26 Score=193.57 Aligned_cols=269 Identities=11% Similarity=0.050 Sum_probs=205.1
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEec--CCcceeeeecccccceeEEEEcc----CCCeEEEEecCCCCCceEEEEccC
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDV--TAATCLKTINSKKYGVDLVCFTS----HPTTVIYSSKNGWDESLRLLSLHD 91 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~~~~d~~i~vwd~~~ 91 (304)
...+.++|+|++|++++.|+.|++||+ .+++.+.++..+ ..+..++|+| +++++++++.. +++|.+||..+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g-~~p~~va~sp~~~~dg~~l~v~~~~--~~~v~v~D~~t 257 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG-IEARSVESSKFKGYEDRYTIAGAYW--PPQFAIMDGET 257 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-SEEEEEEECCSTTCTTTEEEEEEEE--SSEEEEEETTT
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-CCcceEEeCCCcCCCCCEEEEEEcc--CCeEEEEeccc
Confidence 356889999999999999999999999 888888888754 4679999999 99999999853 89999999999
Q ss_pred ceeeeeccc----------ccc-cEEEEEEcCCCC-EEEEcccCCeEEEEeCCcceeec--eEEE-eccceeEecCCCeE
Q 036585 92 NKYSRYFKG----------HHD-RVVLLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQG--LLRV-QGRPAAAYDDQGLV 156 (304)
Q Consensus 92 ~~~~~~~~~----------~~~-~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~--~~~~-~~~~~~~~~~~~~~ 156 (304)
++++..+.. |.. .+.++.++|++. ++++...++.|.+||+.+.+... .+.. .....+.+++++.+
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRY 337 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCE
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCE
Confidence 988877754 223 789999999766 55667788999999998765544 2221 12234678888863
Q ss_pred E--E-ecCCCeEEEEecC-------------CCCCceEEEEecC-CcEEEEee-CCCeEEEEEcCC-------CceeEEE
Q 036585 157 F--G-YEKGPLDIFSVGG-------------DISDANVVKFSND-GRLMLLTT-MEGHIHVLDSFR-------GTLLSTY 211 (304)
Q Consensus 157 ~--~-~~~~~~~~~~~~~-------------~~~~v~~~~~~~~-~~~l~~~~-~dg~i~~~d~~~-------~~~~~~~ 211 (304)
+ . ..++.+.+|+... |......+ ++|+ +..++++. .+++|.+||+.+ ++.+.++
T Consensus 338 l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l 416 (543)
T 1nir_A 338 FMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL 416 (543)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEE
Confidence 3 2 2356777776542 22222222 4677 55566654 579999999988 8888888
Q ss_pred EeCCCCCCcceEEEEcCCCcEEEEec-------CCCcEEEEecCCCcee-eee--------eccCCCCceEEeCCCCcEE
Q 036585 212 NVKPVSRNSTLEASFSPEGMFVISGS-------GDGSVHAWSVRSGKEV-ASW--------MSFDTEPPVIKWAPGSLMF 275 (304)
Q Consensus 212 ~~~~~~~~~i~~~~~s~~~~~l~~~~-------~dg~i~v~d~~~~~~~-~~~--------~~~~~~i~~~~~~~~~~~l 275 (304)
. .+...+..++|+|++++|++++ .+++|.+||+.+++.. ..+ ..+...+..++|+|+|+.+
T Consensus 417 ~---~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~ 493 (543)
T 1nir_A 417 Q---GQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEV 493 (543)
T ss_dssp E---CSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEE
T ss_pred E---cCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEE
Confidence 8 5667778899999999999987 2679999999998876 433 3456789999999999988
Q ss_pred EEec-----Cc--eEEeccCCcccc
Q 036585 276 VTGS-----SE--LSFWIPDLSKLG 293 (304)
Q Consensus 276 ~s~~-----~d--~~iw~~~~~~~~ 293 (304)
+++. .+ |.|||....++.
T Consensus 494 ~~s~~~~~~~~~~i~v~D~~t~~~~ 518 (543)
T 1nir_A 494 WFSVWNGKNDSSALVVVDDKTLKLK 518 (543)
T ss_dssp EEEEECCTTSCCEEEEEETTTTEEE
T ss_pred EEEeecCCCCCCeEEEEECCCceEE
Confidence 8662 23 999998776553
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=6.6e-26 Score=182.20 Aligned_cols=245 Identities=9% Similarity=0.054 Sum_probs=191.8
Q ss_pred eecceeeEeecccCcEEEEeeC-------CCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEE
Q 036585 14 LELSEEILQSMEVGIYLVTASD-------DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 86 (304)
Q Consensus 14 ~~~~~~~i~~~~~~~~l~~~~~-------d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~v 86 (304)
+......+.++++|+++++++. ++.|.+||..+++.+..+.... .+..++|+|+++.++++... ++.|.+
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~--~~~v~~ 115 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL-KPFGATINNTTQTLWFGNTV--NSAVTA 115 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS-CCCSEEEETTTTEEEEEETT--TTEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC-CcceEEECCCCCEEEEEecC--CCEEEE
Confidence 3445566889999998888874 5689999999999888876543 57889999999977776653 799999
Q ss_pred EEccCceeeeecccccc---------cEEEEEEcCCCCEEEEcc--cCCeEEEEeCCcceeeceEEEeccceeEecCCCe
Q 036585 87 LSLHDNKYSRYFKGHHD---------RVVLLSLCSSKDCFISGS--LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGL 155 (304)
Q Consensus 87 wd~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (304)
||..+++.+..+..+.. .+.++.|+|+++++++++ .++.|.+||+++++....+.
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-------------- 181 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-------------- 181 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC--------------
T ss_pred EeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec--------------
Confidence 99999988777765432 278899999999877765 47899999999887655443
Q ss_pred EEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCC-CCCCcceEEEEcCCCcEEE
Q 036585 156 VFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP-VSRNSTLEASFSPEGMFVI 234 (304)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~ 234 (304)
.+...+..++|+|+++++++++.++.|.+||+.+++....+.... .+...+..++|+|++++++
T Consensus 182 ---------------~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 182 ---------------NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAF 246 (353)
T ss_dssp ---------------CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEE
T ss_pred ---------------CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEE
Confidence 122346779999999999999999999999999999888877422 2455677899999999877
Q ss_pred EecC-CCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEec-Cc--eEEeccCCccc
Q 036585 235 SGSG-DGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGS-SE--LSFWIPDLSKL 292 (304)
Q Consensus 235 ~~~~-dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~-~d--~~iw~~~~~~~ 292 (304)
+++. ++.|.+||+.+++.+..+.... ...++|+|++++++.++ .+ +.+|+.+..++
T Consensus 247 ~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred EEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeE
Confidence 6654 5899999999999887776443 36799999999666555 34 88888865443
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=4.8e-26 Score=182.17 Aligned_cols=240 Identities=9% Similarity=0.083 Sum_probs=172.0
Q ss_pred eeeEeecccCcEEEEeeCC-CeEEEEecC--Ccc--eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEc---
Q 036585 18 EEILQSMEVGIYLVTASDD-ESIRLYDVT--AAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL--- 89 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d-~~i~vw~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~--- 89 (304)
...+.++|+|++|++++.+ +.|++|++. +++ .+..+..+. .+..++|+|+++.+++++.. ++.|.+||+
T Consensus 40 ~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~ 116 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYN--AGNVSVTRLEDG 116 (343)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETT--TTEEEEEEEETT
T ss_pred CceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecC--CCeEEEEECCCC
Confidence 4458899999999988886 899999997 444 344454444 78999999999988877653 788999999
Q ss_pred cCceeeeecccccccEEEEEEcCCCCEEEEcc-cCCeEEEEeCCc-ceeeceE--EEeccceeEecCCCeEEEecCCCeE
Q 036585 90 HDNKYSRYFKGHHDRVVLLSLCSSKDCFISGS-LDRTVLLWDQRA-EKCQGLL--RVQGRPAAAYDDQGLVFGYEKGPLD 165 (304)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
...+....+..+ ..+.+++|+|+++++++++ .++.|++||+.+ ++..... ....
T Consensus 117 ~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~--------------------- 174 (343)
T 1ri6_A 117 LPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT--------------------- 174 (343)
T ss_dssp EEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC---------------------
T ss_pred ccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccccc---------------------
Confidence 444455555433 4588899999999888776 889999999987 4332211 1100
Q ss_pred EEEecCCCCCceEEEEecCCcEEEEee-CCCeEEEEEcCC--Cce--eEEEEeCCC---CCCcceEEEEcCCCcEEE-Ee
Q 036585 166 IFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFR--GTL--LSTYNVKPV---SRNSTLEASFSPEGMFVI-SG 236 (304)
Q Consensus 166 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~--~~~--~~~~~~~~~---~~~~i~~~~~s~~~~~l~-~~ 236 (304)
.....+..++|+|+++++++++ .++.|.+||+.. ++. .......+. ....+..++|+|++++|+ ++
T Consensus 175 -----~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~ 249 (343)
T 1ri6_A 175 -----VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD 249 (343)
T ss_dssp -----STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE
T ss_pred -----CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe
Confidence 1224567899999999776554 789999999953 433 222221111 123566899999998877 45
Q ss_pred cCCCcEEEEecC--C--CceeeeeeccCCCCceEEeCCCCcEEEEecC-c--eEEeccC
Q 036585 237 SGDGSVHAWSVR--S--GKEVASWMSFDTEPPVIKWAPGSLMFVTGSS-E--LSFWIPD 288 (304)
Q Consensus 237 ~~dg~i~v~d~~--~--~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~-d--~~iw~~~ 288 (304)
..++.|++||+. + .+.+..+..+.. +..++|+|++++|++++. + +.+|+++
T Consensus 250 ~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 250 RTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred cCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 578999999998 2 334445554444 899999999998888774 3 9999665
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.96 E-value=2.6e-26 Score=183.26 Aligned_cols=257 Identities=9% Similarity=0.024 Sum_probs=193.6
Q ss_pred cEEEEeeCCCeEEEEecCCcceeeeeccccc--ceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccc-c---
Q 036585 28 IYLVTASDDESIRLYDVTAATCLKTINSKKY--GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKG-H--- 101 (304)
Q Consensus 28 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~--- 101 (304)
+++++++.++.|++||+.+++.+..+..... .+..++|+|+++.++++... ++.|.+||+.+++.+..+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK--SESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT--TTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC--CCeEEEEECCCCCeEeeEEcCCccc
Confidence 5789999999999999999998887764332 47899999999887666542 78999999999887766552 1
Q ss_pred -cccEEEEEEcCCCCEEEEcc------------cCCeEEEEeCCcceeeceEEEec-cceeEecCCCeEEEecCCCeEEE
Q 036585 102 -HDRVVLLSLCSSKDCFISGS------------LDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGLVFGYEKGPLDIF 167 (304)
Q Consensus 102 -~~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
...+..++|+|++++++++. .++.|.+||+.+++....+.... ...+.+++++..+...++.+.+|
T Consensus 80 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~i~~~ 159 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVM 159 (337)
T ss_dssp EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSSEEEE
T ss_pred ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeCCeEEEE
Confidence 22567899999999888886 57999999999888776665432 33567888876443336778888
Q ss_pred EecCCC--------CCceEEEEecCCcEEEEeeCCC------------------------eEEEEEcCCCceeEEEEeCC
Q 036585 168 SVGGDI--------SDANVVKFSNDGRLMLLTTMEG------------------------HIHVLDSFRGTLLSTYNVKP 215 (304)
Q Consensus 168 ~~~~~~--------~~v~~~~~~~~~~~l~~~~~dg------------------------~i~~~d~~~~~~~~~~~~~~ 215 (304)
++.... .....+.|+|+++.+++.+..+ .|.+||+.+++.. .....
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~- 237 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVR- 237 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEE-
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecC-
Confidence 764311 1112347889988776654332 4689999998875 33322
Q ss_pred CCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc
Q 036585 216 VSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 216 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
.+...+..++|+|++++++++ ++.|++||+.+++.+..+.. ...+.+++|+|++++|++++.+ +.+|+.+..+
T Consensus 238 ~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 238 IMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLE 312 (337)
T ss_dssp ECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCC
T ss_pred CCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCc
Confidence 345677889999999999988 78999999999888777753 3567899999999988888766 9999986544
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.96 E-value=1.6e-25 Score=179.73 Aligned_cols=243 Identities=13% Similarity=0.155 Sum_probs=169.9
Q ss_pred eeeEeecccCcEEEEeeC---CCeEEEEecCCcc--eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC-
Q 036585 18 EEILQSMEVGIYLVTASD---DESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD- 91 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~---d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~- 91 (304)
...+.++|+|+ |++++. ++.|++|++.+++ .+..+..+...+..++|+|++++|++++.. ++.|.+|++..
T Consensus 42 p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~--~~~v~v~~~~~~ 118 (347)
T 3hfq_A 42 PTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYH--KGTAEVMKIAAD 118 (347)
T ss_dssp CCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETT--TTEEEEEEECTT
T ss_pred cceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCC--CCEEEEEEeCCC
Confidence 44588899999 555544 6899999997665 444555567788999999999999988842 89999999963
Q ss_pred c--eeeeeccc---------ccccEEEEEEcCCCCEEEEcccCCeEEEEeCC-cceeeceEEEeccceeEecCCCeEEEe
Q 036585 92 N--KYSRYFKG---------HHDRVVLLSLCSSKDCFISGSLDRTVLLWDQR-AEKCQGLLRVQGRPAAAYDDQGLVFGY 159 (304)
Q Consensus 92 ~--~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (304)
+ +.+..+.. +...+.+++|+|+++++++...++.|++|++. +++.........
T Consensus 119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~--------------- 183 (347)
T 3hfq_A 119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTM--------------- 183 (347)
T ss_dssp SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEEC---------------
T ss_pred CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEc---------------
Confidence 2 22222221 12248899999999977777778999999998 333221111000
Q ss_pred cCCCeEEEEecCCCCCceEEEEecCCcEEEE-eeCCCeEEEEEcCC--CceeE--EEEeCCC---CCCcceEEEEcCCCc
Q 036585 160 EKGPLDIFSVGGDISDANVVKFSNDGRLMLL-TTMEGHIHVLDSFR--GTLLS--TYNVKPV---SRNSTLEASFSPEGM 231 (304)
Q Consensus 160 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~~~d~~~--~~~~~--~~~~~~~---~~~~i~~~~~s~~~~ 231 (304)
.....+..++|+|+|+++++ ...++.|.+|++.. ++... .+...+. ....+..++|+|||+
T Consensus 184 -----------~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~ 252 (347)
T 3hfq_A 184 -----------EAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGH 252 (347)
T ss_dssp -----------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSC
T ss_pred -----------CCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCC
Confidence 11234567999999996666 45688999999874 54322 2221111 114578899999999
Q ss_pred EEEE-ecCCCcEEEEecCC---CceeeeeeccCCCCceEEeCCCCcEEEEecCc---eEEeccCC
Q 036585 232 FVIS-GSGDGSVHAWSVRS---GKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE---LSFWIPDL 289 (304)
Q Consensus 232 ~l~~-~~~dg~i~v~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d---~~iw~~~~ 289 (304)
+|++ ...++.|.+|++.. .+.+..+..+...+..++|+|||++|++++.+ +.+|.++.
T Consensus 253 ~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 253 FLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 8754 45689999999973 24455566666778999999999988887654 89996553
No 138
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=1.5e-25 Score=180.13 Aligned_cols=232 Identities=13% Similarity=0.079 Sum_probs=183.0
Q ss_pred eeeEeecccCcEEE-EeeCCCeEEEEecCCcceeeeeccccc---------ceeEEEEccCCCeEEEEecCCCCCceEEE
Q 036585 18 EEILQSMEVGIYLV-TASDDESIRLYDVTAATCLKTINSKKY---------GVDLVCFTSHPTTVIYSSKNGWDESLRLL 87 (304)
Q Consensus 18 ~~~i~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~~~~d~~i~vw 87 (304)
...+.++++|++++ +...++.|.+||..+++.+..+..+.. .+..++|+|+++.++++... .++.|.+|
T Consensus 91 ~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-~~~~i~~~ 169 (353)
T 3vgz_A 91 PFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG-KESVIWVV 169 (353)
T ss_dssp CCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-SSCEEEEE
T ss_pred cceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-CCceEEEE
Confidence 44578889998655 445579999999999998887776432 26889999999988887621 17889999
Q ss_pred EccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEE
Q 036585 88 SLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIF 167 (304)
Q Consensus 88 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
|+.+++.+..+..+...+.+++|+|+++++++++.++.|.+||+.+++....+.....
T Consensus 170 d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~---------------------- 227 (353)
T 3vgz_A 170 DGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDD---------------------- 227 (353)
T ss_dssp ETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCS----------------------
T ss_pred cCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCC----------------------
Confidence 9999998888775666688999999999999999999999999998877665543211
Q ss_pred EecCCCCCceEEEEecCCcEEEEeeC-CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec-CCCcEEEE
Q 036585 168 SVGGDISDANVVKFSNDGRLMLLTTM-EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVHAW 245 (304)
Q Consensus 168 ~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~v~ 245 (304)
++...+..++|+|+++++++++. ++.|.+||+.+++....+... . + ..++|+|+++++++++ .++.|.+|
T Consensus 228 ---~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~---~-~-~~~~~s~dg~~l~v~~~~~~~v~~~ 299 (353)
T 3vgz_A 228 ---GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP---E-S-LAVLFNPARNEAYVTHRQAGKVSVI 299 (353)
T ss_dssp ---SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS---S-C-CCEEEETTTTEEEEEETTTTEEEEE
T ss_pred ---CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC---C-C-ceEEECCCCCEEEEEECCCCeEEEE
Confidence 23345678999999998777665 489999999999988888732 2 2 5689999999666554 68999999
Q ss_pred ecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc
Q 036585 246 SVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE 281 (304)
Q Consensus 246 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d 281 (304)
|+.+++.+..+... ..+.+++|+|++++|+.+..+
T Consensus 300 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 300 DAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred ECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 99999888777644 467999999999977665544
No 139
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.95 E-value=8.3e-26 Score=181.26 Aligned_cols=236 Identities=10% Similarity=0.069 Sum_probs=175.6
Q ss_pred EeecccCcEEEEeeCCCeEEEEecCCcceeeeecccc-cceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecc
Q 036585 21 LQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFK 99 (304)
Q Consensus 21 i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~ 99 (304)
+.+.++++++++++.++.|++||+.+++.+..+..+. ..+..++|+|+++.++++... ++.|.+||+.+++.+..+.
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~--~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH--YGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC--CCcEEEEeCCCCcEEEEEE
Confidence 3566778899999999999999999999888776543 257899999999977666532 8999999999988776665
Q ss_pred cc------cccEEEEEEcCCCCEEEEcccC------------CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecC
Q 036585 100 GH------HDRVVLLSLCSSKDCFISGSLD------------RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEK 161 (304)
Q Consensus 100 ~~------~~~v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (304)
.. ...+..++|+|+++++++++.+ +.|.+||+.+++........
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~------------------ 144 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF------------------ 144 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE------------------
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec------------------
Confidence 32 2237789999999999998865 89999999886543322211
Q ss_pred CCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCC--------------------------
Q 036585 162 GPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP-------------------------- 215 (304)
Q Consensus 162 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-------------------------- 215 (304)
.+...+.+++|+|+|+ +++++. .|++||+.+++....+....
T Consensus 145 ---------~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (349)
T 1jmx_B 145 ---------PMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSM 212 (349)
T ss_dssp ---------ECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEE
T ss_pred ---------cCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEe
Confidence 0123466778888888 555433 48888887777665544211
Q ss_pred ---------------------------------------CCCCcceEEEEcC-CCcEEEEecCCCcEEEEecCCCceeee
Q 036585 216 ---------------------------------------VSRNSTLEASFSP-EGMFVISGSGDGSVHAWSVRSGKEVAS 255 (304)
Q Consensus 216 ---------------------------------------~~~~~i~~~~~s~-~~~~l~~~~~dg~i~v~d~~~~~~~~~ 255 (304)
.....+..++|+| ++++++++ ++.|++||+.+++.+..
T Consensus 213 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~ 290 (349)
T 1jmx_B 213 LYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKA 290 (349)
T ss_dssp EEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEE
T ss_pred eeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEE
Confidence 0112345678889 99999988 88999999999988777
Q ss_pred eeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc
Q 036585 256 WMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 256 ~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
+.. ...+.+++|+|++++|++++.+ +.+|+.+..+
T Consensus 291 ~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 291 ANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLE 327 (349)
T ss_dssp EEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTE
T ss_pred EcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccc
Confidence 753 3457899999999888877665 9999986543
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=8.2e-27 Score=204.67 Aligned_cols=255 Identities=8% Similarity=0.014 Sum_probs=170.0
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeeccccc---ceeEEEEccCCCeEEEEecCC------CCCceEEEE
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKY---GVDLVCFTSHPTTVIYSSKNG------WDESLRLLS 88 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~~~------~d~~i~vwd 88 (304)
...+.|+|+|+++++ +.||.|++||+.+++....+..|.. .+.+++|||||++|++++... .++.+++||
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 456789999998776 7899999999999988888877764 499999999999999997521 137889999
Q ss_pred ccCcee--eeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEecc--------------------c
Q 036585 89 LHDNKY--SRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--------------------P 146 (304)
Q Consensus 89 ~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--------------------~ 146 (304)
+.+++. +.....|...+..++|+|||+.|+.++. +.|++||+.+++.......... .
T Consensus 98 ~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~ 176 (723)
T 1xfd_A 98 IPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHI 176 (723)
T ss_dssp SSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSE
T ss_pred CCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcc
Confidence 998875 2222345556889999999999998876 7999999988766543322111 1
Q ss_pred eeEecCCCeEEEe---cCCCeEEEEecC----CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCC---C
Q 036585 147 AAAYDDQGLVFGY---EKGPLDIFSVGG----DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP---V 216 (304)
Q Consensus 147 ~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~---~ 216 (304)
.+.++|++..+.+ +...+.+|.+.. +...+..+.|.++|.. ..+..|++||+.+++....+.... .
T Consensus 177 ~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~----~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 177 AHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSE----NPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp EEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSC----CCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred eEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCC----CCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 2334444322211 112222232211 1112333344333321 112389999998887544444110 1
Q ss_pred CCCcceEEEEcCCCcEEEEecC----CCcEEEEecCCCceeeeeec-cCCCC----ceEEeCCCCcEEEEe
Q 036585 217 SRNSTLEASFSPEGMFVISGSG----DGSVHAWSVRSGKEVASWMS-FDTEP----PVIKWAPGSLMFVTG 278 (304)
Q Consensus 217 ~~~~i~~~~~s~~~~~l~~~~~----dg~i~v~d~~~~~~~~~~~~-~~~~i----~~~~~~~~~~~l~s~ 278 (304)
+...+..++|||||++|++... +..|++||+.+++....+.. +...+ ..++|+|||+.|+..
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEE
Confidence 2567889999999998876642 35799999999887665543 33444 388999999977754
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=1.6e-25 Score=195.90 Aligned_cols=258 Identities=13% Similarity=0.159 Sum_probs=184.3
Q ss_pred EeecccCcEEEEeeCCCeEEEEecCCccee-eeecccc-----------------cceeEEEEccCCCeEEEEecCCCCC
Q 036585 21 LQSMEVGIYLVTASDDESIRLYDVTAATCL-KTINSKK-----------------YGVDLVCFTSHPTTVIYSSKNGWDE 82 (304)
Q Consensus 21 i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~~~~~~~~d~ 82 (304)
+.|+ |+.+++++.|+ | +||+.+++.+ ..+..+. ..+.+++|+|+ +.++++. ++
T Consensus 31 ~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~----~~ 101 (706)
T 2z3z_A 31 LQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT----QG 101 (706)
T ss_dssp CEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE----TT
T ss_pred CcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE----CC
Confidence 5666 67777777788 8 9999998873 4444433 46999999999 7777775 89
Q ss_pred ceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCc-----ceeeceEEEecc------------
Q 036585 83 SLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRA-----EKCQGLLRVQGR------------ 145 (304)
Q Consensus 83 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~------------ 145 (304)
.|++||+.+++.... ..+...+.+++|+|+|+.|+++ .++.|++||+.+ ++..........
T Consensus 102 ~i~~~d~~~~~~~~l-~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 102 GLVGFDMLARKVTYL-FDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQRE 179 (706)
T ss_dssp EEEEEETTTTEEEEE-ECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGC
T ss_pred EEEEEECCCCceEEc-cCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhh
Confidence 999999998876544 3466778899999999999985 689999999988 665443322222
Q ss_pred ----ceeEecCCCeEEEecC-----------------------------------CCeEEEEecC-----------CCCC
Q 036585 146 ----PAAAYDDQGLVFGYEK-----------------------------------GPLDIFSVGG-----------DISD 175 (304)
Q Consensus 146 ----~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~-----------~~~~ 175 (304)
..+.++|++..+.+.. ..+.+|++.. +...
T Consensus 180 ~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 259 (706)
T 2z3z_A 180 FGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKF 259 (706)
T ss_dssp TTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCE
T ss_pred cCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCcee
Confidence 4677899986543322 3455665432 3355
Q ss_pred ceEEEEecCCcEEEEeeCCC-----eEEEEEcCCCceeEEEEeC--CCCCCcceEEEEcC--CCcEEEEecCCCcEEEEe
Q 036585 176 ANVVKFSNDGRLMLLTTMEG-----HIHVLDSFRGTLLSTYNVK--PVSRNSTLEASFSP--EGMFVISGSGDGSVHAWS 246 (304)
Q Consensus 176 v~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~~--~~~~~~i~~~~~s~--~~~~l~~~~~dg~i~v~d 246 (304)
+..++|+|||+.|++++.++ .|++||+.+++....+... ......+..++|+| ||+++++++.|+.+++|+
T Consensus 260 ~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~ 339 (706)
T 2z3z_A 260 LTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYL 339 (706)
T ss_dssp EEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEE
T ss_pred EeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEE
Confidence 78999999999999987765 8999999998433333211 11112346789999 999999999999999998
Q ss_pred cC-CCceeeeeeccCCCCce-EEeCCCCcEEEEecCc-----eEEeccCC
Q 036585 247 VR-SGKEVASWMSFDTEPPV-IKWAPGSLMFVTGSSE-----LSFWIPDL 289 (304)
Q Consensus 247 ~~-~~~~~~~~~~~~~~i~~-~~~~~~~~~l~s~~~d-----~~iw~~~~ 289 (304)
+. +++.+..+..+...+.. ++|+|+++.|+.++.+ .+||.++.
T Consensus 340 ~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 340 YDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp EETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred EECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 86 67777788778777876 7999999877665543 47776654
No 142
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.95 E-value=1.2e-25 Score=185.05 Aligned_cols=199 Identities=10% Similarity=0.084 Sum_probs=150.8
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCcc----------eeee-----ecccccceeEEEEccCCCeEE----EEecC
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAAT----------CLKT-----INSKKYGVDLVCFTSHPTTVI----YSSKN 78 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~----------~~~~-----~~~~~~~v~~~~~~~~~~~l~----~~~~~ 78 (304)
...+.+++.+.++++++.++ +++|+..... .+.. ...+...|.+++|+|++++|+ +++.
T Consensus 39 ~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~- 116 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY- 116 (434)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT-
T ss_pred ccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC-
Confidence 34577788889999999887 8998754211 0110 112445799999999999999 5555
Q ss_pred CCCCceEEEEccCc--------e---eeeecccccccEEEEEEcCC-CCEEEEcccCCeEEEEeCCcceeeceEEEeccc
Q 036585 79 GWDESLRLLSLHDN--------K---YSRYFKGHHDRVVLLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP 146 (304)
Q Consensus 79 ~~d~~i~vwd~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 146 (304)
|+.|++||+.++ + ....+.+|...|.+++|+|+ +.+|++++.||+|++||++++......
T Consensus 117 --d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~------ 188 (434)
T 2oit_A 117 --GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT------ 188 (434)
T ss_dssp --EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE------
T ss_pred --CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec------
Confidence 999999999765 1 14556779999999999997 789999999999999999987443222
Q ss_pred eeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCC----CCCcce
Q 036585 147 AAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV----SRNSTL 222 (304)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~----~~~~i~ 222 (304)
.+|...+.+++|+|+|++|++|+.||.|++||++ ++....+..+.. |...+.
T Consensus 189 -----------------------~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 189 -----------------------LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp -----------------------ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEE
T ss_pred -----------------------cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEE
Confidence 1356789999999999999999999999999998 555555543221 233899
Q ss_pred EEEEcCCCcEEEEe-cCCC------cEEEEecCCC
Q 036585 223 EASFSPEGMFVISG-SGDG------SVHAWSVRSG 250 (304)
Q Consensus 223 ~~~~s~~~~~l~~~-~~dg------~i~v~d~~~~ 250 (304)
+++|++++.++++. ..+| .+++|++++.
T Consensus 245 ~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 245 DVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99999998887553 2343 3899999764
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=8.4e-25 Score=174.53 Aligned_cols=235 Identities=11% Similarity=0.023 Sum_probs=174.2
Q ss_pred ceeeEeecccCcEE-EEeeCCCeEEEEecCCcceeeeeccc-----ccceeEEEEccCCCeEEEEecC------C---CC
Q 036585 17 SEEILQSMEVGIYL-VTASDDESIRLYDVTAATCLKTINSK-----KYGVDLVCFTSHPTTVIYSSKN------G---WD 81 (304)
Q Consensus 17 ~~~~i~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~------~---~d 81 (304)
....+.++++|+++ ++++.++.|.+||+.+++.+..+... ...+..++|+|+++.++++... . .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 35678899999765 45556789999999999887766532 2367889999999999988510 0 07
Q ss_pred CceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEec-cceeEecCCCeEE--E
Q 036585 82 ESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDDQGLVF--G 158 (304)
Q Consensus 82 ~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~ 158 (304)
+.|.+||+.+++.+..+.. ...+.+++|+|++++++++ ++.|++||+++++....+.... .....+++++..+ .
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 191 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQ 191 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeee
Confidence 9999999999887776663 4567889999999988877 6889999999888765554332 1222444444211 0
Q ss_pred ecCC------------------------CeEEEE----------ecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCC
Q 036585 159 YEKG------------------------PLDIFS----------VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 204 (304)
Q Consensus 159 ~~~~------------------------~~~~~~----------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 204 (304)
.... .+.+++ +..+...+..++|+|++++++++ ++.|++||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~ 269 (337)
T 1pby_B 192 HESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK 269 (337)
T ss_dssp CTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT
T ss_pred ccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC
Confidence 0000 122333 22334566789999999999888 78999999999
Q ss_pred CceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccC
Q 036585 205 GTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFD 260 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 260 (304)
++....+. ....+.+++|+|++++|++++.++.|++||+.+++.+..+..+.
T Consensus 270 ~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 270 NASIKRVP----LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp TEEEEEEE----CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred CcCcceec----CCCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 98888776 33567889999999999999999999999999999888876553
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=9.5e-26 Score=185.57 Aligned_cols=216 Identities=12% Similarity=0.091 Sum_probs=160.7
Q ss_pred CeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee----------eee-----cccc
Q 036585 37 ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY----------SRY-----FKGH 101 (304)
Q Consensus 37 ~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~----------~~~-----~~~~ 101 (304)
+.+++|+... . .+...++.+++++++..+++++. ++ +++|+...... +.. ...+
T Consensus 23 ~~vri~~~~~-~------~~~~~~n~lavs~~~~~l~~~~~---dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (434)
T 2oit_A 23 KKVRIFDSPE-E------LPKERSSLLAVSNKYGLVFAGGA---SG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPM 91 (434)
T ss_dssp CEEECSCCCS-S------CCCSCCBCEEEETTTTEEEEEET---TE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECC
T ss_pred eeEEecCCcc-c------cCCCCccEEEEecCCCEEEEECC---CE-EEEEEchHhhhhcccccCcccccccCccccccC
Confidence 4688887531 1 12346889999999999999986 66 89987642110 000 1124
Q ss_pred cccEEEEEEcCCCCEEE----EcccCCeEEEEeCCcce-----eeceEEEeccceeEecCCCeEEEecCCCeEEEEecCC
Q 036585 102 HDRVVLLSLCSSKDCFI----SGSLDRTVLLWDQRAEK-----CQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGD 172 (304)
Q Consensus 102 ~~~v~~~~~~~~~~~l~----~~~~dg~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
...|.+++|+|++++|+ +++.|+.|++||+++.. ....+. .+..+.+|
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~-----------------------~~~~~~~h 148 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFA-----------------------YHKLLKDA 148 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSE-----------------------EEECCCSG
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceee-----------------------eeeccCCC
Confidence 56799999999999999 89999999999997651 100000 01122357
Q ss_pred CCCceEEEEecC-CcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCc
Q 036585 173 ISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGK 251 (304)
Q Consensus 173 ~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~ 251 (304)
...|.+++|+|+ +.+|++++.||+|++||++++....... .|...+.+++|+|+|++|++|+.||.|++||++ ++
T Consensus 149 ~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~---~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~ 224 (434)
T 2oit_A 149 GGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATL---PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ 224 (434)
T ss_dssp GGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEE---CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC
T ss_pred CCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeecc---CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc
Confidence 889999999998 8899999999999999999986655554 578899999999999999999999999999998 55
Q ss_pred eeeeeecc-------CCCCceEEeCCCCcEEEEec-Cc--------eEEeccCCc
Q 036585 252 EVASWMSF-------DTEPPVIKWAPGSLMFVTGS-SE--------LSFWIPDLS 290 (304)
Q Consensus 252 ~~~~~~~~-------~~~i~~~~~~~~~~~l~s~~-~d--------~~iw~~~~~ 290 (304)
....+..| ...+.+++|++++.++++.+ .+ +++|++...
T Consensus 225 ~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 225 EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 55555433 23789999999998885433 21 788988654
No 145
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=1.6e-23 Score=168.89 Aligned_cols=243 Identities=11% Similarity=0.172 Sum_probs=167.6
Q ss_pred eeEeecccCcEEEEeeCC----CeEEEEecCC--cce--eeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEcc
Q 036585 19 EILQSMEVGIYLVTASDD----ESIRLYDVTA--ATC--LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 90 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d----~~i~vw~~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~ 90 (304)
..+.++|+|++|++++.+ +.|.+|++.. ++. +.....+......+++ +++.++++... ++.|.+|++.
T Consensus 53 ~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~--~~~v~~~~~~ 128 (361)
T 3scy_A 53 SYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYS--GGSITVFPIG 128 (361)
T ss_dssp CSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETT--TTEEEEEEBC
T ss_pred ceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECC--CCEEEEEEeC
Confidence 447899999999999886 7999998875 432 3333334456677777 88888887753 8899999997
Q ss_pred Cceeeeecc--------------cccccEEEEEEcCCCCEEEEcc-cCCeEEEEeCCccee------eceE-EEecccee
Q 036585 91 DNKYSRYFK--------------GHHDRVVLLSLCSSKDCFISGS-LDRTVLLWDQRAEKC------QGLL-RVQGRPAA 148 (304)
Q Consensus 91 ~~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~------~~~~-~~~~~~~~ 148 (304)
....+..+. .+...+.+++|+|+++++++++ .++.|++|++..... .... ...
T Consensus 129 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~----- 203 (361)
T 3scy_A 129 QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPE----- 203 (361)
T ss_dssp TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEE-----
T ss_pred CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccc-----
Confidence 543322211 1223468899999999665554 588999999875442 1110 000
Q ss_pred EecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEee-CCCeEEEEEcCCCceeE--EEEeCCCCCCcceEEE
Q 036585 149 AYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLS--TYNVKPVSRNSTLEAS 225 (304)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~--~~~~~~~~~~~i~~~~ 225 (304)
... .........++|+|+|+++++++ .++.|.+||+.+++... .+.....+......++
T Consensus 204 -----------------~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~ 265 (361)
T 3scy_A 204 -----------------AFK-VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIH 265 (361)
T ss_dssp -----------------EEE-CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEE
T ss_pred -----------------cee-cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEE
Confidence 000 01234567899999999887777 68999999998775533 3332223334567999
Q ss_pred EcCCCcEEEEecCC--CcEEEEecC--CCc--eeeeeeccCCCCceEEeCCCCcEEEEecCc---eEEeccCC
Q 036585 226 FSPEGMFVISGSGD--GSVHAWSVR--SGK--EVASWMSFDTEPPVIKWAPGSLMFVTGSSE---LSFWIPDL 289 (304)
Q Consensus 226 ~s~~~~~l~~~~~d--g~i~v~d~~--~~~--~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d---~~iw~~~~ 289 (304)
|+|||++|+++..+ +.|.+|++. +++ .+..+.. ...+..++|+|+|++|++++.+ +.+|.++.
T Consensus 266 ~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 266 LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 99999998776654 889999995 444 3444444 5678899999999988888743 89977764
No 146
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.94 E-value=1.5e-24 Score=173.44 Aligned_cols=230 Identities=12% Similarity=0.162 Sum_probs=158.9
Q ss_pred cEEE-EeeCCCeEEEEecC-Cc--ceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEcc--Cce--eeeecc
Q 036585 28 IYLV-TASDDESIRLYDVT-AA--TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DNK--YSRYFK 99 (304)
Q Consensus 28 ~~l~-~~~~d~~i~vw~~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~--~~~--~~~~~~ 99 (304)
++++ +++.|+.|++|++. ++ +.+..+ .+...+.+++|+|++++|++++.. ++.|.+|++. +++ .+..+.
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRP--EFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSCCCCEEECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeE-ecCCCCceEEECCCCCEEEEeecC--CCeEEEEEecCCCCceeeccccc
Confidence 4444 44789999999985 33 233333 466688999999999999998872 4999999997 444 333444
Q ss_pred cccccEEEEEEcCCCCEEEEcc-cCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceE
Q 036585 100 GHHDRVVLLSLCSSKDCFISGS-LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANV 178 (304)
Q Consensus 100 ~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 178 (304)
.+. .+..++|+|+++++++++ .++.|.+||+..+......... .....+.+
T Consensus 82 ~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~---------------------------~~~~~~~~ 133 (343)
T 1ri6_A 82 LPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV---------------------------EGLDGCHS 133 (343)
T ss_dssp CSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE---------------------------CCCTTBCC
T ss_pred cCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc---------------------------cCCCCceE
Confidence 333 788999999999776665 4889999999532221111110 12235788
Q ss_pred EEEecCCcEEEEee-CCCeEEEEEcCC-CceeEEE--EeCCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecCC--Cc
Q 036585 179 VKFSNDGRLMLLTT-MEGHIHVLDSFR-GTLLSTY--NVKPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVRS--GK 251 (304)
Q Consensus 179 ~~~~~~~~~l~~~~-~dg~i~~~d~~~-~~~~~~~--~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~~--~~ 251 (304)
++|+|+++++++++ .++.|++||+.+ ++..... .........+..++|+|++++++++ ..++.|.+||+.. ++
T Consensus 134 ~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~ 213 (343)
T 1ri6_A 134 ANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGN 213 (343)
T ss_dssp CEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSC
T ss_pred EEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc
Confidence 99999999888877 899999999987 6544322 2111234577889999999977655 4789999999953 43
Q ss_pred e--eeeee---cc---CCCCceEEeCCCCcEEEEec-Cc--eEEeccC
Q 036585 252 E--VASWM---SF---DTEPPVIKWAPGSLMFVTGS-SE--LSFWIPD 288 (304)
Q Consensus 252 ~--~~~~~---~~---~~~i~~~~~~~~~~~l~s~~-~d--~~iw~~~ 288 (304)
. ...+. .. ...+..++|+|++++|+.+. .+ +.+|+++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 214 IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 2 22222 11 22455799999998777444 44 9999987
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=1.1e-24 Score=191.76 Aligned_cols=265 Identities=10% Similarity=0.083 Sum_probs=188.3
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcc--eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAAT--CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
..+.++|||++|++++. +.|++||+.+++ ....+..|...+..++|+|||+.|++++ ++.|++||+.+++...
T Consensus 112 ~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~----~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 112 VDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR----GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp CCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE----TTEEEEEETTTTEEEE
T ss_pred ceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe----CCcEEEEecCCCCEEE
Confidence 45789999999999987 899999999873 4556777878899999999999999998 6799999999887666
Q ss_pred eccccccc----------------EEEEEEcCCCCEEEEcccCC---------------------------------eEE
Q 036585 97 YFKGHHDR----------------VVLLSLCSSKDCFISGSLDR---------------------------------TVL 127 (304)
Q Consensus 97 ~~~~~~~~----------------v~~~~~~~~~~~l~~~~~dg---------------------------------~i~ 127 (304)
....+... +..+.|+|||++|++++.|+ .|+
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 55444332 47799999999999987765 889
Q ss_pred EEeCCc-ceeeceEEE----eccceeEecCCCeEEEec-------CCCeEEEEecC---------CCC----CceEEEEe
Q 036585 128 LWDQRA-EKCQGLLRV----QGRPAAAYDDQGLVFGYE-------KGPLDIFSVGG---------DIS----DANVVKFS 182 (304)
Q Consensus 128 iwd~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~---------~~~----~v~~~~~~ 182 (304)
+||+.+ ++....... .....+.+ +++..+... ...+.+|++.. +.. .+..++|+
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC
Confidence 999987 664432211 11224567 776443211 22344444332 111 34689999
Q ss_pred cCCcEEEEeeCCCeEEEEEcC-CCceeEEEEeCCCCCCcceEE-EEcCCCcEEE-EecCCC--cEEEEecCC-Cceeeee
Q 036585 183 NDGRLMLLTTMEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLEA-SFSPEGMFVI-SGSGDG--SVHAWSVRS-GKEVASW 256 (304)
Q Consensus 183 ~~~~~l~~~~~dg~i~~~d~~-~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~-~~~~dg--~i~v~d~~~-~~~~~~~ 256 (304)
|||+++++++.+|.+++|.+. +++ ...+. .+...+..+ .|+|+++.|+ +++.++ .+++|++.. ++....+
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~---~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l 421 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRIDSKGK-AAALT---HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRL 421 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEECSSSC-EEESC---CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEEC
T ss_pred CCCeEEEEecCCCccEEEEEcCCCC-eeeee---ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeec
Confidence 999988889999987777765 344 44443 456677777 5999998775 455555 899999864 5555666
Q ss_pred eccCCCCceEEeCCCCcEEEEecCc------eEEeccCCccccc
Q 036585 257 MSFDTEPPVIKWAPGSLMFVTGSSE------LSFWIPDLSKLGA 294 (304)
Q Consensus 257 ~~~~~~i~~~~~~~~~~~l~s~~~d------~~iw~~~~~~~~~ 294 (304)
.. ...+..++|+||+++|+....+ +.+|+.+.+.++.
T Consensus 422 ~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~~ 464 (741)
T 2ecf_A 422 SK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIAT 464 (741)
T ss_dssp CC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEEC
T ss_pred cc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEEE
Confidence 54 5668899999999988766543 5666655544433
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=2.8e-24 Score=188.16 Aligned_cols=243 Identities=10% Similarity=0.100 Sum_probs=176.8
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCC-----cceeeeecccccc--------------eeEEEEccCCCeEEEEecC-
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTA-----ATCLKTINSKKYG--------------VDLVCFTSHPTTVIYSSKN- 78 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~~~- 78 (304)
..+.++|+|++|+++ .++.|++|++.+ ++.......+... +.+++|+||+++|++++.+
T Consensus 124 ~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~ 202 (706)
T 2z3z_A 124 ASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ 202 (706)
T ss_dssp TTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC
T ss_pred cCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC
Confidence 447899999999995 679999999998 7766555444332 4889999999999998720
Q ss_pred -----------------------------CCCCceEEEEccCceeeeecc--cccccEEEEEEcCCCCEEEEcccCC---
Q 036585 79 -----------------------------GWDESLRLLSLHDNKYSRYFK--GHHDRVVLLSLCSSKDCFISGSLDR--- 124 (304)
Q Consensus 79 -----------------------------~~d~~i~vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg--- 124 (304)
..+..|++||+.+++...... .|...+.+++|+|+++.|++++.++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 282 (706)
T 2z3z_A 203 SMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQN 282 (706)
T ss_dssp TTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSC
T ss_pred CCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCC
Confidence 015789999999887654442 4667899999999999999887765
Q ss_pred --eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEec--CCcEEEEeeCCCeEEEE
Q 036585 125 --TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSN--DGRLMLLTTMEGHIHVL 200 (304)
Q Consensus 125 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~ 200 (304)
.|++||+.+++....+...... .....+..++|+| +|++++++..+|.+++|
T Consensus 283 ~~~v~~~d~~~g~~~~~~~~~~~~------------------------~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~ 338 (706)
T 2z3z_A 283 ECKVNAYDAETGRFVRTLFVETDK------------------------HYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLY 338 (706)
T ss_dssp EEEEEEEETTTCCEEEEEEEEECS------------------------SCCCCCSCCEECTTCSSEEEEEECTTSSCEEE
T ss_pred eeEEEEEECCCCceeeEEEEccCC------------------------CeECccCCceeecCCCCEEEEEEccCCccEEE
Confidence 8999999987333222211000 0112346789999 99999999999999999
Q ss_pred EcC-CCceeEEEEeCCCCCCcceE-EEEcCCCcEEEEec-CCC----cEEEEecCCCceeeeeeccCCCCceEEeCCCCc
Q 036585 201 DSF-RGTLLSTYNVKPVSRNSTLE-ASFSPEGMFVISGS-GDG----SVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSL 273 (304)
Q Consensus 201 d~~-~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~-~dg----~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 273 (304)
++. +++....+. .+...+.. ++|+|+++.|+.++ .++ .|+.||+.+++ ...+. +...+.+++|+|||+
T Consensus 339 ~~~~~~~~~~~l~---~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~ 413 (706)
T 2z3z_A 339 LYDTTGRLIRQVT---KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGS 413 (706)
T ss_dssp EEETTSCEEEECC---CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSS
T ss_pred EEECCCCEEEecC---CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCC
Confidence 876 555555554 45566766 79999998876554 444 57777777665 33443 667789999999999
Q ss_pred EEEEecCc------eEEeccCCcc
Q 036585 274 MFVTGSSE------LSFWIPDLSK 291 (304)
Q Consensus 274 ~l~s~~~d------~~iw~~~~~~ 291 (304)
+++..+.+ +.+|+.+..+
T Consensus 414 ~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 414 AIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEEecCCCCCcEEEEEECCCCe
Confidence 88766432 7788776554
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.93 E-value=1.1e-24 Score=186.59 Aligned_cols=230 Identities=14% Similarity=0.085 Sum_probs=168.9
Q ss_pred ceeeEeecccCcEEEEeeC-CCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC---c
Q 036585 17 SEEILQSMEVGIYLVTASD-DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD---N 92 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~---~ 92 (304)
....+.+++||++||+++. ||+++||++.+++..+....+...+..++|+|+ +.++++...+.+...++|.+.. +
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g 101 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPG 101 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTT
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCC
Confidence 3456889999999999887 999999999766654444334368999999999 6666555311155566665543 2
Q ss_pred eeeeecccccccEEEEEEcCCCC--EEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEec
Q 036585 93 KYSRYFKGHHDRVVLLSLCSSKD--CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVG 170 (304)
Q Consensus 93 ~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
... .+.... .+...+|+|+++ .+++++. +.+.+||+.+++.......
T Consensus 102 ~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~-~~~~l~d~~~g~~~~l~~~---------------------------- 150 (582)
T 3o4h_A 102 EEQ-RLEAVK-PMRILSGVDTGEAVVFTGATE-DRVALYALDGGGLRELARL---------------------------- 150 (582)
T ss_dssp CCE-ECTTSC-SBEEEEEEECSSCEEEEEECS-SCEEEEEEETTEEEEEEEE----------------------------
T ss_pred ccc-cccCCC-CceeeeeCCCCCeEEEEecCC-CCceEEEccCCcEEEeecC----------------------------
Confidence 222 333222 234567888775 3444444 4455999988765443321
Q ss_pred CCCCCceEEEEecCCcEEEEeeCC----CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCC--cEEE
Q 036585 171 GDISDANVVKFSNDGRLMLLTTME----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG--SVHA 244 (304)
Q Consensus 171 ~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~i~v 244 (304)
.. .+++|+|||+++++++.+ +.|++||+.+++.. .+. .+...+..++|||||++|+++..++ .|++
T Consensus 151 --~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~---~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~ 222 (582)
T 3o4h_A 151 --PG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFD---SGEGSFSSASISPGMKVTAGLETAREARLVT 222 (582)
T ss_dssp --SS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EEC---CSSCEEEEEEECTTSCEEEEEECSSCEEEEE
T ss_pred --CC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Eee---cCCCccccceECCCCCEEEEccCCCeeEEEE
Confidence 11 679999999999988776 78999999888765 343 4677889999999999999888888 8999
Q ss_pred EecCCCceeeeeeccCCCCceEE--------eCCCCcEEEEecCc--eEEecc
Q 036585 245 WSVRSGKEVASWMSFDTEPPVIK--------WAPGSLMFVTGSSE--LSFWIP 287 (304)
Q Consensus 245 ~d~~~~~~~~~~~~~~~~i~~~~--------~~~~~~~l~s~~~d--~~iw~~ 287 (304)
||+.+++.. .+..|...+..++ |+|||.++++++.+ +++|.+
T Consensus 223 ~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 223 VDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp ECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred EcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 999988877 7777877788888 99999888888877 899988
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=1.1e-24 Score=191.30 Aligned_cols=261 Identities=10% Similarity=0.035 Sum_probs=168.0
Q ss_pred eeEeecccCcEEEEeeCC---------CeEEEEecCCcce--eeeecccccceeEEEEccCCCeEEEEecCCCCCceEEE
Q 036585 19 EILQSMEVGIYLVTASDD---------ESIRLYDVTAATC--LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 87 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d---------~~i~vw~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vw 87 (304)
..+.++|||++|++++.+ +.+.+||+.+++. +.....|...+..++|||||+.|++++ ++.|++|
T Consensus 64 ~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~----~~~i~~~ 139 (723)
T 1xfd_A 64 IRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF----ENNIYYC 139 (723)
T ss_dssp SEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEE----TTEEEEE
T ss_pred ceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEE----CCeEEEE
Confidence 458899999999999874 7788999998875 222234444588999999999999998 6799999
Q ss_pred EccCceeeeecccccccE------------------EEEEEcCCCCEEEEcccC-CeEEEEeCCcceeeceEEEecccee
Q 036585 88 SLHDNKYSRYFKGHHDRV------------------VLLSLCSSKDCFISGSLD-RTVLLWDQRAEKCQGLLRVQGRPAA 148 (304)
Q Consensus 88 d~~~~~~~~~~~~~~~~v------------------~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~ 148 (304)
|+.+++.......+...+ .+++|+|||+.|++++.| +.+.+|++........ .....+
T Consensus 140 ~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 216 (723)
T 1xfd_A 140 AHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIY---PTVKPY 216 (723)
T ss_dssp SSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSS---CCCEEE
T ss_pred ECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCC---Ccceec
Confidence 999887766555444333 789999999999988754 3455555432111000 000111
Q ss_pred EecCCCeEEEecCCCeEEEEec---------C------CCCCceEEEEecCCcEEEEeeC----CCeEEEEEcCCCceeE
Q 036585 149 AYDDQGLVFGYEKGPLDIFSVG---------G------DISDANVVKFSNDGRLMLLTTM----EGHIHVLDSFRGTLLS 209 (304)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~---------~------~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~~~~ 209 (304)
.+.+++.. .....+.+|++. . +...+..++|+|||+++++... +..|++||+.+++...
T Consensus 217 ~~~~~G~~--~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~ 294 (723)
T 1xfd_A 217 HYPKAGSE--NPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK 294 (723)
T ss_dssp ECCBTTSC--CCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE
T ss_pred cCCCCCCC--CCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE
Confidence 11111100 000112222211 1 2346788999999998877643 3579999999988776
Q ss_pred EEEeCCCCCCcc----eEEEEcCCCcEEEE--ecCCC------cEEEEe-cCCCce--eeeeeccCCCCce-EEeCCCCc
Q 036585 210 TYNVKPVSRNST----LEASFSPEGMFVIS--GSGDG------SVHAWS-VRSGKE--VASWMSFDTEPPV-IKWAPGSL 273 (304)
Q Consensus 210 ~~~~~~~~~~~i----~~~~~s~~~~~l~~--~~~dg------~i~v~d-~~~~~~--~~~~~~~~~~i~~-~~~~~~~~ 273 (304)
.+... +...+ ..++|+|||+.|+. +..++ .|++|| ...++. ...+..+...+.. ++|+|||+
T Consensus 295 ~~~~~--~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~ 372 (723)
T 1xfd_A 295 KHEDE--SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGN 372 (723)
T ss_dssp EEEEE--CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTT
T ss_pred EEEec--cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCC
Confidence 65421 22332 36899999997775 44566 577777 344441 4555444444554 69999999
Q ss_pred EEEEecC----c-eEEeccCCc
Q 036585 274 MFVTGSS----E-LSFWIPDLS 290 (304)
Q Consensus 274 ~l~s~~~----d-~~iw~~~~~ 290 (304)
.|+..+. . ++||.++..
T Consensus 373 ~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 373 KIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp EEEEEESSSCTTCCEEEEECSS
T ss_pred EEEEEEcCCCCcceEEEEEeCC
Confidence 8875543 2 889988753
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=2e-24 Score=196.25 Aligned_cols=226 Identities=12% Similarity=0.082 Sum_probs=184.9
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceeeeecc-----------cccceeEEEEc-cCCCeEEEEecCCCCCceEEE
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINS-----------KKYGVDLVCFT-SHPTTVIYSSKNGWDESLRLL 87 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~~~~d~~i~vw 87 (304)
...++|+|++|+++. ++.|.+|++...+ +..+.. |...+..++|+ |+++.+++++ ++.|.+|
T Consensus 249 ~~~~SpDG~~la~~~-~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~----~~~i~~~ 322 (1045)
T 1k32_A 249 PRHLNTDGRRILFSK-GGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS----RGQAFIQ 322 (1045)
T ss_dssp EEEEEESSSCEEEEE-TTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE----TTEEEEE
T ss_pred eeeEcCCCCEEEEEe-CCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE----cCEEEEE
Confidence 468899999999884 8899999985443 335554 34478999999 9999999988 7899999
Q ss_pred EccCceeeeecccccc-cEEEEEEcCCCCEEEEcccCCeEE-EEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeE
Q 036585 88 SLHDNKYSRYFKGHHD-RVVLLSLCSSKDCFISGSLDRTVL-LWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLD 165 (304)
Q Consensus 88 d~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
++.+++... +..|.. .+..++|+ +++.+++++.+..+. +||+.+++.....
T Consensus 323 ~~~~~~~~~-~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~------------------------- 375 (1045)
T 1k32_A 323 DVSGTYVLK-VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFE------------------------- 375 (1045)
T ss_dssp CTTSSBEEE-CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECC-------------------------
T ss_pred cCCCCceEE-ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEec-------------------------
Confidence 998876544 556777 89999999 999999988888888 9998765432211
Q ss_pred EEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCC-----
Q 036585 166 IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG----- 240 (304)
Q Consensus 166 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----- 240 (304)
.+...+..++|+|||++|++++.++.|++||+.+++...... .+...+..++|||||++|++++.++
T Consensus 376 -----~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~---~~~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 376 -----ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER---SREAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp -----CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE---CSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred -----CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEecc---CCCCCccceEECCCCCeEEEEecCcccccc
Confidence 244678899999999999999999999999999998877775 5778889999999999998887644
Q ss_pred -----cEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEecc
Q 036585 241 -----SVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIP 287 (304)
Q Consensus 241 -----~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~ 287 (304)
.|++||+.+++ +..+..|...+..++|+|||++|++++.+ ..+|+.
T Consensus 448 ~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp SCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred CCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 89999998877 66777788888999999999999988876 566653
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.93 E-value=1.1e-23 Score=169.97 Aligned_cols=247 Identities=7% Similarity=0.004 Sum_probs=171.5
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecC-Ccceeeeeccc-ccceeEEEEccCCCe--EEEEe-------------cCCC
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVT-AATCLKTINSK-KYGVDLVCFTSHPTT--VIYSS-------------KNGW 80 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~~~-------------~~~~ 80 (304)
...+.++|+|++|++++.+ .|.+|++. +++........ .+.+.+++|+|++++ ++++. .
T Consensus 42 ~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~--- 117 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF--- 117 (365)
T ss_dssp CSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS---
T ss_pred CcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC---
Confidence 4468889999999999888 99999997 77665433211 123566899999995 33442 3
Q ss_pred CCceEEEEcc-Cceeeeecc----cccccEEEEEEcCCCCEEEEcc-cCCeEEEEeCC-cceeeceEEEeccceeEecCC
Q 036585 81 DESLRLLSLH-DNKYSRYFK----GHHDRVVLLSLCSSKDCFISGS-LDRTVLLWDQR-AEKCQGLLRVQGRPAAAYDDQ 153 (304)
Q Consensus 81 d~~i~vwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~ 153 (304)
++.+.+|++. +++....+. .+...+.+++|+|+|++++++. .++.|++||+. +++........
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~---------- 187 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVD---------- 187 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEE----------
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEe----------
Confidence 8899999997 455443333 2456789999999999888765 46799999998 55432211110
Q ss_pred CeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeC-CCeEEEEEcC--CCceeE---EEEeCCC----CCC----
Q 036585 154 GLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTM-EGHIHVLDSF--RGTLLS---TYNVKPV----SRN---- 219 (304)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~d~~--~~~~~~---~~~~~~~----~~~---- 219 (304)
...+...+..++|+|+|+++++++. ++.|.+|++. +++... .+...+. +..
T Consensus 188 ---------------~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~ 252 (365)
T 1jof_A 188 ---------------APDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGK 252 (365)
T ss_dssp ---------------CSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSS
T ss_pred ---------------cCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCccccccc
Confidence 0012345788999999999888765 6899999865 565432 2332111 111
Q ss_pred --cceEEE-EcCCCcEEEEecCCC------cEEEEecC-CCceee---eeeccCCCCceEEeCC---CCcEEEEecCc--
Q 036585 220 --STLEAS-FSPEGMFVISGSGDG------SVHAWSVR-SGKEVA---SWMSFDTEPPVIKWAP---GSLMFVTGSSE-- 281 (304)
Q Consensus 220 --~i~~~~-~s~~~~~l~~~~~dg------~i~v~d~~-~~~~~~---~~~~~~~~i~~~~~~~---~~~~l~s~~~d-- 281 (304)
.+..++ |+|||++|++++.+. .|.+|++. +++... ....+...+..++|+| ||++|++++.+
T Consensus 253 ~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~ 332 (365)
T 1jof_A 253 GLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEG 332 (365)
T ss_dssp BSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSC
T ss_pred ccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCC
Confidence 478899 999999988775432 79999996 566433 2333556688999999 89999988754
Q ss_pred -eEEeccCCcccc
Q 036585 282 -LSFWIPDLSKLG 293 (304)
Q Consensus 282 -~~iw~~~~~~~~ 293 (304)
+++|+++.+.+.
T Consensus 333 ~v~v~~~~~~~l~ 345 (365)
T 1jof_A 333 WLEIYRWKDEFLH 345 (365)
T ss_dssp EEEEEEEETTEEE
T ss_pred eEEEEEEchhhCc
Confidence 899998766543
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=4.9e-25 Score=193.30 Aligned_cols=255 Identities=9% Similarity=0.082 Sum_probs=175.3
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeeccccc---ceeEEEEccCCCeEEEEecC------CCCCceEEEEc
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKY---GVDLVCFTSHPTTVIYSSKN------GWDESLRLLSL 89 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~~------~~d~~i~vwd~ 89 (304)
..+.++++|++++++ .|+.|++||+.+++....+..+.. .+.+++|||||++|++++.. +.++.|++||+
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 357899999766655 689999999999998877776654 48999999999999988741 01589999999
Q ss_pred cCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEe
Q 036585 90 HDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSV 169 (304)
Q Consensus 90 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
.+++.+.... ....+..++|+|||+.|+.+. ++.|++||+.+++............ ++
T Consensus 98 ~~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~------------------v~-- 155 (719)
T 1z68_A 98 SNGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENK------------------IF-- 155 (719)
T ss_dssp TTTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTT------------------EE--
T ss_pred CCCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCC------------------eE--
Confidence 9987631111 135688899999999999885 7899999998876543221100000 00
Q ss_pred cCCC---------CCceEEEEecCCcEEEEeeCCC----------------------------------eEEEEEcCCCc
Q 036585 170 GGDI---------SDANVVKFSNDGRLMLLTTMEG----------------------------------HIHVLDSFRGT 206 (304)
Q Consensus 170 ~~~~---------~~v~~~~~~~~~~~l~~~~~dg----------------------------------~i~~~d~~~~~ 206 (304)
.++. .....++|||||++|++++.|. .|++||+.+++
T Consensus 156 ~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~ 235 (719)
T 1z68_A 156 NGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPA 235 (719)
T ss_dssp ESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHH
T ss_pred cccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCC
Confidence 0111 1235799999999998877542 78899998876
Q ss_pred eeEEEEeC-----CCCCCcceEEEEcCCCcEEEEecCC----CcEEEEe----cCCCceeeee----eccCCCCc-----
Q 036585 207 LLSTYNVK-----PVSRNSTLEASFSPEGMFVISGSGD----GSVHAWS----VRSGKEVASW----MSFDTEPP----- 264 (304)
Q Consensus 207 ~~~~~~~~-----~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~v~d----~~~~~~~~~~----~~~~~~i~----- 264 (304)
....+... ..+...+..++||||++++++.... ..|.+|| +.+++....+ ..|...+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 315 (719)
T 1z68_A 236 YVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVS 315 (719)
T ss_dssp HHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCC
T ss_pred ccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCC
Confidence 53111111 1366778999999998877774322 2488999 8777766555 46777777
Q ss_pred eEEeCCCCcEEEE--ecCc----eEEeccCCccccccc
Q 036585 265 VIKWAPGSLMFVT--GSSE----LSFWIPDLSKLGAYV 296 (304)
Q Consensus 265 ~~~~~~~~~~l~s--~~~d----~~iw~~~~~~~~~~~ 296 (304)
.+.|+|||+.++. ...+ +.+|+.+..+...+.
T Consensus 316 ~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt 353 (719)
T 1z68_A 316 TPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQIT 353 (719)
T ss_dssp CCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECS
T ss_pred ccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecc
Confidence 8999999986554 3333 444555444444443
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.93 E-value=4.9e-23 Score=165.09 Aligned_cols=229 Identities=11% Similarity=-0.006 Sum_probs=170.8
Q ss_pred eeeEeecccCcEEE-EeeCCCeEEEEecCCcceeeeeccc------ccceeEEEEccCCCeEEEEecCCCC---------
Q 036585 18 EEILQSMEVGIYLV-TASDDESIRLYDVTAATCLKTINSK------KYGVDLVCFTSHPTTVIYSSKNGWD--------- 81 (304)
Q Consensus 18 ~~~i~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~~~~d--------- 81 (304)
...+.++++|++++ +...++.|.+||+.+++.+..+..+ ...+..++|+|++++++++.. +
T Consensus 45 ~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~---~~~~~~~~~~ 121 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVN---PTQRLNDHYV 121 (349)
T ss_dssp SCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEE---EEEECSSCEE
T ss_pred CceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcc---cccccccccc
Confidence 45688999998655 5557899999999999887776633 234789999999999999985 5
Q ss_pred ---CceEEEEccCceee---eecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEec-----------
Q 036585 82 ---ESLRLLSLHDNKYS---RYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG----------- 144 (304)
Q Consensus 82 ---~~i~vwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~----------- 144 (304)
+.|.+||+.+++.. ..+. +...+.+++|+|+++ +++++. .|++||+.+++....+....
T Consensus 122 ~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (349)
T 1jmx_B 122 VKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDV 197 (349)
T ss_dssp ECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBC
T ss_pred cCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccc
Confidence 89999999985433 3333 344688899999999 555543 49999999887665543221
Q ss_pred ---------------cceeEecCCC-----------e--EEEecCCCeEEEEecCCCCCceEEEEec-CCcEEEEeeCCC
Q 036585 145 ---------------RPAAAYDDQG-----------L--VFGYEKGPLDIFSVGGDISDANVVKFSN-DGRLMLLTTMEG 195 (304)
Q Consensus 145 ---------------~~~~~~~~~~-----------~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg 195 (304)
...+.+.+++ . .+....+.+..+.+......+..++|+| ++++++++ ++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~ 275 (349)
T 1jmx_B 198 LYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LN 275 (349)
T ss_dssp CCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ES
T ss_pred eeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cC
Confidence 0011122111 0 1233456667777766677888999999 99999888 88
Q ss_pred eEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeecc
Q 036585 196 HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSF 259 (304)
Q Consensus 196 ~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~ 259 (304)
.|.+||+.+++....+. ....+..++|+|++++|++++.++.|++||+++++.+..+...
T Consensus 276 ~v~~~d~~~~~~~~~~~----~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 276 RLAKYDLKQRKLIKAAN----LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEEEETTTTEEEEEEE----CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred eEEEEECccCeEEEEEc----CCCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 99999999999888876 3345778999999999988888999999999999988877644
No 155
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.92 E-value=1.2e-23 Score=184.86 Aligned_cols=269 Identities=7% Similarity=0.042 Sum_probs=179.3
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccc-----eeEEEEccCCCeEEEEecCCCC---------C
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYG-----VDLVCFTSHPTTVIYSSKNGWD---------E 82 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~~~~d---------~ 82 (304)
+...+.|+++|++++++ |+.|++||+.+++....+.+|... ...++||||+++|++++. + +
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~---~~~~~r~~~~~ 92 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYN---YVKQWRHSYTA 92 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEE---EEECSSSCEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEEC---CeeeEEEccce
Confidence 44568999999999986 899999999999988777777532 234789999999999886 4 6
Q ss_pred ceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEec------------------
Q 036585 83 SLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQG------------------ 144 (304)
Q Consensus 83 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------------------ 144 (304)
.+.+||+.+++.. .+..|...+...+|||||+.|+.+ .++.|++||+.++..........
T Consensus 93 ~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~ 170 (740)
T 4a5s_A 93 SYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVF 170 (740)
T ss_dssp EEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTS
T ss_pred EEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhc
Confidence 6779999998855 466677889999999999999887 46899999998776443211000
Q ss_pred --cceeEecCCCeEEEe---cCCCeEEEEecC------CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCC---Cce--e
Q 036585 145 --RPAAAYDDQGLVFGY---EKGPLDIFSVGG------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR---GTL--L 208 (304)
Q Consensus 145 --~~~~~~~~~~~~~~~---~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~---~~~--~ 208 (304)
...+.|+|++..+.+ +...+.+|.+.. +...+..+.+.+.|.. ....+|++||+.+ ++. .
T Consensus 171 ~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 171 SAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp SSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSSCCCE
T ss_pred CCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCCcceE
Confidence 012446666643322 233344443321 1223344444444421 1122688999988 742 2
Q ss_pred EEEEeCC---CCCCcceEEEEcCCCcEEEEec----CCCcEEEEecCCCc----e--eeee--eccCCCCc-----eEEe
Q 036585 209 STYNVKP---VSRNSTLEASFSPEGMFVISGS----GDGSVHAWSVRSGK----E--VASW--MSFDTEPP-----VIKW 268 (304)
Q Consensus 209 ~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~----~dg~i~v~d~~~~~----~--~~~~--~~~~~~i~-----~~~~ 268 (304)
..+.... .+...+..++|+|||+.++... .+..|++||+.+++ + +..+ ..|...+. .+.|
T Consensus 247 ~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~f 326 (740)
T 4a5s_A 247 IQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHF 326 (740)
T ss_dssp EEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEE
T ss_pred EEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceE
Confidence 2232100 2667789999999999766543 33479999999887 2 2222 45666655 7899
Q ss_pred CCCCcEEE-EecCc-----eEEeccCCccccccc
Q 036585 269 APGSLMFV-TGSSE-----LSFWIPDLSKLGAYV 296 (304)
Q Consensus 269 ~~~~~~l~-s~~~d-----~~iw~~~~~~~~~~~ 296 (304)
+|||+.++ ..+.+ +.+|+.+......+.
T Consensus 327 spDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT 360 (740)
T 4a5s_A 327 TLDGNSFYKIISNEEGYRHICYFQIDKKDCTFIT 360 (740)
T ss_dssp CTTSSEEEEEEECTTSCEEEEEEETTCSSCEESC
T ss_pred cCCCCEEEEEEEcCCCceEEEEEECCCCceEecc
Confidence 99999877 56533 666777666555443
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=1.3e-23 Score=190.92 Aligned_cols=237 Identities=11% Similarity=0.031 Sum_probs=184.3
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCC-cceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeec
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTA-ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYF 98 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~ 98 (304)
.+.++++ .++++++.|+.++||.+.. +.....+..|. .+...+|+|+++.++++. ++.|++|++...+ +..+
T Consensus 208 ~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~~----~~~i~~~d~~~~~-l~~l 280 (1045)
T 1k32_A 208 SPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFSK----GGSIYIFNPDTEK-IEKI 280 (1045)
T ss_dssp EEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEEE----TTEEEEECTTTCC-EEEC
T ss_pred ceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEEe----CCEEEEecCCceE-eeee
Confidence 3455566 6777888889999998753 44455566555 467789999999999985 8999999995443 3344
Q ss_pred cc-----------ccccEEEEEEc-CCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEE
Q 036585 99 KG-----------HHDRVVLLSLC-SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDI 166 (304)
Q Consensus 99 ~~-----------~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (304)
.. |...+.+++|+ |+|+++++++ ++.+++|++..+.....
T Consensus 281 ~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~~--------------------------- 332 (1045)
T 1k32_A 281 EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV--------------------------- 332 (1045)
T ss_dssp CCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEEC---------------------------
T ss_pred ccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEEc---------------------------
Confidence 43 34578999999 9999888887 78999999887653321
Q ss_pred EEecCCCC-CceEEEEecCCcEEEEeeCCCeEE-EEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEE
Q 036585 167 FSVGGDIS-DANVVKFSNDGRLMLLTTMEGHIH-VLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHA 244 (304)
Q Consensus 167 ~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~-~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v 244 (304)
..+.. .+..++|+ +|+.++.++.++.+. +||+.+++... +. .+...+..++|+|||++|++++.++.|++
T Consensus 333 ---~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~---~~~~~~~~~~~SpDG~~la~~~~~~~v~~ 404 (1045)
T 1k32_A 333 ---PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FE---ENLGNVFAMGVDRNGKFAVVANDRFEIMT 404 (1045)
T ss_dssp ---SCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CC---CCCCSEEEEEECTTSSEEEEEETTSEEEE
T ss_pred ---cCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ec---CCccceeeeEECCCCCEEEEECCCCeEEE
Confidence 12334 67889999 999999998888899 99988766432 22 46678899999999999999999999999
Q ss_pred EecCCCceeeeeeccCCCCceEEeCCCCcEEEEecC------------ceEEeccCCccccccccCC
Q 036585 245 WSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSS------------ELSFWIPDLSKLGAYVGRN 299 (304)
Q Consensus 245 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~------------d~~iw~~~~~~~~~~~~~~ 299 (304)
||+.+++....+.+|...+.+++|+|||++|++++. .+++|+.+..++..+..+.
T Consensus 405 ~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~ 471 (1045)
T 1k32_A 405 VDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTEN 471 (1045)
T ss_dssp EETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSS
T ss_pred EECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCC
Confidence 999999887777789999999999999999987754 2888988776665555443
No 157
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=6.8e-22 Score=157.42 Aligned_cols=248 Identities=10% Similarity=0.074 Sum_probs=169.0
Q ss_pred eEeecccCcEEEEeeC-CCeEEEEecCCcce-eeeecccccceeEEEEccCCCeEEEEecCCCC-C--ceEEEEccCcee
Q 036585 20 ILQSMEVGIYLVTASD-DESIRLYDVTAATC-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD-E--SLRLLSLHDNKY 94 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~-d~~i~vw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d-~--~i~vwd~~~~~~ 94 (304)
.+.++++|+++++++. ++.|.+||..+++. ...+..+..+..+++|+|+++++++... + + .|.+||+.+++.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~---~~~~~~i~v~d~~~~~~ 120 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTG---LNHPFNMQSYSFLKNKF 120 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCC---SSSSCEEEEEETTTTEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecC---CCCcccEEEEECCCCCe
Confidence 7889999997776665 88999999999887 7777777666655999999999995443 3 3 899999999988
Q ss_pred eeecccccccEEEEEEcCCCCEEEEc-ccCCe-EEEEeCCcceeeceE-----EE-eccceeEecCCCe-EE-Ee-cCCC
Q 036585 95 SRYFKGHHDRVVLLSLCSSKDCFISG-SLDRT-VLLWDQRAEKCQGLL-----RV-QGRPAAAYDDQGL-VF-GY-EKGP 163 (304)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~iwd~~~~~~~~~~-----~~-~~~~~~~~~~~~~-~~-~~-~~~~ 163 (304)
+..+.. .....+++|+|++++++++ ..++. +.+|++......... .. .....+.+++++. ++ .. .++.
T Consensus 121 ~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 199 (331)
T 3u4y_A 121 ISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS 199 (331)
T ss_dssp EEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred EEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe
Confidence 877764 3456899999999855554 45577 999998754332111 10 1233567888885 33 22 3566
Q ss_pred eEEEEecCCC-----------CCceEEEEecCCcEEEEee-CCCeEEEEEcCCCce--eEEEEeC----CCCCCcceEEE
Q 036585 164 LDIFSVGGDI-----------SDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTL--LSTYNVK----PVSRNSTLEAS 225 (304)
Q Consensus 164 ~~~~~~~~~~-----------~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~--~~~~~~~----~~~~~~i~~~~ 225 (304)
+.+|++.... ..+..++|+|+|+++++++ .++.|.+||+.+++. +..+... .........++
T Consensus 200 v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (331)
T 3u4y_A 200 IGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMA 279 (331)
T ss_dssp EEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEE
T ss_pred EEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceE
Confidence 7778765322 3457799999999776654 577899999998877 3333321 11111224589
Q ss_pred EcCCCcEEEEec-CCCcEEEEecCCCceeeeeeccCCCCceEEeCCCC
Q 036585 226 FSPEGMFVISGS-GDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGS 272 (304)
Q Consensus 226 ~s~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 272 (304)
|+||+++|++++ .++.|.+||+.+.. +..+......-....++|+.
T Consensus 280 ~spdg~~l~v~~~~~~~v~v~d~~~~~-~~~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 280 LNKTETKLFISANISRELKVFTISGKV-VGYVAGIEANGGIAICHPDK 326 (331)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTSCE-EEECTTCCCBSCEEECCCC-
T ss_pred ECCCCCEEEEecCCCCcEEEEEecCCc-ccceecccccCCeEEECCcc
Confidence 999999886554 56799999997644 33333333332334455554
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=4.1e-23 Score=168.13 Aligned_cols=266 Identities=11% Similarity=0.087 Sum_probs=183.1
Q ss_pred EeecccCcEEEEeeC-CC--eEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 21 LQSMEVGIYLVTASD-DE--SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 21 i~~~~~~~~l~~~~~-d~--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
..++|||++|+.++. ++ .|.+||+.+++......++...+..+.|+|+++.|+++.. ++.|++||+.+++....
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~---~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD---GRNLMRVDLATLEENVV 117 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET---TTEEEEEETTTCCEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC---CCeEEEEECCCCcceee
Confidence 568999999998887 66 4888899988887777777666667889999999999997 88999999999887666
Q ss_pred cccccccEEEEE--EcCCCCEEEE----------------------cccCCeEEEEeCCcceeeceEEEec-cceeEecC
Q 036585 98 FKGHHDRVVLLS--LCSSKDCFIS----------------------GSLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYDD 152 (304)
Q Consensus 98 ~~~~~~~v~~~~--~~~~~~~l~~----------------------~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~ 152 (304)
+..+...+.... ++|++++++. ...+..|.+||+.+++......... .....++|
T Consensus 118 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 118 YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRP 197 (388)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEET
T ss_pred eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECC
Confidence 665555554444 4899988873 2345789999999887655443332 23567888
Q ss_pred -CCeEEE--ecC------CCeEEEEecC--------CC--CCceEEEEecCCcEEEEeeC-CC----eEEEEEcCCCcee
Q 036585 153 -QGLVFG--YEK------GPLDIFSVGG--------DI--SDANVVKFSNDGRLMLLTTM-EG----HIHVLDSFRGTLL 208 (304)
Q Consensus 153 -~~~~~~--~~~------~~~~~~~~~~--------~~--~~v~~~~~~~~~~~l~~~~~-dg----~i~~~d~~~~~~~ 208 (304)
++..+. ... ..+.+++..+ +. ..+..++|+|||+.|+..+. ++ .|++||+.+++..
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENR 277 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEE
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceE
Confidence 775432 221 2444444332 11 13667899999997765443 22 4999999988754
Q ss_pred EEEEeCCCCC---CcceEEEEcCCCcEEEEe---------cCCCcEEEEecCCCceeeeeeccCC-----------CCce
Q 036585 209 STYNVKPVSR---NSTLEASFSPEGMFVISG---------SGDGSVHAWSVRSGKEVASWMSFDT-----------EPPV 265 (304)
Q Consensus 209 ~~~~~~~~~~---~~i~~~~~s~~~~~l~~~---------~~dg~i~v~d~~~~~~~~~~~~~~~-----------~i~~ 265 (304)
...... ... .....++|+|||+.|+.. ..+..|++||+.+++. ..+..+.. .+..
T Consensus 278 ~l~~~~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~ 355 (388)
T 3pe7_A 278 QLTSMP-ACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPH 355 (388)
T ss_dssp EEEEEC-CEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCC
T ss_pred EEEcCC-CceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCC
Confidence 433311 100 001223799999988754 4466899999988764 45555655 5788
Q ss_pred EEeCCCCcEEEEecCc---eEEeccCCcc
Q 036585 266 IKWAPGSLMFVTGSSE---LSFWIPDLSK 291 (304)
Q Consensus 266 ~~~~~~~~~l~s~~~d---~~iw~~~~~~ 291 (304)
++|+|||+.|+.++.. ..||.++...
T Consensus 356 ~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 356 PSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp CEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred ccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 9999999988877654 7788776543
No 159
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.91 E-value=6e-22 Score=159.30 Aligned_cols=241 Identities=10% Similarity=0.101 Sum_probs=172.8
Q ss_pred ccCcEEEEee------CCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEec-------CCCCCceEEEEccC
Q 036585 25 EVGIYLVTAS------DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSK-------NGWDESLRLLSLHD 91 (304)
Q Consensus 25 ~~~~~l~~~~------~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------~~~d~~i~vwd~~~ 91 (304)
++++++++.. .|+.|.+||..+++.+.++..+..+ .++|+|++++++++.. +..++.|.+||..+
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t 90 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADK 90 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTT
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcC
Confidence 4667766654 3679999999999998888776655 8999999999999862 01167899999998
Q ss_pred ceeeeecccc------cccEEEEEEcCCCCEEEEccc--CCeEEEEeCCcceeece-EEEecc-----------ceeEec
Q 036585 92 NKYSRYFKGH------HDRVVLLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGL-LRVQGR-----------PAAAYD 151 (304)
Q Consensus 92 ~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~-----------~~~~~~ 151 (304)
.+.+..+... ......++++|+|++|+++.. ++.|.+||+++++.... +..... ..+...
T Consensus 91 ~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 91 LTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTIC 170 (361)
T ss_dssp CCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEE
T ss_pred CcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEEC
Confidence 8877766532 234567899999999998864 57999999998876654 221110 112222
Q ss_pred CCCeEE----------------------------------------EecCCCeEEEEecCCC------------------
Q 036585 152 DQGLVF----------------------------------------GYEKGPLDIFSVGGDI------------------ 173 (304)
Q Consensus 152 ~~~~~~----------------------------------------~~~~~~~~~~~~~~~~------------------ 173 (304)
+++.+. ....+.+.++++....
T Consensus 171 ~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
T 2oiz_A 171 GDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKN 250 (361)
T ss_dssp TTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTT
T ss_pred CCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccc
Confidence 222111 1111223333332111
Q ss_pred ---CCceEEEEecCCcEEEEeeC-----------CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC
Q 036585 174 ---SDANVVKFSNDGRLMLLTTM-----------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD 239 (304)
Q Consensus 174 ---~~v~~~~~~~~~~~l~~~~~-----------dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 239 (304)
.....++|+|+++.++++.. .+.|.+||+.+++.+.++.. +. ...++|+|||++|++++.
T Consensus 251 ~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~---~~--p~~ia~spdg~~l~v~n~- 324 (361)
T 2oiz_A 251 WVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG---RD--ALSMTIDQQRNLMLTLDG- 324 (361)
T ss_dssp CEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC---TT--CCEEEEETTTTEEEEECS-
T ss_pred cccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec---CC--eeEEEECCCCCEEEEeCC-
Confidence 11123789999888777643 34899999999999999883 33 889999999999999887
Q ss_pred CcEEEEecCCC--ceeeeeeccCCCCceEEeCCCCc
Q 036585 240 GSVHAWSVRSG--KEVASWMSFDTEPPVIKWAPGSL 273 (304)
Q Consensus 240 g~i~v~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~ 273 (304)
+.|.+||+.++ +.+..+..+......++++|+|+
T Consensus 325 ~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 325 GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99999999999 88888766777889999999985
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=1.4e-21 Score=156.68 Aligned_cols=235 Identities=11% Similarity=0.105 Sum_probs=153.4
Q ss_pred CCCeEEEEecC--Ccceee-eecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCce--eeeecccccccEEEEE
Q 036585 35 DDESIRLYDVT--AATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK--YSRYFKGHHDRVVLLS 109 (304)
Q Consensus 35 ~d~~i~vw~~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~--~~~~~~~~~~~v~~~~ 109 (304)
.++.|.+|+++ +++... ....+...+..++|+|+++ |++++..+.++.|++|++.+++ .+..+..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 34567777665 454432 2334556788899999999 6666541125899999998765 3444445677888999
Q ss_pred EcCCCCEEEEcc-cCCeEEEEeCCcceeeceEE-EeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcE
Q 036585 110 LCSSKDCFISGS-LDRTVLLWDQRAEKCQGLLR-VQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRL 187 (304)
Q Consensus 110 ~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 187 (304)
|+|++++|++++ .++.+.+|++........+. ...... .+. .......+.+++|+|+|++
T Consensus 93 ~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~---~p~---------------~~~~~~~~~~~~~spdg~l 154 (347)
T 3hfq_A 93 VDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH---GPR---------------PEQDGSHIHYTDLTPDNRL 154 (347)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC---CSS---------------TTCSSCCEEEEEECTTSCE
T ss_pred ECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC---CCC---------------ccccCCCceEEEECCCCcE
Confidence 999999888877 78999999996322221111 100000 000 0012235778999999996
Q ss_pred EEEeeCCCeEEEEEcC-CCceeEEEEeCCCCCCcceEEEEcCCCcEEEE-ecCCCcEEEEecCC--Cce--eeeeeccC-
Q 036585 188 MLLTTMEGHIHVLDSF-RGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS-GSGDGSVHAWSVRS--GKE--VASWMSFD- 260 (304)
Q Consensus 188 l~~~~~dg~i~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~i~v~d~~~--~~~--~~~~~~~~- 260 (304)
+++...++.|++|++. +++.................++|+|||+++++ ...++.|.+|++.. ++. +..+....
T Consensus 155 ~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~ 234 (347)
T 3hfq_A 155 AVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPA 234 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCT
T ss_pred EEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCC
Confidence 6666678899999998 55543322211123346678999999997665 56788999999874 443 22332222
Q ss_pred -----CCCceEEeCCCCcEEEEec-Cc--eEEeccC
Q 036585 261 -----TEPPVIKWAPGSLMFVTGS-SE--LSFWIPD 288 (304)
Q Consensus 261 -----~~i~~~~~~~~~~~l~s~~-~d--~~iw~~~ 288 (304)
..+..++|+|||++|+++. .+ +.+|+++
T Consensus 235 ~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 235 DYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp TCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 3477899999999875443 33 9999986
No 161
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=4.8e-22 Score=155.45 Aligned_cols=207 Identities=12% Similarity=0.117 Sum_probs=155.2
Q ss_pred CCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCc-ceeeceEEEe---ccceeEecCCCe
Q 036585 80 WDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLRVQ---GRPAAAYDDQGL 155 (304)
Q Consensus 80 ~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~---~~~~~~~~~~~~ 155 (304)
.|+.|++||+.+++... +..|...+.+++|+|++++|++++ ++.|++||+.+ ++........ ....+.+++++.
T Consensus 20 ~~~~i~~~d~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 97 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRV-VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA 97 (297)
T ss_dssp CCEEEEEEETTTTEEEE-EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS
T ss_pred cceeEEEEeCCCCceee-eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCC
Confidence 49999999999988664 445888999999999999999876 78999999998 6655444322 223477888885
Q ss_pred EEEecC----CCeEEEEecC---------CCCCceEEEEecCCcEEE-EeeCCCeEEEEEcC--CCceeEEEEeCCCCCC
Q 036585 156 VFGYEK----GPLDIFSVGG---------DISDANVVKFSNDGRLML-LTTMEGHIHVLDSF--RGTLLSTYNVKPVSRN 219 (304)
Q Consensus 156 ~~~~~~----~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~-~~~~dg~i~~~d~~--~~~~~~~~~~~~~~~~ 219 (304)
.+.... +...+|.+.. ....+..++|+|++++|+ ++..++.+++|++. +++. ..+. .+..
T Consensus 98 ~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~---~~~~ 173 (297)
T 2ojh_A 98 LYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLT---HGEG 173 (297)
T ss_dssp EEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EECC---CSSS
T ss_pred EEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEcc---cCCC
Confidence 543322 4566666532 223477889999999887 67789999999864 3333 2222 4667
Q ss_pred cceEEEEcCCCcEEEEec-CCCcEEEEecC-CCceeeeeeccCCCCceEEeCCCCcEEEEecCc-------------eEE
Q 036585 220 STLEASFSPEGMFVISGS-GDGSVHAWSVR-SGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE-------------LSF 284 (304)
Q Consensus 220 ~i~~~~~s~~~~~l~~~~-~dg~i~v~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-------------~~i 284 (304)
.+.+++|+|++++|+.++ .++.+++|++. .+..+..+..|...+..++|+|++++|++++.+ +.+
T Consensus 174 ~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 174 RNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEE
T ss_pred ccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEE
Confidence 899999999999887665 58899999986 566677777788889999999999998887753 777
Q ss_pred eccCCccc
Q 036585 285 WIPDLSKL 292 (304)
Q Consensus 285 w~~~~~~~ 292 (304)
|+.+..+.
T Consensus 254 ~d~~~~~~ 261 (297)
T 2ojh_A 254 MDMDGGNV 261 (297)
T ss_dssp EETTSCSC
T ss_pred EecCCCCc
Confidence 77766544
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=2.5e-22 Score=171.93 Aligned_cols=223 Identities=8% Similarity=0.039 Sum_probs=162.1
Q ss_pred eeEeecccCcEEEEeeC---CCeEEEEecCC---cceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCc
Q 036585 19 EILQSMEVGIYLVTASD---DESIRLYDVTA---ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN 92 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~---d~~i~vw~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~ 92 (304)
..+.|+|+ +++++++. +...++|.+.. +... .+.... .+...+|+|+++.++..+.. ++.+.+||+.++
T Consensus 68 ~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~--~~~~~l~d~~~g 142 (582)
T 3o4h_A 68 LDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGAT--EDRVALYALDGG 142 (582)
T ss_dssp CEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEEC--SSCEEEEEEETT
T ss_pred ccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecC--CCCceEEEccCC
Confidence 34678888 77777765 45566665533 2222 333222 34467899998764444322 556669999998
Q ss_pred eeeeecccccccEEEEEEcCCCCEEEEcccC----CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEE
Q 036585 93 KYSRYFKGHHDRVVLLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFS 168 (304)
Q Consensus 93 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (304)
+...... +.. .+++|+|||+++++++.+ +.|++||+.+++....
T Consensus 143 ~~~~l~~-~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l----------------------------- 190 (582)
T 3o4h_A 143 GLRELAR-LPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF----------------------------- 190 (582)
T ss_dssp EEEEEEE-ESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE-----------------------------
T ss_pred cEEEeec-CCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe-----------------------------
Confidence 7655544 333 789999999999988777 7899999988765421
Q ss_pred ecCCCCCceEEEEecCCcEEEEeeCCC--eEEEEEcCCCceeEEEEeCCCCCCcceEEE--------EcCCCcEEEEecC
Q 036585 169 VGGDISDANVVKFSNDGRLMLLTTMEG--HIHVLDSFRGTLLSTYNVKPVSRNSTLEAS--------FSPEGMFVISGSG 238 (304)
Q Consensus 169 ~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~--------~s~~~~~l~~~~~ 238 (304)
..+...+..++|+|||+.|+++..++ .|++||+.+++.. .+. .+...+..++ |+|||.++++++.
T Consensus 191 -~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 191 -DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE---LPSKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp -CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC---CSCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred -ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc---CCCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 13556678899999999999888888 8999999988876 433 4566666667 9999988999999
Q ss_pred CCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc---eEEeccCC
Q 036585 239 DGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE---LSFWIPDL 289 (304)
Q Consensus 239 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d---~~iw~~~~ 289 (304)
|+.+++|++ ++... .+.+.+.+++|+ +++++++++.+ ..+|.++.
T Consensus 266 ~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 266 EGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp TTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred CCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 999999999 65544 234678899999 99999888776 55665554
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.89 E-value=1.9e-20 Score=148.88 Aligned_cols=249 Identities=10% Similarity=0.080 Sum_probs=179.7
Q ss_pred ceeeEeecccCcEEEEeeCC------------------------CeEEEEecCCcceeeeec-ccccceeEEEEccCCCe
Q 036585 17 SEEILQSMEVGIYLVTASDD------------------------ESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSHPTT 71 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d------------------------~~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 71 (304)
....+.+.++|+++++...+ +.|.+||..+++.+..+. .+...+..++++|+++.
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l 104 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNY 104 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCE
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCCE
Confidence 45568899999999888877 479999998888876654 34457889999999997
Q ss_pred EEEEecCCCCCceEEEEccCce-eeeec---------ccccccEEEEEEcC-CCCEEEEcc-cCCeEEEEeCCcceeece
Q 036585 72 VIYSSKNGWDESLRLLSLHDNK-YSRYF---------KGHHDRVVLLSLCS-SKDCFISGS-LDRTVLLWDQRAEKCQGL 139 (304)
Q Consensus 72 l~~~~~~~~d~~i~vwd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~~~~~~ 139 (304)
+++... ++.|++||..... .+..+ ..+......++++| ++.++++.+ .++.|++||. ++.....
T Consensus 105 ~v~d~~---~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~ 180 (329)
T 3fvz_A 105 WVTDVA---LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQ 180 (329)
T ss_dssp EEEETT---TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEE
T ss_pred EEEECC---CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEE
Confidence 777666 8999999986542 34444 23445689999999 788888876 6899999994 4544443
Q ss_pred EEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecC-CcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCC
Q 036585 140 LRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSR 218 (304)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~ 218 (304)
+...+.... ...++......++++|+ +.++++...++.|++||..+++.+..+... ...
T Consensus 181 ~~~~g~~~~-------------------~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~-~~~ 240 (329)
T 3fvz_A 181 WGEESSGSS-------------------PRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA-SFG 240 (329)
T ss_dssp ECEECCSSS-------------------CCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT-TTT
T ss_pred eccCCCCCC-------------------CCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc-ccC
Confidence 322111000 00011234678999998 777777778899999999889888877533 355
Q ss_pred CcceEEEEcC------CCcEEEEecCCCcEEEEecCCCceeeee---eccCCCCceEEeCCCCcEEEEecCc--eEEecc
Q 036585 219 NSTLEASFSP------EGMFVISGSGDGSVHAWSVRSGKEVASW---MSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIP 287 (304)
Q Consensus 219 ~~i~~~~~s~------~~~~l~~~~~dg~i~v~d~~~~~~~~~~---~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~ 287 (304)
..+..++|+| +++..++...+..|++||+.+++.+..+ ..+...+..|+++|+|.++++...+ |++|+.
T Consensus 241 ~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 241 RNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp TCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred CCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 6788899999 3333333344568999999999988877 3566778999999999777777666 777766
Q ss_pred CC
Q 036585 288 DL 289 (304)
Q Consensus 288 ~~ 289 (304)
+.
T Consensus 321 ~~ 322 (329)
T 3fvz_A 321 TE 322 (329)
T ss_dssp EE
T ss_pred Cc
Confidence 54
No 164
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.89 E-value=8.3e-20 Score=143.10 Aligned_cols=235 Identities=13% Similarity=0.079 Sum_probs=169.6
Q ss_pred eeeEeecccCc-EEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 18 EEILQSMEVGI-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 18 ~~~i~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
.+.+.+.++|+ +++++..++.|..|+..++ ...+..+...+.+++++++++.+++... ++.|.+||..+++...
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~---~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHG---LRRLERQREPGGEWES 104 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETT---TTEEEEECSTTCCEEE
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecC---CCeEEEEcCCCCcEEE
Confidence 45688899998 7888888999999999876 5666667778999999999997776655 7899999998876543
Q ss_pred ecccc----cccEEEEEEcCCCCEEEE----ccc-------------CCeEEEEeCCcceeeceEEEeccceeEecCCCe
Q 036585 97 YFKGH----HDRVVLLSLCSSKDCFIS----GSL-------------DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGL 155 (304)
Q Consensus 97 ~~~~~----~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (304)
..... ...+..++++|+|+++++ ++. .+.|..++.. ++.. .+.
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~-------------- 168 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-API-------------- 168 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEE--------------
T ss_pred EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-Eee--------------
Confidence 33221 124567999999998887 431 2355555544 2221 111
Q ss_pred EEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcC-CCce---eEEEEeCCCCCCcceEEEEcCCCc
Q 036585 156 VFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF-RGTL---LSTYNVKPVSRNSTLEASFSPEGM 231 (304)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~-~~~~---~~~~~~~~~~~~~i~~~~~s~~~~ 231 (304)
.+......++|+|+++.+++.+.++.|++||+. +++. ...+ ......+..++++++|+
T Consensus 169 ---------------~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~---~~~~~~p~~i~~d~~G~ 230 (296)
T 3e5z_A 169 ---------------RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF---TVEPGKTDGLRVDAGGL 230 (296)
T ss_dssp ---------------CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE---CCSSSCCCSEEEBTTSC
T ss_pred ---------------cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe---eCCCCCCCeEEECCCCC
Confidence 233456789999999988777778999999987 5554 2223 23455667899999998
Q ss_pred EEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEe-CCCCcEEEEecCc-eEEeccCCcccccc
Q 036585 232 FVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKW-APGSLMFVTGSSE-LSFWIPDLSKLGAY 295 (304)
Q Consensus 232 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~-~~~~~~l~s~~~d-~~iw~~~~~~~~~~ 295 (304)
++++. ++.|.+||.. ++.+..+..+.. +++++| +|+++.|++++.+ +.-++++..+++..
T Consensus 231 l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~~~~~ 292 (296)
T 3e5z_A 231 IWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRGLEHH 292 (296)
T ss_dssp EEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCBCCC-
T ss_pred EEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccccccccc
Confidence 76666 7889999985 778888877777 999999 6899888888777 44445555555543
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.89 E-value=3.8e-22 Score=174.97 Aligned_cols=242 Identities=10% Similarity=0.085 Sum_probs=162.1
Q ss_pred eeeEeecccCcEEEEeeC---------CCeEEEEecCCccee--eeecccccceeEEEEccCCCeEEEEecCCCCCceEE
Q 036585 18 EEILQSMEVGIYLVTASD---------DESIRLYDVTAATCL--KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 86 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~---------d~~i~vw~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~v 86 (304)
...+.++|||++|++++. ++.|++||+.+++.+ ..+ ...+..++|||||+.|+++. ++.|++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~----~~~i~~ 134 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY----QNNIYL 134 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE----TTEEEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE----CCeEEE
Confidence 456889999999999876 789999999988763 223 24688999999999999986 889999
Q ss_pred EEccCceeeeec-ccccccE-----------------EEEEEcCCCCEEEEcccCC------------------------
Q 036585 87 LSLHDNKYSRYF-KGHHDRV-----------------VLLSLCSSKDCFISGSLDR------------------------ 124 (304)
Q Consensus 87 wd~~~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~l~~~~~dg------------------------ 124 (304)
|++.+++..+.. .++...| .+++|+|||++|++++.|.
T Consensus 135 ~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~y 214 (719)
T 1z68_A 135 KQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPY 214 (719)
T ss_dssp ESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEEC
T ss_pred EeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecC
Confidence 999888765433 2333223 4899999999999987652
Q ss_pred ----------eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCC
Q 036585 125 ----------TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTME 194 (304)
Q Consensus 125 ----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 194 (304)
.|++||+.+++....+..... ..+.++...+..++|+||++++++....
T Consensus 215 p~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~SpD~~~~~~~~~~ 273 (719)
T 1z68_A 215 PKAGAKNPVVRIFIIDTTYPAYVGPQEVPVP---------------------AMIASSDYYFSWLTWVTDERVCLQWLKR 273 (719)
T ss_dssp CBTTSCCCEEEEEEEESSCHHHHCCEECCCC---------------------HHHHTSCEEEEEEEESSSSEEEEEEEES
T ss_pred CCCCCCCCeeEEEEEECCCCCccceeEccCC---------------------ccCCCCcceEEEeEEeCCCeEEEEEecc
Confidence 455566555443100110000 0011355567899999998877764432
Q ss_pred ----CeEEEEE----cCCCceeEEEE-eCCCCCCcce-----EEEEcCCCcEEEE--ecCCC--cEEEEecCCCceeeee
Q 036585 195 ----GHIHVLD----SFRGTLLSTYN-VKPVSRNSTL-----EASFSPEGMFVIS--GSGDG--SVHAWSVRSGKEVASW 256 (304)
Q Consensus 195 ----g~i~~~d----~~~~~~~~~~~-~~~~~~~~i~-----~~~~s~~~~~l~~--~~~dg--~i~v~d~~~~~~~~~~ 256 (304)
..|.+|| +.+++....+. ....+...+. .+.|+|||+.|+. ...+| .|++||+.+++ ...+
T Consensus 274 ~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~l 352 (719)
T 1z68_A 274 VQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQI 352 (719)
T ss_dssp STTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEEC
T ss_pred ccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEec
Confidence 3588999 77776554441 0013455555 7899999996554 44555 57778877666 4555
Q ss_pred eccCCCCceEEeCCCCcEEEE-ecC----c--eEEeccCC
Q 036585 257 MSFDTEPPVIKWAPGSLMFVT-GSS----E--LSFWIPDL 289 (304)
Q Consensus 257 ~~~~~~i~~~~~~~~~~~l~s-~~~----d--~~iw~~~~ 289 (304)
..+...+..+.++ +++.++. +.. + .++|.++.
T Consensus 353 t~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 353 TSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred ccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 5566667777777 6665554 443 2 88998765
No 166
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=8.2e-20 Score=147.21 Aligned_cols=214 Identities=12% Similarity=0.134 Sum_probs=145.8
Q ss_pred cCcEEEEee-CCCeEEEEecCCcceeeeec------c--------cccceeEEEEccCCCeEEEEecCCCCCceEEEEcc
Q 036585 26 VGIYLVTAS-DDESIRLYDVTAATCLKTIN------S--------KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH 90 (304)
Q Consensus 26 ~~~~l~~~~-~d~~i~vw~~~~~~~~~~~~------~--------~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~ 90 (304)
++++|++++ .++.|.+|++.+...+..+. + +...+.+++|+|++++++++... ++.|.+|++.
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~v~v~~~~ 185 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG--TDQIHKFNIN 185 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT--TTEEEEEEEC
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC--CCEEEEEEEc
Confidence 788777776 57899999997543332221 1 12235789999999988777653 8899999987
Q ss_pred Ccee------e-------eecccccccEEEEEEcCCCCEEEEcc-cCCeEEEEeCCcceeeceEEEeccceeEecCCCeE
Q 036585 91 DNKY------S-------RYFKGHHDRVVLLSLCSSKDCFISGS-LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLV 156 (304)
Q Consensus 91 ~~~~------~-------~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
.... + .....+...+..++|+|+++++++++ .++.|.+||+.+++..........
T Consensus 186 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~----------- 254 (361)
T 3scy_A 186 PNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD----------- 254 (361)
T ss_dssp TTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC-----------
T ss_pred CCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC-----------
Confidence 5431 1 11122345678999999999877766 689999999986644322221110
Q ss_pred EEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCC--CeEEEEEcC--CCce--eEEEEeCCCCCCcceEEEEcCCC
Q 036585 157 FGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTME--GHIHVLDSF--RGTL--LSTYNVKPVSRNSTLEASFSPEG 230 (304)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~~~d~~--~~~~--~~~~~~~~~~~~~i~~~~~s~~~ 230 (304)
..+......++|+|+|++|+++..+ +.|.+|++. +++. +..+. . ...+..++|+|||
T Consensus 255 -------------~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~---~-g~~~~~~~~spdg 317 (361)
T 3scy_A 255 -------------TVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL---T-GIHPRNFIITPNG 317 (361)
T ss_dssp -------------SSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE---C-SSCCCEEEECTTS
T ss_pred -------------CCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec---C-CCCCceEEECCCC
Confidence 1122345789999999998777654 899999985 4553 33333 2 4567889999999
Q ss_pred cEEEEec-CCCcEEEE--ecCCCceeeee-eccCCCCceEEeC
Q 036585 231 MFVISGS-GDGSVHAW--SVRSGKEVASW-MSFDTEPPVIKWA 269 (304)
Q Consensus 231 ~~l~~~~-~dg~i~v~--d~~~~~~~~~~-~~~~~~i~~~~~~ 269 (304)
++|++++ .++.|.+| |..+++..... ..+...+.|+.|.
T Consensus 318 ~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 318 KYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp CEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 9888887 67889996 44566654433 2345568888885
No 167
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.88 E-value=7.7e-20 Score=146.54 Aligned_cols=257 Identities=9% Similarity=0.065 Sum_probs=175.9
Q ss_pred cCcEEEEee---------CCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCC--CCCceEEEEccCcee
Q 036585 26 VGIYLVTAS---------DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDNKY 94 (304)
Q Consensus 26 ~~~~l~~~~---------~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~vwd~~~~~~ 94 (304)
+|++++... .++.|.+||+.+++... + ..+..++|+|+|+.|++.+..+ ....|.+|++.+++.
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~ 97 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSS 97 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCce
Confidence 888887653 25679999998876533 3 4688899999999999887521 123488889888876
Q ss_pred eeecccccccEEEEEEcCCCCEEEEcccC---------------------------CeEEEEeCCcceeeceEEEeccce
Q 036585 95 SRYFKGHHDRVVLLSLCSSKDCFISGSLD---------------------------RTVLLWDQRAEKCQGLLRVQGRPA 147 (304)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------g~i~iwd~~~~~~~~~~~~~~~~~ 147 (304)
..... +.. +..+.|+|+++.|+.++.+ ..|++||+.+++....+.......
T Consensus 98 ~~l~~-~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~ 175 (347)
T 2gop_A 98 KKILE-AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSS 175 (347)
T ss_dssp EEEEE-ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCE
T ss_pred EEEEc-CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCccc
Confidence 55544 334 9999999999988887642 579999998887633333234456
Q ss_pred eEecCCCeEEEecC-------C-CeEEEEecCCCCC-------ceEEEEecCCcEEEEeeCC--------CeEEEEEcCC
Q 036585 148 AAYDDQGLVFGYEK-------G-PLDIFSVGGDISD-------ANVVKFSNDGRLMLLTTME--------GHIHVLDSFR 204 (304)
Q Consensus 148 ~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~-------v~~~~~~~~~~~l~~~~~d--------g~i~~~d~~~ 204 (304)
+.+++++.++.... . ...+|.+. .+. .....++|+|+.|+.++.+ ..|.+|| +
T Consensus 176 ~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~ 251 (347)
T 2gop_A 176 GIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--G 251 (347)
T ss_dssp EEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--S
T ss_pred ccCCCCeEEEEEecccccccccccccEEEeC--CCceEEeccCcceeeECCCCCEEEEEEccccCCccccceEEEEC--C
Confidence 77888883333321 1 33555543 111 1122349999988877644 4688888 5
Q ss_pred CceeEEEEeCCCCCCcceE-EEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--
Q 036585 205 GTLLSTYNVKPVSRNSTLE-ASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE-- 281 (304)
Q Consensus 205 ~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-- 281 (304)
++..... ..+...+.. +.|+ |+ ++++++.++.+++| +.+++. ..+..+...|.+++|+| .++++++.+
T Consensus 252 ~~~~~l~---~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~ 322 (347)
T 2gop_A 252 KEVMGIL---DEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGFDVDE--IVVYLKETATR 322 (347)
T ss_dssp SCEEESS---TTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEEEESS--SEEEEEECSSS
T ss_pred CceEecc---ccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEeeeeeC--cEEEEEcCCCC
Confidence 5433222 234567775 8999 88 88889999999999 876655 34444577899999999 566665555
Q ss_pred -eEEeccCCccccccccCCCCCC
Q 036585 282 -LSFWIPDLSKLGAYVGRNRGCM 303 (304)
Q Consensus 282 -~~iw~~~~~~~~~~~~~~~g~~ 303 (304)
.+||.++ .+..++..++...+
T Consensus 323 ~~~l~~~~-g~~~~lt~~n~~~l 344 (347)
T 2gop_A 323 LRELFTWD-GEEKQLTDYNDPIF 344 (347)
T ss_dssp CCEEEEES-SSEEECCCTTSTTT
T ss_pred hHHheEeC-CcEEEeccccHhHH
Confidence 4899888 66777777777654
No 168
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=5.4e-21 Score=155.90 Aligned_cols=260 Identities=10% Similarity=0.026 Sum_probs=173.1
Q ss_pred eEeecccCcEEEEeeCC---CeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 20 ILQSMEVGIYLVTASDD---ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d---~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
.+.++|+|++|+..... ..|.+||+.+++.......+......+.|+|+++.|++++. ++.|++||+.+++...
T Consensus 40 ~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~---~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 40 QKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN---ELNLMKVDLETLEEQV 116 (396)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET---TTEEEEEETTTCCEEE
T ss_pred cCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc---CCcEEEEECCCCCcEE
Confidence 46789999998877543 36888999887765444433333334789999999999987 7899999999887655
Q ss_pred ecccccccEEE-------------------EEEcCCCCEEEEc-----ccCCeEEEEeCCcceeeceEEEec-cceeEec
Q 036585 97 YFKGHHDRVVL-------------------LSLCSSKDCFISG-----SLDRTVLLWDQRAEKCQGLLRVQG-RPAAAYD 151 (304)
Q Consensus 97 ~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~ 151 (304)
....+...... +.|+|+++.++.. ..+..|++||+.+++......... .....++
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~s 196 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYR 196 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceEC
Confidence 54433332222 3467777766654 356789999998877655443222 2245677
Q ss_pred C-CCe--EEEecC------CCeEEEEecCC----------CCCceEEEEecCCcEEEEeeCC-----CeEEEEEcCCCce
Q 036585 152 D-QGL--VFGYEK------GPLDIFSVGGD----------ISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTL 207 (304)
Q Consensus 152 ~-~~~--~~~~~~------~~~~~~~~~~~----------~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~ 207 (304)
+ ++. ++.... ..+.++++.+. ...+..++|+|+|+.|+..+.+ +.|++||+.+++.
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~ 276 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN 276 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe
Confidence 7 553 222222 24555554321 1136668999999988776543 4599999988876
Q ss_pred eEEEEeCCCCCCcceEEEEcC-CCcEEEEec----------------CCCcEEEEecCCCceeeeeeccCC---------
Q 036585 208 LSTYNVKPVSRNSTLEASFSP-EGMFVISGS----------------GDGSVHAWSVRSGKEVASWMSFDT--------- 261 (304)
Q Consensus 208 ~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~----------------~dg~i~v~d~~~~~~~~~~~~~~~--------- 261 (304)
...... .. .. +.|+| ||+++++++ .+..|++||+.+++. ..+..+..
T Consensus 277 ~~l~~~----~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~ 349 (396)
T 3c5m_A 277 EEVMVM----PP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDR 349 (396)
T ss_dssp EEEEEC----CS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBS
T ss_pred EEeeeC----CC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccc
Confidence 544331 11 22 89999 999888754 346899999987764 34544544
Q ss_pred --CCceEEeCCCCcEEEEecCc---eEEeccCC
Q 036585 262 --EPPVIKWAPGSLMFVTGSSE---LSFWIPDL 289 (304)
Q Consensus 262 --~i~~~~~~~~~~~l~s~~~d---~~iw~~~~ 289 (304)
.+..++|+|+|+.|+.++.+ ..||.++.
T Consensus 350 ~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~ 382 (396)
T 3c5m_A 350 QITHPHPSFTPNDDGVLFTSDFEGVPAIYIADV 382 (396)
T ss_dssp STTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred cCCCCCceEccCCCeEEEEecCCCCceEEEEEE
Confidence 25678999999988877654 66776654
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.88 E-value=3.8e-19 Score=138.61 Aligned_cols=237 Identities=9% Similarity=0.109 Sum_probs=171.3
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeec------ccccceeEEEEc-cCCCeEEEEecCCCCCceEEEEcc
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTIN------SKKYGVDLVCFT-SHPTTVIYSSKNGWDESLRLLSLH 90 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~-~~~~~l~~~~~~~~d~~i~vwd~~ 90 (304)
+..+.+.++|+++++...++.|.+||.+ ++.+..+. ++...+..+++. +++..+++.... ++.|.+|| .
T Consensus 32 p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~--~~~i~~~d-~ 107 (286)
T 1q7f_A 32 PSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP--THQIQIYN-Q 107 (286)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG--GCEEEEEC-T
T ss_pred CceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC--CCEEEEEC-C
Confidence 4557788899988888889999999977 56555553 233568899994 666655555321 68999999 5
Q ss_pred Cceeeeecc-cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEe
Q 036585 91 DNKYSRYFK-GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSV 169 (304)
Q Consensus 91 ~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
+++.+..+. .+...+..+++.|+++++++...++.|.+||.. ++....+..
T Consensus 108 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~--------------------------- 159 (286)
T 1q7f_A 108 YGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGC--------------------------- 159 (286)
T ss_dssp TSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC---------------------------
T ss_pred CCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCC---------------------------
Confidence 566655553 234578999999999988887788999999964 333222211
Q ss_pred cCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCC-cEEEEecC
Q 036585 170 GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG-SVHAWSVR 248 (304)
Q Consensus 170 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~i~v~d~~ 248 (304)
..+...+..++++|+|+++++...++.|++||. +++.+..+... .+...+..++++|+|+++++...++ .|.+||.
T Consensus 160 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~-g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~- 236 (286)
T 1q7f_A 160 SKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGE-GITNYPIGVGINSNGEILIADNHNNFNLTIFTQ- 236 (286)
T ss_dssp TTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCT-TTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-
T ss_pred CCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccC-CccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-
Confidence 122345788999999998777778999999997 45555555421 2235678999999999888887776 9999995
Q ss_pred CCceeeeeeccCC--CCceEEeCCCCcEEEEecCc-eEEeccCC
Q 036585 249 SGKEVASWMSFDT--EPPVIKWAPGSLMFVTGSSE-LSFWIPDL 289 (304)
Q Consensus 249 ~~~~~~~~~~~~~--~i~~~~~~~~~~~l~s~~~d-~~iw~~~~ 289 (304)
+++.+..+..+.. .+.+++++|+|+++++.... +++|++..
T Consensus 237 ~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 237 DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSC
T ss_pred CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEccc
Confidence 5677777755543 36789999999988775433 99998754
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.88 E-value=2.4e-20 Score=162.12 Aligned_cols=243 Identities=11% Similarity=0.077 Sum_probs=166.1
Q ss_pred EeecccCcEEEEe--eCCCeEEEEecCCcceeeeeccccccee---------EEEEc--cCCCe-EEEEecCCCCCceEE
Q 036585 21 LQSMEVGIYLVTA--SDDESIRLYDVTAATCLKTINSKKYGVD---------LVCFT--SHPTT-VIYSSKNGWDESLRL 86 (304)
Q Consensus 21 i~~~~~~~~l~~~--~~d~~i~vw~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~~~~~~~~d~~i~v 86 (304)
+.+++++-+++.. +.++...||....+.....+..+...+. ...|+ ||++. |+.+... +..|.+
T Consensus 29 ~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~--~~~l~~ 106 (662)
T 3azo_A 29 VGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG--DQRLYA 106 (662)
T ss_dssp EEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT--TCCEEE
T ss_pred eEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC--CCeEEE
Confidence 4556655556666 5578899999655555666666665555 56665 99999 7777642 556666
Q ss_pred EEcc--C-ceeeeeccc-----ccccEEEEEEcCCCCEEEEcccC----------CeEEEEeCCc------ceeeceEEE
Q 036585 87 LSLH--D-NKYSRYFKG-----HHDRVVLLSLCSSKDCFISGSLD----------RTVLLWDQRA------EKCQGLLRV 142 (304)
Q Consensus 87 wd~~--~-~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd~~~------~~~~~~~~~ 142 (304)
+++. . ++ ...+.. |...+..++|+|||+.|++++.+ ..|++||+.+ +.......
T Consensus 107 ~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~- 184 (662)
T 3azo_A 107 FEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSD- 184 (662)
T ss_dssp ECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSC-
T ss_pred EcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEe-
Confidence 6665 2 33 444554 66788999999999999988876 5899999987 44321110
Q ss_pred eccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCC--------CeEEEEEcC-CC---ceeEE
Q 036585 143 QGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTME--------GHIHVLDSF-RG---TLLST 210 (304)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~~~d~~-~~---~~~~~ 210 (304)
.+...+..++|||||++|+.++.+ ..|++||+. ++ +....
T Consensus 185 ----------------------------~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l 236 (662)
T 3azo_A 185 ----------------------------DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL 236 (662)
T ss_dssp ----------------------------SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE
T ss_pred ----------------------------cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe
Confidence 122355678999999999987754 379999998 56 33333
Q ss_pred EEeCCCCCCcceEEEEcCCCcEEEEecCCC--cEEEEecCCCceeeeeeccCCC--------CceEEeCCCCcEEEEecC
Q 036585 211 YNVKPVSRNSTLEASFSPEGMFVISGSGDG--SVHAWSVRSGKEVASWMSFDTE--------PPVIKWAPGSLMFVTGSS 280 (304)
Q Consensus 211 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~i~v~d~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~s~~~ 280 (304)
.. .+...+..++|+|||+++++++.++ .|++||+.+++.......+... +..++|+|+++++++++.
T Consensus 237 ~~---~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 237 LG---GPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp EE---ETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred CC---CCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc
Confidence 33 3467888999999999888888888 5677776666654433333222 567899999998888765
Q ss_pred c-eEEecc--CCccccccccC
Q 036585 281 E-LSFWIP--DLSKLGAYVGR 298 (304)
Q Consensus 281 d-~~iw~~--~~~~~~~~~~~ 298 (304)
. .+||.+ +..+++.+..+
T Consensus 314 ~~~~l~~~d~~~~~~~~l~~~ 334 (662)
T 3azo_A 314 GAAVLGILDPESGELVDAAGP 334 (662)
T ss_dssp SSCEEEEEETTTTEEEECCSS
T ss_pred CccEEEEEECCCCcEEEecCC
Confidence 5 788844 44555555443
No 171
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.87 E-value=3.2e-19 Score=137.77 Aligned_cols=220 Identities=9% Similarity=0.068 Sum_probs=175.2
Q ss_pred ccCcEEEEeeCCCeEEEEecCCcceeeeecccc-cceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccccc-
Q 036585 25 EVGIYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHH- 102 (304)
Q Consensus 25 ~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~- 102 (304)
..+++|++++.|+.|.+||.++++.+.++..+. ..+.++.++|+|+.++ +. ++.|..||. +++.+..+..+.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~---~~~V~~~d~-~G~~~W~~~~~~~ 76 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SY---SKGAKMITR-DGRELWNIAAPAG 76 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--EC---BSEEEEECT-TSCEEEEEECCTT
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eC---CCCEEEECC-CCCEEEEEcCCCC
Confidence 346899999999999999999999999988765 4789999999999888 33 778999999 788888887643
Q ss_pred ccEEEEEEcCCCCEEEEccc-CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEE
Q 036585 103 DRVVLLSLCSSKDCFISGSL-DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKF 181 (304)
Q Consensus 103 ~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 181 (304)
..+.++.+.|+|+++++.+. ++.+..+|. +++.+..+...... ..+......+++
T Consensus 77 ~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~-----------------------~~~~~~~~~v~~ 132 (276)
T 3no2_A 77 CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGI-----------------------ERPHAQFRQINK 132 (276)
T ss_dssp CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSC-----------------------SSGGGSCSCCEE
T ss_pred ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCC-----------------------CcccccccCceE
Confidence 47889999999999998877 778888885 56665555432110 011123455678
Q ss_pred ecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccC-
Q 036585 182 SNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFD- 260 (304)
Q Consensus 182 ~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~- 260 (304)
.++|+++++...++.|..||.. |+.+.++.. ......+.+.++|+.++++..++.|..+|..+++.+.++....
T Consensus 133 ~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~----~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~ 207 (276)
T 3no2_A 133 NKKGNYLVPLFATSEVREIAPN-GQLLNSVKL----SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDI 207 (276)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCEEEEEEC----SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGS
T ss_pred CCCCCEEEEecCCCEEEEECCC-CCEEEEEEC----CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCC
Confidence 9999999999999999999987 999998883 2455667889999999999888899999999999988886432
Q ss_pred -----CCCceEEeCCCCcEEEEec
Q 036585 261 -----TEPPVIKWAPGSLMFVTGS 279 (304)
Q Consensus 261 -----~~i~~~~~~~~~~~l~s~~ 279 (304)
..+..++..++|.++++..
T Consensus 208 ~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 208 EGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp BSCCCSEEEEEEECTTSCEEEEEE
T ss_pred CCccccccccceEcCCCCEEEEec
Confidence 1267888899999888873
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.86 E-value=4.6e-20 Score=160.35 Aligned_cols=234 Identities=13% Similarity=0.061 Sum_probs=160.9
Q ss_pred ccCcE-EEEeeC-CCeEEEEecC--Ccceeeeecc-----cccceeEEEEccCCCeEEEEecCCCC----------CceE
Q 036585 25 EVGIY-LVTASD-DESIRLYDVT--AATCLKTINS-----KKYGVDLVCFTSHPTTVIYSSKNGWD----------ESLR 85 (304)
Q Consensus 25 ~~~~~-l~~~~~-d~~i~vw~~~--~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~d----------~~i~ 85 (304)
|||++ |+.++. +..|.++++. +......+.. |...+..++|+|||+.|++++. + ..|+
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~---~~~~~~~~~~~~~i~ 164 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAE---EFTGEGPSDVRRFLA 164 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEE---EECSSSTTCEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEe---cccCCCCCCceeEEE
Confidence 89988 776654 5567777765 2033445554 5677899999999999999886 5 6899
Q ss_pred EEEccC------ceeeeecc-cccccEEEEEEcCCCCEEEEcccC--------CeEEEEeCC-cce--eeceEEEeccce
Q 036585 86 LLSLHD------NKYSRYFK-GHHDRVVLLSLCSSKDCFISGSLD--------RTVLLWDQR-AEK--CQGLLRVQGRPA 147 (304)
Q Consensus 86 vwd~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~-~~~--~~~~~~~~~~~~ 147 (304)
+||+.+ ++. ..+. .+...+..++|+|||++|+.++.+ ..|++||+. ++. ....+..
T Consensus 165 ~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~----- 238 (662)
T 3azo_A 165 AVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG----- 238 (662)
T ss_dssp EEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE-----
T ss_pred EEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC-----
Confidence 999988 554 3444 556788889999999999887754 379999998 452 1111111
Q ss_pred eEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCC--eEEEEEcCCCceeEEEEeCCCCCCc-----
Q 036585 148 AAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEG--HIHVLDSFRGTLLSTYNVKPVSRNS----- 220 (304)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~~d~~~~~~~~~~~~~~~~~~~----- 220 (304)
++...+..+.|+|||++++++..++ .|++||+.+++...... .+...
T Consensus 239 -----------------------~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~---~~~~~~~p~w 292 (662)
T 3azo_A 239 -----------------------GPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCR---REEEFAGPLW 292 (662)
T ss_dssp -----------------------ETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSC---CSSBSSCCCC
T ss_pred -----------------------CCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccc---ccccccCccc
Confidence 2335678899999999877887788 67777776666543322 11111
Q ss_pred ---ceEEEEcCCCcEEEEecCCCcEEEE--ecCCCceeeeeeccCCCCceE-EeCCCCcEEEEecCc--eEEeccC--Cc
Q 036585 221 ---TLEASFSPEGMFVISGSGDGSVHAW--SVRSGKEVASWMSFDTEPPVI-KWAPGSLMFVTGSSE--LSFWIPD--LS 290 (304)
Q Consensus 221 ---i~~~~~s~~~~~l~~~~~dg~i~v~--d~~~~~~~~~~~~~~~~i~~~-~~~~~~~~l~s~~~d--~~iw~~~--~~ 290 (304)
+..++|+|+++++++++. +.++|| |+.+++ +..+..|...+..+ +++++.-++++++.+ ..||.++ ..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g 370 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTG 370 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTC
T ss_pred cccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 457899999999999988 999999 554444 66777777777777 555554455555555 5666554 44
Q ss_pred ccccc
Q 036585 291 KLGAY 295 (304)
Q Consensus 291 ~~~~~ 295 (304)
++..+
T Consensus 371 ~~~~l 375 (662)
T 3azo_A 371 RARTI 375 (662)
T ss_dssp CEEEE
T ss_pred ceEEe
Confidence 44443
No 173
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=5.3e-19 Score=142.65 Aligned_cols=230 Identities=7% Similarity=0.058 Sum_probs=152.3
Q ss_pred EEEEeeCC--CeEEEEec--CCcceee--eec-ccccceeEEEEccCCCeEEEEecCCCCCceEEEEcc-Cceeeeeccc
Q 036585 29 YLVTASDD--ESIRLYDV--TAATCLK--TIN-SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH-DNKYSRYFKG 100 (304)
Q Consensus 29 ~l~~~~~d--~~i~vw~~--~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~-~~~~~~~~~~ 100 (304)
++++|+.. +.|.+|++ .++++.. ... .....+..++|+|++++|++++. + .|.+|++. +++......
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~---~-~v~~~~~~~~g~~~~~~~- 78 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM---K-KWSSFAVKSPTEIVHEAS- 78 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB---T-EEEEEEEEETTEEEEEEE-
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc---c-eEEEEEECCCCCEEEeeE-
Confidence 45556543 56887765 4554422 111 22346789999999999998886 6 99999997 776544322
Q ss_pred cc--ccEEEEEEcCCCCE--EEEcc-------------cCCeEEEEeCCc-ceeeceEEEeccceeEecCCCeEEEecCC
Q 036585 101 HH--DRVVLLSLCSSKDC--FISGS-------------LDRTVLLWDQRA-EKCQGLLRVQGRPAAAYDDQGLVFGYEKG 162 (304)
Q Consensus 101 ~~--~~v~~~~~~~~~~~--l~~~~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (304)
+. +.+..++|+|++++ ++++. .++.+.+|++.. ++....+....
T Consensus 79 ~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~------------------ 140 (365)
T 1jof_A 79 HPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYE------------------ 140 (365)
T ss_dssp EECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEE------------------
T ss_pred eecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEE------------------
Confidence 21 23456889999984 55554 689999999874 44332222100
Q ss_pred CeEEEEecCCCCCceEEEEecCCcEEEEeeC-CCeEEEEEcC-CCceeEEEEeC-CCCCCcceEEEEcCCCcEEEEecC-
Q 036585 163 PLDIFSVGGDISDANVVKFSNDGRLMLLTTM-EGHIHVLDSF-RGTLLSTYNVK-PVSRNSTLEASFSPEGMFVISGSG- 238 (304)
Q Consensus 163 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~d~~-~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~- 238 (304)
..+...+..++|+|+|++++++.. ++.|++||+. +++........ +.+...+..++|+|||++|++++.
T Consensus 141 -------~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~ 213 (365)
T 1jof_A 141 -------YQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA 213 (365)
T ss_dssp -------CCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT
T ss_pred -------eCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC
Confidence 013356788999999998887654 6799999998 67654322211 113456888999999999887764
Q ss_pred CCcEEEEecC--CCcee---eee---e----ccCC------CCceEE-eCCCCcEEEEecC--------ceEEeccC
Q 036585 239 DGSVHAWSVR--SGKEV---ASW---M----SFDT------EPPVIK-WAPGSLMFVTGSS--------ELSFWIPD 288 (304)
Q Consensus 239 dg~i~v~d~~--~~~~~---~~~---~----~~~~------~i~~~~-~~~~~~~l~s~~~--------d~~iw~~~ 288 (304)
++.|.+|++. +++.. ..+ . +|.. .+..++ |+|||++|+++.. .+.+|+++
T Consensus 214 ~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 214 GNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp TTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEEC
T ss_pred CCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEEC
Confidence 6889999875 45542 122 1 1222 478899 9999998876542 37889885
No 174
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.86 E-value=9.3e-19 Score=153.18 Aligned_cols=239 Identities=10% Similarity=-0.003 Sum_probs=165.6
Q ss_pred eeeEeecccCcEEEEeeCCC-----eEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCc---------
Q 036585 18 EEILQSMEVGIYLVTASDDE-----SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES--------- 83 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~-----~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~--------- 83 (304)
...+.++|||++||.++.++ .|++||+.+++.+.....+ ..+..++|+||++.|++++. ++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~---~~~~~~~~~~~~ 202 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAY---PQQDGKSDGTET 202 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEEC---CCCSSCCSSSCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEE---CCcccccccccc
Confidence 34578999999999776543 8999999998876643322 23678999999999999987 444
Q ss_pred -------eEEEEccCcee----eeecccccccEEEEEEcCCCCEEEEccc-----CCeEEEEeCCc------ce-eeceE
Q 036585 84 -------LRLLSLHDNKY----SRYFKGHHDRVVLLSLCSSKDCFISGSL-----DRTVLLWDQRA------EK-CQGLL 140 (304)
Q Consensus 84 -------i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~------~~-~~~~~ 140 (304)
|++|++.+++. +.....|...+..+.|+|+|++|+..+. +..|++||+.+ +. ....+
T Consensus 203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe
Confidence 99999988752 2222334556889999999998887664 56899999876 32 12222
Q ss_pred EEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCC----CeEEEEEcCCCce--eEEEEeC
Q 036585 141 RVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTME----GHIHVLDSFRGTL--LSTYNVK 214 (304)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~~~d~~~~~~--~~~~~~~ 214 (304)
. .+...+.. .|+|+|+.|+..+.. +.|.+||+.++.. ...+..+
T Consensus 283 ~-----------------------------~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 332 (710)
T 2xdw_A 283 I-----------------------------DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE 332 (710)
T ss_dssp E-----------------------------CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC
T ss_pred e-----------------------------CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC
Confidence 1 12223333 588999887776553 4699999987642 2334311
Q ss_pred CCCCCcceEEEEcCCCcEEEEecCCCc--EEEEecCCCceeeeeeccCCCCceEEeCCCCcEEE-EecCc-----eEEec
Q 036585 215 PVSRNSTLEASFSPEGMFVISGSGDGS--VHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFV-TGSSE-----LSFWI 286 (304)
Q Consensus 215 ~~~~~~i~~~~~s~~~~~l~~~~~dg~--i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-s~~~d-----~~iw~ 286 (304)
.....+..++|++++.++++...++. |++||+.+++.+..+..+.+.+..+.++|++..++ +.+.. +.+|+
T Consensus 333 -~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 333 -HEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp -CSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEE
T ss_pred -CCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEE
Confidence 11236778999988888888888874 67778777887777877777888999999986554 32322 55555
Q ss_pred cCCcc
Q 036585 287 PDLSK 291 (304)
Q Consensus 287 ~~~~~ 291 (304)
+...+
T Consensus 412 ~~tg~ 416 (710)
T 2xdw_A 412 LTKEE 416 (710)
T ss_dssp TTSSS
T ss_pred CCCCc
Confidence 54444
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=2.6e-20 Score=151.51 Aligned_cols=254 Identities=9% Similarity=0.029 Sum_probs=168.3
Q ss_pred EEEecCCcceeeeecccccceeE-----EEEccCCCeEEEEecCCCCC--ceEEEEccCceeeeecccccccEEEEEEcC
Q 036585 40 RLYDVTAATCLKTINSKKYGVDL-----VCFTSHPTTVIYSSKNGWDE--SLRLLSLHDNKYSRYFKGHHDRVVLLSLCS 112 (304)
Q Consensus 40 ~vw~~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~~~~~~~~d~--~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 112 (304)
..++..++..+..+..|...... .+|+|||+.|++++.. ++ .|.+||+.+++.......+...+..+.|+|
T Consensus 13 ~~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~--~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp 90 (388)
T 3pe7_A 13 TYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAF--DGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP 90 (388)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECT--TSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT
T ss_pred EEecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcC--CCCceEEEEeCCCCceEEeeeCCCCCccceEEcC
Confidence 34577778888888877655555 8899999999998863 34 588889999888777766666666778999
Q ss_pred CCCEEEEcccCCeEEEEeCCcceeeceEEEeccce----eEecCCCeEEEe------------------------cCCCe
Q 036585 113 SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPA----AAYDDQGLVFGY------------------------EKGPL 164 (304)
Q Consensus 113 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------------------------~~~~~ 164 (304)
+++.|+.++.++.|++||+.+++.......+.... ...++++..+.. ....+
T Consensus 91 dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 170 (388)
T 3pe7_A 91 DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRL 170 (388)
T ss_dssp TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceE
Confidence 99999999999999999999887765554433211 223555544321 11233
Q ss_pred EEEEec--------CCCCCceEEEEec-CCcEEEEeeCC------CeEEEEEcCCCceeEEEEeCCCCC-CcceEEEEcC
Q 036585 165 DIFSVG--------GDISDANVVKFSN-DGRLMLLTTME------GHIHVLDSFRGTLLSTYNVKPVSR-NSTLEASFSP 228 (304)
Q Consensus 165 ~~~~~~--------~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~-~~i~~~~~s~ 228 (304)
.++++. .+...+..++|+| +|+.|+....+ ..|.++|...++...... ... ..+..++|+|
T Consensus 171 ~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~~~~~~~~~~~~sp 247 (388)
T 3pe7_A 171 MRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT---HAEGESCTHEFWVP 247 (388)
T ss_dssp EEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC---CCTTEEEEEEEECT
T ss_pred EEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee---CCCCcccccceECC
Confidence 334332 2345578899999 99988877653 378888876654332222 121 3577889999
Q ss_pred CCcEEEEecC-CC----cEEEEecCCCceee--eeeccC---CCCceEEeCCCCcEEEEe---------cCc--eEEecc
Q 036585 229 EGMFVISGSG-DG----SVHAWSVRSGKEVA--SWMSFD---TEPPVIKWAPGSLMFVTG---------SSE--LSFWIP 287 (304)
Q Consensus 229 ~~~~l~~~~~-dg----~i~v~d~~~~~~~~--~~~~~~---~~i~~~~~~~~~~~l~s~---------~~d--~~iw~~ 287 (304)
||+.|+..+. ++ .|++||+.+++... .+.++. .....+.|+|||+.|+.. ..+ +.+|+.
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 248 DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence 9997765432 22 39999999887432 222210 113445899999988753 222 888888
Q ss_pred CCccccccccC
Q 036585 288 DLSKLGAYVGR 298 (304)
Q Consensus 288 ~~~~~~~~~~~ 298 (304)
+..++..+..+
T Consensus 328 ~~~~~~~l~~~ 338 (388)
T 3pe7_A 328 KNGTQHRVARH 338 (388)
T ss_dssp TTTEEEEEEEC
T ss_pred cCCceEEeccc
Confidence 87766555443
No 176
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.84 E-value=5.9e-18 Score=130.69 Aligned_cols=239 Identities=9% Similarity=0.005 Sum_probs=162.9
Q ss_pred ceeeEeecccCcEEE-EeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceee
Q 036585 17 SEEILQSMEVGIYLV-TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYS 95 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~-~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~ 95 (304)
.+..+.+.++|++++ +...++.|.+|+..+.........+...+..+++.++++ ++++.. ++.|.+||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~---~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT-VYVTDF---NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC-EEEEET---TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC-EEEEcC---CCEEEEEeCCCceEe
Confidence 455677888998777 557788999999766543322223334678899999988 444544 789999998765433
Q ss_pred eecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCC
Q 036585 96 RYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISD 175 (304)
Q Consensus 96 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
.........+..+++.++++++++...++.|.+|+..+....... ......
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-----------------------------~~~~~~ 151 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP-----------------------------FTGLND 151 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC-----------------------------CCSCCS
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec-----------------------------cccCCC
Confidence 222223356889999999998887777889999975543221110 012235
Q ss_pred ceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeee
Q 036585 176 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVAS 255 (304)
Q Consensus 176 v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 255 (304)
+..++++++|+++++...++.|.+||........... .....+..++++++|.++++...++.|.+||.........
T Consensus 152 p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~---~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~ 228 (270)
T 1rwi_B 152 PDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF---TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVL 228 (270)
T ss_dssp CCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC---SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEEC
T ss_pred ceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc---cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceee
Confidence 6789999999977777778899999987665433211 2335678999999998777777788999999866543332
Q ss_pred eeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc
Q 036585 256 WMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 256 ~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
...+...+.+++++|+|+++++...+ +++++.+.++
T Consensus 229 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp CCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred ccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 22333568999999999877777666 7777665544
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.84 E-value=1.2e-17 Score=132.95 Aligned_cols=236 Identities=11% Similarity=0.108 Sum_probs=163.7
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCC----CceEEEEccCcee
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWD----ESLRLLSLHDNKY 94 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d----~~i~vwd~~~~~~ 94 (304)
..+.+.++|++++++..++.|.+||.++++.......+...+.+++++|+++.+++... + +.|.+||..+++.
T Consensus 48 ~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~---~~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLG---DFKSTGGIFAATENGDNL 124 (333)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECT---TSSSCCEEEEECTTSCSC
T ss_pred cCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCC---CCCCCceEEEEeCCCCEE
Confidence 45677889998888888999999999887765544445668999999999987777654 5 6899999987765
Q ss_pred eeecc--cccccEEEEEEcCCCCEEEEccc------CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEE
Q 036585 95 SRYFK--GHHDRVVLLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDI 166 (304)
Q Consensus 95 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (304)
...+. .+...+..+.++|+++++++... .+.|..+|..+++......
T Consensus 125 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------------------- 179 (333)
T 2dg1_A 125 QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ------------------------- 179 (333)
T ss_dssp EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE-------------------------
T ss_pred EEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec-------------------------
Confidence 43332 23457899999999987776653 3566666665443322111
Q ss_pred EEecCCCCCceEEEEecCCcEEEEe-eCCCeEEEEEcCC-CceeEEE-----EeCCCCCCcceEEEEcCCCcEEEEecCC
Q 036585 167 FSVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFR-GTLLSTY-----NVKPVSRNSTLEASFSPEGMFVISGSGD 239 (304)
Q Consensus 167 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~-~~~~~~~-----~~~~~~~~~i~~~~~s~~~~~l~~~~~d 239 (304)
....+..++|+|+++.++++ +.++.|.+||+.+ +.....+ ..... ...+..++++++|+++++...+
T Consensus 180 -----~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~l~v~~~~~ 253 (333)
T 2dg1_A 180 -----NISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG-HEGPDSCCIDSDDNLYVAMYGQ 253 (333)
T ss_dssp -----EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS-SSEEEEEEEBTTCCEEEEEETT
T ss_pred -----CCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCC-CCCCCceEECCCCCEEEEEcCC
Confidence 11245779999999866554 5678999999864 3332221 11111 2467789999999988877778
Q ss_pred CcEEEEecCCCceeeeeeccCC------CCceEEeCCCCcEEEEecCc------eEEeccCC
Q 036585 240 GSVHAWSVRSGKEVASWMSFDT------EPPVIKWAPGSLMFVTGSSE------LSFWIPDL 289 (304)
Q Consensus 240 g~i~v~d~~~~~~~~~~~~~~~------~i~~~~~~~~~~~l~s~~~d------~~iw~~~~ 289 (304)
+.|.+||. +++.+..+..+.. .+.+++|+|++..|+.++.+ ..||.++.
T Consensus 254 ~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~ 314 (333)
T 2dg1_A 254 GRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNG 314 (333)
T ss_dssp TEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEEC
T ss_pred CEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEec
Confidence 89999998 5666666654432 68999999998666544332 56776544
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.84 E-value=8e-18 Score=133.60 Aligned_cols=229 Identities=11% Similarity=0.093 Sum_probs=163.7
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEe-cCCCCCceEEEEccCceeeeeccccc--
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS-KNGWDESLRLLSLHDNKYSRYFKGHH-- 102 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~~~~d~~i~vwd~~~~~~~~~~~~~~-- 102 (304)
.++++++...++.|.+||..+++.+.++.. ......+++++++ .++++. . ++.|.+||..+++....+....
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g-~lyv~~~~---~~~v~~iD~~t~~~~~~i~~g~~~ 127 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDE-KAYVTQIW---DYRIFIINPKTYEITGYIECPDMD 127 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETT-EEEEEEBS---CSEEEEEETTTTEEEEEEECTTCC
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCC-eEEEEECC---CCeEEEEECCCCeEEEEEEcCCcc
Confidence 355566666678999999999999888853 3568899999998 555555 5 8999999999988776655322
Q ss_pred ---ccEEEEEEcCCCCEEEEcc-cCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceE
Q 036585 103 ---DRVVLLSLCSSKDCFISGS-LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANV 178 (304)
Q Consensus 103 ---~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 178 (304)
.....+++ .++..+++.. .++.|.++|+++++....+... .....
T Consensus 128 ~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g------------------------------~~p~~ 176 (328)
T 3dsm_A 128 MESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG------------------------------IQPTS 176 (328)
T ss_dssp TTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS------------------------------SCBCC
T ss_pred ccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC------------------------------CCccc
Confidence 14456666 3444444433 4889999999998776655421 23456
Q ss_pred EEEecCCcEEEEeeCC----------CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecC
Q 036585 179 VKFSNDGRLMLLTTME----------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVR 248 (304)
Q Consensus 179 ~~~~~~~~~l~~~~~d----------g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~ 248 (304)
++++|+|++++++..+ +.|.++|..+++....+... .......++|+|++++|+++.. .|.+||+.
T Consensus 177 i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~--~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~ 252 (328)
T 3dsm_A 177 LVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK--LGDWPSEVQLNGTRDTLYWINN--DIWRMPVE 252 (328)
T ss_dssp CEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC--TTCCCEEEEECTTSCEEEEESS--SEEEEETT
T ss_pred eEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecC--CCCCceeEEEecCCCEEEEEcc--EEEEEECC
Confidence 8899999977776554 79999999999888777632 1346789999999999988765 89999998
Q ss_pred CCceeee--eeccCCCCceEEeCCC-CcEEEEe----cCc--eEEeccCCccccc
Q 036585 249 SGKEVAS--WMSFDTEPPVIKWAPG-SLMFVTG----SSE--LSFWIPDLSKLGA 294 (304)
Q Consensus 249 ~~~~~~~--~~~~~~~i~~~~~~~~-~~~l~s~----~~d--~~iw~~~~~~~~~ 294 (304)
+++.... +.........++++|+ +.++++. ..+ +.+|+.+.+.+..
T Consensus 253 t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~ 307 (328)
T 3dsm_A 253 ADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDE 307 (328)
T ss_dssp CSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEE
T ss_pred CCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEE
Confidence 8775321 2222456889999994 5555554 233 8888887554443
No 179
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.83 E-value=9.2e-19 Score=153.86 Aligned_cols=259 Identities=11% Similarity=0.075 Sum_probs=159.0
Q ss_pred EeecccCcEEEEeeCC---------CeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC
Q 036585 21 LQSMEVGIYLVTASDD---------ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD 91 (304)
Q Consensus 21 i~~~~~~~~l~~~~~d---------~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~ 91 (304)
+.++|||++|+.++.+ +.+.+||+.+++.. .+..|...+...+|||||+.|+.+. ++.|++|++.+
T Consensus 67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~----~~~i~~~~~~~ 141 (740)
T 4a5s_A 67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVW----NNDIYVKIEPN 141 (740)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEE----TTEEEEESSTT
T ss_pred eEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEE----CCeEEEEECCC
Confidence 6789999999999876 55679999988754 4666777899999999999999996 88999999988
Q ss_pred ceeeee-cccccccE-----------------EEEEEcCCCCEEEEcccCC-eEEEEeCCcceeeceEEEeccceeEec-
Q 036585 92 NKYSRY-FKGHHDRV-----------------VLLSLCSSKDCFISGSLDR-TVLLWDQRAEKCQGLLRVQGRPAAAYD- 151 (304)
Q Consensus 92 ~~~~~~-~~~~~~~v-----------------~~~~~~~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~- 151 (304)
++..+. ..++...+ ..+.|+|||+.|+.++.|. .+.+|++........ .......+.+.
T Consensus 142 ~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~-~~~~~~~~~yp~ 220 (740)
T 4a5s_A 142 LPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESL-QYPKTVRVPYPK 220 (740)
T ss_dssp SCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTC-SSCEEEEEECCB
T ss_pred CceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCC-CCCcceeecCCC
Confidence 775442 22333223 3489999999999887554 377776532211100 00000001111
Q ss_pred -----CCCeEEEe--cC---C-CeEEEEec------CCCCCceEEEEecCCcEEEEeeC----CCeEEEEEcCCCc----
Q 036585 152 -----DQGLVFGY--EK---G-PLDIFSVG------GDISDANVVKFSNDGRLMLLTTM----EGHIHVLDSFRGT---- 206 (304)
Q Consensus 152 -----~~~~~~~~--~~---~-~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~---- 206 (304)
+...+... .. + .+....+. ++...+..++|+|||+.++.... +..|++||+.+++
T Consensus 221 ~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~ 300 (740)
T 4a5s_A 221 AGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWN 300 (740)
T ss_dssp TTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEE
T ss_pred CcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccc
Confidence 11111111 11 1 00122222 25566888999999997665433 3479999999887
Q ss_pred ee--EEE-EeCCCCCCcce-----EEEEcCCCcEEE-Eec-CCC--cEEEEecCCCceeeeeeccCCCCceEE-eCCCCc
Q 036585 207 LL--STY-NVKPVSRNSTL-----EASFSPEGMFVI-SGS-GDG--SVHAWSVRSGKEVASWMSFDTEPPVIK-WAPGSL 273 (304)
Q Consensus 207 ~~--~~~-~~~~~~~~~i~-----~~~~s~~~~~l~-~~~-~dg--~i~v~d~~~~~~~~~~~~~~~~i~~~~-~~~~~~ 273 (304)
+. ..+ .. .+...+. ...|+|||+.|+ ..+ .+| .|++||+.+++.. .+......+..+. ++ ++.
T Consensus 301 ~~~~~~l~~~--~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~~d-~~~ 376 (740)
T 4a5s_A 301 CLVARQHIEM--STTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEALT-SDY 376 (740)
T ss_dssp ECGGGCEEEE--CSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEEEC-SSE
T ss_pred eeEEEEeeec--cCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEEEe-CCE
Confidence 21 222 11 2444433 688999999876 554 333 5888998766554 4443445555554 33 344
Q ss_pred EEEEecC--c----eEEeccCC
Q 036585 274 MFVTGSS--E----LSFWIPDL 289 (304)
Q Consensus 274 ~l~s~~~--d----~~iw~~~~ 289 (304)
+++++.. + ..||.++.
T Consensus 377 i~f~~~~~~~~~~~~~ly~v~~ 398 (740)
T 4a5s_A 377 LYYISNEYKGMPGGRNLYKIQL 398 (740)
T ss_dssp EEEEESCGGGCTTCBEEEEEET
T ss_pred EEEEEecCCCCCceeEEEEEEC
Confidence 4455554 2 67776654
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.82 E-value=1.9e-18 Score=150.86 Aligned_cols=242 Identities=12% Similarity=0.004 Sum_probs=159.2
Q ss_pred eeeEeecccCcEEE-----EeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCc---------
Q 036585 18 EEILQSMEVGIYLV-----TASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDES--------- 83 (304)
Q Consensus 18 ~~~i~~~~~~~~l~-----~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~--------- 83 (304)
...+.++|||++|| .|+.+..|++||+.+++.+..-.........++|+||++.|++++. |..
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~---d~~~~~~~~~~~ 199 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWL---PTDPSIKVDERP 199 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEEC---CCCTTSCGGGGG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEe---cCCCCCccccCC
Confidence 34578999999999 4445578999999998865111111111267999999999999987 554
Q ss_pred ----eEEEEccCce----eeeecccccccEEEEEEcCCCCEEEEcccCC----eEEEEeCCcceeeceEEEeccceeEec
Q 036585 84 ----LRLLSLHDNK----YSRYFKGHHDRVVLLSLCSSKDCFISGSLDR----TVLLWDQRAEKCQGLLRVQGRPAAAYD 151 (304)
Q Consensus 84 ----i~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~ 151 (304)
|++|++.+++ .+.....+...+..+.|+|+|++|+..+.++ .|++|+..++.......
T Consensus 200 ~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~---------- 269 (695)
T 2bkl_A 200 GYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK---------- 269 (695)
T ss_dssp GGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE----------
T ss_pred CCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec----------
Confidence 9999998875 3333344556789999999999888877665 67777654443222111
Q ss_pred CCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeC----CCeEEEEEcCCCce--eEEEEeCCCCCCcceEEE
Q 036585 152 DQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTM----EGHIHVLDSFRGTL--LSTYNVKPVSRNSTLEAS 225 (304)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~~--~~~~~~~~~~~~~i~~~~ 225 (304)
+...+....+ ++|. ++..+. ++.|.+||+.+++. ...+... .....+..++
T Consensus 270 --------------------~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~-~~~~~l~~~~ 326 (695)
T 2bkl_A 270 --------------------GVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPE-DSSASLLSVS 326 (695)
T ss_dssp --------------------CSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECC-CSSCEEEEEE
T ss_pred --------------------CCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecC-CCCCeEEEEE
Confidence 2223444555 6677 554443 57899999987653 2333311 1245677888
Q ss_pred EcCCCcEEEEecCCCcEEEEecC-CCceeeeeecc-CCCCceEEeCCCCcEEEEec-C---c--eEEeccCCccccccc
Q 036585 226 FSPEGMFVISGSGDGSVHAWSVR-SGKEVASWMSF-DTEPPVIKWAPGSLMFVTGS-S---E--LSFWIPDLSKLGAYV 296 (304)
Q Consensus 226 ~s~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~~-~~~i~~~~~~~~~~~l~s~~-~---d--~~iw~~~~~~~~~~~ 296 (304)
|+ ++.++++...|+..++|.+. +++....+..+ .+.+..+.++|++..++... + . +.+|+.+..+...+.
T Consensus 327 ~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 327 IV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp EE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred EE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 88 77788888889988877654 45555666544 56678889999987665322 2 2 666776655544443
No 181
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.82 E-value=1.3e-16 Score=134.65 Aligned_cols=259 Identities=14% Similarity=0.128 Sum_probs=180.1
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEcc--Cceeeeecccccc
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DNKYSRYFKGHHD 103 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~--~~~~~~~~~~~~~ 103 (304)
.+.++++...++.|.++|..+++.+.++.... .+..+.|+|+++++++++. |+.|.+||+. +++.+..+... .
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~---dg~V~viD~~~~t~~~v~~i~~G-~ 240 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGR---DGKVNMIDLWMKEPTTVAEIKIG-S 240 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEET---TSEEEEEETTSSSCCEEEEEECC-S
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcC---CCeEEEEECCCCCCcEeEEEecC-C
Confidence 35567777788999999999999998887543 5679999999999999987 9999999995 77777776643 3
Q ss_pred cEEEEEEc----CCCCEEEEccc-CCeEEEEeCCcceeeceEEEecc-------------ceeEecCCC--eEE-EecCC
Q 036585 104 RVVLLSLC----SSKDCFISGSL-DRTVLLWDQRAEKCQGLLRVQGR-------------PAAAYDDQG--LVF-GYEKG 162 (304)
Q Consensus 104 ~v~~~~~~----~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~-------------~~~~~~~~~--~~~-~~~~~ 162 (304)
....++|+ |+|++++++.. ++.+.++|..+.+.+..+..... ..+..++++ .++ ..+.+
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 46789999 69998887664 58999999999888776654221 112223322 111 12223
Q ss_pred CeEEEEecC----------CCCCceEEEEecCCcEEEEee-CCCeEEEEEcCCCceeEEEEe-C-CCCCCcceEEEEcCC
Q 036585 163 PLDIFSVGG----------DISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNV-K-PVSRNSTLEASFSPE 229 (304)
Q Consensus 163 ~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~-~-~~~~~~i~~~~~s~~ 229 (304)
.+.+.+... .......+.|+|+|++++++. .++.|.++|+.+++....+.. . ..|.+.-..+ ++|+
T Consensus 321 ~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~ 399 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPT 399 (567)
T ss_dssp EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETT
T ss_pred eEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCC
Confidence 343333221 123455789999999987765 578999999999998887764 2 1222212122 5887
Q ss_pred CcEE-EEec-CCCcEEEEecCC-------CceeeeeeccCCCCceEEeCCCCcEEEEec--------Cc-eEEeccCCc
Q 036585 230 GMFV-ISGS-GDGSVHAWSVRS-------GKEVASWMSFDTEPPVIKWAPGSLMFVTGS--------SE-LSFWIPDLS 290 (304)
Q Consensus 230 ~~~l-~~~~-~dg~i~v~d~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~--------~d-~~iw~~~~~ 290 (304)
+..+ +++. .++.|.++|..+ .+.++++......-..+..+|+++++.+.. .+ +.+++.+..
T Consensus 400 ~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 400 FGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred CCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 5544 4443 468999999987 567777765544445688999999888755 23 888887543
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.82 E-value=1.6e-18 Score=141.33 Aligned_cols=254 Identities=9% Similarity=0.016 Sum_probs=159.8
Q ss_pred EEEecCCcceeeeecccccc-----eeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCC
Q 036585 40 RLYDVTAATCLKTINSKKYG-----VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSK 114 (304)
Q Consensus 40 ~vw~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 114 (304)
...|..+++.+..+..+... +..++|+|+|+.|++....+.+..|.+||+.+++.......+......+.|+|++
T Consensus 13 ~~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg 92 (396)
T 3c5m_A 13 TFVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDE 92 (396)
T ss_dssp EEECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTS
T ss_pred eeecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCC
Confidence 34577788777777655433 6788999999999888753224578889998887655444333223347899999
Q ss_pred CEEEEcccCCeEEEEeCCcceeeceEEEeccce---------------------eEecCCCeEEE-------ecCCCeEE
Q 036585 115 DCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPA---------------------AAYDDQGLVFG-------YEKGPLDI 166 (304)
Q Consensus 115 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~-------~~~~~~~~ 166 (304)
+.|+.++.++.|++||+.+++.......+.... ..+++++..+. .....+.+
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~ 172 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIK 172 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEE
Confidence 999999999999999998876554443221110 12233322111 11112333
Q ss_pred EEec--------CCCCCceEEEEec-CCcEEEEeeCC------CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCc
Q 036585 167 FSVG--------GDISDANVVKFSN-DGRLMLLTTME------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 231 (304)
Q Consensus 167 ~~~~--------~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 231 (304)
+++. .+...+..+.|+| +++.|+..+.+ ..|.+||+..++...... ......+..++|+|||+
T Consensus 173 ~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~--~~~~~~~~~~~~spdg~ 250 (396)
T 3c5m_A 173 VDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE--HAEGESCTHEFWIPDGS 250 (396)
T ss_dssp EETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC--CCTTEEEEEEEECTTSS
T ss_pred EECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec--cCCCccccceEECCCCC
Confidence 3322 2345677899999 78877766543 468899987654322211 01133577889999999
Q ss_pred EEEEecCC-----CcEEEEecCCCceeeeeeccCCCCceEEeCC-CCcEEEEec------------------CceEEecc
Q 036585 232 FVISGSGD-----GSVHAWSVRSGKEVASWMSFDTEPPVIKWAP-GSLMFVTGS------------------SELSFWIP 287 (304)
Q Consensus 232 ~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~s~~------------------~d~~iw~~ 287 (304)
+|+.++.+ +.|++||+.+++...... ... .. +.|+| ||+++++++ ..+.+|+.
T Consensus 251 ~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 251 AMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp CEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEET
T ss_pred EEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 87776433 349999998876533221 111 22 89999 999888754 12777887
Q ss_pred CCccccccccC
Q 036585 288 DLSKLGAYVGR 298 (304)
Q Consensus 288 ~~~~~~~~~~~ 298 (304)
+..++..+..+
T Consensus 328 ~~~~~~~l~~~ 338 (396)
T 3c5m_A 328 KAKSAQKLCKH 338 (396)
T ss_dssp TTTBCCEEEEC
T ss_pred ccCceEEccCC
Confidence 76665555433
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.81 E-value=6.8e-18 Score=134.46 Aligned_cols=238 Identities=9% Similarity=0.090 Sum_probs=166.8
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecc
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFK 99 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~ 99 (304)
.+.+.+++..++..+.++.++.| .++....+..+...+.+++|+++++.++++.. ++.|.+||..+++......
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~---~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 10 TLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVF---EGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp BCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETT---TCEEEEECTTTCCEEEEEE
T ss_pred eeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECC---CCEEEEEeCCCCcEEEEee
Confidence 45667777777777778889999 35566667666667899999999997777776 8899999998887655443
Q ss_pred cccccEEEEEEcCCCCEEEEcccC----CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCC
Q 036585 100 GHHDRVVLLSLCSSKDCFISGSLD----RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISD 175 (304)
Q Consensus 100 ~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
.+...+.+++++|+++++++...+ +.|.+||.+++.....+... .....
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---------------------------~~~~~ 136 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDL---------------------------STAYC 136 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSS---------------------------SSCCC
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccC---------------------------ccCCc
Confidence 466789999999999988877666 68999998776543221100 12246
Q ss_pred ceEEEEecCCcEEEEeeC------CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEE-ecCCCcEEEEecC
Q 036585 176 ANVVKFSNDGRLMLLTTM------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVIS-GSGDGSVHAWSVR 248 (304)
Q Consensus 176 v~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~i~v~d~~ 248 (304)
+..++++|+|+++++... .+.|..+|..+++...... ....+..++|+|++++|+. .+.++.|++||+.
T Consensus 137 ~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 137 IDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ----NISVANGIALSTDEKVLWVTETTANRLHRIALE 212 (333)
T ss_dssp EEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE----EESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec----CCCcccceEECCCCCEEEEEeCCCCeEEEEEec
Confidence 788999999987776543 3567777766555443322 2345678999999986654 4567899999996
Q ss_pred C-Cceeeee--------eccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcccccc
Q 036585 249 S-GKEVASW--------MSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSKLGAY 295 (304)
Q Consensus 249 ~-~~~~~~~--------~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~~~~~ 295 (304)
+ ++.+..+ .++ ..+..++++++|+++++...+ +.+|+.+.+.+..+
T Consensus 213 ~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~~~~ 269 (333)
T 2dg1_A 213 DDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQI 269 (333)
T ss_dssp TTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEE
T ss_pred CCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCCCCEEEEE
Confidence 4 3332211 112 357889999999987776543 88888876555444
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.80 E-value=7.6e-17 Score=126.24 Aligned_cols=214 Identities=13% Similarity=0.119 Sum_probs=152.2
Q ss_pred eeeeecccccceeEEEEccCCC-eEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEE
Q 036585 49 CLKTINSKKYGVDLVCFTSHPT-TVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVL 127 (304)
Q Consensus 49 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 127 (304)
.+..+..+.....+++|+|+++ .++++.. ++.|..|+..++ ...+..+...+.+++++|+++++++...++.|.
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~---~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVR---QNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGG---GTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCC---CCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEE
Confidence 3444555555678999999998 5666666 899999999887 555666777899999999999888877778999
Q ss_pred EEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEE----ee-----------
Q 036585 128 LWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLL----TT----------- 192 (304)
Q Consensus 128 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~----------- 192 (304)
+||..+++.......... .....+..++++|+|+++++ ++
T Consensus 94 ~~d~~~g~~~~~~~~~~~-------------------------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~ 148 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEG-------------------------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEM 148 (296)
T ss_dssp EECSTTCCEEEEECEETT-------------------------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCC
T ss_pred EEcCCCCcEEEEeeccCC-------------------------CCCCCCCCEEECCCCCEEEECCccccccccccccccc
Confidence 999977764332211100 01135677999999998776 33
Q ss_pred --CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecC-CCce---eeeeeccCCCCceE
Q 036585 193 --MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVR-SGKE---VASWMSFDTEPPVI 266 (304)
Q Consensus 193 --~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~-~~~~---~~~~~~~~~~i~~~ 266 (304)
..+.|..++.. ++. ..+. ........++|+|+++.+++.+.++.|++|++. +++. ...+..+...+.++
T Consensus 149 ~~~~~~l~~~~~~-g~~-~~~~---~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i 223 (296)
T 3e5z_A 149 ELPGRWVFRLAPD-GTL-SAPI---RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGL 223 (296)
T ss_dssp CSSSCEEEEECTT-SCE-EEEE---CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSE
T ss_pred cCCCcEEEEECCC-CCE-EEee---cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeE
Confidence 13567777655 443 3333 345567889999999988777888999999996 4544 22333355667899
Q ss_pred EeCCCCcEEEEecCceEEeccCCcccccccc
Q 036585 267 KWAPGSLMFVTGSSELSFWIPDLSKLGAYVG 297 (304)
Q Consensus 267 ~~~~~~~~l~s~~~d~~iw~~~~~~~~~~~~ 297 (304)
+++++|+++++....+.+|+.+.+.+..+..
T Consensus 224 ~~d~~G~l~v~~~~~v~~~~~~g~~~~~~~~ 254 (296)
T 3e5z_A 224 RVDAGGLIWASAGDGVHVLTPDGDELGRVLT 254 (296)
T ss_dssp EEBTTSCEEEEETTEEEEECTTSCEEEEEEC
T ss_pred EECCCCCEEEEcCCeEEEECCCCCEEEEEEC
Confidence 9999999877773339999988766655543
No 185
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.79 E-value=1.2e-15 Score=122.75 Aligned_cols=266 Identities=8% Similarity=-0.055 Sum_probs=172.3
Q ss_pred ecccCcEEEEeeC--CC---eEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecC-------CCCCceEEEEcc
Q 036585 23 SMEVGIYLVTASD--DE---SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSLH 90 (304)
Q Consensus 23 ~~~~~~~l~~~~~--d~---~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-------~~d~~i~vwd~~ 90 (304)
..++++++++... .. .|.++|..+++.+.++.....+ .++++||++.++++... ..++.|.+||..
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 3467777776653 22 7899999999988887755443 99999999999998620 016789999999
Q ss_pred Cceeeeecccc-------cccEEEEEEcCCCCEEEEccc--CCeEEEEeCCcceeece-EEEeccceeEe-cCCCeEEEe
Q 036585 91 DNKYSRYFKGH-------HDRVVLLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGL-LRVQGRPAAAY-DDQGLVFGY 159 (304)
Q Consensus 91 ~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~ 159 (304)
+.+.+..+.-. ......+.|+|+|++|+++.. ++.|.++| .+++.... +.......+.. .+...+...
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 184 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLC 184 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEc
Confidence 88776655321 123457899999999998764 57899999 98887766 54432211111 111122222
Q ss_pred cCCCeEEEEecC-------------CCCC-ceEEEEecCCcEEEEeeCCCeEEEEEcCCCc--eeEEEEeCCC-------
Q 036585 160 EKGPLDIFSVGG-------------DISD-ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT--LLSTYNVKPV------- 216 (304)
Q Consensus 160 ~~~~~~~~~~~~-------------~~~~-v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~--~~~~~~~~~~------- 216 (304)
.++.+..++..+ ...+ .....+.+++..++..+..+.+.+.|+.+.. ....+.....
T Consensus 185 ~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~ 264 (373)
T 2mad_H 185 AQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTW 264 (373)
T ss_pred CCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccce
Confidence 333333333300 0011 1223556666555555578899999987653 2233321100
Q ss_pred CCCcceEEEEcCCCcEEEEecC----------CCcEEEEecCCCceeeeeeccCCCCceEEeCCCCc-EEEEecC-c--e
Q 036585 217 SRNSTLEASFSPEGMFVISGSG----------DGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSL-MFVTGSS-E--L 282 (304)
Q Consensus 217 ~~~~i~~~~~s~~~~~l~~~~~----------dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~~-d--~ 282 (304)
.......++++|+++.++++.. .+.|.++|+.+++.+.++. -.....+++|+|||+ .++++.. + +
T Consensus 265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 1122344789999998887643 3579999999999988885 334689999999999 7777663 3 8
Q ss_pred EEeccCCccc
Q 036585 283 SFWIPDLSKL 292 (304)
Q Consensus 283 ~iw~~~~~~~ 292 (304)
.++|....++
T Consensus 344 ~ViD~~t~~v 353 (373)
T 2mad_H 344 HIYDAGAGDQ 353 (373)
T ss_pred EEEECCCCCE
Confidence 8888866554
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.79 E-value=2.6e-16 Score=124.91 Aligned_cols=223 Identities=5% Similarity=0.023 Sum_probs=159.1
Q ss_pred CCCeEEEEecCCcceeeeecc------cccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEE
Q 036585 35 DDESIRLYDVTAATCLKTINS------KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLL 108 (304)
Q Consensus 35 ~d~~i~vw~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~ 108 (304)
.+++|.++|.++++....+.. .......+++. +..++.+... ++.|.+||..+++.+..+. .......+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~--~~~v~viD~~t~~~~~~i~-~~~~p~~i 89 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNN--SHVIFAIDINTFKEVGRIT-GFTSPRYI 89 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGG--GTEEEEEETTTCCEEEEEE-CCSSEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcC--CCEEEEEECcccEEEEEcC-CCCCCcEE
Confidence 378999999999887765421 11235667773 4445544432 7899999999999888775 34667899
Q ss_pred EEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEE
Q 036585 109 SLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLM 188 (304)
Q Consensus 109 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 188 (304)
+++++++.+++...++.|.+||+.+++....+...... +.......+++ .+++ +
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~------------------------~~~~~p~~i~~-~~~~-l 143 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMD------------------------MESGSTEQMVQ-YGKY-V 143 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCC------------------------TTTCBCCCEEE-ETTE-E
T ss_pred EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCcc------------------------ccCCCcceEEE-ECCE-E
Confidence 99998854444447899999999988776655432100 01113455677 4444 4
Q ss_pred EEee--CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC----------CcEEEEecCCCceeeee
Q 036585 189 LLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD----------GSVHAWSVRSGKEVASW 256 (304)
Q Consensus 189 ~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----------g~i~v~d~~~~~~~~~~ 256 (304)
+++. .++.|.++|+.+++...++.. ......++++|+|++++++..+ +.|.++|..+++....+
T Consensus 144 yv~~~~~~~~v~viD~~t~~~~~~i~~----g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~ 219 (328)
T 3dsm_A 144 YVNCWSYQNRILKIDTETDKVVDELTI----GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF 219 (328)
T ss_dssp EEEECTTCCEEEEEETTTTEEEEEEEC----SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE
T ss_pred EEEcCCCCCEEEEEECCCCeEEEEEEc----CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE
Confidence 4444 488999999999998888773 2345678999999987777654 78999999998877666
Q ss_pred ecc-CCCCceEEeCCCCcEEEEecCceEEeccCCccc
Q 036585 257 MSF-DTEPPVIKWAPGSLMFVTGSSELSFWIPDLSKL 292 (304)
Q Consensus 257 ~~~-~~~i~~~~~~~~~~~l~s~~~d~~iw~~~~~~~ 292 (304)
... ...+..++|+|+++.|+.+...+.+|+.+..++
T Consensus 220 ~~~~g~~p~~la~~~d~~~lyv~~~~v~~~d~~t~~~ 256 (328)
T 3dsm_A 220 KFKLGDWPSEVQLNGTRDTLYWINNDIWRMPVEADRV 256 (328)
T ss_dssp ECCTTCCCEEEEECTTSCEEEEESSSEEEEETTCSSC
T ss_pred ecCCCCCceeEEEecCCCEEEEEccEEEEEECCCCce
Confidence 432 346899999999998888776677777765554
No 187
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.79 E-value=6.2e-16 Score=121.99 Aligned_cols=236 Identities=7% Similarity=0.025 Sum_probs=160.5
Q ss_pred eeeEeecccCcEEEE-------eeCCCeEEEEecCCcceeeeec----ccccceeEEEEccC-CCeEEEEecCCCCCceE
Q 036585 18 EEILQSMEVGIYLVT-------ASDDESIRLYDVTAATCLKTIN----SKKYGVDLVCFTSH-PTTVIYSSKNGWDESLR 85 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~-------~~~d~~i~vw~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~~~~d~~i~ 85 (304)
...+.+.++|+++++ ...++.|.+||..+++...... ++...+..++++++ ++.+ ++.. ...|.
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~-v~~~---~~~l~ 95 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLF-VADM---RLGLL 95 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEE-EEET---TTEEE
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEE-EEEC---CCCEE
Confidence 456777788988888 6778899999988776543222 24467889999999 6544 4443 45799
Q ss_pred EEEccCceeeee-ccc----ccccEEEEEEcCCCCEEEEcccC---------------CeEEEEeCCcceeeceEEEecc
Q 036585 86 LLSLHDNKYSRY-FKG----HHDRVVLLSLCSSKDCFISGSLD---------------RTVLLWDQRAEKCQGLLRVQGR 145 (304)
Q Consensus 86 vwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~~~~ 145 (304)
+||.. ++.... ... ....+.++++.++++++++...+ +.|..||.. ++......
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~---- 169 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT---- 169 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE----
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc----
Confidence 99988 664433 221 12357899999999887776654 567777654 33221111
Q ss_pred ceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEe----cCCcEEEEe-eCCCeEEEEEcC-CCceeE--EEEeCCCC
Q 036585 146 PAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFS----NDGRLMLLT-TMEGHIHVLDSF-RGTLLS--TYNVKPVS 217 (304)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~-~~dg~i~~~d~~-~~~~~~--~~~~~~~~ 217 (304)
+......++++ |+++.++++ ..++.|.+||.. +++... .+.....+
T Consensus 170 --------------------------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 170 --------------------------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp --------------------------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred --------------------------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCC
Confidence 11234678999 999766555 567899999986 444221 22221122
Q ss_pred C-CcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEe-cCc--eEEeccCC
Q 036585 218 R-NSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTG-SSE--LSFWIPDL 289 (304)
Q Consensus 218 ~-~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~-~~d--~~iw~~~~ 289 (304)
. .....++++++|+++++...++.|.+||..+++.+..+..+...+.+++|+|+++.|+.+ ..+ +..|+++.
T Consensus 224 ~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 224 HEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 2 567889999999988887778899999998787777776666789999999999855444 443 66666554
No 188
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.79 E-value=1.8e-16 Score=126.05 Aligned_cols=244 Identities=11% Similarity=0.064 Sum_probs=170.2
Q ss_pred EeecccCcEEEEeeC-----CCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecC-------CCCCceEEEE
Q 036585 21 LQSMEVGIYLVTASD-----DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLS 88 (304)
Q Consensus 21 i~~~~~~~~l~~~~~-----d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-------~~d~~i~vwd 88 (304)
+...|+++.+++... ++.|.+.|..+++.+.++.....+ . ++++|++++++++... ..++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 345688888887765 679999999999999988865555 4 9999999999887520 0157899999
Q ss_pred ccCceeeeeccccc-------ccEEEEEEcCCCCEEEEccc--CCeEEEEeCCcceeeceEEEecc---------ceeEe
Q 036585 89 LHDNKYSRYFKGHH-------DRVVLLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGR---------PAAAY 150 (304)
Q Consensus 89 ~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~ 150 (304)
..+.+.+..+.-.. .....+.|+|||++++++.. ++.|.++|+.+.+....+...+. .....
T Consensus 116 ~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~ 195 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMH 195 (386)
T ss_dssp TTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEE
T ss_pred CCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEE
Confidence 99998877764211 13456899999999888753 68999999999887766543211 01122
Q ss_pred cCCCe----------------------------------------EEEecCCCeEEEEecCCC-----------------
Q 036585 151 DDQGL----------------------------------------VFGYEKGPLDIFSVGGDI----------------- 173 (304)
Q Consensus 151 ~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~----------------- 173 (304)
++++. ++....+.+.+.+..+..
T Consensus 196 ~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~ 275 (386)
T 3sjl_D 196 CRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERAD 275 (386)
T ss_dssp ETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHT
T ss_pred CCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccc
Confidence 22221 122223333334432221
Q ss_pred ----CCceEEEEecCCcEEEEeeC----------CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCc-EEEEe-c
Q 036585 174 ----SDANVVKFSNDGRLMLLTTM----------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISG-S 237 (304)
Q Consensus 174 ----~~v~~~~~~~~~~~l~~~~~----------dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~-~ 237 (304)
.....++++|+++.+++... .++|.++|+.+++.+.++.. ...+..++++||++ +|++. .
T Consensus 276 g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v----g~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 276 GWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM----GHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE----EEEECEEEECSSSSCEEEEEET
T ss_pred cccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC----CCCcceEEECCCCCeEEEEEcC
Confidence 12234677788887777643 24799999999999988873 34778899999996 66665 4
Q ss_pred CCCcEEEEecCCCceeeeeeccCCCCceEEeCCC
Q 036585 238 GDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPG 271 (304)
Q Consensus 238 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~ 271 (304)
.++.|.++|..+++.+.++... +..+.|.+++|
T Consensus 352 ~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 352 GDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp TTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred CCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 5899999999999999888643 44567777776
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.78 E-value=1.2e-16 Score=139.77 Aligned_cols=235 Identities=8% Similarity=0.054 Sum_probs=155.1
Q ss_pred cccCcEEEEeeCCC-----eEEEEecCCcceeeeec------ccccceeEEEEccCCCeEEEEecCCCC--CceEEEEcc
Q 036585 24 MEVGIYLVTASDDE-----SIRLYDVTAATCLKTIN------SKKYGVDLVCFTSHPTTVIYSSKNGWD--ESLRLLSLH 90 (304)
Q Consensus 24 ~~~~~~l~~~~~d~-----~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~d--~~i~vwd~~ 90 (304)
.++|++++....++ .+.+.+..+++....+. +|...+..++|||||++|+.+...+.+ ..|++||+.
T Consensus 80 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~ 159 (710)
T 2xdw_A 80 FKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVD 159 (710)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETT
T ss_pred EEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECC
Confidence 48898877665432 34444444444322221 233468899999999999988762101 289999999
Q ss_pred CceeeeecccccccEEEEEEcCCCCEEEEcccCCe----------------EEEEeCCcceeeceEEEeccceeEecCCC
Q 036585 91 DNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRT----------------VLLWDQRAEKCQGLLRVQGRPAAAYDDQG 154 (304)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~----------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 154 (304)
+++.......+ ..+..++|+||++.|+.++.++. |++|++.+++....+..
T Consensus 160 tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~------------ 226 (710)
T 2xdw_A 160 GAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCA------------ 226 (710)
T ss_dssp TTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEE------------
T ss_pred CCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEe------------
Confidence 99876543322 23677999999999998887765 99999887653222211
Q ss_pred eEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeC-----CCeEEEEEcCC------Cc-eeEEEEeCCCCCCcce
Q 036585 155 LVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTM-----EGHIHVLDSFR------GT-LLSTYNVKPVSRNSTL 222 (304)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~~~d~~~------~~-~~~~~~~~~~~~~~i~ 222 (304)
....+...+..+.|+|||++|+..+. +..|++||+.+ +. ....+. .+...+.
T Consensus 227 -------------~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~---~~~~~~~ 290 (710)
T 2xdw_A 227 -------------EFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI---DNFEGEY 290 (710)
T ss_dssp -------------CCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE---CSSSSCE
T ss_pred -------------ccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee---CCCCcEE
Confidence 11123344678999999999988764 56899999986 43 344454 2344444
Q ss_pred EEEEcCCCcEEEEecCC----CcEEEEecCCCce--eeeeeccCC--CCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 223 EASFSPEGMFVISGSGD----GSVHAWSVRSGKE--VASWMSFDT--EPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 223 ~~~~s~~~~~l~~~~~d----g~i~v~d~~~~~~--~~~~~~~~~--~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
. .|+|+|+.|+..+.. +.|.+||+.+++. ...+..|.. .+..+.|++++.++++...+ .+||.++
T Consensus 291 ~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~ 365 (710)
T 2xdw_A 291 D-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHD 365 (710)
T ss_dssp E-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEE
T ss_pred E-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEE
Confidence 3 588998887766543 3699999987642 345544543 57789999888888888777 4455443
No 190
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=6.8e-17 Score=128.41 Aligned_cols=201 Identities=9% Similarity=0.082 Sum_probs=148.4
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCcc-eeeee---------cccccceeEEEEcc-CCCeEEEEe-cCCCCCceE
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAAT-CLKTI---------NSKKYGVDLVCFTS-HPTTVIYSS-KNGWDESLR 85 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~~~~d~~i~ 85 (304)
+..+.+.++|+++++...++.|++|+..... .+..+ ..+...+..++++| ++..+++.+ . ++.|+
T Consensus 93 p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~---~~~I~ 169 (329)
T 3fvz_A 93 PHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC---NSRIV 169 (329)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS---CCEEE
T ss_pred ceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC---CCeEE
Confidence 4557888999999988889999999976442 44544 23444688999999 677777765 5 89999
Q ss_pred EEEccCceeeeeccc----------ccccEEEEEEcCC-CCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCC
Q 036585 86 LLSLHDNKYSRYFKG----------HHDRVVLLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQG 154 (304)
Q Consensus 86 vwd~~~~~~~~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 154 (304)
+|+ .+++.+..+.. +......++++|+ +.++++...++.|++||..+++....+...
T Consensus 170 ~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~----------- 237 (329)
T 3fvz_A 170 QFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA----------- 237 (329)
T ss_dssp EEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT-----------
T ss_pred EEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc-----------
Confidence 999 55666665532 2234889999998 777777778899999999877665544311
Q ss_pred eEEEecCCCeEEEEecCCCCCceEEEEec------CCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcC
Q 036585 155 LVFGYEKGPLDIFSVGGDISDANVVKFSN------DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSP 228 (304)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~ 228 (304)
.+...+..++++| +|+..++...+..|++||..+++.+..+.....+......++++|
T Consensus 238 ----------------~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~ 301 (329)
T 3fvz_A 238 ----------------SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE 301 (329)
T ss_dssp ----------------TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT
T ss_pred ----------------ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC
Confidence 2334566777777 444333344556899999999998888753334566788999999
Q ss_pred CCcEEEEecCCCcEEEEecCC
Q 036585 229 EGMFVISGSGDGSVHAWSVRS 249 (304)
Q Consensus 229 ~~~~l~~~~~dg~i~v~d~~~ 249 (304)
+|.++++...++.|++|++..
T Consensus 302 dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 302 DGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp TSEEEEEESSSCCEEEEEEEE
T ss_pred CCCEEEEECCCCEEEEEeCCc
Confidence 998888888899999999853
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.78 E-value=1.4e-14 Score=113.27 Aligned_cols=263 Identities=7% Similarity=0.035 Sum_probs=174.1
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCcceeee-ecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAATCLKT-INSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
...+...++|+++++...++.|.+||.. ++.... +..+...+..+++.+++...++... ++.|..||........
T Consensus 17 ~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~g~~~~~ 92 (299)
T 2z2n_A 17 PYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA---ANKIGRITKKGIIKEY 92 (299)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTTSCEEEE
T ss_pred ccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC---CCeEEEECCCCcEEEE
Confidence 4457777889888877668899999987 543322 2234467899999999987777665 7889999976322112
Q ss_pred ecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEE---eccceeEecCCCeEEEec--CCCeEEEE---
Q 036585 97 YFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV---QGRPAAAYDDQGLVFGYE--KGPLDIFS--- 168 (304)
Q Consensus 97 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~--- 168 (304)
.+......+..+++.+++.++++...++.|..||. +++....... .....+.+++++.++... .+.+..++
T Consensus 93 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g 171 (299)
T 2z2n_A 93 TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITESG 171 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTC
T ss_pred eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcCCC
Confidence 22224457899999999988888777889999998 4433221111 112245566666554333 23333332
Q ss_pred ------ecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcE
Q 036585 169 ------VGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSV 242 (304)
Q Consensus 169 ------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i 242 (304)
.......+..++++++|+++++...++.|.+||. +++.. .+... .....+..++++++|+.+++...++.|
T Consensus 172 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i 248 (299)
T 2z2n_A 172 DITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIP-TPNARPHAITAGAGIDLWFTEWGANKI 248 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECS-STTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred cEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECC-CCCCCceeEEECCCCCEEEeccCCceE
Confidence 2223445778999999997766667889999998 66643 33322 244678899999999877776677889
Q ss_pred EEEecCCCceeeee--eccCCCCceEEeCCCCcEEEEecCc-eEEeccCCcc
Q 036585 243 HAWSVRSGKEVASW--MSFDTEPPVIKWAPGSLMFVTGSSE-LSFWIPDLSK 291 (304)
Q Consensus 243 ~v~d~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~s~~~d-~~iw~~~~~~ 291 (304)
..||. +++. ..+ ..+...+.++++ +++.+.++...+ +..++.+..+
T Consensus 249 ~~~d~-~g~~-~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 249 GRLTS-NNII-EEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDN 297 (299)
T ss_dssp EEEET-TTEE-EEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC---
T ss_pred EEECC-CCce-EEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCccc
Confidence 99998 4443 333 344567899999 998887776555 6666665543
No 192
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.77 E-value=1.8e-15 Score=127.67 Aligned_cols=270 Identities=10% Similarity=0.039 Sum_probs=176.0
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecC--CcceeeeecccccceeEEEEc----cCCCeEEEEecCCCCCceEEEEccC
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVT--AATCLKTINSKKYGVDLVCFT----SHPTTVIYSSKNGWDESLRLLSLHD 91 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~~~~d~~i~vwd~~~ 91 (304)
...+.++|+|+++++++.|+.|.+||+. +++.+.++.... ....++|+ |+|++++++... ++.|.++|..+
T Consensus 199 p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~--~~~v~ViD~~t 275 (567)
T 1qks_A 199 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYW--PPQYVIMDGET 275 (567)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEE--TTEEEEEETTT
T ss_pred ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEcc--CCeEEEEECCC
Confidence 3468899999999999999999999995 788888777544 46789999 699999998873 79999999999
Q ss_pred ceeeeeccc----------ccc-cEEEEEEcCCCCE-EEEcccCCeEEEEeCCcceeeceEE---EeccceeEecCCCeE
Q 036585 92 NKYSRYFKG----------HHD-RVVLLSLCSSKDC-FISGSLDRTVLLWDQRAEKCQGLLR---VQGRPAAAYDDQGLV 156 (304)
Q Consensus 92 ~~~~~~~~~----------~~~-~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~ 156 (304)
.+.+..+.. |.. .+..+..++++.. ++....+|.|.++|........... ........+++++.+
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~ 355 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRY 355 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCE
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCE
Confidence 887766542 222 5677778876554 4444566888888876543221111 112223445555533
Q ss_pred E---EecCCCeEEEEecC------------CCCCceEEE-EecCCcEEE-Eee-CCCeEEEEEcCC-------CceeEEE
Q 036585 157 F---GYEKGPLDIFSVGG------------DISDANVVK-FSNDGRLML-LTT-MEGHIHVLDSFR-------GTLLSTY 211 (304)
Q Consensus 157 ~---~~~~~~~~~~~~~~------------~~~~v~~~~-~~~~~~~l~-~~~-~dg~i~~~d~~~-------~~~~~~~ 211 (304)
+ ....+.+.+++... ...+-.... ++|++..+. ++. .++.|.++|..+ .+.+.++
T Consensus 356 ~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 356 FITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEE
Confidence 2 11223333333221 111111222 578755444 443 468999999987 5677777
Q ss_pred EeCCCCCCcceEEEEcCCCcEEEEecC-------CCcEEEEecCCC-----ce-eeeee--------ccCCCCceEEeCC
Q 036585 212 NVKPVSRNSTLEASFSPEGMFVISGSG-------DGSVHAWSVRSG-----KE-VASWM--------SFDTEPPVIKWAP 270 (304)
Q Consensus 212 ~~~~~~~~~i~~~~~s~~~~~l~~~~~-------dg~i~v~d~~~~-----~~-~~~~~--------~~~~~i~~~~~~~ 270 (304)
.. ....-..+..+|++++|++... .++|.++|+.+. .. ...+. .....+..+.|+|
T Consensus 436 ~~---~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (567)
T 1qks_A 436 PA---LGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNK 512 (567)
T ss_dssp EC---SCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECT
T ss_pred ec---CCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECC
Confidence 63 2233344789999999998763 358999999876 21 12221 1235688999999
Q ss_pred CCcEEEEecC------c-eEEeccCCcccc
Q 036585 271 GSLMFVTGSS------E-LSFWIPDLSKLG 293 (304)
Q Consensus 271 ~~~~l~s~~~------d-~~iw~~~~~~~~ 293 (304)
+|+.+..+.. + |.|+|....++.
T Consensus 513 ~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~ 542 (567)
T 1qks_A 513 DGTEVWFSVWNGKDQESALVVVDDKTLELK 542 (567)
T ss_dssp TSSEEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred CCCEEEEEeecCCCCCCcEEEEECCCceEE
Confidence 9987766522 2 888887766554
No 193
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=9.1e-16 Score=119.44 Aligned_cols=198 Identities=12% Similarity=0.176 Sum_probs=141.7
Q ss_pred eeeEee-cccCcEEEEeeC-CCeEEEEecCCcceeeeecc-cccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee
Q 036585 18 EEILQS-MEVGIYLVTASD-DESIRLYDVTAATCLKTINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 94 (304)
Q Consensus 18 ~~~i~~-~~~~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~ 94 (304)
...+.+ .++++++++... ++.|++|| .+++.+..+.. +...+..++++|+++.+++... ++.|.+||.. ++.
T Consensus 79 p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~i~~~~~~-g~~ 153 (286)
T 1q7f_A 79 PNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECK---VMRVIIFDQN-GNV 153 (286)
T ss_dssp EEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETT---TTEEEEECTT-SCE
T ss_pred ceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECC---CCEEEEEcCC-CCE
Confidence 344566 466777666643 78999999 56776666643 3456889999999987766665 8899999964 454
Q ss_pred eeecc--cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCC
Q 036585 95 SRYFK--GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGD 172 (304)
Q Consensus 95 ~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
+..+. .+...+..++++|+++++++...++.|++||... +....+.. .++
T Consensus 154 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~---------------------------~g~ 205 (286)
T 1q7f_A 154 LHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQIGG---------------------------EGI 205 (286)
T ss_dssp EEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEESC---------------------------TTT
T ss_pred EEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEEcc---------------------------CCc
Confidence 44443 3445689999999998888878889999999743 22222210 112
Q ss_pred CCCceEEEEecCCcEEEEeeCCC-eEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCc
Q 036585 173 ISDANVVKFSNDGRLMLLTTMEG-HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGK 251 (304)
Q Consensus 173 ~~~v~~~~~~~~~~~l~~~~~dg-~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~ 251 (304)
...+..++++++|+++++...++ .|.+||. +++.+..+.... ....+..++++|+|+++++ +.++.|++|++....
T Consensus 206 ~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~-~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 206 TNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV-KHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp SCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS-CCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred cCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccC-CCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 24678899999999888877775 9999995 567777776421 2234678999999987777 568999999986543
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.76 E-value=4.5e-16 Score=136.84 Aligned_cols=243 Identities=14% Similarity=0.053 Sum_probs=157.3
Q ss_pred eeeEeecccCcEEEEeeCC-----CeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCC-----------C
Q 036585 18 EEILQSMEVGIYLVTASDD-----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW-----------D 81 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d-----~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-----------d 81 (304)
...+.++|||++||.++.+ ..|++||+.+++.+.. ..+...+..++|+|| +.|++++.... .
T Consensus 165 ~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 165 LDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 3457899999999887654 3699999999887653 222223467899999 99998886211 1
Q ss_pred CceEEEEccCcee----eeecccccccEEEEEEcCCCCEEEEcccCC-----eEEEEeCCccee--eceEEEeccceeEe
Q 036585 82 ESLRLLSLHDNKY----SRYFKGHHDRVVLLSLCSSKDCFISGSLDR-----TVLLWDQRAEKC--QGLLRVQGRPAAAY 150 (304)
Q Consensus 82 ~~i~vwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~--~~~~~~~~~~~~~~ 150 (304)
..|++|++.+++. +.....+...+..+.|+|||++|+..+.++ .|++||+.++.. ...+.
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~--------- 313 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI--------- 313 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE---------
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec---------
Confidence 2488999977652 222223334588999999999888776544 899999877621 12221
Q ss_pred cCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeC----CCeEEEEEcCCCc-eeEEEEeCCCCCCcceEEE
Q 036585 151 DDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTM----EGHIHVLDSFRGT-LLSTYNVKPVSRNSTLEAS 225 (304)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~-~~~~~~~~~~~~~~i~~~~ 225 (304)
.+....... ++|+|+.|+..+. ++.|.+||+.++. ....+.. .+...+..++
T Consensus 314 --------------------~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~l~~~~ 370 (741)
T 1yr2_A 314 --------------------PDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP--ESKDNLESVG 370 (741)
T ss_dssp --------------------CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC--CCSSEEEEEE
T ss_pred --------------------CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec--CCCCeEEEEE
Confidence 122223333 3588888887765 4569999998752 3333331 3444566777
Q ss_pred EcCCCcEEEEecCCCcEEEEecC-CCceeeeeec-cCCCCceEEeCCCCcEEEEe-cC---c--eEEeccCCcccccc
Q 036585 226 FSPEGMFVISGSGDGSVHAWSVR-SGKEVASWMS-FDTEPPVIKWAPGSLMFVTG-SS---E--LSFWIPDLSKLGAY 295 (304)
Q Consensus 226 ~s~~~~~l~~~~~dg~i~v~d~~-~~~~~~~~~~-~~~~i~~~~~~~~~~~l~s~-~~---d--~~iw~~~~~~~~~~ 295 (304)
++ ++.++++...|+..+||.+. +++....+.. +.+.+..+.++|++..++.. ++ . +.+|+....+...+
T Consensus 371 ~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 371 IA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred EE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 77 66778888888877776554 4555566654 35678889999998755522 22 1 56666655444433
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.75 E-value=4.2e-16 Score=136.05 Aligned_cols=234 Identities=8% Similarity=0.040 Sum_probs=152.5
Q ss_pred eecccCcEEEEeeCCC---eEEEE--ecCCcceeeeec------ccccceeEEEEccCCCeEEEEecCC--CCCceEEEE
Q 036585 22 QSMEVGIYLVTASDDE---SIRLY--DVTAATCLKTIN------SKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLS 88 (304)
Q Consensus 22 ~~~~~~~~l~~~~~d~---~i~vw--~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~vwd 88 (304)
...++|++++....++ .-.+| +...++....+. +|...+..++|||||++|+.+...+ .+..|++||
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEE
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEE
Confidence 3457899888776654 23444 443444332222 3445789999999999999665421 146899999
Q ss_pred ccCceeeeecccccccE--EEEEEcCCCCEEEEcccCCe-------------EEEEeCCcceeeceEEEeccceeEecCC
Q 036585 89 LHDNKYSRYFKGHHDRV--VLLSLCSSKDCFISGSLDRT-------------VLLWDQRAEKCQGLLRVQGRPAAAYDDQ 153 (304)
Q Consensus 89 ~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~dg~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 153 (304)
+.+++.+.. .+...+ ..++|+|||+.|+.++.|.. |++|++.++.....+.
T Consensus 154 l~tg~~~~~--~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv------------ 219 (695)
T 2bkl_A 154 VDSGEWSKV--DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVV------------ 219 (695)
T ss_dssp TTTCCBCSS--CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEE------------
T ss_pred CCCCCCcCC--cccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEE------------
Confidence 999886511 121222 67899999999999888765 9999998775432221
Q ss_pred CeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCC----eEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCC
Q 036585 154 GLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEG----HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 229 (304)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 229 (304)
+....+...+..+.|+|||++|+.++.++ .|++++..+++...... +...+....+ ++
T Consensus 220 -------------~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~----~~~~~~~~~~-~~ 281 (695)
T 2bkl_A 220 -------------HERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK----GVGAKYEVHA-WK 281 (695)
T ss_dssp -------------ECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE----CSSCCEEEEE-ET
T ss_pred -------------EecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec----CCCceEEEEe-cC
Confidence 11112345677899999999998887666 77888766655433333 3344555556 66
Q ss_pred CcEEEEec---CCCcEEEEecCCCce--eeeeecc--CCCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 230 GMFVISGS---GDGSVHAWSVRSGKE--VASWMSF--DTEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 230 ~~~l~~~~---~dg~i~v~d~~~~~~--~~~~~~~--~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
|.+++... .++.|.+||+.+++. ...+..+ ...+..++|+ ++.++++...| .+||.++
T Consensus 282 g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 282 DRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp TEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred CcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 66444443 257899999987653 2334333 4457888888 67788888777 6777654
No 196
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.75 E-value=2.3e-14 Score=115.31 Aligned_cols=226 Identities=12% Similarity=0.075 Sum_probs=154.4
Q ss_pred eEeecccCcEEEEee----------CCCeEEEEecCCcceeeeeccc-------ccceeEEEEccCCCeEEEEecCCCCC
Q 036585 20 ILQSMEVGIYLVTAS----------DDESIRLYDVTAATCLKTINSK-------KYGVDLVCFTSHPTTVIYSSKNGWDE 82 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~----------~d~~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~~~~d~ 82 (304)
-+.++|||++++++. .++.|.+||..+++.+.++... ......++|+|++++|+++.... ++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~-~~ 148 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAA-GP 148 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCC-CC
Confidence 688999999999886 3678999999998887776532 12356899999999999987411 47
Q ss_pred ceEEEEccCceeeee-cccccccEEEEEEcCCC-CEEEEcccCCeEEEEeCCcceeeceEE-----Eeccce---eEecC
Q 036585 83 SLRLLSLHDNKYSRY-FKGHHDRVVLLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGLLR-----VQGRPA---AAYDD 152 (304)
Q Consensus 83 ~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~~---~~~~~ 152 (304)
.|.++| .+++.+.. +.. .. ++.+.|++ +.+++.+.||.+.++|. +++...... ....+. ..+.+
T Consensus 149 ~v~viD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 149 AVGLVV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred eEEEEE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEe
Confidence 899999 99988777 542 22 23445544 45666778999999999 766553221 111110 01111
Q ss_pred --CCeEEEecCCCeEEEEecCC---------------------CCCceEEEEecCCcEEEEeeC----------CCeEEE
Q 036585 153 --QGLVFGYEKGPLDIFSVGGD---------------------ISDANVVKFSNDGRLMLLTTM----------EGHIHV 199 (304)
Q Consensus 153 --~~~~~~~~~~~~~~~~~~~~---------------------~~~v~~~~~~~~~~~l~~~~~----------dg~i~~ 199 (304)
...++....+.+.+.++... ......+.++|+++.++++.. .+.|.+
T Consensus 223 ~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred cCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 12222222333333333211 122334788999988887653 358999
Q ss_pred EEcCCCceeEEEEeCCCCCCcceEEEEcCCCc-EEEEec-CCCcEEEEecCCCceeeee
Q 036585 200 LDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGS-GDGSVHAWSVRSGKEVASW 256 (304)
Q Consensus 200 ~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~i~v~d~~~~~~~~~~ 256 (304)
+|+.+++.+.++. .......++|+|||+ +++++. .++.|.++|+.+++.+..+
T Consensus 303 ID~~t~~vv~~i~----~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 303 VTGLVGQTSSQIS----LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EECCCCEEEEEEE----CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 9999999999887 334678899999999 788777 5899999999999988874
No 197
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.75 E-value=7.6e-16 Score=124.68 Aligned_cols=264 Identities=9% Similarity=-0.017 Sum_probs=177.5
Q ss_pred ccCcEEEEeeCC-----CeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecC-------CCCCceEEEEccCc
Q 036585 25 EVGIYLVTASDD-----ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSLHDN 92 (304)
Q Consensus 25 ~~~~~l~~~~~d-----~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-------~~d~~i~vwd~~~~ 92 (304)
+++++++++... +.|.++|..+++.+.++.....+ .++++||++.++++... ..++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 456666665542 69999999999999998866655 89999999999888620 01678999999999
Q ss_pred eeeeecccc-------cccEEEEEEcCCCCEEEEccc--CCeEEEEeCCcceeeceEEEecc---------ceeEecCCC
Q 036585 93 KYSRYFKGH-------HDRVVLLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGR---------PAAAYDDQG 154 (304)
Q Consensus 93 ~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~ 154 (304)
+.+..+.-. ......+.|+||+++++++.. ++.|.+.|+.+.+.+..+..... ..+...+++
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG 239 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDG 239 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTS
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCC
Confidence 887766421 123456899999999998764 57899999999998877765332 112333343
Q ss_pred eEEEe--cCCCeEE-----EEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCcee--EEEEeCCC-------CC
Q 036585 155 LVFGY--EKGPLDI-----FSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL--STYNVKPV-------SR 218 (304)
Q Consensus 155 ~~~~~--~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~--~~~~~~~~-------~~ 218 (304)
.++.. ..+.+.. +..... .....+.+.+++..++..+..+.+.+.|+...... ..+..... ..
T Consensus 240 ~~~~V~~~~~~v~~~~~~~~~v~~~-p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p 318 (426)
T 3c75_H 240 SLARVDFADGETKVTNTEVFHTEDE-LLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRP 318 (426)
T ss_dssp SEEEEECCTTCCEEEECCCCSCTTS-CBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEE
T ss_pred CEEEEECCCCcEEEEeeeeeccCCC-ceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecccccccccccc
Confidence 32211 1122211 111110 01123567889888877788899999998655422 22221000 01
Q ss_pred CcceEEEEcCCCcEEEEecC----------CCcEEEEecCCCceeeeeeccCCCCceEEeCCCCc-EEEEecC-c--eEE
Q 036585 219 NSTLEASFSPEGMFVISGSG----------DGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSL-MFVTGSS-E--LSF 284 (304)
Q Consensus 219 ~~i~~~~~s~~~~~l~~~~~----------dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~~-d--~~i 284 (304)
.....++++|+++.+++... .+.|.++|+.+.+.+.++.... ....++|+||++ +++++.. + +.+
T Consensus 319 ~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~VsV 397 (426)
T 3c75_H 319 GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQTLHI 397 (426)
T ss_dssp CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCeEEE
Confidence 11223689999988777642 3579999999999998886432 578999999998 8888774 3 999
Q ss_pred eccCCccc
Q 036585 285 WIPDLSKL 292 (304)
Q Consensus 285 w~~~~~~~ 292 (304)
+|....++
T Consensus 398 ID~~t~kv 405 (426)
T 3c75_H 398 YDAATGEE 405 (426)
T ss_dssp EETTTCCE
T ss_pred EECCCCCE
Confidence 99876554
No 198
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.74 E-value=2.3e-15 Score=120.46 Aligned_cols=228 Identities=8% Similarity=0.078 Sum_probs=146.9
Q ss_pred ceeeEeecccCcEEEEeeCC---C--eEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecC-------------
Q 036585 17 SEEILQSMEVGIYLVTASDD---E--SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN------------- 78 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d---~--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~------------- 78 (304)
....+.++|+|++|+..+.+ + .|.+|++.+++.......+ . +..++|+|+++.|++++..
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 34557899999999988754 3 3778888877765544433 3 8999999999999988741
Q ss_pred -----------CCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCC-------eEEEEeCCcceeeceE
Q 036585 79 -----------GWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDR-------TVLLWDQRAEKCQGLL 140 (304)
Q Consensus 79 -----------~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~ 140 (304)
.....|++||+.+++.+..+.. . .+..+.|+|++ +++++..++ ...+|.+.+++.....
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~ 214 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMF 214 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEec
Confidence 0025799999998876455554 3 78899999999 777775432 3344443344433322
Q ss_pred EEeccceeEecCCCe--EEEecCC------CeEEEEec---------CCCCCceE-EEEecCCcEEEEeeCCCeEEEEEc
Q 036585 141 RVQGRPAAAYDDQGL--VFGYEKG------PLDIFSVG---------GDISDANV-VKFSNDGRLMLLTTMEGHIHVLDS 202 (304)
Q Consensus 141 ~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~---------~~~~~v~~-~~~~~~~~~l~~~~~dg~i~~~d~ 202 (304)
. . ......++++. ++..... ...++.+. .+...+.. +.|+ ++ ++++++.++.+++| +
T Consensus 215 ~-~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~ 289 (347)
T 2gop_A 215 E-K-VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYDGKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-I 289 (347)
T ss_dssp E-E-ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEECSSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-E
T ss_pred c-C-cceeeECCCCCEEEEEEccccCCccccceEEEECCCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-E
Confidence 2 2 22233366663 3333221 22333322 23345665 8899 88 88889999999999 8
Q ss_pred CCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcE-EEEecCCCceeeeeeccCCC
Q 036585 203 FRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSV-HAWSVRSGKEVASWMSFDTE 262 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i-~v~d~~~~~~~~~~~~~~~~ 262 (304)
.+++... +. .+...+.+++|+| .++++++.++.. .+|.+. ++ ...+..|...
T Consensus 290 ~~g~~~~-~~---~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 290 WDGEIKP-IA---KGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp ESSSEEE-EE---CSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred cCCceEE-Ee---cCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 7665533 33 2467889999999 677777666654 777765 44 4455555544
No 199
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.73 E-value=9.1e-15 Score=114.40 Aligned_cols=224 Identities=10% Similarity=0.059 Sum_probs=150.1
Q ss_pred eeEeeccc-CcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 19 EILQSMEV-GIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 19 ~~i~~~~~-~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
+...|.++ +.++++...++.|..||..+++. ..+. ....+.++++++++++ +++. +..|.+||..+++....
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l-~v~~----~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGY-VATI----GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSE-EEEE----TTEEEEEETTTTEEEEE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCE-EEEE----CCeEEEEECCCCcEEEE
Confidence 34566664 56777777789999999987665 2332 3457899999999994 4444 56899999988764332
Q ss_pred ccc----ccccEEEEEEcCCCCEEEEcccC---------CeEEEEeCCc-ceeeceEEEeccceeEecCCCeEEEecCCC
Q 036585 98 FKG----HHDRVVLLSLCSSKDCFISGSLD---------RTVLLWDQRA-EKCQGLLRVQGRPAAAYDDQGLVFGYEKGP 163 (304)
Q Consensus 98 ~~~----~~~~v~~~~~~~~~~~l~~~~~d---------g~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
... ....+..+++.|+|+++++...+ ..-.+|.+.. ++......
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~---------------------- 146 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD---------------------- 146 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE----------------------
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee----------------------
Confidence 221 12457889999999966654221 2223443332 21111111
Q ss_pred eEEEEecCCCCCceEEEEecCCcEEEE-eeCCCeEEEEEc--CCCcee--EEEEeCCCCCCcceEEEEcCCCcEEEEecC
Q 036585 164 LDIFSVGGDISDANVVKFSNDGRLMLL-TTMEGHIHVLDS--FRGTLL--STYNVKPVSRNSTLEASFSPEGMFVISGSG 238 (304)
Q Consensus 164 ~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~~~d~--~~~~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 238 (304)
.....+.++|+|+++.|++ .+.++.|.+||+ .++... ..+............++++++|++.++...
T Consensus 147 --------~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~ 218 (297)
T 3g4e_A 147 --------QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN 218 (297)
T ss_dssp --------EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET
T ss_pred --------ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC
Confidence 1123567999999987755 455789999997 455542 222221123356778999999988777777
Q ss_pred CCcEEEEecCCCceeeeeeccCCCCceEEeC-CCCcEEEEec
Q 036585 239 DGSVHAWSVRSGKEVASWMSFDTEPPVIKWA-PGSLMFVTGS 279 (304)
Q Consensus 239 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~s~~ 279 (304)
++.|..||..+++.+..+..+...+++++|. |+++.|+.++
T Consensus 219 ~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 219 GGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp TTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEE
T ss_pred CCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEc
Confidence 7889999998899988888777789999998 8877665444
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.73 E-value=1.6e-14 Score=117.89 Aligned_cols=236 Identities=8% Similarity=0.028 Sum_probs=157.8
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCC--ceEEEEccCcee
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE--SLRLLSLHDNKY 94 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~--~i~vwd~~~~~~ 94 (304)
.+..+.+.++|+++++...++.|++||.++++......... ... ++|+++++.|+++.. ++ .|.+++...+..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~---~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGW---EGTHTVYVYMKASGWA 206 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBS---STTCEEEEEEGGGTTC
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEec---CCCceEEEEEcCCCce
Confidence 34567788899988888888999999998777655544432 344 999999999888876 44 788888876544
Q ss_pred eeec----ccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEec
Q 036585 95 SRYF----KGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVG 170 (304)
Q Consensus 95 ~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
...+ ......+.+++++|++..|+.+..++.|+.||..++... .+..... .
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~------------------------~ 261 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLEL------------------------S 261 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-EEEECCC------------------------C
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-EEecccc------------------------c
Confidence 3333 213456788999995555666777889999998866432 1110000 0
Q ss_pred CCCCC--ceEEEEecC-CcEEEEeeCCCeEEEEEcCCCceeEEEEeCC---C---------CCCcceEEEEcCCCcEEEE
Q 036585 171 GDISD--ANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP---V---------SRNSTLEASFSPEGMFVIS 235 (304)
Q Consensus 171 ~~~~~--v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~---~---------~~~~i~~~~~s~~~~~l~~ 235 (304)
+.... ...++|+|+ +.++++-..++.|+.|+.... ...+.... + .-.....++++|+|+++++
T Consensus 262 g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyva 339 (409)
T 3hrp_A 262 GSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIV 339 (409)
T ss_dssp SCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEE
T ss_pred CCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEE
Confidence 11111 138999995 665666667889999997543 23333211 0 0134778999999997777
Q ss_pred ec-CCCcEEEEecCCCceeeeeecc---------------CCCCceEEeCCCCcEEEEecCceEEe
Q 036585 236 GS-GDGSVHAWSVRSGKEVASWMSF---------------DTEPPVIKWAPGSLMFVTGSSELSFW 285 (304)
Q Consensus 236 ~~-~dg~i~v~d~~~~~~~~~~~~~---------------~~~i~~~~~~~~~~~l~s~~~d~~iw 285 (304)
-. .++.|+.|++.+++. ..+.++ -.....++++|++.++++-..+-+|+
T Consensus 340 d~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir 404 (409)
T 3hrp_A 340 DGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIR 404 (409)
T ss_dssp ETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEE
T ss_pred eCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEE
Confidence 77 789999999877764 344333 23578899999987777666654443
No 201
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.72 E-value=5e-15 Score=118.98 Aligned_cols=219 Identities=7% Similarity=0.023 Sum_probs=141.3
Q ss_pred CCCeEEEEecC---CCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcc----------cCCeEEEEeCCcc
Q 036585 68 HPTTVIYSSKN---GWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGS----------LDRTVLLWDQRAE 134 (304)
Q Consensus 68 ~~~~l~~~~~~---~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~ 134 (304)
+++++++.... ..|+.|.+||..+++.+..+..+..+ .++|+|++++++++. .++.|.+||+.+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 55555555321 11779999999999888887766555 899999999998876 3678999999988
Q ss_pred eeeceEEEe--------ccceeEecCCCeEE--E-ec-CCCeEEEEecCCCC--------CceEEEEecCC-cEEEEeeC
Q 036585 135 KCQGLLRVQ--------GRPAAAYDDQGLVF--G-YE-KGPLDIFSVGGDIS--------DANVVKFSNDG-RLMLLTTM 193 (304)
Q Consensus 135 ~~~~~~~~~--------~~~~~~~~~~~~~~--~-~~-~~~~~~~~~~~~~~--------~v~~~~~~~~~-~~l~~~~~ 193 (304)
+....+... ....+.+++++..+ . .. .+.+.++++....- ....+.+.|++ ..+++.+.
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~ 171 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICG 171 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEET
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECC
Confidence 888777653 23457888888443 2 22 45677776543210 00012233433 33444444
Q ss_pred CCeEEEEEcCC-Ccee-------------------------------------------------EEEEeCCC-------
Q 036585 194 EGHIHVLDSFR-GTLL-------------------------------------------------STYNVKPV------- 216 (304)
Q Consensus 194 dg~i~~~d~~~-~~~~-------------------------------------------------~~~~~~~~------- 216 (304)
||.+.+|++.. ++.. ..+.....
T Consensus 172 dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 251 (361)
T 2oiz_A 172 DGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNW 251 (361)
T ss_dssp TSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTC
T ss_pred CCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccccccc
Confidence 45444444432 2211 11110000
Q ss_pred CCCcceEEEEcCCCcEEEEecC-----------CCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc-eEE
Q 036585 217 SRNSTLEASFSPEGMFVISGSG-----------DGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE-LSF 284 (304)
Q Consensus 217 ~~~~i~~~~~s~~~~~l~~~~~-----------dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-~~i 284 (304)
.......++|+|+++.++++.. .+.|.+||+.+++.+..+..+. +.+++|+|||++|++++.+ +.+
T Consensus 252 ~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~~~v~v 329 (361)
T 2oiz_A 252 VPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDGGNVNV 329 (361)
T ss_dssp EECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECSSCEEE
T ss_pred ccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCCCeEEE
Confidence 0001112689999888777542 3479999999999999998776 9999999999999888767 999
Q ss_pred eccCCc
Q 036585 285 WIPDLS 290 (304)
Q Consensus 285 w~~~~~ 290 (304)
|+....
T Consensus 330 ~D~~t~ 335 (361)
T 2oiz_A 330 YDISQP 335 (361)
T ss_dssp EECSSS
T ss_pred EECCCC
Confidence 998766
No 202
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.72 E-value=4.2e-14 Score=111.10 Aligned_cols=222 Identities=10% Similarity=0.049 Sum_probs=148.4
Q ss_pred eeEeecccCc-EEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 19 EILQSMEVGI-YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 19 ~~i~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
+...+.++|+ ++++...++.|..|+. +++ ...+..+...+..++++++++.+++... ++.|.+|+.. ++....
T Consensus 48 egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~---~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHG---RRAITRSDAD-GQAHLL 121 (305)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETT---TTEEEEECTT-SCEEEE
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECC---CCEEEEECCC-CCEEEE
Confidence 4567888888 6667777889999997 444 3445555667899999999986655544 6789999986 543222
Q ss_pred cccc----cccEEEEEEcCCCCEEEE----ccc-------------CCeEEEEeCCcceeeceEEEeccceeEecCCCeE
Q 036585 98 FKGH----HDRVVLLSLCSSKDCFIS----GSL-------------DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLV 156 (304)
Q Consensus 98 ~~~~----~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (304)
.... ...+..+++.|+|+++++ |.. .+.|..+|..+++..... .
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~------------- 186 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--D------------- 186 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--E-------------
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--c-------------
Confidence 1111 124567999999998886 432 245777776555433221 0
Q ss_pred EEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCC------CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCC
Q 036585 157 FGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTME------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 230 (304)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 230 (304)
....+.++|+|+++.|+++... +.|++|++..+..................++++++|
T Consensus 187 ----------------~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G 250 (305)
T 3dr2_A 187 ----------------LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGG 250 (305)
T ss_dssp ----------------ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTS
T ss_pred ----------------CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCC
Confidence 0234679999999988877665 789999987654211111111123445678999999
Q ss_pred cEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc
Q 036585 231 MFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE 281 (304)
Q Consensus 231 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d 281 (304)
++. +++.++ |.+|+. +++.+..+..+. .+.+++|+|+++.|+.++.+
T Consensus 251 ~lw-v~~~~g-v~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 251 WLW-SSSGTG-VCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp CEE-ECCSSE-EEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETT
T ss_pred CEE-EecCCc-EEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCC
Confidence 854 444454 999997 677777776554 58999999998877776665
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.71 E-value=2.8e-13 Score=105.93 Aligned_cols=258 Identities=9% Similarity=0.048 Sum_probs=172.3
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcceee-eecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceee
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYS 95 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~ 95 (304)
....+...++|+++++...++.|.+||.. ++... .+......+..+++.+++...++... ++.|..+|.. ++..
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG---ANKIGKLSKK-GGFT 95 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT---TTEEEEECTT-SCEE
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC---CCeEEEECCC-CCeE
Confidence 34557777889888887778899999987 55433 22233357889999999987776655 7889999987 5432
Q ss_pred e-ecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEe----ccceeEecCCCeEEEec--CCCeEEEE
Q 036585 96 R-YFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ----GRPAAAYDDQGLVFGYE--KGPLDIFS 168 (304)
Q Consensus 96 ~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~ 168 (304)
. .+......+.++++.++++++++...++.|..+|.. ++.. .+... ....+.+++++.++... .+.+..++
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 2 222234578999999999888887778899999987 4433 22111 12245566666554333 22333332
Q ss_pred e---------cCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC
Q 036585 169 V---------GGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD 239 (304)
Q Consensus 169 ~---------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 239 (304)
. ......+..++++++|++.++....+.|.+||. +++... +... .....+.+++++++|++.++...+
T Consensus 174 ~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~-~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 174 NTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDIP-TPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp TTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECS-STTCCEEEEEECSTTCEEEEETTT
T ss_pred CCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EECC-CCCCCceEEEECCCCCEEEeccCC
Confidence 2 223345788999999987766666788999998 555433 2221 234567899999999877777677
Q ss_pred CcEEEEecCCCceee-eeeccCCCCceEEeCCCCcEEEEecCceEEecc
Q 036585 240 GSVHAWSVRSGKEVA-SWMSFDTEPPVIKWAPGSLMFVTGSSELSFWIP 287 (304)
Q Consensus 240 g~i~v~d~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~s~~~d~~iw~~ 287 (304)
+.|..||. +++... .+......+.++++.++|++.++.. . .|+.+
T Consensus 251 ~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~ 296 (300)
T 2qc5_A 251 NQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKL 296 (300)
T ss_dssp TEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEE
T ss_pred CeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEe
Confidence 89999998 454322 2233456689999999998777665 5 44443
No 204
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.71 E-value=7.8e-16 Score=122.95 Aligned_cols=172 Identities=9% Similarity=0.034 Sum_probs=130.2
Q ss_pred ceeEEEEccCCCeEEEEecCCCCCceEEEEccCce---------e-eeecccccccEEEEEEcCCCCEEEEcccCCeEEE
Q 036585 59 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK---------Y-SRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLL 128 (304)
Q Consensus 59 ~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~---------~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 128 (304)
+++.+++++....+++++. + .+.+|++.+.+ . ......+.. |+.++| ++++|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~---~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASG---S-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEET---T-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCC---C-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 6899999999999999985 5 66679876543 1 111223566 999999 88999998 8899999
Q ss_pred EeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCcee
Q 036585 129 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLL 208 (304)
Q Consensus 129 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 208 (304)
||+++........ .+...+..+.+.+. .+++++.||.|.+||+.+++..
T Consensus 111 ~dv~sl~~~~~~~-----------------------------~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~ 159 (388)
T 1xip_A 111 LDLEELSEFRTVT-----------------------------SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK 159 (388)
T ss_dssp EESSSTTCEEEEE-----------------------------ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE
T ss_pred EEchhhhccCccc-----------------------------eeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc
Confidence 9998766433332 12234556665544 2888899999999999987764
Q ss_pred EEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCce--eeee------e---ccCCCCceEEeCCCCcEEEE
Q 036585 209 STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKE--VASW------M---SFDTEPPVIKWAPGSLMFVT 277 (304)
Q Consensus 209 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~------~---~~~~~i~~~~~~~~~~~l~s 277 (304)
. ....|++++|||+| ++.|..||.+++|+...++. ..++ . +|...|.+|.|.+++.++++
T Consensus 160 ~-------~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 160 Q-------LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp E-------EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred c-------ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 3 23579999999999 67788899999999877664 4445 2 36788999999999999887
Q ss_pred e
Q 036585 278 G 278 (304)
Q Consensus 278 ~ 278 (304)
-
T Consensus 231 y 231 (388)
T 1xip_A 231 F 231 (388)
T ss_dssp E
T ss_pred E
Confidence 3
No 205
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=5.5e-15 Score=114.04 Aligned_cols=184 Identities=8% Similarity=0.037 Sum_probs=143.7
Q ss_pred CCCeEEEEecCCCCCceEEEEccCceeeeeccccc-ccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccc
Q 036585 68 HPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHH-DRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP 146 (304)
Q Consensus 68 ~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 146 (304)
.++.|++++. ++.|.+||.++++.+..+..+. ..+.++.+.|+|+++++ .++.|+.||. +++.+..+...
T Consensus 4 ~~~~lv~~~~---~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~--- 74 (276)
T 3no2_A 4 PQHLLVGGSG---WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAP--- 74 (276)
T ss_dssp CCEEEEECTT---CSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECC---
T ss_pred CCcEEEeeCC---CCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCC---
Confidence 4567777776 9999999999999998888665 46889999999998883 4678999998 77776665521
Q ss_pred eeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeC-CCeEEEEEcCCCceeEEEEeCCC---CCCcce
Q 036585 147 AAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTM-EGHIHVLDSFRGTLLSTYNVKPV---SRNSTL 222 (304)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~~~~---~~~~i~ 222 (304)
....+.++.+.|+|+++++.+. ++.+..+|. +++.+.++..... +.....
T Consensus 75 -------------------------~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~ 128 (276)
T 3no2_A 75 -------------------------AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFR 128 (276)
T ss_dssp -------------------------TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCS
T ss_pred -------------------------CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCccccccc
Confidence 1134667889999999999887 788888885 7888887764321 112345
Q ss_pred EEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 223 EASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 223 ~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
.+++.++|+++++...++.|..||.+ ++.+.++... ..+.++...++++++++++.+ +..++.+
T Consensus 129 ~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 129 QINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp CCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTT
T ss_pred CceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCc
Confidence 56789999999999999999999987 9998888654 456778889999999888776 6666665
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.70 E-value=1.7e-15 Score=121.08 Aligned_cols=174 Identities=16% Similarity=0.162 Sum_probs=133.1
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCcc---------e-eeeecccccceeEEEEccCCCeEEEEecCCCCCceEEE
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAAT---------C-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLL 87 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~---------~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vw 87 (304)
...++.++...++++|+.++ +++|++++.+ . ......+.. |+.++| +++.|+++ . ++.|++|
T Consensus 40 ~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~---~~~l~v~ 111 (388)
T 1xip_A 40 LQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-T---RNALYSL 111 (388)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-E---SSEEEEE
T ss_pred ccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-c---CCcEEEE
Confidence 45677888888999999985 7779976543 1 111223455 999999 99999998 5 8999999
Q ss_pred EccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEE
Q 036585 88 SLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIF 167 (304)
Q Consensus 88 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
|+.+.........|..++.++.+.+.. +++++.||.+.+||+.++..... .
T Consensus 112 dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~~-~-------------------------- 162 (388)
T 1xip_A 112 DLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQL-A-------------------------- 162 (388)
T ss_dssp ESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEEE-E--------------------------
T ss_pred EchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCccccc-c--------------------------
Confidence 998766555566677788888877543 88889999999999987765321 1
Q ss_pred EecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCce--eEEEEeC------CCCCCcceEEEEcCCCcEEEEe
Q 036585 168 SVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL--LSTYNVK------PVSRNSTLEASFSPEGMFVISG 236 (304)
Q Consensus 168 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~------~~~~~~i~~~~~s~~~~~l~~~ 236 (304)
..|++++|||+| +++|..||++++|+...++. ..++..+ ..+...|.+++|.+++.++++-
T Consensus 163 ------~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 163 ------QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp ------ESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred ------CCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 368999999999 67899999999999887775 4455321 1356889999999999998863
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.69 E-value=9.4e-15 Score=128.47 Aligned_cols=235 Identities=13% Similarity=0.097 Sum_probs=147.5
Q ss_pred eecccCcEEEEeeCCCe---EEEEecC-----Ccceeeee------cccccceeEEEEccCCCeEEEEecCCCC--CceE
Q 036585 22 QSMEVGIYLVTASDDES---IRLYDVT-----AATCLKTI------NSKKYGVDLVCFTSHPTTVIYSSKNGWD--ESLR 85 (304)
Q Consensus 22 ~~~~~~~~l~~~~~d~~---i~vw~~~-----~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~~~~d--~~i~ 85 (304)
...++|++++....++. -.+|... .++....+ .+|...+..++|||||++|+.+...+.+ ..|+
T Consensus 113 ~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~ 192 (741)
T 1yr2_A 113 LPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVK 192 (741)
T ss_dssp CCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEE
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEE
Confidence 33488998887765543 4555543 33322211 1233468899999999999988752111 4699
Q ss_pred EEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCe--------------EEEEeCCcceeeceEEEeccceeEec
Q 036585 86 LLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRT--------------VLLWDQRAEKCQGLLRVQGRPAAAYD 151 (304)
Q Consensus 86 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------i~iwd~~~~~~~~~~~~~~~~~~~~~ 151 (304)
+||+.+++.+... .+...+..++|+|| +.|+.++.++. |++|++.++.....+.
T Consensus 193 v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv---------- 260 (741)
T 1yr2_A 193 FVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPV---------- 260 (741)
T ss_dssp EEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEE----------
T ss_pred EEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEE----------
Confidence 9999999875431 12222357899999 88888776553 7888876654322211
Q ss_pred CCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCC-----eEEEEEcCCC--ceeEEEEeCCCCCCcceEE
Q 036585 152 DQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEG-----HIHVLDSFRG--TLLSTYNVKPVSRNSTLEA 224 (304)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~--~~~~~~~~~~~~~~~i~~~ 224 (304)
+....+...+..+.|+|||++|+..+.++ .|++||+.++ +....+. .+.......
T Consensus 261 ---------------~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~---~~~~~~~~~ 322 (741)
T 1yr2_A 261 ---------------FATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI---PDLKAQWDF 322 (741)
T ss_dssp ---------------ECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE---CSSSSCEEE
T ss_pred ---------------eccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec---CCCCceEEE
Confidence 11112233467899999999988877544 8999999877 3134444 233344444
Q ss_pred EEcCCCcEEEEecC----CCcEEEEecCCCc-eeee-eeccCCCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 225 SFSPEGMFVISGSG----DGSVHAWSVRSGK-EVAS-WMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 225 ~~s~~~~~l~~~~~----dg~i~v~d~~~~~-~~~~-~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
++|+|+.|+..+. ++.|.+||+.++. .... +..+...+..+.|+ ++.++++...+ .+||.++
T Consensus 323 -~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 323 -VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 3588888877764 3459999998752 3333 34444556677887 56677777766 5666554
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.68 E-value=1.6e-13 Score=108.82 Aligned_cols=221 Identities=14% Similarity=0.073 Sum_probs=147.4
Q ss_pred eeEeeccc-CcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 19 EILQSMEV-GIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 19 ~~i~~~~~-~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
+...+.++ +.++++...++.|..||..+++.. .+. ....+.+++++++++.+++. . + .|.+||..+++....
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~---~-gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D---D-GLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T---T-EEEEEETTTCCEEEE
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C---C-CEEEEECCCCcEEEE
Confidence 45677786 556667767889999999876543 232 23578999999999876654 3 4 499999988764332
Q ss_pred ccc----ccccEEEEEEcCCCCEEEEccc------CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEE
Q 036585 98 FKG----HHDRVVLLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIF 167 (304)
Q Consensus 98 ~~~----~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
... ....+..+.++|+|+++++... .+.|..++ +++......
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~-------------------------- 176 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA-------------------------- 176 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--------------------------
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--------------------------
Confidence 211 1246889999999987665432 24455555 333221111
Q ss_pred EecCCCCCceEEEEecCCcEEEEe-eCCCeEEEEEcC--CC-cee--EEEEeCCCCCCcceEEEEcCCCcEEEEecCCCc
Q 036585 168 SVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDSF--RG-TLL--STYNVKPVSRNSTLEASFSPEGMFVISGSGDGS 241 (304)
Q Consensus 168 ~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~--~~-~~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 241 (304)
.......++|+|+++.++++ +.++.|.+||+. ++ +.. ..+............++++++|++.++...++.
T Consensus 177 ----~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~ 252 (326)
T 2ghs_A 177 ----DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA 252 (326)
T ss_dssp ----EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE
T ss_pred ----CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE
Confidence 11234679999999877655 457899999986 55 321 222211123455678999999987777666788
Q ss_pred EEEEecCCCceeeeeeccCCCCceEEeC-CCCcEEEEec
Q 036585 242 VHAWSVRSGKEVASWMSFDTEPPVIKWA-PGSLMFVTGS 279 (304)
Q Consensus 242 i~v~d~~~~~~~~~~~~~~~~i~~~~~~-~~~~~l~s~~ 279 (304)
|.+||. +++.+..+..+...+++++|+ |++..|+.++
T Consensus 253 v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 253 VDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred EEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 999998 677777777666679999998 8877664443
No 209
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.68 E-value=1.7e-14 Score=114.95 Aligned_cols=233 Identities=9% Similarity=-0.003 Sum_probs=157.0
Q ss_pred cEEEEeeCCC----eEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecC-------CCCCceEEEEccCceeee
Q 036585 28 IYLVTASDDE----SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN-------GWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 28 ~~l~~~~~d~----~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-------~~d~~i~vwd~~~~~~~~ 96 (304)
+.+++...++ +|.++|..+++.+.++.....+ .+.++|+++.++++... ..++.|.+||+.+++.+.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred eEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 3444444455 7889999999999998866656 79999999999998620 016899999999999888
Q ss_pred ecccc-------cccEEEEEEcCCCCEEEEccc--CCeEEE--EeCCcceeeceEEEec---------cceeEecCCCe-
Q 036585 97 YFKGH-------HDRVVLLSLCSSKDCFISGSL--DRTVLL--WDQRAEKCQGLLRVQG---------RPAAAYDDQGL- 155 (304)
Q Consensus 97 ~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~---------~~~~~~~~~~~- 155 (304)
.+... ......+.++|||++++++.. +..+.+ +|+.+ ...+...+ ...+...+++.
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSC
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCE
Confidence 87533 123467899999998888764 457888 89876 22221110 01111111111
Q ss_pred --------------------------------------EEEecCCCeEEEEecCCC---------------------CCc
Q 036585 156 --------------------------------------VFGYEKGPLDIFSVGGDI---------------------SDA 176 (304)
Q Consensus 156 --------------------------------------~~~~~~~~~~~~~~~~~~---------------------~~v 176 (304)
++... +.+.+.+..... ...
T Consensus 188 ~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~ 266 (368)
T 1mda_H 188 AASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGF 266 (368)
T ss_dssp EEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSS
T ss_pred EEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcc
Confidence 11111 334444442211 111
Q ss_pred eEEEEecCCcEEEEeeC-C--------CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcE-EEEec-CCCcEEEE
Q 036585 177 NVVKFSNDGRLMLLTTM-E--------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMF-VISGS-GDGSVHAW 245 (304)
Q Consensus 177 ~~~~~~~~~~~l~~~~~-d--------g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~-~dg~i~v~ 245 (304)
..++++|+++.++++.. . +.+.++|+.+.+.+.++.. ......++|+|||++ +++.. .++.|.++
T Consensus 267 ~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v----g~~p~gi~~s~Dg~~l~va~~~~~~~VsVI 342 (368)
T 1mda_H 267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN----GHDSDAIIAAQDGASDNYANSAGTEVLDIY 342 (368)
T ss_dssp SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE----EEEECEEEECCSSSCEEEEEETTTTEEEEE
T ss_pred eeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC----CCCcceEEECCCCCEEEEEccCCCCeEEEE
Confidence 22789999998887643 2 3567999999999888873 235788999999984 55555 58999999
Q ss_pred ecCCCceeeeeeccCCCCceEEeCCC
Q 036585 246 SVRSGKEVASWMSFDTEPPVIKWAPG 271 (304)
Q Consensus 246 d~~~~~~~~~~~~~~~~i~~~~~~~~ 271 (304)
|+.+++.+.++.... ....+++.+.
T Consensus 343 D~~t~kvv~~I~vg~-~P~~i~~~~~ 367 (368)
T 1mda_H 343 DAASDQDQSSVELDK-GPESLSVQNE 367 (368)
T ss_dssp ESSSCEEEEECCCCS-CCCEEECCCC
T ss_pred ECCCCcEEEEEECCC-CCCEEEeecC
Confidence 999999998887553 4567776553
No 210
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.68 E-value=1.8e-14 Score=116.62 Aligned_cols=228 Identities=12% Similarity=0.161 Sum_probs=154.8
Q ss_pred eEeecccCcEEEEee----------CCCeEEEEecCCcceeeeeccc-------ccceeEEEEccCCCeEEEEecCCCCC
Q 036585 20 ILQSMEVGIYLVTAS----------DDESIRLYDVTAATCLKTINSK-------KYGVDLVCFTSHPTTVIYSSKNGWDE 82 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~----------~d~~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~~~~d~ 82 (304)
-+.++|||++++++. .++.|.++|..+++.+.++... ......+.|+||+++++++... .++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-~~~ 200 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-PAP 200 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-SSC
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC-CCC
Confidence 688999999888876 3678999999999988877532 1345678999999999998741 157
Q ss_pred ceEEEEccCceeeeecccccccEEEEEEcCCC-CEEEEcccCCeEEEEeCCcceeece----EEEeccc---eeEecCCC
Q 036585 83 SLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSK-DCFISGSLDRTVLLWDQRAEKCQGL----LRVQGRP---AAAYDDQG 154 (304)
Q Consensus 83 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~---~~~~~~~~ 154 (304)
.|.+.|+.+++.+..+.-. +. ....|++ ..+++.+.||.+.+.++.+++.... +.....+ ...+.+++
T Consensus 201 ~VsVID~~t~kvv~~I~v~-g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg 276 (426)
T 3c75_H 201 AVGVVDLEGKTFDRMLDVP-DC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS 276 (426)
T ss_dssp EEEEEETTTTEEEEEEECC-SE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT
T ss_pred eEEEEECCCCeEEEEEEcC-Cc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC
Confidence 8999999999888776531 11 2223322 4555566677777667644443311 1111111 12223332
Q ss_pred --eEEEecCCCeEEEEecCCC---------------------CCceEEEEecCCcEEEEeeC----------CCeEEEEE
Q 036585 155 --LVFGYEKGPLDIFSVGGDI---------------------SDANVVKFSNDGRLMLLTTM----------EGHIHVLD 201 (304)
Q Consensus 155 --~~~~~~~~~~~~~~~~~~~---------------------~~v~~~~~~~~~~~l~~~~~----------dg~i~~~d 201 (304)
.++....+.+.+.+..+.. .....++++|+++.+++... ++.|.++|
T Consensus 277 ~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 277 GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 3333334445555543211 12233789999888777643 35799999
Q ss_pred cCCCceeEEEEeCCCCCCcceEEEEcCCCc-EEEEec-CCCcEEEEecCCCceeeee
Q 036585 202 SFRGTLLSTYNVKPVSRNSTLEASFSPEGM-FVISGS-GDGSVHAWSVRSGKEVASW 256 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~i~v~d~~~~~~~~~~ 256 (304)
+.+.+.+.++.. ......+.|+||++ ++++.. .++.|.++|+.+++.+.++
T Consensus 357 ~~T~kvv~~I~v----g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 357 AETGERINKIEL----GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTTCCEEEEEEE----EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCCeEEEEEEC----CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 999999999873 23577899999999 888887 5899999999999999887
No 211
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=1.3e-14 Score=111.90 Aligned_cols=199 Identities=9% Similarity=0.012 Sum_probs=139.1
Q ss_pred eeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 18 EEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 18 ~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
...+.+.++|+++++.. ++.|.+||..+.............+..+++.++++.+++... ++.|.+|+..+......
T Consensus 69 p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 69 PQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRG---NNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp CCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGG---GTEEEEECTTCCSCEEC
T ss_pred cceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECC---CCEEEEEECCCceeEee
Confidence 34567778888666665 889999998765433222223356889999999986666665 78999997665443322
Q ss_pred cccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCce
Q 036585 98 FKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDAN 177 (304)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 177 (304)
.......+.++++.++++++++...++.|.+||........... .....+.
T Consensus 145 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~-----------------------------~~~~~p~ 195 (270)
T 1rwi_B 145 PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF-----------------------------TDITAPW 195 (270)
T ss_dssp CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC-----------------------------SSCCSEE
T ss_pred ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc-----------------------------cCCCCce
Confidence 22233467889999999877777778899999987654321100 1224567
Q ss_pred EEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCce
Q 036585 178 VVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKE 252 (304)
Q Consensus 178 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~ 252 (304)
.++++++|.++++...++.|.+||........ .. ......+.+++++|+|+++++...++.|+++++...+.
T Consensus 196 ~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~--~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 196 GIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LP--FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp EEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CC--CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred EEEECCCCCEEEEECCCCcEEEEcCCCCccee-ec--cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 89999999777777778899999986654322 11 12335688999999999888888899999999876543
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.66 E-value=3.1e-14 Score=124.17 Aligned_cols=238 Identities=15% Similarity=0.102 Sum_probs=147.4
Q ss_pred eeEeecccCcEEEEe-----eCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecC----------CCCCc
Q 036585 19 EILQSMEVGIYLVTA-----SDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKN----------GWDES 83 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~-----~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~----------~~d~~ 83 (304)
..+.++|||++||.+ +....|++||+.+++.+.. ..+......++|+ |++.|+.++.. +....
T Consensus 132 ~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC-------CCCCE
T ss_pred EEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccccCCCcE
Confidence 346899999998843 3335799999999986543 1111123578999 99999999872 11134
Q ss_pred eEEEEccCce----eeeeccc-ccccEEEEEEcCCCCEEEEcc----cCCeEEEEeCCccee-eceEEEeccceeEecCC
Q 036585 84 LRLLSLHDNK----YSRYFKG-HHDRVVLLSLCSSKDCFISGS----LDRTVLLWDQRAEKC-QGLLRVQGRPAAAYDDQ 153 (304)
Q Consensus 84 i~vwd~~~~~----~~~~~~~-~~~~v~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~ 153 (304)
|++|++.++. .+..... |...+..+.|+||+++|+... ....|+++|+.++.. ...+.
T Consensus 210 v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~------------ 277 (693)
T 3iuj_A 210 VYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ------------ 277 (693)
T ss_dssp EEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE------------
T ss_pred EEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe------------
Confidence 9999997754 2333333 445578899999999875533 235899999876532 11221
Q ss_pred CeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeC----CCeEEEEEcCCCce--eEEEEeCCCCCCcceEEEEc
Q 036585 154 GLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTM----EGHIHVLDSFRGTL--LSTYNVKPVSRNSTLEASFS 227 (304)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~~--~~~~~~~~~~~~~i~~~~~s 227 (304)
.+....... ++++|..|+..+. .+.|..+|+.++.. ...+. .+...+. .|+
T Consensus 278 -----------------~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~---~~~~~~~--~~s 334 (693)
T 3iuj_A 278 -----------------GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI---PERQQVL--TVH 334 (693)
T ss_dssp -----------------CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE---CCCSSCE--EEE
T ss_pred -----------------CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe---cCCCCEE--EEE
Confidence 122233333 6666665555443 36899999987654 23444 2344444 889
Q ss_pred CCCcEEEEecCCC---cEEEEecCCCceeeeee-ccCCCCceEEeCCCCcEEEEecCc------eEEeccCCccccc
Q 036585 228 PEGMFVISGSGDG---SVHAWSVRSGKEVASWM-SFDTEPPVIKWAPGSLMFVTGSSE------LSFWIPDLSKLGA 294 (304)
Q Consensus 228 ~~~~~l~~~~~dg---~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~s~~~d------~~iw~~~~~~~~~ 294 (304)
+++++|+....++ .|++||+..+ ....+. ...+.+..+.++|++..++....+ +..|+++..+...
T Consensus 335 ~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~ 410 (693)
T 3iuj_A 335 SGSGYLFAEYMVDATARVEQFDYEGK-RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISL 410 (693)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTSC-EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEE
T ss_pred EECCEEEEEEEECCeeEEEEEECCCC-eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEE
Confidence 9998887765443 6899998744 344443 234456677788887655443322 4455554444333
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.64 E-value=1.5e-16 Score=128.09 Aligned_cols=204 Identities=16% Similarity=0.032 Sum_probs=122.1
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccc-c
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHD-R 104 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~-~ 104 (304)
++..+++++.|+.|+.||..+++.+.++.. ..+.+..+..++..+++++. |+.|+.||..+++.+..+..+.. .
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~---dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPN---DGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTT---TCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCC---CCEEEEEECCCCceeeeeeccCccc
Confidence 578999999999999999999999888776 45666666677777777766 99999999999887665543322 1
Q ss_pred EE-EEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEec
Q 036585 105 VV-LLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSN 183 (304)
Q Consensus 105 v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 183 (304)
+. +..+. .+..+++++.++.++.||.++++....+.... ...++|
T Consensus 83 ~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---------------------------------~~~~~p 128 (369)
T 2hz6_A 83 VQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---------------------------------ADSLSP 128 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC---------------------------------------------------
T ss_pred cccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---------------------------------cccccc
Confidence 11 00111 34578888899999999999998876654221 123456
Q ss_pred CCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCC---cEEEEecCCCcEEEEecCCCceeeeeeccC
Q 036585 184 DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG---MFVISGSGDGSVHAWSVRSGKEVASWMSFD 260 (304)
Q Consensus 184 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~ 260 (304)
++..+++++.++.|+.||.++++.+..+.... .....++++. ..+++++.||.|+.||.++++.+.+... .
T Consensus 129 ~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~ 202 (369)
T 2hz6_A 129 STSLLYLGRTEYTITMYDTKTRELRWNATYFD-----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-A 202 (369)
T ss_dssp ----EEEEEEEEEEECCCSSSSSCCCEEEEEE-----ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-S
T ss_pred cCCEEEEEecCCEEEEEECCCCCEEEeEeccc-----ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC-C
Confidence 78889999999999999999999877765211 1122334432 4577788899999999999998777653 3
Q ss_pred CCC-ceEEeCCCCcE
Q 036585 261 TEP-PVIKWAPGSLM 274 (304)
Q Consensus 261 ~~i-~~~~~~~~~~~ 274 (304)
.++ ....+++++..
T Consensus 203 ~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 203 SPVVAFYVWQREGLR 217 (369)
T ss_dssp SCEEEEEECTTSSCE
T ss_pred CceEEEEEecCCceE
Confidence 444 33456667643
No 214
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.60 E-value=7e-12 Score=97.85 Aligned_cols=223 Identities=10% Similarity=0.125 Sum_probs=152.0
Q ss_pred cccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee-cccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcc
Q 036585 56 KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY-FKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAE 134 (304)
Q Consensus 56 ~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 134 (304)
+...+.++++.+++...++... ++.|.+||.. ++.... ...+...+.++++.+++.++++...++.|..||.. +
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~---~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHK---ANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETT---TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cCCCccceEECCCCCEEEEecC---CCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 4457899999999987776655 7899999988 543321 22345678999999999988887778899999976 3
Q ss_pred eeeceEEEe----ccceeEecCCCeEEEec--CCCeEEEEe---------cCCCCCceEEEEecCCcEEEEeeCCCeEEE
Q 036585 135 KCQGLLRVQ----GRPAAAYDDQGLVFGYE--KGPLDIFSV---------GGDISDANVVKFSNDGRLMLLTTMEGHIHV 199 (304)
Q Consensus 135 ~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~---------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~ 199 (304)
+. ..+... ....+.+++++.++... .+.+..++. ......+..++++++|+.+++...++.|..
T Consensus 88 ~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 166 (299)
T 2z2n_A 88 II-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGR 166 (299)
T ss_dssp CE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred cE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE
Confidence 22 222211 22245566666555433 233443332 223456788999999987777767789999
Q ss_pred EEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeee-eeccCCCCceEEeCCCCcEEEEe
Q 036585 200 LDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVAS-WMSFDTEPPVIKWAPGSLMFVTG 278 (304)
Q Consensus 200 ~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~s~ 278 (304)
||. +++... +... .....+..+++++++++.++...++.|.+||. +++.... ...+...+.+++++++|+++++.
T Consensus 167 ~~~-~g~~~~-~~~~-~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 167 ITE-SGDITE-FKIP-TPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp ECT-TCCEEE-EECS-STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred EcC-CCcEEE-eeCC-CCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEec
Confidence 998 665543 3221 23456788999999997777777889999998 6654322 23345678899999999877765
Q ss_pred cC-c-eEEeccC
Q 036585 279 SS-E-LSFWIPD 288 (304)
Q Consensus 279 ~~-d-~~iw~~~ 288 (304)
.. + +..|+.+
T Consensus 243 ~~~~~i~~~d~~ 254 (299)
T 2z2n_A 243 WGANKIGRLTSN 254 (299)
T ss_dssp TTTTEEEEEETT
T ss_pred cCCceEEEECCC
Confidence 34 3 7788774
No 215
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.60 E-value=1.3e-12 Score=104.94 Aligned_cols=227 Identities=11% Similarity=0.053 Sum_probs=151.5
Q ss_pred ccCcEEEE-eeCCCeEEEEecCCc----ceeeeec-------ccccceeEEEEccCCCeEEEEecC---CCCCceEEEEc
Q 036585 25 EVGIYLVT-ASDDESIRLYDVTAA----TCLKTIN-------SKKYGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSL 89 (304)
Q Consensus 25 ~~~~~l~~-~~~d~~i~vw~~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~---~~d~~i~vwd~ 89 (304)
+++++|+. +..++.|.|+|+.+. +...++. ........+...|++ .++++..+ +..+.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 55666554 556788999998755 5566663 111246678889999 66655441 11278999999
Q ss_pred cCceeeeecccccc---cEEEEEEcCCCCEEEEcc-------------------cCCeEEEEeCCcceeeceEEEeccce
Q 036585 90 HDNKYSRYFKGHHD---RVVLLSLCSSKDCFISGS-------------------LDRTVLLWDQRAEKCQGLLRVQGRPA 147 (304)
Q Consensus 90 ~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~~~~~ 147 (304)
.+.+.+..+..... .-+.+.|+|+++.+++.. ...+|.+||+.+++....+.....
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~-- 249 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE-- 249 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT--
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC--
Confidence 99998888763222 234578899999988884 368999999998876666553210
Q ss_pred eEecCCCeEEEecCCCeEEEEecCCCCCceEEEE--ecCCcEEEEee------CCCeEEEEEcCCCceeEE--EEeCCC-
Q 036585 148 AAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKF--SNDGRLMLLTT------MEGHIHVLDSFRGTLLST--YNVKPV- 216 (304)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~------~dg~i~~~d~~~~~~~~~--~~~~~~- 216 (304)
......+.| +|+++++++++ .+++|.+|....++.... +.....
T Consensus 250 -------------------------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~ 304 (462)
T 2ece_A 250 -------------------------NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEP 304 (462)
T ss_dssp -------------------------EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEE
T ss_pred -------------------------CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcc
Confidence 012233444 99999888877 466888877655432221 111110
Q ss_pred --C------------CCcceEEEEcCCCcEEEEecC-CCcEEEEecCC---CceeeeeeccC--------------CCCc
Q 036585 217 --S------------RNSTLEASFSPEGMFVISGSG-DGSVHAWSVRS---GKEVASWMSFD--------------TEPP 264 (304)
Q Consensus 217 --~------------~~~i~~~~~s~~~~~l~~~~~-dg~i~v~d~~~---~~~~~~~~~~~--------------~~i~ 264 (304)
. ......+.+||||++|+++.. .+.|.+||+.+ .+.+..+.... +...
T Consensus 305 v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr 384 (462)
T 2ece_A 305 LEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQ 384 (462)
T ss_dssp CCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCC
T ss_pred ccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCC
Confidence 0 245678999999999988864 57899999863 24444443221 1368
Q ss_pred eEEeCCCCcEEEEec
Q 036585 265 VIKWAPGSLMFVTGS 279 (304)
Q Consensus 265 ~~~~~~~~~~l~s~~ 279 (304)
.++++|||++|+++.
T Consensus 385 ~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 385 MLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSSEEEEEC
T ss_pred EEEEcCCCCEEEEEc
Confidence 899999999999888
No 216
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.58 E-value=4.7e-13 Score=106.87 Aligned_cols=258 Identities=9% Similarity=-0.004 Sum_probs=155.2
Q ss_pred ceeeEeecccCcEEEEee--CCCeEEEEecCCcceeeee-------cccccceeEEEEccCCCeEEEEecC--CCCCceE
Q 036585 17 SEEILQSMEVGIYLVTAS--DDESIRLYDVTAATCLKTI-------NSKKYGVDLVCFTSHPTTVIYSSKN--GWDESLR 85 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~--~d~~i~vw~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~~--~~d~~i~ 85 (304)
....+.+.++|+++++.. .++.++||.+.+++.. .+ ..+...+..++++++++.+++-... ..+..|.
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 456688889999988864 2343566665555433 22 2244678999999998755544310 0036899
Q ss_pred EEEccCceeeeeccc------ccccEEEEEEcCCCCEE-EEcc---cCCeEEEEeCCcceeeceEEEeccc---eeEecC
Q 036585 86 LLSLHDNKYSRYFKG------HHDRVVLLSLCSSKDCF-ISGS---LDRTVLLWDQRAEKCQGLLRVQGRP---AAAYDD 152 (304)
Q Consensus 86 vwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l-~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~ 152 (304)
+||+.+++.+..+.. +...+..+++.+++..+ ++-. .++.|.+||+.+++....+..+... ...+..
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~ 176 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVI 176 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEE
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeE
Confidence 999998886655542 22356789999865444 4444 5789999999877654433110000 011111
Q ss_pred CCeEE--EecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCC-eEEEEEcC---CCc-----eeEEEEeCCCCCCcc
Q 036585 153 QGLVF--GYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEG-HIHVLDSF---RGT-----LLSTYNVKPVSRNST 221 (304)
Q Consensus 153 ~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-~i~~~d~~---~~~-----~~~~~~~~~~~~~~i 221 (304)
++..+ ...++.+..|. ..+..++|+|+|+.|+++...+ .+..++.. .+. ....+... ++....
T Consensus 177 ~g~~~~~~~~~g~~~~~~-----~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~p 250 (343)
T 2qe8_A 177 DGVPVQIGQPDGTVIRPH-----LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-SEKPIC 250 (343)
T ss_dssp TTEECBEECTTSCEECCC-----CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSC
T ss_pred CCEEEEeccCCCceecee-----cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCC
Confidence 22211 12222222221 2467899999999888887666 56555532 111 00000100 122345
Q ss_pred eEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeec-cCCCCceEEeCCCCcEEEEecCc
Q 036585 222 LEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMS-FDTEPPVIKWAPGSLMFVTGSSE 281 (304)
Q Consensus 222 ~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~s~~~d 281 (304)
..++++++|+++++...++.|.+||.++++....... +...+.+++|.+++.++++.+..
T Consensus 251 dgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 251 DGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp SCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred ceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 6789999999998888899999999856654322221 24567899999999877776644
No 217
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.56 E-value=5.3e-12 Score=102.95 Aligned_cols=206 Identities=12% Similarity=0.063 Sum_probs=133.9
Q ss_pred ceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCC--eEEEEeCCccee
Q 036585 59 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDR--TVLLWDQRAEKC 136 (304)
Q Consensus 59 ~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~ 136 (304)
....++|+++++.+++... ++.|++||..+++........ .... ++|+|+++.|+++..++ .|.+++...+..
T Consensus 132 ~P~~la~d~~g~lyv~d~~---~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRD---DPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CEEEEEECSTTEEEEEETT---TTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CceEEEEeCCCCEEEEecC---CCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 5779999999986666554 789999999887765544432 2333 89999999888887765 788888765443
Q ss_pred eceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEe--C
Q 036585 137 QGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV--K 214 (304)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~--~ 214 (304)
...+.... ......+..++++|++..|+++..++.|+.||..++... .+.. .
T Consensus 207 ~~~~g~~~-------------------------~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~ 260 (409)
T 3hrp_A 207 PTRIGQLG-------------------------STFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLEL 260 (409)
T ss_dssp EEEEEECC-------------------------TTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEE-EEEECCC
T ss_pred eEEeeecc-------------------------chhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEE-EEecccc
Confidence 22221000 012345678999995545666777889999999877532 2211 1
Q ss_pred CCCCCcc--eEEEEcCC-CcEEEEecCCCcEEEEecCCCceeeeeeccC---------------CCCceEEeCCCCcEEE
Q 036585 215 PVSRNST--LEASFSPE-GMFVISGSGDGSVHAWSVRSGKEVASWMSFD---------------TEPPVIKWAPGSLMFV 276 (304)
Q Consensus 215 ~~~~~~i--~~~~~s~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~---------------~~i~~~~~~~~~~~l~ 276 (304)
......- ..++|+|+ +.++++-..++.|+.|+... + +..+.++. .....++++|+|++++
T Consensus 261 ~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyv 338 (409)
T 3hrp_A 261 SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYI 338 (409)
T ss_dssp CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEE
T ss_pred cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEE
Confidence 1111112 28999995 66666666788999999753 3 33333322 3468899999999666
Q ss_pred Eec-Cc--eEEeccCCcccccccc
Q 036585 277 TGS-SE--LSFWIPDLSKLGAYVG 297 (304)
Q Consensus 277 s~~-~d--~~iw~~~~~~~~~~~~ 297 (304)
+-. .+ |+.|+.....+..+.+
T Consensus 339 ad~~~~~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 339 VDGFKGYCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp EETTTTCEEEEEETTTTEEEEEEE
T ss_pred EeCCCCCEEEEEECCCCEEEEEeC
Confidence 655 44 7777754445554443
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.53 E-value=5.9e-12 Score=98.81 Aligned_cols=212 Identities=12% Similarity=0.054 Sum_probs=139.4
Q ss_pred eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEE
Q 036585 49 CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLL 128 (304)
Q Consensus 49 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i 128 (304)
.+..+...........|+|+++.|+..... ++.|..|+. +++ ...+..+...+..++++++|+++++...++.|..
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~--~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLV--GRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETT--TTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECC--CCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEE
Confidence 344444444567789999999955544432 889999998 444 3445556677899999999997777666688999
Q ss_pred EeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEE----eeC-----------
Q 036585 129 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLL----TTM----------- 193 (304)
Q Consensus 129 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~~----------- 193 (304)
|+.. ++.......... .....++.++++|+|+++++ |..
T Consensus 112 ~~~~-g~~~~~~~~~~~-------------------------~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~ 165 (305)
T 3dr2_A 112 SDAD-GQAHLLVGRYAG-------------------------KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPE 165 (305)
T ss_dssp ECTT-SCEEEEECEETT-------------------------EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCS
T ss_pred ECCC-CCEEEEEeccCC-------------------------CccCCCCCEEECCCCCEEEeCcCCCccccccccccccc
Confidence 9975 432211110000 01134677999999997775 332
Q ss_pred --CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC------CcEEEEecCCCcee--eee-eccCCC
Q 036585 194 --EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD------GSVHAWSVRSGKEV--ASW-MSFDTE 262 (304)
Q Consensus 194 --dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d------g~i~v~d~~~~~~~--~~~-~~~~~~ 262 (304)
.+.|+.||..+++...... ......++|+||++.|+.+... +.|++|++...... ..+ ....+.
T Consensus 166 ~~~~~v~~~d~~~g~~~~~~~-----~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~ 240 (305)
T 3dr2_A 166 LAHHSVYRLPPDGSPLQRMAD-----LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL 240 (305)
T ss_dssp SSCEEEEEECSSSCCCEEEEE-----ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC
T ss_pred cCCCeEEEEcCCCCcEEEEec-----CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC
Confidence 3568888876666543321 2345679999999988777654 68999998754311 111 112445
Q ss_pred CceEEeCCCCcEEEEecCc-eEEeccCCccccccc
Q 036585 263 PPVIKWAPGSLMFVTGSSE-LSFWIPDLSKLGAYV 296 (304)
Q Consensus 263 i~~~~~~~~~~~l~s~~~d-~~iw~~~~~~~~~~~ 296 (304)
+..++++++|++.++. .+ +.+|+.+.+.+..+.
T Consensus 241 pdgi~~d~~G~lwv~~-~~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 241 PDGFCVDRGGWLWSSS-GTGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp CCSEEECTTSCEEECC-SSEEEEECTTSCEEEEEE
T ss_pred CCeEEECCCCCEEEec-CCcEEEECCCCCEEEEEE
Confidence 6789999999966655 45 889988777665554
No 219
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.53 E-value=5.5e-12 Score=99.30 Aligned_cols=196 Identities=11% Similarity=0.119 Sum_probs=130.2
Q ss_pred cceeEEEEccCCCeEEE-------EecCCCCCceEEEEccCceeeeecc----cccccEEEEEEcCC-CCEEEEcccCCe
Q 036585 58 YGVDLVCFTSHPTTVIY-------SSKNGWDESLRLLSLHDNKYSRYFK----GHHDRVVLLSLCSS-KDCFISGSLDRT 125 (304)
Q Consensus 58 ~~v~~~~~~~~~~~l~~-------~~~~~~d~~i~vwd~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~~~~~dg~ 125 (304)
....+++|++++..+++ ... ++.|.+||..+++...... ++...+.+++++++ ++++++.. ...
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~---~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~ 93 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKP---AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLG 93 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEE---CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTE
T ss_pred CCccCceECCCCCEEEEEeccccCCCC---CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCC
Confidence 45678999999977776 454 8899999988776533221 24567899999999 76555444 447
Q ss_pred EEEEeCCcceeece-EEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCC----------
Q 036585 126 VLLWDQRAEKCQGL-LRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTME---------- 194 (304)
Q Consensus 126 i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------- 194 (304)
|.+||.. ++.... ...... .....+..++++++|+++++...+
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~-------------------------~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~ 147 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEG-------------------------RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTS-------------------------CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBT
T ss_pred EEEEeCC-CCEEEEEeccCCC-------------------------ccccCCcCEEECCCCCEEEEecCccccccccccc
Confidence 8899987 543221 110000 012357889999999877766554
Q ss_pred -----CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEc----CCCcEEEEe-cCCCcEEEEecC-CCce-----eeeeec
Q 036585 195 -----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS----PEGMFVISG-SGDGSVHAWSVR-SGKE-----VASWMS 258 (304)
Q Consensus 195 -----g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s----~~~~~l~~~-~~dg~i~v~d~~-~~~~-----~~~~~~ 258 (304)
+.|..||.. ++...... .......++|+ |+++.|+.+ ..++.|.+||+. +++. ...+..
T Consensus 148 ~~~~~~~l~~~~~~-g~~~~~~~----~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 148 MQEKFGSIYCFTTD-GQMIQVDT----AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp TSSSCEEEEEECTT-SCEEEEEE----EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred ccCCCCeEEEECCC-CCEEEecc----CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence 578888865 55443332 23345788999 999766554 567899999986 4432 222333
Q ss_pred cC-CCCceEEeCCCCcEEEEecCc--eEEeccC
Q 036585 259 FD-TEPPVIKWAPGSLMFVTGSSE--LSFWIPD 288 (304)
Q Consensus 259 ~~-~~i~~~~~~~~~~~l~s~~~d--~~iw~~~ 288 (304)
+. ..+..++++++|+++++...+ +.+|+.+
T Consensus 223 ~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 223 THEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCC
Confidence 33 557889999999888776444 8888887
No 220
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.53 E-value=2.5e-12 Score=106.82 Aligned_cols=257 Identities=11% Similarity=0.057 Sum_probs=162.3
Q ss_pred ccCcEEEEeeC-CCeEEEEecCCcceeeeeccc-ccceeEEEE-c-cCCCeEEEEecC---------------CCCCceE
Q 036585 25 EVGIYLVTASD-DESIRLYDVTAATCLKTINSK-KYGVDLVCF-T-SHPTTVIYSSKN---------------GWDESLR 85 (304)
Q Consensus 25 ~~~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~~~~~~---------------~~d~~i~ 85 (304)
+||++++.... ++.|.+.|+.+.++...+.-. ...+..+++ + |+++++++++.. .+++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 47888877665 557999999999987755432 245788888 5 999999988521 1367899
Q ss_pred EEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCC---------------eEEEEeCCcceeeceEEEeccceeEe
Q 036585 86 LLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDR---------------TVLLWDQRAEKCQGLLRVQGRPAAAY 150 (304)
Q Consensus 86 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------------~i~iwd~~~~~~~~~~~~~~~~~~~~ 150 (304)
+.|..+.+...++.-- +....++++|+|+++++.+.+. .|.+.|....... .. .+.... .
T Consensus 179 vID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~--v~-~Gk~~~-i 253 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKA--IA-AGDYQE-L 253 (595)
T ss_dssp EEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHH--HH-HTCSEE-E
T ss_pred EEECCCCeEEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEe--cc-CCCeeE-E
Confidence 9999998877766521 2446678999999998887653 3555554322110 00 000000 0
Q ss_pred cCCCe-EEEecC--CCeEEEEecCCCCCceEEEEecCCcEEEEee-CCCeEEEEEcCCCc------------eeEEEEeC
Q 036585 151 DDQGL-VFGYEK--GPLDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGT------------LLSTYNVK 214 (304)
Q Consensus 151 ~~~~~-~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~------------~~~~~~~~ 214 (304)
++. ++.... +...+..+.- .....++.++|||+++++++ .+.+|.++|+.+.+ ......
T Consensus 254 --~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-- 328 (595)
T 1fwx_A 254 --NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-- 328 (595)
T ss_dssp --TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--
T ss_pred --CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--
Confidence 111 111111 1110111110 12456789999999887765 57899999998653 222222
Q ss_pred CCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCC----------CceeeeeeccCC-----CCceEEeCCCCcEEEEec
Q 036585 215 PVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRS----------GKEVASWMSFDT-----EPPVIKWAPGSLMFVTGS 279 (304)
Q Consensus 215 ~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~----------~~~~~~~~~~~~-----~i~~~~~~~~~~~l~s~~ 279 (304)
.......++|+|+|...++.-.|+.|.+||+.+ .+.+.++..|-. .-.++.++|||++|+++.
T Consensus 329 --vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 329 --LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp --CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred --CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 345567799999994444556899999999976 455666654432 224456789999999876
Q ss_pred C---c-e-----------EEeccCCcccc
Q 036585 280 S---E-L-----------SFWIPDLSKLG 293 (304)
Q Consensus 280 ~---d-~-----------~iw~~~~~~~~ 293 (304)
. | + .+++++..+++
T Consensus 407 k~skdr~~~~gp~~~~~~ql~dis~~~m~ 435 (595)
T 1fwx_A 407 KFSKDRFLNVGPLKPENDQLIDISGDKMV 435 (595)
T ss_dssp SCCTTSSCCCCSSCCEEEEEEECSSSSCE
T ss_pred CCCccccccCCCCCCCcceEEEcCCCcEE
Confidence 4 3 4 88888766654
No 221
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.52 E-value=3.1e-11 Score=94.29 Aligned_cols=193 Identities=12% Similarity=0.078 Sum_probs=124.1
Q ss_pred cceeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecc----cccceeEEEEccCCCeEEEEecCCC------CCceE
Q 036585 16 LSEEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINS----KKYGVDLVCFTSHPTTVIYSSKNGW------DESLR 85 (304)
Q Consensus 16 ~~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~------d~~i~ 85 (304)
.....+.+.++|+++++. ++.|.+||.++++....... ....+..++++|+|+.+++...... ...-.
T Consensus 54 ~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred CceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcE
Confidence 345567888999965543 46799999987765332221 1245788999999986665432100 12234
Q ss_pred EEEccCceeeeecccccccEEEEEEcCCCCEEE-EcccCCeEEEEeC--CcceeeceEEEeccceeEecCCCeEEEecCC
Q 036585 86 LLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFI-SGSLDRTVLLWDQ--RAEKCQGLLRVQGRPAAAYDDQGLVFGYEKG 162 (304)
Q Consensus 86 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (304)
+|.+........+..+......++|+|+++.++ +.+.++.|..||+ .++.......
T Consensus 132 l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~--------------------- 190 (297)
T 3g4e_A 132 LYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRS--------------------- 190 (297)
T ss_dssp EEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEE---------------------
T ss_pred EEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEE---------------------
Confidence 554443222222333445568899999998664 4556789999987 3443211000
Q ss_pred CeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEc-CCCcEEEEec
Q 036585 163 PLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS-PEGMFVISGS 237 (304)
Q Consensus 163 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~ 237 (304)
+..+.........++++++|++.++....+.|..||..+++.+..+. .+...+++++|. |+++.|+.++
T Consensus 191 ---~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~---~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 191 ---VYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVK---LPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp ---EEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEE---CSSSBEEEEEEESGGGCEEEEEE
T ss_pred ---EEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEE---CCCCCceEEEEeCCCCCEEEEEc
Confidence 01111122456779999999877777778899999999899988887 345678999998 8887766554
No 222
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.51 E-value=2e-10 Score=89.59 Aligned_cols=222 Identities=11% Similarity=0.104 Sum_probs=149.4
Q ss_pred ccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee-ecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcce
Q 036585 57 KYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR-YFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEK 135 (304)
Q Consensus 57 ~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 135 (304)
...+.++++.+++...++... ++.|.+||.. ++... .+......+.++++.+++.++++...++.|..||.. ++
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~---~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHK---ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETT---TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CCCcceeeECCCCCEEEEcCC---CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CC
Confidence 457889999999987776655 8899999988 54332 222334678999999999888877778899999987 44
Q ss_pred eeceEEEe----ccceeEecCCCeEEEec--CCCeEEEE---------ecCCCCCceEEEEecCCcEEEEeeCCCeEEEE
Q 036585 136 CQGLLRVQ----GRPAAAYDDQGLVFGYE--KGPLDIFS---------VGGDISDANVVKFSNDGRLMLLTTMEGHIHVL 200 (304)
Q Consensus 136 ~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~---------~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 200 (304)
.. .+... ....+.+++++.++... .+.+..++ +......+..++++++|+++++...++.|..|
T Consensus 94 ~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 94 FT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred eE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 32 22221 12245556666554333 22333332 22234567889999999966666667899999
Q ss_pred EcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeee-eeccCCCCceEEeCCCCcEEEEec
Q 036585 201 DSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVAS-WMSFDTEPPVIKWAPGSLMFVTGS 279 (304)
Q Consensus 201 d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~s~~ 279 (304)
|. +++... +.. +.....+..++++++|++.++....+.|.+||. +++.... +..+...+.+++++++|++.++..
T Consensus 173 ~~-~g~~~~-~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 173 TN-TGKLEE-YPL-PTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp CT-TCCEEE-EEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred CC-CCcEEE-eeC-CCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc
Confidence 98 555443 332 123456789999999987777777778999998 5544332 233456688999999998777664
Q ss_pred Cc--eEEeccC
Q 036585 280 SE--LSFWIPD 288 (304)
Q Consensus 280 ~d--~~iw~~~ 288 (304)
.+ +..++.+
T Consensus 249 ~~~~i~~~~~~ 259 (300)
T 2qc5_A 249 GANQIGRITND 259 (300)
T ss_dssp TTTEEEEECTT
T ss_pred CCCeEEEECCC
Confidence 43 7777764
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.50 E-value=7.7e-12 Score=109.13 Aligned_cols=206 Identities=11% Similarity=0.066 Sum_probs=133.1
Q ss_pred cccceeEEEEccCCCeEEEEecCC--CCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCC---------
Q 036585 56 KKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDR--------- 124 (304)
Q Consensus 56 ~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------- 124 (304)
+...+..++||||+++|+.+...+ ....|++||+.+++.+.... +......++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-KDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-EEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-CCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 445688899999999999765421 13689999999998654311 11113578899 999888887764
Q ss_pred ----eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecC-CCCCceEEEEecCCcEEEEeeC----CC
Q 036585 125 ----TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGG-DISDANVVKFSNDGRLMLLTTM----EG 195 (304)
Q Consensus 125 ----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----dg 195 (304)
.|++|++.+.......- +.... +......+.|+|||++|+.... ..
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v-------------------------~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 259 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLV-------------------------FGAIPAQHHRYVGATVTEDDRFLLISAANSTSGN 259 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEE-------------------------ESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCC
T ss_pred CCCcEEEEEECCCCcccceEE-------------------------EecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCc
Confidence 38888887665432221 11112 2334567899999998866443 35
Q ss_pred eEEEEEcCCCc-eeEEEEeCCCCCCcceEEEEcCCCcEEE-EecCC---CcEEEEecCCCce--eeeeeccCCCCceEEe
Q 036585 196 HIHVLDSFRGT-LLSTYNVKPVSRNSTLEASFSPEGMFVI-SGSGD---GSVHAWSVRSGKE--VASWMSFDTEPPVIKW 268 (304)
Q Consensus 196 ~i~~~d~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~~d---g~i~v~d~~~~~~--~~~~~~~~~~i~~~~~ 268 (304)
.|+++|+.++. ....+. .+....... ++++|..|+ ....+ +.|..+|+.++.. ...+..|...+. .|
T Consensus 260 ~i~~~d~~~~~~~~~~l~---~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~ 333 (693)
T 3iuj_A 260 RLYVKDLSQENAPLLTVQ---GDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TV 333 (693)
T ss_dssp EEEEEETTSTTCCCEEEE---CSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EE
T ss_pred EEEEEECCCCCCceEEEe---CCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EE
Confidence 89999998764 344444 233444444 666665554 44333 5799999987654 345656665554 89
Q ss_pred CCCCcEEEEecCc-----eEEeccCCccccc
Q 036585 269 APGSLMFVTGSSE-----LSFWIPDLSKLGA 294 (304)
Q Consensus 269 ~~~~~~l~s~~~d-----~~iw~~~~~~~~~ 294 (304)
++++++|+....+ +.+|+++......
T Consensus 334 s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~ 364 (693)
T 3iuj_A 334 HSGSGYLFAEYMVDATARVEQFDYEGKRVRE 364 (693)
T ss_dssp EEETTEEEEEEEETTEEEEEEECTTSCEEEE
T ss_pred EEECCEEEEEEEECCeeEEEEEECCCCeeEE
Confidence 9999887766543 6677776554433
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.46 E-value=8.1e-11 Score=88.95 Aligned_cols=211 Identities=13% Similarity=0.058 Sum_probs=140.9
Q ss_pred cceeeeecccc-cceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccccc-ccEEEEEEcCCCCEEEEcccCC
Q 036585 47 ATCLKTINSKK-YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHH-DRVVLLSLCSSKDCFISGSLDR 124 (304)
Q Consensus 47 ~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg 124 (304)
.+.+.++.... .....+.|++++ .|+.++..-.++.|.++|+.+++.+..+.-.. .....+++.. +...++.-.++
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~ 86 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCS
T ss_pred ceEEEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCC
Confidence 34455554222 235789999986 55554321016899999999999887764211 1223455542 33444555788
Q ss_pred eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCC
Q 036585 125 TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 204 (304)
Q Consensus 125 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 204 (304)
.+.++|..+.+.+..+... . -....+++||+.++++..++.|.++|..+
T Consensus 87 ~v~viD~~t~~v~~~i~~g-~------------------------------~~g~glt~Dg~~l~vs~gs~~l~viD~~t 135 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQ-M------------------------------KDGWGLATDGKILYGSDGTSILYEIDPHT 135 (266)
T ss_dssp EEEEEETTTTEEEEEEECC-S------------------------------SSCCEEEECSSSEEEECSSSEEEEECTTT
T ss_pred EEEEEECCCCcEEEEEECC-C------------------------------CCeEEEEECCCEEEEECCCCeEEEEECCC
Confidence 9999999998887776532 0 01234667888888877889999999999
Q ss_pred CceeEEEEeCCC--CCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccC-------------CCCceEEeC
Q 036585 205 GTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFD-------------TEPPVIKWA 269 (304)
Q Consensus 205 ~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-------------~~i~~~~~~ 269 (304)
.+....+..... .-..++.+.|. ++...+....++.|.+.|.++++.+..+.... ...+.|+|+
T Consensus 136 ~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~ 214 (266)
T 2iwa_A 136 FKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWD 214 (266)
T ss_dssp CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEE
T ss_pred CcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEc
Confidence 998888874211 11235678887 77655555567899999999999988875321 345899999
Q ss_pred CCCcEEEEecCc-eEEeccCCcc
Q 036585 270 PGSLMFVTGSSE-LSFWIPDLSK 291 (304)
Q Consensus 270 ~~~~~l~s~~~d-~~iw~~~~~~ 291 (304)
|+++.++.++.. -+++.+++..
T Consensus 215 ~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 215 QENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCCCEEEEECCCCCeEEEEEEec
Confidence 998777766665 5555554433
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.46 E-value=1.8e-11 Score=106.02 Aligned_cols=246 Identities=15% Similarity=0.156 Sum_probs=155.1
Q ss_pred CcEEEEeeC------CCeEEEEecCCcceeeeeccccc--------------------------------ceeEEEEccC
Q 036585 27 GIYLVTASD------DESIRLYDVTAATCLKTINSKKY--------------------------------GVDLVCFTSH 68 (304)
Q Consensus 27 ~~~l~~~~~------d~~i~vw~~~~~~~~~~~~~~~~--------------------------------~v~~~~~~~~ 68 (304)
+..++.++. ++.|+.+|..+++.+-++..... ....++++|+
T Consensus 174 ~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~ 253 (677)
T 1kb0_A 174 KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAE 253 (677)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETT
T ss_pred CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCC
Confidence 445555543 68999999999998866543211 1135788899
Q ss_pred CCeEEEEecCC----------------CCCceEEEEccCceeeeeccc--cc-------ccEEEEEEcCCC---CEEEEc
Q 036585 69 PTTVIYSSKNG----------------WDESLRLLSLHDNKYSRYFKG--HH-------DRVVLLSLCSSK---DCFISG 120 (304)
Q Consensus 69 ~~~l~~~~~~~----------------~d~~i~vwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~ 120 (304)
+..++++..++ +-+.|..+|..+++.+..++. |. .....+....+| ..++.+
T Consensus 254 ~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~ 333 (677)
T 1kb0_A 254 LNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHA 333 (677)
T ss_dssp TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEE
Confidence 98888887521 002599999999988766553 21 122223444467 689999
Q ss_pred ccCCeEEEEeCCcceeeceEEEeccc-eeEecCCCeEEEecCC---CeEEEEecCCC--CCceEEEEecCCcEEEEeeC-
Q 036585 121 SLDRTVLLWDQRAEKCQGLLRVQGRP-AAAYDDQGLVFGYEKG---PLDIFSVGGDI--SDANVVKFSNDGRLMLLTTM- 193 (304)
Q Consensus 121 ~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~- 193 (304)
+.+|.++++|.++++.+..+...... ...++..+........ ........+.. ..-..++++|++.++++...
T Consensus 334 ~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~ 413 (677)
T 1kb0_A 334 PKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQN 413 (677)
T ss_dssp CTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEE
T ss_pred CCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChh
Confidence 99999999999999988766543221 1111111111100000 00000000000 11135778888777776543
Q ss_pred ------------------------------------------CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCc
Q 036585 194 ------------------------------------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 231 (304)
Q Consensus 194 ------------------------------------------dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 231 (304)
.|.|..||+.+++.+.++.. ..+.....+..++.
T Consensus 414 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~----~~~~~~g~~~~~g~ 489 (677)
T 1kb0_A 414 VPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH----VSPWNGGTLTTAGN 489 (677)
T ss_dssp CCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE----SSSCCCCEEEETTT
T ss_pred cceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC----CCCCcCcceEeCCC
Confidence 27899999999999888873 33344455667788
Q ss_pred EEEEecCCCcEEEEecCCCceeeeeeccC-CCCceEEeCCCCcEEE
Q 036585 232 FVISGSGDGSVHAWSVRSGKEVASWMSFD-TEPPVIKWAPGSLMFV 276 (304)
Q Consensus 232 ~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~ 276 (304)
.++.++.||.+++||.++++.+.++.... ..-.-+.|.++|+.++
T Consensus 490 ~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 490 VVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred EEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 89999999999999999999998886433 2334566777886443
No 226
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=6.5e-11 Score=93.73 Aligned_cols=199 Identities=12% Similarity=0.052 Sum_probs=126.9
Q ss_pred eeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeece
Q 036585 60 VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 139 (304)
Q Consensus 60 v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 139 (304)
.....|+|++..++..... ++.|..||..+++.. .+. ....+.++.|.|+++++++. . ..|.+||..+++....
T Consensus 51 ~egp~~~~~~~~l~~~d~~--~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNIL--ERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGG--GTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEE
T ss_pred CcCCeEeCCCCEEEEEECC--CCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEE
Confidence 4567899986655555432 789999999887643 232 34679999999999877654 3 4499999877654322
Q ss_pred EEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeC------CCeEEEEEcCCCceeEEEEe
Q 036585 140 LRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTM------EGHIHVLDSFRGTLLSTYNV 213 (304)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~ 213 (304)
...... .....++.++++|+|+++++... .+.|..++ +++......
T Consensus 125 ~~~~~~-------------------------~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~- 176 (326)
T 2ghs_A 125 AELESD-------------------------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA- 176 (326)
T ss_dssp ECSSTT-------------------------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE-
T ss_pred eeCCCC-------------------------CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC-
Confidence 110000 01124678999999986665432 25666666 454433222
Q ss_pred CCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecC--CC-ce-----eeeeeccCCCCceEEeCCCCcEEEEecC-c-e
Q 036585 214 KPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVR--SG-KE-----VASWMSFDTEPPVIKWAPGSLMFVTGSS-E-L 282 (304)
Q Consensus 214 ~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~--~~-~~-----~~~~~~~~~~i~~~~~~~~~~~l~s~~~-d-~ 282 (304)
.......++|+|+++.|+.+ +.++.|.+||+. ++ +. +..+......+..+++.++|.+.++... . +
T Consensus 177 ---~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v 253 (326)
T 2ghs_A 177 ---DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAV 253 (326)
T ss_dssp ---EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEE
T ss_pred ---CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEE
Confidence 22346789999999876554 557889999986 55 32 1222223345678999999987776643 3 8
Q ss_pred EEeccCCcccccc
Q 036585 283 SFWIPDLSKLGAY 295 (304)
Q Consensus 283 ~iw~~~~~~~~~~ 295 (304)
..|+.+.+.+..+
T Consensus 254 ~~~d~~g~~~~~i 266 (326)
T 2ghs_A 254 DRYDTDGNHIARY 266 (326)
T ss_dssp EEECTTCCEEEEE
T ss_pred EEECCCCCEEEEE
Confidence 8888765544444
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.45 E-value=4.6e-11 Score=103.80 Aligned_cols=232 Identities=11% Similarity=0.154 Sum_probs=145.7
Q ss_pred CCeEEEEecCCcceeeeeccc-------------------------------ccceeEEEEccCCCeEEEEecCCCCC--
Q 036585 36 DESIRLYDVTAATCLKTINSK-------------------------------KYGVDLVCFTSHPTTVIYSSKNGWDE-- 82 (304)
Q Consensus 36 d~~i~vw~~~~~~~~~~~~~~-------------------------------~~~v~~~~~~~~~~~l~~~~~~~~d~-- 82 (304)
+|.|..||..+++.+-.+... ......+++.|+...++++.. ++
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~---~g~~ 258 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVG---NGSL 258 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECC---CEES
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCC---CCCc
Confidence 689999999999987665421 001125788888888888876 54
Q ss_pred -----------------ceEEEEccCceeeeeccc--cc-------ccEEEEEEcCCCC---EEEEcccCCeEEEEeCCc
Q 036585 83 -----------------SLRLLSLHDNKYSRYFKG--HH-------DRVVLLSLCSSKD---CFISGSLDRTVLLWDQRA 133 (304)
Q Consensus 83 -----------------~i~vwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~ 133 (304)
.|..+|..+|+.+..++. |. .++.......+|+ .++.++.+|.++++|.++
T Consensus 259 w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t 338 (689)
T 1yiq_A 259 WDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT 338 (689)
T ss_dssp SCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT
T ss_pred cccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCC
Confidence 499999999998776653 21 2222223333554 788999999999999999
Q ss_pred ceeeceEEEeccc-eeEecC-CCeEEE-------ecCCCeEEEEecCC--CCCceEEEEecCCcEEEEeeC---------
Q 036585 134 EKCQGLLRVQGRP-AAAYDD-QGLVFG-------YEKGPLDIFSVGGD--ISDANVVKFSNDGRLMLLTTM--------- 193 (304)
Q Consensus 134 ~~~~~~~~~~~~~-~~~~~~-~~~~~~-------~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~--------- 193 (304)
++.+......... ....+. .+.-+. +.++.-.+ ...+. ...-..++|+|+..++++...
T Consensus 339 G~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~-~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~ 417 (689)
T 1yiq_A 339 GELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNL-VTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHI 417 (689)
T ss_dssp CCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEE-ESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECC
T ss_pred CCEeccccccccccccccCccCCCcccchhhccccCCCCeeE-eCCCcccccCCCcceECCCCCEEEEeccccceeeeec
Confidence 9887554432211 000000 000000 00000000 00000 011233677777666665421
Q ss_pred ------------------------------------CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec
Q 036585 194 ------------------------------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 237 (304)
Q Consensus 194 ------------------------------------dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 237 (304)
+|.|+.||+.+++.+.++... .+.....++..+..++.++
T Consensus 418 ~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~----~~~~~g~~~tagglvf~gt 493 (689)
T 1yiq_A 418 PEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV----TIFNGGTLSTAGNLVFEGS 493 (689)
T ss_dssp SSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES----SSCCCCEEEETTTEEEEEC
T ss_pred cccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC----CCccCccceECCCEEEEEC
Confidence 378999999999999888742 2333335666788999999
Q ss_pred CCCcEEEEecCCCceeeeeeccCCC-CceEEeCCCCcEE
Q 036585 238 GDGSVHAWSVRSGKEVASWMSFDTE-PPVIKWAPGSLMF 275 (304)
Q Consensus 238 ~dg~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l 275 (304)
.||.++.||.++++.+.++....+. -.-+.|..+|++.
T Consensus 494 ~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 494 ADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQY 532 (689)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred CCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEE
Confidence 9999999999999999888654332 2457777888644
No 228
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.44 E-value=3.5e-10 Score=91.39 Aligned_cols=245 Identities=11% Similarity=0.030 Sum_probs=148.8
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccE
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRV 105 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v 105 (304)
++..++.++.++.|..+|.++++.+............... .+..+++++. ++.|..+|..+++.+..+.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~---~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTS---NGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECT---TSEEEEEETTTCCEEEEEECCC---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcC---CCeEEEEECCCCcEEEEEeCCCCce
Confidence 4667888889999999999999987666544322222222 2457777777 9999999999998776655322111
Q ss_pred -----EEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEecc-------------ceeEecCCCeEEEecCCCeEEE
Q 036585 106 -----VLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR-------------PAAAYDDQGLVFGYEKGPLDIF 167 (304)
Q Consensus 106 -----~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
..... .+..++.++.++.+..+|.++++.......... .......+..++...++.+..+
T Consensus 177 ~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~ 254 (376)
T 3q7m_A 177 SLRGESAPTT--AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTAL 254 (376)
T ss_dssp --CCCCCCEE--ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEE
T ss_pred eecCCCCcEE--ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEE
Confidence 11112 245788888899999999999888766653211 1111222223333334444444
Q ss_pred EecCC-------CCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCC
Q 036585 168 SVGGD-------ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 240 (304)
Q Consensus 168 ~~~~~-------~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 240 (304)
+.... ......+.. ++..+++++.++.+..+|..+++........ .......... .+..|+.++.+|
T Consensus 255 d~~tG~~~w~~~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~--~~~~~~~~~~--~~~~l~v~~~~g 328 (376)
T 3q7m_A 255 DLRSGQIMWKRELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDL--LHRLLTSPVL--YNGNLVVGDSEG 328 (376)
T ss_dssp ETTTCCEEEEECCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTT--TTSCCCCCEE--ETTEEEEECTTS
T ss_pred ECCCCcEEeeccCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeeccc--CCCcccCCEE--ECCEEEEEeCCC
Confidence 33211 122233333 4667888888999999999999887665411 1122222222 346788888999
Q ss_pred cEEEEecCCCceeeeeeccCCCCce-EEeCCCCcEEEEecCc--eEEe
Q 036585 241 SVHAWSVRSGKEVASWMSFDTEPPV-IKWAPGSLMFVTGSSE--LSFW 285 (304)
Q Consensus 241 ~i~v~d~~~~~~~~~~~~~~~~i~~-~~~~~~~~~l~s~~~d--~~iw 285 (304)
.|+++|.++++.+.........+.. ... .++ .|+.++.+ +..|
T Consensus 329 ~l~~~d~~tG~~~~~~~~~~~~~~~~~~~-~~~-~l~v~~~~G~l~~~ 374 (376)
T 3q7m_A 329 YLHWINVEDGRFVAQQKVDSSGFQTEPVA-ADG-KLLIQAKDGTVYSI 374 (376)
T ss_dssp EEEEEETTTCCEEEEEECCTTCBCSCCEE-ETT-EEEEEBTTSCEEEE
T ss_pred eEEEEECCCCcEEEEEecCCCcceeCCEE-ECC-EEEEEeCCCEEEEE
Confidence 9999999999988777653343332 222 233 45555555 4444
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.44 E-value=2.2e-11 Score=105.61 Aligned_cols=243 Identities=12% Similarity=0.090 Sum_probs=159.3
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeeccc-c----cceeE-EEEccCCCeEEEEecCC---CCCceEEEEccCceeee
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTINSK-K----YGVDL-VCFTSHPTTVIYSSKNG---WDESLRLLSLHDNKYSR 96 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~-~----~~v~~-~~~~~~~~~l~~~~~~~---~d~~i~vwd~~~~~~~~ 96 (304)
++..+++++.|+.|..+|..+++.+-++..+ . ..+.. ... .+..+++++... .++.|+.+|..+++.+.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 4678888899999999999999998777654 1 11211 111 245566655311 26899999999998776
Q ss_pred ecccccc--------------------------------cEEEEEEcCCCCEEEEcccCC-------------------e
Q 036585 97 YFKGHHD--------------------------------RVVLLSLCSSKDCFISGSLDR-------------------T 125 (304)
Q Consensus 97 ~~~~~~~--------------------------------~v~~~~~~~~~~~l~~~~~dg-------------------~ 125 (304)
.+..... ....+++.|++..++.+..++ .
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~s 284 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLAS 284 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTE
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEE
Confidence 5542111 112467888888888877664 4
Q ss_pred EEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCC---cEEEEeeCCCeEEEEEc
Q 036585 126 VLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDG---RLMLLTTMEGHIHVLDS 202 (304)
Q Consensus 126 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~dg~i~~~d~ 202 (304)
|..+|.++++....+....... |+... ......+....+| ..+++++.+|.++++|.
T Consensus 285 v~AlD~~TG~~~W~~~~~~~d~-------------------wd~~~-~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~ 344 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQETPGDN-------------------WDYTS-TQPMILADIKIAGKPRKVILHAPKNGFFFVLDR 344 (677)
T ss_dssp EEEECTTTCCEEEEEESSTTCC-------------------SCCCC-CSCCEEEEEEETTEEEEEEEECCTTSEEEEEET
T ss_pred EEEEECCCCCEEEEEecCCCcc-------------------ccccc-CCCcEEEecccCCcEeeEEEEECCCCEEEEEEC
Confidence 8888888888776665321110 00000 1122223444577 68899999999999999
Q ss_pred CCCceeEEEEeCCCC--------CCcc------------------------eEEEEcCCCcEEEEecC------------
Q 036585 203 FRGTLLSTYNVKPVS--------RNST------------------------LEASFSPEGMFVISGSG------------ 238 (304)
Q Consensus 203 ~~~~~~~~~~~~~~~--------~~~i------------------------~~~~~s~~~~~l~~~~~------------ 238 (304)
++|+.+..+...+.. ..++ ..++|+|++.++++...
T Consensus 345 ~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~ 424 (677)
T 1kb0_A 345 TNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKW 424 (677)
T ss_dssp TTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTC
T ss_pred CCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccc
Confidence 999998877632110 0001 14688998888877532
Q ss_pred -------------------------------CCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEe
Q 036585 239 -------------------------------DGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFW 285 (304)
Q Consensus 239 -------------------------------dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw 285 (304)
.|.|..||+.+++.+.++. +..++....+..++.+++.++.| +++|
T Consensus 425 ~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~ 503 (677)
T 1kb0_A 425 EFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAY 503 (677)
T ss_dssp CTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEE
T ss_pred ccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEE
Confidence 2779999999999887775 44455666677777778878777 7777
Q ss_pred ccCCcc
Q 036585 286 IPDLSK 291 (304)
Q Consensus 286 ~~~~~~ 291 (304)
+....+
T Consensus 504 D~~tG~ 509 (677)
T 1kb0_A 504 HAATGE 509 (677)
T ss_dssp ETTTCC
T ss_pred ECCCCc
Confidence 775443
No 230
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=8.8e-11 Score=93.68 Aligned_cols=205 Identities=8% Similarity=-0.014 Sum_probs=131.3
Q ss_pred cceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeec-------ccccccEEEEEEcCCCCEEEEccc-----CCe
Q 036585 58 YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYF-------KGHHDRVVLLSLCSSKDCFISGSL-----DRT 125 (304)
Q Consensus 58 ~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~-----dg~ 125 (304)
..+..++++++++.+++..... ++.++||.+.+++.. .+ ..+...+..+++.++++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~-~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFY-QPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGG-CCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCC-CCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCe
Confidence 5788999999998888764210 343666666555432 22 234567899999999876665433 578
Q ss_pred EEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEE-EEee---CCCeEEEEE
Q 036585 126 VLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLM-LLTT---MEGHIHVLD 201 (304)
Q Consensus 126 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~---~dg~i~~~d 201 (304)
|.+||+.+++....+...... ..+...+..+++++++..+ ++.. .++.|.+||
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~-----------------------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d 151 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPI-----------------------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVD 151 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTT-----------------------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEE
T ss_pred EEEEECCCCeEEEEEECChhh-----------------------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEE
Confidence 999999988766555432110 0122456889999865444 4444 578999999
Q ss_pred cCCCceeEEEEeCCC--------------------------CCCcceEEEEcCCCcEEEEecCCC-cEEEEecC---CCc
Q 036585 202 SFRGTLLSTYNVKPV--------------------------SRNSTLEASFSPEGMFVISGSGDG-SVHAWSVR---SGK 251 (304)
Q Consensus 202 ~~~~~~~~~~~~~~~--------------------------~~~~i~~~~~s~~~~~l~~~~~dg-~i~v~d~~---~~~ 251 (304)
+.+++....+..+.. ....+..++|+|+++.|+.+..++ .++.++.. .+.
T Consensus 152 ~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~ 231 (343)
T 2qe8_A 152 LQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQ 231 (343)
T ss_dssp TTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTT
T ss_pred CCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCC
Confidence 988776544321000 012357899999999888886655 45555532 111
Q ss_pred -----eee--eeeccCCCCceEEeCCCCcEEEEecCc--eEEecc
Q 036585 252 -----EVA--SWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIP 287 (304)
Q Consensus 252 -----~~~--~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~ 287 (304)
... ...++.+....++++++|.++++...+ |.+|+.
T Consensus 232 ~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 232 LTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred CChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 011 112345567889999999888877666 888887
No 231
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.43 E-value=9.7e-11 Score=87.48 Aligned_cols=205 Identities=11% Similarity=0.069 Sum_probs=137.9
Q ss_pred ceeeeecccccc--eeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEE-cccCC
Q 036585 48 TCLKTINSKKYG--VDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFIS-GSLDR 124 (304)
Q Consensus 48 ~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg 124 (304)
+.+.++. |... ...+.|+ ++..+.+.+..+ ...|+++|+.+++.+..+.... ........++++.|+. .-.++
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~~LyestG~~g-~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~ 107 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NGYFYESTGLNG-RSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNG 107 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TTEEEEEEEETT-EEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSS
T ss_pred EEEEEec-CCCCcccceEEEE-CCEEEEECCCCC-CceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCC
Confidence 3455553 4322 4678888 554444544411 2499999999999887775332 3322222233444444 44688
Q ss_pred eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCC
Q 036585 125 TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 204 (304)
Q Consensus 125 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 204 (304)
.+.+||.++.+.+..+.... ....++++++.|+.+..++.|.++|..+
T Consensus 108 ~v~v~D~~t~~~~~ti~~~~--------------------------------eG~glt~dg~~L~~SdGs~~i~~iDp~T 155 (262)
T 3nol_A 108 LGFVWNIRNLRQVRSFNYDG--------------------------------EGWGLTHNDQYLIMSDGTPVLRFLDPES 155 (262)
T ss_dssp EEEEEETTTCCEEEEEECSS--------------------------------CCCCEEECSSCEEECCSSSEEEEECTTT
T ss_pred EEEEEECccCcEEEEEECCC--------------------------------CceEEecCCCEEEEECCCCeEEEEcCCC
Confidence 99999999999888776421 1133446788788877788999999999
Q ss_pred CceeEEEEeCC-C-CCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeecc------------CCCCceEEeCC
Q 036585 205 GTLLSTYNVKP-V-SRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSF------------DTEPPVIKWAP 270 (304)
Q Consensus 205 ~~~~~~~~~~~-~-~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------------~~~i~~~~~~~ 270 (304)
.+...++.... + .-..++.+.|. +|+..+..-.++.|.+.|.++++.+..+... ....+.|+|+|
T Consensus 156 ~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp 234 (262)
T 3nol_A 156 LTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDK 234 (262)
T ss_dssp CSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEET
T ss_pred CeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcC
Confidence 99998887421 0 11334457776 7765555556789999999999988777432 13458999999
Q ss_pred CCcEEEEecCc-eEEeccCC
Q 036585 271 GSLMFVTGSSE-LSFWIPDL 289 (304)
Q Consensus 271 ~~~~l~s~~~d-~~iw~~~~ 289 (304)
+++.|+..+.. =++|.+.+
T Consensus 235 ~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 235 EHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp TTTEEEEEETTCSEEEEEEE
T ss_pred CCCEEEEECCCCCceEEEEE
Confidence 99999888888 66666554
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.42 E-value=2.5e-09 Score=82.14 Aligned_cols=221 Identities=9% Similarity=-0.012 Sum_probs=138.1
Q ss_pred ceeeEeecccCcEE-EEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceee
Q 036585 17 SEEILQSMEVGIYL-VTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYS 95 (304)
Q Consensus 17 ~~~~i~~~~~~~~l-~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~ 95 (304)
+...+.+.++++.| ++-..++.|.+++.........+.........+++.+++..++.+... .+.|.++++......
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~g~~~~ 114 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGTQRR 114 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECC--CCEEEEEEcCCCCEE
Confidence 44567778765544 455567899999987655433333323467899999987777776543 789999998654322
Q ss_pred eecccccccEEEEEEcCCCCEEEEccc---CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCC
Q 036585 96 RYFKGHHDRVVLLSLCSSKDCFISGSL---DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGD 172 (304)
Q Consensus 96 ~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
............++++|++..|+.+.. .+.|..+++.... ...+.. ..
T Consensus 115 ~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~----------------------------~~ 165 (267)
T 1npe_A 115 VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQ----------------------------DN 165 (267)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEEC----------------------------TT
T ss_pred EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEE----------------------------CC
Confidence 222212245688999996665555443 3678777765322 111110 11
Q ss_pred CCCceEEEEecCCcEEEEe-eCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCc
Q 036585 173 ISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGK 251 (304)
Q Consensus 173 ~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~ 251 (304)
......++++|++..|+++ ...+.|.++|........... . ......++.. ++..+++....+.|.++|..+++
T Consensus 166 ~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~---~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 166 LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE---G-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISK 240 (267)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE---C-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTE
T ss_pred CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec---C-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCC
Confidence 2346789999987666555 456799999987544333333 1 2233566654 34344444456889999999998
Q ss_pred eeeeeeccC-CCCceEEeCCCCc
Q 036585 252 EVASWMSFD-TEPPVIKWAPGSL 273 (304)
Q Consensus 252 ~~~~~~~~~-~~i~~~~~~~~~~ 273 (304)
.+..+.... .....+++.|++.
T Consensus 241 ~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 241 EMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEECCSSCCCCCCEEEECSCC
T ss_pred ceEEEccccccccceeeecCccC
Confidence 888875433 3478899988864
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.42 E-value=3e-10 Score=91.36 Aligned_cols=221 Identities=11% Similarity=0.083 Sum_probs=146.5
Q ss_pred eEEEEecCC-----cceeeeecccc--cceeEEEE-----------c--cCCCeEEEEecCCCCCceEEEEccCc----e
Q 036585 38 SIRLYDVTA-----ATCLKTINSKK--YGVDLVCF-----------T--SHPTTVIYSSKNGWDESLRLLSLHDN----K 93 (304)
Q Consensus 38 ~i~vw~~~~-----~~~~~~~~~~~--~~v~~~~~-----------~--~~~~~l~~~~~~~~d~~i~vwd~~~~----~ 93 (304)
.|.+.|++. ++.+..+.-.. ...+.+.| + +++++|++.+.. ++.|.++|+.+. +
T Consensus 44 ~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l~--s~~I~viD~~t~p~~p~ 121 (462)
T 2ece_A 44 FIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGLR--SSRIYIIDTKPNPREPK 121 (462)
T ss_dssp EEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBTT--TCCEEEEECCSCTTSCE
T ss_pred eEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccCC--CCeEEEEECCCCCCCce
Confidence 366677765 56665544211 23344444 6 788888888765 899999999755 4
Q ss_pred eeeecc------c-ccccEEEEEEcCCCCEEEEcccC------CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEec
Q 036585 94 YSRYFK------G-HHDRVVLLSLCSSKDCFISGSLD------RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYE 160 (304)
Q Consensus 94 ~~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (304)
..+++. . -......+...|++ .++++..+ +.+.++|.++.+.+........
T Consensus 122 ~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~--------------- 185 (462)
T 2ece_A 122 IIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRG--------------- 185 (462)
T ss_dssp EEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCT---------------
T ss_pred eeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCC---------------
Confidence 555552 1 11244567788999 77766555 7899999998887766543211
Q ss_pred CCCeEEEEecCCCCCceEEEEecCCcEEEEee-------------------CCCeEEEEEcCCCceeEEEEeCCCCCCcc
Q 036585 161 KGPLDIFSVGGDISDANVVKFSNDGRLMLLTT-------------------MEGHIHVLDSFRGTLLSTYNVKPVSRNST 221 (304)
Q Consensus 161 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------------------~dg~i~~~d~~~~~~~~~~~~~~~~~~~i 221 (304)
....-..+.|+|+++.++++. ...+|.+||+.+++.+.++.... .....
T Consensus 186 -----------~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~-~g~~P 253 (462)
T 2ece_A 186 -----------DQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE-ENRMA 253 (462)
T ss_dssp -----------TCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT-TEEEE
T ss_pred -----------CccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC-CCCcc
Confidence 112234588899999888884 36899999999998888887421 11233
Q ss_pred eEEEE--cCCCcEEEEecC------CCcEEEEecCCCce--eeee--ec----------------cCCCCceEEeCCCCc
Q 036585 222 LEASF--SPEGMFVISGSG------DGSVHAWSVRSGKE--VASW--MS----------------FDTEPPVIKWAPGSL 273 (304)
Q Consensus 222 ~~~~~--s~~~~~l~~~~~------dg~i~v~d~~~~~~--~~~~--~~----------------~~~~i~~~~~~~~~~ 273 (304)
..+.| +|+++++++++. ++.|.+|....++. .+.+ .. -...+..|.++|||+
T Consensus 254 ~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGr 333 (462)
T 2ece_A 254 LELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDK 333 (462)
T ss_dssp EEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSC
T ss_pred ceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCC
Confidence 34555 999999888764 56787776654321 1111 00 024578999999999
Q ss_pred EEEEecCc---eEEeccC
Q 036585 274 MFVTGSSE---LSFWIPD 288 (304)
Q Consensus 274 ~l~s~~~d---~~iw~~~ 288 (304)
+|+++... +.+|+++
T Consensus 334 fLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 334 FLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEEEEETTTTEEEEEECS
T ss_pred EEEEEeCCCCEEEEEEec
Confidence 99888765 8888874
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.41 E-value=1.8e-10 Score=87.01 Aligned_cols=201 Identities=9% Similarity=-0.033 Sum_probs=139.0
Q ss_pred eeEeecccCcEEEEeeC--CCeEEEEecCCcceeeeeccccc-ceeEEEEccCCCeEEEEecCCCCCceEEEEccCceee
Q 036585 19 EILQSMEVGIYLVTASD--DESIRLYDVTAATCLKTINSKKY-GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYS 95 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~--d~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~ 95 (304)
.-+.+.+++.++++.+. ++.|++.|+.+++.+..+..... ....+++ +++.|+.+... ++.+.++|..+.+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~~--~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVWL--KNIGFIYDRRTLSNI 99 (266)
T ss_dssp EEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEETT--CSEEEEEETTTTEEE
T ss_pred ccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEec--CCEEEEEECCCCcEE
Confidence 35778888766665553 57999999999999888753221 2223444 46677777654 899999999999888
Q ss_pred eecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCC
Q 036585 96 RYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISD 175 (304)
Q Consensus 96 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
..+...... ...++++++.++.+..++.|.++|.++.+....+...... .....
T Consensus 100 ~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~------------------------~p~~~ 153 (266)
T 2iwa_A 100 KNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG------------------------HRVIR 153 (266)
T ss_dssp EEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT------------------------EECCC
T ss_pred EEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC------------------------ccccc
Confidence 877532121 2335567776666667889999999998877766543210 01123
Q ss_pred ceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCC----------CCCCcceEEEEcCCCcE-EEEecCCCcEEE
Q 036585 176 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP----------VSRNSTLEASFSPEGMF-VISGSGDGSVHA 244 (304)
Q Consensus 176 v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~----------~~~~~i~~~~~s~~~~~-l~~~~~dg~i~v 244 (304)
++.+.|. +|..++....++.|.+.|..+++.+..+.... ......+.++|+|+++. ++++...+.+.+
T Consensus 154 ~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~ 232 (266)
T 2iwa_A 154 LNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFE 232 (266)
T ss_dssp EEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEE
T ss_pred ceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEE
Confidence 5677887 77655555567899999999999999988421 01135589999999865 555667788998
Q ss_pred EecCCC
Q 036585 245 WSVRSG 250 (304)
Q Consensus 245 ~d~~~~ 250 (304)
.++...
T Consensus 233 i~l~~~ 238 (266)
T 2iwa_A 233 IKLHLV 238 (266)
T ss_dssp EEEEEC
T ss_pred EEEecc
Confidence 888654
No 235
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.41 E-value=1.3e-10 Score=96.64 Aligned_cols=242 Identities=11% Similarity=0.069 Sum_probs=156.9
Q ss_pred EEEeeCCCeEEEEecCCcceeeeec-----------------------------------c----cccceeEEEEcc---
Q 036585 30 LVTASDDESIRLYDVTAATCLKTIN-----------------------------------S----KKYGVDLVCFTS--- 67 (304)
Q Consensus 30 l~~~~~d~~i~vw~~~~~~~~~~~~-----------------------------------~----~~~~v~~~~~~~--- 67 (304)
+.+|+..|.++|+-+.+++.++.+. + ..+.......|.
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 6688899999999988877665431 0 012233456665
Q ss_pred --CCCeEEEEecCCCCCceEEEEccCceeeeeccc-ccccEEEEEE-c-CCCCEEEEcc------------------cCC
Q 036585 68 --HPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKG-HHDRVVLLSL-C-SSKDCFISGS------------------LDR 124 (304)
Q Consensus 68 --~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~------------------~dg 124 (304)
||+++++.... +..|.+.|+.+.+....+.- .......+++ + |+++++++++ .++
T Consensus 98 ~~DG~~lfVnd~~--~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 98 KYDGRFLFMNDKA--NTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEEETT--TTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CcCCCEEEEEcCC--CCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 88888887763 77899999999987774432 2345778887 5 8999988884 356
Q ss_pred eEEEEeCCcceeeceEEEeccc-eeEecCCCeEEEe---cCCC--------------eEEEEecCCCCCceEEEEecCCc
Q 036585 125 TVLLWDQRAEKCQGLLRVQGRP-AAAYDDQGLVFGY---EKGP--------------LDIFSVGGDISDANVVKFSNDGR 186 (304)
Q Consensus 125 ~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~--------------~~~~~~~~~~~~v~~~~~~~~~~ 186 (304)
.+.+.|.++.+....+...+.+ .+..++++..+-. .... +.+++.... ..+.++|+
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~------~~~v~~Gk 249 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI------EKAIAAGD 249 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH------HHHHHHTC
T ss_pred eEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccce------eEeccCCC
Confidence 7999999998888888764433 4555665533211 1111 111111100 01334565
Q ss_pred EEEEeeCCCeEEEEEcCC--Cce-eEEEEeCCCCCCcceEEEEcCCCcEEEEec-CCCcEEEEecCCCc-----------
Q 036585 187 LMLLTTMEGHIHVLDSFR--GTL-LSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVHAWSVRSGK----------- 251 (304)
Q Consensus 187 ~l~~~~~dg~i~~~d~~~--~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~v~d~~~~~----------- 251 (304)
+... +.|.+.|.++ ++. +..+.. .....++.++|||+++++++ .+..|.++|+.+.+
T Consensus 250 ~~~i----~~V~VID~~~~~~~~~~~~Ipv----g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~ 321 (595)
T 1fwx_A 250 YQEL----NGVKVVDGRKEASSLFTRYIPI----ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRS 321 (595)
T ss_dssp SEEE----TTEEEEECSGGGCCSSEEEEEE----ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGG
T ss_pred eeEE----CcEEEEeCcccCCceeEEEEec----CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCccc
Confidence 4443 4599999988 545 455552 23455689999999877765 67889999998653
Q ss_pred -eeeeeeccCCCCceEEeCCCCcEEEEe-cCc--eEEeccCC
Q 036585 252 -EVASWMSFDTEPPVIKWAPGSLMFVTG-SSE--LSFWIPDL 289 (304)
Q Consensus 252 -~~~~~~~~~~~i~~~~~~~~~~~l~s~-~~d--~~iw~~~~ 289 (304)
....+. -......++|+|+| .+++. --+ +..|+++.
T Consensus 322 ~v~~~v~-vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 322 AVVAEPE-LGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp GEEECCB-CCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred ceEEEcC-CCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 233332 33457889999999 55444 334 88898865
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.40 E-value=1.4e-10 Score=91.91 Aligned_cols=199 Identities=12% Similarity=0.105 Sum_probs=107.7
Q ss_pred CCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEecc--ceeEecCCCeEEE
Q 036585 81 DESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDDQGLVFG 158 (304)
Q Consensus 81 d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 158 (304)
++.|..+|.. ++...........+.++...+++..++... ++.+..+|.. ++....+..... ..+..+.++.++.
T Consensus 116 ~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v 192 (330)
T 3hxj_A 116 DGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSN-DNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF 192 (330)
T ss_dssp TSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECT-TSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE
T ss_pred CCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcC-CCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE
Confidence 4555555555 444443333344444445555555555543 2445555554 333333322111 1122222222222
Q ss_pred ecCCCeE--------EEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCC
Q 036585 159 YEKGPLD--------IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEG 230 (304)
Q Consensus 159 ~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 230 (304)
.. +.+. +|........+.++...++|. +.+++.++.+..+| .+++....+.. ....+..+.+.+++
T Consensus 193 ~t-~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~-~~g~~~~~~~~---~~~~~~~~~~~~~g 266 (330)
T 3hxj_A 193 GS-DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAIN-PDGTEKWRFKT---GKRIESSPVIGNTD 266 (330)
T ss_dssp ES-SSEEEECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEEC-TTSCEEEEEEC---SSCCCSCCEECTTS
T ss_pred Ee-CEEEEECCCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEEC-CCCCEeEEeeC---CCCccccceEcCCC
Confidence 11 2222 222223335577788888875 66677788888888 46666666652 23333445566566
Q ss_pred cEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc-eEEeccCCc
Q 036585 231 MFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE-LSFWIPDLS 290 (304)
Q Consensus 231 ~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-~~iw~~~~~ 290 (304)
.|..++.+|.|..+|. +++.+..+......+.++...+++.+.+.+... +.+...+.+
T Consensus 267 -~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 267 -TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYFGTRNGKFYALFNLEH 325 (330)
T ss_dssp -CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEEECTTSCEEEEEC---
T ss_pred -eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEEEcCCCeEEEEecccc
Confidence 4666777888999995 777776666556678888888888766655444 555544433
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.40 E-value=7.5e-11 Score=102.44 Aligned_cols=245 Identities=11% Similarity=0.102 Sum_probs=154.9
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeeccc--ccceeEEEEcc--CCCeEEEEecC---CCCCceEEEEccCceeeeec
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTINSK--KYGVDLVCFTS--HPTTVIYSSKN---GWDESLRLLSLHDNKYSRYF 98 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~--~~~v~~~~~~~--~~~~l~~~~~~---~~d~~i~vwd~~~~~~~~~~ 98 (304)
++..+++++.|+.|..+|.++|+.+-.+... ......+..+| .+..++++... +.++.|+.||..+|+.+..+
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 4668888899999999999999988666542 11111111112 13455555421 12689999999999877655
Q ss_pred ccc-------------------------------cccEEEEEEcCCCCEEEEcccCCe-------------------EEE
Q 036585 99 KGH-------------------------------HDRVVLLSLCSSKDCFISGSLDRT-------------------VLL 128 (304)
Q Consensus 99 ~~~-------------------------------~~~v~~~~~~~~~~~l~~~~~dg~-------------------i~i 128 (304)
... ......+.+.|+..+++.+..++. |..
T Consensus 200 ~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~A 279 (689)
T 1yiq_A 200 YTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVA 279 (689)
T ss_dssp ESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEE
T ss_pred cccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEE
Confidence 310 001125678888888888887764 888
Q ss_pred EeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCc---EEEEeeCCCeEEEEEcCCC
Q 036585 129 WDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGR---LMLLTTMEGHIHVLDSFRG 205 (304)
Q Consensus 129 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~~~d~~~~ 205 (304)
+|.++++....+.........++ ............+|+ .++.++.+|.++++|.++|
T Consensus 280 lD~~TG~~~W~~~~~~~d~wd~~--------------------~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG 339 (689)
T 1yiq_A 280 VNADTGEYVWHYQTTPGDAWDYT--------------------ATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG 339 (689)
T ss_dssp EETTTCCEEEEEESSTTCCSCCC--------------------CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC
T ss_pred EEccCCceeEeeecCCccccccc--------------------CCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC
Confidence 89888887766653211100000 001111122233565 7889999999999999999
Q ss_pred ceeEEEEeCCC-------------------------CC-----------CcceEEEEcCCCcEEEEecC-----------
Q 036585 206 TLLSTYNVKPV-------------------------SR-----------NSTLEASFSPEGMFVISGSG----------- 238 (304)
Q Consensus 206 ~~~~~~~~~~~-------------------------~~-----------~~i~~~~~s~~~~~l~~~~~----------- 238 (304)
+.+......+. .. ..-..++|+|+..++++...
T Consensus 340 ~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~ 419 (689)
T 1yiq_A 340 ELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPE 419 (689)
T ss_dssp CEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSS
T ss_pred CEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccc
Confidence 98865542210 00 00112688998887776521
Q ss_pred ----------------------------------CCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--e
Q 036585 239 ----------------------------------DGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--L 282 (304)
Q Consensus 239 ----------------------------------dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~ 282 (304)
+|.|+.||+.+++.+.++..+. +...-.+...+.+++.++.| +
T Consensus 420 ~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l 498 (689)
T 1yiq_A 420 APKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRV 498 (689)
T ss_dssp CCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEE
T ss_pred cccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcE
Confidence 3779999999999988876543 34444566677788888888 8
Q ss_pred EEeccCCcc
Q 036585 283 SFWIPDLSK 291 (304)
Q Consensus 283 ~iw~~~~~~ 291 (304)
+.|+.+..+
T Consensus 499 ~a~D~~tG~ 507 (689)
T 1yiq_A 499 IAYAADTGE 507 (689)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCc
Confidence 888876544
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.39 E-value=1.6e-10 Score=86.29 Aligned_cols=186 Identities=11% Similarity=0.097 Sum_probs=129.9
Q ss_pred EeecccCcEEEEeeCCC--eEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeec
Q 036585 21 LQSMEVGIYLVTASDDE--SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYF 98 (304)
Q Consensus 21 i~~~~~~~~l~~~~~d~--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~ 98 (304)
+.+. ++.++.+.+.+| .|+++|+++++.+.++.... ........++++.|+..... ++.+.+||..+.+.+.++
T Consensus 48 L~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~--~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 48 FFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWK--NGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp EEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESS--SSEEEEEETTTCCEEEEE
T ss_pred EEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEee--CCEEEEEECccCcEEEEE
Confidence 4555 677777777776 89999999999998876543 33333344456777777653 899999999999988888
Q ss_pred ccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceE
Q 036585 99 KGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANV 178 (304)
Q Consensus 99 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 178 (304)
.... ....+.++++.|+.+..++.|.++|..+.+....+...... .....++.
T Consensus 124 ~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g------------------------~~~~~lNE 176 (262)
T 3nol_A 124 NYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG------------------------EELPELNE 176 (262)
T ss_dssp ECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT------------------------EECCCEEE
T ss_pred ECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC------------------------ccccccce
Confidence 7422 22233356777777666789999999998887776543110 01133456
Q ss_pred EEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCC---------CCCcceEEEEcCCCcEEEEecC
Q 036585 179 VKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPV---------SRNSTLEASFSPEGMFVISGSG 238 (304)
Q Consensus 179 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~---------~~~~i~~~~~s~~~~~l~~~~~ 238 (304)
+.|. +|+.++..-.+..|.+.|.++++.+..+..... ...-.+.++|+|+++.|+..+.
T Consensus 177 Le~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 177 LEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred eEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 7776 777555555688999999999999999985311 1235688999998877766653
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.38 E-value=1.4e-09 Score=87.94 Aligned_cols=251 Identities=11% Similarity=0.054 Sum_probs=149.9
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeecccc---------cceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTINSKK---------YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
.+..+++++.++.|..+|.++++.+-.+.... ..+.. ....++..+++++. ++.|..+|..+++...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~---~g~l~a~d~~tG~~~W 127 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSE---KAQVYALNTSDGTVAW 127 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEET---TSEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcC---CCEEEEEECCCCCEEE
Confidence 46788888889999999999998876655421 12222 22235667888877 8999999999998776
Q ss_pred ecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccc-------eeEecCCCeEEEecCCCeEEE--
Q 036585 97 YFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRP-------AAAYDDQGLVFGYEKGPLDIF-- 167 (304)
Q Consensus 97 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-- 167 (304)
.............. .+..++.++.++.+..+|.++++........... ......+..+++..++.+..+
T Consensus 128 ~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 128 QTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp EEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEET
T ss_pred EEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEEC
Confidence 55433221111122 2447888888999999999999887766543221 112222223333333333333
Q ss_pred -------EecCCCC-------CceEEEEec--CCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCc
Q 036585 168 -------SVGGDIS-------DANVVKFSN--DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGM 231 (304)
Q Consensus 168 -------~~~~~~~-------~v~~~~~~~--~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 231 (304)
....... .+..+...| .+..+++++.++.+..+|.++++.+..... .....+.. ++.
T Consensus 206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~-----~~~~~~~~--~~~ 278 (376)
T 3q7m_A 206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL-----GSVNDFIV--DGN 278 (376)
T ss_dssp TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC-----CCEEEEEE--ETT
T ss_pred CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC-----CCCCCceE--ECC
Confidence 3221110 000010111 245677788899999999999998766542 22333333 456
Q ss_pred EEEEecCCCcEEEEecCCCceeeeeec-cCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc
Q 036585 232 FVISGSGDGSVHAWSVRSGKEVASWMS-FDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 232 ~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
.++.++.++.|..+|.++++.+..... ....+...... +..|+.++.+ +..++....+
T Consensus 279 ~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 279 RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTSEEEEEETTTCC
T ss_pred EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCCeEEEEECCCCc
Confidence 777888899999999999998766542 22223333332 3455555555 6666655443
No 240
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.35 E-value=6.1e-09 Score=82.24 Aligned_cols=232 Identities=9% Similarity=0.034 Sum_probs=142.1
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecc--------------------cccceeEEEEccCCCeEEEEe
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINS--------------------KKYGVDLVCFTSHPTTVIYSS 76 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~~~~ 76 (304)
.+..+.+.++|++++++..++.|..|+..+++.. .+.. ....+..+++.++...|+++.
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 3556778888987888888999999998765432 2210 113578899998444566665
Q ss_pred cCCCCCceEEEEccCceeeeeccc-----ccccEEEEEEcC-CCCEEEEccc-----------------CCeEEEEeCCc
Q 036585 77 KNGWDESLRLLSLHDNKYSRYFKG-----HHDRVVLLSLCS-SKDCFISGSL-----------------DRTVLLWDQRA 133 (304)
Q Consensus 77 ~~~~d~~i~vwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~iwd~~~ 133 (304)
. .+.|..+|..+++. ..+.. .......+++.+ +|++.++-.. ++.|..||..+
T Consensus 99 ~---~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 99 C---YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp T---TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred C---CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 4 44588888776542 22211 112467788999 8876665322 35677777665
Q ss_pred ceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEe-eCCCeEEEEEcCCCc--eeEE
Q 036585 134 EKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGT--LLST 210 (304)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~--~~~~ 210 (304)
++...... .....+.++++|+++.|+++ ...+.|.+|++.... ....
T Consensus 175 ~~~~~~~~------------------------------~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~ 224 (322)
T 2fp8_A 175 KETTLLLK------------------------------ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEV 224 (322)
T ss_dssp TEEEEEEE------------------------------EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEE
T ss_pred CEEEEecc------------------------------CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccce
Confidence 54322111 01234669999999876665 556899999987532 1222
Q ss_pred EEeCCCCCCcceEEEEcCCCcEEEEecC----------CCcEEEEecCCCceeeeeeccC----CCCceEEeCCCCcEEE
Q 036585 211 YNVKPVSRNSTLEASFSPEGMFVISGSG----------DGSVHAWSVRSGKEVASWMSFD----TEPPVIKWAPGSLMFV 276 (304)
Q Consensus 211 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~i~v~d~~~~~~~~~~~~~~----~~i~~~~~~~~~~~l~ 276 (304)
+.. ..+ ...++++++|++.++... .+.|..+|. +++.+..+.... ..++.+++ .++++++
T Consensus 225 ~~~---~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v 298 (322)
T 2fp8_A 225 LVK---IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYI 298 (322)
T ss_dssp EEE---CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEE
T ss_pred EEe---CCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEE
Confidence 221 122 677999999987666543 466888886 577776665432 34677777 3555555
Q ss_pred EecCc--eEEeccCC
Q 036585 277 TGSSE--LSFWIPDL 289 (304)
Q Consensus 277 s~~~d--~~iw~~~~ 289 (304)
+.... +..++++.
T Consensus 299 ~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 299 GTLFHGSVGILVYDK 313 (322)
T ss_dssp ECSSCSEEEEEEC--
T ss_pred eecCCCceEEEeccc
Confidence 54433 66666553
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.34 E-value=8.8e-11 Score=93.04 Aligned_cols=246 Identities=12% Similarity=0.118 Sum_probs=147.2
Q ss_pred CcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEE
Q 036585 27 GIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVV 106 (304)
Q Consensus 27 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~ 106 (304)
+..+..++.++.|..|| .+++.+..+..+...+.++...+++ .+.+++ ++ |..+|. +++....+........
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t----~~-l~~~d~-~g~~~~~~~~~~~~~~ 101 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDG-TIYFGS----DK-VYAINP-DGTEKWRFDTKKAIVS 101 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTT-EECCSS----CE-EEEECC-CGGGGGGSCC-----C
T ss_pred CCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCC-cEEEec----Cc-EEEECC-CCcEEEEEECCCCccc
Confidence 34566777788899999 8888776666555556677776665 455555 34 888886 5655544443332222
Q ss_pred EEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEecc--ceeEecCCCeEE-EecCCCeEEE--------EecCCCCC
Q 036585 107 LLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGR--PAAAYDDQGLVF-GYEKGPLDIF--------SVGGDISD 175 (304)
Q Consensus 107 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~--------~~~~~~~~ 175 (304)
...+. +..++.++.++.+..+|.. ++.......... .....++++.++ +..++.+..+ ........
T Consensus 102 ~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~~ 178 (330)
T 3hxj_A 102 DFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDAI 178 (330)
T ss_dssp CEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSCC
T ss_pred CceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCCc
Confidence 33333 4567778888999999988 665544443222 122334333332 2223333333 33334455
Q ss_pred ceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeee
Q 036585 176 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVAS 255 (304)
Q Consensus 176 v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~ 255 (304)
+.++...+++. +.+++ +.|..+| .+++....+. .....+.++..+++|. |..++.++.|..+| .+++.+..
T Consensus 179 ~~~~~~d~~g~-l~v~t--~~l~~~d-~~g~~~~~~~---~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~-~~g~~~~~ 249 (330)
T 3hxj_A 179 TSAASIGKDGT-IYFGS--DKVYAIN-PDGTEKWNFY---AGYWTVTRPAISEDGT-IYVTSLDGHLYAIN-PDGTEKWR 249 (330)
T ss_dssp CSCCEECTTCC-EEEES--SSEEEEC-TTSCEEEEEC---CSSCCCSCCEECTTSC-EEEEETTTEEEEEC-TTSCEEEE
T ss_pred eeeeEEcCCCE-EEEEe--CEEEEEC-CCCcEEEEEc---cCCcceeceEECCCCe-EEEEcCCCeEEEEC-CCCCEeEE
Confidence 56666666665 77777 7788888 6776665554 3446677778877764 44555688888887 46666666
Q ss_pred eeccCCCCceEEeCCCCcEEEEecCc-eEEeccCCccc
Q 036585 256 WMSFDTEPPVIKWAPGSLMFVTGSSE-LSFWIPDLSKL 292 (304)
Q Consensus 256 ~~~~~~~i~~~~~~~~~~~l~s~~~d-~~iw~~~~~~~ 292 (304)
+......+..+...+++.+.+..... +..++.+.+.+
T Consensus 250 ~~~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~ 287 (330)
T 3hxj_A 250 FKTGKRIESSPVIGNTDTIYFGSYDGHLYAINPDGTEK 287 (330)
T ss_dssp EECSSCCCSCCEECTTSCEEEECTTCEEEEECTTSCEE
T ss_pred eeCCCCccccceEcCCCeEEEecCCCCEEEECCCCcEE
Confidence 66565666777776677555444433 66665433333
No 242
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.34 E-value=4.8e-10 Score=83.73 Aligned_cols=201 Identities=12% Similarity=0.029 Sum_probs=136.1
Q ss_pred ceeeeeccccc--ceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccE--EEEEEcCCCCEEEEcccC
Q 036585 48 TCLKTINSKKY--GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRV--VLLSLCSSKDCFISGSLD 123 (304)
Q Consensus 48 ~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d 123 (304)
+.+.++. |.. -...+.|+ +..|+.++.. ++.|+++|+.+++.+..+ -. ... ..+++.. ++..+..-.+
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~--~~~Ly~stG~--~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~~g-~~Ly~ltw~~ 115 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFH--QGHFFESTGH--QGTLRQLSLESAQPVWME-RL-GNIFAEGLASDG-ERLYQLTWTE 115 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEE--TTEEEEEETT--TTEEEECCSSCSSCSEEE-EC-TTCCEEEEEECS-SCEEEEESSS
T ss_pred EEEEEEc-CCCccccceEEEE--CCEEEEEcCC--CCEEEEEECCCCcEEeEE-CC-CCcceeEEEEeC-CEEEEEEccC
Confidence 3445553 332 23678886 3455554432 788999999999887776 22 233 3355543 3444555578
Q ss_pred CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcC
Q 036585 124 RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF 203 (304)
Q Consensus 124 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~ 203 (304)
+.+.+||.++.+.+..+.... . ...+.++++.|+.+..++.|.++|..
T Consensus 116 ~~v~V~D~~Tl~~~~ti~~~~------------------------------e--GwGLt~Dg~~L~vSdGs~~l~~iDp~ 163 (268)
T 3nok_A 116 GLLFTWSGMPPQRERTTRYSG------------------------------E--GWGLCYWNGKLVRSDGGTMLTFHEPD 163 (268)
T ss_dssp CEEEEEETTTTEEEEEEECSS------------------------------C--CCCEEEETTEEEEECSSSEEEEECTT
T ss_pred CEEEEEECCcCcEEEEEeCCC------------------------------c--eeEEecCCCEEEEECCCCEEEEEcCC
Confidence 999999999999888776321 1 12333578888888789999999999
Q ss_pred CCceeEEEEeCCC--CCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeecc-------------CCCCceEEe
Q 036585 204 RGTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSF-------------DTEPPVIKW 268 (304)
Q Consensus 204 ~~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------------~~~i~~~~~ 268 (304)
+.+.+.++..... .-..++.+.|. +|+..+..-.++.|.+.|.++++.+..+... ....+.|+|
T Consensus 164 T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~ 242 (268)
T 3nok_A 164 GFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAV 242 (268)
T ss_dssp TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEE
T ss_pred CCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEE
Confidence 9999988874221 11244667776 7765555556789999999999988777422 135689999
Q ss_pred CCCCcEEEEecCc-eEEeccCC
Q 036585 269 APGSLMFVTGSSE-LSFWIPDL 289 (304)
Q Consensus 269 ~~~~~~l~s~~~d-~~iw~~~~ 289 (304)
+|+++.|+..+.. =++|.+.+
T Consensus 243 dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 243 EPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp CTTTCCEEEEETTCSEEEEEEE
T ss_pred cCCCCEEEEeCCCCCceEEEEE
Confidence 9998888877777 56665443
No 243
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.34 E-value=3.7e-10 Score=90.06 Aligned_cols=198 Identities=9% Similarity=0.006 Sum_probs=132.4
Q ss_pred EEEccCCCeEEEEecC--CCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcc----------cCCeEEEEe
Q 036585 63 VCFTSHPTTVIYSSKN--GWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGS----------LDRTVLLWD 130 (304)
Q Consensus 63 ~~~~~~~~~l~~~~~~--~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iwd 130 (304)
....|+++.+++.... ..++.|.++|..+++.+..+..-..+ . +.++|++++++++. .++.|.+||
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD 115 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFD 115 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEE
Confidence 4557899998888752 11579999999999988888754445 4 99999999887765 367899999
Q ss_pred CCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeC--CCeEEEEEcCCCcee
Q 036585 131 QRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTM--EGHIHVLDSFRGTLL 208 (304)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~~~d~~~~~~~ 208 (304)
..+.+....+........ ........++|+|||++++++.. ++.|.++|+.+++.+
T Consensus 116 ~~t~~v~~~I~v~~g~r~----------------------~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv 173 (386)
T 3sjl_D 116 PVTLLPTADIELPDAPRF----------------------LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFK 173 (386)
T ss_dssp TTTCCEEEEEEETTCCCC----------------------CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEE
T ss_pred CCCCeEEEEEECCCcccc----------------------ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEE
Confidence 999988877764320000 00124566999999999998864 689999999999999
Q ss_pred EEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCC-Cceeeeeecc----CCCC-ceEEeC-CCCcEEEEecCc
Q 036585 209 STYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRS-GKEVASWMSF----DTEP-PVIKWA-PGSLMFVTGSSE 281 (304)
Q Consensus 209 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~-~~~~~~~~~~----~~~i-~~~~~~-~~~~~l~s~~~d 281 (304)
.++... +. ...+....+.+++.+.||.+.+.++.+ ++.......+ ..++ ....|. ++|++++.....
T Consensus 174 ~tI~v~----g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g 247 (386)
T 3sjl_D 174 RMLDVP----DC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTG 247 (386)
T ss_dssp EEEECC----SE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTS
T ss_pred EEEECC----Cc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCC
Confidence 998732 11 223333445666777788888888865 5542211111 1222 124563 688765544433
Q ss_pred -eEEeccCCc
Q 036585 282 -LSFWIPDLS 290 (304)
Q Consensus 282 -~~iw~~~~~ 290 (304)
+.+.+....
T Consensus 248 ~V~v~d~~~~ 257 (386)
T 3sjl_D 248 KIHQIDLSSG 257 (386)
T ss_dssp EEEEEECTTS
T ss_pred EEEEEECCCC
Confidence 666766544
No 244
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.34 E-value=4.1e-10 Score=84.11 Aligned_cols=180 Identities=9% Similarity=0.028 Sum_probs=126.3
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccE
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRV 105 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v 105 (304)
++.++++.+.+|.|+++|+++++.+..+ ... ........++++.|+..... ++.+.+||..+.+.+.++... ..-
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g~~Ly~ltw~--~~~v~V~D~~Tl~~~~ti~~~-~eG 138 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDGERLYQLTWT--EGLLFTWSGMPPQRERTTRYS-GEG 138 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECSSCEEEEESS--SCEEEEEETTTTEEEEEEECS-SCC
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeCCEEEEEEcc--CCEEEEEECCcCcEEEEEeCC-Cce
Confidence 4667778888899999999999998887 332 33333334456666666543 899999999999998888742 222
Q ss_pred EEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCC
Q 036585 106 VLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDG 185 (304)
Q Consensus 106 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 185 (304)
..++ ++++.|+.+..++.|.++|.++.+....+....... ....++.+.|. +|
T Consensus 139 wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~------------------------~v~~lNeLe~~-dG 191 (268)
T 3nok_A 139 WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ------------------------PVELINELECA-NG 191 (268)
T ss_dssp CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE------------------------ECCCEEEEEEE-TT
T ss_pred eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc------------------------ccccccccEEe-CC
Confidence 3444 567777777778999999999988877766432110 11244667776 77
Q ss_pred cEEEEeeCCCeEEEEEcCCCceeEEEEeC----------CCCCCcceEEEEcCCCcEEEEec
Q 036585 186 RLMLLTTMEGHIHVLDSFRGTLLSTYNVK----------PVSRNSTLEASFSPEGMFVISGS 237 (304)
Q Consensus 186 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~----------~~~~~~i~~~~~s~~~~~l~~~~ 237 (304)
+.++..-.+..|.+.|.++++.+..+... .....-.+.++|+|+++.|+..+
T Consensus 192 ~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 192 VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 65555556889999999999999998842 11224568899999766555444
No 245
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.32 E-value=2.4e-13 Score=109.51 Aligned_cols=181 Identities=13% Similarity=0.105 Sum_probs=98.2
Q ss_pred CCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccce
Q 036585 68 HPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPA 147 (304)
Q Consensus 68 ~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 147 (304)
++..+++++. |+.|+.||..+|+.+..+.. +.+.+..+..++..+++++.|+.|+.||.++++............
T Consensus 8 ~~~~v~~gs~---dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTL---DGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEET---TSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcC---CCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 5778888887 99999999999998877765 455555556677788888899999999998887654432110000
Q ss_pred eEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEc
Q 036585 148 AAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFS 227 (304)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s 227 (304)
. ...+ .+. ++..+++++.++.++.||.++|+.+..+.. +. ...++
T Consensus 83 ~-----------------------~~sp----~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~---~~----~~~~~ 127 (369)
T 2hz6_A 83 V-----------------------QASP----CRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSS---AF----ADSLS 127 (369)
T ss_dssp H-----------------------TTCS----CC------CCCCEEEEEEEEECCC------------------------
T ss_pred c-----------------------ccCc----eEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecC---CC----ccccc
Confidence 0 0011 111 344677888899999999999998877763 21 23567
Q ss_pred CCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCC---cEEEEecCc--eEEeccCCc
Q 036585 228 PEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGS---LMFVTGSSE--LSFWIPDLS 290 (304)
Q Consensus 228 ~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~s~~~d--~~iw~~~~~ 290 (304)
|++..+++++.|+.|+.||.++++.+..+..+. .....+.++. ..+++++.+ +..|+.+..
T Consensus 128 p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG 193 (369)
T 2hz6_A 128 PSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG 193 (369)
T ss_dssp -----EEEEEEEEEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC
T ss_pred ccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCC
Confidence 788899999999999999999998876654322 1223344432 344555555 666665433
No 246
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.30 E-value=4.3e-09 Score=77.99 Aligned_cols=206 Identities=11% Similarity=0.014 Sum_probs=137.0
Q ss_pred ceeeeecccc--cceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccccccc-EEEEEEcCCCCEEEEcccCC
Q 036585 48 TCLKTINSKK--YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDR-VVLLSLCSSKDCFISGSLDR 124 (304)
Q Consensus 48 ~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg 124 (304)
+.+.++ .|. .-...+.|++ ..|+.++.......|+.+|+.+++.+..+.-.... -..+++. +++.....-.++
T Consensus 10 ~v~~~~-phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~ 85 (243)
T 3mbr_X 10 RVVKRY-PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEE-ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSS
T ss_pred EEEEEc-CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCC
Confidence 344555 343 3456888875 34444443101359999999999988776533221 1233443 233444455789
Q ss_pred eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCC
Q 036585 125 TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 204 (304)
Q Consensus 125 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 204 (304)
.+.+||.++.+.+..+.... ....+.++++.|+++..++.|.++|..+
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~--------------------------------~Gwglt~dg~~L~vSdgs~~l~~iDp~t 133 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPG--------------------------------EGWALTSDDSHLYMSDGTAVIRKLDPDT 133 (243)
T ss_dssp EEEEEETTTTEEEEEEECSS--------------------------------CCCEEEECSSCEEEECSSSEEEEECTTT
T ss_pred EEEEEECCcCcEEEEEeCCC--------------------------------CceEEeeCCCEEEEECCCCeEEEEeCCC
Confidence 99999999999888776331 1133446777777777789999999999
Q ss_pred CceeEEEEeCCC--CCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeecc-------------CCCCceEEeC
Q 036585 205 GTLLSTYNVKPV--SRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSF-------------DTEPPVIKWA 269 (304)
Q Consensus 205 ~~~~~~~~~~~~--~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~-------------~~~i~~~~~~ 269 (304)
.+.+.++..... .-..++.+.+. +|+..+..-.+..|.+.|.++++.+..+... ....+.|+++
T Consensus 134 ~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d 212 (243)
T 3mbr_X 134 LQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFD 212 (243)
T ss_dssp CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEE
T ss_pred CeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEc
Confidence 999888874210 11345566665 6665555546778999999999988776422 1245889999
Q ss_pred CCCcEEEEecCc-eEEeccCCc
Q 036585 270 PGSLMFVTGSSE-LSFWIPDLS 290 (304)
Q Consensus 270 ~~~~~l~s~~~d-~~iw~~~~~ 290 (304)
|+++.|+..+.. =++|.+.+.
T Consensus 213 ~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 213 AEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp TTTTEEEEEETTCSEEEEEEEC
T ss_pred CCCCEEEEECCCCCcEEEEEEe
Confidence 998888888887 667666543
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.30 E-value=4.2e-09 Score=78.04 Aligned_cols=184 Identities=11% Similarity=0.105 Sum_probs=125.1
Q ss_pred eecccCcEEEEeeCCC--eEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecc
Q 036585 22 QSMEVGIYLVTASDDE--SIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFK 99 (304)
Q Consensus 22 ~~~~~~~~l~~~~~d~--~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~ 99 (304)
.+.. +.++.+.+.+| .|+++|+++++.+..+.... ........+.++.|+..... ++.+.+||..+.+.+.++.
T Consensus 27 ~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~--~~~v~v~D~~tl~~~~ti~ 102 (243)
T 3mbr_X 27 FYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWR--NHEGFVYDLATLTPRARFR 102 (243)
T ss_dssp EEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESS--SSEEEEEETTTTEEEEEEE
T ss_pred EEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEee--CCEEEEEECCcCcEEEEEe
Confidence 4443 56666666654 89999999999998876543 22223333356666666543 8999999999999888887
Q ss_pred cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEE
Q 036585 100 GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVV 179 (304)
Q Consensus 100 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 179 (304)
.... -..++ +++..|+.+..++.|.++|.++.+....+....... ....++.+
T Consensus 103 ~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~------------------------~~~~lNeL 155 (243)
T 3mbr_X 103 YPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR------------------------PLDNLNEL 155 (243)
T ss_dssp CSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTE------------------------ECCCEEEE
T ss_pred CCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCc------------------------ccccceee
Confidence 4332 23444 466666666668899999999988877765432110 11244566
Q ss_pred EEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCC----------CCCCcceEEEEcCCCcEEEEec
Q 036585 180 KFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKP----------VSRNSTLEASFSPEGMFVISGS 237 (304)
Q Consensus 180 ~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~----------~~~~~i~~~~~s~~~~~l~~~~ 237 (304)
.+. +|+.++..-.+..|.+.|.++++.+..+.... ....-.+.++++|+++.|+..+
T Consensus 156 e~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 156 EWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 665 67655555567899999999999999988431 1223568899999776665554
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.30 E-value=2e-08 Score=77.01 Aligned_cols=225 Identities=9% Similarity=-0.040 Sum_probs=135.7
Q ss_pred CcEEEEeeCCCeEEEEecCCccee-----eeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccc
Q 036585 27 GIYLVTASDDESIRLYDVTAATCL-----KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGH 101 (304)
Q Consensus 27 ~~~l~~~~~d~~i~vw~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~ 101 (304)
|.+|+.+.. +.|+.+++...... ..+......+..++|++++..|+.+... ++.|..+++........+...
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~~ 77 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDIS--EPSIGRASLHGGEPTTIIRQD 77 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETT--TTEEEEEESSSCCCEEEECTT
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECC--CCEEEEEecCCCCcEEEEECC
Confidence 455666654 47888888754321 1222233467899999988777777653 789999998766543333222
Q ss_pred cccEEEEEEcCCCCEEE-EcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEE
Q 036585 102 HDRVVLLSLCSSKDCFI-SGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVK 180 (304)
Q Consensus 102 ~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 180 (304)
......+++.|++..++ +-...+.|.++++...... .+. . ........++
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-~~~-~---------------------------~~~~~P~~i~ 128 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-VLF-D---------------------------TGLVNPRGIV 128 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE-C---------------------------SSCSSEEEEE
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-EEE-E---------------------------CCCCCccEEE
Confidence 34678999999655544 4455678999887643211 111 0 0113457899
Q ss_pred EecCCcEEEEeeC---CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecCCCceeeee
Q 036585 181 FSNDGRLMLLTTM---EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVRSGKEVASW 256 (304)
Q Consensus 181 ~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~ 256 (304)
++|++..|+++.. .+.|..+++.. +....+.. ........++++|++..|+.+ ...+.|.++|+........+
T Consensus 129 vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~--~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~ 205 (267)
T 1npe_A 129 TDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQ--DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL 205 (267)
T ss_dssp EETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEEC--TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE
T ss_pred EeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEE--CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEe
Confidence 9997665655543 46888888753 33333321 123457789999987766555 45678999998754433333
Q ss_pred eccCCCCceEEeCCCCcEEEEecCc---eEEeccCC
Q 036585 257 MSFDTEPPVIKWAPGSLMFVTGSSE---LSFWIPDL 289 (304)
Q Consensus 257 ~~~~~~i~~~~~~~~~~~l~s~~~d---~~iw~~~~ 289 (304)
.. ......++.. +..|+.+... +..++.+.
T Consensus 206 ~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 206 EG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp EC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTT
T ss_pred cC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCC
Confidence 32 2334567654 3444444433 66666654
No 249
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.22 E-value=5.4e-09 Score=83.41 Aligned_cols=203 Identities=8% Similarity=-0.087 Sum_probs=124.7
Q ss_pred ceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcc----------cCCeEEEEeCCcceeeceEEEe---------
Q 036585 83 SLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGS----------LDRTVLLWDQRAEKCQGLLRVQ--------- 143 (304)
Q Consensus 83 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~--------- 143 (304)
.|.++|..+++.+..+..-..+ .+.++|++++++++. .++.|.+||+.+.+....+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 7889999999998888755555 799999999888875 4688999999999999888764
Q ss_pred ccceeEecCCCe-EEEec---CCCeEE--EEecCCCCCceEE------EEecCCc-EEEEeeCC----------------
Q 036585 144 GRPAAAYDDQGL-VFGYE---KGPLDI--FSVGGDISDANVV------KFSNDGR-LMLLTTME---------------- 194 (304)
Q Consensus 144 ~~~~~~~~~~~~-~~~~~---~~~~~~--~~~~~~~~~v~~~------~~~~~~~-~l~~~~~d---------------- 194 (304)
....+.+++++. ++... ...+.+ ++... +..+ .+.|+++ .+++.+.|
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t----v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~ 200 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD----DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAG 200 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE----EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh----ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCC
Confidence 244677888873 22222 233444 33211 1111 0112221 12222233
Q ss_pred ------------------------------CeEEEEEcCCCc--eeEEEEeCC------C-CCCcceEEEEcCCCcEEEE
Q 036585 195 ------------------------------GHIHVLDSFRGT--LLSTYNVKP------V-SRNSTLEASFSPEGMFVIS 235 (304)
Q Consensus 195 ------------------------------g~i~~~d~~~~~--~~~~~~~~~------~-~~~~i~~~~~s~~~~~l~~ 235 (304)
+.+.+.|+.+.. ....+.... . .......++++||++.++.
T Consensus 201 ~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV 280 (368)
T 1mda_H 201 IVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMI 280 (368)
T ss_dssp ECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred eEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEE
Confidence 444444443221 111111000 0 0011112689999998886
Q ss_pred ecC---------CCcEEEEecCCCceeeeeeccCCCCceEEeCCCCc-EEEEec--Cc-eEEeccCCccc
Q 036585 236 GSG---------DGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSL-MFVTGS--SE-LSFWIPDLSKL 292 (304)
Q Consensus 236 ~~~---------dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~s~~--~d-~~iw~~~~~~~ 292 (304)
+.. ++.+.++|+.+.+.+..+.... ....++|+||++ .+++.. .+ +.++|....++
T Consensus 281 ~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 281 LTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD 349 (368)
T ss_dssp EEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred EeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcE
Confidence 533 2356799999999988886544 578999999997 445544 23 99999876554
No 250
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.16 E-value=1.1e-08 Score=88.64 Aligned_cols=245 Identities=14% Similarity=0.110 Sum_probs=149.6
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeeccccc-ceeEEEEcc--CCCeEEEEecC---CCCCceEEEEccCceeeeecc
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTINSKKY-GVDLVCFTS--HPTTVIYSSKN---GWDESLRLLSLHDNKYSRYFK 99 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~l~~~~~~---~~d~~i~vwd~~~~~~~~~~~ 99 (304)
.+..++.++.|+.|..+|..+++.+-++..... ....+..+| .+..++++... +.++.|..+|..+++.+..+.
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 356788888999999999999998876654210 000011111 24456655431 125899999999998776653
Q ss_pred cc---c----------------------------ccEEEEEEcCCCCEEEEcccCCe-------------------EEEE
Q 036585 100 GH---H----------------------------DRVVLLSLCSSKDCFISGSLDRT-------------------VLLW 129 (304)
Q Consensus 100 ~~---~----------------------------~~v~~~~~~~~~~~l~~~~~dg~-------------------i~iw 129 (304)
.. . .....+++.|+...++.++.++. |..+
T Consensus 196 ~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~Al 275 (668)
T 1kv9_A 196 TVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAI 275 (668)
T ss_dssp SSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEE
T ss_pred ccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEE
Confidence 21 0 01123677787788888876663 8888
Q ss_pred eCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCc---EEEEeeCCCeEEEEEcCCCc
Q 036585 130 DQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGR---LMLLTTMEGHIHVLDSFRGT 206 (304)
Q Consensus 130 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i~~~d~~~~~ 206 (304)
|.++++....+.........++ ...+.....+..+|+ .+++++.+|.++++|..+|+
T Consensus 276 D~~tG~~~W~~~~~~~~~wd~~--------------------~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 335 (668)
T 1kv9_A 276 RPDTGKLAWHYQVTPGDSWDFT--------------------ATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGK 335 (668)
T ss_dssp CTTTCCEEEEEESSTTCCSCCC--------------------CCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCceeeEeecCCCcccccc--------------------CCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCC
Confidence 8888887766653211100000 001222223334665 68889999999999999999
Q ss_pred eeEEEEeCCC---------CCCc------------------------ceEEEEcCCCcEEEEe-----------------
Q 036585 207 LLSTYNVKPV---------SRNS------------------------TLEASFSPEGMFVISG----------------- 236 (304)
Q Consensus 207 ~~~~~~~~~~---------~~~~------------------------i~~~~~s~~~~~l~~~----------------- 236 (304)
.+........ ...+ -..++++|+...++..
T Consensus 336 ~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~ 415 (668)
T 1kv9_A 336 LISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVT 415 (668)
T ss_dssp EEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCC
T ss_pred EeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccccc
Confidence 8865542210 0000 0126788876665541
Q ss_pred -------------------cCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc
Q 036585 237 -------------------SGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 237 -------------------~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
..+|.|..||+.+++.+.+...+ .+.....+...+.+++.++.| ++.|+.+..+
T Consensus 416 ~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 416 RKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp CSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcCh
Confidence 13478999999999987776543 334444455567777778777 7777776443
No 251
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.16 E-value=5e-08 Score=84.62 Aligned_cols=259 Identities=10% Similarity=0.089 Sum_probs=145.4
Q ss_pred eEeecc-cCcEEEEeeCCC-----------eEEEEecCCcceee--eecc-cccceeEEEEccCCCeEEEEecCCCCCce
Q 036585 20 ILQSME-VGIYLVTASDDE-----------SIRLYDVTAATCLK--TINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESL 84 (304)
Q Consensus 20 ~i~~~~-~~~~l~~~~~d~-----------~i~vw~~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~d~~i 84 (304)
...+.+ +|++++.|+.+. .+.+||..+++-.. .+.. +.....++++.++++.+++|+.. +..+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~--~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGND--AKKT 267 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSS--TTCE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCC--CCce
Confidence 345555 888999887543 58899988765322 2221 22234457788899999999863 5689
Q ss_pred EEEEccCceeeeeccccccc-EEEEEEcCCCCEEEEcc-cC-----CeEEEEeCCcceeece-------EEEeccc-eeE
Q 036585 85 RLLSLHDNKYSRYFKGHHDR-VVLLSLCSSKDCFISGS-LD-----RTVLLWDQRAEKCQGL-------LRVQGRP-AAA 149 (304)
Q Consensus 85 ~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~-------~~~~~~~-~~~ 149 (304)
.+||..+++....-..+... -.++...++++.++.|+ .+ ..+.+||..+.+.... +...... ...
T Consensus 268 ~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 268 SLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGT
T ss_pred EEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceee
Confidence 99999887643322111111 13455667899999888 34 4689999987654321 0000000 000
Q ss_pred ecCCCeEEEecC---------CCeEEEEecCCC------------------CCceEEEEec-CCcEEEEeeCCC------
Q 036585 150 YDDQGLVFGYEK---------GPLDIFSVGGDI------------------SDANVVKFSN-DGRLMLLTTMEG------ 195 (304)
Q Consensus 150 ~~~~~~~~~~~~---------~~~~~~~~~~~~------------------~~v~~~~~~~-~~~~l~~~~~dg------ 195 (304)
....-.+++..+ ..+..|+..... ..-.++.|.. +++.+++|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 111112222222 223333332211 1123344433 678888887543
Q ss_pred -----eEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC-----------CcEEEEecCCCcee--eeee
Q 036585 196 -----HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD-----------GSVHAWSVRSGKEV--ASWM 257 (304)
Q Consensus 196 -----~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~i~v~d~~~~~~~--~~~~ 257 (304)
.+.+||..+.+..............-.+++..|+++.++.|+.+ ..+.+||..+.+-. ..+.
T Consensus 428 ~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~ 507 (656)
T 1k3i_A 428 TTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS 507 (656)
T ss_dssp CCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS
T ss_pred CCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCC
Confidence 68888887766543320011122223345667899999998754 46899998765422 2122
Q ss_pred ccCCCCceEEeCCCCcEEEEecC
Q 036585 258 SFDTEPPVIKWAPGSLMFVTGSS 280 (304)
Q Consensus 258 ~~~~~i~~~~~~~~~~~l~s~~~ 280 (304)
..........+.|++++++.|+.
T Consensus 508 ~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 508 IVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SCCCTTEEEEECTTSCEEEEECC
T ss_pred CccccccHhhcCCCcEEEecCCC
Confidence 11222234556799999999885
No 252
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.15 E-value=4.6e-07 Score=70.87 Aligned_cols=234 Identities=13% Similarity=0.007 Sum_probs=136.0
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCC-ceEEEEccCceee
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE-SLRLLSLHDNKYS 95 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~-~i~vwd~~~~~~~ 95 (304)
....+.+.++|+++++-..++.|..||... +....+.. ...+..+++.++++.+++.... ++ .|..++..+++..
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~~-~~~p~gia~~~dG~l~vad~~~--~~~~v~~~d~~~g~~~ 108 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDG-NQQIHATV-EGKVSGLAFTSNGDLVATGWNA--DSIPVVSLVKSDGTVE 108 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEEEC-SSEEEEEEECTTSCEEEEEECT--TSCEEEEEECTTSCEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCC-ceEEEEeC-CCCceeEEEcCCCcEEEEeccC--CcceEEEEcCCCCeEE
Confidence 345678888898777777889999999765 33333332 3468899999999865554321 22 4666777776643
Q ss_pred eecc-cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCC
Q 036585 96 RYFK-GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDIS 174 (304)
Q Consensus 96 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (304)
.... ........++..+++..+++-..++.|+.+|...+....... ..... ... ......
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~-~~~~~-~~~-----------------~~~~~~ 169 (306)
T 2p4o_A 109 TLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLE-HPMLA-RSN-----------------SESVFP 169 (306)
T ss_dssp EEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEE-CGGGS-CSS-----------------TTCCSC
T ss_pred EEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEE-CCccc-ccc-----------------ccCCCC
Confidence 2221 111223444445555445554467888888876542111000 00000 000 000112
Q ss_pred CceEEEEecCCcEEEEe-eCCCeEEEEEcCC-Cce--eEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCC
Q 036585 175 DANVVKFSNDGRLMLLT-TMEGHIHVLDSFR-GTL--LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSG 250 (304)
Q Consensus 175 ~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~-~~~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~ 250 (304)
..+.+ +|+++.|+++ ...+.|..|++.. ++. ...+.. ......++++++|+++++....+.|.++|.. +
T Consensus 170 ~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~----~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G 242 (306)
T 2p4o_A 170 AANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE----QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-R 242 (306)
T ss_dssp SEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE----SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-C
T ss_pred cCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec----cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-C
Confidence 23445 7888766655 4567999999864 332 122221 1234568999999887777677889999974 6
Q ss_pred cee--eeeeccCCCCceEEeC---CCCcEEEEecC
Q 036585 251 KEV--ASWMSFDTEPPVIKWA---PGSLMFVTGSS 280 (304)
Q Consensus 251 ~~~--~~~~~~~~~i~~~~~~---~~~~~l~s~~~ 280 (304)
+.. ..+......+++++|. |++..|+.++.
T Consensus 243 ~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 243 STTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp CEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred CEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 552 2333333567899998 88766655543
No 253
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.15 E-value=2.5e-08 Score=86.44 Aligned_cols=236 Identities=11% Similarity=0.116 Sum_probs=141.9
Q ss_pred CCeEEEEecCCcceeeeecccc-------------------------------cceeEEEEccCCCeEEEEecCCCCC--
Q 036585 36 DESIRLYDVTAATCLKTINSKK-------------------------------YGVDLVCFTSHPTTVIYSSKNGWDE-- 82 (304)
Q Consensus 36 d~~i~vw~~~~~~~~~~~~~~~-------------------------------~~v~~~~~~~~~~~l~~~~~~~~d~-- 82 (304)
+|.|..+|.++++.+-++.... .....+++.|+...++.++. ++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~---~g~~ 253 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTG---NGSP 253 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECC---CEES
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCC---CCCc
Confidence 5899999999999886664210 01124688888888888876 44
Q ss_pred -----------------ceEEEEccCceeeeeccc--cc-------ccEEEEEEcCCCC---EEEEcccCCeEEEEeCCc
Q 036585 83 -----------------SLRLLSLHDNKYSRYFKG--HH-------DRVVLLSLCSSKD---CFISGSLDRTVLLWDQRA 133 (304)
Q Consensus 83 -----------------~i~vwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~iwd~~~ 133 (304)
.|.-+|..+++.+..++. |. .+.....+..+++ .++.++.+|.++++|.++
T Consensus 254 w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t 333 (668)
T 1kv9_A 254 WNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN 333 (668)
T ss_dssp SCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT
T ss_pred cccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC
Confidence 489999999998776653 21 2333333334665 688999999999999999
Q ss_pred ceeeceEEEeccc-eeEecC-CCeEEEec----CCCeEEEEecCCC--CCceEEEEecCCcEEEEe--------------
Q 036585 134 EKCQGLLRVQGRP-AAAYDD-QGLVFGYE----KGPLDIFSVGGDI--SDANVVKFSNDGRLMLLT-------------- 191 (304)
Q Consensus 134 ~~~~~~~~~~~~~-~~~~~~-~~~~~~~~----~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~-------------- 191 (304)
++.+........+ ...++. .+..+... .+.- .....+.. ..-..++++|+...+++.
T Consensus 334 G~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~-~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~ 412 (668)
T 1kv9_A 334 GKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEP-IVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKD 412 (668)
T ss_dssp CCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSC-EEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGG
T ss_pred CCEeccccccccccccccccccCCccccccccccCCe-eEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccc
Confidence 9887554432211 001110 00000000 0000 00000000 011235566655544431
Q ss_pred ----------------------eCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCC
Q 036585 192 ----------------------TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRS 249 (304)
Q Consensus 192 ----------------------~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~ 249 (304)
..+|.|..||+.+++.+.++... .+.....+...+.+++.++.|+.++.||.++
T Consensus 413 ~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~----~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~t 488 (668)
T 1kv9_A 413 FVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP----THWNGGTLSTAGNLVFQGTAAGQMHAYSADK 488 (668)
T ss_dssp CCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES----SSCCCCEEEETTTEEEEECTTSEEEEEETTT
T ss_pred cccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC----CCCcCceeEeCCCEEEEECCcccchhhhhhc
Confidence 23488999999999998888742 2233334455677899999999999999999
Q ss_pred CceeeeeeccCCCC-ceEEeCCCCc-EEEEec
Q 036585 250 GKEVASWMSFDTEP-PVIKWAPGSL-MFVTGS 279 (304)
Q Consensus 250 ~~~~~~~~~~~~~i-~~~~~~~~~~-~l~s~~ 279 (304)
++.+..+....... .-+.+..+|+ +++.++
T Consensus 489 G~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 489 GEALWQFEAQSGIVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp CCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred ChhheEecCCCCcccCceEEEECCEEEEEEEe
Confidence 99988886543221 2344445665 454444
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.11 E-value=3.6e-08 Score=83.80 Aligned_cols=248 Identities=11% Similarity=0.084 Sum_probs=142.1
Q ss_pred CcEEEEeeC------CCeEEEEecCCcceeeeecccccc--------------------------------------eeE
Q 036585 27 GIYLVTASD------DESIRLYDVTAATCLKTINSKKYG--------------------------------------VDL 62 (304)
Q Consensus 27 ~~~l~~~~~------d~~i~vw~~~~~~~~~~~~~~~~~--------------------------------------v~~ 62 (304)
+..++.++. ++.|..+|.++++.+-++...... ...
T Consensus 160 ~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~ 239 (571)
T 2ad6_A 160 KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGW 239 (571)
T ss_dssp TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSC
T ss_pred CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeee
Confidence 345555554 789999999999987665432110 013
Q ss_pred EEEccCCCeEEEEecCC-------------CCCceEEEEccCceeeeeccc--c--------cccEEEEEEcCCCC---E
Q 036585 63 VCFTSHPTTVIYSSKNG-------------WDESLRLLSLHDNKYSRYFKG--H--------HDRVVLLSLCSSKD---C 116 (304)
Q Consensus 63 ~~~~~~~~~l~~~~~~~-------------~d~~i~vwd~~~~~~~~~~~~--~--------~~~v~~~~~~~~~~---~ 116 (304)
+++.+....++.+..+. +.+.|..+|..+++.+..++. | ..++. +...++|+ .
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~ 318 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPL 318 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEE
Confidence 56666666777765310 113689999999987766542 1 12222 23334674 5
Q ss_pred EEEcccCCeEEEEeCCcceeeceEEEeccce--eEec-CCCeEEEecC-----CCeEEEEecCCC--CCceEEEEecCCc
Q 036585 117 FISGSLDRTVLLWDQRAEKCQGLLRVQGRPA--AAYD-DQGLVFGYEK-----GPLDIFSVGGDI--SDANVVKFSNDGR 186 (304)
Q Consensus 117 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~-----~~~~~~~~~~~~--~~v~~~~~~~~~~ 186 (304)
++.++.+|.+.++|.++++.+.......... ..++ ..+..+.... .........+.. ..-..++++|+..
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g 398 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR 398 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT
T ss_pred EEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC
Confidence 7788899999999999998877665432110 0000 0000000000 000000000000 0113456666655
Q ss_pred EEEEee-------------------------------------CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCC
Q 036585 187 LMLLTT-------------------------------------MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE 229 (304)
Q Consensus 187 ~l~~~~-------------------------------------~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 229 (304)
++++.. .+|.|..||+.+++.+.++... ..+....+...
T Consensus 399 ~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~----~~~~~~~~~t~ 474 (571)
T 2ad6_A 399 TLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK----FAAWGGTLYTK 474 (571)
T ss_dssp EEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES----SCCCSBCEEET
T ss_pred EEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC----CCccceeEEEC
Confidence 555542 3578999999999998888742 22222222334
Q ss_pred CcEEEEecCCCcEEEEecCCCceeeeeeccCCC-CceEEeCCCCcEEEEec
Q 036585 230 GMFVISGSGDGSVHAWSVRSGKEVASWMSFDTE-PPVIKWAPGSLMFVTGS 279 (304)
Q Consensus 230 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~-i~~~~~~~~~~~l~s~~ 279 (304)
+..++.++.|+.|+.+|.++++.+.++...... -.-+.+..+|++++...
T Consensus 475 gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv~~~ 525 (571)
T 2ad6_A 475 GGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYIGSM 525 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEEEEE
Confidence 567788999999999999999998887643322 22344556776555433
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.08 E-value=9.9e-07 Score=78.38 Aligned_cols=263 Identities=12% Similarity=0.147 Sum_probs=159.2
Q ss_pred ccCcEEEEeeCCCeEEEEecCCcceeeeec-ccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccc---
Q 036585 25 EVGIYLVTASDDESIRLYDVTAATCLKTIN-SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKG--- 100 (304)
Q Consensus 25 ~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~--- 100 (304)
++|++.+ ++.++-|..|+..+++...... .+...|.++...+++.. ..++. ++-+.+||..+++.......
T Consensus 182 ~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~l-wigt~---~~Gl~~~~~~~~~~~~~~~~~~~ 256 (795)
T 4a2l_A 182 QGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRI-WVATE---GAGLFLINPKTKEIKNYLHSPSN 256 (795)
T ss_dssp ETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEE-EEEEB---SSCEEEEETTTTEEEEECCCTTC
T ss_pred CCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCE-EEEEC---CCCeEEEeCCCCeEEEeecCCCC
Confidence 4455444 5554458889987665433211 23456888888777654 44544 55588999887654332211
Q ss_pred ----ccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEE---------eccceeEecCCCeEE-EecCCCeEE
Q 036585 101 ----HHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV---------QGRPAAAYDDQGLVF-GYEKGPLDI 166 (304)
Q Consensus 101 ----~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-~~~~~~~~~ 166 (304)
....|.++...+++.+.+. +.+ -|.+||..++........ .....+..+.++.+. +...+.+..
T Consensus 257 ~~~l~~~~i~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~ 334 (795)
T 4a2l_A 257 PKSISSNYIRSLAMDSQNRLWIG-TFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNY 334 (795)
T ss_dssp TTSCSCSBEEEEEECTTSCEEEE-ESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEE
T ss_pred ccccCCCeEEEEEEcCCCCEEEE-eCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEE
Confidence 2357999999888875554 444 488899876654322111 111234455555444 444455655
Q ss_pred EEecC---------------CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeC-----CCCCCcceEEEE
Q 036585 167 FSVGG---------------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK-----PVSRNSTLEASF 226 (304)
Q Consensus 167 ~~~~~---------------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-----~~~~~~i~~~~~ 226 (304)
++... ....|.++...++|. |.+|+.++-|..||..+++........ ......|.+++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 413 (795)
T 4a2l_A 335 YHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYV 413 (795)
T ss_dssp ECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEE
T ss_pred eCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEE
Confidence 54321 124578888888887 666888878999998776543321110 012467889999
Q ss_pred cCCCcEEEEecCCCcEEEEecCCCceeeeee----ccCCCCceEEeCCCCcEEEEecCceEEeccCCcccccc
Q 036585 227 SPEGMFVISGSGDGSVHAWSVRSGKEVASWM----SFDTEPPVIKWAPGSLMFVTGSSELSFWIPDLSKLGAY 295 (304)
Q Consensus 227 s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~s~~~d~~iw~~~~~~~~~~ 295 (304)
.++++.|..|+.++-|..||.++++...-.. .....|.++...++|.+.+.....+.+|+.+..++..+
T Consensus 414 d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~ 486 (795)
T 4a2l_A 414 DEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTTI 486 (795)
T ss_dssp ETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEEEC
T ss_pred cCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEEEc
Confidence 8888856667666679999988765432211 13456889998888887666554488888766555443
No 256
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.06 E-value=5.5e-07 Score=67.70 Aligned_cols=211 Identities=8% Similarity=0.108 Sum_probs=133.1
Q ss_pred eecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccc-ccccEEEEEEcCCCCEEEEcccCCeEEEEe
Q 036585 52 TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKG-HHDRVVLLSLCSSKDCFISGSLDRTVLLWD 130 (304)
Q Consensus 52 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 130 (304)
.+.+-...+..++++|++..|++.... ++.|...|.. ++..+.+.- -......+++.+++.++++.-.++.+.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~--~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINK--PAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEET--TEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECC--CCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 344555579999999998888876653 8889999987 776666531 124678889998888777766778899998
Q ss_pred CCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcC---CCce
Q 036585 131 QRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF---RGTL 207 (304)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~---~~~~ 207 (304)
+................. ..........++|+|.++.|+++.......+|.++ ....
T Consensus 98 v~~~~~i~~~~~~~~~~~--------------------~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~ 157 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQ--------------------ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNE 157 (255)
T ss_dssp ECTTCCEEEEEEEECCCS--------------------SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSC
T ss_pred cCCCCeeeeeeeeccccc--------------------cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCc
Confidence 766543222111100000 00234557899999999777777766555555543 1111
Q ss_pred eEEEEe----CCCCCCcceEEEEcCC-CcEEEEecCCCcEEEEecCCCceeeeeeccC---------CCCceEEeCCCCc
Q 036585 208 LSTYNV----KPVSRNSTLEASFSPE-GMFVISGSGDGSVHAWSVRSGKEVASWMSFD---------TEPPVIKWAPGSL 273 (304)
Q Consensus 208 ~~~~~~----~~~~~~~i~~~~~s~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~---------~~i~~~~~~~~~~ 273 (304)
+..... .......+.+++++|. +++++.....+.+.++|.+ ++.+..+.-.. ...-.|+|.++|+
T Consensus 158 l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ 236 (255)
T 3qqz_A 158 LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN 236 (255)
T ss_dssp CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC
T ss_pred eeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC
Confidence 222211 0112345788999995 4556666677889999964 56655543221 2457899999998
Q ss_pred EEEEecCceEEecc
Q 036585 274 MFVTGSSELSFWIP 287 (304)
Q Consensus 274 ~l~s~~~d~~iw~~ 287 (304)
+.++ ++.-.+|.+
T Consensus 237 lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 237 IYIV-SEPNRFYRF 249 (255)
T ss_dssp EEEE-ETTTEEEEE
T ss_pred EEEE-cCCceEEEE
Confidence 6555 444455554
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.06 E-value=9e-08 Score=75.51 Aligned_cols=202 Identities=11% Similarity=0.030 Sum_probs=123.5
Q ss_pred ceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecc--------------------cccccEEEEEEcC-CCCEE
Q 036585 59 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFK--------------------GHHDRVVLLSLCS-SKDCF 117 (304)
Q Consensus 59 ~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~--------------------~~~~~v~~~~~~~-~~~~l 117 (304)
....+++.++++.++++.. ++.|..|+..+++.. .+. .....+..+++.+ +++ |
T Consensus 20 ~p~~i~~d~~g~~l~v~~~---~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l 94 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQ---DGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-L 94 (322)
T ss_dssp CCCCEECCTTCSSEEEECT---TSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-E
T ss_pred CceEEEEcCCCCEEEEEcC---CCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc-E
Confidence 4567899999887888876 889999988765432 111 0123578899997 564 5
Q ss_pred EEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEec-CCcEEEEeeC---
Q 036585 118 ISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSN-DGRLMLLTTM--- 193 (304)
Q Consensus 118 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~--- 193 (304)
+.+...+.+..+|..++........... ......+.+++.+ +|++.++-..
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~~~~~-------------------------~~~~~p~~i~~d~~~G~l~v~d~~~~~ 149 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLATSVDG-------------------------VPFKWLYAVTVDQRTGIVYFTDVSTLY 149 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEESEETT-------------------------EECSCEEEEEECTTTCCEEEEESCSSC
T ss_pred EEEECCCCEEEEeCCCCEEEEecccCCC-------------------------CcccccceEEEecCCCEEEEECCcccc
Confidence 5554445588888765432211100000 0112356788888 8876555322
Q ss_pred --------------CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecCCCc--eeeee
Q 036585 194 --------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVRSGK--EVASW 256 (304)
Q Consensus 194 --------------dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~~--~~~~~ 256 (304)
+|.|..||..+++...... .......++++|++++|+.+ ..++.|.+|++.... ....+
T Consensus 150 ~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~----~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~ 225 (322)
T 2fp8_A 150 DDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK----ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVL 225 (322)
T ss_dssp CTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE----EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEE
T ss_pred cccccceehcccCCCceEEEEeCCCCEEEEecc----CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceE
Confidence 3679999987776443322 12344579999999876655 556889999987421 11222
Q ss_pred eccCCCCceEEeCCCCcEEEEecC----------c--eEEeccCCcccccc
Q 036585 257 MSFDTEPPVIKWAPGSLMFVTGSS----------E--LSFWIPDLSKLGAY 295 (304)
Q Consensus 257 ~~~~~~i~~~~~~~~~~~l~s~~~----------d--~~iw~~~~~~~~~~ 295 (304)
....+ ...+++.++|++.++... . +..++.+.+.+..+
T Consensus 226 ~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~ 275 (322)
T 2fp8_A 226 VKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVI 275 (322)
T ss_dssp EECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEE
T ss_pred EeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEE
Confidence 21223 788999999987766544 2 55666655544443
No 258
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.04 E-value=2.8e-07 Score=78.34 Aligned_cols=257 Identities=13% Similarity=0.113 Sum_probs=149.9
Q ss_pred CcEEEEeeC-CCeEEEEec-CCcceeeeeccccc-ce----------eEEEEccCCCeEEEEecCCCCCceEEEEccCce
Q 036585 27 GIYLVTASD-DESIRLYDV-TAATCLKTINSKKY-GV----------DLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 93 (304)
Q Consensus 27 ~~~l~~~~~-d~~i~vw~~-~~~~~~~~~~~~~~-~v----------~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~ 93 (304)
+..++.++. ++.|.-+|. .+++.+-++..... .+ ..++. .+..+++++. |+.+..+|..+++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~---dg~l~alD~~tG~ 136 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQA---NGHLLALDAKTGK 136 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECT---TSEEEEEETTTCC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeC---CCEEEEEECCCCC
Confidence 556666777 889999999 89998766543221 00 11222 4667788877 9999999999998
Q ss_pred eeeeccccc--c--cEEE-EEEcCCCCEEEEccc------CCeEEEEeCCcceeeceEEEeccc----------------
Q 036585 94 YSRYFKGHH--D--RVVL-LSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLRVQGRP---------------- 146 (304)
Q Consensus 94 ~~~~~~~~~--~--~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~---------------- 146 (304)
.+....... . .+.+ .... ++ .++.++. ++.|..+|.++++.+..+......
T Consensus 137 ~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 214 (571)
T 2ad6_A 137 INWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHY 214 (571)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred EEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccc
Confidence 776544211 0 1111 1111 34 4555544 799999999999988776543211
Q ss_pred ------------------------eeEecCC-CeEE-------------------------Eec-CCCeEEEEecCCC--
Q 036585 147 ------------------------AAAYDDQ-GLVF-------------------------GYE-KGPLDIFSVGGDI-- 173 (304)
Q Consensus 147 ------------------------~~~~~~~-~~~~-------------------------~~~-~~~~~~~~~~~~~-- 173 (304)
..++++. +.++ ..+ .....+|..+...
T Consensus 215 G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d 294 (571)
T 2ad6_A 215 GQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHD 294 (571)
T ss_dssp CCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCc
Confidence 1222221 2221 111 1222334443211
Q ss_pred -------CCceEEEEecCCc---EEEEeeCCCeEEEEEcCCCceeEEEEeCCCC----------CCcc------------
Q 036585 174 -------SDANVVKFSNDGR---LMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS----------RNST------------ 221 (304)
Q Consensus 174 -------~~v~~~~~~~~~~---~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~----------~~~i------------ 221 (304)
....-+...++|+ .++.++.+|.++++|..+++.+..+...... ..++
T Consensus 295 ~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~ 374 (571)
T 2ad6_A 295 EWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHK 374 (571)
T ss_dssp SSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCC
T ss_pred ccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCC
Confidence 0111122234674 5777889999999999999998877642200 0111
Q ss_pred --------------eEEEEcCCCcEEEEec-------------------------------------CCCcEEEEecCCC
Q 036585 222 --------------LEASFSPEGMFVISGS-------------------------------------GDGSVHAWSVRSG 250 (304)
Q Consensus 222 --------------~~~~~s~~~~~l~~~~-------------------------------------~dg~i~v~d~~~~ 250 (304)
..++++|+..+++... .+|.|..||+.++
T Consensus 375 ~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG 454 (571)
T 2ad6_A 375 GTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTG 454 (571)
T ss_dssp EEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTC
T ss_pred ceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCC
Confidence 2357888877776643 3578999999999
Q ss_pred ceeeeeeccCCCCceEEeCCCCcEEEEecCc--eEEeccCCcc
Q 036585 251 KEVASWMSFDTEPPVIKWAPGSLMFVTGSSE--LSFWIPDLSK 291 (304)
Q Consensus 251 ~~~~~~~~~~~~i~~~~~~~~~~~l~s~~~d--~~iw~~~~~~ 291 (304)
+.+.++... .++....+...+..++.++.| +..++....+
T Consensus 455 ~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 455 KAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGK 496 (571)
T ss_dssp CEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCC
Confidence 987776533 333333333344556667766 6666654433
No 259
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.04 E-value=3.6e-07 Score=77.79 Aligned_cols=112 Identities=8% Similarity=0.022 Sum_probs=73.2
Q ss_pred CcEEEEeeC-CCeEEEEec-CCcceeeeecccccc-----------eeEEEEccCCCe----EEEEecCCCCCceEEEEc
Q 036585 27 GIYLVTASD-DESIRLYDV-TAATCLKTINSKKYG-----------VDLVCFTSHPTT----VIYSSKNGWDESLRLLSL 89 (304)
Q Consensus 27 ~~~l~~~~~-d~~i~vw~~-~~~~~~~~~~~~~~~-----------v~~~~~~~~~~~----l~~~~~~~~d~~i~vwd~ 89 (304)
+..+++++. ++.|.-+|. .+++.+-++...... ...++++|.+.. +++++. |+.|.-+|.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~---dg~l~AlDa 138 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL---DGNVAALNA 138 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---TSEEEEEET
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---CCEEEEEEC
Confidence 566777777 889999999 899988666532210 123455444445 888877 999999999
Q ss_pred cCceeeeeccccc----ccEEE-EEEcCCCCEEEEcc------cCCeEEEEeCCcceeeceEEEe
Q 036585 90 HDNKYSRYFKGHH----DRVVL-LSLCSSKDCFISGS------LDRTVLLWDQRAEKCQGLLRVQ 143 (304)
Q Consensus 90 ~~~~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~ 143 (304)
.+|+.+....... ..+.+ ..+. ++ .++.++ .++.|+.+|.++++.+..+...
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 139 ETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp TTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred CCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 9998776543211 01111 1111 34 455554 3799999999999988776643
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.03 E-value=1.2e-07 Score=80.75 Aligned_cols=245 Identities=15% Similarity=0.162 Sum_probs=140.3
Q ss_pred EEEEee------CCCeEEEEecCCcceeeeecccccc-----------------------------------------ee
Q 036585 29 YLVTAS------DDESIRLYDVTAATCLKTINSKKYG-----------------------------------------VD 61 (304)
Q Consensus 29 ~l~~~~------~d~~i~vw~~~~~~~~~~~~~~~~~-----------------------------------------v~ 61 (304)
.+++++ .++.|..+|..+++.+-........ -.
T Consensus 170 ~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~ 249 (582)
T 1flg_A 170 LLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQ 249 (582)
T ss_dssp EEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCS
T ss_pred EEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccC
Confidence 566654 3789999999999877554321000 01
Q ss_pred EEEEccCCCeEEEEecC---------------------CCCCceEEEEccCceeeeeccc--cc--------ccEEEEEE
Q 036585 62 LVCFTSHPTTVIYSSKN---------------------GWDESLRLLSLHDNKYSRYFKG--HH--------DRVVLLSL 110 (304)
Q Consensus 62 ~~~~~~~~~~l~~~~~~---------------------~~d~~i~vwd~~~~~~~~~~~~--~~--------~~v~~~~~ 110 (304)
.+++.|....++++..+ .+.+.|.-+|..+++.+..++. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 34566677777776631 0126899999999998776642 21 2222 222
Q ss_pred c-CCCC---EEEEcccCCeEEEEeCCcceeeceEEEeccc--eeEecC-CCeEEEecC-----------CCeEEEEecCC
Q 036585 111 C-SSKD---CFISGSLDRTVLLWDQRAEKCQGLLRVQGRP--AAAYDD-QGLVFGYEK-----------GPLDIFSVGGD 172 (304)
Q Consensus 111 ~-~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~-----------~~~~~~~~~~~ 172 (304)
. .+|+ .++.++.+|.++++|.++++.+..+...... ...++. .+..+.... ...........
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~ 408 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPF 408 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCT
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCC
Confidence 2 4664 7888999999999999999988766543211 000110 011000000 00000000000
Q ss_pred C--CCceEEEEecCCcEEEEee---------------------------------CCCeEEEEEcCCCceeEEEEeCCCC
Q 036585 173 I--SDANVVKFSNDGRLMLLTT---------------------------------MEGHIHVLDSFRGTLLSTYNVKPVS 217 (304)
Q Consensus 173 ~--~~v~~~~~~~~~~~l~~~~---------------------------------~dg~i~~~d~~~~~~~~~~~~~~~~ 217 (304)
. ..-..++++|+...+++.. .+|.|.-||+.+++.+.+.....
T Consensus 409 ~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-- 486 (582)
T 1flg_A 409 LGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-- 486 (582)
T ss_dssp TCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS--
T ss_pred ccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC--
Confidence 0 0012344555444333321 36889999999999988877421
Q ss_pred CCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCC-ceEEeCCCCc-EEEEe
Q 036585 218 RNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEP-PVIKWAPGSL-MFVTG 278 (304)
Q Consensus 218 ~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~-~l~s~ 278 (304)
+...-.....+.+++.++.|+.++.||.++++.+.+++...+.. .-+.|..+|+ |+++.
T Consensus 487 --~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 487 --PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp --CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred --CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 22111122246678889999999999999999998886544322 2366767876 44433
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.00 E-value=1.3e-06 Score=70.55 Aligned_cols=206 Identities=10% Similarity=-0.048 Sum_probs=123.1
Q ss_pred cEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEE
Q 036585 28 IYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVL 107 (304)
Q Consensus 28 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~ 107 (304)
.+|+.+.. ..|+..++........+.. ...+..++|.+....|+.+... .+.|..+++........+.........
T Consensus 88 ~~l~~~~~-~~I~~i~~~~~~~~~~~~~-~~~~~gl~~d~~~~~ly~~D~~--~~~I~r~~~~g~~~~~~~~~~~~~p~g 163 (386)
T 3v65_B 88 PVLLFANR-IDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVT--LDRILRANLNGSNVEEVVSTGLESPGG 163 (386)
T ss_dssp CEEEEECB-SCEEEECTTSCCCEEEECS-CSCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCCEEEEECSSCSCCCC
T ss_pred ceeEeecC-ccceeeccCCCcEEEEecC-CCccEEEEEecCCCeEEEEeCC--CCcEEEEecCCCCcEEEEeCCCCCccE
Confidence 34444433 4688888876554443433 3457899999877777766543 788999998876543333322234466
Q ss_pred EEEcCCCC-EEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCc
Q 036585 108 LSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGR 186 (304)
Q Consensus 108 ~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 186 (304)
+++.+.+. ++++-...+.|.+.++........+ .........++++|.+.
T Consensus 164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~-----------------------------~~~l~~P~giavdp~~g 214 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-----------------------------WQSLEKPRAIALHPMEG 214 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE-----------------------------CSSCSCEEEEEEETTTT
T ss_pred EEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee-----------------------------cCCCCCCcEEEEEcCCC
Confidence 78887444 4445455677888776543221111 01223567899998766
Q ss_pred EEEEee-CC-CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecCCCceeeeeeccCCCC
Q 036585 187 LMLLTT-ME-GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVRSGKEVASWMSFDTEP 263 (304)
Q Consensus 187 ~l~~~~-~d-g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~i 263 (304)
.|+.+. .. +.|..+++.... ...+.. ..-.....++|+|++..|+.+ ...+.|..+|+........+.......
T Consensus 215 ~ly~td~~~~~~I~r~~~dG~~-~~~~~~--~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P 291 (386)
T 3v65_B 215 TIYWTDWGNTPRIEASSMDGSG-RRIIAD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHP 291 (386)
T ss_dssp EEEEEECSSSCEEEEEETTSCS-CEEEEC--SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSE
T ss_pred eEEEeccCCCCEEEEEeCCCCC-cEEEEE--CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCc
Confidence 665554 33 689999875433 333321 233456789999877666655 456789999986433322232233456
Q ss_pred ceEEeC
Q 036585 264 PVIKWA 269 (304)
Q Consensus 264 ~~~~~~ 269 (304)
..|++.
T Consensus 292 ~giav~ 297 (386)
T 3v65_B 292 FAITVF 297 (386)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 777873
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.00 E-value=2e-07 Score=79.36 Aligned_cols=244 Identities=9% Similarity=0.053 Sum_probs=137.0
Q ss_pred cEEEEee------CCCeEEEEecCCcceeeeecccccc-------------------------------------e-eEE
Q 036585 28 IYLVTAS------DDESIRLYDVTAATCLKTINSKKYG-------------------------------------V-DLV 63 (304)
Q Consensus 28 ~~l~~~~------~d~~i~vw~~~~~~~~~~~~~~~~~-------------------------------------v-~~~ 63 (304)
..+++++ .++.|+.+|.++++++-++...... + ..+
T Consensus 167 g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~ 246 (599)
T 1w6s_A 167 DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWY 246 (599)
T ss_dssp TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccce
Confidence 3455554 3789999999999987665432110 0 134
Q ss_pred EEccCCCeEEEEecCC-------------CCCceEEEEccCceeeeeccccc----------ccEEEEEEc-CCC---CE
Q 036585 64 CFTSHPTTVIYSSKNG-------------WDESLRLLSLHDNKYSRYFKGHH----------DRVVLLSLC-SSK---DC 116 (304)
Q Consensus 64 ~~~~~~~~l~~~~~~~-------------~d~~i~vwd~~~~~~~~~~~~~~----------~~v~~~~~~-~~~---~~ 116 (304)
++.+....++.+..+. +.+.|.-+|..+++.+..++... .++. +... .+| ..
T Consensus 247 a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~ 325 (599)
T 1w6s_A 247 AYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKL 325 (599)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEE
T ss_pred eEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEE
Confidence 5666777777776521 12479999999998876655321 2222 2332 466 46
Q ss_pred EEEcccCCeEEEEeCCcceeeceEEEeccce--eEec-CCCeEEEec------CCCeEEEEecCC--CCCceEEEEecCC
Q 036585 117 FISGSLDRTVLLWDQRAEKCQGLLRVQGRPA--AAYD-DQGLVFGYE------KGPLDIFSVGGD--ISDANVVKFSNDG 185 (304)
Q Consensus 117 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~------~~~~~~~~~~~~--~~~v~~~~~~~~~ 185 (304)
++.++.+|.++++|.++++.+.......... ...+ +.+..+... .... .....+. ...-..++++|+.
T Consensus 326 v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~-~~~~P~~~Gg~~w~~~a~dp~~ 404 (599)
T 1w6s_A 326 LTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLA-KDICPSAMGYHNQGHDSYDPKR 404 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCE-EEESSCTTCSSCSCBCEEETTT
T ss_pred EEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCc-cEeccCcccccCCCCccCCCCC
Confidence 7778999999999999998877655322100 0000 000000000 0000 0000000 0001123333333
Q ss_pred cEEEEe---------------------------------e------CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEE
Q 036585 186 RLMLLT---------------------------------T------MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASF 226 (304)
Q Consensus 186 ~~l~~~---------------------------------~------~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~ 226 (304)
.++++. + ..|.|.-||+.+++.+.+.... .+...-.+
T Consensus 405 ~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~----~~~~~g~~ 480 (599)
T 1w6s_A 405 ELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER----FAVWGGTM 480 (599)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES----SCCCSBCE
T ss_pred CEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC----CCccCcce
Confidence 322221 1 3578999999999998887632 11111112
Q ss_pred cCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCC-ceEEeCCCCc-EEEE
Q 036585 227 SPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEP-PVIKWAPGSL-MFVT 277 (304)
Q Consensus 227 s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~-~l~s 277 (304)
...+..++.++.|+.++.||.++++.+.+++...+.+ .-+.+..+|+ ++++
T Consensus 481 ~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~~G~qyv~~ 533 (599)
T 1w6s_A 481 ATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTHKGTQYVAI 533 (599)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred EecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEeCCEEEEEE
Confidence 2356678889999999999999999988875443222 2355666776 4443
No 263
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.97 E-value=3.8e-06 Score=66.93 Aligned_cols=206 Identities=10% Similarity=-0.049 Sum_probs=122.8
Q ss_pred cEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEE
Q 036585 28 IYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVL 107 (304)
Q Consensus 28 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~ 107 (304)
.+|+.+.. ..|+..++........+.. ...+..++|.+....|+.+... .+.|..+++........+.........
T Consensus 45 ~~ll~~~~-~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~--~~~I~r~~~~g~~~~~~~~~~~~~p~g 120 (349)
T 3v64_C 45 PVLLFANR-IDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVT--LDRILRANLNGSNVEEVVSTGLESPGG 120 (349)
T ss_dssp CEEEEECB-SCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred ceeEeecc-cceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEecc--CCceEEEecCCCCceEEEeCCCCCccE
Confidence 34444433 4588888775544433333 3357899999877777776543 788999998766533333322234567
Q ss_pred EEEcCCCC-EEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCc
Q 036585 108 LSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGR 186 (304)
Q Consensus 108 ~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 186 (304)
+++.+.+. ++++-...+.|.+.++......... .........++++|.+.
T Consensus 121 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-----------------------------~~~l~~P~~iavdp~~g 171 (349)
T 3v64_C 121 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-----------------------------WQSLEKPRAIALHPMEG 171 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-----------------------------CTTCSCEEEEEEETTTT
T ss_pred EEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE-----------------------------eCCCCCcceEEEecCcC
Confidence 88887444 4455555678888887643221111 01223457899998665
Q ss_pred EEEEee-CC-CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec-CCCcEEEEecCCCceeeeeeccCCCC
Q 036585 187 LMLLTT-ME-GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVHAWSVRSGKEVASWMSFDTEP 263 (304)
Q Consensus 187 ~l~~~~-~d-g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~i 263 (304)
.|+.+. .. +.|..+++.... ...+.. ..-.....++++|++..|+.+. ..+.|..+|+........+.......
T Consensus 172 ~ly~td~~~~~~I~r~~~dG~~-~~~~~~--~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P 248 (349)
T 3v64_C 172 TIYWTDWGNTPRIEASSMDGSG-RRIIAD--THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHP 248 (349)
T ss_dssp EEEEEECSSSCEEEEEETTSCS-CEESCC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSE
T ss_pred eEEEeccCCCCEEEEEeCCCCC-cEEEEE--CCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCc
Confidence 555543 34 789999876433 222211 2334567899998777666654 56789999986433222222233455
Q ss_pred ceEEeC
Q 036585 264 PVIKWA 269 (304)
Q Consensus 264 ~~~~~~ 269 (304)
..+++.
T Consensus 249 ~giav~ 254 (349)
T 3v64_C 249 FAITVF 254 (349)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 777773
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.97 E-value=3.5e-06 Score=67.14 Aligned_cols=215 Identities=7% Similarity=-0.040 Sum_probs=125.1
Q ss_pred eeEeecccC-cEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 19 EILQSMEVG-IYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 19 ~~i~~~~~~-~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
..+.+.+.+ .++.+-...+.|..+++........+.........+++.+.+..|+.+... .+.|.+.++........
T Consensus 76 ~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~--~~~I~~~~~dG~~~~~l 153 (349)
T 3v64_C 76 IALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG--TSRIEVANLDGAHRKVL 153 (349)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEE
T ss_pred EEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCC--CCeEEEEcCCCCceEEE
Confidence 345555444 444444456778888877654333333333456788998877666666542 77899999875443333
Q ss_pred cccccccEEEEEEcCCCCEEEEcc-cC-CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCC
Q 036585 98 FKGHHDRVVLLSLCSSKDCFISGS-LD-RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISD 175 (304)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
+.........+++.|.+..|+... .. +.|...++.......... .....
T Consensus 154 ~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-----------------------------~~~~~ 204 (349)
T 3v64_C 154 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-----------------------------THLFW 204 (349)
T ss_dssp ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC-----------------------------SSCSC
T ss_pred EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE-----------------------------CCCCC
Confidence 333334568899998665555443 33 677777765432211110 11234
Q ss_pred ceEEEEecCCcEEEEe-eCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceee
Q 036585 176 ANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVA 254 (304)
Q Consensus 176 v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~ 254 (304)
.+.++++|++..|+.+ ...+.|..+|+.... ...+.. ........+++. ++..+++-...+.|..++..+++...
T Consensus 205 PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~-~~~~~~--~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~ 280 (349)
T 3v64_C 205 PNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-RKAVIS--QGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQE 280 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEC--SSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred cceEEEeCCCCEEEEEECCCCEEEEEeCCCCc-eEEEEe--CCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccE
Confidence 5789999876666655 456789999976433 333321 123455677773 44555555567788888866776655
Q ss_pred eeeccCCCCceEEe
Q 036585 255 SWMSFDTEPPVIKW 268 (304)
Q Consensus 255 ~~~~~~~~i~~~~~ 268 (304)
.+.........+++
T Consensus 281 ~i~~~~~~p~gi~v 294 (349)
T 3v64_C 281 IIRNKLHFPMDIHT 294 (349)
T ss_dssp EEECSCSCCCCEEE
T ss_pred EeccCCCCCceEEE
Confidence 55433333444443
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.95 E-value=2.5e-06 Score=68.97 Aligned_cols=215 Identities=7% Similarity=-0.041 Sum_probs=127.3
Q ss_pred eeEeeccc-CcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 19 EILQSMEV-GIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 19 ~~i~~~~~-~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
..+.+.+. +.++++-...+.|..+++........+.........+++.+.+..|+.+... .+.|.+.++........
T Consensus 119 ~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~--~~~I~~~~~dg~~~~~l 196 (386)
T 3v65_B 119 IALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSG--TSRIEVANLDGAHRKVL 196 (386)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETT--TTEEEECBTTSCSCEEE
T ss_pred EEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCC--CCeEEEEeCCCCceEEe
Confidence 34556654 4444455566788888887654433333333356678998877766666542 67888888765443333
Q ss_pred cccccccEEEEEEcCCCCEEEEcc-cC-CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCC
Q 036585 98 FKGHHDRVVLLSLCSSKDCFISGS-LD-RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISD 175 (304)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
+.........+++.|.+..|+.+. .. +.|..+++.......... .....
T Consensus 197 ~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~-----------------------------~~~~~ 247 (386)
T 3v65_B 197 LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD-----------------------------THLFW 247 (386)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-----------------------------SSCSC
T ss_pred ecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE-----------------------------CCCCC
Confidence 333335678899998666555543 33 567777765432211110 11234
Q ss_pred ceEEEEecCCcEEEEe-eCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceee
Q 036585 176 ANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVA 254 (304)
Q Consensus 176 v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~ 254 (304)
.+.|+++|++..|+.+ ...+.|..+|+.... ...+.. ........+++ ..+..+++-...+.|..+|..+++.+.
T Consensus 248 PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~--~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~ 323 (386)
T 3v65_B 248 PNGLTIDYAGRRMYWVDAKHHVIERANLDGSH-RKAVIS--QGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQE 323 (386)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEECTTSCS-CEEEEC--SSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred eeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe-eEEEEE--CCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceE
Confidence 5789999876666555 456789999976433 333321 22345567777 344555555667889999877777666
Q ss_pred eeeccCCCCceEEe
Q 036585 255 SWMSFDTEPPVIKW 268 (304)
Q Consensus 255 ~~~~~~~~i~~~~~ 268 (304)
.+.........|++
T Consensus 324 ~i~~~~~~p~gi~v 337 (386)
T 3v65_B 324 IIRNKLHFPMDIHT 337 (386)
T ss_dssp EEECSCSCCCCEEE
T ss_pred EEccCCCCCceEEE
Confidence 66544344455554
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.93 E-value=2.6e-07 Score=81.33 Aligned_cols=197 Identities=10% Similarity=0.046 Sum_probs=111.1
Q ss_pred ceeEEEEc-cCCCeEEEEecCCC--CCceEEEEccCc-eeeeecccccccEEEEEEcCCCCEEEEcccC-----CeEEEE
Q 036585 59 GVDLVCFT-SHPTTVIYSSKNGW--DESLRLLSLHDN-KYSRYFKGHHDRVVLLSLCSSKDCFISGSLD-----RTVLLW 129 (304)
Q Consensus 59 ~v~~~~~~-~~~~~l~~~~~~~~--d~~i~vwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iw 129 (304)
.+...+|| |||++|+.+...+. ...|+++|+.++ +.+... -......+.|+||++.|+....+ ..|+.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 57789999 99999988765210 135999999998 632210 11123468899999888777654 257777
Q ss_pred eCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeC---CCeEEEEEcCCCc
Q 036585 130 DQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTM---EGHIHVLDSFRGT 206 (304)
Q Consensus 130 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~ 206 (304)
++.++.....+. +.- ........+.|+|||++|+..+. ...|+++|+.++.
T Consensus 253 ~lgt~~~~~~lv-------------------------~~~-~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~ 306 (751)
T 2xe4_A 253 VMGKLQSEDVCL-------------------------YEE-HNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGN 306 (751)
T ss_dssp ETTSCGGGCEEE-------------------------EEC-CCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCT
T ss_pred ECCCCchhcEEE-------------------------Eec-CCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCC
Confidence 776654221111 100 11123456889999998887653 3468899988752
Q ss_pred -ee--EEEEeCCCCCCcceEEEEcCCCcEEEEecCC----CcEEEEecCCCceeee-eeccCC--CCceEEeCCCCcEEE
Q 036585 207 -LL--STYNVKPVSRNSTLEASFSPEGMFVISGSGD----GSVHAWSVRSGKEVAS-WMSFDT--EPPVIKWAPGSLMFV 276 (304)
Q Consensus 207 -~~--~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~i~v~d~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~l~ 276 (304)
.. ..+. .........+.|+.++.+++....+ ..|..+|+.++..... +..+.. .+..+.+. .+.+++
T Consensus 307 ~~~~~~~l~--~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~ 383 (751)
T 2xe4_A 307 AHNTLEIVR--PREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVV 383 (751)
T ss_dssp TCCCEEESS--CCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEE
T ss_pred CCceeEEee--cCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEE
Confidence 11 2221 1233445555555444455555443 3577777764322233 333433 34455554 234445
Q ss_pred EecCc--eEEec
Q 036585 277 TGSSE--LSFWI 286 (304)
Q Consensus 277 s~~~d--~~iw~ 286 (304)
+...+ .+||.
T Consensus 384 ~~~~~g~~~l~~ 395 (751)
T 2xe4_A 384 AGRRAGLTRIWT 395 (751)
T ss_dssp EEEETTEEEEEE
T ss_pred EEEeCCEEEEEE
Confidence 55544 34443
No 267
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.93 E-value=2.9e-06 Score=69.60 Aligned_cols=231 Identities=12% Similarity=0.093 Sum_probs=129.0
Q ss_pred ceeeEeecc-cCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCC--CCceEEEEccCce
Q 036585 17 SEEILQSME-VGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGW--DESLRLLSLHDNK 93 (304)
Q Consensus 17 ~~~~i~~~~-~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--d~~i~vwd~~~~~ 93 (304)
.+..+.+.| ++..|+.+...+.|+.+|++++...... ........++|+++++.|+++...+. ...+..++. .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~ 215 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESG 215 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGT
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCc
Confidence 345577776 4455555555478999998866544333 34456889999999997777654210 112333443 332
Q ss_pred ee--eecccccccEEEEEEcC-CCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEec
Q 036585 94 YS--RYFKGHHDRVVLLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVG 170 (304)
Q Consensus 94 ~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
.. ..+. .......++++| ++.++++-..++.|..++...+........
T Consensus 216 ~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~---------------------------- 266 (430)
T 3tc9_A 216 FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTI---------------------------- 266 (430)
T ss_dssp SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEEC----------------------------
T ss_pred eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEc----------------------------
Confidence 21 2222 123346788999 677666666778999999876543221111
Q ss_pred CCCCCceEEEEecCCcEEEEe-eCCCeEEEEEcCC--Cce--eEEEEeCCCC------------CCcce-EEEEc-----
Q 036585 171 GDISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFR--GTL--LSTYNVKPVS------------RNSTL-EASFS----- 227 (304)
Q Consensus 171 ~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~--~~~--~~~~~~~~~~------------~~~i~-~~~~s----- 227 (304)
........++|+|+|++|+++ ...+.|..++... ++. ...+...... -.... .++..
T Consensus 267 ~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~ 346 (430)
T 3tc9_A 267 QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYK 346 (430)
T ss_dssp SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGT
T ss_pred CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEcccccc
Confidence 111345679999999955554 5677899987653 222 2222211000 01122 34443
Q ss_pred ---CCCcEEEEecCCCcEEEEecCCCceeeeeecc------------------CCCCceEEeCCCCcEEEEecC
Q 036585 228 ---PEGMFVISGSGDGSVHAWSVRSGKEVASWMSF------------------DTEPPVIKWAPGSLMFVTGSS 280 (304)
Q Consensus 228 ---~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------------------~~~i~~~~~~~~~~~l~s~~~ 280 (304)
+++.+.++=..++.|+.++ .+++.. .+.+. -.....|+++|++..|+.+..
T Consensus 347 ~~D~~g~lyvaD~~n~~I~~i~-~~G~v~-~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 418 (430)
T 3tc9_A 347 GSSDEYDFYFCDRENHCIRILT-PQGRVT-TFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR 418 (430)
T ss_dssp TSSCCEEEEEEEGGGTEEEEEC-TTSEEE-EEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred ccCCCCeEEEEECCCcEEEEEC-CCCcEE-EEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC
Confidence 3455555555667888888 455432 22211 114678999995444444443
No 268
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.91 E-value=5.6e-06 Score=73.60 Aligned_cols=258 Identities=10% Similarity=0.065 Sum_probs=157.2
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeec------ccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecc
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTIN------SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFK 99 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~ 99 (304)
+|. |-.|+.++-|..|+..+........ .....|.++...+++. |..|+. ++-|..|+..+++......
T Consensus 320 ~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~---~~Gl~~~~~~~~~~~~~~~ 394 (795)
T 4a2l_A 320 QGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTN---DGGLNLYNPITQRFTSYTL 394 (795)
T ss_dssp TSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEES---SSCEEEECTTTCCEEEECC
T ss_pred CcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEEC---CCCeEEEcCCCCcEEEEec
Confidence 344 4456666668888876544221111 1234688898887775 555665 7789999988765433221
Q ss_pred c--------ccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEE------EeccceeEecCCCeEEEecCCCeE
Q 036585 100 G--------HHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR------VQGRPAAAYDDQGLVFGYEKGPLD 165 (304)
Q Consensus 100 ~--------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
. ....|.++...++++.|..|+.++-+..||.++++...... ......+..++++.+.....+.+.
T Consensus 395 ~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~ 474 (795)
T 4a2l_A 395 QEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALV 474 (795)
T ss_dssp C------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEE
T ss_pred CCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCcee
Confidence 1 23578999988888756667776779999987765332211 011123344555544433334555
Q ss_pred EEEecC---------------CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEe----CCCCCCcceEEEE
Q 036585 166 IFSVGG---------------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV----KPVSRNSTLEASF 226 (304)
Q Consensus 166 ~~~~~~---------------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~----~~~~~~~i~~~~~ 226 (304)
.++... ....|.++...++|.+.+ |+. +-+..||..+++. .+.. .......|.++..
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~ 550 (795)
T 4a2l_A 475 RFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWI-GGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYE 550 (795)
T ss_dssp EEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEE-EES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEE
T ss_pred EEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEE-EeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEE
Confidence 554321 124578888888887544 444 5588899877665 3321 0113456888999
Q ss_pred cCCCcEEEEecCCCcEEEEecCCCceeeeeec----cCCCCceEEeCCCCcEEEEecCceEEeccCCcccccc
Q 036585 227 SPEGMFVISGSGDGSVHAWSVRSGKEVASWMS----FDTEPPVIKWAPGSLMFVTGSSELSFWIPDLSKLGAY 295 (304)
Q Consensus 227 s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~s~~~d~~iw~~~~~~~~~~ 295 (304)
+++|++.++.. . -|..||..+.+. ..+.. ....|.++...++|.+.+++...+..|+.+..++..+
T Consensus 551 d~~g~lWigT~-~-Gl~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~~Gl~~~~~~~~~~~~~ 620 (795)
T 4a2l_A 551 ASNGIIWVGTR-E-GFYCFNEKDKQI-KRYNTTNGLPNNVVYGILEDSFGRLWLSTNRGISCFNPETEKFRNF 620 (795)
T ss_dssp CTTSCEEEEES-S-CEEEEETTTTEE-EEECGGGTCSCSCEEEEEECTTSCEEEEETTEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEeC-C-CceeECCCCCcE-EEeCCCCCCchhheEEEEECCCCCEEEEcCCceEEEcCCCCcEEEc
Confidence 99988665544 3 488899876543 23321 1345788889999988877765588888876665544
No 269
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.90 E-value=1.3e-05 Score=65.08 Aligned_cols=205 Identities=12% Similarity=0.024 Sum_probs=124.4
Q ss_pred cEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCc----eeeeecccccc
Q 036585 28 IYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN----KYSRYFKGHHD 103 (304)
Q Consensus 28 ~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~----~~~~~~~~~~~ 103 (304)
.+|+.+. ...|+..++........+. ....+..++|.+....|+.+... .+.|+.+++... .....+.....
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETT--TTEEEEEEC------CCCEEEECSSCS
T ss_pred ceeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecC--CCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 3555554 3679999988665444333 34468899999987777777543 788988888652 22222332334
Q ss_pred cEEEEEEcC-CCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEe
Q 036585 104 RVVLLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFS 182 (304)
Q Consensus 104 ~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 182 (304)
....+++.+ .++++++-...+.|.+.+++.......+. ........++++
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-----------------------------~~~~~P~~iavd 210 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-----------------------------ENGSKPRAIVVD 210 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEE-----------------------------CSSCCEEEEEEE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEe-----------------------------CCCCCcceEEEe
Confidence 567888887 44455555567788888876543322221 122346789999
Q ss_pred cCCcEEEEeeC--CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec-CCCcEEEEecCCCceeeeeec-
Q 036585 183 NDGRLMLLTTM--EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVHAWSVRSGKEVASWMS- 258 (304)
Q Consensus 183 ~~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~- 258 (304)
|.+..|+.+.. .+.|...++.... ...+.. ..-.....++++|++..|+.+. ..+.|..+|+...........
T Consensus 211 p~~g~ly~td~~~~~~I~~~~~dG~~-~~~~~~--~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~ 287 (400)
T 3p5b_L 211 PVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE 287 (400)
T ss_dssp TTTTEEEEEECSSSCCEEEEETTSCS-CEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECS
T ss_pred cccCeEEEEeCCCCCEEEEEeCCCCc-cEEEEE--CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCC
Confidence 97666665542 4789999976433 333321 2335678899999877777664 567899999864333222221
Q ss_pred -cCCCCceEEe
Q 036585 259 -FDTEPPVIKW 268 (304)
Q Consensus 259 -~~~~i~~~~~ 268 (304)
.......+++
T Consensus 288 ~~l~~P~gl~v 298 (400)
T 3p5b_L 288 KRLAHPFSLAV 298 (400)
T ss_dssp STTSSEEEEEE
T ss_pred CCCCCCEEEEE
Confidence 1233456666
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.90 E-value=1.1e-06 Score=77.46 Aligned_cols=113 Identities=10% Similarity=0.111 Sum_probs=74.7
Q ss_pred eeEeec-ccCcEEEEeeC-CC----eEEEEecCCc-ceeee-ecccccceeEEEEccCCCeEEEEecCC--CCCceEEEE
Q 036585 19 EILQSM-EVGIYLVTASD-DE----SIRLYDVTAA-TCLKT-INSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLS 88 (304)
Q Consensus 19 ~~i~~~-~~~~~l~~~~~-d~----~i~vw~~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~vwd 88 (304)
....++ |||++||.+.. +| .|+++|+.++ +.+.. +. .....++|+||++.|+...... ....|++++
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 457899 99998885543 22 5999999988 63321 21 1245789999999988887510 013688888
Q ss_pred ccCcee--eeecc-cccccEEEEEEcCCCCEEEEccc---CCeEEEEeCCcc
Q 036585 89 LHDNKY--SRYFK-GHHDRVVLLSLCSSKDCFISGSL---DRTVLLWDQRAE 134 (304)
Q Consensus 89 ~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~ 134 (304)
+.+++. ...+. ........+.|+||+++|+..+. ...|+++|+.++
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 877642 22222 22334678899999998876553 346788888764
No 271
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.88 E-value=1.1e-06 Score=74.97 Aligned_cols=244 Identities=13% Similarity=0.064 Sum_probs=137.0
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeeccccc----cee-EEEEcc---CCC-eEEEEecC---CCCCceEEEEccCce
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTINSKKY----GVD-LVCFTS---HPT-TVIYSSKN---GWDESLRLLSLHDNK 93 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~----~v~-~~~~~~---~~~-~l~~~~~~---~~d~~i~vwd~~~~~ 93 (304)
.+..++.++.|+.|..+|.++++.+-....... .+. ...... +++ .+++++.. +.++.|+-+|..+++
T Consensus 116 ~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~ 195 (582)
T 1flg_A 116 YGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGE 195 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCC
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCC
Confidence 356788888999999999999998866543220 111 111111 233 55555421 127899999999998
Q ss_pred eeeecccccccE-----------------------------------------EEEEEcCCCCEEEEccc----------
Q 036585 94 YSRYFKGHHDRV-----------------------------------------VLLSLCSSKDCFISGSL---------- 122 (304)
Q Consensus 94 ~~~~~~~~~~~v-----------------------------------------~~~~~~~~~~~l~~~~~---------- 122 (304)
.+.........+ ..+++.|+..+++.+..
T Consensus 196 ~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 196 EIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGG
T ss_pred EEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCccc
Confidence 765443210000 12345555556665442
Q ss_pred ----------C----CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEe-cCC--
Q 036585 123 ----------D----RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFS-NDG-- 185 (304)
Q Consensus 123 ----------d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~-- 185 (304)
| +.|..+|.++++....+....... |+......++ -+... .+|
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~-------------------wd~~~~~~p~-l~~~~~~~G~~ 335 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDA-------------------WDFSGNNELV-LFDYKAKDGKI 335 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCC-------------------SCCCCCCCCE-EEEEECSSSCE
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCc-------------------ccccCCCCcE-EEeeecCCCCE
Confidence 2 467777777777766554321100 0000001111 12222 466
Q ss_pred -cEEEEeeCCCeEEEEEcCCCceeEEEEeCCCC----------CCc--------------------------------ce
Q 036585 186 -RLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS----------RNS--------------------------------TL 222 (304)
Q Consensus 186 -~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~----------~~~--------------------------------i~ 222 (304)
..++.++.+|.++++|.++|+.+..+...... ..+ -.
T Consensus 336 ~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~ 415 (582)
T 1flg_A 336 VKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWN 415 (582)
T ss_dssp EEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSS
T ss_pred EEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCC
Confidence 37888999999999999999998877642100 000 01
Q ss_pred EEEEcCCCcEEEEec---------------------------------CCCcEEEEecCCCceeeeeeccCCCCceEEeC
Q 036585 223 EASFSPEGMFVISGS---------------------------------GDGSVHAWSVRSGKEVASWMSFDTEPPVIKWA 269 (304)
Q Consensus 223 ~~~~s~~~~~l~~~~---------------------------------~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 269 (304)
.++++|+...+++.. .+|.|.-||+.+++.+-+..... ++..-...
T Consensus 416 ~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~ 494 (582)
T 1flg_A 416 PMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLA 494 (582)
T ss_dssp CCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-CCCSCCEE
T ss_pred CceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-CCcccceE
Confidence 356777655555432 35789999999999877765332 22221122
Q ss_pred CCCcEEEEecCc--eEEeccCCc
Q 036585 270 PGSLMFVTGSSE--LSFWIPDLS 290 (304)
Q Consensus 270 ~~~~~l~s~~~d--~~iw~~~~~ 290 (304)
..+.+++.++.| ++.|+.+..
T Consensus 495 tagglvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 495 TAGNLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp ETTTEEEEECTTSEEEEEETTTC
T ss_pred eCCCEEEEECCCCcEEEEECCCC
Confidence 235566667777 666666443
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.88 E-value=4.3e-06 Score=68.58 Aligned_cols=236 Identities=8% Similarity=-0.001 Sum_probs=131.1
Q ss_pred eeeEeeccc--CcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCC-CCC-ceEEEEccCce
Q 036585 18 EEILQSMEV--GIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG-WDE-SLRLLSLHDNK 93 (304)
Q Consensus 18 ~~~i~~~~~--~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-~d~-~i~vwd~~~~~ 93 (304)
+..+.+.++ +..|+.+...+.|+.++..+++..... ........++++++++ |+++...+ .+. .+...+...+.
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence 445677774 334444443378999998777655443 3444688999999999 55554310 011 13333332211
Q ss_pred e-eeecccccccEEEEEEcC-CCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecC
Q 036585 94 Y-SRYFKGHHDRVVLLSLCS-SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGG 171 (304)
Q Consensus 94 ~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
. ...+. .-.....++++| ++.++++-..++.|+.+|..++.....+... +
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~---------------------------~ 270 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM---------------------------D 270 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC---------------------------S
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc---------------------------C
Confidence 1 01111 123345688888 6766666667788999998766542222111 0
Q ss_pred CCCCceEEEEecCCcEEEEe-eCCCeEEEEEcC--CCcee--EEEEeCCC------------CCCcceEEEE--------
Q 036585 172 DISDANVVKFSNDGRLMLLT-TMEGHIHVLDSF--RGTLL--STYNVKPV------------SRNSTLEASF-------- 226 (304)
Q Consensus 172 ~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~--~~~~~--~~~~~~~~------------~~~~i~~~~~-------- 226 (304)
....-..++|+|+++.|+++ ...+.|+.++.. ++... ..+..... .-.....+++
T Consensus 271 ~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~ 350 (433)
T 4hw6_A 271 TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAG 350 (433)
T ss_dssp CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTT
T ss_pred CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccc
Confidence 11122469999999855555 456789998865 33221 22221100 1123556899
Q ss_pred -cCCCcEEEEecCCCcEEEEecCCCceeeeeecc------------------CCCCceEEeC-CCCcEEEEecCceEEe
Q 036585 227 -SPEGMFVISGSGDGSVHAWSVRSGKEVASWMSF------------------DTEPPVIKWA-PGSLMFVTGSSELSFW 285 (304)
Q Consensus 227 -s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~------------------~~~i~~~~~~-~~~~~l~s~~~d~~iw 285 (304)
.++++++++-..++.|+.++. ++.. ..+.+. -.....|+++ +++.++++=..+-+|.
T Consensus 351 dd~~g~lyvaD~~n~~I~~~~~-~G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr 427 (433)
T 4hw6_A 351 EEDEYDFYFCDRDSHTVRVLTP-EGRV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVR 427 (433)
T ss_dssp SSCCEEEEEEETTTTEEEEECT-TSEE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred cCCCCcEEEEECCCCEEEEECC-CCCE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 777777777677788999985 5533 232211 1235689999 5555554433333333
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.88 E-value=1.2e-05 Score=63.10 Aligned_cols=207 Identities=7% Similarity=-0.042 Sum_probs=121.9
Q ss_pred eeeEeecccC-cEEEEeeCCCeEEEEecCC----cceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCc
Q 036585 18 EEILQSMEVG-IYLVTASDDESIRLYDVTA----ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN 92 (304)
Q Consensus 18 ~~~i~~~~~~-~~l~~~~~d~~i~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~ 92 (304)
...+.+.+.+ .++++-..++.|..+++.+ ......+.........+++.+.+..|+.+... .+.|.+.++...
T Consensus 32 p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~--~~~I~~~~~~g~ 109 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVADTKGV 109 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEETTSS
T ss_pred eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECC--CCEEEEEeCCCC
Confidence 4456676654 4455555668899999875 22222232222356789998766666665432 789999998754
Q ss_pred eeeeecccccccEEEEEEcCCCCEEEEcccC--CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEec
Q 036585 93 KYSRYFKGHHDRVVLLSLCSSKDCFISGSLD--RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVG 170 (304)
Q Consensus 93 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
.....+.........+++.|.+..++.+... +.|...++..... ..+. .
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~~----------------------------~ 160 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLV----------------------------T 160 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEE----------------------------C
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEEE----------------------------E
Confidence 3332233233467889999866655554432 5777777653221 1111 0
Q ss_pred CCCCCceEEEEecCCcEEEEee-CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCC
Q 036585 171 GDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRS 249 (304)
Q Consensus 171 ~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~ 249 (304)
......+.++++|++..|+.+. ..+.|..+|+.. .....+............+++. .+..+++-...+.|..++..+
T Consensus 161 ~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~ 238 (316)
T 1ijq_A 161 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLT 238 (316)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCC
Confidence 1123457899998776666554 567999999864 3333333211122345677775 355555556678899999877
Q ss_pred Cceeeeee
Q 036585 250 GKEVASWM 257 (304)
Q Consensus 250 ~~~~~~~~ 257 (304)
++.+..+.
T Consensus 239 g~~~~~i~ 246 (316)
T 1ijq_A 239 GSDVNLLA 246 (316)
T ss_dssp CCCCEEEE
T ss_pred CcceEEEe
Confidence 77655553
No 274
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.86 E-value=1.4e-05 Score=62.78 Aligned_cols=205 Identities=12% Similarity=0.026 Sum_probs=122.9
Q ss_pred EEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC----ceeeeeccccccc
Q 036585 29 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD----NKYSRYFKGHHDR 104 (304)
Q Consensus 29 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~----~~~~~~~~~~~~~ 104 (304)
+|+.+.. ..|+..|+.+.+....+.. ...+..++|.+.+..|+.+... .+.|..+++.. ......+...-..
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~-~~~p~g~~~d~~~~~ly~~D~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 78 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQA 78 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETT--TTEEEEEEC--------CEEEECSSCSC
T ss_pred EEEEECC-CeEEEEECCCcceEehhcC-CCceEEEEEEeCCCEEEEEECC--CCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence 4444444 4699999987765554443 3467899999987777776653 78999999876 2222222222234
Q ss_pred EEEEEEcCCCC-EEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEec
Q 036585 105 VVLLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSN 183 (304)
Q Consensus 105 v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 183 (304)
...+++.+.+. ++++-...+.|.+.++.......... ........++++|
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~-----------------------------~~~~~P~~iavdp 129 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-----------------------------ENGSKPRAIVVDP 129 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-----------------------------CTTCCEEEEEEET
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEE-----------------------------CCCCCcceEEeCC
Confidence 57788886444 44454567889888876433221111 1123557899998
Q ss_pred CCcEEEEeeC-C-CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec-CCCcEEEEecCCCceeeeeec--
Q 036585 184 DGRLMLLTTM-E-GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVHAWSVRSGKEVASWMS-- 258 (304)
Q Consensus 184 ~~~~l~~~~~-d-g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~-- 258 (304)
.+..|+.+.. . +.|..+++. ++....+.. ..-.....++++|++..|+.+. ..+.|..+|+.. .....+..
T Consensus 130 ~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~--~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg-~~~~~~~~~~ 205 (316)
T 1ijq_A 130 VHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDE 205 (316)
T ss_dssp TTTEEEEEECSSSCEEEEEETT-SCCEEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEECT
T ss_pred CCCEEEEEccCCCCeEEEEcCC-CCCeEEEEE--CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC-CceEEEeecC
Confidence 6665655544 2 789888875 443333331 1335677899999877766654 567899999864 33333321
Q ss_pred -cCCCCceEEeCC
Q 036585 259 -FDTEPPVIKWAP 270 (304)
Q Consensus 259 -~~~~i~~~~~~~ 270 (304)
.......+++..
T Consensus 206 ~~~~~P~giav~~ 218 (316)
T 1ijq_A 206 KRLAHPFSLAVFE 218 (316)
T ss_dssp TTTSSEEEEEEET
T ss_pred CccCCcEEEEEEC
Confidence 123456777753
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.84 E-value=1.6e-05 Score=70.59 Aligned_cols=260 Identities=11% Similarity=0.066 Sum_probs=154.8
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeeeec---------ccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKTIN---------SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
+|. |-.|+.++-|..++..+........ .....|.++...+++. |..|+. ++-|..|+..+++...
T Consensus 323 ~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~---~~Gl~~~~~~~~~~~~ 397 (781)
T 3v9f_A 323 FNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTD---GGGINVFENGKRVAIY 397 (781)
T ss_dssp SCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEB---SSCEEEEETTEEEEEC
T ss_pred CCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeC---CCcEEEEECCCCeEEE
Confidence 344 4556656668888876544322110 1234688888877765 556665 6678889987654322
Q ss_pred ec---ccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEE----EeccceeEecCCCeEEEecCCCeEEEEe
Q 036585 97 YF---KGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR----VQGRPAAAYDDQGLVFGYEKGPLDIFSV 169 (304)
Q Consensus 97 ~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
.. ......|.++...+++.+.+ |+.++-+..+|.++++...... ......+..++++.+.....+.+..++.
T Consensus 398 ~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~ 476 (781)
T 3v9f_A 398 NKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDL 476 (781)
T ss_dssp C-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEES
T ss_pred ccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeC
Confidence 11 12345789998887776544 6666678889887665432211 0111234445555554433344555543
Q ss_pred cC---------C-----CCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeC-CCCCCcceEEEEcCCCcEEE
Q 036585 170 GG---------D-----ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK-PVSRNSTLEASFSPEGMFVI 234 (304)
Q Consensus 170 ~~---------~-----~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~ 234 (304)
.. . ...|.++...++|. |.+|+..+-+..||..+++. ..+... ......|.++..+++|.+.+
T Consensus 477 ~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi 554 (781)
T 3v9f_A 477 ASKKVIHHYDTSNSQLLENFVRSIAQDSEGR-FWIGTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWL 554 (781)
T ss_dssp SSSSCCEEECTTTSSCSCSCEEEEEECTTCC-EEEEESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEE
T ss_pred CCCeEEecccCcccccccceeEEEEEcCCCC-EEEEEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEE
Confidence 22 1 24577888888887 45556544577898766543 333211 11345788999988888666
Q ss_pred EecCCCcEEEEecCCCceeeeeec----cCCCCceEEeCCCCcEEEEecCceEEeccCCcccccc
Q 036585 235 SGSGDGSVHAWSVRSGKEVASWMS----FDTEPPVIKWAPGSLMFVTGSSELSFWIPDLSKLGAY 295 (304)
Q Consensus 235 ~~~~dg~i~v~d~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~s~~~d~~iw~~~~~~~~~~ 295 (304)
+.. +|.|..||.++++. ..+.. ....|.++...++|.+.+++...+..++.+..++..+
T Consensus 555 ~T~-~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t~~Gl~~~~~~~~~~~~~ 617 (781)
T 3v9f_A 555 ATG-EGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWASTNTGISCYITSKKCFYTY 617 (781)
T ss_dssp EET-TEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEECSSCEEEEETTTTEEEEE
T ss_pred EEC-CCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEcCCceEEEECCCCceEEe
Confidence 554 67558899876653 23321 1246788999999988877765577787776655443
No 276
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.82 E-value=5.4e-06 Score=62.34 Aligned_cols=206 Identities=12% Similarity=0.114 Sum_probs=125.1
Q ss_pred ceeeEeecccCc-EEEEeeCCCeEEEEecCCcceeeeeccc-ccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee
Q 036585 17 SEEILQSMEVGI-YLVTASDDESIRLYDVTAATCLKTINSK-KYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 94 (304)
Q Consensus 17 ~~~~i~~~~~~~-~l~~~~~d~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~ 94 (304)
...-+++.++++ ++++...++.|...|.. ++.++.+... ......+++.+++.++++.-. ++.+.++++.....
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~---~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDER---DYAIYVISLTPNSE 103 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETT---TTEEEEEEECTTCC
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECC---CCcEEEEEcCCCCe
Confidence 344577888755 55557778889999987 8877776422 246778888888865554333 77888888765432
Q ss_pred e---eec------ccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeE
Q 036585 95 S---RYF------KGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLD 165 (304)
Q Consensus 95 ~---~~~------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
+ ... .........++|.|.++.|+++.......+|.+........+.......
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~------------------ 165 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA------------------ 165 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH------------------
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchh------------------
Confidence 1 111 1123456899999998777777665555555543100000010000000
Q ss_pred EEEecCCCCCceEEEEecC-CcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCC------CCcceEEEEcCCCcEEEEecC
Q 036585 166 IFSVGGDISDANVVKFSND-GRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVS------RNSTLEASFSPEGMFVISGSG 238 (304)
Q Consensus 166 ~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~------~~~i~~~~~s~~~~~l~~~~~ 238 (304)
+.-......+..++++|. +.+++.+..+..+..+|. +++.+..+....+. -...-.++|.++|+..++ ++
T Consensus 166 -~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE 242 (255)
T 3qqz_A 166 -LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SE 242 (255)
T ss_dssp -HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ET
T ss_pred -hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cC
Confidence 000012245788999995 556666777788999995 46677777754322 135678999999985544 66
Q ss_pred CCcEEEEec
Q 036585 239 DGSVHAWSV 247 (304)
Q Consensus 239 dg~i~v~d~ 247 (304)
-+.++++.-
T Consensus 243 ~n~~y~f~~ 251 (255)
T 3qqz_A 243 PNRFYRFTP 251 (255)
T ss_dssp TTEEEEEEC
T ss_pred CceEEEEEe
Confidence 666776653
No 277
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.82 E-value=1.6e-05 Score=62.16 Aligned_cols=206 Identities=13% Similarity=0.048 Sum_probs=118.6
Q ss_pred ceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEccc-C-Ce
Q 036585 48 TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSL-D-RT 125 (304)
Q Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-g~ 125 (304)
+.+..+... .....++|+++++.+++-.. ++.|..||.... ....+. ....+..+++.++++++++... + ..
T Consensus 23 ~~~~~~p~~-~~pegia~~~~g~lyv~d~~---~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~ 96 (306)
T 2p4o_A 23 KIITSFPVN-TFLENLASAPDGTIFVTNHE---VGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIP 96 (306)
T ss_dssp EEEEEECTT-CCEEEEEECTTSCEEEEETT---TTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCE
T ss_pred eEeEeCCCC-CCcceEEECCCCCEEEEeCC---CCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcce
Confidence 344444332 35678999999885555545 889999997754 222222 2356889999999986665433 2 24
Q ss_pred EEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCC
Q 036585 126 VLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG 205 (304)
Q Consensus 126 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 205 (304)
|..+|..+++........ .......++..+++..+++-..++.|+++|..++
T Consensus 97 v~~~d~~~g~~~~~~~~~----------------------------~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 97 VVSLVKSDGTVETLLTLP----------------------------DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEEEECTTSCEEEEEECT----------------------------TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred EEEEcCCCCeEEEEEeCC----------------------------CccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 666776666543222110 0011233444455554554446889999997654
Q ss_pred ceeEEEEe-------CCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecCC-Cce--eeeeeccCCCCceEEeCCCCcE
Q 036585 206 TLLSTYNV-------KPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVRS-GKE--VASWMSFDTEPPVIKWAPGSLM 274 (304)
Q Consensus 206 ~~~~~~~~-------~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~~-~~~--~~~~~~~~~~i~~~~~~~~~~~ 274 (304)
+....... ....-.....+ +|++++|+.+ ...+.|..|++.. ++. ...+. .......++++++|++
T Consensus 149 ~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l 225 (306)
T 2p4o_A 149 SGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNL 225 (306)
T ss_dssp EEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCE
T ss_pred cEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCE
Confidence 32111110 00111233445 7888766655 4567899999864 332 12221 1245788999999987
Q ss_pred EEEecCc--eEEeccCCc
Q 036585 275 FVTGSSE--LSFWIPDLS 290 (304)
Q Consensus 275 l~s~~~d--~~iw~~~~~ 290 (304)
+++.... +.+++.+.+
T Consensus 226 ~va~~~~~~V~~~~~~G~ 243 (306)
T 2p4o_A 226 YGATHIYNSVVRIAPDRS 243 (306)
T ss_dssp EEECBTTCCEEEECTTCC
T ss_pred EEEeCCCCeEEEECCCCC
Confidence 6665433 777776643
No 278
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.81 E-value=2.1e-05 Score=61.66 Aligned_cols=208 Identities=10% Similarity=-0.010 Sum_probs=121.9
Q ss_pred EEEEeeCCCeEEEEecCCcc-eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee-ecccccccEE
Q 036585 29 YLVTASDDESIRLYDVTAAT-CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR-YFKGHHDRVV 106 (304)
Q Consensus 29 ~l~~~~~d~~i~vw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~-~~~~~~~~v~ 106 (304)
+|+.+. ...|+..++.... ....+......+..++|.+....|+.+... .+.|..+++..+.... .+...-....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~--~~~I~r~~~~g~~~~~~~~~~~l~~p~ 82 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS--EEAIKRTEFNKTESVQNVVVSGLLSPD 82 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETT--TTEEEEEETTSSSCCCEEEEECCSCCC
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECC--CCcEEEEEccCCCceEEEEcCCCCCcc
Confidence 344433 3579999988653 122222222356789999877777766543 7889999987653211 2222223456
Q ss_pred EEEEcCC-CCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCC
Q 036585 107 LLSLCSS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDG 185 (304)
Q Consensus 107 ~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 185 (304)
.+++.+. +.++++-...+.|.++++...... .+. .........+++.|.+
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-~l~----------------------------~~~~~~P~giavdp~~ 133 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLF----------------------------WQELDQPRAIALDPSS 133 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEE----------------------------CSSCSSEEEEEEEGGG
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-EEE----------------------------eCCCCCccEEEEeCCC
Confidence 7888864 444455556678888887643221 111 0122345789999876
Q ss_pred cEEEEee--CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecCCCceeeeeeccCCC
Q 036585 186 RLMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVRSGKEVASWMSFDTE 262 (304)
Q Consensus 186 ~~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~ 262 (304)
..|+.+. ..+.|..+++.. +....+.. ..-.....++++|++..|+.+ ...+.|..+|+..........+....
T Consensus 134 g~ly~td~~~~~~I~r~~~dG-~~~~~~~~--~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~ 210 (318)
T 3sov_A 134 GFMYWTDWGEVPKIERAGMDG-SSRFIIIN--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPH 210 (318)
T ss_dssp TEEEEEECSSSCEEEEEETTS-CSCEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSC
T ss_pred CEEEEEecCCCCEEEEEEcCC-CCeEEEEE--CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCC
Confidence 6666655 357899998753 33333321 123456789999977766666 45678999998643322222223344
Q ss_pred CceEEeCCC
Q 036585 263 PPVIKWAPG 271 (304)
Q Consensus 263 i~~~~~~~~ 271 (304)
...+++..+
T Consensus 211 P~glav~~~ 219 (318)
T 3sov_A 211 PFALTLFED 219 (318)
T ss_dssp EEEEEEETT
T ss_pred ceEEEEeCC
Confidence 567777543
No 279
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.79 E-value=3.5e-05 Score=62.57 Aligned_cols=216 Identities=8% Similarity=-0.012 Sum_probs=124.0
Q ss_pred eeEeecccCcE-EEEeeCCCeEEEEecCCc----ceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCce
Q 036585 19 EILQSMEVGIY-LVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK 93 (304)
Q Consensus 19 ~~i~~~~~~~~-l~~~~~d~~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~ 93 (304)
..+.+.+.+.. +.+-...+.|+.+++... .....+.........+++.+.+..|+.+... .+.|.+.++....
T Consensus 115 ~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~--~~~I~~~~~~g~~ 192 (400)
T 3p5b_L 115 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVK 192 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETT--TTEEEEECTTTCS
T ss_pred eEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECC--CCeEEEEeCCCCc
Confidence 34556654444 444445677888887642 2222233233467789998866666666542 7889999987654
Q ss_pred eeeecccccccEEEEEEcCCCCEEEEccc--CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecC
Q 036585 94 YSRYFKGHHDRVVLLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGG 171 (304)
Q Consensus 94 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
....+.........+++.|.+..|+.... .+.|...++.......... .
T Consensus 193 ~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~-----------------------------~ 243 (400)
T 3p5b_L 193 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-----------------------------E 243 (400)
T ss_dssp EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC-----------------------------S
T ss_pred eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE-----------------------------C
Confidence 43333333345788999986665555442 3567777765332211110 1
Q ss_pred CCCCceEEEEecCCcEEEEee-CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCC
Q 036585 172 DISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSG 250 (304)
Q Consensus 172 ~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~ 250 (304)
.....+.|++++++..|+.+. ..+.|..+|+.... ...+............+++. .+..+.+-...+.|..+|..++
T Consensus 244 ~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 244 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC-CEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc-cEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCC
Confidence 123567899998777676664 46789999986443 33333211122344567763 3344555556778999997777
Q ss_pred ceeeeeeccCCCCceEE
Q 036585 251 KEVASWMSFDTEPPVIK 267 (304)
Q Consensus 251 ~~~~~~~~~~~~i~~~~ 267 (304)
+.+..+.........+.
T Consensus 322 ~~~~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 322 SDVNLLAENLLSPEDMV 338 (400)
T ss_dssp CCCEEEECSCSCEEEEE
T ss_pred CceEEEecCCCCCceEE
Confidence 76666543333344443
No 280
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.78 E-value=3.2e-05 Score=68.59 Aligned_cols=257 Identities=10% Similarity=0.070 Sum_probs=147.2
Q ss_pred EEEEeeCCCeEEEEecCCcceeeeec-------ccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccc-
Q 036585 29 YLVTASDDESIRLYDVTAATCLKTIN-------SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKG- 100 (304)
Q Consensus 29 ~l~~~~~d~~i~vw~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~- 100 (304)
.|..++.++-|..||..+++...... .....|.++...+++... .++. + -+.+||..+++.......
T Consensus 175 ~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lw-igt~---~-Gl~~~d~~~~~~~~~~~~~ 249 (781)
T 3v9f_A 175 KLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNGNIW-IGTS---K-GLALFNANTETFTNFHNNP 249 (781)
T ss_dssp EEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTCCEE-EEET---T-EEEEEETTTTEEEC-----
T ss_pred CEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCCCEE-EEeC---C-cHheECCCCCcEEEEEcCC
Confidence 34445555458888877665432111 112468888887777544 4553 5 688999877654322111
Q ss_pred ------ccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEE-------E---------eccceeEecCCCeE-E
Q 036585 101 ------HHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR-------V---------QGRPAAAYDDQGLV-F 157 (304)
Q Consensus 101 ------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~---------~~~~~~~~~~~~~~-~ 157 (304)
....|.++...+++. +..|+..+-|.++|..+........ . .....+..+.++.+ +
T Consensus 250 ~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWi 328 (781)
T 3v9f_A 250 GNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWI 328 (781)
T ss_dssp ------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEE
T ss_pred CccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEE
Confidence 235688988887775 4555554567888887654322211 0 01112344555543 3
Q ss_pred EecCCCeEEEEecC------------------CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCC
Q 036585 158 GYEKGPLDIFSVGG------------------DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRN 219 (304)
Q Consensus 158 ~~~~~~~~~~~~~~------------------~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~ 219 (304)
+...+.+..++... ....|.++...++|. |.+|+.++-|..||..+++.............
T Consensus 329 gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~ 407 (781)
T 3v9f_A 329 GTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSN 407 (781)
T ss_dssp EEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCS
T ss_pred EecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCc
Confidence 44355554443221 124577888877776 56677667788999765433221111112346
Q ss_pred cceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeee---ccCCCCceEEeCCCCcEEEEecCceEEeccCCccccc
Q 036585 220 STLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWM---SFDTEPPVIKWAPGSLMFVTGSSELSFWIPDLSKLGA 294 (304)
Q Consensus 220 ~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~s~~~d~~iw~~~~~~~~~ 294 (304)
.|.++...+++.+.+ |+.++-|..+|.++++.. .+. .....|.++...+++.+.+.....+..++.+..++..
T Consensus 408 ~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 408 SVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKKVIH 483 (781)
T ss_dssp BEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSSCCE
T ss_pred ceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCeEEe
Confidence 788898888886554 555566999998766542 222 1345788999888888766655337778776655443
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.75 E-value=9.1e-06 Score=63.52 Aligned_cols=194 Identities=11% Similarity=0.185 Sum_probs=122.9
Q ss_pred CcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccC----CCe--EEEEecCCC--CCceEEEEcc--Cceeee
Q 036585 27 GIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSH----PTT--VIYSSKNGW--DESLRLLSLH--DNKYSR 96 (304)
Q Consensus 27 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--l~~~~~~~~--d~~i~vwd~~--~~~~~~ 96 (304)
..+++.....+-+.+||+ +++.++.+.. +.++.+..-|+ ++. ++.++.. . +++|.+|++. +++ +.
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R-~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNR-SEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEEC-STTCCEEEEEEECTTTCC-EE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCC-CCCCCeEEEEEECCCCCc-ee
Confidence 445666667788999999 7898888864 35666666552 222 4555542 2 4789999773 333 43
Q ss_pred eccc------cc-ccEEEEEE--cCC-CC-EEEEcccCCeEEEEeCCc-------ceeeceEEEeccceeEecCCCeEEE
Q 036585 97 YFKG------HH-DRVVLLSL--CSS-KD-CFISGSLDRTVLLWDQRA-------EKCQGLLRVQGRPAAAYDDQGLVFG 158 (304)
Q Consensus 97 ~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (304)
.+.. .. ..+..+++ +|. +. ++++...+|.+..|++.. .+.++.+..
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l---------------- 178 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM---------------- 178 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC----------------
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC----------------
Confidence 3321 11 45666777 664 43 677888889999998842 222333322
Q ss_pred ecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcC-----CCceeEEEEeCCCCCCcceEEEE--cCCCc
Q 036585 159 YEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF-----RGTLLSTYNVKPVSRNSTLEASF--SPEGM 231 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~-----~~~~~~~~~~~~~~~~~i~~~~~--s~~~~ 231 (304)
.+.+..+...+....|+++-++.-|..|+.+ +++.+..+.. ......+..|++ .++++
T Consensus 179 --------------gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~-g~l~aDvEGLai~~~~~g~ 243 (355)
T 3amr_A 179 --------------NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADG-RHLTRDIEGLTIYYAADGK 243 (355)
T ss_dssp --------------SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSS-SSBCSCEEEEEEEECGGGC
T ss_pred --------------CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecC-CccccCcceEEEEecCCCC
Confidence 2356778888888889999998778888855 2334333221 112245777877 45555
Q ss_pred -EEEEec-CCCcEEEEecC-CCceeeee
Q 036585 232 -FVISGS-GDGSVHAWSVR-SGKEVASW 256 (304)
Q Consensus 232 -~l~~~~-~dg~i~v~d~~-~~~~~~~~ 256 (304)
||++++ .++...+||.+ +.+.+..+
T Consensus 244 gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 244 GYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 666555 67789999996 56666666
No 282
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.69 E-value=5.4e-05 Score=66.64 Aligned_cols=215 Identities=11% Similarity=-0.012 Sum_probs=125.0
Q ss_pred EEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCc----eeeeeccccccc
Q 036585 29 YLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN----KYSRYFKGHHDR 104 (304)
Q Consensus 29 ~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~----~~~~~~~~~~~~ 104 (304)
+|+.+. ...|+..++...+....+. ....+..|+|.+....|+.+... .+.|+.+++... .....+......
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~--~~~I~~~~l~g~~~~~~~~~vi~~~l~~ 472 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQA 472 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETT--TTEEEEEEC--------CEEEECSSCSC
T ss_pred cccccc-ccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeecc--ceeEEEEeccCCCCCcceeEEEecCCCC
Confidence 444443 3458888877655443333 33467889999877777766543 778888888753 222223323345
Q ss_pred EEEEEEcCCCC-EEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEec
Q 036585 105 VVLLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSN 183 (304)
Q Consensus 105 v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 183 (304)
...|++.+.++ ++++-...+.|.+.++........+. ........|+++|
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~-----------------------------~~l~~P~gIaVDp 523 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-----------------------------ENGSKPRAIVVDP 523 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEE-----------------------------CTTCCEEEEEEET
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEe-----------------------------CCCCCcceEEEec
Confidence 56788887664 44454567789888887543222211 1223467899999
Q ss_pred CCcEEEEeeC--CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec-CCCcEEEEecCCCceeeeeecc-
Q 036585 184 DGRLMLLTTM--EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVHAWSVRSGKEVASWMSF- 259 (304)
Q Consensus 184 ~~~~l~~~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~- 259 (304)
.+..|+.+.. .+.|...++... ....+.. ..-.....|++++.+..|+.+. ..+.|...++........+...
T Consensus 524 ~~g~LYwtD~g~~~~I~~~~~dG~-~~~~lv~--~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~ 600 (791)
T 3m0c_C 524 VHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK 600 (791)
T ss_dssp TTTEEEEEECSSSCEEEEEETTSC-CEEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT
T ss_pred CCCCEEEecCCCCCeEEEEecCCC-ceEEEEe--CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCC
Confidence 7666666543 378999998643 3333331 2335678899998777777664 4567999998544333222221
Q ss_pred -CCCCceEEeCCCCcEEEEecCc
Q 036585 260 -DTEPPVIKWAPGSLMFVTGSSE 281 (304)
Q Consensus 260 -~~~i~~~~~~~~~~~l~s~~~d 281 (304)
-....+|++. +..|+.+...
T Consensus 601 ~l~~P~glav~--~~~lYwtD~~ 621 (791)
T 3m0c_C 601 RLAHPFSLAVF--EDKVFWTDII 621 (791)
T ss_dssp TTSSEEEEEEE--TTEEEEEETT
T ss_pred ccCCCCEEEEe--CCEEEEEECC
Confidence 1223456653 3345544444
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.61 E-value=0.00019 Score=63.17 Aligned_cols=204 Identities=8% Similarity=-0.016 Sum_probs=117.9
Q ss_pred eEeeccc-CcEEEEeeCCCeEEEEecCCc----ceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee
Q 036585 20 ILQSMEV-GIYLVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 94 (304)
Q Consensus 20 ~i~~~~~-~~~l~~~~~d~~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~ 94 (304)
.+.+.+. +.++++-...+.|+.+++... .....+.........|++.+.+..|+.+... .+.|.+.++.....
T Consensus 428 gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~--~~~I~v~~ldG~~~ 505 (791)
T 3m0c_C 428 ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKR 505 (791)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEETTSSSE
T ss_pred EEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecC--CCeEEEEeCCCCeE
Confidence 3445543 344445455677887777642 2222333233456789999888777777653 78999999876543
Q ss_pred eeecccccccEEEEEEcCCCCEEEEccc--CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCC
Q 036585 95 SRYFKGHHDRVVLLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGD 172 (304)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
...+.........|++.|....|+.+.. .+.|...++........+. ..
T Consensus 506 ~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~-----------------------------~~ 556 (791)
T 3m0c_C 506 KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT-----------------------------EN 556 (791)
T ss_dssp EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC-----------------------------SS
T ss_pred EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe-----------------------------CC
Confidence 3333333446789999997655555442 2567777765432221111 12
Q ss_pred CCCceEEEEecCCcEEEEe-eCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecCCC
Q 036585 173 ISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVRSG 250 (304)
Q Consensus 173 ~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~ 250 (304)
....+.|++++.+..|+.+ ...+.|..+++........... ...-.....|++. +.+|+.+ ...+.|...|..++
T Consensus 557 l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~-~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 557 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED-EKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC-TTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTC
T ss_pred CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecC-CCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCC
Confidence 2356789999776666665 4457899999865443333331 1122234456663 3345444 45677888887777
Q ss_pred ceeeeee
Q 036585 251 KEVASWM 257 (304)
Q Consensus 251 ~~~~~~~ 257 (304)
+.+..+.
T Consensus 634 ~~~~~l~ 640 (791)
T 3m0c_C 634 SDVNLLA 640 (791)
T ss_dssp CCCEEEE
T ss_pred cceEEee
Confidence 6655553
No 284
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.59 E-value=0.00011 Score=57.62 Aligned_cols=213 Identities=10% Similarity=0.023 Sum_probs=125.7
Q ss_pred eEeeccc-CcEEEEeeCCCeEEEEecCCcceee-eecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeee
Q 036585 20 ILQSMEV-GIYLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRY 97 (304)
Q Consensus 20 ~i~~~~~-~~~l~~~~~d~~i~vw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~ 97 (304)
.+.+.+. +.++.+-...+.|..++........ .+...-.....+++.+.+..|+.+... .+.|.++++........
T Consensus 39 ~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~--~~~I~~~~~dG~~~~~l 116 (318)
T 3sov_A 39 AVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE--TNRIEVSNLDGSLRKVL 116 (318)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEE
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECC--CCEEEEEECCCCcEEEE
Confidence 4566664 4455555567789889887653221 222222356788998866666665432 78999999875433222
Q ss_pred cccccccEEEEEEcCCCCEEEEcc--cCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCC
Q 036585 98 FKGHHDRVVLLSLCSSKDCFISGS--LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISD 175 (304)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
+.........+++.|.+..|+.+. ..+.|...++..... ..+. ......
T Consensus 117 ~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~----------------------------~~~l~~ 167 (318)
T 3sov_A 117 FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIII----------------------------NSEIYW 167 (318)
T ss_dssp ECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEE----------------------------CSSCSC
T ss_pred EeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEE----------------------------ECCCCC
Confidence 323345668899998665555554 246777777653221 1111 011134
Q ss_pred ceEEEEecCCcEEEEe-eCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceee
Q 036585 176 ANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVA 254 (304)
Q Consensus 176 v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~ 254 (304)
.+.++++|++..|+.+ +..+.|..+|+... ....+.. ........+++.. +..+.+-...+.|..++..+++...
T Consensus 168 Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~-~~~~~~~--~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~ 243 (318)
T 3sov_A 168 PNGLTLDYEEQKLYWADAKLNFIHKSNLDGT-NRQAVVK--GSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLR 243 (318)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEC--SCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCE
T ss_pred ccEEEEeccCCEEEEEECCCCEEEEEcCCCC-ceEEEec--CCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceE
Confidence 5789999976666655 45678999998643 3333331 2334556677753 3445555567889999987887665
Q ss_pred eeeccCCCCceEE
Q 036585 255 SWMSFDTEPPVIK 267 (304)
Q Consensus 255 ~~~~~~~~i~~~~ 267 (304)
.+......+.+++
T Consensus 244 ~i~~~~~~P~~i~ 256 (318)
T 3sov_A 244 EIHSDIFSPMDIH 256 (318)
T ss_dssp EEECCCSSCCCEE
T ss_pred EEeCCCCCCcEEE
Confidence 5543333334444
No 285
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.57 E-value=1.2e-06 Score=76.24 Aligned_cols=217 Identities=7% Similarity=-0.029 Sum_probs=119.0
Q ss_pred eEeecccCcEEEEe-eCCCeEEEEecCC----cceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee
Q 036585 20 ILQSMEVGIYLVTA-SDDESIRLYDVTA----ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 94 (304)
Q Consensus 20 ~i~~~~~~~~l~~~-~~d~~i~vw~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~ 94 (304)
.+.+.+.+..|+.+ ...+.|+.+++.+ ......+.........|++.+.+..|+.+... .+.|.++++.....
T Consensus 410 gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~--~~~I~v~d~dg~~~ 487 (699)
T 1n7d_A 410 ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVKR 487 (699)
T ss_dssp CCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTT--TSCEEEEBSSSCCE
T ss_pred EEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEecc--CCeEEEEecCCCce
Confidence 45555555555444 4557788888764 22222222222245678888666666655432 78899999876543
Q ss_pred eeecccccccEEEEEEcCCCCEEEEccc--CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCC
Q 036585 95 SRYFKGHHDRVVLLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGD 172 (304)
Q Consensus 95 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
...+.........+++.|.+.+|+.+.. .+.|..+++..... ..+. ...
T Consensus 488 ~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~----------------------------~~~ 538 (699)
T 1n7d_A 488 KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLV----------------------------TEN 538 (699)
T ss_dssp EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEES----------------------------CSS
T ss_pred EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEE----------------------------eCC
Confidence 3333322234567888886555544432 25666666543211 1110 011
Q ss_pred CCCceEEEEecCCcEEEEe-eCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCc
Q 036585 173 ISDANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGK 251 (304)
Q Consensus 173 ~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~ 251 (304)
....+.|+++|++..|+.+ ...+.|..+++.... ...+............+++..+ .++++....+.|..+|..+++
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEE
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCC
Confidence 2345679999876555554 456789999986433 3333211111223345666544 444455567889999988888
Q ss_pred eeeeeeccCCCCceEEeC
Q 036585 252 EVASWMSFDTEPPVIKWA 269 (304)
Q Consensus 252 ~~~~~~~~~~~i~~~~~~ 269 (304)
.+..+......+..|++.
T Consensus 617 ~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 617 DVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp EEECCCTTCSSCCCCCBC
T ss_pred ceEEeecCCCCCcEEEEe
Confidence 777664433334555443
No 286
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.55 E-value=5.1e-05 Score=59.38 Aligned_cols=187 Identities=12% Similarity=0.162 Sum_probs=113.8
Q ss_pred CCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCC----CC---EEEEcc-c--CCeEEEEeCC--ccee
Q 036585 69 PTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSS----KD---CFISGS-L--DRTVLLWDQR--AEKC 136 (304)
Q Consensus 69 ~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~-~--dg~i~iwd~~--~~~~ 136 (304)
...++.... .+-+.+||+ +++.++.+.. +.+..+...|+ ++ ++++.. . +.+|.+|++. ++.
T Consensus 40 ~s~ii~t~k---~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~- 112 (355)
T 3amr_A 40 NSKLITTNK---KSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT- 112 (355)
T ss_dssp GCEEEEEET---TTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-
T ss_pred ccEEEEEcC---CCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-
Confidence 344444444 789999999 7888887753 56667766653 22 223333 3 5789999763 332
Q ss_pred eceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEE--ecC-Cc-EEEEeeCCCeEEEEEcC-------CC
Q 036585 137 QGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKF--SND-GR-LMLLTTMEGHIHVLDSF-------RG 205 (304)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~~-~l~~~~~dg~i~~~d~~-------~~ 205 (304)
+..+.....+. ......+..+++ +|. ++ ++++...+|.+..|++. +.
T Consensus 113 l~~i~~~~~pv----------------------~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~ 170 (355)
T 3amr_A 113 LQSMTDPDHPI----------------------ATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISG 170 (355)
T ss_dssp EEECSCTTSCE----------------------ECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEE
T ss_pred eeeccccccCc----------------------CCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccc
Confidence 11110000000 001134555676 664 43 67888889999999882 34
Q ss_pred ceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecC-----CCceeeeee-c-cCCCCceEEe--CCCCc-EE
Q 036585 206 TLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVR-----SGKEVASWM-S-FDTEPPVIKW--APGSL-MF 275 (304)
Q Consensus 206 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~-----~~~~~~~~~-~-~~~~i~~~~~--~~~~~-~l 275 (304)
+.++++. ....+-.+...+....|+.+-++.-|..++.+ +++.+..+. + ....+..|+. .++++ +|
T Consensus 171 ~lVR~f~----lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyL 246 (355)
T 3amr_A 171 KKVRAFK----MNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYL 246 (355)
T ss_dssp EEEEEEE----CSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEE
T ss_pred eEEEEec----CCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEE
Confidence 5566666 34577888999988899999988777777754 233444432 2 2236778887 45555 66
Q ss_pred EEecCc---eEEeccC
Q 036585 276 VTGSSE---LSFWIPD 288 (304)
Q Consensus 276 ~s~~~d---~~iw~~~ 288 (304)
++++.. ..+|+.+
T Consensus 247 ivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 247 MASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEGGGTEEEEEESS
T ss_pred EEEcCCCCEEEEEECC
Confidence 655533 8888875
No 287
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.54 E-value=0.00011 Score=58.48 Aligned_cols=102 Identities=9% Similarity=0.021 Sum_probs=60.4
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcce--eeeec---ccccceeEEEEccC---CCeEEEEecCCCC---CceE
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAATC--LKTIN---SKKYGVDLVCFTSH---PTTVIYSSKNGWD---ESLR 85 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~~~~d---~~i~ 85 (304)
++..+.+.++|+++++ ..+|.|++++ +++. +..+. ........++++|+ +..|+++.....+ ..|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4567889999985555 5669999998 3332 22221 12346889999998 5566555431001 6788
Q ss_pred EEEccCce-----ee-eecc---cccccEEEEEEcCCCCEEEEcc
Q 036585 86 LLSLHDNK-----YS-RYFK---GHHDRVVLLSLCSSKDCFISGS 121 (304)
Q Consensus 86 vwd~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~ 121 (304)
.++...++ .+ ..+. ........++|.|+|.++++.+
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 88876431 11 1122 1111235789999997666643
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.50 E-value=3.5e-06 Score=73.39 Aligned_cols=201 Identities=11% Similarity=-0.004 Sum_probs=114.0
Q ss_pred CCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC----ceeeeecccccccEEEEEEc
Q 036585 36 DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD----NKYSRYFKGHHDRVVLLSLC 111 (304)
Q Consensus 36 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~----~~~~~~~~~~~~~v~~~~~~ 111 (304)
...|++.++.+.+....+... ..+..++|.+....|+.+... .+.|+.+++.. ......+.........+++.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~-~~p~gla~d~~~~~Ly~sD~~--~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNL-RNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCC-TTCCCCEEETTTTEEEECCTT--TTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred ccceEEEeCCCCcceeeeccC-cceEEEccccccCeEEEEecC--CCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 356888888766554444332 356789999988888777653 78999999875 22222222112234567777
Q ss_pred CC-CCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEE
Q 036585 112 SS-KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLL 190 (304)
Q Consensus 112 ~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 190 (304)
+. ++++++-...+.|.++++........+. ........++++|.+.+|+.
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~-----------------------------~~~~~P~giavDp~~g~ly~ 512 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFR-----------------------------EQGSKPRAIVVDPVHGFMYW 512 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEECC-----------------------------CSSCCCCCEECCSSSSCCEE
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEEEe-----------------------------CCCCCcceEEEccCCCcEEE
Confidence 54 4445554556788888876543221111 11134567889887665555
Q ss_pred eeC--CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecCCCceeeeee--ccCCCCce
Q 036585 191 TTM--EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVRSGKEVASWM--SFDTEPPV 265 (304)
Q Consensus 191 ~~~--dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~--~~~~~i~~ 265 (304)
+.. .+.|..+++... ....+.. ..-.....|+|+|++..|+.+ ...+.|.++++........+. ........
T Consensus 513 td~~~~~~I~~~~~dG~-~~~~l~~--~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~g 589 (699)
T 1n7d_A 513 TDWGTPAKIKKGGLNGV-DIYSLVT--ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFS 589 (699)
T ss_dssp CCCSSSCCEEBCCSSSC-CCCEESC--SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCC
T ss_pred cccCCCCeEEEEeCCCC-CeeEEEe--CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceE
Confidence 443 368888887532 2222211 123456679999976665555 456789999986433222221 11233456
Q ss_pred EEeCCC
Q 036585 266 IKWAPG 271 (304)
Q Consensus 266 ~~~~~~ 271 (304)
|++..+
T Consensus 590 lavd~~ 595 (699)
T 1n7d_A 590 LAVFED 595 (699)
T ss_dssp CEEETT
T ss_pred eEEECC
Confidence 666554
No 289
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.48 E-value=0.00015 Score=59.44 Aligned_cols=197 Identities=10% Similarity=0.119 Sum_probs=115.0
Q ss_pred ceeEEEEccC--CCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccC---C-eEEEEeCC
Q 036585 59 GVDLVCFTSH--PTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLD---R-TVLLWDQR 132 (304)
Q Consensus 59 ~v~~~~~~~~--~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g-~i~iwd~~ 132 (304)
....++|.|+ ...|+.+.. .+.|+.+|..+++...... .......++++++++++++-... . .+...+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~---~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQ---RDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECB---TSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCCCEEEEEeC---CCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 4568999984 556777664 4899999998776554433 44568899999999944443311 1 12222221
Q ss_pred cceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEec-CCcEEEEeeCCCeEEEEEcCCCceeEEE
Q 036585 133 AEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTY 211 (304)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 211 (304)
.. ....... ........++++| +|.++++-..++.|+.+|..++.....+
T Consensus 216 ~~-~~~~~~~----------------------------~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~ 266 (433)
T 4hw6_A 216 SG-FTERLSL----------------------------CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEE 266 (433)
T ss_dssp GT-TCCEEEE----------------------------EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEE
T ss_pred CC-eeccccc----------------------------cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEE
Confidence 11 1000000 0113446688999 6766556667789999998877763333
Q ss_pred EeCCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecC--CCce--eeeeecc---------------CCCCceEEe---
Q 036585 212 NVKPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVR--SGKE--VASWMSF---------------DTEPPVIKW--- 268 (304)
Q Consensus 212 ~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~--~~~~--~~~~~~~---------------~~~i~~~~~--- 268 (304)
... ........++|+|++++|+.+ ...+.|+.+++. ++.. ...+.+. -.....+++
T Consensus 267 ~~~-~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n 345 (433)
T 4hw6_A 267 VMM-DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKN 345 (433)
T ss_dssp EEC-SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEEC
T ss_pred ecc-CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEcc
Confidence 221 122233469999999966555 456789998865 2321 1122111 123567899
Q ss_pred ------CCCCcEEEEecCc--eEEeccCC
Q 036585 269 ------APGSLMFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 269 ------~~~~~~l~s~~~d--~~iw~~~~ 289 (304)
.+++.+.++-... |+.++.+.
T Consensus 346 ~~y~~dd~~g~lyvaD~~n~~I~~~~~~G 374 (433)
T 4hw6_A 346 EAYAGEEDEYDFYFCDRDSHTVRVLTPEG 374 (433)
T ss_dssp GGGTTSSCCEEEEEEETTTTEEEEECTTS
T ss_pred ccccccCCCCcEEEEECCCCEEEEECCCC
Confidence 6777666655444 66666543
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.48 E-value=0.00028 Score=60.59 Aligned_cols=210 Identities=9% Similarity=-0.022 Sum_probs=118.2
Q ss_pred CCeEEEEecCCcc-eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee-eeecccccccEEEEEEcCC
Q 036585 36 DESIRLYDVTAAT-CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-SRYFKGHHDRVVLLSLCSS 113 (304)
Q Consensus 36 d~~i~vw~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~ 113 (304)
...|+..++.... ....+......+..++|++.+..|+.+... .+.|..+++..... ...+.........+++.+.
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~--~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~ 94 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS--EEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 94 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETT--TTEEEEEEC-----CEEEECSSCSCEEEEEEETT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECC--CCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec
Confidence 4568888887543 222222233457889999988887777653 77888888876532 2223322346788999985
Q ss_pred CC-EEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEee
Q 036585 114 KD-CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTT 192 (304)
Q Consensus 114 ~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 192 (304)
+. ++++-...+.|.+.++.......... ........|++.|.+..|+.+.
T Consensus 95 ~~~ly~~d~~~~~I~v~~~dG~~~~~l~~-----------------------------~~l~~P~~Iavdp~~g~ly~tD 145 (619)
T 3s94_A 95 GEKLYWTDSETNRIEVSNLDGSLRKVLFW-----------------------------QELDQPRAIALDPSSGFMYWTD 145 (619)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEEC-----------------------------SSCSCCCCEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEECCCCCEEEEEe-----------------------------CCCCCCceEEEecCCCeEEEec
Confidence 55 44555567889999887543221111 1223467799999766566554
Q ss_pred C--CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecCCCceeeeeeccCCCCceEEeC
Q 036585 193 M--EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWA 269 (304)
Q Consensus 193 ~--dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 269 (304)
. .+.|...++.. .....+.. ..-.....++++++++.|+.+ ...+.|..+|+..........+......+|++.
T Consensus 146 ~g~~~~I~r~~~dG-~~~~~l~~--~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~ 222 (619)
T 3s94_A 146 WGEVPKIERAGMDG-SSRFIIIN--SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF 222 (619)
T ss_dssp CSSSCEEEEEETTS-CSCEEEEC--SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEES
T ss_pred cCCCCEEEEEECCC-CceEEEEe--CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEe
Confidence 3 46788788653 33333331 234467889999977666666 456789999986543322222222334677776
Q ss_pred CCCcEEEEecCc
Q 036585 270 PGSLMFVTGSSE 281 (304)
Q Consensus 270 ~~~~~l~s~~~d 281 (304)
.+ .|+.+...
T Consensus 223 ~~--~ly~td~~ 232 (619)
T 3s94_A 223 ED--ILYWTDWS 232 (619)
T ss_dssp SS--EEEEECTT
T ss_pred CC--EEEEecCC
Confidence 55 44444433
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.47 E-value=0.00036 Score=57.70 Aligned_cols=253 Identities=9% Similarity=0.051 Sum_probs=135.0
Q ss_pred eeeEeecc-c-CcEEEEeeCCCeEEEEecCCcceeeeeccc---ccceeEEEE-------ccCCCeEEEEecCCC----C
Q 036585 18 EEILQSME-V-GIYLVTASDDESIRLYDVTAATCLKTINSK---KYGVDLVCF-------TSHPTTVIYSSKNGW----D 81 (304)
Q Consensus 18 ~~~i~~~~-~-~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~~~~----d 81 (304)
+..+.+.| + ++++++-...+.|++.|.+++.....+... ......++| ++++..|+++...+. .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 45677887 3 444444444567999998876665444332 235789999 999997887775210 1
Q ss_pred CceEEEEccC-ceee-----eecccccccEEEEEEcC-CCCEEEEcccCCeEEEEeCC-------cceeeceEEEeccce
Q 036585 82 ESLRLLSLHD-NKYS-----RYFKGHHDRVVLLSLCS-SKDCFISGSLDRTVLLWDQR-------AEKCQGLLRVQGRPA 147 (304)
Q Consensus 82 ~~i~vwd~~~-~~~~-----~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~ 147 (304)
..|.+++... ++.. ..+... .....++++| ++.++++-..++.|..+|+. ++...........
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~-- 297 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP-- 297 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT--
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc--
Confidence 1355665433 2221 122211 2335678899 45556666678889999987 3432000000000
Q ss_pred eEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEe-eCCCeEEEEEcC--CCcee--EEEEeCCCCC----
Q 036585 148 AAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLT-TMEGHIHVLDSF--RGTLL--STYNVKPVSR---- 218 (304)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~--~~~~~--~~~~~~~~~~---- 218 (304)
+ ..-.++.+ ........++|+|+|+.|+++ +....|+.++.. .+... ..+....+..
T Consensus 298 ------g-------~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~D 363 (496)
T 3kya_A 298 ------N-------TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRD 363 (496)
T ss_dssp ------T-------TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBC
T ss_pred ------c-------ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccC
Confidence 0 00000111 122345789999999965555 456788886653 33221 2232210000
Q ss_pred --------Ccce-EEEEc-------CCCcEEEEecCCCcEEEEecCCCceeeeeecc-----------------------
Q 036585 219 --------NSTL-EASFS-------PEGMFVISGSGDGSVHAWSVRSGKEVASWMSF----------------------- 259 (304)
Q Consensus 219 --------~~i~-~~~~s-------~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~----------------------- 259 (304)
.... .++.. +++.++++=..++.|+.++ .++. +.++-+.
T Consensus 364 G~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a 441 (496)
T 3kya_A 364 DVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVA 441 (496)
T ss_dssp CBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTC
T ss_pred CcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhh
Confidence 1223 34554 4566666666778899998 4553 3333221
Q ss_pred -CCCCceEEeCCC-CcEEEEecCc--eEEeccCC
Q 036585 260 -DTEPPVIKWAPG-SLMFVTGSSE--LSFWIPDL 289 (304)
Q Consensus 260 -~~~i~~~~~~~~-~~~l~s~~~d--~~iw~~~~ 289 (304)
-.....|+++++ +.++++=..+ |+.++++.
T Consensus 442 ~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 442 RFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred hcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCC
Confidence 023568999997 5544443333 55555544
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.44 E-value=0.00031 Score=55.36 Aligned_cols=228 Identities=10% Similarity=0.041 Sum_probs=119.2
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceeeeec---ccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee-e
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTIN---SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY-S 95 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~-~ 95 (304)
.+.+.+ +..++ ++..+.|.. ..+.++.-..+. .+...+..+.+.+++..++++. ++.|.. ....++. .
T Consensus 84 ~i~~~~-~~~~~-~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~g~v~~-S~DgG~tW~ 155 (327)
T 2xbg_A 84 SVSFQG-NEGWI-VGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN----VGAIYR-TKDSGKNWQ 155 (327)
T ss_dssp EEEEET-TEEEE-EEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET----TCCEEE-ESSTTSSEE
T ss_pred EEEecC-CeEEE-EECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC----CccEEE-EcCCCCCCE
Confidence 344443 44444 455664443 223333322222 1234567787777666555543 554422 1222321 1
Q ss_pred eecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCC
Q 036585 96 RYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISD 175 (304)
Q Consensus 96 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (304)
.........+..+.+.|++.+++.+...+..+-.|-. +..-..+.. .....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~tW~~~~~----------------------------~~~~~ 206 (327)
T 2xbg_A 156 ALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTAWEPHNR----------------------------TTSRR 206 (327)
T ss_dssp EEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSSCEEEEC----------------------------CSSSC
T ss_pred EeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCceeECCC----------------------------CCCCc
Confidence 1222345578899999988877776554444444421 111111110 12245
Q ss_pred ceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeC-CCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceee
Q 036585 176 ANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK-PVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVA 254 (304)
Q Consensus 176 v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~ 254 (304)
+..+.+.+++..+ +.+.+|.+++.+...++.-..+... ......+..+.+.+++..++++. +|.| .+....++.-.
T Consensus 207 ~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~ 283 (327)
T 2xbg_A 207 LHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQ 283 (327)
T ss_dssp EEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCE
T ss_pred cceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccE
Confidence 6778888888755 4556788777643323332222211 01223578899998887777665 6666 34445555444
Q ss_pred eee---ccCCCCceEEeCCCCcEEEEecCceEEeccC
Q 036585 255 SWM---SFDTEPPVIKWAPGSLMFVTGSSELSFWIPD 288 (304)
Q Consensus 255 ~~~---~~~~~i~~~~~~~~~~~l~s~~~d~~iw~~~ 288 (304)
.+. .....+.++.|.+++..++.+ .+..|+.++
T Consensus 284 ~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~G~i~~~~ 319 (327)
T 2xbg_A 284 QDVDVKKVPSNFYKILFFSPDQGFILG-QKGILLRYV 319 (327)
T ss_dssp ECGGGTTSSSCCCEEEEEETTEEEEEC-STTEEEEEC
T ss_pred EcCccCCCCCCeEEEEEECCCceEEEc-CCceEEEEc
Confidence 443 234578899998666655544 454555544
No 293
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.42 E-value=5.1e-05 Score=65.87 Aligned_cols=228 Identities=11% Similarity=0.062 Sum_probs=123.5
Q ss_pred EEEEcc-CCCeEEEEecCCC--------CCceEEEEccCceeee--ecc-cccccEEEEEEcCCCCEEEEccc-CCeEEE
Q 036585 62 LVCFTS-HPTTVIYSSKNGW--------DESLRLLSLHDNKYSR--YFK-GHHDRVVLLSLCSSKDCFISGSL-DRTVLL 128 (304)
Q Consensus 62 ~~~~~~-~~~~l~~~~~~~~--------d~~i~vwd~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i 128 (304)
..++.+ +++.++.|+.... ...+.+||..+++... .+. .+.....++++.+++++++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 567777 7888888775210 1158899998876332 221 12222335677789999999884 458999
Q ss_pred EeCCcceeeceEEEecc---ceeEecCCCeEEEecC--------CCeEEEEecCCCCCceE---------------EEEe
Q 036585 129 WDQRAEKCQGLLRVQGR---PAAAYDDQGLVFGYEK--------GPLDIFSVGGDISDANV---------------VKFS 182 (304)
Q Consensus 129 wd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~v~~---------------~~~~ 182 (304)
||..+.+....-..... .....-+++.++.... ..+.+|+..... -.. ..+.
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~--W~~~~~~~~~p~~~~~~~~~~~ 347 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT--WTSLPNAKVNPMLTADKQGLYR 347 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE--EEEETTSCSGGGCCCCTTGGGT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc--ceeCCCccccccccccccceee
Confidence 99987754433221111 1233333444432221 345555543211 000 0112
Q ss_pred cCCcEEEEeeCCC---------eEEEEEcCCCceeEEEEeCCC------CCCcceEEEEcC-CCcEEEEecCCC------
Q 036585 183 NDGRLMLLTTMEG---------HIHVLDSFRGTLLSTYNVKPV------SRNSTLEASFSP-EGMFVISGSGDG------ 240 (304)
Q Consensus 183 ~~~~~l~~~~~dg---------~i~~~d~~~~~~~~~~~~~~~------~~~~i~~~~~s~-~~~~l~~~~~dg------ 240 (304)
.++..++.++.+| .+..||..+............ ....-.++.|.. ++++++.|+.++
T Consensus 348 ~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~ 427 (656)
T 1k3i_A 348 SDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDA 427 (656)
T ss_dssp TTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBC
T ss_pred cCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCc
Confidence 3445555554443 567888877765443332111 111233444543 778888887532
Q ss_pred -----cEEEEecCCCceeeee--eccCCC-CceEEeCCCCcEEEEecCc-------------eEEeccCCcc
Q 036585 241 -----SVHAWSVRSGKEVASW--MSFDTE-PPVIKWAPGSLMFVTGSSE-------------LSFWIPDLSK 291 (304)
Q Consensus 241 -----~i~v~d~~~~~~~~~~--~~~~~~-i~~~~~~~~~~~l~s~~~d-------------~~iw~~~~~~ 291 (304)
.|.+||..+.+-.... ..+... -.+++..|++++++.|+.+ +.+|+.+.++
T Consensus 428 ~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 428 TTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp CCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 5788888765533221 112222 2455677899999998732 6778776544
No 294
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.41 E-value=6.8e-05 Score=61.49 Aligned_cols=155 Identities=10% Similarity=0.151 Sum_probs=98.5
Q ss_pred ceeEEEEcc-CCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCCEEEEcccC-C----eEEEEeCC
Q 036585 59 GVDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSLD-R----TVLLWDQR 132 (304)
Q Consensus 59 ~v~~~~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g----~i~iwd~~ 132 (304)
....++++| ++..|+++.. .+.|+.+|+.+++...... .......++|++++++|+.+... + .+...+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~---~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGE---QHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEB---TEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-
T ss_pred CCCEEEECCCCCCeEEEEeC---CCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-
Confidence 356889998 5667777765 4889999988766443333 44567899999999966655432 1 2333332
Q ss_pred cceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEec-CCcEEEEeeCCCeEEEEEcCCCceeEEE
Q 036585 133 AEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSN-DGRLMLLTTMEGHIHVLDSFRGTLLSTY 211 (304)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~ 211 (304)
.+......... .......++++| +|.++++-..++.|+.++...+......
T Consensus 213 ~g~~~~~~~l~----------------------------~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~ 264 (430)
T 3tc9_A 213 ESGFKVITELT----------------------------KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF 264 (430)
T ss_dssp GGTSCSEEEEE----------------------------ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceeeeeeec----------------------------cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 22221110000 112456788999 6776666667789999998876543333
Q ss_pred EeCCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecC
Q 036585 212 NVKPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVR 248 (304)
Q Consensus 212 ~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~ 248 (304)
.. ........++|+|++++|+.+ ...+.|..++..
T Consensus 265 ~~--~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 265 TI--QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EC--SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred Ec--CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 32 122456789999999965555 467789998865
No 295
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.40 E-value=0.00034 Score=53.93 Aligned_cols=225 Identities=15% Similarity=0.195 Sum_probs=139.5
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC-ceee
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYS 95 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~-~~~~ 95 (304)
..+..-..|..+.||.-. ..++.++|+++.+.+......+ +|.-=.|-. .+.|+..+ +..|+-|+++. ..+.
T Consensus 68 ~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis-~~~L~lVT----~taVyHWs~~~~s~P~ 140 (365)
T 2xzh_A 68 SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWIS-LNTVALVT----DNAVYHWSMEGESQPV 140 (365)
T ss_dssp CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECS-SSEEEEEE----SSEEEEEESSTTCCCE
T ss_pred ccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecC-CCeEEEEc----CCcEEEEcccCCCCCc
Confidence 333444567778888776 5789999999988887776544 676667764 44555555 77999999975 3455
Q ss_pred eeccccc----ccEEEEEEcCCCCEEEEcc-------cCCeEEEEeCCcceeeceEEEeccceeEecCC-----CeEEEe
Q 036585 96 RYFKGHH----DRVVLLSLCSSKDCFISGS-------LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQ-----GLVFGY 159 (304)
Q Consensus 96 ~~~~~~~----~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 159 (304)
+.+..|. ..|.....+++.++++..+ -.|.+.+|..+.+.... +..+......+..+ ..++.+
T Consensus 141 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~-ieGhaa~F~~~~~~g~~~~~~lf~f 219 (365)
T 2xzh_A 141 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAASFAQFKMEGNAEESTLFCF 219 (365)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE-ECCSEEEEEEECCTTCSSCEEEEEE
T ss_pred eeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccce-eeeeeeeeEEEecCCCCCCceEEEE
Confidence 5555443 4678888888988766543 24778899887654322 11111111111111 112211
Q ss_pred c-----CCCeEEEEecCC---------------------CCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEe
Q 036585 160 E-----KGPLDIFSVGGD---------------------ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV 213 (304)
Q Consensus 160 ~-----~~~~~~~~~~~~---------------------~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 213 (304)
. .+.+.+.++... .+-.-++..++.-..++.-+.-|.|++||+.++.++..-+
T Consensus 220 a~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nr- 298 (365)
T 2xzh_A 220 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR- 298 (365)
T ss_dssp EEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred EEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEec-
Confidence 1 124445544221 1222345566666778888999999999999999998877
Q ss_pred CCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCce
Q 036585 214 KPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKE 252 (304)
Q Consensus 214 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~ 252 (304)
.....|...+-+....-++.....|.|.--.+.....
T Consensus 299 --IS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 299 --ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp --CCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred --cCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 3556666555555444555555777776666655443
No 296
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.39 E-value=7.2e-05 Score=57.98 Aligned_cols=175 Identities=13% Similarity=0.095 Sum_probs=111.6
Q ss_pred cccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee-ecccc------cccEEEEEE---cCCCCEEEEcc----
Q 036585 56 KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR-YFKGH------HDRVVLLSL---CSSKDCFISGS---- 121 (304)
Q Consensus 56 ~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~-~~~~~------~~~v~~~~~---~~~~~~l~~~~---- 121 (304)
...-..+++|.+....++.++.- .++|..|+...+.... .+..- ...+..+.| .|+++++++..
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~--~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLY--KGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETT--TTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred cccCCcCccCcCCCCEEEEEecc--CCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence 33445678998877777777642 8999999997654322 23221 124689999 58877776533
Q ss_pred ---------cCCeEEEEeCC---cceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecC-CCCCceEEEEecCCcEE
Q 036585 122 ---------LDRTVLLWDQR---AEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGG-DISDANVVKFSNDGRLM 188 (304)
Q Consensus 122 ---------~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 188 (304)
.+..+..||+. +++............- +. ...+ .......++..++|+..
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~-~~----------------~~~g~~~~~~nDvavD~~GnaY 151 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDE-FE----------------KKAGKRPFGVVQSAQDRDGNSY 151 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHH-HH----------------HHHSSCCEEEEEEEECTTSCEE
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccc-cc----------------ccccccccCCceeEECCCCCEE
Confidence 25779999998 7766655443211000 00 0000 11236789999999988
Q ss_pred EEeeCC-CeEEEEEcCCCceeEEEEeCC---CCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCC
Q 036585 189 LLTTME-GHIHVLDSFRGTLLSTYNVKP---VSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSG 250 (304)
Q Consensus 189 ~~~~~d-g~i~~~d~~~~~~~~~~~~~~---~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~ 250 (304)
++++.. +.|..++... +....+.... ......+.++++|+|+.|++....|.+..+|+++.
T Consensus 152 Vt~s~~~~~I~rV~pdG-~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 152 VAFALGMPAIARVSADG-KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEESSCEEEEECTTS-CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred EeCCCCCCeEEEEeCCC-CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 888888 8888888643 3333332111 12234678999999998888877999999998743
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.38 E-value=0.00034 Score=54.33 Aligned_cols=228 Identities=15% Similarity=0.180 Sum_probs=113.2
Q ss_pred ccCcEEEEee-CC-----CeEEEEecCCcceee--eecccccceeEEEEccCCCeEEEEecCC--CCCceEEEEccCce-
Q 036585 25 EVGIYLVTAS-DD-----ESIRLYDVTAATCLK--TINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDNK- 93 (304)
Q Consensus 25 ~~~~~l~~~~-~d-----~~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~vwd~~~~~- 93 (304)
.++.+++.|+ .+ ..+.+||..+.+-.. .+....... ++ ...++..++.|+..+ ....+.+||+.+++
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~-~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYV-AS-VSLHDRIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSC-EE-EEETTEEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccc-cE-EEECCEEEEEcCCCCCccCceEEEEECCCCCC
Confidence 3456777777 33 368889987664322 122111111 22 223566677776421 12468899988765
Q ss_pred --eee--ecccccccEEEEEEcCCCCEEEEcccC-----CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCe
Q 036585 94 --YSR--YFKGHHDRVVLLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPL 164 (304)
Q Consensus 94 --~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (304)
-.. .+........++.+ ++..++.|+.+ ..+.+||+.+.+....-..+.
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-------------------- 148 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQT-------------------- 148 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSS--------------------
T ss_pred CeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCC--------------------
Confidence 222 12111111122222 56677777643 357888887765433211110
Q ss_pred EEEEecCCCCCceEEEEecCCcEEEEeeCC-----CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC
Q 036585 165 DIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD 239 (304)
Q Consensus 165 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 239 (304)
.......+. -+++.++.|+.+ ..+.+||+.+.+....-.. +........+. .++++++.|+.+
T Consensus 149 -------~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~~~~~~~--~~~~i~v~GG~~ 216 (301)
T 2vpj_A 149 -------AREGAGLVV--ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM-ATKRSGAGVAL--LNDHIYVVGGFD 216 (301)
T ss_dssp -------CCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCC-SSCCBSCEEEE--ETTEEEEECCBC
T ss_pred -------CcccceEEE--ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCC-CcccccceEEE--ECCEEEEEeCCC
Confidence 001111122 267777777654 4689999888765443211 11112222222 266777777654
Q ss_pred -----CcEEEEecCCCcee--eeeeccCCCCceEEeCCCCcEEEEecCc-------eEEeccCCc
Q 036585 240 -----GSVHAWSVRSGKEV--ASWMSFDTEPPVIKWAPGSLMFVTGSSE-------LSFWIPDLS 290 (304)
Q Consensus 240 -----g~i~v~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~s~~~d-------~~iw~~~~~ 290 (304)
..+.+||+.+.+-. ..+.........+. -++++++.|+.+ +.+|+++.+
T Consensus 217 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 217 GTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred CCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 46899999775432 22211111112222 266777777643 455665544
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.35 E-value=0.00099 Score=57.32 Aligned_cols=205 Identities=7% Similarity=-0.030 Sum_probs=126.1
Q ss_pred EEEEeeCCCeEEEEecCCcceeeeecc-cccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEE
Q 036585 29 YLVTASDDESIRLYDVTAATCLKTINS-KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVL 107 (304)
Q Consensus 29 ~l~~~~~d~~i~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~ 107 (304)
+|+.+ ....|+..++++.+....+.. .-..+..++|.+....|+.+... ++.|..+++........+.........
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~--~~~I~r~~~~g~~~~~v~~~g~~~P~G 84 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDIS--LKTISRAFMNGSALEHVVEFGLDYPEG 84 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCSCCCE
T ss_pred EEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECC--CCeEEEEECCCCCcEEEEeCCCCCcce
Confidence 45544 456799999986554333321 22467899999988887777653 789999988765433333322234567
Q ss_pred EEEcCCCC-EEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCc
Q 036585 108 LSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGR 186 (304)
Q Consensus 108 ~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 186 (304)
+++.+.+. ++++-...+.|.+.++.......... ........++++|...
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~-----------------------------~~l~~P~~iavdp~~G 135 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW-----------------------------KDLDSPRALALDPAEG 135 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC-----------------------------SSCCCEEEEEEETTTT
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe-----------------------------CCCCCcccEEEccCCC
Confidence 88876544 44444556788888876432211110 1223457899998655
Q ss_pred EEEEee--CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec-CCCcEEEEecCCCceeeeeeccCCCC
Q 036585 187 LMLLTT--MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVHAWSVRSGKEVASWMSFDTEP 263 (304)
Q Consensus 187 ~l~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~v~d~~~~~~~~~~~~~~~~i 263 (304)
.|+.+. ..+.|...++..... ..+. ..-.....++++++++.|+.+. ..+.|..+|+..... ..+.......
T Consensus 136 ~lY~tD~g~~~~I~r~~~dG~~~-~~l~---~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P 210 (628)
T 4a0p_A 136 FMYWTEWGGKPKIDRAAMDGSER-TTLV---PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHP 210 (628)
T ss_dssp EEEEEECSSSCEEEEEETTSCSC-EEEE---CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCE
T ss_pred eEEEeCCCCCCEEEEEeCCCCce-EEEE---CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCc
Confidence 566554 257888888764443 3333 2345678899999877776664 567899999865433 3333333445
Q ss_pred ceEEeCC
Q 036585 264 PVIKWAP 270 (304)
Q Consensus 264 ~~~~~~~ 270 (304)
..+++..
T Consensus 211 ~glav~~ 217 (628)
T 4a0p_A 211 FGLTQYQ 217 (628)
T ss_dssp EEEEEET
T ss_pred eEEEEEC
Confidence 6777755
No 299
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.28 E-value=0.00035 Score=55.33 Aligned_cols=196 Identities=12% Similarity=0.201 Sum_probs=110.3
Q ss_pred ceeeEeecccCcEEEEee------------CCCeEEEEecCCcc-eeeeec--c-----cccceeEEEEcc--CCC-eEE
Q 036585 17 SEEILQSMEVGIYLVTAS------------DDESIRLYDVTAAT-CLKTIN--S-----KKYGVDLVCFTS--HPT-TVI 73 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~------------~d~~i~vw~~~~~~-~~~~~~--~-----~~~~v~~~~~~~--~~~-~l~ 73 (304)
..+-+...++|..+++++ .+|.|.++|.++.. ....+. + .......+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 344455677776655552 68999999987321 112222 2 223566777766 344 455
Q ss_pred EEecCCCCCceEEEEccCce----eeeecccc-cccEEEEEEcCCCCEEEEccc-----------------CCeEEEEeC
Q 036585 74 YSSKNGWDESLRLLSLHDNK----YSRYFKGH-HDRVVLLSLCSSKDCFISGSL-----------------DRTVLLWDQ 131 (304)
Q Consensus 74 ~~~~~~~d~~i~vwd~~~~~----~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~-----------------dg~i~iwd~ 131 (304)
++.....+.+|.+|++.... .+..+.+. -.....+.+.++|.+.++... .|.+..+|.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 55432225688888776532 22233321 235678888888876665431 133333332
Q ss_pred CcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEee-CCCeEEEEEcCC-CceeE
Q 036585 132 RAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTT-MEGHIHVLDSFR-GTLLS 209 (304)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~-~~~~~ 209 (304)
. +.. .+ ...-...+.++|+||++.|+++. ..+.|+.|++.. ++...
T Consensus 211 ~--~~~-~~-----------------------------~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~ 258 (355)
T 3sre_A 211 N--DVR-VV-----------------------------AEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTP 258 (355)
T ss_dssp T--CCE-EE-----------------------------EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEE
T ss_pred C--eEE-Ee-----------------------------ecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEec
Confidence 1 111 00 01123467899999998887765 578999999863 33322
Q ss_pred --EEEeCCCCCCcceEEEEcC-CCcEEEEecCC-CcEEEEecC
Q 036585 210 --TYNVKPVSRNSTLEASFSP-EGMFVISGSGD-GSVHAWSVR 248 (304)
Q Consensus 210 --~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~d-g~i~v~d~~ 248 (304)
.+. .....-.+++++ +|++.+++..+ +.|..|+..
T Consensus 259 ~~~~~----~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 259 LRVLS----FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEE----CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred CEEEe----CCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 232 245667789999 59877766534 344444543
No 300
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.25 E-value=0.001 Score=53.41 Aligned_cols=226 Identities=15% Similarity=0.198 Sum_probs=142.2
Q ss_pred cceeeEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC-cee
Q 036585 16 LSEEILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKY 94 (304)
Q Consensus 16 ~~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~-~~~ 94 (304)
...+..-..|..+.||.-. ..++.|+|+++.+.+....... +|.-=.|-. .+.|+..+ +..|+-|++.. ..+
T Consensus 66 i~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis-~~~l~lVT----~taVyHWsi~~~s~P 138 (494)
T 1bpo_A 66 ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWIS-LNTVALVT----DNAVYHWSMEGESQP 138 (494)
T ss_dssp CCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEE-TTEEEEEC----SSEEEEEESSSSCCC
T ss_pred cccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecC-CCeEEEEc----CCeeEEecccCCCCc
Confidence 3334444566777888776 5789999999988887776554 566666764 44566665 77999999975 345
Q ss_pred eeeccccc----ccEEEEEEcCCCCEEEEcc-------cCCeEEEEeCCcceeeceEEEeccceeEecCC-----CeEEE
Q 036585 95 SRYFKGHH----DRVVLLSLCSSKDCFISGS-------LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQ-----GLVFG 158 (304)
Q Consensus 95 ~~~~~~~~----~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 158 (304)
++.+..|. ..|.....+++.++++..+ -.|.+.+|..+.+.... +..+......+..+ ..++.
T Consensus 139 ~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~-ieGhaa~F~~~~~~g~~~~~~lf~ 217 (494)
T 1bpo_A 139 VKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAASFAQFKMEGNAEESTLFC 217 (494)
T ss_dssp EEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEE-ECCSEEEEEEEECTTCSSEEEEEE
T ss_pred hhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccch-heeeeeeeEEEecCCCCCCceEEE
Confidence 56665443 4788888889999876543 34788899887654321 11111111111101 01111
Q ss_pred ec-----CCCeEEEEecCC---------------------CCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEE
Q 036585 159 YE-----KGPLDIFSVGGD---------------------ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYN 212 (304)
Q Consensus 159 ~~-----~~~~~~~~~~~~---------------------~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 212 (304)
+. .+.+.+.++... .+-..++..++.-..++.-+.-|.|++||+.++.++..-+
T Consensus 218 fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 218 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp EEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 11 134444444321 1223456677777788888999999999999999998877
Q ss_pred eCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCce
Q 036585 213 VKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKE 252 (304)
Q Consensus 213 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~ 252 (304)
.....|...+.+....-++.....|.|.--.+.....
T Consensus 298 ---Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 298 ---ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp ---CCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred ---ccCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 4556666666655555566666788777666655443
No 301
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.24 E-value=0.00022 Score=57.10 Aligned_cols=158 Identities=15% Similarity=0.192 Sum_probs=102.7
Q ss_pred eeEeecccCcEEEEeeCCCeEEEEecCCcceeeeeccc----ccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee
Q 036585 19 EILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSK----KYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY 94 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~ 94 (304)
.......+|..++.+- ++.||.-++......+.+... -..+..+..+|+|++|+..+ +..|.|..+..+..
T Consensus 24 R~~~~~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g----~~~V~Vv~LP~~~~ 98 (452)
T 3pbp_A 24 RYIFSSQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN----DNEIFVMEVPWGYS 98 (452)
T ss_dssp EEEEEETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC----SSEEEEEECCTTCS
T ss_pred cEEEEEcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec----CCeEEEEEecCccc
Confidence 3344445566666654 467888787754444444433 23688899999999999998 78999998873310
Q ss_pred ------------eeeccc------ccccEEEEEEcC---CCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCC
Q 036585 95 ------------SRYFKG------HHDRVVLLSLCS---SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQ 153 (304)
Q Consensus 95 ------------~~~~~~------~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 153 (304)
.+.+.- ...+|..+.||| .+..|++-..|+.|++||+........ ......
T Consensus 99 ~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~------- 170 (452)
T 3pbp_A 99 NVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPN------- 170 (452)
T ss_dssp CCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCC-------
T ss_pred cCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccc-------
Confidence 112221 246799999999 456899999999999999986332222 111000
Q ss_pred CeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEee--CCCeEEEE
Q 036585 154 GLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTT--MEGHIHVL 200 (304)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~~~ 200 (304)
..+........+.+++|.+++-.|.+.+ ..|.|+-.
T Consensus 171 -----------~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 171 -----------NSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp -----------SEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred -----------cccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 0112223446788999999887777755 78887654
No 302
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.23 E-value=0.0011 Score=52.79 Aligned_cols=219 Identities=12% Similarity=0.109 Sum_probs=119.5
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcc-eeeeec---ccccceeEEEEccC---CCeEEEEecC-CCC----Cce
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAAT-CLKTIN---SKKYGVDLVCFTSH---PTTVIYSSKN-GWD----ESL 84 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l~~~~~~-~~d----~~i 84 (304)
.+..+.+.++|+++++ ..+|.|++++ .+++ .+..+. ........|+++|+ +..|+++... ..+ ..|
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 4566888999985554 5669999997 3444 222221 12346889999998 5555554420 002 577
Q ss_pred EEEEccCc-------eee-eeccc-ccccEEEEEEcCCCCEEEEccc-------------CCeEEEEeCCcce-------
Q 036585 85 RLLSLHDN-------KYS-RYFKG-HHDRVVLLSLCSSKDCFISGSL-------------DRTVLLWDQRAEK------- 135 (304)
Q Consensus 85 ~vwd~~~~-------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~------- 135 (304)
..|+.... +.+ ..+.. .......+.|.|+|.++++.+. .|.|.-++....-
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~ 187 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFP 187 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSST
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCC
Confidence 77776643 111 11211 1112357899999987776432 2556666654320
Q ss_pred eeceEE--EeccceeEecC-CCeEEEecCCC-----eEEEEec-------------------------CCCCCceEEEEe
Q 036585 136 CQGLLR--VQGRPAAAYDD-QGLVFGYEKGP-----LDIFSVG-------------------------GDISDANVVKFS 182 (304)
Q Consensus 136 ~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~-------------------------~~~~~v~~~~~~ 182 (304)
....+. .....-+++++ ++.++..+.+. +.+.... ........++|.
T Consensus 188 ~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y 267 (354)
T 3a9g_A 188 NSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFV 267 (354)
T ss_dssp TCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEEC
T ss_pred CCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEE
Confidence 011221 12334577777 66666544432 2211110 111234556662
Q ss_pred -------cCCcEEEEeeCCCeEEEEEcCCC-ceeEEEEeCCCCCCcceEEEEcCCCcEEEEec
Q 036585 183 -------NDGRLMLLTTMEGHIHVLDSFRG-TLLSTYNVKPVSRNSTLEASFSPEGMFVISGS 237 (304)
Q Consensus 183 -------~~~~~l~~~~~dg~i~~~d~~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 237 (304)
.+|.++++.-..+.|...++... +..............+..+++.|||.+.++..
T Consensus 268 ~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 268 HGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 46776666666778888888753 33221222212245788899999997666553
No 303
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.22 E-value=0.0019 Score=55.57 Aligned_cols=201 Identities=8% Similarity=0.025 Sum_probs=111.4
Q ss_pred eeEeecccCcEEEEe-eCCCeEEEEecCCcce-eeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 19 EILQSMEVGIYLVTA-SDDESIRLYDVTAATC-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 19 ~~i~~~~~~~~l~~~-~~d~~i~vw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
..+.+.+.++.|+.+ ...+.|..++++.... ...+...-.....+++.+.+..|+.+... .+.|.+.++.......
T Consensus 43 ~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~--~~~I~v~~~dG~~~~~ 120 (619)
T 3s94_A 43 AAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSE--TNRIEVSNLDGSLRKV 120 (619)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEE
T ss_pred EEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCC--CCEEEEEECCCCCEEE
Confidence 345666655555544 4467788888765432 22233333467889999977777776653 7899999987643322
Q ss_pred ecccccccEEEEEEcCCCCEEEEccc--CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCC
Q 036585 97 YFKGHHDRVVLLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDIS 174 (304)
Q Consensus 97 ~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (304)
.+...-.....+++.|.+..|+.+.. .+.|...++...... .+. .....
T Consensus 121 l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~-~l~----------------------------~~~~~ 171 (619)
T 3s94_A 121 LFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF-III----------------------------NSEIY 171 (619)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEE----------------------------CSSCS
T ss_pred EEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE-EEE----------------------------eCCCC
Confidence 22233345678889886555554442 345555555422111 111 01223
Q ss_pred CceEEEEecCCcEEEEe-eCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCcee
Q 036585 175 DANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEV 253 (304)
Q Consensus 175 ~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~ 253 (304)
..+.++++++++.|+.+ ...+.|..+|+.......... ........+++..+ ..+++-...+.|...|..+++..
T Consensus 172 ~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~---~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVK---GSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGL 247 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCC
T ss_pred CCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEe---CCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCccc
Confidence 45789999876656555 456789999986543322222 11222345777655 34444446678999998777543
Q ss_pred e
Q 036585 254 A 254 (304)
Q Consensus 254 ~ 254 (304)
.
T Consensus 248 ~ 248 (619)
T 3s94_A 248 R 248 (619)
T ss_dssp E
T ss_pred E
Confidence 3
No 304
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.21 E-value=0.0022 Score=55.23 Aligned_cols=200 Identities=8% Similarity=-0.037 Sum_probs=120.0
Q ss_pred eeeEeecccCcE-EEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeee
Q 036585 18 EEILQSMEVGIY-LVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 18 ~~~i~~~~~~~~-l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~ 96 (304)
...+.+.+.+.. +.+-..++.|..+++........+.........+++.+.+..|+.+... .+.|.+.++.......
T Consensus 39 ~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~--~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTG--TNRIEVSKLDGQHRQV 116 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEETTSTTCEE
T ss_pred eEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECC--CCEEEEEecCCCcEEE
Confidence 345666665444 4455567888888877544333333333457789998877777766543 7889999987543322
Q ss_pred ecccccccEEEEEEcCCCCEEEEccc--CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCC
Q 036585 97 YFKGHHDRVVLLSLCSSKDCFISGSL--DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDIS 174 (304)
Q Consensus 97 ~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (304)
.+...-.....+++.|....|+.... .+.|...++......... ....
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~------------------------------~~~~ 166 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV------------------------------PNVG 166 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE------------------------------CSCS
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE------------------------------CCCC
Confidence 22233345689999986555555442 456666666543221111 1123
Q ss_pred CceEEEEecCCcEEEEe-eCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCcee
Q 036585 175 DANVVKFSNDGRLMLLT-TMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEV 253 (304)
Q Consensus 175 ~v~~~~~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~ 253 (304)
....++++++++.|+.+ ...+.|..+|+..... ..+.. .......+++.. +..+++-...+.|...|..+++..
T Consensus 167 ~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~---~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~ 241 (628)
T 4a0p_A 167 RANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIAD---DLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNR 241 (628)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEE---CCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred CcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeec---cCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCce
Confidence 56789999976666655 4567899999865443 33332 223445677754 344444445778888887666543
Q ss_pred e
Q 036585 254 A 254 (304)
Q Consensus 254 ~ 254 (304)
.
T Consensus 242 ~ 242 (628)
T 4a0p_A 242 T 242 (628)
T ss_dssp E
T ss_pred E
Confidence 3
No 305
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.19 E-value=0.00089 Score=51.99 Aligned_cols=227 Identities=12% Similarity=0.161 Sum_probs=110.1
Q ss_pred CcEEEEeeCC----CeEEEEecCCcceeee--ecccccceeEEEEccCCCeEEEEecCC--CCCceEEEEccCceeeee-
Q 036585 27 GIYLVTASDD----ESIRLYDVTAATCLKT--INSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDNKYSRY- 97 (304)
Q Consensus 27 ~~~l~~~~~d----~~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~vwd~~~~~~~~~- 97 (304)
+.+++.|+.+ ..+..||+.+.+-... +...... .+++ ..++..++.|+..+ .-..+.+||..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCR-AGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBS-CEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCccccc-ceEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 4566666643 3578889876643221 1111111 1222 22666667766421 124688899887653222
Q ss_pred -cccccccEEEEEEcCCCCEEEEcccCC-----eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecC
Q 036585 98 -FKGHHDRVVLLSLCSSKDCFISGSLDR-----TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGG 171 (304)
Q Consensus 98 -~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
+........++.+ ++..++.|+.++ .+.+||+.+.+-...-..+ .
T Consensus 94 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p---------------------------~ 144 (302)
T 2xn4_A 94 NMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMN---------------------------T 144 (302)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCS---------------------------S
T ss_pred CCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCC---------------------------C
Confidence 2111111122222 566777776543 4677787765533221100 0
Q ss_pred CCCCceEEEEecCCcEEEEeeCC-------CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC-----
Q 036585 172 DISDANVVKFSNDGRLMLLTTME-------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD----- 239 (304)
Q Consensus 172 ~~~~v~~~~~~~~~~~l~~~~~d-------g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----- 239 (304)
.... .+++. -+++.++.|+.+ ..+.+||+.+.+....-.. +........+. .++++++.|+.+
T Consensus 145 ~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~--~~~~iyv~GG~~~~~~~ 219 (302)
T 2xn4_A 145 RRSS-VGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEM-STRRSGAGVGV--LNNLLYAVGGHDGPLVR 219 (302)
T ss_dssp CCBS-CEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCC-SSCCBSCEEEE--ETTEEEEECCBSSSSBC
T ss_pred cccC-ceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCC-ccccccccEEE--ECCEEEEECCCCCCccc
Confidence 0011 11222 256666666542 4588999987765443221 11122222222 267777777654
Q ss_pred CcEEEEecCCCce--eeeeeccCCCCceEEeCCCCcEEEEecCc-------eEEeccCCcc
Q 036585 240 GSVHAWSVRSGKE--VASWMSFDTEPPVIKWAPGSLMFVTGSSE-------LSFWIPDLSK 291 (304)
Q Consensus 240 g~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-------~~iw~~~~~~ 291 (304)
..+.+||+.+.+- +..+..... -.+++. -++++++.|+.+ +.+|+++.++
T Consensus 220 ~~~~~yd~~~~~W~~~~~~~~~r~-~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 220 KSVEVYDPTTNAWRQVADMNMCRR-NAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCB-SCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred ceEEEEeCCCCCEeeCCCCCCccc-cCeEEE-ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 3689999876542 221211111 112222 266777777643 5666665544
No 306
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.19 E-value=0.0014 Score=52.19 Aligned_cols=225 Identities=12% Similarity=0.096 Sum_probs=119.1
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCccee---eee----cccccceeEEEEccC---CCeEEEEecC-CC----C
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAATCL---KTI----NSKKYGVDLVCFTSH---PTTVIYSSKN-GW----D 81 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~l~~~~~~-~~----d 81 (304)
++..+.+.++|++|+.+...|.|++++.. ++.. ..+ .........++++|+ +..|++.... +. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 56678999999834455567999999853 3321 111 112346789999996 5555554320 00 1
Q ss_pred CceEEEEccCc-------eee-eeccc---ccccEEEEEEcCCCCEEEEccc-------------CCeEEEEeCCcce--
Q 036585 82 ESLRLLSLHDN-------KYS-RYFKG---HHDRVVLLSLCSSKDCFISGSL-------------DRTVLLWDQRAEK-- 135 (304)
Q Consensus 82 ~~i~vwd~~~~-------~~~-~~~~~---~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~-- 135 (304)
..|..+++..+ +.+ ..+.. .......+.|.|+|.++++.+. .|.|.-++....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 24666665432 111 11110 1112357999999965555432 2467777765320
Q ss_pred ----------eeceEEE--eccceeEecC-CCeEEEecCCC---eEEEEec-----------------------------
Q 036585 136 ----------CQGLLRV--QGRPAAAYDD-QGLVFGYEKGP---LDIFSVG----------------------------- 170 (304)
Q Consensus 136 ----------~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~----------------------------- 170 (304)
....+.. ....-+++++ ++.++..+.+. -.+..+.
T Consensus 178 ~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~ 257 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIV 257 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSC
T ss_pred CCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCC
Confidence 1122221 2233466777 56665444331 1111110
Q ss_pred ----------CCCCCceEEEEec-------CCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEE
Q 036585 171 ----------GDISDANVVKFSN-------DGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 233 (304)
Q Consensus 171 ----------~~~~~v~~~~~~~-------~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 233 (304)
.+......+.|.+ +|.++++.-..+.|...++..++..............+..+++.|||.++
T Consensus 258 ~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ly 337 (353)
T 2g8s_A 258 AGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLY 337 (353)
T ss_dssp TTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEE
T ss_pred CCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEE
Confidence 0111344566643 46666666677888888887665443333221223578889999999866
Q ss_pred EEec-CCCcE
Q 036585 234 ISGS-GDGSV 242 (304)
Q Consensus 234 ~~~~-~dg~i 242 (304)
++.. .+|.|
T Consensus 338 v~td~~~g~I 347 (353)
T 2g8s_A 338 VLTDESSGEL 347 (353)
T ss_dssp EEECSTTEEE
T ss_pred EEEeCCCCEE
Confidence 6543 34433
No 307
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.18 E-value=0.0019 Score=53.49 Aligned_cols=155 Identities=12% Similarity=0.206 Sum_probs=95.4
Q ss_pred eeEEEEcc-CCCeEEEEecCCCCCceEEEEccCceeeeeccc---ccccEEEEEE-------cCCCCEEEEcccCC----
Q 036585 60 VDLVCFTS-HPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKG---HHDRVVLLSL-------CSSKDCFISGSLDR---- 124 (304)
Q Consensus 60 v~~~~~~~-~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~l~~~~~dg---- 124 (304)
...|+|.| +...|+++... .+.|++.|+.++........ .......++| +++++.|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~--~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDG--HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEET--EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECC--CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 45889998 45666666542 46799999888765543332 1235889999 99998666665443
Q ss_pred ---eEEEEeCCc-ceee-----ceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecC-CcEEEEeeCC
Q 036585 125 ---TVLLWDQRA-EKCQ-----GLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSND-GRLMLLTTME 194 (304)
Q Consensus 125 ---~i~iwd~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d 194 (304)
.|.+++... +... ..+. . ......++++|+ +.++++-..+
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~--------------------------~----~~~p~giavdp~~g~LYvtd~~~ 268 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIA--------------------------A----YKQCNGATIHPINGELYFNSYEK 268 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEE--------------------------E----ESCCCCEEECTTTCCEEEEETTT
T ss_pred cCceEEEEecCCCCceeecccceeec--------------------------c----CCCceEEEEcCCCCeEEEEECCC
Confidence 255555322 1111 0110 0 013456888995 4545556678
Q ss_pred CeEEEEEcC-------CCce-----------eEE-EEeCCCCCCcceEEEEcCCCcEEEEe-cCCCcEEEEecC
Q 036585 195 GHIHVLDSF-------RGTL-----------LST-YNVKPVSRNSTLEASFSPEGMFVISG-SGDGSVHAWSVR 248 (304)
Q Consensus 195 g~i~~~d~~-------~~~~-----------~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~v~d~~ 248 (304)
+.|..+|+. ++.. ... +.. ........++|+|+|++|+.+ ...+.|+.++..
T Consensus 269 g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~--~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 269 GQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI--ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC--SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CEEEEEecccccccccCceeecccccccccccceeEec--CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 889999987 5553 122 222 233456789999999965555 456788886653
No 308
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=98.18 E-value=0.00088 Score=52.11 Aligned_cols=226 Identities=10% Similarity=0.053 Sum_probs=111.5
Q ss_pred CcEEEEeeC--CCeEEEEecCCcceee--eecccccceeEEEEccCCCeEEEEecC-CCCCceEEEEccCceeeee--cc
Q 036585 27 GIYLVTASD--DESIRLYDVTAATCLK--TINSKKYGVDLVCFTSHPTTVIYSSKN-GWDESLRLLSLHDNKYSRY--FK 99 (304)
Q Consensus 27 ~~~l~~~~~--d~~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~d~~i~vwd~~~~~~~~~--~~ 99 (304)
+.+++.|+. ...+.+||..+++-.. .+......-..+. .++..++.|+.. ..-..+.+||+.+++-... +.
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 345556654 3468899988754322 2221111222222 366666776641 1136788899887753222 22
Q ss_pred cccccEEEEEEcCCCCEEEEcccC------CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCC
Q 036585 100 GHHDRVVLLSLCSSKDCFISGSLD------RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDI 173 (304)
Q Consensus 100 ~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (304)
........+.+ ++..++.|+.+ ..+.+||+.+.+-...-..+. ..
T Consensus 90 ~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~---------------------------~r 140 (306)
T 3ii7_A 90 TPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLT---------------------------QR 140 (306)
T ss_dssp SCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSS---------------------------CC
T ss_pred ccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcC---------------------------Cc
Confidence 11111122222 56677777654 358888887765432211000 00
Q ss_pred CCceEEEEecCCcEEEEeeC---------CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC-----
Q 036585 174 SDANVVKFSNDGRLMLLTTM---------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD----- 239 (304)
Q Consensus 174 ~~v~~~~~~~~~~~l~~~~~---------dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----- 239 (304)
.. .+++ .-+++.++.|+. -..+.+||+.+.+....-.. +.....-..+.+ ++++++.|+.+
T Consensus 141 ~~-~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~--~~~i~v~GG~~~~~~~ 215 (306)
T 3ii7_A 141 CS-HGMV-EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPM-IEARKNHGLVFV--KDKIFAVGGQNGLGGL 215 (306)
T ss_dssp BS-CEEE-EETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCC-SSCCBSCEEEEE--TTEEEEECCEETTEEB
T ss_pred ce-eEEE-EECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCc-cchhhcceEEEE--CCEEEEEeCCCCCCCC
Confidence 11 1111 225666666653 34588999988754433221 111122222222 67777777643
Q ss_pred CcEEEEecCCCce--eeeeeccCCCCceEEeCCCCcEEEEecCc-------eEEeccCCc
Q 036585 240 GSVHAWSVRSGKE--VASWMSFDTEPPVIKWAPGSLMFVTGSSE-------LSFWIPDLS 290 (304)
Q Consensus 240 g~i~v~d~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~s~~~d-------~~iw~~~~~ 290 (304)
..+.+||+.+.+- +..+.........+.+ ++++++.|+.+ +.+|+++.+
T Consensus 216 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 216 DNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp CCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred ceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 4689999877542 2222211122223333 66777777642 556666554
No 309
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.18 E-value=0.00076 Score=53.38 Aligned_cols=195 Identities=12% Similarity=0.090 Sum_probs=109.0
Q ss_pred ceeEEEEccCCCeEEEEec-----C----CCCCceEEEEccCce-eeeec--cc-----ccccEEEEEEcC--CCC-EEE
Q 036585 59 GVDLVCFTSHPTTVIYSSK-----N----GWDESLRLLSLHDNK-YSRYF--KG-----HHDRVVLLSLCS--SKD-CFI 118 (304)
Q Consensus 59 ~v~~~~~~~~~~~l~~~~~-----~----~~d~~i~vwd~~~~~-~~~~~--~~-----~~~~v~~~~~~~--~~~-~l~ 118 (304)
....+...|+|..+++++. . ..+|.|.++|..+.. ....+ .+ ..-....+.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 4566777777654444310 0 018999999987421 11122 11 223566777765 343 343
Q ss_pred Ecc-c--CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecC-CCCCceEEEEecCCcEEEEee--
Q 036585 119 SGS-L--DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGG-DISDANVVKFSNDGRLMLLTT-- 192 (304)
Q Consensus 119 ~~~-~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~-- 192 (304)
.+. . +..|.+|++........+. -.+.+ .-...+.+.+.++|.+.++..
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~-------------------------~~~~g~~~~~pND~~v~~~G~fyvt~~~~ 185 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHL-------------------------KTIRHKLLPSVNDIVAVGPEHFYATNDHY 185 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEE-------------------------EEECCTTCSSEEEEEEEETTEEEEEESCS
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEE-------------------------eccccCCCCCCceEEEeCCCCEEecCCcE
Confidence 332 2 4567776665432111110 00111 124568899999998766643
Q ss_pred ---------------CCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec-CCCcEEEEecCC-Cce--e
Q 036585 193 ---------------MEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS-GDGSVHAWSVRS-GKE--V 253 (304)
Q Consensus 193 ---------------~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~v~d~~~-~~~--~ 253 (304)
..|.|+.+|. ++...... .-...+.++||||++.|+.+. ..+.|+.|++.. ++. .
T Consensus 186 ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~----~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~ 259 (355)
T 3sre_A 186 FIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVAE----GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPL 259 (355)
T ss_dssp CSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEEE----EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred eCCcccccchhhccCCccEEEEEEC--CeEEEeec----CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecC
Confidence 1355666665 33222222 234567899999998877764 567899999863 332 2
Q ss_pred eeeeccCCCCceEEeCC-CCcEEEEecCc-eEEe
Q 036585 254 ASWMSFDTEPPVIKWAP-GSLMFVTGSSE-LSFW 285 (304)
Q Consensus 254 ~~~~~~~~~i~~~~~~~-~~~~l~s~~~d-~~iw 285 (304)
+.+ ...+..-.+++.+ +|++.+++..+ .+|+
T Consensus 260 ~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~ 292 (355)
T 3sre_A 260 RVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIF 292 (355)
T ss_dssp EEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHH
T ss_pred EEE-eCCCCCceEEEeCCCCcEEEEecCCceEEE
Confidence 233 2345567899999 59888876655 4444
No 310
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=98.11 E-value=0.0012 Score=51.53 Aligned_cols=228 Identities=11% Similarity=0.113 Sum_probs=111.2
Q ss_pred cCcEEEEeeCC----CeEEEEecCCcceeee--ecccccceeEEEEccCCCeEEEEec----C--CCCCceEEEEccCce
Q 036585 26 VGIYLVTASDD----ESIRLYDVTAATCLKT--INSKKYGVDLVCFTSHPTTVIYSSK----N--GWDESLRLLSLHDNK 93 (304)
Q Consensus 26 ~~~~l~~~~~d----~~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~----~--~~d~~i~vwd~~~~~ 93 (304)
++.+++.|+.+ ..+.+||..+.+-... +...... .+++ ..++..++.|+. . .....+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSG-LAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCccccc-ceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 45677777742 3588899876543221 1111111 1222 225666666653 1 012468889988765
Q ss_pred eeee--cccccccEEEEEEcCCCCEEEEcccC-----CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEE
Q 036585 94 YSRY--FKGHHDRVVLLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDI 166 (304)
Q Consensus 94 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (304)
-... +.........+.+ +++.++.|+.+ ..+.+||+.+.+-...-..+
T Consensus 102 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p----------------------- 156 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPML----------------------- 156 (308)
T ss_dssp EEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCS-----------------------
T ss_pred EeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCC-----------------------
Confidence 3222 2111111122222 56667776643 35777887765433221100
Q ss_pred EEecCCCCCceEEEEecCCcEEEEeeCC-----CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC--
Q 036585 167 FSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD-- 239 (304)
Q Consensus 167 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-- 239 (304)
.....-..+.+ +++.++.|+.+ ..+.+||+.+.+....-.. +........+.+ ++++++.|+.+
T Consensus 157 ----~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~ 227 (308)
T 1zgk_A 157 ----TRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAM-NTIRSGAGVCVL--HNCIYAAGGYDGQ 227 (308)
T ss_dssp ----SCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCC-SSCCBSCEEEEE--TTEEEEECCBCSS
T ss_pred ----ccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCC-CCccccceEEEE--CCEEEEEeCCCCC
Confidence 00011112222 66777777654 4689999887654432211 111222222333 67777777654
Q ss_pred ---CcEEEEecCCCcee--eeeeccCCCCceEEeCCCCcEEEEecCc-------eEEeccCCcc
Q 036585 240 ---GSVHAWSVRSGKEV--ASWMSFDTEPPVIKWAPGSLMFVTGSSE-------LSFWIPDLSK 291 (304)
Q Consensus 240 ---g~i~v~d~~~~~~~--~~~~~~~~~i~~~~~~~~~~~l~s~~~d-------~~iw~~~~~~ 291 (304)
..+.+||+.+.+-. ..+...... .+++. -++++++.|+.+ +.+|+++.++
T Consensus 228 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 228 DQLNSVERYDVETETWTFVAPMKHRRSA-LGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp SBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CccceEEEEeCCCCcEEECCCCCCCccc-eEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 46999998775422 112111111 12222 266777777643 5566665543
No 311
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.10 E-value=0.0018 Score=50.28 Aligned_cols=207 Identities=9% Similarity=0.040 Sum_probs=121.5
Q ss_pred eeeEeeccc-CcEEEEeeCCCeEEEEecCCcceeee-ecc----c--ccceeEEEE---ccCCCeEEEEecC--------
Q 036585 18 EEILQSMEV-GIYLVTASDDESIRLYDVTAATCLKT-INS----K--KYGVDLVCF---TSHPTTVIYSSKN-------- 78 (304)
Q Consensus 18 ~~~i~~~~~-~~~l~~~~~d~~i~vw~~~~~~~~~~-~~~----~--~~~v~~~~~---~~~~~~l~~~~~~-------- 78 (304)
++.+.|.+. +.++++.-..++|..|+...+..... +.+ . ...+..+.| .|++..+++....
T Consensus 15 PE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 15 PEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp CSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred CcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 455677665 44444444799999999875543322 222 1 124578999 6886666643310
Q ss_pred --CCCCceEEEEcc---Cceeeeecc--ccc-----------ccEEEEEEcCCCCEEEEcccC-CeEEEEeCCcceeece
Q 036585 79 --GWDESLRLLSLH---DNKYSRYFK--GHH-----------DRVVLLSLCSSKDCFISGSLD-RTVLLWDQRAEKCQGL 139 (304)
Q Consensus 79 --~~d~~i~vwd~~---~~~~~~~~~--~~~-----------~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~ 139 (304)
..+..|..||+. +++.+.... ... .....++..++|+..++++.. +.|...+..... ...
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~ 173 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VST 173 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-Eee
Confidence 015779999998 776654332 111 247889999999999988877 777777665432 221
Q ss_pred EEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeC--C--
Q 036585 140 LRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVK--P-- 215 (304)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~--~-- 215 (304)
+...... .......+.|+++|+|+.|++....|.+..+|+.+.... .+... .
T Consensus 174 ~~~~~~~-----------------------~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~-~v~~~~~G~~ 229 (334)
T 2p9w_A 174 FAWESGN-----------------------GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAW-PEPVKINGDF 229 (334)
T ss_dssp EEECCCC-----------------------SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCC-CEECEESSCC
T ss_pred eeecCCC-----------------------cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcce-eecccccCCc
Confidence 1111100 012234678999999998888877999999998843220 12210 0
Q ss_pred CCCCcceEE-EEcCCCcE-EEEecCCCcEEEEecCC
Q 036585 216 VSRNSTLEA-SFSPEGMF-VISGSGDGSVHAWSVRS 249 (304)
Q Consensus 216 ~~~~~i~~~-~~s~~~~~-l~~~~~dg~i~v~d~~~ 249 (304)
..-.....+ .--.+|+. |++....+.+.+.+...
T Consensus 230 ~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 230 GTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp CCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred ccccCcccccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 011122332 33347777 44444566666666544
No 312
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.93 E-value=0.0017 Score=50.36 Aligned_cols=191 Identities=12% Similarity=0.114 Sum_probs=98.2
Q ss_pred ccCcEEEEeeCC-----CeEEEEecCCcc---e--eeeecccccceeEEEEccCCCeEEEEecCC--CCCceEEEEccCc
Q 036585 25 EVGIYLVTASDD-----ESIRLYDVTAAT---C--LKTINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDN 92 (304)
Q Consensus 25 ~~~~~l~~~~~d-----~~i~vw~~~~~~---~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~vwd~~~~ 92 (304)
.++++++.|+.+ ..+.+||..+.+ - +..+.........+.+ +++.++.|+..+ ....+.+||+.+.
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 356777777755 358899987765 2 2222221111222222 666667766421 1236888898876
Q ss_pred eeee--ecccccccEEEEEEcCCCCEEEEcccC-----CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeE
Q 036585 93 KYSR--YFKGHHDRVVLLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLD 165 (304)
Q Consensus 93 ~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
+-.. .+........++.+ +++.++.|+.+ ..+.+||+.+.+-...-..+
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p---------------------- 194 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMA---------------------- 194 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCS----------------------
T ss_pred eEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCC----------------------
Confidence 5322 12111111122222 56677777654 35778888766443221100
Q ss_pred EEEecCCCCCceEEEEecCCcEEEEeeCC-----CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC-
Q 036585 166 IFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD- 239 (304)
Q Consensus 166 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d- 239 (304)
........+. -+++.++.|+.+ ..+.+||+.+.+....-.. +........+. .+++.++.|+.+
T Consensus 195 -----~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~--~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 195 -----TKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM-TTPRCYVGATV--LRGRLYAIAGYDG 264 (301)
T ss_dssp -----SCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC-SSCCBSCEEEE--ETTEEEEECCBCS
T ss_pred -----cccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC-CCcccceeEEE--ECCEEEEEcCcCC
Confidence 0001111122 256777777654 4689999988765433221 11122222222 267777777755
Q ss_pred ----CcEEEEecCCCc
Q 036585 240 ----GSVHAWSVRSGK 251 (304)
Q Consensus 240 ----g~i~v~d~~~~~ 251 (304)
..+.+||+++.+
T Consensus 265 ~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 265 NSLLSSIECYDPIIDS 280 (301)
T ss_dssp SSBEEEEEEEETTTTE
T ss_pred CcccccEEEEcCCCCe
Confidence 357888887653
No 313
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.86 E-value=0.002 Score=49.94 Aligned_cols=190 Identities=13% Similarity=0.181 Sum_probs=96.0
Q ss_pred cCcEEEEeeCCC-----eEEEEecCCcceee--eecccccceeEEEEccCCCeEEEEecCCC--CCceEEEEccCceeee
Q 036585 26 VGIYLVTASDDE-----SIRLYDVTAATCLK--TINSKKYGVDLVCFTSHPTTVIYSSKNGW--DESLRLLSLHDNKYSR 96 (304)
Q Consensus 26 ~~~~l~~~~~d~-----~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~~~--d~~i~vwd~~~~~~~~ 96 (304)
++.+++.|+.++ .+.+||..+.+-.. .+......-..+. .+++.++.|+..+. -..+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 567777777543 57888887654222 2221111112222 26677777765210 1357788887765322
Q ss_pred e--cccccccEEEEEEcCCCCEEEEcccC-------CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEE
Q 036585 97 Y--FKGHHDRVVLLSLCSSKDCFISGSLD-------RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIF 167 (304)
Q Consensus 97 ~--~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
. +........++.+ +++.++.|+.+ ..+.+||+.+.+-...-..+
T Consensus 139 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p------------------------ 192 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMS------------------------ 192 (302)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCS------------------------
T ss_pred cCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCc------------------------
Confidence 2 2111111122222 56666666542 34778888766543221100
Q ss_pred EecCCCCCceEEEEecCCcEEEEeeCC-----CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCC--
Q 036585 168 SVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG-- 240 (304)
Q Consensus 168 ~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-- 240 (304)
........+. -++++++.|+.+ ..+.+||+.+.+....-.. +........+. .+++.++.|+.++
T Consensus 193 ---~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~~~~~--~~~~i~v~GG~~~~~ 264 (302)
T 2xn4_A 193 ---TRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADM-NMCRRNAGVCA--VNGLLYVVGGDDGSC 264 (302)
T ss_dssp ---SCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCC-SSCCBSCEEEE--ETTEEEEECCBCSSS
T ss_pred ---cccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCC-CCccccCeEEE--ECCEEEEECCcCCCc
Confidence 0001111122 266777777654 3689999987765433221 11111122222 3677777777553
Q ss_pred ---cEEEEecCCCc
Q 036585 241 ---SVHAWSVRSGK 251 (304)
Q Consensus 241 ---~i~v~d~~~~~ 251 (304)
.+.+||+.+.+
T Consensus 265 ~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 265 NLASVEYYNPTTDK 278 (302)
T ss_dssp BCCCEEEEETTTTE
T ss_pred ccccEEEEcCCCCe
Confidence 48999987654
No 314
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.83 E-value=0.0032 Score=50.59 Aligned_cols=161 Identities=12% Similarity=0.124 Sum_probs=99.8
Q ss_pred EEccCCCeEEEEecCCCCCceEEEEccCceeeeecccc----cccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeece
Q 036585 64 CFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGH----HDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGL 139 (304)
Q Consensus 64 ~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 139 (304)
....++..++++- ++.||.-++......+.++.. -..|..+..+|+|++|+..+. ..|.|-.+..+.....
T Consensus 27 ~~~~n~t~i~~a~----~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~ 101 (452)
T 3pbp_A 27 FSSQNGTRIVFIQ----DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVE 101 (452)
T ss_dssp EEETTTTEEEEEE----TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCC
T ss_pred EEEcCCCEEEEEE----CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCc
Confidence 3445677777776 778888888754444444322 225778999999999988765 5788887763321110
Q ss_pred EEEeccceeEecCCCeEEEecCCCeEEEEecC----CCCCceEEEEecC---CcEEEEeeCCCeEEEEEcCCCc--eeEE
Q 036585 140 LRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGG----DISDANVVKFSND---GRLMLLTTMEGHIHVLDSFRGT--LLST 210 (304)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~---~~~l~~~~~dg~i~~~d~~~~~--~~~~ 210 (304)
- ... ...-..+.|.+.. ...+|..+.|+|- +..|++-..|+.|++||+.... +. .
T Consensus 102 ~--~~~-------------~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~ 165 (452)
T 3pbp_A 102 D--VSI-------------QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-V 165 (452)
T ss_dssp C--HHH-------------HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-E
T ss_pred c--ccc-------------ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-c
Confidence 0 000 0000011222221 3578999999995 4579999999999999997522 11 2
Q ss_pred EE------eCCCCCCcceEEEEcCCCcEEEE--ecCCCcEEEE
Q 036585 211 YN------VKPVSRNSTLEASFSPEGMFVIS--GSGDGSVHAW 245 (304)
Q Consensus 211 ~~------~~~~~~~~i~~~~~s~~~~~l~~--~~~dg~i~v~ 245 (304)
+. ........+.+++|.+++-.|+. .+..|.|+-.
T Consensus 166 L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 166 LNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred hhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 21 11123367889999998876666 4588887654
No 315
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.79 E-value=0.0083 Score=47.72 Aligned_cols=214 Identities=11% Similarity=0.077 Sum_probs=115.3
Q ss_pred cceeEEEEccCCCeEEEEecCCCCCceEEEEccCce-eeeec---ccccccEEEEEEcCC---CCEEEEccc----C---
Q 036585 58 YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNK-YSRYF---KGHHDRVVLLSLCSS---KDCFISGSL----D--- 123 (304)
Q Consensus 58 ~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~-~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~~----d--- 123 (304)
.....|+|.|+++ |+++.. ++.|++++ .+++ .+..+ .........++++|+ +..|+.+.. +
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~---~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTER---PGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTE-EEEEET---TTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCe-EEEEeC---CCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 3567899999997 444454 78999887 3444 22221 112346789999997 445554432 2
Q ss_pred -CeEEEEeCCcc--e---eeceEE-Ee-----ccceeEecCCCeEEEecCC-------------CeEEEEecCCC-----
Q 036585 124 -RTVLLWDQRAE--K---CQGLLR-VQ-----GRPAAAYDDQGLVFGYEKG-------------PLDIFSVGGDI----- 173 (304)
Q Consensus 124 -g~i~iwd~~~~--~---~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~----- 173 (304)
..|..|+.... . ....+. .. ....+.+.+++.++..... .-+++.+....
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 56777776543 1 111111 11 2235778888866643210 12444443221
Q ss_pred -------------CCceEEEEec-CCcEEEEeeCCC---eEEEEEcCCCce----------------eEEEEeCCCCCCc
Q 036585 174 -------------SDANVVKFSN-DGRLMLLTTMEG---HIHVLDSFRGTL----------------LSTYNVKPVSRNS 220 (304)
Q Consensus 174 -------------~~v~~~~~~~-~~~~l~~~~~dg---~i~~~d~~~~~~----------------~~~~~~~~~~~~~ 220 (304)
.....++|+| +|.++++-.... .|.+.. .+.. ....... .....
T Consensus 184 npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~~a 260 (354)
T 3a9g_A 184 NPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTG-SETWA 260 (354)
T ss_dssp SSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECT-TCCCC
T ss_pred CCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecC-CCCcC
Confidence 1245688888 565444322211 233322 1110 0001100 11234
Q ss_pred ceEEEEc-------CCCcEEEEecCCCcEEEEecCCC-cee--eee-eccCCCCceEEeCCCCcEEEEec
Q 036585 221 TLEASFS-------PEGMFVISGSGDGSVHAWSVRSG-KEV--ASW-MSFDTEPPVIKWAPGSLMFVTGS 279 (304)
Q Consensus 221 i~~~~~s-------~~~~~l~~~~~dg~i~v~d~~~~-~~~--~~~-~~~~~~i~~~~~~~~~~~l~s~~ 279 (304)
...++|. .+|+++++.-..+.|...++... +.. ..+ .+....+..+++.|||.+.++..
T Consensus 261 p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 261 PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 6677883 57777777777778888888753 322 222 22245789999999997666654
No 316
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.79 E-value=0.0032 Score=48.89 Aligned_cols=190 Identities=6% Similarity=0.070 Sum_probs=97.7
Q ss_pred cCcEEEEeeCC----CeEEEEecCCcceee--eecccccceeEEEEccCCCeEEEEecC---CCCCceEEEEccCceeee
Q 036585 26 VGIYLVTASDD----ESIRLYDVTAATCLK--TINSKKYGVDLVCFTSHPTTVIYSSKN---GWDESLRLLSLHDNKYSR 96 (304)
Q Consensus 26 ~~~~l~~~~~d----~~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~---~~d~~i~vwd~~~~~~~~ 96 (304)
++.+++.|+.+ ..+.+||..+.+-.. .+.........+. -+++.++.|+.. .....+.+||..+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56777787755 568889988764322 2221111112222 266677777651 012568889988775332
Q ss_pred e--cccccccEEEEEEcCCCCEEEEccc---------CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeE
Q 036585 97 Y--FKGHHDRVVLLSLCSSKDCFISGSL---------DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLD 165 (304)
Q Consensus 97 ~--~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
. +........++.+ +++.++.|+. -..+.+||+.+.+-...-..+
T Consensus 133 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p---------------------- 188 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMI---------------------- 188 (306)
T ss_dssp ECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCS----------------------
T ss_pred CCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCcc----------------------
Confidence 2 1111111122222 5666666653 244778888776433221100
Q ss_pred EEEecCCCCCceEEEEecCCcEEEEeeCC-----CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC-
Q 036585 166 IFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD- 239 (304)
Q Consensus 166 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d- 239 (304)
..... ..+.. -++++++.|+.+ ..+.+||+.+.+....-.. +........+.+ ++++++.|+.+
T Consensus 189 -----~~r~~-~~~~~-~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~--~~~i~v~GG~~~ 258 (306)
T 3ii7_A 189 -----EARKN-HGLVF-VKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM-PWKGVTVKCAAV--GSIVYVLAGFQG 258 (306)
T ss_dssp -----SCCBS-CEEEE-ETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC-SCCBSCCEEEEE--TTEEEEEECBCS
T ss_pred -----chhhc-ceEEE-ECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC-CCCccceeEEEE--CCEEEEEeCcCC
Confidence 00011 11222 266677776643 3689999987764433211 112222233333 67778888744
Q ss_pred ----CcEEEEecCCCc
Q 036585 240 ----GSVHAWSVRSGK 251 (304)
Q Consensus 240 ----g~i~v~d~~~~~ 251 (304)
..+.+||+.+.+
T Consensus 259 ~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 259 VGRLGHILEYNTETDK 274 (306)
T ss_dssp SSBCCEEEEEETTTTE
T ss_pred CeeeeeEEEEcCCCCe
Confidence 468899987753
No 317
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.75 E-value=0.0092 Score=46.88 Aligned_cols=218 Identities=9% Similarity=0.054 Sum_probs=113.2
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceeeeec----ccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceee
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTIN----SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYS 95 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~ 95 (304)
.|.+...+..++ ++.+|.|. ...+.++.-..+. .....+..+.|.+ + .+++++. ++.|.. ....++.-
T Consensus 40 ~v~~~~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~---~g~i~~-S~DgG~tW 111 (327)
T 2xbg_A 40 DMSFIDRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGE---PPIMLH-TTDGGQSW 111 (327)
T ss_dssp EEEESSSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEE---TTEEEE-ESSTTSSC
T ss_pred EEEECCCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEEC---CCeEEE-ECCCCCCc
Confidence 344555566666 45567553 3333343222221 1234688899875 3 3444444 664433 22223321
Q ss_pred eecc---cccccEEEEEEcCCCCEEEEcccCCeEE-EEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecC
Q 036585 96 RYFK---GHHDRVVLLSLCSSKDCFISGSLDRTVL-LWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGG 171 (304)
Q Consensus 96 ~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
.... .+...+..+.+.+++..++.+. ++.|. -.| .++.-..... .
T Consensus 112 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~D--gG~tW~~~~~----------------------------~ 160 (327)
T 2xbg_A 112 SQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIYRTKD--SGKNWQALVQ----------------------------E 160 (327)
T ss_dssp EECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEEEESS--TTSSEEEEEC----------------------------S
T ss_pred eECccccCCCCCeEEEEEECCCCEEEEeC-CccEEEEcC--CCCCCEEeec----------------------------C
Confidence 2111 2334567777776666555553 45432 222 2222111110 1
Q ss_pred CCCCceEEEEecCCcEEEEeeCCCeEEE-EEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCC
Q 036585 172 DISDANVVKFSNDGRLMLLTTMEGHIHV-LDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSG 250 (304)
Q Consensus 172 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~-~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~ 250 (304)
....+..+.+.|++.+++++. +|.+.. .|- .++.-..+.. .....+..+.++++++.++.+ .+|.+++.+...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-gG~tW~~~~~--~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G 235 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-GQTAWEPHNR--TTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNS 235 (327)
T ss_dssp CCCCEEEEEECTTSCEEEEET-TSSEEEEECT-TCSSCEEEEC--CSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEE
T ss_pred CCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-CCCceeECCC--CCCCccceeEECCCCCEEEEe-CCceEEEecCCCC
Confidence 224567789999888776664 444443 331 1222222222 345678889999998766554 5787777643324
Q ss_pred ceeeeeec----cCCCCceEEeCCCCcEEEEecCc
Q 036585 251 KEVASWMS----FDTEPPVIKWAPGSLMFVTGSSE 281 (304)
Q Consensus 251 ~~~~~~~~----~~~~i~~~~~~~~~~~l~s~~~d 281 (304)
+....+.. ....+..+.+.+++..++.+...
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g 270 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG 270 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC
Confidence 43332221 22357889999888877776654
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.75 E-value=0.0088 Score=46.64 Aligned_cols=187 Identities=11% Similarity=0.108 Sum_probs=93.5
Q ss_pred EEEEeeCCCeEEEEecCCcceee-eecccccceeEEEEccCCCeEEEEec----CC----CCCceEEEEccCceeeee--
Q 036585 29 YLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTVIYSSK----NG----WDESLRLLSLHDNKYSRY-- 97 (304)
Q Consensus 29 ~l~~~~~d~~i~vw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~----~~----~d~~i~vwd~~~~~~~~~-- 97 (304)
+++.|+ ..+.+||..+++-.. .+..........+...++..++.|+. .+ ....+.+||..+++-...
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 344555 469999998776332 12111122233334457777777773 01 012377888887653221
Q ss_pred cccccccEEEEEEcCCCCEEEEcccC--------CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEe
Q 036585 98 FKGHHDRVVLLSLCSSKDCFISGSLD--------RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSV 169 (304)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
+.........+.+ ++..++.|+.+ ..+.+||+.+.+-...-..+
T Consensus 85 ~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p-------------------------- 136 (315)
T 4asc_A 85 LPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP-------------------------- 136 (315)
T ss_dssp BSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS--------------------------
T ss_pred CCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC--------------------------
Confidence 1111111112222 56666666632 35788888766432211100
Q ss_pred cCCCCCceEEEEecCCcEEEEeeC------CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCC---
Q 036585 170 GGDISDANVVKFSNDGRLMLLTTM------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG--- 240 (304)
Q Consensus 170 ~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--- 240 (304)
.......+..-+++.++.|+. -..+.+||..+.+....-.. +........+.+ ++++++.|+.++
T Consensus 137 ---~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 210 (315)
T 4asc_A 137 ---YVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM-QTARSLFGATVH--DGRIIVAAGVTDTGL 210 (315)
T ss_dssp ---SCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC-SSCCBSCEEEEE--TTEEEEEEEECSSSE
T ss_pred ---CcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC-CCchhceEEEEE--CCEEEEEeccCCCCc
Confidence 001111122236667777765 24689999887754432211 111112222222 667777776544
Q ss_pred --cEEEEecCCCc
Q 036585 241 --SVHAWSVRSGK 251 (304)
Q Consensus 241 --~i~v~d~~~~~ 251 (304)
.+.+||+.+.+
T Consensus 211 ~~~~~~yd~~~~~ 223 (315)
T 4asc_A 211 TSSAEVYSITDNK 223 (315)
T ss_dssp EEEEEEEETTTTE
T ss_pred cceEEEEECCCCe
Confidence 48889987653
No 319
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.71 E-value=0.03 Score=51.80 Aligned_cols=253 Identities=12% Similarity=0.108 Sum_probs=136.2
Q ss_pred CcEEEEeeC-CCeEEEEecCCcceeeeeccc-ccceeEEEEc--cCCCeEEEEecCCCCCceEEEEcc--Cceeee---e
Q 036585 27 GIYLVTASD-DESIRLYDVTAATCLKTINSK-KYGVDLVCFT--SHPTTVIYSSKNGWDESLRLLSLH--DNKYSR---Y 97 (304)
Q Consensus 27 ~~~l~~~~~-d~~i~vw~~~~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~~~~~~d~~i~vwd~~--~~~~~~---~ 97 (304)
+++++.|.+ |++++|+++.+.+.+....-. .....++.+. ....+|..|-. ||.+.-+.+. +++... .
T Consensus 571 s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~---dG~l~~~~~d~~tg~l~d~r~~ 647 (1158)
T 3ei3_A 571 SPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG---DGALFYFGLNIETGLLSDRKKV 647 (1158)
T ss_dssp CSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEET---TSEEEEEEECTTTCCEEEEEEE
T ss_pred ccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeC---CCeEEEEEEcCCCCccccceeE
Confidence 479999997 999999999877665432211 1233334333 23457788877 8888666553 343221 1
Q ss_pred cccccccEEEEEEcCCCC-EEEEcccCCeEEEEeCCcceeeceEEEecc---ceeEe----cCCCeEEEecCCCeEEEEe
Q 036585 98 FKGHHDRVVLLSLCSSKD-CFISGSLDRTVLLWDQRAEKCQGLLRVQGR---PAAAY----DDQGLVFGYEKGPLDIFSV 169 (304)
Q Consensus 98 ~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~ 169 (304)
+-+ ..++.-..+...+. .+++.+ +....+|--+ ++.. ....... ....+ .+++.++ ...+.+++..+
T Consensus 648 ~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~~l~-~s~l~~~~v~~~~~F~se~~~~g~v~-~~~~~LrI~~i 722 (1158)
T 3ei3_A 648 TLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-HKLV-FSNVNLKEVNYMCPLNSDGYPDSLAL-ANNSTLTIGTI 722 (1158)
T ss_dssp ECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESS-SSEE-EEEBSSSCCCEEEEECCSSSTTEEEE-ECSSCEEEEEE
T ss_pred EcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-CceE-EeccChHHhceEeccCcccCCCcEEE-EcCCceEEEEe
Confidence 222 23444333433333 233333 2333333322 1111 0011110 11122 2344443 33444666665
Q ss_pred cCC----------CCCceEEEEecCCcEEEEeeC----------------------------------------------
Q 036585 170 GGD----------ISDANVVKFSNDGRLMLLTTM---------------------------------------------- 193 (304)
Q Consensus 170 ~~~----------~~~v~~~~~~~~~~~l~~~~~---------------------------------------------- 193 (304)
... ...+..++++|+.+.++++..
T Consensus 723 ~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 802 (1158)
T 3ei3_A 723 DEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGE 802 (1158)
T ss_dssp CCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCC
T ss_pred cccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCC
Confidence 432 234667888887766554331
Q ss_pred ---CCeEEEEEcCCCceeEEEEeCCCCCCcceEEE---EcCC-CcEEEEec----------CCCcEEEEecCCCceeeee
Q 036585 194 ---EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEAS---FSPE-GMFVISGS----------GDGSVHAWSVRSGKEVASW 256 (304)
Q Consensus 194 ---dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~---~s~~-~~~l~~~~----------~dg~i~v~d~~~~~~~~~~ 256 (304)
-+.|++.|..+.+.+..+... ....+.+++ |..+ ..+++.|+ ..|.|++|++.+++. ..+
T Consensus 803 ~~~~s~i~lidp~t~~~i~~~~l~--~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL-~lv 879 (1158)
T 3ei3_A 803 EVEVHNLLIIDQHTFEVLHAHQFL--QNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKL-QTV 879 (1158)
T ss_dssp EEEEEEEEEEETTTCCEEEEEECC--TTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEE-EEE
T ss_pred ceeeEEEEEEeCCCCeEEEEEeCC--CCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEE-EEE
Confidence 124778887778777777643 234444444 3332 46888775 357899999975433 222
Q ss_pred --eccCCCCceEEeCCCCcEEEEecCceEEeccCCcc
Q 036585 257 --MSFDTEPPVIKWAPGSLMFVTGSSELSFWIPDLSK 291 (304)
Q Consensus 257 --~~~~~~i~~~~~~~~~~~l~s~~~d~~iw~~~~~~ 291 (304)
....+++++++-- +|+++++.+..+++|++..++
T Consensus 880 ~~~~v~g~v~al~~~-~g~Lla~ig~~l~vy~l~~~~ 915 (1158)
T 3ei3_A 880 AEKEVKGAVYSMVEF-NGKLLASINSTVRLYEWTTEK 915 (1158)
T ss_dssp EEEEESSCEEEEEEE-TTEEEEEETTEEEEEEECTTS
T ss_pred EEEEcCCcCEEEeee-CCEEEEEcCCEEEEEECCCCc
Confidence 2356788888733 466666666669999997654
No 320
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.70 E-value=0.022 Score=49.83 Aligned_cols=230 Identities=8% Similarity=0.004 Sum_probs=116.2
Q ss_pred ccCcEEEEeeCC----CeEEEEecCCcceeeee-c-----cc-ccceeEEEEcc-CCCeEEEEecCCC---CCceEEEEc
Q 036585 25 EVGIYLVTASDD----ESIRLYDVTAATCLKTI-N-----SK-KYGVDLVCFTS-HPTTVIYSSKNGW---DESLRLLSL 89 (304)
Q Consensus 25 ~~~~~l~~~~~d----~~i~vw~~~~~~~~~~~-~-----~~-~~~v~~~~~~~-~~~~l~~~~~~~~---d~~i~vwd~ 89 (304)
.++.+++.|+.+ ..+.+||..+++-...- . .. ...-.+++..+ +++.++.|+..+. -..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456777788753 35888888766432221 1 11 11123344443 6777777775321 246889999
Q ss_pred cCceeeee--cccccccEEEEEEcCCCCEEEEcccCC--eEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeE
Q 036585 90 HDNKYSRY--FKGHHDRVVLLSLCSSKDCFISGSLDR--TVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLD 165 (304)
Q Consensus 90 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
.+.+-... +...... .++....++..++.|+.++ .+.+||+.+.+....-.....+
T Consensus 476 ~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p------------------- 535 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFF------------------- 535 (695)
T ss_dssp TTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGG-------------------
T ss_pred CCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCC-------------------
Confidence 88653322 2111111 1223323778888887654 6889998876543221100000
Q ss_pred EEEecCCCCCceEEEEecC-CcEEEEeeC--C-----CeEEEEEcCCCce-----eEEEEeC-CCCCCcceEEEEcCCCc
Q 036585 166 IFSVGGDISDANVVKFSND-GRLMLLTTM--E-----GHIHVLDSFRGTL-----LSTYNVK-PVSRNSTLEASFSPEGM 231 (304)
Q Consensus 166 ~~~~~~~~~~v~~~~~~~~-~~~l~~~~~--d-----g~i~~~d~~~~~~-----~~~~~~~-~~~~~~i~~~~~s~~~~ 231 (304)
........+.+..+ ++.++.|+. + ..+.+||+.+.+. -..+... ....... +++...+++
T Consensus 536 -----~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~ 609 (695)
T 2zwa_A 536 -----QNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRK 609 (695)
T ss_dssp -----GSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTE
T ss_pred -----CcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCE
Confidence 01112233555554 667777765 2 4689999988772 1222211 1111222 233333377
Q ss_pred EEEEecC--------CCcEEEEecCCCceeeeee--cc------CCCC-ceEEeCCCCcEEEEecCc
Q 036585 232 FVISGSG--------DGSVHAWSVRSGKEVASWM--SF------DTEP-PVIKWAPGSLMFVTGSSE 281 (304)
Q Consensus 232 ~l~~~~~--------dg~i~v~d~~~~~~~~~~~--~~------~~~i-~~~~~~~~~~~l~s~~~d 281 (304)
+++.|+. ...+.+||+.+.+-. ... .. .... .+....+++++++.|+..
T Consensus 610 iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 610 LLIVGGTSPSGLFDRTNSIISLDPLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp EEEECCBCSSCCCCTTTSEEEEETTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred EEEECCccCCCCCCCCCeEEEEECCCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 7777763 346999999876432 111 00 0001 234444566777777754
No 321
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.63 E-value=0.015 Score=45.90 Aligned_cols=152 Identities=12% Similarity=0.132 Sum_probs=83.6
Q ss_pred cccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEE
Q 036585 102 HDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKF 181 (304)
Q Consensus 102 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 181 (304)
-...+.++|.|++.++++--..|.|++++...++.......... . .........|++
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v--~---------------------~~g~~GllGia~ 87 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGV--S---------------------PSGEGGLLGIAL 87 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTC--C---------------------CBTTBSEEEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCce--e---------------------ecCCCCceeeEe
Confidence 34568999999998777765589999998655443211111000 0 012345678999
Q ss_pred ecC---CcEEEEe---eCCCeEEEEEcCCCc--------eeEEEE-eCCCCCCcceEEEEcCCCcEEEEecC--------
Q 036585 182 SND---GRLMLLT---TMEGHIHVLDSFRGT--------LLSTYN-VKPVSRNSTLEASFSPEGMFVISGSG-------- 238 (304)
Q Consensus 182 ~~~---~~~l~~~---~~dg~i~~~d~~~~~--------~~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~~-------- 238 (304)
+|+ +..|++. ..++.|.-|....+. ....+. ........-..+.|.|||.+.++.+.
T Consensus 88 ~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~q 167 (347)
T 3das_A 88 SPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQ 167 (347)
T ss_dssp CTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTT
T ss_pred ccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCcccc
Confidence 985 3344432 234566667655411 111121 11122334567999999987666432
Q ss_pred -----CCcEEEEecCCCce--------eeee-eccCCCCceEEeCCCCcEEEEe
Q 036585 239 -----DGSVHAWSVRSGKE--------VASW-MSFDTEPPVIKWAPGSLMFVTG 278 (304)
Q Consensus 239 -----dg~i~v~d~~~~~~--------~~~~-~~~~~~i~~~~~~~~~~~l~s~ 278 (304)
.|.|.-.+.. ++. ...+ .+|. ....++|+|+|.+.++=
T Consensus 168 d~~~~~G~IlRi~~d-G~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 168 DRKSLGGKILRMTPD-GEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp CTTCSTTCEEEECTT-SSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEE
T ss_pred CCCCCCCEEEEEeCC-CCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEe
Confidence 2445545543 220 1122 2343 45789999988766543
No 322
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.62 E-value=0.0084 Score=47.66 Aligned_cols=106 Identities=10% Similarity=0.105 Sum_probs=60.4
Q ss_pred cEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEec
Q 036585 104 RVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSN 183 (304)
Q Consensus 104 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 183 (304)
....++|.|+++++++ ..+|.|++++ .++........ . ..........++++|
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~---v---------------------~~~g~~~p~gia~~p 84 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELS---V---------------------YHRGESGLLGLALHP 84 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECC---C---------------------CCSTTCSEEEEEECT
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecce---E---------------------eecCCCCceeEEECC
Confidence 4678999999985554 5569999988 33321111100 0 001234567899999
Q ss_pred C---CcEEEEeeC-C-----CeEEEEEcCCCce---eEEEE-eC--CCCCCcceEEEEcCCCcEEEEe
Q 036585 184 D---GRLMLLTTM-E-----GHIHVLDSFRGTL---LSTYN-VK--PVSRNSTLEASFSPEGMFVISG 236 (304)
Q Consensus 184 ~---~~~l~~~~~-d-----g~i~~~d~~~~~~---~~~~~-~~--~~~~~~i~~~~~s~~~~~l~~~ 236 (304)
+ +..|+++.. . +.|..|+...++. ...+. .. .........++|.|||.+.++.
T Consensus 85 df~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 85 RFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp TTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred CCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 8 555555443 2 6788888765421 11111 11 1122234679999999766654
No 323
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.61 E-value=0.005 Score=57.02 Aligned_cols=210 Identities=11% Similarity=0.159 Sum_probs=120.4
Q ss_pred ecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC-ceeeeecccc
Q 036585 23 SMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-NKYSRYFKGH 101 (304)
Q Consensus 23 ~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~-~~~~~~~~~~ 101 (304)
..|..+.||.-. ..++.|+|+++.+.+....... +|.-=.|-.. +.|+..+ +..|+-|++.. ..+++.+..|
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~-~~l~lVT----~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISL-NTVALVT----DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCC-CeeEEEc----CCeEEEeccCCCCccHHHHhcc
Confidence 445667777665 5789999999887776666544 5666666644 4555555 67999999974 3455556555
Q ss_pred ----cccEEEEEEcCCCCEEEEcc-------cCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEec
Q 036585 102 ----HDRVVLLSLCSSKDCFISGS-------LDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVG 170 (304)
Q Consensus 102 ----~~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
...|.....+++.++++..+ ..|.+.+|..+.+.... +..+..... -+.+.
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~-iegha~~F~-----------------~~~~~ 207 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAASFA-----------------QFKME 207 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchh-hhHhHhhhh-----------------eeccC
Confidence 34677788888888776533 35778888876543321 111110000 01111
Q ss_pred CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCC---ceeE-----EEEe-CCCCCCcceEEEEcCCCcEEEEecCCCc
Q 036585 171 GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG---TLLS-----TYNV-KPVSRNSTLEASFSPEGMFVISGSGDGS 241 (304)
Q Consensus 171 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~---~~~~-----~~~~-~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 241 (304)
+...+..-++|..... ..+++++.++... .... .+.. +.....-..++..|+.-..++.-+.-|.
T Consensus 208 ~~~~~~~l~~f~~~~~------~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~ 281 (1630)
T 1xi4_A 208 GNAEESTLFCFAVRGQ------AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY 281 (1630)
T ss_pred CCCCCceEEEEEEecC------CCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCce
Confidence 1112222222221111 1257888877432 1111 1111 1112333446788887778888889999
Q ss_pred EEEEecCCCceeeeeeccCCCC
Q 036585 242 VHAWSVRSGKEVASWMSFDTEP 263 (304)
Q Consensus 242 i~v~d~~~~~~~~~~~~~~~~i 263 (304)
|++||+.++.++..-+-...+|
T Consensus 282 ~~~~d~~t~~~i~~~ris~~~i 303 (1630)
T 1xi4_A 282 IHLYDLETGTCIYMNRISGETI 303 (1630)
T ss_pred EEEEecccchhhhhccccCCce
Confidence 9999999998765543333333
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.54 E-value=0.0095 Score=46.47 Aligned_cols=191 Identities=13% Similarity=0.091 Sum_probs=94.7
Q ss_pred ccCcEEEEeeC----C-------CeEEEEecCCcceee--eecccccceeEEEEccCCCeEEEEecC-----CCCCceEE
Q 036585 25 EVGIYLVTASD----D-------ESIRLYDVTAATCLK--TINSKKYGVDLVCFTSHPTTVIYSSKN-----GWDESLRL 86 (304)
Q Consensus 25 ~~~~~l~~~~~----d-------~~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~-----~~d~~i~v 86 (304)
.++++++.|+. + ..+.+||..+.+-.. .+......- +++. -+++.++.|+.. ..-..+.+
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLF-GLGE-ALNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESC-EEEE-ETTEEEEECCEESSTTCCBCCCEEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhce-eEEE-ECCEEEEEeCCcCCCCCcccceEEE
Confidence 46777888873 1 126778887654321 111111111 2222 256666666631 12356889
Q ss_pred EEccCceeee--ecccccccEEEEEEcCCCCEEEEccc-C-----CeEEEEeCCcceeeceEEEeccceeEecCCCeEEE
Q 036585 87 LSLHDNKYSR--YFKGHHDRVVLLSLCSSKDCFISGSL-D-----RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFG 158 (304)
Q Consensus 87 wd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (304)
||..+++-.. .+........++. -+++.++.|+. + ..+.+||+.+.+-...-..+
T Consensus 122 ~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p--------------- 184 (315)
T 4asc_A 122 YDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQ--------------- 184 (315)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCS---------------
T ss_pred ECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCC---------------
Confidence 9998765322 1211111111222 35667777765 2 35788888766433221100
Q ss_pred ecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCC-----eEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEE
Q 036585 159 YEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEG-----HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 233 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 233 (304)
........+ .-+++.++.|+.++ .+.+||+.+.+....-. .+........+.+ +++++
T Consensus 185 ------------~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~--~~~l~ 247 (315)
T 4asc_A 185 ------------TARSLFGAT--VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA-FPQERSSLSLVSL--VGTLY 247 (315)
T ss_dssp ------------SCCBSCEEE--EETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC-CSSCCBSCEEEEE--TTEEE
T ss_pred ------------CchhceEEE--EECCEEEEEeccCCCCccceEEEEECCCCeEEECCC-CCCcccceeEEEE--CCEEE
Confidence 000111112 22667777776654 58899998775544322 1111222222222 66777
Q ss_pred EEecCC--------------CcEEEEecCCCc
Q 036585 234 ISGSGD--------------GSVHAWSVRSGK 251 (304)
Q Consensus 234 ~~~~~d--------------g~i~v~d~~~~~ 251 (304)
+.|+.+ ..+.+||+.+.+
T Consensus 248 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 248 AIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred EECCccccCcCCccccccccCcEEEecCCCCh
Confidence 777653 237788887654
No 325
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.54 E-value=0.018 Score=44.60 Aligned_cols=100 Identities=8% Similarity=0.039 Sum_probs=55.3
Q ss_pred cccCcEEEEee--CCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCC-----------CCCceEEEEcc
Q 036585 24 MEVGIYLVTAS--DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNG-----------WDESLRLLSLH 90 (304)
Q Consensus 24 ~~~~~~l~~~~--~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~-----------~d~~i~vwd~~ 90 (304)
+.+|.+|+... .++.|...+.+ +.....+.... +--+++++..|+...... ....|+..++.
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~~~----~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSNDT----AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETT-SCSCEEEEEEE----EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EEeCCEEEEEeCCCCceEEEEcCC-CCCCEEccCCc----eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 35666666654 24556666654 33344444322 345578999999887521 02467777777
Q ss_pred CceeeeecccccccEEEEEEcCCCCEEEEcc----cCCeEEEEeCCc
Q 036585 91 DNKYSRYFKGHHDRVVLLSLCSSKDCFISGS----LDRTVLLWDQRA 133 (304)
Q Consensus 91 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~iwd~~~ 133 (304)
.++...... .. +..|+++++.|+-.. ....|...++..
T Consensus 97 g~~~~~l~~---~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG 138 (302)
T 3s25_A 97 GHGSTVLDP---DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG 138 (302)
T ss_dssp SCCCEEEEC---SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTS
T ss_pred CCcceEeec---CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCC
Confidence 665333222 11 225677888777665 334555556553
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.54 E-value=0.021 Score=45.35 Aligned_cols=94 Identities=9% Similarity=0.109 Sum_probs=45.9
Q ss_pred cCcEEEEeeCC-CeEEEEecCC--c--ceeeeec-ccccceeEEEEccCCCeEEEEec-C------CCCCceEEEEccCc
Q 036585 26 VGIYLVTASDD-ESIRLYDVTA--A--TCLKTIN-SKKYGVDLVCFTSHPTTVIYSSK-N------GWDESLRLLSLHDN 92 (304)
Q Consensus 26 ~~~~l~~~~~d-~~i~vw~~~~--~--~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-~------~~d~~i~vwd~~~~ 92 (304)
++++++.|+.+ ..+.++|..+ . +.+..+. ..... .+++. -+++.++.|+. . ..-..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQ-ATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBS-CEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCcc-ceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 66777777643 4688888863 2 2222222 11111 12222 25666666654 1 01246888998876
Q ss_pred eeeee--cc-cccccEEEEEEcCCCCEEEEcccC
Q 036585 93 KYSRY--FK-GHHDRVVLLSLCSSKDCFISGSLD 123 (304)
Q Consensus 93 ~~~~~--~~-~~~~~v~~~~~~~~~~~l~~~~~d 123 (304)
+-... +. .......++. .++++++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 53322 11 1111112222 466677777654
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.49 E-value=0.0089 Score=46.46 Aligned_cols=190 Identities=11% Similarity=0.113 Sum_probs=96.2
Q ss_pred cCcEEEEeeC----C-----CeEEEEecCCcceee--eecccccceeEEEEccCCCeEEEEecCC--CCCceEEEEccCc
Q 036585 26 VGIYLVTASD----D-----ESIRLYDVTAATCLK--TINSKKYGVDLVCFTSHPTTVIYSSKNG--WDESLRLLSLHDN 92 (304)
Q Consensus 26 ~~~~l~~~~~----d-----~~i~vw~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~~~--~d~~i~vwd~~~~ 92 (304)
++.+++.|+. + ..+.+||..+.+-.. .+.........+.+ +++.++.|+..+ .-..+.+||+.+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5667777775 2 357888887654222 12211112222222 666677766421 1246888998876
Q ss_pred eeeee--cccccccEEEEEEcCCCCEEEEcccC-----CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeE
Q 036585 93 KYSRY--FKGHHDRVVLLSLCSSKDCFISGSLD-----RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLD 165 (304)
Q Consensus 93 ~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
+-... +......-.++.+ ++..++.|+.+ ..+.+||+.+.+-...-..+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p---------------------- 203 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMN---------------------- 203 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCS----------------------
T ss_pred eEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCC----------------------
Confidence 53322 2111111122222 56677777654 35778887766433221100
Q ss_pred EEEecCCCCCceEEEEecCCcEEEEeeCC-----CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC-
Q 036585 166 IFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD- 239 (304)
Q Consensus 166 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d- 239 (304)
........+.+ +++.++.|+.+ ..+.+||+.+.+....-.. +........+. -++++++.|+.+
T Consensus 204 -----~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p~~r~~~~~~~--~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 204 -----TIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM-KHRRSALGITV--HQGRIYVLGGYDG 273 (308)
T ss_dssp -----SCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC-SSCCBSCEEEE--ETTEEEEECCBCS
T ss_pred -----CccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC-CCCccceEEEE--ECCEEEEEcCcCC
Confidence 00011122222 67777777654 4699999987765432211 11111222222 267777777644
Q ss_pred ----CcEEEEecCCCc
Q 036585 240 ----GSVHAWSVRSGK 251 (304)
Q Consensus 240 ----g~i~v~d~~~~~ 251 (304)
..+.+||+.+.+
T Consensus 274 ~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 274 HTFLDSVECYDPDTDT 289 (308)
T ss_dssp SCBCCEEEEEETTTTE
T ss_pred CcccceEEEEcCCCCE
Confidence 357888887654
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.48 E-value=0.019 Score=45.05 Aligned_cols=114 Identities=8% Similarity=0.030 Sum_probs=72.3
Q ss_pred CcEEEEeeCCCeEEEEecCCcceeeeecccc-cceeEEEE--ccCCCeEEEE--ecCCCCCceEEEEccCceeeeeccc-
Q 036585 27 GIYLVTASDDESIRLYDVTAATCLKTINSKK-YGVDLVCF--TSHPTTVIYS--SKNGWDESLRLLSLHDNKYSRYFKG- 100 (304)
Q Consensus 27 ~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~-~~v~~~~~--~~~~~~l~~~--~~~~~d~~i~vwd~~~~~~~~~~~~- 100 (304)
+.+++.++.||.|.-+|.++|+.+-+++... .++....- .+.+..++.+ .. ||.|..++..+|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~---dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFG---DGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCST---TTEEEEEETTTEEEEEEEEHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECC---CCEEEEEECCCCcEEeeeccc
Confidence 5688999999999999999999888776541 22222110 0112234443 34 99999999888754433221
Q ss_pred ---ccccEEE---EEE-----cCCCCEEEEcccCCeEEEEeCCcceeeceEEEe
Q 036585 101 ---HHDRVVL---LSL-----CSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQ 143 (304)
Q Consensus 101 ---~~~~v~~---~~~-----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 143 (304)
...++.. ... ...+..+++++.+|.+...|+++++.+..+...
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 1112221 000 013557899999999999999999988877543
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.46 E-value=0.024 Score=44.17 Aligned_cols=188 Identities=14% Similarity=0.176 Sum_probs=92.0
Q ss_pred cEEEEeeCCCeEEEEecCCcceee-eecccccceeEEEEccCCCeEEEEecC----C----CCCceEEEEccCceeeee-
Q 036585 28 IYLVTASDDESIRLYDVTAATCLK-TINSKKYGVDLVCFTSHPTTVIYSSKN----G----WDESLRLLSLHDNKYSRY- 97 (304)
Q Consensus 28 ~~l~~~~~d~~i~vw~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~----~----~d~~i~vwd~~~~~~~~~- 97 (304)
.+++.|+. .+..||..+++-.. .+..........+...++..++.|+.. + ....+.+||..+.+-...
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 44555553 48899988776433 111111122233344567777777731 0 011277888877653322
Q ss_pred -cccccccEEEEEEcCCCCEEEEcccC-------CeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEe
Q 036585 98 -FKGHHDRVVLLSLCSSKDCFISGSLD-------RTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSV 169 (304)
Q Consensus 98 -~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (304)
+.........+.+ ++..++.|+.+ ..+.+||+.+.+-...-..+..
T Consensus 95 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~------------------------ 148 (318)
T 2woz_A 95 PLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK------------------------ 148 (318)
T ss_dssp CBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC------------------------
T ss_pred CCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc------------------------
Confidence 1111111122222 56666666653 2477788776654322110000
Q ss_pred cCCCCCceEEEEecCCcEEEEeeC------CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCC----
Q 036585 170 GGDISDANVVKFSNDGRLMLLTTM------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGD---- 239 (304)
Q Consensus 170 ~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---- 239 (304)
... .+++. .+++.++.|+. -..+.+||+.+.+....-.. +........+. -+++.++.|+.+
T Consensus 149 ---r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~--~~~~iyv~GG~~~~~~ 220 (318)
T 2woz_A 149 ---VYG-HNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM-KTPRSMFGVAI--HKGKIVIAGGVTEDGL 220 (318)
T ss_dssp ---EES-CEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC-SSCCBSCEEEE--ETTEEEEEEEEETTEE
T ss_pred ---ccc-cEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC-CCCcccceEEE--ECCEEEEEcCcCCCCc
Confidence 001 11222 46676777654 24589999988764433211 11112222222 266777777643
Q ss_pred -CcEEEEecCCCc
Q 036585 240 -GSVHAWSVRSGK 251 (304)
Q Consensus 240 -g~i~v~d~~~~~ 251 (304)
..+.+||+.+.+
T Consensus 221 ~~~~~~yd~~~~~ 233 (318)
T 2woz_A 221 SASVEAFDLKTNK 233 (318)
T ss_dssp EEEEEEEETTTCC
T ss_pred cceEEEEECCCCe
Confidence 357789987654
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.44 E-value=0.024 Score=43.89 Aligned_cols=234 Identities=11% Similarity=0.152 Sum_probs=131.8
Q ss_pred CcEEEEee---CCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccc
Q 036585 27 GIYLVTAS---DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHD 103 (304)
Q Consensus 27 ~~~l~~~~---~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 103 (304)
.+|+..-- .+..|.|-|+.++..+.+-. -..-+.-.+|..+.++.-+ ...+.++|+++.+.++.+.- ..
T Consensus 36 DkyicVrE~~~~~~~VvIiDl~n~~~~~Rrp---i~AdsAIMnP~~~ViALra----g~~LQiFnletK~klks~~~-~e 107 (365)
T 2xzh_A 36 DKFICIREKVGEQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA----GKTLQIFNIEMKSKMKAHTM-TD 107 (365)
T ss_dssp TTEEEEEEEETTEEEEEEEETTSTTSCEEEE---CCCSEEEECSSSSEEEEEE----TTEEEEEETTTTEEEEEEEC-SS
T ss_pred CceEEEEecCCCCCEEEEEECCCCCCccccc---cccceeeeCCCccEEEEec----CCeEEEechHHhhhhcceec-CC
Confidence 44555432 22368888888765542211 1223456688888777765 77999999999988888773 45
Q ss_pred cEEEEEEcCCCCEEEEcccCCeEEEEeCCc-ceeeceEEEeccc----e--eEecCCCeEE---Ee------cCCCeEEE
Q 036585 104 RVVLLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLRVQGRP----A--AAYDDQGLVF---GY------EKGPLDIF 167 (304)
Q Consensus 104 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~----~--~~~~~~~~~~---~~------~~~~~~~~ 167 (304)
+|.-=.|-.+. .|+-.+ +..|+.|+++. ..+.+.+..+... + ...+++...+ +. -.|.+.+|
T Consensus 108 ~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 185 (365)
T 2xzh_A 108 DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 185 (365)
T ss_dssp CEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEE
T ss_pred ccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEE
Confidence 66666776544 344333 36799999875 3344444433221 1 2234443222 11 12445555
Q ss_pred EecCCCCCc---eEEEE---ecCC-----cEEEEeeC---CCeEEEEEcCCC---c-----eeEEEEe-CCCCCCcceEE
Q 036585 168 SVGGDISDA---NVVKF---SNDG-----RLMLLTTM---EGHIHVLDSFRG---T-----LLSTYNV-KPVSRNSTLEA 224 (304)
Q Consensus 168 ~~~~~~~~v---~~~~~---~~~~-----~~l~~~~~---dg~i~~~d~~~~---~-----~~~~~~~-~~~~~~~i~~~ 224 (304)
..+...+.. .+.+| -.+| +.|+.+.. .+++++.++... . ....+.. +.....-..++
T Consensus 186 S~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVam 265 (365)
T 2xzh_A 186 SVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 265 (365)
T ss_dssp ETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEE
T ss_pred eecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEE
Confidence 544321110 11222 1121 23333332 268999988432 1 1111111 11223445568
Q ss_pred EEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCC
Q 036585 225 SFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAP 270 (304)
Q Consensus 225 ~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~ 270 (304)
..|+.-..++.-+.-|.|++||+.++.++..-+-...+|..-+-+.
T Consensus 266 qvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~ 311 (365)
T 2xzh_A 266 QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHE 311 (365)
T ss_dssp EEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEG
T ss_pred EecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccC
Confidence 8888778888888999999999999999877665555655444433
No 331
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.43 E-value=0.033 Score=45.94 Aligned_cols=114 Identities=8% Similarity=0.083 Sum_probs=61.8
Q ss_pred ccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEe
Q 036585 103 DRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFS 182 (304)
Q Consensus 103 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 182 (304)
...+.++|.|+|+++++-...+.|++++..++............. .......+..|+|+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~---------------------~~~g~~Gllgia~~ 85 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVN---------------------DADGQNGLLGFAFH 85 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCC---------------------CTTSSCSEEEEEEC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCcccc---------------------ccCCCCceeEEEEC
Confidence 356799999999877765444578888765443322111111000 00123456789999
Q ss_pred cC---CcEEEEeeC-------------CCeEEEEEcCCC--ce---eEEEE-eCCCCCCcceEEEEcCCCcEEEEec
Q 036585 183 ND---GRLMLLTTM-------------EGHIHVLDSFRG--TL---LSTYN-VKPVSRNSTLEASFSPEGMFVISGS 237 (304)
Q Consensus 183 ~~---~~~l~~~~~-------------dg~i~~~d~~~~--~~---~~~~~-~~~~~~~~i~~~~~s~~~~~l~~~~ 237 (304)
|+ +..|+++.. ...|.-|+...+ +. ...+. ...........++|.|||.+.++.+
T Consensus 86 Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 86 PDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 95 445554432 235666665432 11 11121 1112234568899999998766644
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.41 E-value=0.028 Score=43.80 Aligned_cols=192 Identities=11% Similarity=0.060 Sum_probs=92.8
Q ss_pred cccCcEEEEeeC----CC-------eEEEEecCCcceeee--ecccccceeEEEEccCCCeEEEEecCC----CCCceEE
Q 036585 24 MEVGIYLVTASD----DE-------SIRLYDVTAATCLKT--INSKKYGVDLVCFTSHPTTVIYSSKNG----WDESLRL 86 (304)
Q Consensus 24 ~~~~~~l~~~~~----d~-------~i~vw~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~----~d~~i~v 86 (304)
..++.+++.|+. ++ .+.+||..+.+-... +...... .+++. -+++.++.|+... .-..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL-FGLGE-VDDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS-CEEEE-ETTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc-cceEE-ECCEEEEEcCccCCCCcccceEEE
Confidence 345777777773 12 167788776543221 1111111 12222 2666777776510 1145788
Q ss_pred EEccCceeeee--cccccccEEEEEEcCCCCEEEEccc------CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEE
Q 036585 87 LSLHDNKYSRY--FKGHHDRVVLLSLCSSKDCFISGSL------DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFG 158 (304)
Q Consensus 87 wd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (304)
||..+.+-... +......-.++. .+++.++.|+. -..+.+||+.+.+-...-..+
T Consensus 132 yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p--------------- 194 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMK--------------- 194 (318)
T ss_dssp EETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCS---------------
T ss_pred EeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCC---------------
Confidence 88887653322 111111111122 35666677664 235888888776533221100
Q ss_pred ecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCC-----CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEE
Q 036585 159 YEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTME-----GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFV 233 (304)
Q Consensus 159 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 233 (304)
..... .+++. -+++.++.|+.+ ..+.+||+.+.+....-.. +........+. .+++++
T Consensus 195 ------------~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~--~~~~i~ 257 (318)
T 2woz_A 195 ------------TPRSM-FGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF-PQERSSISLVS--LAGSLY 257 (318)
T ss_dssp ------------SCCBS-CEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCC-SSCCBSCEEEE--ETTEEE
T ss_pred ------------CCccc-ceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCC-CCcccceEEEE--ECCEEE
Confidence 00011 11222 256777776543 3578899887664432211 11111222222 356777
Q ss_pred EEecCC--------------CcEEEEecCCCc
Q 036585 234 ISGSGD--------------GSVHAWSVRSGK 251 (304)
Q Consensus 234 ~~~~~d--------------g~i~v~d~~~~~ 251 (304)
+.|+.+ ..+.+||+.+.+
T Consensus 258 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 258 AIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp EECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred EECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 777643 357888887654
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.31 E-value=0.021 Score=45.34 Aligned_cols=58 Identities=10% Similarity=0.056 Sum_probs=30.5
Q ss_pred eEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCC------cEEEEecCCCceeeee
Q 036585 196 HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG------SVHAWSVRSGKEVASW 256 (304)
Q Consensus 196 ~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg------~i~v~d~~~~~~~~~~ 256 (304)
.+.+||+.+.+....-..+ .....-.+ ...++++++.|+.++ .|.++++++++.+...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p-~~r~~~~~--~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELS-QGRAYGVS--LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC---CEEEEECS-SCCBSSEE--EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCCceeeCCCCC-CCccccee--EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 5788998876654433321 22222222 234777888887542 4666788877765443
No 334
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.28 E-value=0.045 Score=43.45 Aligned_cols=68 Identities=15% Similarity=0.117 Sum_probs=45.4
Q ss_pred cceEEEEcC-------CCcEEEEecCCCcEEEEecCCCceeee--e-eccCCCCceEEeCCCCcEEEEec-CceEEecc
Q 036585 220 STLEASFSP-------EGMFVISGSGDGSVHAWSVRSGKEVAS--W-MSFDTEPPVIKWAPGSLMFVTGS-SELSFWIP 287 (304)
Q Consensus 220 ~i~~~~~s~-------~~~~l~~~~~dg~i~v~d~~~~~~~~~--~-~~~~~~i~~~~~~~~~~~l~s~~-~d~~iw~~ 287 (304)
....+.|.. +|+++++.-..+.|...++..++.... + ......+..+++.|||.+.++.. .+.+||.+
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELLKV 350 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEEEE
Confidence 455677753 577777777778888888876544322 2 22345789999999998766544 33777765
No 335
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.28 E-value=0.025 Score=41.16 Aligned_cols=153 Identities=9% Similarity=0.016 Sum_probs=83.1
Q ss_pred cEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEec
Q 036585 104 RVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSN 183 (304)
Q Consensus 104 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 183 (304)
.+..++|+|++.+.++ .+|.++-.+..+.....-+.. ... +=+ ..-..-.++.|.|
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s-~t~-------------------IG~--~Gw~~F~a~~fD~ 97 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGR-AKK-------------------IGN--GGWNQFQFLFFDP 97 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-CEE-------------------EEC--SCGGGCSEEEECT
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCccccccc-ccE-------------------ecc--cccccceEEEECC
Confidence 6679999999986665 678776666544222111100 000 000 0001146789999
Q ss_pred CCcEEEEeeCCCeEEEEEcCCCceeE-----EEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCce------
Q 036585 184 DGRLMLLTTMEGHIHVLDSFRGTLLS-----TYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKE------ 252 (304)
Q Consensus 184 ~~~~l~~~~~dg~i~~~d~~~~~~~~-----~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~------ 252 (304)
+|.+.++ .||.|+-++-.+..... +.. ....-..+..+.|.|+|.+.+.. |+.++-....+...
T Consensus 98 ~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~v-g~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~ 172 (236)
T 1tl2_A 98 NGYLYAV--SKDKLYKASPPQSDTDNWIARATEV-GSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLAR 172 (236)
T ss_dssp TSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEE-ECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHH
T ss_pred CCCEEEe--CCCEEEEeCCCcCCCCceeccccEe-ccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccc
Confidence 9987776 56999888753321110 111 00123567899999999877666 77654333221110
Q ss_pred eeeee-ccCCCCceEEeCCCCcEEEEecCceEEecc
Q 036585 253 VASWM-SFDTEPPVIKWAPGSLMFVTGSSELSFWIP 287 (304)
Q Consensus 253 ~~~~~-~~~~~i~~~~~~~~~~~l~s~~~d~~iw~~ 287 (304)
...+. ..-...+-+.|.|++.+.+.. +.++|..
T Consensus 173 ~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y~~ 206 (236)
T 1tl2_A 173 ATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFYED 206 (236)
T ss_dssp CEEEESSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred cceeccCCcceEEEEEECCCCcEEEEe--CCeEEec
Confidence 11111 112233446799999877776 5556543
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.25 E-value=0.017 Score=42.06 Aligned_cols=67 Identities=1% Similarity=-0.034 Sum_probs=44.0
Q ss_pred cceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccccccc--------EEEEEEcCCCCEEEEcccCCeEEEE
Q 036585 58 YGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDR--------VVLLSLCSSKDCFISGSLDRTVLLW 129 (304)
Q Consensus 58 ~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~dg~i~iw 129 (304)
..+..++|+|++...++ . ++.++-.+..+.+...-+. .... ..++.|.|+|.+.++ .||.|+-+
T Consensus 41 ~~~~~laf~P~G~LYaV--~---~G~Ly~~~~~t~~~~~W~~-s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--L---NDKIYKGTPPTHDNDNWMG-RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKA 112 (236)
T ss_dssp TTCSEEEECTTSCEEEE--E---TTEEEEESCCCSTTCCHHH-HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEE
T ss_pred ccceeEEECCCccEEEE--e---CCeEEEECCCCCCcccccc-cccEecccccccceEEEECCCCCEEEe--CCCEEEEe
Confidence 36789999998886666 4 7777666654432211111 1222 378899999987777 56998887
Q ss_pred eCC
Q 036585 130 DQR 132 (304)
Q Consensus 130 d~~ 132 (304)
+.-
T Consensus 113 ~pP 115 (236)
T 1tl2_A 113 SPP 115 (236)
T ss_dssp SCC
T ss_pred CCC
Confidence 753
No 337
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.24 E-value=0.056 Score=43.71 Aligned_cols=235 Identities=10% Similarity=0.130 Sum_probs=133.7
Q ss_pred CcEEEEee---CCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccc
Q 036585 27 GIYLVTAS---DDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHD 103 (304)
Q Consensus 27 ~~~l~~~~---~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~ 103 (304)
.+|+..-- .+..|.|-|+.++..+..-. -..-+.-.+|..+.++.-. ...+.++|+++.+.++.+.- ..
T Consensus 35 DkyicVrE~~~~~~~vvIiDl~~~~~~~rrp---i~AdsAIMnP~~~iiALra----g~~lQiFnle~K~klks~~~-~e 106 (494)
T 1bpo_A 35 DKFICIREKVGEQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA----GKTLQIFNIEMKSKMKAHTM-TD 106 (494)
T ss_dssp TTEEEEEECCTTCCEEEEEETTSTTSCEEEE---CCCSEEEECSSSSCEEEEE----TTEEEEEETTTTEEEEEEEC-SS
T ss_pred CceEEEEecCCCCCeEEEEECCCCCcceecc---cccceeeeCCCCcEEEEec----CCeEEEEchHHhhhhcceec-CC
Confidence 45555443 23378888888765542211 1233566788888777775 78999999999988887764 34
Q ss_pred cEEEEEEcCCCCEEEEcccCCeEEEEeCCc-ceeeceEEEeccc----ee--EecCCCeEE---Ee------cCCCeEEE
Q 036585 104 RVVLLSLCSSKDCFISGSLDRTVLLWDQRA-EKCQGLLRVQGRP----AA--AYDDQGLVF---GY------EKGPLDIF 167 (304)
Q Consensus 104 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~----~~--~~~~~~~~~---~~------~~~~~~~~ 167 (304)
.|.-=.|-.+. .|+-.+ +..|+.|++.. ..+.+.+..+... ++ ..+++...+ +. -.|.+.+|
T Consensus 107 ~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 184 (494)
T 1bpo_A 107 DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (494)
T ss_dssp CCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEE
T ss_pred CceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEe
Confidence 55555665444 344433 36799999974 3344444433221 12 234444222 11 12455566
Q ss_pred EecC--------CCCCceEEEEec--C-CcEEEEeeC---CCeEEEEEcCCC---c-----eeEEEEe-CCCCCCcceEE
Q 036585 168 SVGG--------DISDANVVKFSN--D-GRLMLLTTM---EGHIHVLDSFRG---T-----LLSTYNV-KPVSRNSTLEA 224 (304)
Q Consensus 168 ~~~~--------~~~~v~~~~~~~--~-~~~l~~~~~---dg~i~~~d~~~~---~-----~~~~~~~-~~~~~~~i~~~ 224 (304)
..+. |-.....+.+.. . .+.|+.+.. .+++++.++... . ....+.. +.....-..++
T Consensus 185 S~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvam 264 (494)
T 1bpo_A 185 SVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 264 (494)
T ss_dssp ESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEE
T ss_pred eccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEE
Confidence 5443 222221222211 1 123444433 378999998532 1 1111111 11223445568
Q ss_pred EEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCC
Q 036585 225 SFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPG 271 (304)
Q Consensus 225 ~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~ 271 (304)
..|+.-..++.-+.-|.|++||+.++.++..-+-...+|..-+-+..
T Consensus 265 qvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~ 311 (494)
T 1bpo_A 265 QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEA 311 (494)
T ss_dssp EEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETT
T ss_pred EecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCC
Confidence 88988888888899999999999999998776655555554444443
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.14 E-value=0.088 Score=44.00 Aligned_cols=105 Identities=12% Similarity=0.053 Sum_probs=65.3
Q ss_pred CceEEEEecCCcEEEEee-CCCeEEEEEcCCC------ce---eEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEE
Q 036585 175 DANVVKFSNDGRLMLLTT-MEGHIHVLDSFRG------TL---LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHA 244 (304)
Q Consensus 175 ~v~~~~~~~~~~~l~~~~-~dg~i~~~d~~~~------~~---~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v 244 (304)
....+..+|||+++++++ .+.++.++|++.- +. ...........-.....+|+++|+-..+---|..|.-
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEE
Confidence 345688999999988865 4779999998742 11 1111111123445566899999965666678999999
Q ss_pred EecCCC----------ceeeeeeccCCCC-----ceEEeCCCCcEEEEec
Q 036585 245 WSVRSG----------KEVASWMSFDTEP-----PVIKWAPGSLMFVTGS 279 (304)
Q Consensus 245 ~d~~~~----------~~~~~~~~~~~~i-----~~~~~~~~~~~l~s~~ 279 (304)
|++... ..+..+.-|-.+- .+=.-.|+|++|++..
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 999653 2344443332211 1112256888888764
No 339
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.03 E-value=0.081 Score=41.74 Aligned_cols=219 Identities=12% Similarity=0.091 Sum_probs=117.4
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcce--eeee----cccccceeEEEEccC---CCeEEEE-ecCCCCCceEE
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAATC--LKTI----NSKKYGVDLVCFTSH---PTTVIYS-SKNGWDESLRL 86 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~--~~~~----~~~~~~v~~~~~~~~---~~~l~~~-~~~~~d~~i~v 86 (304)
++..+.+.++|+++++--..|.|++++..+++. +..+ .........|+++|+ +..|++. +.. .++.|.-
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~-~~~~v~R 111 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA-SDNRIVR 111 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS-SSEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC-CCCEEEE
Confidence 455688999999877766589999998665543 2222 123457889999995 3444443 211 1556666
Q ss_pred EEccCce----------ee-eecc-cccccEEEEEEcCCCCEEEEccc-------------CCeEEEEeCCcce------
Q 036585 87 LSLHDNK----------YS-RYFK-GHHDRVVLLSLCSSKDCFISGSL-------------DRTVLLWDQRAEK------ 135 (304)
Q Consensus 87 wd~~~~~----------~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~------ 135 (304)
|.+..+. .+ ..+. .....-..+.|.|+|.++++.+. .|.|.-.+....-
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 6665421 11 1111 11123456999999987777542 3555555554220
Q ss_pred -eeceEE--EeccceeEecCCCeEEEecCCC---eEEEEecC--C-------------------------CCCceEEEEe
Q 036585 136 -CQGLLR--VQGRPAAAYDDQGLVFGYEKGP---LDIFSVGG--D-------------------------ISDANVVKFS 182 (304)
Q Consensus 136 -~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~-------------------------~~~v~~~~~~ 182 (304)
....+. .....-+++++++.++..+.+. -.+..+.. + ......++|.
T Consensus 192 ~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~ 271 (347)
T 3das_A 192 PGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA 271 (347)
T ss_dssp TTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE
T ss_pred CCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE
Confidence 011222 1223457788888777665543 22222211 0 0122344554
Q ss_pred cCCcEEEEeeCCCeEEEEEcCCCceeEE-EEeCCCCCCcceEEEEcCCCcEEEEec
Q 036585 183 NDGRLMLLTTMEGHIHVLDSFRGTLLST-YNVKPVSRNSTLEASFSPEGMFVISGS 237 (304)
Q Consensus 183 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~ 237 (304)
+|..++..-..+.|....+........ -.........+..++..|||.++++.+
T Consensus 272 -~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 272 -EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp -TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred -cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 355555555556676666655432111 111112346788899999997666543
No 340
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.02 E-value=0.075 Score=41.13 Aligned_cols=202 Identities=7% Similarity=0.024 Sum_probs=110.7
Q ss_pred EeecccCcEEEEeeCC--------------CeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEe--cCCCCCce
Q 036585 21 LQSMEVGIYLVTASDD--------------ESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSS--KNGWDESL 84 (304)
Q Consensus 21 i~~~~~~~~l~~~~~d--------------~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~~~~d~~i 84 (304)
--+.++|++|+-+... ..|+..++...+.. .+... ....|+++++.|+... .. ....|
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~~----~~~~~s~~g~~Iy~~~~~~~-~~~~I 131 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDPD----PCIYASLIGNYIYYLHYDTQ-TATSL 131 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEECS----CEEEEEEETTEEEEEEESSS-SCEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-EeecC----CccEEEEeCCEEEEEeecCC-CCceE
Confidence 3456778888877643 35777777655432 22221 1236788999998876 21 15566
Q ss_pred EEEEccCceeeeecccccccEEEEEEcCCCCEEEEccc-CCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCC
Q 036585 85 RLLSLHDNKYSRYFKGHHDRVVLLSLCSSKDCFISGSL-DRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGP 163 (304)
Q Consensus 85 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
+..++.... ...+..+.. ..++++++.|+-.+. ...|...++..+.....+. +
T Consensus 132 y~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~------------------- 185 (302)
T 3s25_A 132 YRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--C------------------- 185 (302)
T ss_dssp EEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--S-------------------
T ss_pred EEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--C-------------------
Confidence 666766433 333333322 346777777775544 5678887876654432221 0
Q ss_pred eEEEEecCCCCCceEEEEecCCcEEEEeeCC--CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEec--CC
Q 036585 164 LDIFSVGGDISDANVVKFSNDGRLMLLTTME--GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGS--GD 239 (304)
Q Consensus 164 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~--~d 239 (304)
.. ...+.|++.+|+-.... ..|..-++..... ..+. ...+ ..|+|++++|+.++ ..
T Consensus 186 -----------~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt-----~~~~--~~~~~~g~~Iy~~~~~~~ 245 (302)
T 3s25_A 186 -----------NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLT-----EANI--EHYNVYGSLIFYQRGGDN 245 (302)
T ss_dssp -----------CE-EEEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECS-----CSCE--EEEEEETTEEEEEECSSS
T ss_pred -----------Cc-cceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEe-----CCCc--ceEEECCCEEEEEECCCC
Confidence 11 12356888888766543 3677777665442 2222 1222 34788888887653 23
Q ss_pred CcEEEEecCCCceeeeeeccCCCCceEEeCCCCcEEEEec
Q 036585 240 GSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSLMFVTGS 279 (304)
Q Consensus 240 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~s~~ 279 (304)
+.|..-++.. .....+... .+. .+++.+.+++-..
T Consensus 246 ~~i~~~~~DG-~~r~~l~~~--~~~--~i~i~~d~Iy~td 280 (302)
T 3s25_A 246 PALCVVKNDG-TGFKELAKG--EFC--NINVTSQYVYFTD 280 (302)
T ss_dssp CEEEEEETTS-CCCEEEEES--CEE--EEEECSSEEEEEE
T ss_pred cEEEEEECCC-CccEEeeCC--ccc--eEEEeCCEEEEEE
Confidence 5666666643 333333221 222 3344555555444
No 341
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.97 E-value=0.24 Score=46.03 Aligned_cols=247 Identities=10% Similarity=0.018 Sum_probs=134.1
Q ss_pred CcEEEEeeCCCeEEEEecCCc--------ceeeeecccccceeEEEEccC----CCeEEEEecCCCCCceEEEEccCce-
Q 036585 27 GIYLVTASDDESIRLYDVTAA--------TCLKTINSKKYGVDLVCFTSH----PTTVIYSSKNGWDESLRLLSLHDNK- 93 (304)
Q Consensus 27 ~~~l~~~~~d~~i~vw~~~~~--------~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~~~~d~~i~vwd~~~~~- 93 (304)
+.+|+.|+..|.=.+|.+... +.+.++.. -++|..++.... ...+++++..+.+|.+++..-.-+-
T Consensus 337 ~g~lFvgS~~Gds~l~~~~~~~~~~~~~~~~~~~~~N-~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr~Gi~~~ 415 (1158)
T 3ei3_A 337 NGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTN-LGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIH 415 (1158)
T ss_dssp TTEEEEECSSSCEEEEEECSSCCTTSCCEEEEEEECC-CCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEEESBCEE
T ss_pred CCEEEEEEecCCcEEEEEecCCCCccceEEeEeeecC-cCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEecCCCEE
Confidence 448888988887777776533 23344443 358888877542 2467766665568999887543221
Q ss_pred eee--ecccccccEEEEEEc---CCCCEEEEcccCCeEEEEeCCcceeec-----------eE---EEeccceeEecCCC
Q 036585 94 YSR--YFKGHHDRVVLLSLC---SSKDCFISGSLDRTVLLWDQRAEKCQG-----------LL---RVQGRPAAAYDDQG 154 (304)
Q Consensus 94 ~~~--~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~~-----------~~---~~~~~~~~~~~~~~ 154 (304)
... .+. ....++.+... +...+|+.+..+.+ .++.+....... ++ .......+...+++
T Consensus 416 ~~~~~~l~-gv~~iWtl~~~~~~~~~~yLvlS~~~~T-~Vl~i~~e~veev~~~gf~~~~~TL~~~~l~~~~ivQVt~~~ 493 (1158)
T 3ei3_A 416 EHASIDLP-GIKGLWPLRSDPNRETDDTLVLSFVGQT-RVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSAS 493 (1158)
T ss_dssp EEEEECCC-SCCEEEEECCCSSCSSCCEEEEEETTEE-EEEEEETTEEEEECCTTCCSSSCEEEEEEETTTEEEEEESSC
T ss_pred EEEeecCC-CccEEEEEeecCCCCCCCEEEEECCCCe-EEEEEeCCcccccccccccCCCCcEEEEEcCCCeEEEEecCE
Confidence 111 233 23456666543 23457777666655 444442111110 01 11112233344444
Q ss_pred eEEEecCCCeEEEEecCC-CCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCC----
Q 036585 155 LVFGYEKGPLDIFSVGGD-ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPE---- 229 (304)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~---- 229 (304)
..+...+....+..+... ...|...+.+ +.+++.++ ++.+.++.+..++....... .....|.|+++.|.
T Consensus 494 Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvva~-g~~l~~fel~~~~L~~~~~~--~l~~evscl~i~~~~~~~ 568 (1158)
T 3ei3_A 494 VRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVVAV-GRALYYLQIHPQELRQISHT--EMEHEVACLDITPLGDSN 568 (1158)
T ss_dssp EEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEEEE-TTEEEEEEEETTEEEEEEEE--ECSSCEEEEECCCCSSST
T ss_pred EEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEEEE-CCEEEEEEeeCCceeeeccc--CCCCceEEEEeecCCCCc
Confidence 443333222222222222 2345555544 34566664 67888888876653332221 24568999999863
Q ss_pred --CcEEEEecC-CCcEEEEecCCCceeeeeecc-CCCCceEEeC--CCCcEEEEecCc
Q 036585 230 --GMFVISGSG-DGSVHAWSVRSGKEVASWMSF-DTEPPVIKWA--PGSLMFVTGSSE 281 (304)
Q Consensus 230 --~~~l~~~~~-dg~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~--~~~~~l~s~~~d 281 (304)
+++++.|.. |++|+|+++.+.+.+....-. ...+.++.+. ....+|..|-.|
T Consensus 569 ~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~d 626 (1158)
T 3ei3_A 569 GLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGD 626 (1158)
T ss_dssp TCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETT
T ss_pred ccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCC
Confidence 468999986 999999999877665433211 1233444432 234567777666
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.75 E-value=0.2 Score=41.94 Aligned_cols=91 Identities=11% Similarity=0.107 Sum_probs=61.0
Q ss_pred EEEeeCCCeEEEEecCCcceeeeeccc-------------------------ccceeE--EEEc---cCCCeEEEEecCC
Q 036585 30 LVTASDDESIRLYDVTAATCLKTINSK-------------------------KYGVDL--VCFT---SHPTTVIYSSKNG 79 (304)
Q Consensus 30 l~~~~~d~~i~vw~~~~~~~~~~~~~~-------------------------~~~v~~--~~~~---~~~~~l~~~~~~~ 79 (304)
+.+|+..|.|+|+-+.+++.+..+.-. .+..+. +++. .||++|+.-...
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka- 151 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA- 151 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT-
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC-
Confidence 678899999999999998887664210 111222 2332 267778877653
Q ss_pred CCCceEEEEccCceeeeecc-cccccEEEEEEc--CCCCEEEEccc
Q 036585 80 WDESLRLLSLHDNKYSRYFK-GHHDRVVLLSLC--SSKDCFISGSL 122 (304)
Q Consensus 80 ~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~ 122 (304)
+..|...++...++-+.+. .....+..+.|- |+..++++++.
T Consensus 152 -n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e 196 (638)
T 3sbq_A 152 -NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAE 196 (638)
T ss_dssp -TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEEC
T ss_pred -CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecce
Confidence 7788888888776554443 245577888886 67778888765
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.069 Score=41.94 Aligned_cols=116 Identities=8% Similarity=0.116 Sum_probs=71.0
Q ss_pred CeEEEEecCCCCCceEEEEccCceeeeecccc-cccEEEEEEc--C-CCCEEEEc-ccCCeEEEEeCCcceeeceEEEec
Q 036585 70 TTVIYSSKNGWDESLRLLSLHDNKYSRYFKGH-HDRVVLLSLC--S-SKDCFISG-SLDRTVLLWDQRAEKCQGLLRVQG 144 (304)
Q Consensus 70 ~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~ 144 (304)
..+++++. ||.|.-+|..+|+....++.. ..++....-. + ++..++.. +.||.+..++..++.....+....
T Consensus 11 ~~V~v~t~---dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADV---EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEET---TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeC---CCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 35677777 999999999999988777643 1222221110 1 22333343 689999999988875543332211
Q ss_pred cceeEecCCCeEEEecCCCeEEEEecCCCCCceE---EEE-e----cCCcEEEEeeCCCeEEEEEcCCCceeEEEEe
Q 036585 145 RPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANV---VKF-S----NDGRLMLLTTMEGHIHVLDSFRGTLLSTYNV 213 (304)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~-~----~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~ 213 (304)
.. ..+++.. ..+ . ..+..+++|+.+|++.-.|+++|+.+..+..
T Consensus 88 lv-------------------------~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 88 LV-------------------------STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HH-------------------------TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred ce-------------------------eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 10 0001110 000 0 1455789999999999999999999988863
No 344
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.46 E-value=0.43 Score=42.20 Aligned_cols=234 Identities=9% Similarity=0.044 Sum_probs=123.6
Q ss_pred EEEEeeCCCeEEEEecCCcceeeee-cccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEE
Q 036585 29 YLVTASDDESIRLYDVTAATCLKTI-NSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVL 107 (304)
Q Consensus 29 ~l~~~~~d~~i~vw~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~ 107 (304)
+|-.|..+| +..||-.+.+..... ......|.++....++ .|..++. + -+..||..+.+...........|.+
T Consensus 34 ~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g-~lWigT~---~-Gl~~yd~~~~~f~~~~~~~~~~i~~ 107 (758)
T 3ott_A 34 LIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNT-YLYMGTD---N-GILVYNYRADRYEQPETDFPTDVRT 107 (758)
T ss_dssp CEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTT-EEEEEET---T-EEEEEETTTTEECCCSCCCCSCEEE
T ss_pred CEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCC-cEEEEeC---C-CeEEEeCCCCEEECcccCCCceEEE
Confidence 455566777 666774322211111 1123457887776655 5666664 4 4788998876543211112335776
Q ss_pred EEEcCCCCEEEEcccCCeEEEEeCCcceeeceEE----Eec--cceeEecCCCeEEEecCCCeEEEEecC----------
Q 036585 108 LSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLR----VQG--RPAAAYDDQGLVFGYEKGPLDIFSVGG---------- 171 (304)
Q Consensus 108 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 171 (304)
+.. .++ .|..++.+ -+..+|..+.+...... ... ...+..+.++.+.....+.+..++...
T Consensus 108 i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~ 184 (758)
T 3ott_A 108 MAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFEGIPLPV 184 (758)
T ss_dssp EEE-ETT-EEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTEEEEECCCC
T ss_pred EEe-cCC-cEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCceEEecCCC
Confidence 654 345 45555555 57888876654321100 001 112334444444333333333333211
Q ss_pred C----CCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEec
Q 036585 172 D----ISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSV 247 (304)
Q Consensus 172 ~----~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~ 247 (304)
. ...|.++...+++..|.+|+. +-+..+|..+++...... .....|.++...++|.+.+.. .+ -+.+++.
T Consensus 185 ~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~---l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~~~ 258 (758)
T 3ott_A 185 HSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEA---FHNNSIKSLALDGNGDLLAGT-DN-GLYVYHN 258 (758)
T ss_dssp CTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEE---EEEEEEEEEEECTTCCEEEEE-TT-EEEEECC
T ss_pred ccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccC---CCCCeEEEEEEcCCCCEEEEe-CC-ceeEEec
Confidence 0 123677777777766666664 468889987765432222 123468888888888765544 44 4888887
Q ss_pred CCCceeeeee--------ccCCCCceEEeCCCCcEEEEe
Q 036585 248 RSGKEVASWM--------SFDTEPPVIKWAPGSLMFVTG 278 (304)
Q Consensus 248 ~~~~~~~~~~--------~~~~~i~~~~~~~~~~~l~s~ 278 (304)
.+.+.. .+. -....|.++....+|.+.+..
T Consensus 259 ~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT 296 (758)
T 3ott_A 259 DTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQEHNIWLGT 296 (758)
T ss_dssp TTSCCE-EECCCTTCTTSCSCSCEEEEEECTTCCEEEEE
T ss_pred CCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEe
Confidence 665432 221 112347778777777655433
No 345
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.07 E-value=0.49 Score=39.00 Aligned_cols=105 Identities=8% Similarity=-0.004 Sum_probs=60.5
Q ss_pred ceeeEeecccCcEEEEeeCCCeEEEEecCCcce--eeeecc------cccceeEEEEccC---CCeEEEEecC------C
Q 036585 17 SEEILQSMEVGIYLVTASDDESIRLYDVTAATC--LKTINS------KKYGVDLVCFTSH---PTTVIYSSKN------G 79 (304)
Q Consensus 17 ~~~~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~--~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~~------~ 79 (304)
+.-.+.+.++|+++++-...+.|++++..+++. +..+.. .......|+|+|+ +..|++.... +
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 556788999999777765445788887654543 222221 2356779999996 5555555421 0
Q ss_pred C----CCceEEEEccCc-------eeee-ecc-cccccEEEEEEcCCCCEEEEcc
Q 036585 80 W----DESLRLLSLHDN-------KYSR-YFK-GHHDRVVLLSLCSSKDCFISGS 121 (304)
Q Consensus 80 ~----d~~i~vwd~~~~-------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~ 121 (304)
. ...|.-++...+ +.+. .+. ........+.|.|+|.++++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 0 124555554321 1111 121 1123468899999998777643
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.02 E-value=0.36 Score=45.35 Aligned_cols=199 Identities=11% Similarity=0.109 Sum_probs=111.3
Q ss_pred cEEEEeeCCCeEEEEecCC-cceeeeeccc----ccceeEEEEccCCCeEEEEecC----CCCCceEEEEccCceeeeec
Q 036585 28 IYLVTASDDESIRLYDVTA-ATCLKTINSK----KYGVDLVCFTSHPTTVIYSSKN----GWDESLRLLSLHDNKYSRYF 98 (304)
Q Consensus 28 ~~l~~~~~d~~i~vw~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~----~~d~~i~vwd~~~~~~~~~~ 98 (304)
+.|+..+. ..|.-|++.. ..+...+..| ...|..-..+++.++++..+-. ...|.+.+|..+.+. -+.+
T Consensus 117 ~~l~lVT~-~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~i 194 (1630)
T 1xi4_A 117 NTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPI 194 (1630)
T ss_pred CeeEEEcC-CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhh
Confidence 34444433 4699999964 2344444444 3467777888888887765531 236888999887543 3456
Q ss_pred ccccccEEEEEEc--CCCC-EEEEccc---CCeEEEEeCCcc-eeeceEEEeccceeEecCCCeEEEecCCCeEEEEecC
Q 036585 99 KGHHDRVVLLSLC--SSKD-CFISGSL---DRTVLLWDQRAE-KCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGG 171 (304)
Q Consensus 99 ~~~~~~v~~~~~~--~~~~-~l~~~~~---dg~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
.+|.+....+... +... .+..+.. .+.+.|-++... .....+... ..-+.+.| +.
T Consensus 195 egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk-~~~~~~~~-----------------~~ 256 (1630)
T 1xi4_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKK-AVDVFFPP-----------------EA 256 (1630)
T ss_pred hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccc-cccccCCc-----------------cc
Confidence 6776655444443 1112 2222221 267888877543 111111100 00001111 11
Q ss_pred CCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCC
Q 036585 172 DISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRS 249 (304)
Q Consensus 172 ~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~ 249 (304)
...-..++..++.-..+..-+.-|.|++||+.++.++..-+ ....+|...+-+....-++.....|.|.--.+..
T Consensus 257 ~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r---is~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~ 331 (1630)
T 1xi4_A 257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR---ISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (1630)
T ss_pred ccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc---ccCCceEEeccCCCCCceEEEcCCceEEEEEEcc
Confidence 22334567888888888889999999999999998877655 3444554444443333344444666555555443
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.87 E-value=0.83 Score=39.98 Aligned_cols=156 Identities=11% Similarity=0.081 Sum_probs=82.8
Q ss_pred cCCCeEEEEecCC-CCCceEEEEccCceeeeec--------ccccccEEEEEEcC-CCCEEEEcccCC------eEEEEe
Q 036585 67 SHPTTVIYSSKNG-WDESLRLLSLHDNKYSRYF--------KGHHDRVVLLSLCS-SKDCFISGSLDR------TVLLWD 130 (304)
Q Consensus 67 ~~~~~l~~~~~~~-~d~~i~vwd~~~~~~~~~~--------~~~~~~v~~~~~~~-~~~~l~~~~~dg------~i~iwd 130 (304)
.++..++.|+..+ .-..+.+||..+++....- ...... .++...+ ++..++.|+.++ .+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~-hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMC-HTFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBS-CEEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccc-eEEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 4666777776421 1346888898876533221 111111 2233333 677777776532 467788
Q ss_pred CCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCC--eEEEEEcCCCcee
Q 036585 131 QRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEG--HIHVLDSFRGTLL 208 (304)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~~~d~~~~~~~ 208 (304)
+.+.+....-..+ ....-.+.+.-.+++.++.|+.++ .+.+||..+.+..
T Consensus 475 ~~t~~W~~~~~~p----------------------------~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~ 526 (695)
T 2zwa_A 475 MKTREWSMIKSLS----------------------------HTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK 526 (695)
T ss_dssp TTTTEEEECCCCS----------------------------BCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEE
T ss_pred CCCCcEEECCCCC----------------------------CCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceE
Confidence 7765433221100 001112233323778888887654 6999999887643
Q ss_pred EEEEe--CCCCCCcceEEEEcCC-CcEEEEecC--C-----CcEEEEecCCCc
Q 036585 209 STYNV--KPVSRNSTLEASFSPE-GMFVISGSG--D-----GSVHAWSVRSGK 251 (304)
Q Consensus 209 ~~~~~--~~~~~~~i~~~~~s~~-~~~l~~~~~--d-----g~i~v~d~~~~~ 251 (304)
..-.. .+.......++.+..+ ++.++.|+. + +.+.+||+.+.+
T Consensus 527 ~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 527 DVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 32210 1112222334555655 667777765 2 358899998776
No 348
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.46 E-value=1.3 Score=39.24 Aligned_cols=250 Identities=10% Similarity=0.021 Sum_probs=130.5
Q ss_pred cCcEEEEeeCCCeEEEEecCCcceeee-ecc----cccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeeccc
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCLKT-INS----KKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKG 100 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~ 100 (304)
+|.+.+ ++.+| +..++..+++.... ... ....|.++...+++..|..++ ++-+..+|..+++.......
T Consensus 156 ~g~lWi-gt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt----~~Gl~~~~~~~~~~~~~~~l 229 (758)
T 3ott_A 156 DNQIYV-GTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT----EGYLFQYFPSTGQIKQTEAF 229 (758)
T ss_dssp TCCEEE-EETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE----EEEEEEEETTTTEEEEEEEE
T ss_pred CCCEEE-EeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEE----CCCCeEEcCCCCeEEeccCC
Confidence 454444 44444 77788766543221 111 112477888777777677776 34577888877653322111
Q ss_pred ccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEE---------eccceeEecCCCeEEEecCCCeEEEEec-
Q 036585 101 HHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRV---------QGRPAAAYDDQGLVFGYEKGPLDIFSVG- 170 (304)
Q Consensus 101 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 170 (304)
....|.++...+++.+.+. +. +-+.+++..+.+....... .....+..+.++.+.......+.+....
T Consensus 230 ~~~~i~~i~~d~~g~lWig-T~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~Gl~~~~~~~ 307 (758)
T 3ott_A 230 HNNSIKSLALDGNGDLLAG-TD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYGISLSRYNS 307 (758)
T ss_dssp EEEEEEEEEECTTCCEEEE-ET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSSEEEECCCC
T ss_pred CCCeEEEEEEcCCCCEEEE-eC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCcccccccCC
Confidence 2346888888777765554 44 4577888766543211110 0111233444443332222233322111
Q ss_pred -------------CCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCce--eEEEEeC----CCCCCcceEEEEcCCCc
Q 036585 171 -------------GDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL--LSTYNVK----PVSRNSTLEASFSPEGM 231 (304)
Q Consensus 171 -------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~----~~~~~~i~~~~~s~~~~ 231 (304)
.....|.++.-.++|. |.+|+.+| +..++..+++. ...+... ......|.++.-.++|+
T Consensus 308 ~~~~~~~~~~~~~~~~~~v~~i~~D~~g~-lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~ 385 (758)
T 3ott_A 308 ALQFIPISQITGTGDGNQFYSLFRDSKGF-YWFGGANG-LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYEDKEQQ 385 (758)
T ss_dssp -CEEEEHHHHSCSCCCCBEEEEEECTTCC-EEEEETTE-EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEECTTSC
T ss_pred ceeEEecccCCCCCCCceEEEEEEcCCCC-EEEeeCCc-ceeecccccccceeEEeccCCcCCCCCCCceEEEEECCCCC
Confidence 0123567777777776 44555554 66676554321 1222210 01234578888888876
Q ss_pred EEEEecCCCcEEEEecCCCceeeee-ec-----cCCCCceEEeCCCCcEEEEecC-ceEEecc
Q 036585 232 FVISGSGDGSVHAWSVRSGKEVASW-MS-----FDTEPPVIKWAPGSLMFVTGSS-ELSFWIP 287 (304)
Q Consensus 232 ~l~~~~~dg~i~v~d~~~~~~~~~~-~~-----~~~~i~~~~~~~~~~~l~s~~~-d~~iw~~ 287 (304)
+.+ |+. +-|..||.++++...-. .. ....|.++.-.+++.+.+.... .+..++.
T Consensus 386 lWi-gt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~~~ 446 (758)
T 3ott_A 386 LWI-ATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVVDK 446 (758)
T ss_dssp EEE-EET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEEEH
T ss_pred EEE-EeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEEcc
Confidence 544 443 46999998776542211 11 1235778887777776554433 3666654
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.55 E-value=1.7 Score=35.93 Aligned_cols=107 Identities=7% Similarity=-0.035 Sum_probs=59.2
Q ss_pred ceeeEeecccCc-EEEEeeCCCeEEEEecCCcc---eeeeec---------ccccceeEEEEccC----CCeEEEEecCC
Q 036585 17 SEEILQSMEVGI-YLVTASDDESIRLYDVTAAT---CLKTIN---------SKKYGVDLVCFTSH----PTTVIYSSKNG 79 (304)
Q Consensus 17 ~~~~i~~~~~~~-~l~~~~~d~~i~vw~~~~~~---~~~~~~---------~~~~~v~~~~~~~~----~~~l~~~~~~~ 79 (304)
++-.+.+.|+|. .|+++...|.|++++..... .+..+. ........|+|+|+ +...++-+...
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 556788999986 56666788999999754221 222221 11356788999996 33333322210
Q ss_pred CC----------CceEEEEccCc----------eeeeecc--cccccEEEEEEcCCCCEEEEcccCC
Q 036585 80 WD----------ESLRLLSLHDN----------KYSRYFK--GHHDRVVLLSLCSSKDCFISGSLDR 124 (304)
Q Consensus 80 ~d----------~~i~vwd~~~~----------~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg 124 (304)
+ ..|.-|.+..+ +.+..+. ........|.|.|||.+.++.+..+
T Consensus 95 -~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 -ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp -CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred -CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 13444555321 1222221 1122457899999998777655433
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.27 E-value=1 Score=37.17 Aligned_cols=107 Identities=14% Similarity=0.198 Sum_probs=59.1
Q ss_pred CCceEEEEecCCc-EEEEeeCCCeEEEEEcCCCc---eeEEEE--eCC----CCCCcceEEEEcCC----CcEEEEec--
Q 036585 174 SDANVVKFSNDGR-LMLLTTMEGHIHVLDSFRGT---LLSTYN--VKP----VSRNSTLEASFSPE----GMFVISGS-- 237 (304)
Q Consensus 174 ~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~---~~~~~~--~~~----~~~~~i~~~~~s~~----~~~l~~~~-- 237 (304)
.....|+|.|+|. .|+++...|.|++++..... .+..+. ... ........++|+|+ +.+.++-+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3557799999996 56677789999999753221 111111 000 11456788999996 33333222
Q ss_pred CC----------CcEEEEecCCC----------ceeeeee--ccCCCCceEEeCCCCcEEEEecC
Q 036585 238 GD----------GSVHAWSVRSG----------KEVASWM--SFDTEPPVIKWAPGSLMFVTGSS 280 (304)
Q Consensus 238 ~d----------g~i~v~d~~~~----------~~~~~~~--~~~~~i~~~~~~~~~~~l~s~~~ 280 (304)
.+ ..|.-|.+..+ +.+..+. .....-..|+|.|||.+.++.++
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 11 13444555321 1222222 11223578999999987666543
No 351
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.26 E-value=1.4 Score=33.68 Aligned_cols=104 Identities=10% Similarity=0.018 Sum_probs=51.7
Q ss_pred eEeecccCcEEEEeeCCCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecc
Q 036585 20 ILQSMEVGIYLVTASDDESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFK 99 (304)
Q Consensus 20 ~i~~~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~ 99 (304)
+.....-....+.-. ||.|..|-....-.+-.-......|..++.... +.+.. . ||.|+.|-....-.+..-.
T Consensus 26 i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~--hs~~l-~---~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 26 VDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNY--HSLAL-K---DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp CCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSS--EEEEE-E---TTEEEEEECCTTSTTCCCG
T ss_pred CcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCC--EEEEE-E---CCEEEEeeCCCCCCCCCCc
Confidence 333333333333335 899999976542221111111235666665332 22223 3 7888888655422111111
Q ss_pred cccccEEEEEEcCCCCEEEEcccCCeEEEEeCCc
Q 036585 100 GHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRA 133 (304)
Q Consensus 100 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 133 (304)
.-...|..++...+- .+.-. ||.|+.|-...
T Consensus 99 ~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~ 129 (282)
T 3qhy_B 99 EARSGVDAIAAGAWA--SYALK-DGKVIAWGDDS 129 (282)
T ss_dssp GGSSSEEEEEEETTE--EEEEE-TTEEEEEECCT
T ss_pred ccCCCeEEEECcCCE--EEEEe-CCeEEEecCCC
Confidence 113467777765443 33334 89999997544
No 352
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=91.98 E-value=3.2 Score=31.52 Aligned_cols=162 Identities=10% Similarity=0.025 Sum_probs=88.9
Q ss_pred cceeEEEEccCCCeEEEEecCCCCCceEEE---EccCceeeeecccccccEEEEEEcC-CCCEEEEcccCCeEEEEeCCc
Q 036585 58 YGVDLVCFTSHPTTVIYSSKNGWDESLRLL---SLHDNKYSRYFKGHHDRVVLLSLCS-SKDCFISGSLDRTVLLWDQRA 133 (304)
Q Consensus 58 ~~v~~~~~~~~~~~l~~~~~~~~d~~i~vw---d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~ 133 (304)
+.+..+........|+..+. .|.++-- ++........+. ....|..+.... +..+++..+.+|.++...+..
T Consensus 24 D~~~~~~~~~t~~~ll~fT~---~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSN---RGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp CCEEEEEEEETTSCEEEEET---TSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGG
T ss_pred CeEEEEEEECCCCEEEEEcC---CCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHH
Confidence 34555555555556666665 7766643 333222111133 345666664421 467899999999999988765
Q ss_pred ceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCC-------c
Q 036585 134 EKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG-------T 206 (304)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~-------~ 206 (304)
.. ... .+...+.+. ....+..+........++..+..|.+..+....- +
T Consensus 100 ~~-~~~---~G~~~i~lk--------------------egD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~ 155 (276)
T 3no0_A 100 FE-YKA---QGMPIIKLT--------------------EGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGAR 155 (276)
T ss_dssp TT-TCS---TTEECSCCC--------------------TTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCC
T ss_pred hh-hhc---CCeEEEecC--------------------CCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCC
Confidence 43 110 111111111 1123333444445557888888898888875321 1
Q ss_pred eeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCC
Q 036585 207 LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRS 249 (304)
Q Consensus 207 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~ 249 (304)
-...+.. .....+..+...+++.+++..+..|.++...+..
T Consensus 156 Gv~~i~L--~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e 196 (276)
T 3no0_A 156 GVQGIKL--EKNDETSGLRIWNGEPYLLVITAKGRVKKISHEE 196 (276)
T ss_dssp CEECCCC--CTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGG
T ss_pred CEEEEcc--CCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHH
Confidence 1111111 1335566655555666888888999999888754
No 353
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.81 E-value=1.1 Score=40.91 Aligned_cols=38 Identities=13% Similarity=0.085 Sum_probs=32.3
Q ss_pred CcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeee
Q 036585 219 NSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASW 256 (304)
Q Consensus 219 ~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 256 (304)
..+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 35667778888899999999999999999999887664
No 354
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=91.52 E-value=4.5 Score=32.33 Aligned_cols=183 Identities=7% Similarity=0.062 Sum_probs=100.6
Q ss_pred ceEEEEccCc--eeeeeccc------ccccEEEEEEc---CC----CCEEEEc-ccCCeEEEEeCCcceeeceEEEeccc
Q 036585 83 SLRLLSLHDN--KYSRYFKG------HHDRVVLLSLC---SS----KDCFISG-SLDRTVLLWDQRAEKCQGLLRVQGRP 146 (304)
Q Consensus 83 ~i~vwd~~~~--~~~~~~~~------~~~~v~~~~~~---~~----~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~ 146 (304)
.|.+||+.++ +.++.+.- ....+..+.+. |+ +.+++.+ +....|.++|+.+++..+....
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~---- 199 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHP---- 199 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECG----
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccC----
Confidence 5788999998 87766542 23457777777 22 2343333 3467899999999887765521
Q ss_pred eeEecCC-CeEEEecCCCeEEEEecCCCCCceEEEEecC----CcEEEEeeCCC-eEEEEE---cCCCc---eeEEEEeC
Q 036585 147 AAAYDDQ-GLVFGYEKGPLDIFSVGGDISDANVVKFSND----GRLMLLTTMEG-HIHVLD---SFRGT---LLSTYNVK 214 (304)
Q Consensus 147 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~dg-~i~~~d---~~~~~---~~~~~~~~ 214 (304)
. +.++ ...+......+. + ...+..|+++|+ ++.|......+ .++-.. +++.. .+..+-.
T Consensus 200 ~--~~pd~~~~~~i~G~~~~-~-----~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~- 270 (381)
T 3q6k_A 200 T--FKAERPTKFDYGGKEYE-F-----KAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGN- 270 (381)
T ss_dssp G--GSCCSCEEEEETTEEEE-E-----CCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEE-
T ss_pred C--CccccCcceEECCEEeE-e-----ccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeee-
Confidence 1 1111 111111111111 1 246888999998 77777776655 333332 22222 1222221
Q ss_pred CCCCCcceEEEEc-CCCcEEEEecCCCcEEEEecCC-C---ceeeeeec--cCCCCceEEeCCCCcEEEEe
Q 036585 215 PVSRNSTLEASFS-PEGMFVISGSGDGSVHAWSVRS-G---KEVASWMS--FDTEPPVIKWAPGSLMFVTG 278 (304)
Q Consensus 215 ~~~~~~i~~~~~s-~~~~~l~~~~~dg~i~v~d~~~-~---~~~~~~~~--~~~~i~~~~~~~~~~~l~s~ 278 (304)
.+....-..++++ .+|.++++--..+.|..|+..+ . +....+.. .-..+..+.+.++|.+.+..
T Consensus 271 kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 271 RGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred cCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 1112334456776 6788777777888999999865 1 12233321 11235667776676544443
No 355
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=91.21 E-value=4.8 Score=32.14 Aligned_cols=177 Identities=7% Similarity=0.023 Sum_probs=92.3
Q ss_pred eEEEEecCCc--ceeeeeccc------ccceeEEEEc---cC---CCeEEEEecCCCCCceEEEEccCceeeeecccc--
Q 036585 38 SIRLYDVTAA--TCLKTINSK------KYGVDLVCFT---SH---PTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGH-- 101 (304)
Q Consensus 38 ~i~vw~~~~~--~~~~~~~~~------~~~v~~~~~~---~~---~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~-- 101 (304)
.|.+||+.++ +.++++.-. ...+..+.+. |. +...+..+..+ ...|.|+|+.+++.-+.+..+
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~-~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFL-RGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETT-TTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCC-CCcEEEEECCCCcEEEEccCCCc
Confidence 5889999999 888877643 2457778877 22 13444444322 788999999988755443110
Q ss_pred ----------------cccEEEEEEcCC----CCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecC
Q 036585 102 ----------------HDRVVLLSLCSS----KDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEK 161 (304)
Q Consensus 102 ----------------~~~v~~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (304)
...+..++++|+ ++.|+-....+ -++|.+.+...... . ..
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~------~-------------~~ 262 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQK------G-------------GK 262 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSST------T-------------CC
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCc------c-------------hh
Confidence 134566667665 44444433322 12222221110000 0 01
Q ss_pred CCeEEEEecCCCCCceEEEEe-cCCcEEEEeeCCCeEEEEEcCC-C---ceeEEEEeCCCCCCcceEEEEcCCCcEEEEe
Q 036585 162 GPLDIFSVGGDISDANVVKFS-NDGRLMLLTTMEGHIHVLDSFR-G---TLLSTYNVKPVSRNSTLEASFSPEGMFVISG 236 (304)
Q Consensus 162 ~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~~~d~~~-~---~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 236 (304)
..++.+--.+....-..+++. .+|.++++--....|..|+..+ . +....+...+ .-.....+.+.++|.+.+..
T Consensus 263 ~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 263 LNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEE
T ss_pred hceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCCeEEEEE
Confidence 111111111112233456775 6788777777888999999865 1 2223333222 33345666666665544433
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=90.98 E-value=0.68 Score=43.12 Aligned_cols=37 Identities=11% Similarity=0.053 Sum_probs=31.0
Q ss_pred cceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeee
Q 036585 220 STLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASW 256 (304)
Q Consensus 220 ~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 256 (304)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4455667788899999999999999999999887664
No 357
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=90.96 E-value=4.7 Score=31.50 Aligned_cols=194 Identities=9% Similarity=0.043 Sum_probs=105.7
Q ss_pred CcEEEEeeCCCeEEEEecCCcc---------eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEc---cC---
Q 036585 27 GIYLVTASDDESIRLYDVTAAT---------CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSL---HD--- 91 (304)
Q Consensus 27 ~~~l~~~~~d~~i~vw~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~---~~--- 91 (304)
...+++.+.+|.|+--.+.+-+ .-..++. .+.+..+........++..+. .|.++-... ..
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke-~D~~~~~~~~~t~d~ll~fT~---~Gr~y~~~~~~lp~~~r 78 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQ-DDIVAHFFVCSTHDLILFFTT---QGRVYRAKAYDLPEASR 78 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCCCG-GGCEEEEEEEETTSEEEEEET---TSEEEEEEGGGSCBCCS
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCC-CCEEEEEEEeCCCCEEEEEeC---CCeEEEEEHHHCcCCCc
Confidence 3567888889988876543211 1112222 234555555555556666665 676655443 22
Q ss_pred ---ceeeeecc--cccccEEEEEEcC---CCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCC
Q 036585 92 ---NKYSRYFK--GHHDRVVLLSLCS---SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGP 163 (304)
Q Consensus 92 ---~~~~~~~~--~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (304)
|.++..+- .....|.++...+ +..+++..+.+|.++.-.+........ .+...+.+.
T Consensus 79 ~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r---~G~~~i~lk------------ 143 (327)
T 3uc1_A 79 TARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS---GGIVAVNLR------------ 143 (327)
T ss_dssp SSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS---SCEESCBCC------------
T ss_pred cCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc---CceEEEEEC------------
Confidence 22221111 1234555554433 467999999999999988765443221 111111111
Q ss_pred eEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcC--CCce-------eEEEEeCCCCCCcceEEEEcCCCcEEE
Q 036585 164 LDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSF--RGTL-------LSTYNVKPVSRNSTLEASFSPEGMFVI 234 (304)
Q Consensus 164 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~--~~~~-------~~~~~~~~~~~~~i~~~~~s~~~~~l~ 234 (304)
....+..+........++..+..|.+..+... .-.. ...+.. .....|.++...+++.+++
T Consensus 144 --------e~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L--~~~d~Vv~~~~~~~~~~ll 213 (327)
T 3uc1_A 144 --------DNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRF--NIDDRLLSLNVVREGTYLL 213 (327)
T ss_dssp --------TTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCC--CTTCCEEEEEECCTTCEEE
T ss_pred --------CCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecC--CCCCEEEEEEEECCCCEEE
Confidence 11233334444455667778888888887765 2111 111111 1345566666656667888
Q ss_pred EecCCCcEEEEecCC
Q 036585 235 SGSGDGSVHAWSVRS 249 (304)
Q Consensus 235 ~~~~dg~i~v~d~~~ 249 (304)
..+..|.++.-.+..
T Consensus 214 ~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 214 VATSGGYAKRTAIEE 228 (327)
T ss_dssp EEETTSEEEEEEGGG
T ss_pred EEeCCCcEEEEEHHH
Confidence 888999998887654
No 358
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=90.86 E-value=4.8 Score=31.44 Aligned_cols=104 Identities=12% Similarity=0.047 Sum_probs=67.1
Q ss_pred cCcEEEEeeCCCeEEEEecCCcc-------eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEcc--Cc----
Q 036585 26 VGIYLVTASDDESIRLYDVTAAT-------CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH--DN---- 92 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~--~~---- 92 (304)
+..++++.+.+|.++.-.+.... ....+... +.+..+........++..+. .|.+..+... .-
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d~ill~T~---~G~~~rf~~~~~eip~~g 183 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGDDLLLVSA---NGQSIRFSATDEALRPMG 183 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTCEEEEEET---TSEEEEEECCTTTSCCCC
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCCEEEEEEC---CCeEEEEECcccccCcCC
Confidence 46799999999999988765422 22234333 34555555555667777777 8888888776 21
Q ss_pred -----eeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcc
Q 036585 93 -----KYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAE 134 (304)
Q Consensus 93 -----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 134 (304)
.....+. ..+.|.++...+++.+++..+..|.++.-.+...
T Consensus 184 r~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~ 229 (327)
T 3uc1_A 184 RATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEY 229 (327)
T ss_dssp TTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGS
T ss_pred cCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHc
Confidence 1111222 3456777766666678888889999888776543
No 359
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=89.57 E-value=10 Score=33.29 Aligned_cols=232 Identities=11% Similarity=0.058 Sum_probs=114.1
Q ss_pred ecccCcEEEEe-eCCC----eEEEEecCCcceee-eeccccc--------ceeEEEEccCCCeEEEEec--------CCC
Q 036585 23 SMEVGIYLVTA-SDDE----SIRLYDVTAATCLK-TINSKKY--------GVDLVCFTSHPTTVIYSSK--------NGW 80 (304)
Q Consensus 23 ~~~~~~~l~~~-~~d~----~i~vw~~~~~~~~~-~~~~~~~--------~v~~~~~~~~~~~l~~~~~--------~~~ 80 (304)
+++++++++.+ |..| .++++|+.+++.+. .+. ... ....++|. +...++.+.. .++
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~~~~~~ 214 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEITSSLY 214 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCBCTTSS
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEE-CCCEEEEEeCCCCCCcCcCCC
Confidence 77888876654 3333 59999999988763 222 111 12345886 4445554421 123
Q ss_pred CCceEEEEccCce--eeeecccccccE-EEEEEcCCCC-----EEEEcc---cCCeEEEEeCCccee-eceEEEecccee
Q 036585 81 DESLRLLSLHDNK--YSRYFKGHHDRV-VLLSLCSSKD-----CFISGS---LDRTVLLWDQRAEKC-QGLLRVQGRPAA 148 (304)
Q Consensus 81 d~~i~vwd~~~~~--~~~~~~~~~~~v-~~~~~~~~~~-----~l~~~~---~dg~i~iwd~~~~~~-~~~~~~~~~~~~ 148 (304)
...|+.|.+-+.. -...+.+....+ .....+++++ .+++.+ ....+.+.|...... ...+..+
T Consensus 215 ~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----- 289 (711)
T 4hvt_A 215 PNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMP----- 289 (711)
T ss_dssp BCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSC-----
T ss_pred CCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecC-----
Confidence 4678888776542 122333222222 3344455555 233322 123445555432111 0111000
Q ss_pred EecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEe----------eCCCeEEEEEcCCCc-------eeEEE
Q 036585 149 AYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLT----------TMEGHIHVLDSFRGT-------LLSTY 211 (304)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~----------~~dg~i~~~d~~~~~-------~~~~~ 211 (304)
.. ..+..+.++.+++.. ...+.|...|+.++. ....+
T Consensus 290 -------------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 343 (711)
T 4hvt_A 290 -------------------------SD-ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKIL 343 (711)
T ss_dssp -------------------------TT-CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEE
T ss_pred -------------------------Cc-ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEE
Confidence 00 112233445444422 246778889887642 12222
Q ss_pred EeCCCCCCcceEEEEcCCCcEEEEecCCC--cEEEEecCCCc-eeee-eecc-CCCCceEEeCCCCc-EEEEecCc---e
Q 036585 212 NVKPVSRNSTLEASFSPEGMFVISGSGDG--SVHAWSVRSGK-EVAS-WMSF-DTEPPVIKWAPGSL-MFVTGSSE---L 282 (304)
Q Consensus 212 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~i~v~d~~~~~-~~~~-~~~~-~~~i~~~~~~~~~~-~l~s~~~d---~ 282 (304)
- .+.....+..+.+..+ .++++...++ .|+++|+.+++ .... +... .+.+.....++++. ++++.+.. -
T Consensus 344 ~-~~~~~~~l~~~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~ 421 (711)
T 4hvt_A 344 F-TPTANEVFNFISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPP 421 (711)
T ss_dssp E-CCCTTEEEEEEEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCC
T ss_pred E-CCCCCCeEEEEEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCC
Confidence 2 2234556778888876 4666666665 47788876664 2233 2211 24566666667664 44444333 5
Q ss_pred EEeccCC
Q 036585 283 SFWIPDL 289 (304)
Q Consensus 283 ~iw~~~~ 289 (304)
.+|.++.
T Consensus 422 ~~~~~d~ 428 (711)
T 4hvt_A 422 TIYLWVK 428 (711)
T ss_dssp EEEEECT
T ss_pred EEEEEeC
Confidence 5555543
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=87.34 E-value=8.7 Score=29.74 Aligned_cols=196 Identities=7% Similarity=0.064 Sum_probs=108.1
Q ss_pred cccCcEEEEeeCCCeEEEEecCCcce-------e--eeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC---
Q 036585 24 MEVGIYLVTASDDESIRLYDVTAATC-------L--KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD--- 91 (304)
Q Consensus 24 ~~~~~~l~~~~~d~~i~vw~~~~~~~-------~--~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~--- 91 (304)
.++..++++.+.+|.|+--.+..-+. + ..+... +.+..+........++..+. .|.++-+....
T Consensus 5 i~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~---~G~~~~~~~~~ip~ 80 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISN---EGKLYLINAYEIKD 80 (312)
T ss_dssp ---CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEET---TSEEEEEEGGGSCC
T ss_pred cCCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEEC---CCeEEEEEHHHCCC
Confidence 35677899999999999876653221 1 122222 34445555555666777776 78777665532
Q ss_pred ------ceee---eecccccccEEEEEEcC---CCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEe
Q 036585 92 ------NKYS---RYFKGHHDRVVLLSLCS---SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGY 159 (304)
Q Consensus 92 ------~~~~---~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (304)
|.++ ..+. ..+.|.++...+ +..+++..+..|.++...+....... ..+...+
T Consensus 81 ~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r---~~G~~~i----------- 145 (312)
T 1suu_A 81 SSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVK---SRGVIVI----------- 145 (312)
T ss_dssp -------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC-------CEECB-----------
T ss_pred CCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccC---CCcEEEE-----------
Confidence 1111 1122 223455554332 45678888999999988876543221 1111111
Q ss_pred cCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCC----c---eeEEEEeCCCCCCcceEEEEcCCCcE
Q 036585 160 EKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRG----T---LLSTYNVKPVSRNSTLEASFSPEGMF 232 (304)
Q Consensus 160 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~----~---~~~~~~~~~~~~~~i~~~~~s~~~~~ 232 (304)
.+.. ...+..+.....+..++..+.+|.+..+....- + -...+.. .....+..+..-+++..
T Consensus 146 --------~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L--~~~d~vv~~~~v~~~~~ 214 (312)
T 1suu_A 146 --------KLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKL--KEGDLFVKVLSVKENPY 214 (312)
T ss_dssp --------CCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCC--CTTCCEEEEEECTTCSE
T ss_pred --------ecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEe--CCCCEEEEEEEECCCCe
Confidence 1111 233444444444567888899999988886431 1 1111221 12445566655555667
Q ss_pred EEEecCCCcEEEEecCC
Q 036585 233 VISGSGDGSVHAWSVRS 249 (304)
Q Consensus 233 l~~~~~dg~i~v~d~~~ 249 (304)
+++.+..|..+..++..
T Consensus 215 l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 215 LLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEETTSEEEEEEGGG
T ss_pred EEEEECCCceEEEEHHH
Confidence 88888899988888754
No 361
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=85.61 E-value=4.3 Score=34.65 Aligned_cols=59 Identities=22% Similarity=0.282 Sum_probs=41.9
Q ss_pred ceEEEEecCCcEEEEeeCC------------CeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEe
Q 036585 176 ANVVKFSNDGRLMLLTTME------------GHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 236 (304)
Q Consensus 176 v~~~~~~~~~~~l~~~~~d------------g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 236 (304)
.-.|+|+|.|.++++-..+ ..+.+.+..+++...-+.. .....++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~--P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG--PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC--CTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC--CCCccCcCeeECCCCCEEEEE
Confidence 3568999999866553321 3466777777776665553 256789999999999988765
No 362
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=85.02 E-value=9.7 Score=34.77 Aligned_cols=37 Identities=22% Similarity=0.240 Sum_probs=31.7
Q ss_pred ceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeec
Q 036585 59 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYF 98 (304)
Q Consensus 59 ~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~ 98 (304)
.+.+++..++..++++.+. |+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~---D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSL---DYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEET---TCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEEC---CCEEEEEECCCCCeEeee
Confidence 4677788888889999998 999999999999877653
No 363
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=84.89 E-value=4.5 Score=34.27 Aligned_cols=61 Identities=16% Similarity=0.171 Sum_probs=42.4
Q ss_pred cceEEEEcCCCcEEEEecC------------CCcEEEEecCCCceeeeeecc-CCCCceEEeCCCCcEEEEecC
Q 036585 220 STLEASFSPEGMFVISGSG------------DGSVHAWSVRSGKEVASWMSF-DTEPPVIKWAPGSLMFVTGSS 280 (304)
Q Consensus 220 ~i~~~~~s~~~~~l~~~~~------------dg~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~s~~~ 280 (304)
....|.|+++|.+.++... .+.|..++..+++....+... ...++.++|+||++.|+.+-.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 4557999999987774322 225777777777765555433 356899999999998887643
No 364
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=84.02 E-value=15 Score=29.32 Aligned_cols=108 Identities=12% Similarity=0.048 Sum_probs=65.3
Q ss_pred ecccCcEEEEeeCCCeEEEEecCC---------cceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC--
Q 036585 23 SMEVGIYLVTASDDESIRLYDVTA---------ATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-- 91 (304)
Q Consensus 23 ~~~~~~~l~~~~~d~~i~vw~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~-- 91 (304)
..++..++++.+.+|.|+--.+.+ +.....++. ...+..+........++..+. .|.++-+....
T Consensus 3 lI~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~t~d~ll~fT~---~G~~~~~~~~eip 78 (370)
T 3l6v_A 3 LIAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVNTHDTLLTFTS---SGKVFWLPVHQLP 78 (370)
T ss_dssp CCCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEECTTCEEEEEET---TSEEEEEEGGGSC
T ss_pred cccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEecCCCEEEEEeC---CCeEEEEEHHHCc
Confidence 457788999999999999865432 122223333 335555555556666776666 77766555421
Q ss_pred -------ceeeee---cccccccEEEEEEcC---CCCEEEEcccCCeEEEEeCCcce
Q 036585 92 -------NKYSRY---FKGHHDRVVLLSLCS---SKDCFISGSLDRTVLLWDQRAEK 135 (304)
Q Consensus 92 -------~~~~~~---~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~ 135 (304)
|.++.. +. ....|.++...+ ++.+++.++..|.++...+....
T Consensus 79 ~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~ 134 (370)
T 3l6v_A 79 EAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFA 134 (370)
T ss_dssp BCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGC
T ss_pred CCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhh
Confidence 222221 22 234565554432 45689999999999998876543
No 365
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=83.99 E-value=4.6 Score=34.44 Aligned_cols=57 Identities=18% Similarity=0.194 Sum_probs=40.5
Q ss_pred eEEEEcCCCcEEEEecCC------------CcEEEEecCCCceeeeeecc-CCCCceEEeCCCCcEEEEe
Q 036585 222 LEASFSPEGMFVISGSGD------------GSVHAWSVRSGKEVASWMSF-DTEPPVIKWAPGSLMFVTG 278 (304)
Q Consensus 222 ~~~~~s~~~~~l~~~~~d------------g~i~v~d~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~s~ 278 (304)
-.|+|+|.|+++++-..+ +.+.+.+..+++...-+.++ ...++.++|+||++.|+..
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 458999999977665432 24566666677765555443 4679999999999888765
No 366
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=83.22 E-value=8.3 Score=32.71 Aligned_cols=61 Identities=21% Similarity=0.271 Sum_probs=42.6
Q ss_pred CCceEEEEecCCcEEEEeeC------------CCeEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEe
Q 036585 174 SDANVVKFSNDGRLMLLTTM------------EGHIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISG 236 (304)
Q Consensus 174 ~~v~~~~~~~~~~~l~~~~~------------dg~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 236 (304)
.....|.|+++|.+.++... ...+..++..+++....+.. .....++.++|+||++.|+++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~--P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG--PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC--CTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC--CCCccccCCEECCCCCEEEEE
Confidence 34567999999986663221 22677778777876555542 134678999999999988876
No 367
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=83.00 E-value=14 Score=28.45 Aligned_cols=193 Identities=9% Similarity=0.043 Sum_probs=101.9
Q ss_pred cCcEEEEeeCCCeEEEEecCCccee---------eeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEcc---C--
Q 036585 26 VGIYLVTASDDESIRLYDVTAATCL---------KTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLH---D-- 91 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~~~---------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~---~-- 91 (304)
+..++++.+.+|.|+--.+.+-+.. ..++.+ +.+..+........++..+. .|.++-+... .
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~---~G~~~~~~~~elp~~~ 77 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSS---RGRVYSMKVYQLPEAT 77 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEET---TSEEEEEEGGGSCCCC
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEEC---CCEEEEEEhhHCcCCC
Confidence 4567889999999987766532211 112222 24444444445556666666 7776655542 1
Q ss_pred ----ceeee---ecccccccEEEEEEc---CCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecC
Q 036585 92 ----NKYSR---YFKGHHDRVVLLSLC---SSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEK 161 (304)
Q Consensus 92 ----~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (304)
|.++. .+. ....|.++... +++.+++..+.+|.++--.+........ .+...+
T Consensus 78 ~~a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r---~G~~~i------------- 140 (307)
T 1zi0_A 78 RGARGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRT---AGKVAI------------- 140 (307)
T ss_dssp SSSCCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCT---TCEESS-------------
T ss_pred CCCCCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhcccc---CCeEEE-------------
Confidence 22222 122 23456555432 3456788889999999887654322211 000000
Q ss_pred CCeEEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCce-------eEEEEeCCCCCCcceEEEEcCCCcEEE
Q 036585 162 GPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGTL-------LSTYNVKPVSRNSTLEASFSPEGMFVI 234 (304)
Q Consensus 162 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~-------~~~~~~~~~~~~~i~~~~~s~~~~~l~ 234 (304)
.+..+ ..+..+........++..+.+|.+..++...-.. ..-+.. .....|.++...+++..++
T Consensus 141 ------~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L--~~~d~Vv~~~~~~~~~~ll 211 (307)
T 1zi0_A 141 ------KLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRL--GEGDKVVSLIVPRGDGAIL 211 (307)
T ss_dssp ------CCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC--CTTCCEEEEECCCSSCEEE
T ss_pred ------EECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEe--CCCCEEEEEEEecCCCEEE
Confidence 11111 3333343434455677788888888887642111 111111 1345566665545556788
Q ss_pred EecCCCcEEEEecC
Q 036585 235 SGSGDGSVHAWSVR 248 (304)
Q Consensus 235 ~~~~dg~i~v~d~~ 248 (304)
+.+..|.++-.++.
T Consensus 212 ~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 212 TATQNGYGKRTAVA 225 (307)
T ss_dssp EEETTSEEEEECGG
T ss_pred EEEcCCceEEEEHH
Confidence 88889998888774
No 368
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=82.09 E-value=16 Score=28.42 Aligned_cols=198 Identities=9% Similarity=0.061 Sum_probs=106.1
Q ss_pred cccCcEEEEeeCCCeEEEEecCCc----ceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC--------
Q 036585 24 MEVGIYLVTASDDESIRLYDVTAA----TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-------- 91 (304)
Q Consensus 24 ~~~~~~l~~~~~d~~i~vw~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~-------- 91 (304)
.++..++++.+.+|.|+--.+.+- .....++.. +.+..+........++..+. .|.++-+....
T Consensus 2 I~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~t~d~ll~fT~---~Gr~~~~~~~elp~~~r~a 77 (323)
T 1wp5_A 2 VASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMNTKDVLLLFTN---KGNYLYCPVHELPDIRWKD 77 (323)
T ss_dssp CSCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEETTSEEEEEET---TSEEEEEEGGGSCBCCTTS
T ss_pred ccCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEECCCCEEEEEEC---CCEEEEEEHHHCcCCCCCC
Confidence 356678899999999987765421 111223333 34444545555566666666 77766555421
Q ss_pred -ceeeeec-c-cccccEEEEEEcC---CCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeE
Q 036585 92 -NKYSRYF-K-GHHDRVVLLSLCS---SKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLD 165 (304)
Q Consensus 92 -~~~~~~~-~-~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
|.++..+ . .....|.++...+ ++.+++..+.+|.++.-.+........ ..+...+.
T Consensus 78 ~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r--~~G~~ai~---------------- 139 (323)
T 1wp5_A 78 LGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRY--SKPLTGIN---------------- 139 (323)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCC--SSCEECSC----------------
T ss_pred CCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccc--cCceEEEE----------------
Confidence 2222221 1 1223455543333 256788899999999988764433221 00100111
Q ss_pred EEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCCCc-------eeEEEEeCCCCCCcceEEEEcCCCc-EEEEec
Q 036585 166 IFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFRGT-------LLSTYNVKPVSRNSTLEASFSPEGM-FVISGS 237 (304)
Q Consensus 166 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~-------~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~ 237 (304)
+... ..+..+........++..+.+|.+..+....-. -..-+.. .....|.++..-+++. .+++.+
T Consensus 140 ---l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L--~~~d~Vv~~~~~~~~~~~ll~vt 213 (323)
T 1wp5_A 140 ---LKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNL--KEGDYIVSGQLITSKDESIVVAT 213 (323)
T ss_dssp ---CCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCC--CTTCCEEEEEEECCTTCEEEEEE
T ss_pred ---eCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEe--CCCCEEEEEEEEcCCCcEEEEEE
Confidence 1111 233334444445567788888988888764311 1111111 1334455554434444 677788
Q ss_pred CCCcEEEEecCC
Q 036585 238 GDGSVHAWSVRS 249 (304)
Q Consensus 238 ~dg~i~v~d~~~ 249 (304)
..|..+..++..
T Consensus 214 ~~G~gKr~~~~e 225 (323)
T 1wp5_A 214 QRGAVKKMKLTE 225 (323)
T ss_dssp TTSEEEEEEGGG
T ss_pred CCCceEEEEHHH
Confidence 888888877754
No 369
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=78.39 E-value=8.5 Score=35.97 Aligned_cols=37 Identities=22% Similarity=0.240 Sum_probs=30.4
Q ss_pred ceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeec
Q 036585 59 GVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYF 98 (304)
Q Consensus 59 ~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~ 98 (304)
.+.+++..++..++++.+. |+++|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~---D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSL---DYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBT---TCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeC---CCEEEEEECCCCCeEEee
Confidence 3455666778889999998 999999999999887653
No 370
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=76.28 E-value=4 Score=35.56 Aligned_cols=37 Identities=14% Similarity=0.369 Sum_probs=29.7
Q ss_pred eeEee-cccCcEEEEeeCCCeEEEEecCCcceeeeecc
Q 036585 19 EILQS-MEVGIYLVTASDDESIRLYDVTAATCLKTINS 55 (304)
Q Consensus 19 ~~i~~-~~~~~~l~~~~~d~~i~vw~~~~~~~~~~~~~ 55 (304)
.+|.+ ..+..++++-+.|.++|+|++.+++++.+..-
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34544 45578999999999999999999998877654
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=72.85 E-value=28 Score=26.29 Aligned_cols=104 Identities=10% Similarity=0.075 Sum_probs=66.0
Q ss_pred cCcEEEEeeCCCeEEEEecCCcc------eeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCc-------
Q 036585 26 VGIYLVTASDDESIRLYDVTAAT------CLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDN------- 92 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~------- 92 (304)
+..+++..+.+|.++...+..-. ....+.. .+.+..+........++..+. .|.+..+....-
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~---~G~~~r~~~~eip~~gR~a 154 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTK---KGRVARFSVREVPPSTPGA 154 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEET---TSEEEEEEGGGSCBCCTTC
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEEC---CCEEEEEEhhhCCCcCCCC
Confidence 45789999999999998875432 2222332 235555555556667777777 888888876431
Q ss_pred --eeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcc
Q 036585 93 --KYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAE 134 (304)
Q Consensus 93 --~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 134 (304)
.....+. ..+.|.++...+++..++..+..|.++...+..-
T Consensus 155 ~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~ 197 (276)
T 3no0_A 155 RGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEI 197 (276)
T ss_dssp CCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGS
T ss_pred CCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHc
Confidence 1112233 2345666655556668888888898888776543
No 372
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=68.74 E-value=35 Score=25.77 Aligned_cols=187 Identities=11% Similarity=0.062 Sum_probs=84.1
Q ss_pred CCeEEEEecCCcceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCceeeeecccccccEEEEEEcCCCC
Q 036585 36 DESIRLYDVTAATCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYSRYFKGHHDRVVLLSLCSSKD 115 (304)
Q Consensus 36 d~~i~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 115 (304)
||.|..|-....-.+-.-..-...|..++...... +... +|.|+.|-....-.+.........|..++.-.+..
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs--~al~----~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~ 153 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWAS--YALK----DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTA 153 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEE--EEEE----TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE
T ss_pred CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEE--EEEe----CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEE
Confidence 78888886543211111001112455555433222 2222 45677775543211111111234566666543332
Q ss_pred EEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCcEEEEeeCCC
Q 036585 116 CFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGRLMLLTTMEG 195 (304)
Q Consensus 116 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 195 (304)
.++ . ||.++.|-......... +. .....|..++...+.. ++. .+|
T Consensus 154 ~~l--~-~G~v~~wG~n~~gqlg~---p~--------------------------~~~~~v~~i~~G~~hs-~al--~~G 198 (282)
T 3qhy_B 154 LAV--K-NGGVIAWGDNYFGQTTV---PA--------------------------EAQSGVDDVAGGIFHS-LAL--KDG 198 (282)
T ss_dssp EEE--E-TTEEEEEECCTTSTTSC---CG--------------------------GGGSSEEEEEECSSEE-EEE--ETT
T ss_pred EEE--E-CCEEEEecCCCCCCCCC---ce--------------------------ecCCCeEEEEecCCEE-EEE--ECC
Confidence 222 3 68888886543322210 00 0012345555443332 333 588
Q ss_pred eEEEEEcCCCceeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeCCCCc
Q 036585 196 HIHVLDSFRGTLLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWAPGSL 273 (304)
Q Consensus 196 ~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~ 273 (304)
.|+.|=....-.+. .+......|..++-......+++ ||.|+.|-.....++.. ...|..++..+...
T Consensus 199 ~v~~wG~n~~gqlg---~p~~~~~~v~~i~~G~~h~~al~---~g~v~~wG~n~~gq~~v----~~~v~~iaaG~~h~ 266 (282)
T 3qhy_B 199 KVIAWGDNRYKQTT---VPTEALSGVSAIASGEWYSLALK---NGKVIAWGSSRTAPSSV----QSGVSSIEAGPNAA 266 (282)
T ss_dssp EEEEEECCTTSTTC---CCGGGGSSCCEEEECSSCEEEEE---TTEEEEESTTCCCCGGG----SSCEEEEEECSSCE
T ss_pred eEEEEECCCCCCCC---CCcccCCCceEEEcCCCEEEEEE---CCEEEEecCCCCccccC----CCCcEEEEECcCeE
Confidence 88888654321111 00012345666665544433333 88999997654433222 22455555444433
No 373
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.80 E-value=5.9 Score=34.56 Aligned_cols=35 Identities=11% Similarity=0.187 Sum_probs=27.9
Q ss_pred ceEEEEcCCCcEEEEecCCCcEEEEecCCCceeeeee
Q 036585 221 TLEASFSPEGMFVISGSGDGSVHAWSVRSGKEVASWM 257 (304)
Q Consensus 221 i~~~~~s~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~ 257 (304)
|.++.+ +..++++-+.|.++|+|++++++++....
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 444443 57799999999999999999999876653
No 374
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=63.73 E-value=54 Score=26.03 Aligned_cols=98 Identities=8% Similarity=0.030 Sum_probs=48.2
Q ss_pred CcEEEEeeCCCeEEEEecCC-cceeeee--cccccceeEEEEcc-CCCeEEEEecCCCCC----ceEEEEccCceeeeec
Q 036585 27 GIYLVTASDDESIRLYDVTA-ATCLKTI--NSKKYGVDLVCFTS-HPTTVIYSSKNGWDE----SLRLLSLHDNKYSRYF 98 (304)
Q Consensus 27 ~~~l~~~~~d~~i~vw~~~~-~~~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~~~~d~----~i~vwd~~~~~~~~~~ 98 (304)
...|..+...| +.+++... ++....+ ......|.+|++.| +...+.+++. .+ .|...+ ..++.-..+
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~---~g~~g~gl~~s~-D~G~tW~~~ 96 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAAR---TGHLGPTVFRSD-DGGGNWTEA 96 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEE---C--CCEEEEEES-STTSCCEEC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEec---CCCCCccEEEeC-CCCCCceEC
Confidence 34666777777 55554332 2222221 12234699999998 3445555554 43 343322 222211111
Q ss_pred ------cc--------ccccEEEEEEcC-C-CCEEEEcccCCeEEEE
Q 036585 99 ------KG--------HHDRVVLLSLCS-S-KDCFISGSLDRTVLLW 129 (304)
Q Consensus 99 ------~~--------~~~~v~~~~~~~-~-~~~l~~~~~dg~i~iw 129 (304)
.. ....|.++++.| + ...++.+...+.|...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 97 TRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp SBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred CccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 11 112577888886 2 4556666555655443
No 375
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=59.94 E-value=57 Score=25.07 Aligned_cols=103 Identities=12% Similarity=0.032 Sum_probs=63.1
Q ss_pred cCcEEEEeeCCCeEEEEecCCc-------ceeeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccCcee----
Q 036585 26 VGIYLVTASDDESIRLYDVTAA-------TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKY---- 94 (304)
Q Consensus 26 ~~~~l~~~~~d~~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~~~~---- 94 (304)
++.+++..+.+|.++.-.+..- .....+..+ +.+..+........++..+. +|.+..+....-..
T Consensus 108 ~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~---~G~~irf~~~~v~~~gr~ 183 (307)
T 1zi0_A 108 EGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSA---EGKVVRFKESSVRAMGCN 183 (307)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEET---TSEEEEEEGGGSCBCCTT
T ss_pred CCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECC---CCcEEEEEHHHcCccCCC
Confidence 4668899999999998876522 122223333 45555555555556777776 88888777653211
Q ss_pred ---e--eecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCc
Q 036585 95 ---S--RYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRA 133 (304)
Q Consensus 95 ---~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 133 (304)
+ ..+. ..+.|.++...+++..++..+..|.++-.++..
T Consensus 184 a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e 226 (307)
T 1zi0_A 184 TTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE 226 (307)
T ss_dssp CCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred CCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence 1 1222 234566665555556778888888888877643
No 376
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=57.64 E-value=76 Score=27.65 Aligned_cols=57 Identities=21% Similarity=0.293 Sum_probs=37.5
Q ss_pred EEEEeeCCCeEEEE-EcCCCc-eeEEEEeCCCCCCcceEEEEcCCC--cEEEEecCCCcEEE
Q 036585 187 LMLLTTMEGHIHVL-DSFRGT-LLSTYNVKPVSRNSTLEASFSPEG--MFVISGSGDGSVHA 244 (304)
Q Consensus 187 ~l~~~~~dg~i~~~-d~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~--~~l~~~~~dg~i~v 244 (304)
.++.|+.+|.|.-. ...... .+..+... ....+|..+.++++. .+|++++.++.++|
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~~~~ee~~~~-~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAVHIIEETQLF-QDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSEEEEEEEECC-TTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCceEEEEeccc-CCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 67788899986443 433322 22333322 245688899999988 89999988776665
No 377
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=51.40 E-value=79 Score=27.56 Aligned_cols=57 Identities=19% Similarity=0.195 Sum_probs=36.2
Q ss_pred EEEEeeCCCeEEE-EEcCCCc-------eeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEE
Q 036585 187 LMLLTTMEGHIHV-LDSFRGT-------LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHA 244 (304)
Q Consensus 187 ~l~~~~~dg~i~~-~d~~~~~-------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v 244 (304)
.+..|+.+|.|.- .....+. .+..+... ....+|..+.++++..+|++++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~-~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVF-REPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECS-SSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeec-CCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4667888887643 2222111 22233322 24568899999999999999998876555
No 378
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=51.13 E-value=56 Score=27.22 Aligned_cols=69 Identities=19% Similarity=0.195 Sum_probs=42.2
Q ss_pred CceEEEEecC----C--cEEEEeeCCCeEEEEEcC-CCc-------eeEEEEeCCCCCCcceEEEEcCCCcEEEEecCCC
Q 036585 175 DANVVKFSND----G--RLMLLTTMEGHIHVLDSF-RGT-------LLSTYNVKPVSRNSTLEASFSPEGMFVISGSGDG 240 (304)
Q Consensus 175 ~v~~~~~~~~----~--~~l~~~~~dg~i~~~d~~-~~~-------~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 240 (304)
..++|+...- + ..+..|+.+|.|.-.-+. .+. .+..+... ....+|..+.++++..+|+.++.++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~-~~~~pI~~m~l~~~~~~Lyv~s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVF-REPTTISAMELSTKQQQLYIGSTAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCS-SSCCCCCEEEEETTTTEEEEEBSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeec-CCCCccceEEEcCCCCEEEEEECCe
Confidence 3455655432 3 346678889876544332 211 22233322 1357889999999999999998887
Q ss_pred cEEE
Q 036585 241 SVHA 244 (304)
Q Consensus 241 ~i~v 244 (304)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6554
No 379
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=49.86 E-value=1.4e+02 Score=26.38 Aligned_cols=37 Identities=16% Similarity=0.171 Sum_probs=26.0
Q ss_pred eeEEE-EccCCCeEEEEecC-C-CCCceEEEEccCceeee
Q 036585 60 VDLVC-FTSHPTTVIYSSKN-G-WDESLRLLSLHDNKYSR 96 (304)
Q Consensus 60 v~~~~-~~~~~~~l~~~~~~-~-~d~~i~vwd~~~~~~~~ 96 (304)
...+. ++|++++++.+-+. | .-..++++|+.+++.+.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~ 170 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK 170 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC
Confidence 34455 89999988776542 1 13479999999998764
No 380
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=47.73 E-value=84 Score=23.37 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=42.8
Q ss_pred CceEEEEecCCcEEEEeeCCCeEEEEEcCC-------CceeEEEEeCCCCCCcceEEEEc-CCCcEEEEecCCCcEEEEe
Q 036585 175 DANVVKFSNDGRLMLLTTMEGHIHVLDSFR-------GTLLSTYNVKPVSRNSTLEASFS-PEGMFVISGSGDGSVHAWS 246 (304)
Q Consensus 175 ~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~-------~~~~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~dg~i~v~d 246 (304)
.|..+....++.+++..+..|.++...+.. +.....+. ....+..+... .++..++..+.+|.+..++
T Consensus 85 ~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~----~~d~lv~~~~~~~~~~~i~l~T~~G~~lrf~ 160 (256)
T 1zvt_A 85 TVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLP----ENAHVMPPVVIEDASDMLLAITQAGRMLMFP 160 (256)
T ss_dssp CEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCC----TTCCBCCCEECCCTTCEEEEEETTSEEEEEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEEC----CCCEEEEEEEecCCCCEEEEEcCCCeEEEEE
Confidence 344443323566788889999999988743 22222222 22345445454 3455777788889888888
Q ss_pred cCC
Q 036585 247 VRS 249 (304)
Q Consensus 247 ~~~ 249 (304)
...
T Consensus 161 ~~e 163 (256)
T 1zvt_A 161 VSD 163 (256)
T ss_dssp GGG
T ss_pred HHH
Confidence 754
No 381
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=46.81 E-value=49 Score=27.96 Aligned_cols=69 Identities=12% Similarity=0.097 Sum_probs=43.3
Q ss_pred CceEEEEecCC--cEEEEeeCCCeEEEEEcCCC----ceeEEEEeCCCCCCcce-EEEEcCCCcEEEEecCCCcEEE
Q 036585 175 DANVVKFSNDG--RLMLLTTMEGHIHVLDSFRG----TLLSTYNVKPVSRNSTL-EASFSPEGMFVISGSGDGSVHA 244 (304)
Q Consensus 175 ~v~~~~~~~~~--~~l~~~~~dg~i~~~d~~~~----~~~~~~~~~~~~~~~i~-~~~~s~~~~~l~~~~~dg~i~v 244 (304)
..++++....+ ..+..|+.+|.|.-..+... .....+.... ...+|. .+.+++++.+|++++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~-~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFK-DGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCT-TCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeec-CCCccccceEEccCCCeEEEEecccccee
Confidence 34555554433 45777899998766555422 2334444322 245775 8999999999999987765554
No 382
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=44.55 E-value=1.2e+02 Score=24.15 Aligned_cols=73 Identities=10% Similarity=0.095 Sum_probs=44.2
Q ss_pred ecceeeEeecc-----cCcEEEEeeCCCeEEEEecCCc-------ceeeeecccccceeEEEEccCCCeEEEEecCCCCC
Q 036585 15 ELSEEILQSME-----VGIYLVTASDDESIRLYDVTAA-------TCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDE 82 (304)
Q Consensus 15 ~~~~~~i~~~~-----~~~~l~~~~~d~~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~ 82 (304)
...+.++...+ .+.+|+.++..|.++.-.+... .....+.. .+.+..+........++..+. +|
T Consensus 96 ~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~---~G 171 (370)
T 3l6v_A 96 ESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDRDVLLFAS---NG 171 (370)
T ss_dssp CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCCEEEEEET---TS
T ss_pred CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeC---CC
Confidence 33444554433 3568999999999998876532 22223333 334445555555566777776 88
Q ss_pred ceEEEEccC
Q 036585 83 SLRLLSLHD 91 (304)
Q Consensus 83 ~i~vwd~~~ 91 (304)
.+..+....
T Consensus 172 ~~irf~~~~ 180 (370)
T 3l6v_A 172 KTVRFGEST 180 (370)
T ss_dssp EEEEEEGGG
T ss_pred eEEEEEccc
Confidence 887777653
No 383
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=42.35 E-value=1.4e+02 Score=25.60 Aligned_cols=58 Identities=16% Similarity=0.044 Sum_probs=36.4
Q ss_pred cEEEEeeCCCeEEEEEcCCCc----e--eEEEEeCCCCCCcceEEEEcCCCcEEEEecCCCcEEE
Q 036585 186 RLMLLTTMEGHIHVLDSFRGT----L--LSTYNVKPVSRNSTLEASFSPEGMFVISGSGDGSVHA 244 (304)
Q Consensus 186 ~~l~~~~~dg~i~~~d~~~~~----~--~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~v 244 (304)
..+..|+.+|.|.-.-..... . +..+... ....+|..+.++++..+|+.++.++.++|
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~-~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPF-RRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCC-SSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeecc-CCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 356778888887644332211 1 1222211 24567899999999999999887766555
No 384
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=39.14 E-value=1.4e+02 Score=23.54 Aligned_cols=47 Identities=15% Similarity=0.065 Sum_probs=26.6
Q ss_pred eEEEEcCC-CcEEEEecCCCcEEEEecCCCceeeeeeccCCCCceEEeC
Q 036585 222 LEASFSPE-GMFVISGSGDGSVHAWSVRSGKEVASWMSFDTEPPVIKWA 269 (304)
Q Consensus 222 ~~~~~s~~-~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~ 269 (304)
..++++|. ...|+.++.++.|..-+ ..++.-..+..+-..+.+++|.
T Consensus 344 ~~~~~~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 344 QAMTADAHAPVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp BSEEECCSSSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred EEEEECCCCCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 35788874 34566676666555432 3455444454444456677663
No 385
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=34.46 E-value=1.4e+02 Score=25.19 Aligned_cols=68 Identities=13% Similarity=0.155 Sum_probs=43.7
Q ss_pred CceEEEEecC-C-cEEEEeeCCCeEEEEEcC-C--CceeEEEEeCCCCCCcc-eEEEEcCCCcEEEEecCCCcEEE
Q 036585 175 DANVVKFSND-G-RLMLLTTMEGHIHVLDSF-R--GTLLSTYNVKPVSRNST-LEASFSPEGMFVISGSGDGSVHA 244 (304)
Q Consensus 175 ~v~~~~~~~~-~-~~l~~~~~dg~i~~~d~~-~--~~~~~~~~~~~~~~~~i-~~~~~s~~~~~l~~~~~dg~i~v 244 (304)
..+.|+...- + ..+..|+.+|.|.-.-+. . ...+..+.. ....+| ..+.++++..+|+.++..+.++|
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v--~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI--QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES--STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc--CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 3566665432 2 356678899987655443 2 223444543 244567 48999999999999988876665
No 386
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=33.58 E-value=1.7e+02 Score=22.70 Aligned_cols=111 Identities=12% Similarity=0.161 Sum_probs=60.6
Q ss_pred CCeEEEEecCCCCCceEEEEccCc--------eeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceE
Q 036585 69 PTTVIYSSKNGWDESLRLLSLHDN--------KYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLL 140 (304)
Q Consensus 69 ~~~l~~~~~~~~d~~i~vwd~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 140 (304)
+.+++.++. +|.++...+..- .....+... +.+..+........++..+.+|.+..++...-.....
T Consensus 106 ~~~ll~~T~---~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR- 180 (323)
T 1wp5_A 106 NGYFLFVTR---NGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGV- 180 (323)
T ss_dssp SCEEEEEET---TSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCS-
T ss_pred CceEEEEeC---CCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCC-
Confidence 567888888 999998887532 112223322 4555555554555677778888888877653211110
Q ss_pred EEeccceeEecCCCeEEEecCCCeEEEEecCCCCCceEEEEecCCc-EEEEeeCCCeEEEEEcCC
Q 036585 141 RVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDANVVKFSNDGR-LMLLTTMEGHIHVLDSFR 204 (304)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~d~~~ 204 (304)
...+ ++...+. ....|..+..-+++. .+++.+..|..+..++..
T Consensus 181 ~a~G-------------------V~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 181 RAAG-------------------VKGMNLK-EGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp SCCC-------------------EECCCCC-TTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CCcC-------------------EEEEEeC-CCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 0011 1111111 122344443333344 688888889888877643
No 387
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=30.67 E-value=2.5e+02 Score=23.91 Aligned_cols=71 Identities=11% Similarity=0.085 Sum_probs=44.2
Q ss_pred CceEEEEec----C--CcEEEEeeCCCeEE-EEEcCC-------CceeEEEEeCCC--------CCCcceEEEEcCCCcE
Q 036585 175 DANVVKFSN----D--GRLMLLTTMEGHIH-VLDSFR-------GTLLSTYNVKPV--------SRNSTLEASFSPEGMF 232 (304)
Q Consensus 175 ~v~~~~~~~----~--~~~l~~~~~dg~i~-~~d~~~-------~~~~~~~~~~~~--------~~~~i~~~~~s~~~~~ 232 (304)
..+.|+... + -..++.|+.+|.|. +..... ...+..+..... ...+|..+.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 357777764 1 24677899999875 333221 112233332211 2457889999999999
Q ss_pred EEEecCCCcEEEE
Q 036585 233 VISGSGDGSVHAW 245 (304)
Q Consensus 233 l~~~~~dg~i~v~ 245 (304)
|+.++.++.++|-
T Consensus 484 LYV~s~~~V~qVP 496 (565)
T 3oky_B 484 LYVAFSTCVIKVP 496 (565)
T ss_dssp EEEECSSCEEEEE
T ss_pred EEEEecCeEEEee
Confidence 9999888876663
No 388
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=29.81 E-value=1.9e+02 Score=24.06 Aligned_cols=56 Identities=7% Similarity=0.063 Sum_probs=35.2
Q ss_pred cEEEEeeCCCeEEEEecC-Cc-------ceeeeecc--cccceeEEEEccCCCeEEEEecCCCCCceEE
Q 036585 28 IYLVTASDDESIRLYDVT-AA-------TCLKTINS--KKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 86 (304)
Q Consensus 28 ~~l~~~~~d~~i~vw~~~-~~-------~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~v 86 (304)
..++.|..+|.|.-.-+. .+ ..+..+.- ...+|..|.++++...|++++. ++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~---~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGST---AGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBS---SCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEEC---CeEEEE
Confidence 357788889986533322 21 12223332 3468999999999999999986 554443
No 389
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=28.05 E-value=2.1e+02 Score=25.09 Aligned_cols=68 Identities=10% Similarity=0.048 Sum_probs=42.0
Q ss_pred ceEEEEecC--CcEEEEeeCCCeEEEEEcCC-C---ceeEEEEeCCCCCCcc-eEEEEcCCCcEEEEecCCCcEEE
Q 036585 176 ANVVKFSND--GRLMLLTTMEGHIHVLDSFR-G---TLLSTYNVKPVSRNST-LEASFSPEGMFVISGSGDGSVHA 244 (304)
Q Consensus 176 v~~~~~~~~--~~~l~~~~~dg~i~~~d~~~-~---~~~~~~~~~~~~~~~i-~~~~~s~~~~~l~~~~~dg~i~v 244 (304)
.++++.... -..+..|+.+|.|.-.-+.. . ..+..+.... ...+| ..+.++++..+|+.++..+.++|
T Consensus 401 lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~-~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 401 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFK-DGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp BCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCT-TCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeecc-CCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 444444432 34567789999887554432 1 2333443321 34565 68999999889999987776665
No 390
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=25.21 E-value=2.3e+02 Score=21.70 Aligned_cols=152 Identities=11% Similarity=0.090 Sum_probs=81.0
Q ss_pred CcEEEEeeCCCeEEEEecCC---------ccee---eeecccccceeEEEEcc---CCCeEEEEecCCCCCceEEEEccC
Q 036585 27 GIYLVTASDDESIRLYDVTA---------ATCL---KTINSKKYGVDLVCFTS---HPTTVIYSSKNGWDESLRLLSLHD 91 (304)
Q Consensus 27 ~~~l~~~~~d~~i~vw~~~~---------~~~~---~~~~~~~~~v~~~~~~~---~~~~l~~~~~~~~d~~i~vwd~~~ 91 (304)
.+.++..+..|.++-..... |..+ ..+.. ...|..+...+ +..+++..+. .|.++...+..
T Consensus 58 ~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~---~G~~kr~~l~~ 133 (312)
T 1suu_A 58 HDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTA---SGKIARFESTD 133 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEET---TSEEEEEEGGG
T ss_pred CCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeC---CCeEEEEEHHH
Confidence 45566667777766555431 1111 11222 22344443332 4567788887 89998887743
Q ss_pred -------ceeeeecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCe
Q 036585 92 -------NKYSRYFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPL 164 (304)
Q Consensus 92 -------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (304)
|.....+.. .+.+..+....+...++..+.+|.+..+....-..... ...+ +
T Consensus 134 ~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR-~~~G-------------------v 192 (312)
T 1suu_A 134 FKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNR-GTQG-------------------V 192 (312)
T ss_dssp GCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT-TBCC-------------------E
T ss_pred hhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCC-CCCC-------------------e
Confidence 222233443 45566665555556788888889888887654211100 0001 1
Q ss_pred EEEEecCCCCCceEEEEecCCcEEEEeeCCCeEEEEEcCC
Q 036585 165 DIFSVGGDISDANVVKFSNDGRLMLLTTMEGHIHVLDSFR 204 (304)
Q Consensus 165 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~d~~~ 204 (304)
....+.. ...+..+..-+++..+++.+..|..+..++..
T Consensus 193 ~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 193 CGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp ECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 1111111 23344444434556688888899988888743
No 391
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=24.32 E-value=3.1e+02 Score=23.57 Aligned_cols=56 Identities=13% Similarity=0.106 Sum_probs=35.4
Q ss_pred cEEEEeeCCCeEEEEec-CCc----c-eeeeec--ccccceeEEEEccCCCeEEEEecCCCCCceEE
Q 036585 28 IYLVTASDDESIRLYDV-TAA----T-CLKTIN--SKKYGVDLVCFTSHPTTVIYSSKNGWDESLRL 86 (304)
Q Consensus 28 ~~l~~~~~d~~i~vw~~-~~~----~-~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~v 86 (304)
..++.|+.+|.|.-.-. ..+ . .+..+. ....+|..|.++++...|++++. ++.++|
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~---~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQ---WEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECS---SEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEec---ceEEEc
Confidence 46778888998754332 222 1 122232 23468899999999999999885 544444
No 392
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=24.10 E-value=1.4e+02 Score=18.91 Aligned_cols=30 Identities=23% Similarity=0.355 Sum_probs=21.1
Q ss_pred CeEEEEEcCCCceeEEEEeCCCCCCcceEE
Q 036585 195 GHIHVLDSFRGTLLSTYNVKPVSRNSTLEA 224 (304)
Q Consensus 195 g~i~~~d~~~~~~~~~~~~~~~~~~~i~~~ 224 (304)
-.|.+||..+|....++.......+.+.++
T Consensus 45 E~V~I~NvnNG~Rf~TYvI~GerGSg~I~l 74 (114)
T 3oug_A 45 EKVQVVNLNNGERLETYVIKGEPNSKTIAL 74 (114)
T ss_dssp BEEEEEETTTCCEEEEEEEEECTTSCCEEE
T ss_pred CEEEEEECCCCceEEEEEEEccCCCCEEEe
Confidence 379999999999998887543333444433
No 393
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=23.23 E-value=1.1e+02 Score=18.69 Aligned_cols=29 Identities=17% Similarity=0.327 Sum_probs=20.2
Q ss_pred eEEEEEcCCCceeEEEEeCCCCCCcceEE
Q 036585 196 HIHVLDSFRGTLLSTYNVKPVSRNSTLEA 224 (304)
Q Consensus 196 ~i~~~d~~~~~~~~~~~~~~~~~~~i~~~ 224 (304)
.|.+||..+|....++.......+.+.++
T Consensus 19 ~V~IvNvnNG~Rf~TYvI~GerGSG~I~l 47 (96)
T 1vc3_B 19 QVDIYDITNGARLTTYALPGERGSGVIGI 47 (96)
T ss_dssp EEEEEETTTCCEEEEECEEECTTTTCEEE
T ss_pred EEEEEECCCCceEEEEEEEccCCCCeEEE
Confidence 68999999999988887543333444433
No 394
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=21.93 E-value=1.5e+02 Score=18.41 Aligned_cols=23 Identities=9% Similarity=0.057 Sum_probs=12.1
Q ss_pred EEEEccCCCeEEEEecCCCCCceEEEE
Q 036585 62 LVCFTSHPTTVIYSSKNGWDESLRLLS 88 (304)
Q Consensus 62 ~~~~~~~~~~l~~~~~~~~d~~i~vwd 88 (304)
.+.+..+|+.++... ++...+|.
T Consensus 53 ~l~l~~dGNLVl~~~----~~~~~vW~ 75 (111)
T 3mez_A 53 TLRLNNRGQLEIHSA----NSNTPVWV 75 (111)
T ss_dssp EEEECTTSCEEEECS----SCSSCSEE
T ss_pred EEEEcCCCcEEEEeC----CCCEEEEE
Confidence 455666666655543 33334563
No 395
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=20.38 E-value=2.7e+02 Score=20.63 Aligned_cols=149 Identities=7% Similarity=-0.016 Sum_probs=77.3
Q ss_pred cEEEEeeCCCeEEEEecCCcce-eeeecccccceeEEEEccCCCeEEEEecCCCCCceEEEEccC-------ceeee---
Q 036585 28 IYLVTASDDESIRLYDVTAATC-LKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHD-------NKYSR--- 96 (304)
Q Consensus 28 ~~l~~~~~d~~i~vw~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~d~~i~vwd~~~-------~~~~~--- 96 (304)
..+++.+.+|.|+--....... ...+.... .+..+........++..+. .|.++-+.... |.++.
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lke~D-~l~~~~~~~t~~~ll~~T~---~Gr~~~~~~~elp~~r~~G~~i~~~i 78 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYKAGD-SFKAAVKGKSNQPVVFVDS---TGRSYAIDPITLPSARGQGEPLTGKL 78 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCCTTC-CEEEEEEEETTSCEEEEET---TSEEEEECGGGSCCSSSCCEEGGGTC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCCCCC-EEEEEEEeCCCCEEEEEeC---CCeEEEEEHHHCCCcCCCCeEeeeee
Confidence 3456677888887655432111 11233333 3444444444445666665 77766554432 22211
Q ss_pred ecccccccEEEEEEcCCCCEEEEcccCCeEEEEeCCcceeeceEEEeccceeEecCCCeEEEecCCCeEEEEecCCCCCc
Q 036585 97 YFKGHHDRVVLLSLCSSKDCFISGSLDRTVLLWDQRAEKCQGLLRVQGRPAAAYDDQGLVFGYEKGPLDIFSVGGDISDA 176 (304)
Q Consensus 97 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 176 (304)
.+. ....|.++....++.+++.++..|.++...+........ .+ ..+..+... ..+
T Consensus 79 ~L~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r---~G-------------------~~~i~L~~~-d~l 134 (256)
T 1zvt_A 79 TLP-PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNR---AG-------------------KALITLPEN-AHV 134 (256)
T ss_dssp CCC-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCST---TC-------------------EECBCCCTT-CCB
T ss_pred cCC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCc---Cc-------------------eEEEEECCC-CEE
Confidence 122 234676664434566788889999999988754322110 00 001111111 233
Q ss_pred eEEEEe-cCCcEEEEeeCCCeEEEEEcCC
Q 036585 177 NVVKFS-NDGRLMLLTTMEGHIHVLDSFR 204 (304)
Q Consensus 177 ~~~~~~-~~~~~l~~~~~dg~i~~~d~~~ 204 (304)
-.+... .++..++..+.+|.+..+....
T Consensus 135 v~~~~~~~~~~~i~l~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 135 MPPVVIEDASDMLLAITQAGRMLMFPVSD 163 (256)
T ss_dssp CCCEECCCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEecCCCCEEEEEcCCCeEEEEEHHH
Confidence 333333 3455788888999988888753
Done!