Query 036586
Match_columns 568
No_of_seqs 428 out of 3373
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 05:08:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036586.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036586hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fln_A Protease DO-like 2, chl 100.0 2.7E-76 9.2E-81 645.8 49.0 442 118-567 45-504 (539)
2 4a8c_A Periplasmic PH-dependen 100.0 1.3E-54 4.4E-59 468.6 43.5 378 108-540 11-424 (436)
3 3pv2_A DEGQ; trypsin fold, PDZ 100.0 1.8E-54 6E-59 468.9 34.6 382 109-540 18-447 (451)
4 1ky9_A Protease DO, DEGP, HTRA 100.0 8.9E-52 3E-56 447.4 21.6 372 110-539 13-443 (448)
5 3stj_A Protease DEGQ; serine p 100.0 7.7E-47 2.6E-51 395.9 30.1 289 109-418 12-336 (345)
6 1te0_A Protease DEGS; two doma 100.0 2.1E-43 7.1E-48 366.3 27.1 285 108-417 7-316 (318)
7 3qo6_A Protease DO-like 1, chl 100.0 2.7E-41 9.4E-46 354.6 25.4 285 108-418 15-335 (348)
8 1lcy_A HTRA2 serine protease; 100.0 1.3E-40 4.6E-45 346.2 24.0 274 109-414 14-322 (325)
9 1y8t_A Hypothetical protein RV 100.0 2.2E-39 7.5E-44 336.8 29.3 266 109-417 5-315 (324)
10 3num_A Serine protease HTRA1; 100.0 6E-40 2E-44 342.3 20.4 278 108-417 12-323 (332)
11 3sti_A Protease DEGQ; serine p 100.0 3.5E-30 1.2E-34 257.1 16.6 195 109-312 12-241 (245)
12 1l1j_A Heat shock protease HTR 100.0 1.6E-29 5.4E-34 251.6 15.3 199 109-315 3-239 (239)
13 3lgi_A Protease DEGS; stress-s 100.0 8.9E-28 3E-32 238.6 20.5 193 108-313 18-234 (237)
14 3tjo_A Serine protease HTRA1; 99.9 2.4E-26 8.1E-31 227.6 17.1 179 108-303 29-230 (231)
15 3k6y_A Serine protease, possib 99.9 1.6E-23 5.5E-28 207.7 21.1 174 113-308 34-231 (237)
16 2w5e_A Putative serine proteas 99.8 1.4E-19 4.9E-24 169.2 15.1 132 149-291 20-156 (163)
17 2l97_A HTRA, putative serine p 99.8 6E-20 2.1E-24 166.4 10.1 123 283-417 2-128 (134)
18 2as9_A Serine protease; trypsi 99.8 1.9E-18 6.6E-23 168.0 12.3 174 124-303 3-203 (210)
19 3rle_A Golgi reassembly-stacki 99.7 2.1E-17 7.2E-22 160.8 11.9 152 335-535 15-169 (209)
20 3gsl_A Disks large homolog 4; 99.7 2.3E-16 7.8E-21 150.6 15.1 151 335-537 34-191 (196)
21 1p1d_A PDZ45, glutamate recept 99.6 5.3E-16 1.8E-20 149.1 11.6 148 335-536 35-195 (196)
22 2qt5_A Glutamate receptor-inte 99.6 2.3E-15 7.9E-20 144.9 14.5 151 335-538 32-197 (200)
23 1agj_A Epidermolytic toxin A; 99.6 4E-15 1.4E-19 147.4 11.6 151 150-301 55-240 (242)
24 2w7s_A Serine protease SPLA; h 99.6 2E-15 6.9E-20 145.0 8.9 161 139-301 12-197 (200)
25 3r0h_A INAD, inactivation-NO-a 99.6 2.1E-14 7.3E-19 138.5 14.1 141 336-535 45-195 (206)
26 2vid_A Serine protease SPLB; h 99.6 2.5E-14 8.7E-19 137.3 13.6 162 139-301 12-201 (204)
27 1w9e_A Syntenin 1; cell adhesi 99.5 1.1E-13 3.8E-18 129.3 13.4 130 310-516 15-145 (166)
28 2h5c_A Alpha-lytic protease; s 99.5 1.5E-13 5.2E-18 132.4 14.3 137 150-298 16-191 (198)
29 2o8l_A V8 protease, taphylococ 99.5 3.8E-13 1.3E-17 136.0 17.8 150 150-302 34-210 (274)
30 1qtf_A Exfoliative toxin B; se 99.5 1.1E-13 3.6E-18 137.7 12.3 139 150-295 48-216 (246)
31 1mbm_A NSP4 proteinase, chymot 99.5 1.4E-13 5E-18 128.0 10.3 117 123-275 3-130 (198)
32 1wcz_A Glutamyl endopeptidase; 99.5 8.7E-13 3E-17 132.9 16.7 151 150-303 34-211 (268)
33 2pzd_A Serine protease HTRA2; 99.4 2.3E-13 7.8E-18 118.9 8.1 97 305-416 1-103 (113)
34 2oua_A Serine protease, protei 99.4 3.6E-12 1.2E-16 121.8 14.7 135 150-298 14-182 (188)
35 2p3w_A Probable serine proteas 99.4 2.5E-13 8.7E-18 118.5 6.1 97 305-416 1-103 (112)
36 2xkx_A Disks large homolog 4; 99.3 7.4E-12 2.5E-16 142.8 14.4 153 335-539 88-247 (721)
37 1hpg_A Glutamic acid specific 99.3 1.9E-11 6.5E-16 116.6 14.2 138 150-298 13-182 (187)
38 2ea3_A Chymotrypsin; celloulom 99.3 3.4E-11 1.2E-15 115.0 13.0 134 150-298 16-176 (189)
39 3suz_A Amyloid beta A4 precurs 99.2 2E-12 6.8E-17 137.1 3.8 138 336-535 232-373 (388)
40 3fan_A Non-structural protein; 99.2 2.6E-11 8.7E-16 114.7 10.1 112 149-277 29-146 (213)
41 2pfe_A Protease A, alkaline se 99.2 3.1E-11 1E-15 115.0 10.8 132 151-298 16-179 (186)
42 2i4s_A General secretion pathw 99.2 4.2E-11 1.4E-15 103.3 9.8 101 291-413 4-105 (105)
43 2xkx_A Disks large homolog 4; 99.2 1.5E-10 5.3E-15 131.9 17.2 172 335-537 183-392 (721)
44 2qa9_E Streptogrisin-B; chymot 99.2 1E-10 3.5E-15 110.9 11.7 142 150-299 12-181 (185)
45 3i18_A LMO2051 protein; alpha- 99.2 6.3E-11 2.1E-15 101.3 9.1 73 335-417 6-78 (100)
46 2vz5_A TAX1-binding protein 3; 99.2 2.6E-11 8.8E-16 110.1 5.9 103 301-415 29-135 (139)
47 2kl1_A YLBL protein; structure 99.1 6.3E-11 2.2E-15 100.1 6.1 73 335-417 4-76 (94)
48 3id1_A Regulator of sigma E pr 99.1 7.5E-11 2.6E-15 99.9 6.3 86 338-439 4-92 (95)
49 2kjp_A Uncharacterized protein 99.1 2E-11 6.8E-16 102.7 2.0 72 336-417 1-72 (91)
50 2i6v_A General secretion pathw 99.0 1.8E-10 6E-15 95.8 5.5 68 336-413 19-87 (87)
51 1uit_A Human discs large 5 pro 99.0 1.1E-10 3.6E-15 102.6 3.1 91 301-407 6-104 (117)
52 2eaq_A LIM domain only protein 99.0 2.7E-10 9.2E-15 95.0 4.4 72 310-405 16-90 (90)
53 2sga_A Proteinase A; hydrolase 98.9 2.6E-09 9E-14 100.8 9.7 134 150-298 12-176 (181)
54 2w4f_A Protein LAP4; structura 98.9 3E-09 1E-13 89.7 7.9 82 310-406 13-95 (97)
55 3cyy_A Tight junction protein 98.9 6.9E-10 2.3E-14 92.7 3.4 77 322-411 10-90 (92)
56 2fcf_A Multiple PDZ domain pro 98.9 1.8E-09 6.2E-14 92.2 5.4 82 310-405 15-100 (103)
57 2zpm_A Regulator of sigma E pr 98.8 1.8E-09 6.2E-14 90.1 4.4 68 337-415 5-73 (91)
58 2rcz_A Tight junction protein 98.8 1.2E-09 4.1E-14 88.7 3.2 77 314-404 1-81 (81)
59 2eeh_A PDZ domain-containing p 98.8 7.7E-09 2.6E-13 88.0 7.9 75 310-406 21-96 (100)
60 1x5q_A LAP4 protein; PDZ domai 98.8 6.3E-09 2.1E-13 90.1 7.4 82 310-406 25-107 (110)
61 3sfj_A TAX1-binding protein 3; 98.8 7.5E-09 2.6E-13 88.5 7.8 83 310-403 18-104 (104)
62 2pkt_A PDZ and LIM domain prot 98.8 3.6E-09 1.2E-13 88.3 5.1 62 336-407 27-89 (91)
63 2iwq_A Multiple PDZ domain pro 98.8 7.9E-09 2.7E-13 91.6 6.7 82 310-405 35-120 (123)
64 1wh1_A KIAA1095 protein; PDZ d 98.8 2E-09 7E-14 95.4 2.5 79 311-409 32-112 (124)
65 4fgm_A Aminopeptidase N family 98.7 2.9E-08 9.8E-13 110.6 11.6 79 328-417 486-567 (597)
66 1qau_A Neuronal nitric oxide s 98.7 1.3E-08 4.5E-13 88.2 6.7 83 311-416 13-99 (112)
67 2dls_A PDZ-rhogef, RHO guanine 98.7 2.9E-08 9.9E-13 83.3 8.6 59 336-405 29-88 (93)
68 3rle_A Golgi reassembly-stacki 98.7 1.7E-08 5.7E-13 97.8 7.3 85 310-414 94-180 (209)
69 2v90_A PDZ domain-containing p 98.7 5.7E-09 2E-13 88.0 3.3 75 312-407 15-92 (96)
70 2koj_A Partitioning defective 98.7 4.5E-08 1.5E-12 84.7 8.2 80 311-406 22-103 (111)
71 3tsv_A Tight junction protein 98.7 2.7E-08 9.2E-13 88.3 6.6 62 335-406 50-114 (124)
72 1uez_A KIAA1526 protein; PDZ d 98.6 2.6E-08 8.8E-13 84.8 5.6 73 311-405 21-94 (101)
73 2yub_A LIMK-2, LIM domain kina 98.6 5.8E-09 2E-13 91.9 1.6 61 335-407 43-108 (118)
74 2vsp_A PDZ domain-containing p 98.6 1.1E-08 3.8E-13 85.4 3.2 61 335-407 26-89 (91)
75 2h2b_A Tight junction protein 98.6 7.1E-08 2.4E-12 82.9 8.0 62 335-406 38-99 (107)
76 1uf1_A KIAA1526 protein; PDZ d 98.6 2.8E-08 9.7E-13 88.4 5.6 100 390-538 5-106 (128)
77 1ihj_A INAD; intermolecular di 98.6 3.8E-08 1.3E-12 83.1 6.2 61 335-405 36-98 (98)
78 2vwr_A Ligand of NUMB protein 98.6 6.7E-08 2.3E-12 81.2 7.5 72 312-405 17-90 (95)
79 2kom_A Partitioning defective 98.6 6.5E-08 2.2E-12 85.3 7.7 78 312-405 42-121 (121)
80 2l97_A HTRA, putative serine p 98.6 1.8E-07 6.2E-12 84.0 10.7 86 433-538 29-117 (134)
81 1uf1_A KIAA1526 protein; PDZ d 98.6 1.5E-08 5.1E-13 90.2 3.5 70 336-416 46-116 (128)
82 2pa1_A PDZ and LIM domain prot 98.6 2.9E-08 1E-12 82.0 4.8 58 336-405 26-86 (87)
83 2jil_A GRIP1 protein, glutamat 98.6 1.8E-08 6E-13 85.1 3.4 60 335-406 31-94 (97)
84 2uzc_A Human pdlim5, PDZ and L 98.6 4.4E-08 1.5E-12 81.0 5.7 60 336-405 27-87 (88)
85 1zyo_A Serine protease; beta-b 98.6 4.4E-07 1.5E-11 86.3 13.4 139 150-297 27-185 (191)
86 2hga_A Conserved protein MTH13 98.6 7.4E-08 2.5E-12 85.6 7.5 67 335-415 24-90 (125)
87 4amh_A Disks large homolog 1; 98.6 7.6E-08 2.6E-12 82.8 7.3 70 335-414 31-103 (106)
88 2awx_A Synapse associated prot 98.6 5.6E-08 1.9E-12 83.3 6.5 69 335-413 32-102 (105)
89 2he4_A Na(+)/H(+) exchange reg 98.6 4E-08 1.4E-12 81.7 5.3 70 312-405 16-88 (90)
90 2opg_A Multiple PDZ domain pro 98.6 1.1E-07 3.7E-12 80.3 8.0 77 311-407 15-93 (98)
91 2edz_A PDZ domain-containing p 98.6 4.1E-09 1.4E-13 92.0 -1.1 68 335-412 37-105 (114)
92 3bpu_A Membrane-associated gua 98.6 9.1E-08 3.1E-12 79.1 6.9 71 312-405 15-87 (88)
93 1m5z_A GRIP, AMPA receptor int 98.6 1.1E-07 3.9E-12 79.0 7.1 59 335-403 31-90 (91)
94 2qkv_A Inactivation-NO-after-p 98.6 1.4E-07 4.9E-12 79.5 7.7 59 335-403 30-90 (96)
95 1n7e_A AMPA receptor interacti 98.5 1.2E-07 4.1E-12 80.0 7.1 61 336-406 30-92 (97)
96 2jxo_A Ezrin-radixin-moesin-bi 98.5 1.8E-08 6.3E-13 85.2 1.9 60 335-405 32-94 (98)
97 1nf3_C PAR-6B; semi-CRIB motif 98.5 1.1E-08 3.9E-13 91.1 0.6 83 311-405 42-126 (128)
98 2f5y_A Regulator of G-protein 98.5 2.1E-07 7.1E-12 77.6 8.2 62 336-407 24-86 (91)
99 1rgw_A ZAsp protein; PDZ, cyph 98.5 7E-08 2.4E-12 79.2 5.2 60 336-405 25-85 (85)
100 1b8q_A Protein (neuronal nitri 98.5 2.3E-08 7.8E-13 88.9 2.3 81 311-414 20-104 (127)
101 1vb7_A PDZ and LIM domain 2; P 98.5 4E-08 1.4E-12 82.5 3.5 60 335-406 29-91 (94)
102 2q3g_A PDZ and LIM domain prot 98.5 1.1E-07 3.8E-12 78.8 5.9 60 336-405 27-87 (89)
103 2eeg_A PDZ and LIM domain prot 98.5 8.4E-08 2.9E-12 80.5 5.2 61 335-405 31-92 (94)
104 1x5n_A Harmonin; PDZ domain, u 98.5 3.3E-08 1.1E-12 86.0 2.6 77 312-410 28-106 (114)
105 1wf7_A Enigma homologue protei 98.5 1.9E-08 6.7E-13 85.9 1.0 67 336-412 29-96 (103)
106 2pzd_A Serine protease HTRA2; 98.5 4.5E-07 1.6E-11 78.6 9.8 88 434-539 7-94 (113)
107 2i04_A Membrane-associated gua 98.5 1.5E-07 5.1E-12 77.2 6.2 60 335-402 24-85 (85)
108 2la8_A Inactivation-NO-after-p 98.5 1.6E-07 5.5E-12 80.9 6.7 60 335-404 24-85 (106)
109 3khf_A Microtubule-associated 98.5 7E-08 2.4E-12 81.7 4.2 59 337-405 35-94 (99)
110 2fe5_A Presynaptic protein SAP 98.5 1.7E-07 5.9E-12 78.3 6.6 61 335-405 32-94 (94)
111 2e7k_A Maguk P55 subfamily mem 98.5 1.1E-07 3.9E-12 79.4 5.3 68 310-403 17-87 (91)
112 1um1_A KIAA1849 protein, RSGI 98.5 2.5E-08 8.7E-13 86.2 1.3 68 335-412 35-104 (110)
113 3r68_A Na(+)/H(+) exchange reg 98.5 1.9E-07 6.5E-12 78.2 6.6 59 336-406 29-90 (95)
114 2ejy_A 55 kDa erythrocyte memb 98.5 1.7E-07 5.7E-12 79.5 6.2 67 312-403 25-95 (97)
115 2qbw_A PDZ-fibronectin fusion 98.5 4.1E-07 1.4E-11 86.5 9.7 72 335-416 23-97 (195)
116 1wif_A RSGI RUH-020, riken cDN 98.5 6.5E-08 2.2E-12 86.1 3.8 58 336-403 49-110 (126)
117 3axa_A Afadin, nectin-3, prote 98.5 3.3E-07 1.1E-11 78.5 8.1 62 335-406 37-100 (106)
118 1v5l_A PDZ and LIM domain 3; a 98.5 3.6E-08 1.2E-12 84.3 1.8 59 336-406 29-90 (103)
119 1ujd_A KIAA0559 protein; PDZ d 98.5 1.3E-07 4.5E-12 82.8 5.4 61 336-406 49-111 (117)
120 2yt7_A Amyloid beta A4 precurs 98.5 2E-07 6.9E-12 79.3 6.4 74 311-403 21-98 (101)
121 1wi2_A Riken cDNA 2700099C19; 98.5 1.7E-07 5.7E-12 80.2 5.9 71 311-405 27-100 (104)
122 2ego_A General receptor for ph 98.5 1.9E-07 6.3E-12 78.7 6.1 56 336-403 37-95 (96)
123 3ngh_A PDZ domain-containing p 98.5 9.2E-08 3.1E-12 82.0 4.2 62 335-406 25-87 (106)
124 1ujv_A Membrane associated gua 98.5 4.4E-07 1.5E-11 76.6 8.2 60 336-405 32-92 (96)
125 1tp5_A Presynaptic density pro 98.4 2.8E-07 9.7E-12 80.7 7.2 71 313-405 27-99 (119)
126 2dmz_A INAD-like protein; PDZ 98.4 1.2E-07 4E-12 84.5 4.7 78 311-406 27-108 (129)
127 2p3w_A Probable serine proteas 98.4 5.1E-07 1.7E-11 78.2 8.7 87 434-538 7-93 (112)
128 1mfg_A ERB-B2 interacting prot 98.4 3.2E-07 1.1E-11 76.9 7.1 60 335-404 34-93 (95)
129 1ueq_A Membrane associated gua 98.4 2E-07 6.8E-12 82.4 6.0 63 335-405 43-107 (123)
130 2jik_A Synaptojanin-2 binding 98.4 2.8E-07 9.6E-12 78.2 6.8 61 335-405 36-98 (101)
131 1uep_A Membrane associated gua 98.4 9.6E-08 3.3E-12 81.6 3.8 63 335-405 33-97 (103)
132 2jre_A C60-1 PDZ domain peptid 98.4 8.3E-08 2.8E-12 82.6 3.4 80 311-406 25-106 (108)
133 1v5q_A GRIP1 homolog, glutamat 98.4 1.1E-07 3.8E-12 83.9 4.0 60 336-405 45-108 (122)
134 3i4w_A Disks large homolog 4; 98.4 4.6E-07 1.6E-11 77.1 7.7 60 336-405 35-96 (104)
135 3stj_A Protease DEGQ; serine p 98.4 5.2E-07 1.8E-11 93.9 9.6 94 433-548 240-334 (345)
136 2i1n_A Discs, large homolog 3; 98.4 2.7E-07 9.2E-12 78.5 6.1 62 335-406 33-96 (102)
137 2o2t_A Multiple PDZ domain pro 98.4 3.1E-08 1.1E-12 86.6 0.1 61 335-407 48-113 (117)
138 1va8_A Maguk P55 subfamily mem 98.4 2.9E-07 9.9E-12 80.0 6.3 69 312-406 38-110 (113)
139 3i18_A LMO2051 protein; alpha- 98.4 7.2E-07 2.4E-11 75.8 8.6 62 477-539 6-68 (100)
140 2r4h_A Membrane-associated gua 98.4 3.2E-07 1.1E-11 79.6 6.6 62 335-406 48-111 (112)
141 1p3c_A Glutamyl-endopeptidase; 98.4 1.4E-06 4.7E-11 83.9 11.6 127 150-277 30-190 (215)
142 2q9v_A Membrane-associated gua 98.4 1.6E-07 5.5E-12 77.9 4.0 62 335-404 26-89 (90)
143 1d5g_A Human phosphatase HPTP1 98.4 2.8E-07 9.7E-12 77.4 5.6 61 335-405 32-94 (96)
144 2d90_A PDZ domain containing p 98.4 2.2E-07 7.6E-12 79.1 4.9 62 335-406 29-91 (102)
145 1wf8_A Neurabin-I; PDZ domain, 98.4 3.3E-07 1.1E-11 78.8 6.0 61 335-405 39-101 (107)
146 1wfg_A Regulating synaptic mem 98.4 3E-07 1E-11 82.3 5.8 62 336-405 65-128 (131)
147 2iwn_A Multiple PDZ domain pro 98.4 4.3E-07 1.5E-11 76.1 6.5 79 310-405 14-94 (97)
148 2qg1_A Multiple PDZ domain pro 98.4 3.9E-07 1.3E-11 75.9 6.1 61 335-405 28-90 (92)
149 2djt_A Unnamed protein product 98.4 2.3E-07 7.9E-12 79.2 4.8 62 335-406 37-100 (104)
150 2kl1_A YLBL protein; structure 98.4 4.3E-07 1.5E-11 76.3 6.4 61 477-538 4-65 (94)
151 2i6v_A General secretion pathw 98.4 6.2E-07 2.1E-11 74.1 7.0 62 478-539 19-81 (87)
152 1q7x_A PDZ2B domain of PTP-BAS 98.4 4.4E-07 1.5E-11 78.0 6.2 62 335-406 41-104 (108)
153 1kwa_A Hcask/LIN-2 protein; PD 98.4 4E-07 1.4E-11 75.5 5.7 70 311-405 13-86 (88)
154 2fne_A Multiple PDZ domain pro 98.4 3.2E-07 1.1E-11 80.5 5.3 61 336-406 53-115 (117)
155 2kv8_A RGS12, regulator of G-p 98.3 2.5E-07 8.5E-12 75.6 4.0 58 336-403 23-81 (83)
156 2dlu_A INAD-like protein; PDZ 98.3 5.9E-07 2E-11 77.6 6.6 61 336-406 38-100 (111)
157 2kjd_A Sodium/hydrogen exchang 98.3 2.9E-07 9.8E-12 81.7 4.5 74 312-408 21-97 (128)
158 2byg_A Channel associated prot 98.3 6.6E-07 2.3E-11 78.3 6.7 61 335-405 53-115 (117)
159 2kjp_A Uncharacterized protein 98.3 1.9E-07 6.5E-12 78.2 3.0 59 479-538 2-61 (91)
160 3qik_A Phosphatidylinositol 3, 98.3 3.3E-07 1.1E-11 77.9 4.3 57 335-401 38-98 (101)
161 2daz_A INAD-like protein; PDZ 98.3 8.2E-07 2.8E-11 78.4 7.1 61 336-406 51-113 (124)
162 2vsv_A Rhophilin-2; scaffold p 98.3 5.4E-07 1.8E-11 78.1 5.7 59 336-405 44-105 (109)
163 2g5m_B Neurabin-2; spinophilin 98.3 3E-07 1E-11 79.7 4.1 64 335-408 34-99 (113)
164 2kpk_A Membrane-associated gua 98.3 7.4E-07 2.5E-11 79.3 6.7 62 336-405 43-106 (129)
165 3cbz_A Dishevelled-2; PDZ doma 98.3 4.1E-07 1.4E-11 78.5 4.8 64 335-406 32-98 (108)
166 1q3o_A Shank1; PDZ, GKAP, pept 98.3 7.2E-07 2.5E-11 76.8 6.3 56 336-403 45-103 (109)
167 2iwo_A Multiple PDZ domain pro 98.3 1.7E-07 5.9E-12 82.5 2.4 62 336-407 53-116 (120)
168 2eno_A Synaptojanin-2-binding 98.3 7.6E-07 2.6E-11 78.1 6.4 100 283-405 7-108 (120)
169 1wha_A KIAA0147 protein, scrib 98.3 4E-07 1.4E-11 77.9 4.4 61 335-405 37-99 (105)
170 2rcz_A Tight junction protein 98.3 7.8E-07 2.7E-11 71.8 6.0 58 478-536 21-81 (81)
171 1y7n_A Amyloid beta A4 precurs 98.3 2E-07 6.8E-12 77.9 2.4 54 337-403 33-89 (90)
172 1n7t_A 99-MER peptide of densi 98.3 6.1E-07 2.1E-11 76.5 5.5 60 335-404 42-101 (103)
173 2edv_A FERM and PDZ domain-con 98.3 4.3E-07 1.5E-11 76.5 4.2 60 335-404 30-89 (96)
174 2pa1_A PDZ and LIM domain prot 98.3 1.3E-06 4.5E-11 71.9 6.8 59 478-537 26-86 (87)
175 1pq7_A Trypsin; ultra-high res 98.3 1.9E-05 6.3E-10 76.5 15.8 128 150-277 24-199 (224)
176 1g9o_A NHE-RF; PDZ domain, com 98.3 7.5E-07 2.6E-11 74.0 4.9 73 312-405 15-88 (91)
177 1uew_A Membrane associated gua 98.3 6.2E-07 2.1E-11 77.9 4.6 58 337-406 44-105 (114)
178 1whd_A RGS3, regulator of G-pr 98.2 5.9E-07 2E-11 76.3 4.1 60 336-405 36-96 (100)
179 3kzd_A TIAM-1, T-lymphoma inva 98.2 9.4E-07 3.2E-11 74.4 5.2 51 311-371 20-71 (94)
180 3id1_A Regulator of sigma E pr 98.2 1.8E-06 6E-11 72.8 6.9 79 480-558 4-90 (95)
181 1te0_A Protease DEGS; two doma 98.2 2E-06 6.7E-11 88.5 8.7 84 433-538 221-305 (318)
182 2eaq_A LIM domain only protein 98.2 1.1E-06 3.6E-11 72.9 5.5 60 478-537 28-90 (90)
183 1wg6_A Hypothetical protein (r 98.2 5.5E-07 1.9E-11 80.0 3.9 80 311-405 37-123 (127)
184 1wfv_A Membrane associated gua 98.2 3.5E-07 1.2E-11 77.7 2.5 60 336-405 36-97 (103)
185 1v62_A KIAA1719 protein; struc 98.2 4.5E-07 1.5E-11 79.4 3.2 57 337-405 43-103 (117)
186 4a8c_A Periplasmic PH-dependen 98.2 1.9E-06 6.5E-11 92.5 8.7 69 336-416 363-432 (436)
187 1gvz_A Kallikrein-1E2; antigen 98.2 2.9E-05 9.8E-10 75.8 16.4 84 150-235 24-135 (237)
188 2yuy_A RHO GTPase activating p 98.2 1.8E-07 6.2E-12 83.0 0.5 59 335-405 60-121 (126)
189 3e17_A Tight junction protein 98.2 5.7E-07 2E-11 74.6 3.2 65 328-403 14-80 (88)
190 2dm8_A INAD-like protein; PDZ 98.2 8.8E-07 3E-11 77.1 4.6 61 336-406 43-105 (116)
191 3nfk_A Tyrosine-protein phosph 98.2 1.1E-06 3.6E-11 75.4 5.0 60 336-403 43-107 (107)
192 3qe1_A Sorting nexin-27, G pro 98.2 9.7E-07 3.3E-11 75.7 4.6 59 337-405 44-103 (107)
193 1fc6_A Photosystem II D1 prote 98.2 6.7E-06 2.3E-10 86.8 12.0 85 310-414 84-172 (388)
194 1uju_A Scribble; PDZ domain, c 98.2 3.6E-07 1.2E-11 79.1 1.8 61 335-405 43-105 (111)
195 2zpm_A Regulator of sigma E pr 98.2 1.4E-06 4.8E-11 72.3 5.4 59 480-538 6-64 (91)
196 3mfj_A Cationic trypsin; serin 98.2 3.8E-05 1.3E-09 74.3 16.3 85 150-236 23-124 (223)
197 1fxy_A Coagulation factor XA-t 98.2 2.2E-05 7.6E-10 76.2 14.6 86 150-235 25-127 (228)
198 1qav_A Alpha-1 syntrophin (res 98.2 2.1E-06 7.2E-11 71.1 6.2 57 336-402 30-88 (90)
199 2v90_A PDZ domain-containing p 98.2 3.6E-06 1.2E-10 70.5 7.7 60 477-537 29-90 (96)
200 2ehr_A INAD-like protein; PDZ 98.2 1.7E-06 5.7E-11 75.5 5.8 61 335-405 49-111 (117)
201 2db5_A INAD-like protein; PDZ 98.2 7.8E-07 2.7E-11 79.0 3.7 60 336-405 54-116 (128)
202 2dkr_A LIN-7 homolog B; LIN-7B 98.2 1.4E-06 4.9E-11 72.5 5.0 60 335-404 29-90 (93)
203 2pkt_A PDZ and LIM domain prot 98.2 1.7E-06 5.9E-11 71.8 5.5 59 478-537 27-87 (91)
204 3gsl_A Disks large homolog 4; 98.2 1E-06 3.5E-11 83.2 4.6 62 335-408 129-194 (196)
205 4i8h_A Cationic trypsin, beta- 98.2 3.5E-05 1.2E-09 74.2 15.6 152 150-302 23-220 (223)
206 1uhp_A Hypothetical protein KI 98.2 2.1E-06 7.1E-11 73.7 6.1 61 335-405 40-102 (107)
207 1hj8_A Trypsin I; hydrolase, r 98.2 4.3E-05 1.5E-09 73.9 16.2 85 150-236 23-124 (222)
208 2gzv_A PRKCA-binding protein; 98.2 2.9E-06 9.8E-11 73.9 7.0 70 310-402 35-108 (114)
209 3b76_A E3 ubiquitin-protein li 98.2 1.8E-06 6.3E-11 75.7 5.7 60 335-404 52-113 (118)
210 3cyy_A Tight junction protein 98.2 3.9E-06 1.3E-10 69.6 7.4 60 478-538 23-85 (92)
211 2csj_A TJP2 protein; PDZ domai 98.2 1.1E-06 3.8E-11 76.7 4.3 61 335-405 45-105 (117)
212 2i4s_A General secretion pathw 98.2 2.5E-06 8.6E-11 73.1 6.3 62 478-539 37-99 (105)
213 1wi4_A Synip, syntaxin binding 98.2 8.8E-07 3E-11 76.6 3.5 62 336-405 41-106 (109)
214 3k1r_A Harmonin; protein-prote 98.2 1.4E-06 4.8E-11 82.9 5.1 59 336-405 110-169 (192)
215 2edp_A Fragment, shroom family 98.2 1.5E-06 5.3E-11 73.6 4.9 59 336-405 35-95 (100)
216 2zch_P Prostate-specific antig 98.1 4.7E-05 1.6E-09 74.2 16.1 152 150-302 24-233 (237)
217 1x6d_A Interleukin-16; PDZ dom 98.1 4E-07 1.4E-11 79.8 1.1 63 335-406 41-105 (119)
218 2vz5_A TAX1-binding protein 3; 98.1 1.8E-06 6.3E-11 77.9 5.4 63 477-539 63-127 (139)
219 2d92_A INAD-like protein; PDZ 98.1 1.8E-06 6.3E-11 74.2 5.1 60 335-403 43-104 (108)
220 2uzc_A Human pdlim5, PDZ and L 98.1 3.1E-06 1.1E-10 69.7 6.2 59 478-537 27-87 (88)
221 1ihj_A INAD; intermolecular di 98.1 3.3E-06 1.1E-10 71.0 6.5 60 477-537 36-98 (98)
222 1ton_A Tonin; hydrolase(serine 98.1 0.00011 3.7E-09 71.5 18.3 150 150-302 22-231 (235)
223 1wh1_A KIAA1095 protein; PDZ d 98.1 2E-06 7E-11 75.9 5.3 60 478-537 48-108 (124)
224 2eei_A PDZ domain-containing p 98.1 8.9E-07 3E-11 75.8 2.9 61 335-405 31-92 (106)
225 3l4f_D SH3 and multiple ankyri 98.1 2.6E-06 8.9E-11 76.2 6.0 61 336-406 65-126 (132)
226 3pv2_A DEGQ; trypsin fold, PDZ 98.1 7.3E-06 2.5E-10 88.3 10.7 86 433-539 258-344 (451)
227 2jxo_A Ezrin-radixin-moesin-bi 98.1 2.1E-06 7E-11 72.4 5.0 60 478-537 33-94 (98)
228 2qt5_A Glutamate receptor-inte 98.1 1.5E-06 5.3E-11 82.9 4.6 61 335-407 134-198 (200)
229 2fcf_A Multiple PDZ domain pro 98.1 6.1E-06 2.1E-10 70.0 7.8 59 478-537 39-100 (103)
230 3o46_A Maguk P55 subfamily mem 98.1 2.3E-06 7.9E-11 71.4 5.1 59 335-405 27-89 (93)
231 2jil_A GRIP1 protein, glutamat 98.1 3.9E-06 1.3E-10 70.4 6.4 60 477-537 31-93 (97)
232 1azz_A Collagenase; complex (s 98.1 4.1E-05 1.4E-09 74.2 14.6 151 150-301 24-221 (226)
233 3soe_A Membrane-associated gua 98.1 1.1E-05 3.9E-10 70.1 9.3 61 336-406 34-95 (113)
234 1npm_A Neuropsin; serine prote 98.1 5.2E-05 1.8E-09 73.4 15.2 84 150-235 24-127 (225)
235 2z17_A Pleckstrin homology SEC 98.1 1.1E-06 3.8E-11 75.0 2.8 72 313-400 29-103 (104)
236 1vae_A Rhophilin 2, rhophilin, 98.1 1E-06 3.6E-11 76.4 2.6 56 336-402 36-94 (111)
237 3tsz_A Tight junction protein 98.1 2.1E-06 7.2E-11 90.8 5.5 63 335-405 30-93 (391)
238 2vsp_A PDZ domain-containing p 98.1 2.3E-06 7.8E-11 71.1 4.5 59 478-537 27-87 (91)
239 2qxi_A Kallikrein-7; S1 pocket 98.1 7.4E-05 2.5E-09 72.3 15.9 84 151-236 25-123 (224)
240 2eeh_A PDZ domain-containing p 98.1 8.1E-06 2.8E-10 69.0 7.8 58 478-537 36-95 (100)
241 3s9c_A Vipera russelli protein 98.1 0.00011 3.8E-09 71.2 16.8 153 150-305 26-227 (234)
242 1lo6_A Kallikrein 6, HK6; seri 98.1 0.00016 5.6E-09 69.8 17.9 150 150-302 24-220 (223)
243 1vb7_A PDZ and LIM domain 2; P 98.1 2.7E-06 9.4E-11 71.1 4.3 59 478-537 30-90 (94)
244 2psx_A Kallikrein-5; zinc inhi 98.0 0.00011 3.6E-09 71.3 16.3 84 150-235 25-126 (227)
245 1a7s_A Heparin binding protein 98.0 0.00029 1E-08 67.9 19.3 151 150-303 24-218 (225)
246 1aut_C Activated protein C; se 98.0 0.00016 5.3E-09 71.2 17.6 85 150-235 25-133 (250)
247 1fuj_A PR3, myeloblastin; hydr 98.0 0.00014 4.6E-09 70.0 16.8 125 150-275 27-192 (221)
248 4e7n_A Snake-venom thrombin-li 98.0 0.00017 5.8E-09 69.9 17.6 153 150-303 26-229 (238)
249 2hga_A Conserved protein MTH13 98.0 1.2E-05 4.1E-10 71.2 8.4 60 476-537 23-83 (125)
250 1cgh_A Cathepsin G; inflammati 98.0 0.00022 7.6E-09 68.8 18.3 84 150-235 27-129 (224)
251 1um7_A Synapse-associated prot 98.0 1.8E-06 6.3E-11 74.5 3.0 60 336-405 39-100 (113)
252 1lcy_A HTRA2 serine protease; 98.0 1.3E-05 4.5E-10 82.5 10.0 89 433-539 227-315 (325)
253 2yub_A LIMK-2, LIM domain kina 98.0 4.3E-06 1.5E-10 73.3 5.4 60 477-537 43-106 (118)
254 2he4_A Na(+)/H(+) exchange reg 98.0 6.3E-06 2.1E-10 68.2 6.1 58 478-536 28-87 (90)
255 1kwa_A Hcask/LIN-2 protein; PD 98.0 6.2E-06 2.1E-10 68.2 6.1 58 479-537 26-86 (88)
256 3beu_A Trypsin, SGT; beta shee 98.0 0.00011 3.7E-09 70.8 15.9 83 150-235 20-119 (224)
257 3r0h_A INAD, inactivation-NO-a 98.0 8.5E-06 2.9E-10 77.8 7.9 59 335-403 135-195 (206)
258 4ag1_A Chymase; hydrolase-de n 98.0 0.00047 1.6E-08 66.3 20.5 147 150-301 28-222 (226)
259 3rp2_A RAT MAST cell protease 98.0 0.00027 9.1E-09 68.0 18.6 146 150-300 28-221 (224)
260 2d8i_A T-cell lymphoma invasio 98.0 2.9E-06 1E-10 74.0 4.2 68 313-404 31-101 (114)
261 1iau_A Granzyme B; hydrolase-h 98.0 0.00018 6.3E-09 69.5 17.5 84 150-235 27-129 (227)
262 3s69_A Thrombin-like enzyme de 98.0 0.00017 5.8E-09 69.7 17.3 154 150-304 24-226 (234)
263 1ueq_A Membrane associated gua 98.0 6.3E-06 2.1E-10 72.6 6.2 65 478-542 44-112 (123)
264 2iwq_A Multiple PDZ domain pro 98.0 1.3E-05 4.5E-10 70.7 8.1 60 477-537 58-120 (123)
265 2xw9_A Complement factor D; im 98.0 0.00014 4.6E-09 70.4 16.2 86 150-235 24-130 (228)
266 3bpu_A Membrane-associated gua 98.0 7.7E-06 2.6E-10 67.3 6.1 58 478-537 27-87 (88)
267 3sfj_A TAX1-binding protein 3; 98.0 1.2E-05 4E-10 68.4 7.3 60 476-535 43-104 (104)
268 2koj_A Partitioning defective 98.0 7.7E-06 2.6E-10 70.4 6.3 64 478-541 39-106 (111)
269 1p1d_A PDZ45, glutamate recept 98.0 3.3E-06 1.1E-10 80.4 4.2 73 311-404 119-195 (196)
270 2q3g_A PDZ and LIM domain prot 98.0 9.8E-06 3.3E-10 66.9 6.4 59 478-537 27-87 (89)
271 3fzz_A Granzyme C; hydrolase, 98.0 0.00035 1.2E-08 67.2 18.6 84 150-235 28-130 (227)
272 3cbz_A Dishevelled-2; PDZ doma 98.0 1.2E-05 4E-10 69.2 7.1 60 478-537 33-97 (108)
273 4e34_A Golgi-associated PDZ an 98.0 7.2E-06 2.5E-10 67.3 5.5 57 336-402 28-86 (87)
274 2bdg_A Kallikrein-4; serine pr 98.0 0.00023 7.9E-09 68.7 17.2 85 150-236 24-126 (223)
275 1ao5_A Glandular kallikrein-13 98.0 0.00022 7.6E-09 69.3 17.2 149 150-301 24-232 (237)
276 2aiq_A Protein C activator; sn 98.0 8.2E-05 2.8E-09 72.3 14.0 153 150-303 23-222 (231)
277 2kom_A Partitioning defective 98.0 1.2E-05 4E-10 70.7 7.0 59 478-536 58-120 (121)
278 2krg_A Na(+)/H(+) exchange reg 98.0 1.5E-06 5.3E-11 84.3 1.5 60 336-407 33-96 (216)
279 3egg_C Spinophilin; PP1, serin 98.0 7.7E-06 2.6E-10 76.4 6.2 59 335-403 110-170 (170)
280 1v5l_A PDZ and LIM domain 3; a 98.0 4.9E-06 1.7E-10 70.8 4.5 60 478-538 29-90 (103)
281 1sgf_A 7S NGF, nerve growth fa 98.0 0.00012 4E-09 71.6 15.0 152 150-302 27-236 (240)
282 2i04_A Membrane-associated gua 98.0 1.7E-05 5.9E-10 64.7 7.5 57 478-534 25-85 (85)
283 3tsv_A Tight junction protein 98.0 1E-05 3.4E-10 71.6 6.5 60 478-537 51-113 (124)
284 3shw_A Tight junction protein 98.0 5.1E-06 1.7E-10 89.5 5.4 63 335-405 22-85 (468)
285 3khf_A Microtubule-associated 98.0 1.4E-05 4.6E-10 67.4 7.0 58 479-537 35-94 (99)
286 3hpk_A Protein interacting wit 98.0 7.6E-06 2.6E-10 72.2 5.6 58 335-402 44-103 (125)
287 2fne_A Multiple PDZ domain pro 98.0 1.2E-05 4E-10 70.4 6.7 60 478-538 53-115 (117)
288 1g9o_A NHE-RF; PDZ domain, com 98.0 7.9E-06 2.7E-10 67.7 5.3 60 478-537 27-88 (91)
289 2cs5_A Tyrosine-protein phosph 98.0 2.2E-06 7.6E-11 74.9 2.0 63 336-406 41-108 (119)
290 2z7f_E Leukocyte elastase; ser 98.0 0.00029 9.9E-09 67.7 17.3 124 150-275 24-189 (218)
291 3ncl_A Suppressor of tumorigen 98.0 0.00015 5.1E-09 70.5 15.4 86 150-235 25-138 (241)
292 2byg_A Channel associated prot 98.0 1.2E-05 4E-10 70.3 6.7 61 477-538 53-116 (117)
293 1qau_A Neuronal nitric oxide s 98.0 1.4E-05 4.7E-10 69.0 7.0 60 478-537 26-88 (112)
294 1spj_A Kallikrein 1; serine pr 97.9 0.00013 4.3E-09 71.1 14.8 84 150-235 24-136 (238)
295 3cp7_A Alkaline serine proteas 97.9 0.00014 4.8E-09 70.4 14.8 163 125-301 8-214 (218)
296 1v6b_A Harmonin isoform A1; st 97.9 1.6E-06 5.4E-11 76.0 0.7 59 337-403 44-106 (118)
297 1eq9_A Chymotrypsin; FIRE ANT, 97.9 0.00011 3.9E-09 70.8 13.9 86 150-235 24-127 (222)
298 2jre_A C60-1 PDZ domain peptid 97.9 8.2E-06 2.8E-10 69.9 5.0 59 478-537 44-105 (108)
299 1uep_A Membrane associated gua 97.9 8.1E-06 2.8E-10 69.5 4.8 60 478-537 34-97 (103)
300 2w4f_A Protein LAP4; structura 97.9 7.8E-06 2.7E-10 68.5 4.6 62 477-538 33-95 (97)
301 1bru_P Elastase, PPE; serine p 97.9 0.00034 1.2E-08 68.3 17.0 86 150-235 28-134 (241)
302 1d5g_A Human phosphatase HPTP1 97.9 2.1E-05 7.2E-10 65.7 7.2 59 478-537 33-94 (96)
303 1gvk_B Elastase 1, peptide inh 97.9 0.00034 1.2E-08 68.2 16.9 86 150-235 28-134 (240)
304 2vsv_A Rhophilin-2; scaffold p 97.9 1.8E-05 6.3E-10 68.3 6.9 57 480-536 46-104 (109)
305 2ego_A General receptor for ph 97.9 2.6E-05 9E-10 65.3 7.7 58 477-535 36-95 (96)
306 1rgw_A ZAsp protein; PDZ, cyph 97.9 9.3E-06 3.2E-10 66.3 4.7 57 479-536 26-84 (85)
307 1mza_A Pro-granzyme K; apoptos 97.9 0.00039 1.3E-08 67.7 17.3 86 150-235 26-132 (240)
308 3gov_B MAsp-1; complement, ser 97.9 0.00029 9.8E-09 68.7 16.3 86 150-235 25-143 (251)
309 2yt7_A Amyloid beta A4 precurs 97.9 2.5E-05 8.6E-10 66.2 7.5 57 479-535 38-98 (101)
310 1ujv_A Membrane associated gua 97.9 2.8E-05 9.5E-10 65.4 7.7 57 479-537 33-92 (96)
311 2hlc_A Collagenase; serine pro 97.9 0.00047 1.6E-08 66.7 17.6 86 150-236 28-131 (230)
312 1v5q_A GRIP1 homolog, glutamat 97.9 1.3E-05 4.5E-10 70.4 5.9 59 479-537 46-108 (122)
313 1x5n_A Harmonin; PDZ domain, u 97.9 2.7E-05 9.1E-10 67.4 7.7 57 478-536 41-100 (114)
314 2dc2_A GOPC, golgi associated 97.9 1.4E-05 4.7E-10 68.1 5.7 60 336-405 35-96 (103)
315 3h7t_A Group 3 allergen smipp- 97.9 0.00023 7.9E-09 68.7 15.2 151 150-302 24-228 (235)
316 2fe5_A Presynaptic protein SAP 97.9 2.5E-05 8.4E-10 65.0 7.1 59 477-536 32-93 (94)
317 1elt_A Elastase; serine protei 97.9 0.00023 8E-09 69.2 15.2 86 150-235 28-134 (236)
318 2r0l_A Hepatocyte growth facto 97.9 0.00029 9.9E-09 69.0 16.0 86 150-235 23-135 (248)
319 1x5q_A LAP4 protein; PDZ domai 97.9 2.7E-05 9.1E-10 66.9 7.5 60 477-537 45-106 (110)
320 2ejy_A 55 kDa erythrocyte memb 97.9 1.4E-05 4.7E-10 67.6 5.5 57 478-535 36-95 (97)
321 1wi4_A Synip, syntaxin binding 97.9 1.6E-05 5.5E-10 68.5 6.0 59 479-537 42-106 (109)
322 1wfg_A Regulating synaptic mem 97.9 0.0001 3.4E-09 65.7 11.4 112 392-536 12-127 (131)
323 2o2t_A Multiple PDZ domain pro 97.9 1.3E-05 4.4E-10 69.7 5.4 59 478-537 49-111 (117)
324 3mhw_U Urokinase-type plasmino 97.9 0.00091 3.1E-08 65.0 19.2 86 150-235 29-142 (247)
325 1i16_A Interleukin 16, LCF; cy 97.9 9.5E-06 3.3E-10 72.2 4.4 62 335-405 56-119 (130)
326 2kjd_A Sodium/hydrogen exchang 97.9 1.4E-05 4.9E-10 70.5 5.5 60 478-537 33-94 (128)
327 1si5_H Scatter factor, hepatoc 97.9 0.0012 3.9E-08 64.4 19.8 154 150-303 23-227 (240)
328 1t8o_A Chymotrypsin A; chymotr 97.9 0.00047 1.6E-08 67.5 17.0 85 150-235 40-143 (245)
329 2dmz_A INAD-like protein; PDZ 97.8 1.9E-05 6.5E-10 69.9 6.2 60 477-537 45-107 (129)
330 2jkh_A Activated factor XA hea 97.8 0.00016 5.4E-09 70.6 13.4 85 150-234 25-131 (241)
331 1ujd_A KIAA0559 protein; PDZ d 97.8 1.8E-05 6.1E-10 69.0 5.8 61 478-539 49-112 (117)
332 1n7e_A AMPA receptor interacti 97.8 2.7E-05 9.3E-10 65.3 6.7 59 478-537 30-91 (97)
333 1wi2_A Riken cDNA 2700099C19; 97.8 2.4E-05 8.4E-10 66.6 6.4 57 478-536 41-99 (104)
334 2d90_A PDZ domain containing p 97.8 2.5E-05 8.5E-10 66.2 6.4 58 478-536 30-89 (102)
335 2edz_A PDZ domain-containing p 97.8 1.2E-05 4.2E-10 69.6 4.5 58 478-536 38-97 (114)
336 2f91_A Hepatopancreas trypsin; 97.8 0.00051 1.7E-08 66.8 16.7 85 151-235 29-135 (237)
337 3o46_A Maguk P55 subfamily mem 97.8 3.2E-05 1.1E-09 64.3 6.9 58 479-537 29-89 (93)
338 2i1n_A Discs, large homolog 3; 97.8 3E-05 1E-09 65.6 6.8 60 477-537 33-95 (102)
339 2f5y_A Regulator of G-protein 97.8 2.8E-05 9.7E-10 64.4 6.5 58 480-538 26-85 (91)
340 1uew_A Membrane associated gua 97.8 2.2E-05 7.5E-10 68.0 6.0 58 480-538 45-105 (114)
341 2r4h_A Membrane-associated gua 97.8 4.2E-05 1.5E-09 66.1 7.8 60 478-538 49-111 (112)
342 2d92_A INAD-like protein; PDZ 97.8 3E-05 1E-09 66.5 6.8 59 477-535 43-104 (108)
343 2asu_B Hepatocyte growth facto 97.8 0.00066 2.2E-08 66.0 17.3 86 150-235 22-126 (234)
344 1r6j_A Syntenin 1; PDZ, membra 97.8 1.6E-05 5.6E-10 65.0 4.8 53 340-402 27-80 (82)
345 2q9v_A Membrane-associated gua 97.8 1.7E-05 5.9E-10 65.4 5.1 58 479-536 28-89 (90)
346 1euf_A Duodenase; serine prote 97.8 0.00048 1.6E-08 66.6 16.2 84 150-235 27-129 (227)
347 3k50_A Putative S41 protease; 97.8 1.2E-05 4.2E-10 85.1 5.2 57 337-406 91-148 (403)
348 1orf_A Granzyme A; hydrolase-h 97.8 0.00055 1.9E-08 66.4 16.7 85 150-235 24-127 (234)
349 3r68_A Na(+)/H(+) exchange reg 97.8 1.6E-05 5.4E-10 66.3 4.8 60 479-538 30-91 (95)
350 2djt_A Unnamed protein product 97.8 2E-05 6.9E-10 66.9 5.5 59 478-537 38-99 (104)
351 2h2b_A Tight junction protein 97.8 2.7E-05 9.1E-10 66.5 6.1 61 477-538 38-99 (107)
352 2jik_A Synaptojanin-2 binding 97.8 2.3E-05 8E-10 66.2 5.7 59 478-537 37-98 (101)
353 2opg_A Multiple PDZ domain pro 97.8 3.8E-05 1.3E-09 64.4 7.0 59 478-537 30-91 (98)
354 1mfg_A ERB-B2 interacting prot 97.8 5.2E-05 1.8E-09 63.2 7.8 58 477-536 34-93 (95)
355 3ngh_A PDZ domain-containing p 97.8 1.1E-05 3.8E-10 68.8 3.6 58 478-536 26-85 (106)
356 1va8_A Maguk P55 subfamily mem 97.8 2.9E-05 1E-09 67.2 6.3 58 479-537 49-109 (113)
357 2jde_A Urokinase-type plasmino 97.8 0.00068 2.3E-08 67.4 17.3 86 150-235 52-165 (276)
358 2eeg_A PDZ and LIM domain prot 97.8 2.4E-05 8.4E-10 65.2 5.5 59 478-537 32-92 (94)
359 2kpk_A Membrane-associated gua 97.8 3.6E-05 1.2E-09 68.3 6.9 63 478-540 43-109 (129)
360 3gge_A PDZ domain-containing p 97.8 5.4E-05 1.8E-09 63.6 7.4 58 337-402 29-88 (95)
361 2awx_A Synapse associated prot 97.8 4.4E-05 1.5E-09 65.0 7.1 60 478-538 33-95 (105)
362 3mmg_A Nuclear inclusion prote 97.8 0.0012 4.1E-08 64.1 17.9 140 152-301 30-194 (241)
363 1wha_A KIAA0147 protein, scrib 97.8 2.4E-05 8.2E-10 66.7 5.4 58 478-536 38-98 (105)
364 3axa_A Afadin, nectin-3, prote 97.8 6E-05 2.1E-09 64.2 7.9 61 477-538 37-100 (106)
365 4amh_A Disks large homolog 1; 97.8 5.1E-05 1.8E-09 64.9 7.4 59 477-536 31-92 (106)
366 1vae_A Rhophilin 2, rhophilin, 97.8 1.6E-05 5.5E-10 68.8 4.2 56 480-535 38-95 (111)
367 2e7k_A Maguk P55 subfamily mem 97.8 2.9E-05 9.7E-10 64.6 5.6 56 479-535 30-87 (91)
368 1m9u_A Earthworm fibrinolytic 97.8 0.0003 1E-08 68.5 13.9 86 150-235 27-134 (241)
369 2wph_S Coagulation factor IXA 97.8 0.00037 1.3E-08 67.6 14.5 85 150-234 24-131 (235)
370 2vwr_A Ligand of NUMB protein 97.8 2.5E-05 8.4E-10 65.2 5.2 60 478-538 29-91 (95)
371 2any_A Kininogenin, plasma kal 97.8 0.00035 1.2E-08 68.1 14.3 86 150-235 27-134 (241)
372 2oq5_A Transmembrane protease, 97.8 0.00071 2.4E-08 65.5 16.3 86 150-235 24-127 (232)
373 1q3o_A Shank1; PDZ, GKAP, pept 97.7 3.8E-05 1.3E-09 65.9 6.4 57 478-535 45-103 (109)
374 1yc0_A Hepatocyte growth facto 97.7 0.00048 1.6E-08 69.0 15.5 86 150-235 58-170 (283)
375 1wf7_A Enigma homologue protei 97.7 1.9E-05 6.6E-10 67.0 4.4 59 478-537 29-89 (103)
376 3h7o_A Group 3 allergen smipp- 97.7 0.0002 7E-09 68.9 12.3 150 151-302 27-225 (228)
377 1b8q_A Protein (neuronal nitri 97.7 1.4E-05 4.7E-10 70.7 3.6 62 478-539 33-97 (127)
378 3tvj_B Mannan-binding lectin s 97.7 0.00061 2.1E-08 66.0 15.7 86 150-235 22-131 (242)
379 1v62_A KIAA1719 protein; struc 97.7 3.5E-05 1.2E-09 67.2 6.0 60 479-539 43-105 (117)
380 1nf3_C PAR-6B; semi-CRIB motif 97.7 4.7E-05 1.6E-09 67.5 6.9 59 478-537 65-126 (128)
381 2lob_A Golgi-associated PDZ an 96.9 4.1E-06 1.4E-10 72.7 0.0 34 336-369 53-88 (112)
382 2kv8_A RGS12, regulator of G-p 97.7 1.7E-05 6E-10 64.4 3.7 56 479-535 24-81 (83)
383 3f1s_B Vitamin K-dependent pro 97.7 0.00036 1.2E-08 70.0 14.3 86 150-235 77-181 (283)
384 1ufx_A KIAA1526 protein; PDZ d 97.7 8.6E-06 2.9E-10 69.5 1.8 59 337-405 33-98 (103)
385 3gyl_B Prostasin; ENAC, zymoge 97.7 0.00083 2.8E-08 66.0 16.4 86 150-235 24-131 (261)
386 1wif_A RSGI RUH-020, riken cDN 97.7 3.4E-05 1.2E-09 68.4 5.6 57 479-535 50-110 (126)
387 1uhp_A Hypothetical protein KI 97.7 9.7E-05 3.3E-09 63.1 8.3 59 477-536 40-101 (107)
388 3bg8_A Coagulation factor XIA 97.7 0.00062 2.1E-08 66.2 15.2 86 150-235 27-134 (238)
389 1x6d_A Interleukin-16; PDZ dom 97.7 3.1E-05 1.1E-09 67.5 5.2 60 478-537 42-104 (119)
390 1uit_A Human discs large 5 pro 97.7 1.9E-05 6.6E-10 68.6 3.8 61 478-538 42-103 (117)
391 2db5_A INAD-like protein; PDZ 97.7 4.2E-05 1.4E-09 67.7 6.0 58 478-536 54-115 (128)
392 1pyt_D TC, PCPA-TC, chymotryps 97.7 0.0014 5E-08 64.2 17.8 86 150-235 41-146 (251)
393 2dls_A PDZ-rhogef, RHO guanine 97.7 5.8E-05 2E-09 62.8 6.5 56 479-536 30-87 (93)
394 2iwn_A Multiple PDZ domain pro 97.7 6E-05 2E-09 62.8 6.6 59 478-537 33-94 (97)
395 1k32_A Tricorn protease; prote 97.7 0.0001 3.5E-09 87.0 11.0 66 335-412 747-824 (1045)
396 1q7x_A PDZ2B domain of PTP-BAS 97.7 3.1E-05 1E-09 66.3 4.8 59 478-537 42-103 (108)
397 2bz6_H Blood coagulation facto 97.7 0.00075 2.6E-08 66.3 15.6 85 150-234 24-133 (254)
398 1uez_A KIAA1526 protein; PDZ d 97.7 2.2E-05 7.5E-10 66.4 3.8 59 478-537 35-94 (101)
399 3k1r_A Harmonin; protein-prote 97.7 7E-05 2.4E-09 71.1 7.7 63 478-542 110-174 (192)
400 2eno_A Synaptojanin-2-binding 97.7 7E-05 2.4E-09 65.4 7.2 60 477-537 46-108 (120)
401 2qy0_B Complement C1R subcompo 97.7 0.00054 1.9E-08 66.6 14.4 85 150-235 22-135 (242)
402 1i16_A Interleukin 16, LCF; cy 97.7 4.2E-05 1.4E-09 68.0 5.7 59 478-536 57-118 (130)
403 3e17_A Tight junction protein 97.7 7.3E-05 2.5E-09 61.7 6.7 56 479-535 22-80 (88)
404 3qik_A Phosphatidylinositol 3, 97.7 6.1E-05 2.1E-09 63.9 6.3 55 479-533 40-98 (101)
405 1y8t_A Hypothetical protein RV 97.7 8.7E-05 3E-09 76.2 8.8 61 478-538 242-304 (324)
406 3b76_A E3 ubiquitin-protein li 97.7 7.1E-05 2.4E-09 65.5 7.0 57 478-535 53-112 (118)
407 2dm8_A INAD-like protein; PDZ 97.7 3.4E-05 1.2E-09 66.9 4.8 60 478-538 43-105 (116)
408 2yuy_A RHO GTPase activating p 97.7 1.1E-05 3.9E-10 71.2 1.7 59 478-537 61-121 (126)
409 4dgj_A Enteropeptidase catalyt 97.7 0.00059 2E-08 66.0 14.1 85 150-234 24-132 (235)
410 1m5z_A GRIP, AMPA receptor int 97.7 9E-05 3.1E-09 61.2 7.1 57 478-535 32-90 (91)
411 1whd_A RGS3, regulator of G-pr 97.7 2.2E-05 7.5E-10 66.4 3.3 57 479-536 37-95 (100)
412 2zgc_A Granzyme M; serine prot 97.6 0.0012 4.1E-08 64.4 16.2 86 150-235 24-127 (240)
413 1ym0_A Fibrinotic enzyme compo 97.6 0.0016 5.4E-08 63.1 17.0 86 150-235 26-131 (238)
414 1y7n_A Amyloid beta A4 precurs 97.6 7.7E-05 2.6E-09 61.9 6.4 54 481-535 34-89 (90)
415 2iwo_A Multiple PDZ domain pro 97.6 7.3E-05 2.5E-09 65.5 6.6 59 478-537 53-114 (120)
416 2g5m_B Neurabin-2; spinophilin 97.6 6.2E-05 2.1E-09 64.9 6.0 60 477-537 34-96 (113)
417 1ddj_A Plasminogen; catalytic 97.6 0.0015 5.2E-08 63.9 16.8 86 150-235 42-143 (247)
418 3qe1_A Sorting nexin-27, G pro 97.6 9.2E-05 3.1E-09 63.1 6.9 57 479-536 44-102 (107)
419 1n7t_A 99-MER peptide of densi 97.6 7.5E-05 2.6E-09 63.3 6.2 58 477-536 42-101 (103)
420 2qg1_A Multiple PDZ domain pro 97.6 7E-05 2.4E-09 62.0 5.8 59 478-537 29-90 (92)
421 1um1_A KIAA1849 protein, RSGI 97.6 9.1E-05 3.1E-09 63.5 6.7 59 478-537 36-97 (110)
422 2dkr_A LIN-7 homolog B; LIN-7B 97.6 8.4E-05 2.9E-09 61.5 6.3 58 478-536 30-90 (93)
423 2dlu_A INAD-like protein; PDZ 97.6 6.2E-05 2.1E-09 64.7 5.6 58 479-537 39-99 (111)
424 1ky9_A Protease DO, DEGP, HTRA 97.6 1.6E-05 5.6E-10 85.5 2.1 62 477-538 285-347 (448)
425 1wg6_A Hypothetical protein (r 97.6 6.2E-05 2.1E-09 66.6 5.5 60 478-537 55-123 (127)
426 1w9e_A Syntenin 1; cell adhesi 97.6 0.00013 4.4E-09 67.4 7.9 58 478-535 27-86 (166)
427 2gzv_A PRKCA-binding protein; 97.6 0.0001 3.5E-09 63.9 6.5 55 479-534 51-108 (114)
428 2edp_A Fragment, shroom family 97.6 4.2E-05 1.4E-09 64.7 3.9 58 479-537 36-95 (100)
429 1wf8_A Neurabin-I; PDZ domain, 97.6 0.0001 3.5E-09 62.9 6.3 59 477-536 39-100 (107)
430 2qkv_A Inactivation-NO-after-p 97.6 0.00011 3.7E-09 61.5 6.3 56 479-535 32-90 (96)
431 3nfk_A Tyrosine-protein phosph 97.6 0.00013 4.5E-09 62.1 7.0 58 478-535 43-107 (107)
432 1qav_A Alpha-1 syntrophin (res 97.6 0.00017 5.8E-09 59.4 7.3 56 478-534 30-88 (90)
433 3h5c_B Vitamin K-dependent pro 97.6 0.00061 2.1E-08 69.4 13.1 85 150-234 118-221 (317)
434 2z17_A Pleckstrin homology SEC 97.5 7.6E-05 2.6E-09 63.4 5.2 54 478-532 48-103 (104)
435 1rtf_B (TC)-T-PA, two chain ti 97.5 0.0037 1.3E-07 61.1 18.1 86 150-235 30-141 (252)
436 3i4w_A Disks large homolog 4; 97.5 0.00014 4.9E-09 61.5 6.7 57 479-536 36-95 (104)
437 2cs5_A Tyrosine-protein phosph 97.5 0.00011 3.7E-09 64.1 6.1 60 478-537 41-107 (119)
438 3qo6_A Protease DO-like 1, chl 97.5 4.8E-05 1.6E-09 79.1 4.5 61 478-538 251-323 (348)
439 1wfv_A Membrane associated gua 97.5 4.9E-05 1.7E-09 64.3 3.8 59 478-537 36-97 (103)
440 1uju_A Scribble; PDZ domain, c 97.5 3.5E-05 1.2E-09 66.3 2.9 59 477-536 43-104 (111)
441 3l4f_D SH3 and multiple ankyri 97.5 0.00016 5.6E-09 64.4 7.3 59 478-537 65-125 (132)
442 2olg_A Pro-phenoloxidase activ 97.5 0.0033 1.1E-07 62.5 17.7 86 150-235 51-174 (278)
443 3hpk_A Protein interacting wit 97.5 0.00014 4.8E-09 63.9 6.7 55 479-534 46-103 (125)
444 4fln_A Protease DO-like 2, chl 97.5 0.00019 6.4E-09 78.6 9.0 84 434-539 254-348 (539)
445 1fon_A Procarboxypeptidase A-S 97.5 0.00033 1.1E-08 68.2 9.8 86 150-235 26-134 (240)
446 1fiw_A Beta-acrosin heavy chai 97.5 0.0022 7.7E-08 64.5 16.2 86 150-235 30-143 (290)
447 1arb_A Achromobacter protease 97.5 0.00075 2.6E-08 67.5 12.5 58 150-207 34-122 (268)
448 1z87_A Alpha-1-syntrophin; pro 97.5 3.6E-05 1.2E-09 76.8 2.8 61 335-405 102-164 (263)
449 2edv_A FERM and PDZ domain-con 97.5 7E-05 2.4E-09 62.8 4.0 56 479-536 32-89 (96)
450 2vnt_A Urokinase-type plasmino 97.5 0.0053 1.8E-07 60.7 18.5 101 125-235 37-165 (276)
451 3rm2_H Thrombin heavy chain; s 97.5 0.0038 1.3E-07 60.9 17.3 86 150-235 26-143 (259)
452 2ehr_A INAD-like protein; PDZ 97.5 0.00022 7.7E-09 61.8 7.4 59 477-536 49-110 (117)
453 3kzd_A TIAM-1, T-lymphoma inva 97.5 0.00027 9.4E-09 59.2 7.6 53 478-533 35-89 (94)
454 3egg_C Spinophilin; PP1, serin 97.4 0.00023 7.8E-09 66.3 7.5 58 477-535 110-170 (170)
455 2daz_A INAD-like protein; PDZ 97.4 0.00013 4.6E-09 64.0 5.6 59 478-537 51-112 (124)
456 3soe_A Membrane-associated gua 97.4 0.0004 1.4E-08 60.2 8.4 56 480-537 36-94 (113)
457 2d8i_A T-cell lymphoma invasio 97.4 0.0001 3.6E-09 64.0 4.7 56 478-536 44-101 (114)
458 3num_A Serine protease HTRA1; 97.4 2E-05 6.7E-10 81.4 0.0 61 477-539 253-313 (332)
459 2la8_A Inactivation-NO-after-p 97.4 0.00015 5E-09 62.1 5.2 56 479-535 26-84 (106)
460 1z8g_A Serine protease hepsin; 97.4 0.0019 6.5E-08 67.5 14.7 86 150-235 141-253 (372)
461 2dc2_A GOPC, golgi associated 97.4 0.00032 1.1E-08 59.5 7.2 58 478-536 35-95 (103)
462 1ufx_A KIAA1526 protein; PDZ d 97.4 0.00013 4.3E-09 62.2 4.6 57 480-536 34-97 (103)
463 2f9n_A Alpha I tryptase; serin 97.4 0.0022 7.5E-08 62.5 14.2 86 150-235 27-132 (245)
464 4e34_A Golgi-associated PDZ an 97.4 0.00035 1.2E-08 57.0 7.1 56 478-534 28-86 (87)
465 1md8_A C1R complement serine p 97.4 0.0014 4.9E-08 67.3 13.2 85 150-235 111-224 (329)
466 2csj_A TJP2 protein; PDZ domai 97.4 0.00018 6.1E-09 62.5 5.3 60 478-539 46-107 (117)
467 2qbw_A PDZ-fibronectin fusion 97.4 0.00044 1.5E-08 65.2 8.4 59 477-537 23-86 (195)
468 1yph_C Chymotrypsin A, chain B 97.3 0.0017 5.7E-08 57.3 11.3 84 150-234 25-127 (131)
469 2eei_A PDZ domain-containing p 97.3 0.00015 5.1E-09 61.7 4.2 58 478-536 32-91 (106)
470 1v6b_A Harmonin isoform A1; st 97.3 0.00028 9.6E-09 61.5 5.8 57 480-536 45-107 (118)
471 1tp5_A Presynaptic density pro 97.2 0.0004 1.4E-08 60.3 5.9 58 478-536 38-98 (119)
472 3tsz_A Tight junction protein 97.2 0.00048 1.6E-08 72.7 7.5 61 478-538 31-94 (391)
473 2b9l_A Prophenoloxidase activa 97.2 0.0051 1.8E-07 64.8 15.3 86 149-235 161-271 (394)
474 1zjk_A Mannan-binding lectin s 97.2 0.004 1.4E-07 65.5 14.4 86 150-235 183-292 (403)
475 1gpz_A Complement C1R componen 97.2 0.0033 1.1E-07 66.0 13.7 95 139-234 168-291 (399)
476 2bdy_A Thrombin; thrombin, com 97.1 0.011 3.7E-07 59.2 16.5 85 150-234 56-172 (289)
477 2krg_A Na(+)/H(+) exchange reg 97.1 0.00014 4.7E-09 70.6 2.0 58 479-537 34-94 (216)
478 1um7_A Synapse-associated prot 97.1 0.00021 7E-09 61.4 2.9 58 478-536 39-99 (113)
479 4fgm_A Aminopeptidase N family 97.0 0.00054 1.8E-08 76.2 6.2 61 478-539 496-557 (597)
480 4dur_A Plasminogen, serine pro 97.0 0.0077 2.6E-07 69.0 15.7 87 149-235 585-687 (791)
481 1lvm_A Catalytic domain of the 97.0 0.038 1.3E-06 53.3 18.0 132 159-303 46-203 (229)
482 3shw_A Tight junction protein 97.0 0.001 3.6E-08 71.5 7.5 60 478-537 23-85 (468)
483 1fc6_A Photosystem II D1 prote 97.0 0.00091 3.1E-08 70.4 6.7 60 478-537 99-160 (388)
484 1r6j_A Syntenin 1; PDZ, membra 96.9 0.0014 4.8E-08 53.4 6.3 51 482-533 27-79 (82)
485 3hrz_D Complement factor B; se 96.9 0.0087 3E-07 67.8 14.8 71 149-219 483-573 (741)
486 2xxl_A GRAM-positive specific 96.9 0.021 7.2E-07 60.3 16.7 85 150-235 146-267 (408)
487 2lob_A Golgi-associated PDZ an 95.9 0.00016 5.4E-09 62.6 0.0 55 478-533 53-110 (112)
488 4f4o_C Haptoglobin; globin fol 96.9 0.012 4.2E-07 60.8 14.2 85 150-235 126-227 (347)
489 1z87_A Alpha-1-syntrophin; pro 96.8 0.0011 3.9E-08 65.9 5.5 59 478-537 103-164 (263)
490 2f83_A Coagulation factor XI; 96.7 0.0097 3.3E-07 66.5 12.9 85 150-234 414-520 (625)
491 3nxp_A Prethrombin-1; alloster 96.5 0.0083 2.8E-07 63.7 10.5 85 150-234 191-307 (424)
492 3k50_A Putative S41 protease; 96.3 0.0015 5.2E-08 69.0 2.7 56 480-537 92-147 (403)
493 2xrc_A Human complement factor 96.0 0.055 1.9E-06 59.6 13.6 85 150-234 345-455 (565)
494 3gge_A PDZ domain-containing p 95.9 0.019 6.6E-07 47.9 7.0 55 480-534 30-88 (95)
495 2hal_A Hepatitis A protease 3C 95.9 0.18 6.3E-06 48.3 14.9 80 113-207 3-93 (212)
496 3qzr_A 3C protein; chymotrypsi 95.8 0.29 9.8E-06 45.8 15.6 139 125-291 18-178 (187)
497 3suz_A Amyloid beta A4 precurs 95.8 0.0026 8.9E-08 67.0 1.6 59 479-537 233-295 (388)
498 1elv_A Complement C1S componen 95.7 0.022 7.7E-07 58.1 8.3 85 151-235 104-217 (333)
499 3zve_A 3C protease; hydrolase, 95.3 0.44 1.5E-05 44.8 15.1 128 150-291 23-174 (190)
500 3q3y_A HEVB EV93 3C protease; 95.3 0.4 1.4E-05 44.9 14.4 138 125-291 16-176 (191)
No 1
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=2.7e-76 Score=645.80 Aligned_cols=442 Identities=49% Similarity=0.872 Sum_probs=400.7
Q ss_pred HhCCCCCceEEEEeEeecCCCCCcccccCCCcceEEEEEEeCCEEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEeCCC
Q 036586 118 KAVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIGTEC 197 (568)
Q Consensus 118 ~v~p~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d~~~ 197 (568)
...+ |||+|++....+++..||+++++..+.||||||++||||||+|||.++..+.|++.+|+++|+|+|++.|+.+
T Consensus 45 ~~~~---sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~ 121 (539)
T 4fln_A 45 SFLN---AVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDC 121 (539)
T ss_dssp HHHT---TEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEETTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTT
T ss_pred ccCC---CeEEEEEEecCCCCCCccccCCccceEEEEEEEECCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCC
Confidence 3456 9999999999999999999999999999999999999999999999999999999679999999999999999
Q ss_pred CeEEEEeccCccccCccceecCCCcccCCeEEEEecCCCCCCceEEEEEEeeeecccc----------------cCC--C
Q 036586 198 DIALLTVKDDEFWEGVSPVEFGDLPALQDAVTVVGYPIGGDTISVTSGVVSRMEILSY----------------VHG--S 259 (568)
Q Consensus 198 DlAlLkv~~~~~~~~l~~~~l~~~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~~----------------~~g--g 259 (568)
||||||++...++..++++.++++.++|++|++||||+|++..++|.|+||++++..+ ++| |
T Consensus 122 DLAvLkv~~~~~~~~~~pl~~g~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~~~~~~~~IQtDAaInpGnSG 201 (539)
T 4fln_A 122 DIALLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSG 201 (539)
T ss_dssp TEEEEEECCSSSSTTCCCCCBCCCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTTSCCEEEEEEESSCCCTTTTT
T ss_pred CEEEEEEeCCcCCcCCceeecCCcCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccCCCCcceeEEEEEeEecCCCcc
Confidence 9999999987665677889999999999999999999998766999999999865421 244 4
Q ss_pred ceeecccceEEEEEeeeecCCCCccccccccchhhhHhHHHhhhcCccccCceeeEEEEEcCCHHHHHhcCCCCCCCceE
Q 036586 260 TELLGLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYEKNGAYTGFPILGVEWQKMENPDLRISMGMRPGQKGVR 339 (568)
Q Consensus 260 spL~n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~ 339 (568)
|||+|.+|+||||+++++...+..+++||||++.+++++++|+++|++.+|+|||+.++.+.++.+++.+|++. ..|++
T Consensus 202 GPLvn~~GeVIGIntai~~~~~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~~-~~Gv~ 280 (539)
T 4fln_A 202 GPAFNDQGECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPT-NEGVL 280 (539)
T ss_dssp SEEECSSSCEEEEECCCC-----CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHHTCSS-SBCEE
T ss_pred chhccCCCcEEEEEEEEecCCCCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhcCCCC-cCcee
Confidence 59999999999999998866677899999999999999999999999877999999999987899999999987 68999
Q ss_pred EEEecCCCcccCCCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEeccCCCc
Q 036586 340 IRRIEPTAPESHVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHKRL 419 (568)
Q Consensus 340 V~~V~p~spA~~GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~~~~~~ 419 (568)
|.+|.++|||+++|++||+|++|||++|.+.+++.++..+++.|..++..+.+|++++|+|+|+|++++++|+|..++.+
T Consensus 281 V~~V~~~spA~~al~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl~~~~~~ 360 (539)
T 4fln_A 281 VRRVEPTSDASKVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPRVHL 360 (539)
T ss_dssp EEEECTTSGGGGTCCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCCCCS
T ss_pred eecccCCChHHhCccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEEccCccc
Confidence 99999999998899999999999999999999888777788888999999999999999999999999999999999988
Q ss_pred cccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEeccccccccccccC
Q 036586 420 IPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVN 499 (568)
Q Consensus 420 ~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~g 499 (568)
.+.+.....|+|++++||+|++++.+++. +++. ...++++++...+.+.....+++|+|++|++++.+.+|+++.|
T Consensus 361 ~~~~~~~~~p~~~~~~Gl~f~~Lt~~~~~-~~~~---~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~g 436 (539)
T 4fln_A 361 VPYHIDGGQPSYIIVAGLVFTPLSEPLIE-EECE---DTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNN 436 (539)
T ss_dssp SCSCTTSSCCCCCCSTTEEEEECCHHHHT-TSCS---SSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCS
T ss_pred cccccccCCCccccccceEEeeCCHHHHH-hhcc---cccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCC
Confidence 88888888999999999999999977666 4442 2446677777777666777888999999999999999999999
Q ss_pred cEEEeeCCEecCCHHHHHHHHHccCCCeEEEEEEcCeEEEEeccchHhHhHhHHHhcCCCCCCCCCCC
Q 036586 500 TQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIVVLKSKTAKEATSDILATHCIPSAMSGDLK 567 (568)
Q Consensus 500 d~I~~VNg~pV~~l~~f~~~l~~~~~~~v~l~v~R~~~~~l~~~~~~~~~~~i~~~~~i~~~~~~~~~ 567 (568)
|+|++|||++|.|++||.++|+++++++++|++.++..++|+++++++++++|+++|+||++||+||.
T Consensus 437 diI~~vNg~~V~s~~~l~~~l~~~k~~~l~~~~~~~~~ivL~~~~~~~~~~~Il~~~~I~~~~S~dl~ 504 (539)
T 4fln_A 437 QQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDYGIPSERSADLL 504 (539)
T ss_dssp EEEEEETTEECCSHHHHHHHHHTCCSSEEEEEETTSCEEEEEHHHHHHHHHHHHTTTTCSCSSCGGGG
T ss_pred CEEEeECCEEcCCHHHHHHHHHHcCCCeEEEEECCCEEEEEEHHHHHHhHHHHHHhcCCCcccCcchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999985
No 2
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=1.3e-54 Score=468.64 Aligned_cols=378 Identities=20% Similarity=0.309 Sum_probs=312.5
Q ss_pred CCCcHHHHHHHhCCCCCceEEEEeEeecCC-----------C--CCcccccCCCcceEEEEEEe-C-CEEEEcccccCCC
Q 036586 108 LPPRWESVAVKAVPSMDAVVKVFCVHTEPN-----------F--SLPWQRKRQYSSSSSGFIVG-G-RRVLTNAHSVEHH 172 (568)
Q Consensus 108 ~~~~~~~~~~~v~p~~~sVV~I~~~~~~~~-----------~--~~p~~~~~~~~~~GSGfiI~-~-G~ILTn~HVV~~~ 172 (568)
...+|+++++++.| |||.|.+...... + ..||..+....+.||||||+ + ||||||+|||.++
T Consensus 11 ~~~~~~~~~~~~~p---aVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a 87 (436)
T 4a8c_A 11 PLPSLAPMLEKVLP---AVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQA 87 (436)
T ss_pred CCCCHHHHHHhhCC---cEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCC
Confidence 34689999999999 9999998765321 1 12333334456899999998 5 9999999999999
Q ss_pred CeEEEEEcCCCcEEEEEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEEEEecCCCCCCceEEEEEEeee
Q 036586 173 TQVKVKKRGSDTKYLATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVTVVGYPIGGDTISVTSGVVSRM 250 (568)
Q Consensus 173 ~~i~V~~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~aiG~P~g~~~~svt~GiIs~~ 250 (568)
..+.|++ .+++.++|++++.|+.+||||||++... .+++++|+++. .+|++|+++|||+|+.. +++.|+|+++
T Consensus 88 ~~i~V~~-~dg~~~~a~vv~~d~~~DlAllkv~~~~---~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~-~vt~G~vs~~ 162 (436)
T 4a8c_A 88 QKISIQL-NDGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSAL 162 (436)
T ss_pred CEEEEEe-CCCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEEcCCCCCc-cEEEEEEeee
Confidence 9999999 5999999999999999999999997653 78999999754 66899999999999876 9999999988
Q ss_pred eccc-----c----------cC--CCceeecccceEEEEEeeeecCC-CCccccccccchhhhHhHHHhhhcCccccCce
Q 036586 251 EILS-----Y----------VH--GSTELLGLQGKCVGIAFQSLKND-DVENIGYVIPTPVIIHFIQDYEKNGAYTGFPI 312 (568)
Q Consensus 251 ~~~~-----~----------~~--ggspL~n~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~ 312 (568)
++.. + .+ +||||+|.+|+||||+++.+... +..+++||||++.+++++++|+++|++. |+|
T Consensus 163 ~r~~~~~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-r~~ 241 (436)
T 4a8c_A 163 GRSGLNLEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGL 241 (436)
T ss_pred cccccCCCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccc-ccc
Confidence 6541 1 13 45699999999999999987654 4578999999999999999999999998 999
Q ss_pred eeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccC
Q 036586 313 LGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKY 391 (568)
Q Consensus 313 lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~ 391 (568)
||+.++.+ ++++++.||++. ..|++|..|.++|||++ ||++||+|++|||++|.++.+ +..++....
T Consensus 242 lGv~~~~~-~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~----------l~~~l~~~~ 309 (436)
T 4a8c_A 242 LGIKGTEM-SADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAE----------LRSRIATTE 309 (436)
T ss_pred CceEeccc-CHHHHHHhCCCC-CcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHH----------HHHHHHhcC
Confidence 99999999 999999999987 67999999999999999 999999999999999999988 567777767
Q ss_pred CCCEEEEEEEECCEEEEEEEEeccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhh
Q 036586 392 TGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAM 471 (568)
Q Consensus 392 ~g~~v~l~V~R~g~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~ 471 (568)
+|+++.|+|+|+|+.+++++++..++...... . ....|+....+... .
T Consensus 310 ~g~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~------~-~~~~gl~~~~~~~~------~------------------- 357 (436)
T 4a8c_A 310 PGTKVKLGLLRNGKPLEVEVTLDTSTSSSASA------E-MITPALEGATLSDG------Q------------------- 357 (436)
T ss_pred CCCEEEEEEEECCEEEEEEEEECCCCcccccc------c-ccccCceeeecccc------c-------------------
Confidence 89999999999999999999998775421110 0 01233333332210 0
Q ss_pred hccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHccCCCeEEEEEEcCeEEEE
Q 036586 472 AQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIVVL 540 (568)
Q Consensus 472 ~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~~~~~v~l~v~R~~~~~l 540 (568)
..+...+++|..|.+++++..+|++.||+|++|||++|.+|++|.++|++.+ +.+.|++.|+++.+.
T Consensus 358 -~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~l~~~~-~~v~l~v~R~g~~~~ 424 (436)
T 4a8c_A 358 -LKDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKP-AIIALQIVRGNESIY 424 (436)
T ss_pred -ccCCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhCC-CeEEEEEEECCEEEE
Confidence 0012357999999999888778888999999999999999999999999854 589999999987544
No 3
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=1.8e-54 Score=468.93 Aligned_cols=382 Identities=20% Similarity=0.270 Sum_probs=307.8
Q ss_pred CCcHHHHHHHhCCCCCceEEEEeEeecCC--------CCCccc-------------ccCCCcceEEEEEEe-C-CEEEEc
Q 036586 109 PPRWESVAVKAVPSMDAVVKVFCVHTEPN--------FSLPWQ-------------RKRQYSSSSSGFIVG-G-RRVLTN 165 (568)
Q Consensus 109 ~~~~~~~~~~v~p~~~sVV~I~~~~~~~~--------~~~p~~-------------~~~~~~~~GSGfiI~-~-G~ILTn 165 (568)
..+|+++++++.| |||.|.+...... ..+||+ ..+...+.||||||+ + ||||||
T Consensus 18 ~~~~~~~~~~~~p---avv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn 94 (451)
T 3pv2_A 18 MPSMAPVLKNIMP---AIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITN 94 (451)
T ss_dssp CCCSHHHHHHHGG---GEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEEC
T ss_pred CCCHHHHHHHhCC---cEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEC
Confidence 4689999999999 9999998764221 111211 112345789999998 4 999999
Q ss_pred ccccCCCCeEEEEEcCCCcEEEEEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEEEEecCCCCC----C
Q 036586 166 AHSVEHHTQVKVKKRGSDTKYLATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVTVVGYPIGGD----T 239 (568)
Q Consensus 166 ~HVV~~~~~i~V~~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~aiG~P~g~~----~ 239 (568)
+|||.++..+.|++ .+++.++|++++.|+.+|||||+++.. .++++.|+++. .+|++|+++|||+|+. .
T Consensus 95 ~HVv~~a~~i~V~~-~dg~~~~a~vv~~d~~~DlAlLkv~~~----~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~ 169 (451)
T 3pv2_A 95 DHVIRNASLITVTL-QDGRRLKARLIGGDSETDLAVLKIDAK----NLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNS 169 (451)
T ss_dssp HHHHTTEEEEEEEC-TTSCEEECEEEEEETTTTEEEEECCCS----SCCCCCBCCGGGCCTTCEEEEEECCCCC-----C
T ss_pred hHHhCCCCEEEEEE-cCCCEEEEEEEecCcCCcEEEEEEcCc----CCceeEecCcccCCCCCEEEEEECCCCccccccC
Confidence 99999999999999 599999999999999999999999864 78999999765 5689999999999976 1
Q ss_pred ceEEEEEEeeeecccc---------------cC--CCceeecccceEEEEEeeeecCC-CCccccccccchhhhHhHHHh
Q 036586 240 ISVTSGVVSRMEILSY---------------VH--GSTELLGLQGKCVGIAFQSLKND-DVENIGYVIPTPVIIHFIQDY 301 (568)
Q Consensus 240 ~svt~GiIs~~~~~~~---------------~~--ggspL~n~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l 301 (568)
.+++.|+|+++.+..+ .+ +||||+|.+|+||||+++.+... +..+++||||++.+++++++|
T Consensus 170 ~~vt~Givs~~~r~~~~~~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l 249 (451)
T 3pv2_A 170 QSATFGIVSALKRSDLNIEGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQI 249 (451)
T ss_dssp CEEEEEEEEEEC----------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHH
T ss_pred CceeEEEEeeccccccCCCCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHH
Confidence 3899999999865411 12 56699999999999999977644 457899999999999999999
Q ss_pred hhcCccccCceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCcc
Q 036586 302 EKNGAYTGFPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGER 380 (568)
Q Consensus 302 ~~~g~~~~~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~ 380 (568)
+++|++. |+|||+.++.+ ++++++.||++....|++|..|.++|||++ ||++||+|++|||++|.++.+
T Consensus 250 ~~~g~v~-r~~lGv~~~~~-~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~-------- 319 (451)
T 3pv2_A 250 IKFGSIH-RGLMGIFVQHL-TPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQ-------- 319 (451)
T ss_dssp HHHSSCC-CCBCCEEEEEC-CHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH--------
T ss_pred HhcCCcc-cccccceEEec-cHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHH--------
Confidence 9999998 99999999999 999999999997448999999999999999 999999999999999999987
Q ss_pred chHHHHHhccCCCCEEEEEEEECCEEEEEEEEeccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCch
Q 036586 381 IGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAP 460 (568)
Q Consensus 381 ~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p 460 (568)
|..++.....|+++.|+|+|+|+.+++++++...+......... ...+.|+.|.++.+. .. .
T Consensus 320 --l~~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~~~~~~----~~~~~G~~l~~~~~~-~~---~-------- 381 (451)
T 3pv2_A 320 --VKTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQSN----NPFLYGLALRAFEQE-SP---P-------- 381 (451)
T ss_dssp --HHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCHHHHHHHHHHH----STTTTTEEEEEEEEE-CT---T--------
T ss_pred --HHHHHHhcCCCCEEEEEEEECCEEEEEEEEEccCCccccccccc----cccccccccccCChh-Hh---c--------
Confidence 66778777889999999999999999999988764211000000 011457766665421 00 0
Q ss_pred hhhHHHHHhhhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHccCCCeEEEEEEcCeEEEE
Q 036586 461 VKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIVVL 540 (568)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~~~~~v~l~v~R~~~~~l 540 (568)
.....|++|..|.++++++.+|++.||+|++|||++|.++++|.++|++ +++.+.|.+.|+++.++
T Consensus 382 -------------~~~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~~~l~~-~~~~v~l~v~R~g~~~~ 447 (451)
T 3pv2_A 382 -------------HGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQE-KKKELLVQVLRGPGSMY 447 (451)
T ss_dssp -------------SCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHTTS-SCSCEEEEEEETTEEEE
T ss_pred -------------ccCCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHhc-CCCeEEEEEEECCEEEE
Confidence 0123579999999998888788889999999999999999999999998 56789999999987543
No 4
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=8.9e-52 Score=447.43 Aligned_cols=372 Identities=22% Similarity=0.362 Sum_probs=239.9
Q ss_pred CcHHHHHHHhCCCCCceEEEEeEeecC------------CCCC--------------cccc----------cCCCcceEE
Q 036586 110 PRWESVAVKAVPSMDAVVKVFCVHTEP------------NFSL--------------PWQR----------KRQYSSSSS 153 (568)
Q Consensus 110 ~~~~~~~~~v~p~~~sVV~I~~~~~~~------------~~~~--------------p~~~----------~~~~~~~GS 153 (568)
.+|+++++++.| |||.|.+..... +++. ||.. .....+.||
T Consensus 13 ~~~~~~~~~~~p---avV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GS 89 (448)
T 1ky9_A 13 PSLAPMLEKVMP---SVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGS 89 (448)
T ss_dssp CCSHHHHHHHGG---GEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEE
T ss_pred ccHHHHHHHhCC---cEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEE
Confidence 479999999999 999998865421 0000 1100 011236799
Q ss_pred EEEEe-C-CEEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEE
Q 036586 154 GFIVG-G-RRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVT 229 (568)
Q Consensus 154 GfiI~-~-G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~ 229 (568)
||||+ + ||||||+|||.++..+.|++ .+++.++|++++.|+.+|||||+++... .+++++|+++. ++|++|+
T Consensus 90 G~ii~~~~g~IlTn~HVv~~a~~i~V~~-~dg~~~~a~vv~~d~~~DlAvlkv~~~~---~~~~~~l~~s~~~~~G~~V~ 165 (448)
T 1ky9_A 90 GVIIDADKGYVVTNNHVVDNATVIKVQL-SDGRKFDAKMVGKDPRSDIALIQIQNPK---NLTAIKMADSDALRVGDYTV 165 (448)
T ss_dssp EEEEETTTTEEEEEHHHHTTEEEEEEEE-TTSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTCEEE
T ss_pred EEEEECCCCEEEEChHHhCCCCEEEEEE-CCCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEEecccccCCCCCEEE
Confidence 99998 5 99999999999999999999 5999999999999999999999998642 78999999865 5689999
Q ss_pred EEecCCCCCCceEEEEEEeeeeccc-----c----------cCC--CceeecccceEEEEEeeeecCC-CCccccccccc
Q 036586 230 VVGYPIGGDTISVTSGVVSRMEILS-----Y----------VHG--STELLGLQGKCVGIAFQSLKND-DVENIGYVIPT 291 (568)
Q Consensus 230 aiG~P~g~~~~svt~GiIs~~~~~~-----~----------~~g--gspL~n~~G~VVGI~~~~~~~~-~~~~~~~aIP~ 291 (568)
++|||+|+.. +++.|+||++.+.. + .+| ||||+|.+|+||||+++.+... +..+++||||+
T Consensus 166 aiG~P~g~~~-tvt~Givs~~~r~~~~~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~ 244 (448)
T 1ky9_A 166 AIGNPFGLGE-TVTSGIVSALGRSGLNAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPS 244 (448)
T ss_dssp EEECTTSSSC-EEEEEEEEEESSCC-----CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEEEH
T ss_pred EEECCCCCCC-eEEeEEEeeccccccCCCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeeeec
Confidence 9999999876 99999999986531 1 134 4599999999999999977543 45789999999
Q ss_pred hhhhHhHHHhhhcCccccCceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC
Q 036586 292 PVIIHFIQDYEKNGAYTGFPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND 370 (568)
Q Consensus 292 ~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~ 370 (568)
+.+++++++|+++|++. |+|||+.++.+ ++++++.||++. ..|++|..|.++|||++ ||++||+|++|||++|.++
T Consensus 245 ~~~~~~~~~l~~~g~v~-~~~LGv~~~~~-~~~~a~~lgl~~-~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~ 321 (448)
T 1ky9_A 245 NMVKNLTSQMVEYGQVK-RGELGIMGTEL-NSELAKAMKVDA-QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSF 321 (448)
T ss_dssp HHHHHHHHHHHHHSSCC-BCCCCCSCCCT-TSHHHHTSCCTT-CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSS
T ss_pred ccchhhHHHHhhhcccc-eeccccccccc-cHHHHHHhCCCC-CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCH
Confidence 99999999999999998 99999999999 899999999987 67999999999999999 9999999999999999999
Q ss_pred CCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEeccCCCccccccCCCCCCceeeecEEEeeCChHHHHHH
Q 036586 371 GTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSE 450 (568)
Q Consensus 371 ~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~ 450 (568)
.+ |..++.....|+++.|+|+|+|+.+++++++...+..... . ......+.|+.+.++.
T Consensus 322 ~~----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~~~---~-~~~~~~~~G~~l~~~~------- 380 (448)
T 1ky9_A 322 AA----------LRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVD---S-SSIFNGIEGAEMSNKG------- 380 (448)
T ss_dssp HH----------HHHHTTSSBTTCCCEEEEESSSCEEECCCC--------------------------------------
T ss_pred HH----------HHHHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCcccc---c-ccccccccceEeeccC-------
Confidence 87 5667766668999999999999988888777543221000 0 0001112354433221
Q ss_pred hCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHccCCCeEEE
Q 036586 451 YGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKF 530 (568)
Q Consensus 451 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~~~~~v~l 530 (568)
...+++|..|.+++++..++++.||+|++|||++|.++++|.++|++.++ .+.|
T Consensus 381 -------------------------~~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~~~l~~~~~-~v~l 434 (448)
T 1ky9_A 381 -------------------------KDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSKPS-VLAL 434 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------CCCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHcCCC-eEEE
Confidence 12458899999998888888889999999999999999999999998765 8999
Q ss_pred EEEcCeEEE
Q 036586 531 DLEYQQIVV 539 (568)
Q Consensus 531 ~v~R~~~~~ 539 (568)
.+.|+++.+
T Consensus 435 ~v~R~g~~~ 443 (448)
T 1ky9_A 435 NIQRGDSTI 443 (448)
T ss_dssp ---------
T ss_pred EEEECCEEE
Confidence 999988643
No 5
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=7.7e-47 Score=395.91 Aligned_cols=289 Identities=24% Similarity=0.387 Sum_probs=248.2
Q ss_pred CCcHHHHHHHhCCCCCceEEEEeEeecCC-----------CC--CcccccCCCcceEEEEEEe-C-CEEEEcccccCCCC
Q 036586 109 PPRWESVAVKAVPSMDAVVKVFCVHTEPN-----------FS--LPWQRKRQYSSSSSGFIVG-G-RRVLTNAHSVEHHT 173 (568)
Q Consensus 109 ~~~~~~~~~~v~p~~~sVV~I~~~~~~~~-----------~~--~p~~~~~~~~~~GSGfiI~-~-G~ILTn~HVV~~~~ 173 (568)
..+|+++++++.| |||.|.+...... ++ .||..+....+.||||||+ + ||||||+|||.++.
T Consensus 12 ~~~~~~~~~~~~p---aVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~ 88 (345)
T 3stj_A 12 LPSLAPMLEKVLP---AVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQ 88 (345)
T ss_dssp CCBSHHHHHHHGG---GEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEE
T ss_pred CCCHHHHHHHhCC---cEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCC
Confidence 3689999999999 9999998765321 11 1333334456889999998 5 99999999999999
Q ss_pred eEEEEEcCCCcEEEEEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEEEEecCCCCCCceEEEEEEeeee
Q 036586 174 QVKVKKRGSDTKYLATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVTVVGYPIGGDTISVTSGVVSRME 251 (568)
Q Consensus 174 ~i~V~~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~aiG~P~g~~~~svt~GiIs~~~ 251 (568)
.+.|++ .+++.++|++++.|+.+|||||+++... .++++.|+++. ..|++|+++|||+++.. +++.|+|+++.
T Consensus 89 ~i~V~~-~dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~-~vt~G~Vs~~~ 163 (345)
T 3stj_A 89 KISIQL-NDGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSALG 163 (345)
T ss_dssp EEEEEC-TTSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGCSC-EEEEEEEEEEE
T ss_pred EEEEEe-CCCcEEEEEEEEEcCCCCEEEEEEcccC---CCceEeecCcccCCCCCEEEEEECCCCCCC-cEEeeEEeeec
Confidence 999999 5999999999999999999999997653 78999999865 56799999999999876 99999999876
Q ss_pred cccc---------------cC--CCceeecccceEEEEEeeeecCC-CCccccccccchhhhHhHHHhhhcCccccCcee
Q 036586 252 ILSY---------------VH--GSTELLGLQGKCVGIAFQSLKND-DVENIGYVIPTPVIIHFIQDYEKNGAYTGFPIL 313 (568)
Q Consensus 252 ~~~~---------------~~--ggspL~n~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~l 313 (568)
+..+ .+ +||||+|.+|+||||+++.+... +..+++||||++.+++++++|+++|++. |+||
T Consensus 164 ~~~~~~~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-~~~l 242 (345)
T 3stj_A 164 RSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLL 242 (345)
T ss_dssp ECCSSSSSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEEC
T ss_pred ccccCCCCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhccccc-cccc
Confidence 5411 13 45699999999999999987654 4578999999999999999999999998 9999
Q ss_pred eEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCC
Q 036586 314 GVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYT 392 (568)
Q Consensus 314 Gi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~ 392 (568)
|+.++.+ ++++++.||++. ..|++|.+|.++|||++ ||++||+|++|||++|.++.+ |..++....+
T Consensus 243 Gv~~~~~-~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~----------l~~~l~~~~~ 310 (345)
T 3stj_A 243 GIKGTEM-SADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAE----------LRSRIATTEP 310 (345)
T ss_dssp CEEEEEC-CHHHHHHTTCSC-CSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHH----------HHHHHHTSCT
T ss_pred ceeeEee-cHHHHHhcCCCC-CceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHH----------HHHHHHhcCC
Confidence 9999999 999999999987 78999999999999999 999999999999999999888 6778887789
Q ss_pred CCEEEEEEEECCEEEEEEEEeccCCC
Q 036586 393 GDSAVVKVLRNSEVHEFNIKLSTHKR 418 (568)
Q Consensus 393 g~~v~l~V~R~g~~~~v~v~l~~~~~ 418 (568)
|++++|+|+|+|+.+++++++..++.
T Consensus 311 g~~v~l~v~R~g~~~~~~v~l~~~~~ 336 (345)
T 3stj_A 311 GTKVKLGLLRNGKPLEVEVTLDTSTS 336 (345)
T ss_dssp TCEEEEEEEETTEEEEEEEECEEC--
T ss_pred CCEEEEEEEECCEEEEEEEEEcccCC
Confidence 99999999999999999999987765
No 6
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=2.1e-43 Score=366.27 Aligned_cols=285 Identities=20% Similarity=0.343 Sum_probs=245.1
Q ss_pred CCCcHHHHHHHhCCCCCceEEEEeEeecCCCCCcccccCCCcceEEEEEEe-CCEEEEcccccCCCCeEEEEEcCCCcEE
Q 036586 108 LPPRWESVAVKAVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVG-GRRVLTNAHSVEHHTQVKVKKRGSDTKY 186 (568)
Q Consensus 108 ~~~~~~~~~~~v~p~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~G~ILTn~HVV~~~~~i~V~~~~dg~~~ 186 (568)
.+.+++++++++.| |||+|.+...... |.......+.||||+|+ +||||||+|||.++..+.|.+ .+++.+
T Consensus 7 ~~~~~~~~~~~~~~---sVV~I~~~~~~~~----~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~-~~g~~~ 78 (318)
T 1te0_A 7 TPASYNLAVRRAAP---AVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVAL-QDGRVF 78 (318)
T ss_dssp CCCCCHHHHHHHGG---GEEEEEEEEECSS----SSCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEEC-TTSCEE
T ss_pred ccccHHHHHHhcCC---cEEEEEeEeccCC----cccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEe-CCCCEE
Confidence 34678899999999 9999999875432 22222345789999999 789999999999999999999 599999
Q ss_pred EEEEEEEeCCCCeEEEEeccCccccCccceecCCC--cccCCeEEEEecCCCCCCceEEEEEEeeeecccc---------
Q 036586 187 LATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDL--PALQDAVTVVGYPIGGDTISVTSGVVSRMEILSY--------- 255 (568)
Q Consensus 187 ~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~--~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~~--------- 255 (568)
+|+++++|+.+|||||+++... .++++.|+++ ...|++|+++|||+|... +++.|+|+...+..+
T Consensus 79 ~a~v~~~d~~~DlAllk~~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~i 154 (318)
T 1te0_A 79 EALLVGSDSLTDLAVLIIKATG---GLPTIPINARRVPHIGDVVLAIGNPYNLGQ-TITQGIISATGRIGLNPTGRQNFL 154 (318)
T ss_dssp EEEEEEEETTTTEEEEECCCSS---CCCCCCCCTTCCCCTTCEEEEECCCSSSSC-CEEEEEEEECCCCCCCTTCSCCSE
T ss_pred EEEEEEeCCCceEEEEEEeCCC---CCceEEeeCccCCCCCCEEEEEEcCCCCCC-cEEeeEEecccccccCCCCcCCEE
Confidence 9999999999999999998762 6899999874 467899999999999765 899999998754311
Q ss_pred ------cC--CCceeecccceEEEEEeeeecCC----CCccccccccchhhhHhHHHhhhcCccccCceeeEEEEEcCCH
Q 036586 256 ------VH--GSTELLGLQGKCVGIAFQSLKND----DVENIGYVIPTPVIIHFIQDYEKNGAYTGFPILGVEWQKMENP 323 (568)
Q Consensus 256 ------~~--ggspL~n~~G~VVGI~~~~~~~~----~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~ 323 (568)
.+ +||||+|.+|+||||+++.+... +..+++||||++.+++++++|+++|++. ++|||+.++.+ ++
T Consensus 155 ~~d~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~-~~~lGi~~~~~-~~ 232 (318)
T 1te0_A 155 QTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI-RGYIGIGGREI-AP 232 (318)
T ss_dssp EESSCCCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCEEEEEC-SC
T ss_pred EECCCCCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcc-cccceeEeeec-ch
Confidence 12 45699999999999999876532 3568999999999999999999999998 99999999999 88
Q ss_pred HHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEE
Q 036586 324 DLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLR 402 (568)
Q Consensus 324 ~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R 402 (568)
.+++.||++. ..|++|..|.++|||++ ||++||+|++|||++|.++.+ |..++....+|+.+.|+|+|
T Consensus 233 ~~~~~~g~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~----------l~~~l~~~~~g~~v~l~v~R 301 (318)
T 1te0_A 233 LHAQGGGIDQ-LQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALE----------TMDQVAEIRPGSVIPVVVMR 301 (318)
T ss_dssp CCSSSSCSSS-CCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHH----------HHHHHHTSCTTCEEEEEEES
T ss_pred hHHHhccCCC-CCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHH----------HHHHHHhcCCCCEEEEEEEE
Confidence 8999999976 67999999999999999 999999999999999999877 66778776789999999999
Q ss_pred CCEEEEEEEEeccCC
Q 036586 403 NSEVHEFNIKLSTHK 417 (568)
Q Consensus 403 ~g~~~~v~v~l~~~~ 417 (568)
+|+.+++++++...+
T Consensus 302 ~g~~~~~~v~~~~~~ 316 (318)
T 1te0_A 302 DDKQLTLQVTIQEYP 316 (318)
T ss_dssp SSCEEEEEEECEECC
T ss_pred CCEEEEEEEEEccCC
Confidence 999999999886543
No 7
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=2.7e-41 Score=354.56 Aligned_cols=285 Identities=22% Similarity=0.338 Sum_probs=237.9
Q ss_pred CCCcHHHHHHHhCCCCCceEEEEeEeecCCCCCcccccCCCcceEEEEEEe-CCEEEEcccccCCCCeEEEEEcCCCcEE
Q 036586 108 LPPRWESVAVKAVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVG-GRRVLTNAHSVEHHTQVKVKKRGSDTKY 186 (568)
Q Consensus 108 ~~~~~~~~~~~v~p~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~G~ILTn~HVV~~~~~i~V~~~~dg~~~ 186 (568)
.+.+..++++++.| |||.|............+. .....+.||||||+ +|+||||+|||.++..+.|.+ .+++.+
T Consensus 15 ~e~~~~~~~~~~~~---sVV~I~~~~~~~~~~~~~~-~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~-~~g~~~ 89 (348)
T 3qo6_A 15 DELATVRLFQENTP---SVVYITNLAVRQDAFTLDV-LEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTL-ADQTTF 89 (348)
T ss_dssp HHHHHHHHHHHHGG---GEEEEEEEEEEECSSSCCE-EEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEEC-TTSCEE
T ss_pred chhHHHHHHHHhCC---CEEEEEEEeeccccccccc-ccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEE-CCCCEE
Confidence 34677789999999 9999998765332211111 11224689999999 789999999999999999999 699999
Q ss_pred EEEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEEEEecCCCCCCceEEEEEEeeeeccc----------
Q 036586 187 LATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVTVVGYPIGGDTISVTSGVVSRMEILS---------- 254 (568)
Q Consensus 187 ~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~---------- 254 (568)
+|++++.|+.+|||||+++... ..+++++|+++. ..|+.|+++|||++... +++.|+|+.+.+..
T Consensus 90 ~a~~v~~d~~~DlAlLkl~~~~--~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~ 166 (348)
T 3qo6_A 90 DAKVVGFDQDKDVAVLRIDAPK--NKLRPIPVGVSADLLVGQKVFAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQ 166 (348)
T ss_dssp EEEEEEEEGGGTEEEEECCCCG--GGCCCCCBCCSTTCCTTCEEEEEECGGGCTT-EEEEEEEEEEEEEECCSSSSSCEE
T ss_pred EEEEEEEcCcCCEEEEEEcCCC--CCceeEEecCcccCCCCCEEEEEECCCCCCC-cEeEEEEEeeccccccccCCCccc
Confidence 9999999999999999998752 368899998754 56899999999999776 89999999875421
Q ss_pred --------ccC--CCceeecccceEEEEEeeeecCC-CCccccccccchhhhHhHHHhhhcCccccCceeeEEEEEcCCH
Q 036586 255 --------YVH--GSTELLGLQGKCVGIAFQSLKND-DVENIGYVIPTPVIIHFIQDYEKNGAYTGFPILGVEWQKMENP 323 (568)
Q Consensus 255 --------~~~--ggspL~n~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~ 323 (568)
..+ +||||+|.+|+||||+++.+... ...+++||||++.+++++++|+++|++. |||||+.+...
T Consensus 167 ~~i~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~-~~~lGi~~~~~--- 242 (348)
T 3qo6_A 167 DVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVT-RPILGIKFAPD--- 242 (348)
T ss_dssp EEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCCEECCT---
T ss_pred CEEEEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCcee-eeecCcEEccc---
Confidence 012 55699999999999999987654 3578999999999999999999999999 99999998654
Q ss_pred HHHHhcCCCCCCCceEEEEecCCCcccC-CCCC-----------CCEEEEECCEEcCCCCCCccccCccchHHHHHhccC
Q 036586 324 DLRISMGMRPGQKGVRIRRIEPTAPESH-VLKP-----------SDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKY 391 (568)
Q Consensus 324 ~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~-----------GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~ 391 (568)
..++.+|+ .|++|.+|.++|||++ ||++ ||+|++|||++|.++.+ |..++....
T Consensus 243 ~~~~~~~~----~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~d----------l~~~l~~~~ 308 (348)
T 3qo6_A 243 QSVEQLGV----SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSD----------LYRILDQCK 308 (348)
T ss_dssp TTTTTTTC----SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHH----------HHHHHTTCC
T ss_pred hhhhhcCC----ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHH----------HHHHHHhCC
Confidence 23455554 5999999999999999 9999 99999999999999988 677887777
Q ss_pred CCCEEEEEEEECCEEEEEEEEeccCCC
Q 036586 392 TGDSAVVKVLRNSEVHEFNIKLSTHKR 418 (568)
Q Consensus 392 ~g~~v~l~V~R~g~~~~v~v~l~~~~~ 418 (568)
+|++++|+|+|+|+.+++++++..++.
T Consensus 309 ~g~~v~l~v~R~g~~~~~~v~l~~~~~ 335 (348)
T 3qo6_A 309 VGDEVTVEVLRGDHKEKISVTLEPKPD 335 (348)
T ss_dssp TTCEEEEEEECSSSEEEEEEECEECC-
T ss_pred CcCEEEEEEEECCEEEEEEEEEccCCC
Confidence 899999999999999999999987654
No 8
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=1.3e-40 Score=346.19 Aligned_cols=274 Identities=24% Similarity=0.362 Sum_probs=225.7
Q ss_pred CCcHHHHHHHhCCCCCceEEEEeEeecCCCCCcccccCCCcceEEEEEEe-CCEEEEcccccCCCCeEEEEEcCCCcEEE
Q 036586 109 PPRWESVAVKAVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVG-GRRVLTNAHSVEHHTQVKVKKRGSDTKYL 187 (568)
Q Consensus 109 ~~~~~~~~~~v~p~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~G~ILTn~HVV~~~~~i~V~~~~dg~~~~ 187 (568)
...++++++++.| |||+|.+.... +|.......+.||||+|+ +||||||+|||.++..+.|++ .+++.++
T Consensus 14 ~~~~~~~~~~~~~---sVV~I~~~~~~-----~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~-~~g~~~~ 84 (325)
T 1lcy_A 14 YNFIADVVEKTAP---AVVYIEILDRH-----PFLGREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRL-LSGDTYE 84 (325)
T ss_dssp SCHHHHHHHHHGG---GEEEEEEEEEE-----TTTTEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEEC-TTSCEEE
T ss_pred hhHHHHHHHHhCC---cEEEEEEEecC-----ccCCCccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEe-CCCCEEE
Confidence 4678999999999 99999886542 232222234789999999 789999999999999999999 5999999
Q ss_pred EEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEEEEecCCCCCCceEEEEEEeeeeccc-----------
Q 036586 188 ATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVTVVGYPIGGDTISVTSGVVSRMEILS----------- 254 (568)
Q Consensus 188 a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~----------- 254 (568)
|+++++|+.+|||||+++... .+++++|+++. ..|++|+++|||++... +++.|+|+...+..
T Consensus 85 a~v~~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~-~v~~G~vs~~~~~~~~~g~~~~~~~ 160 (325)
T 1lcy_A 85 AVVTAVDPVADIATLRIQTKE---PLPTLPLGRSADVRQGEFVVAMGSPFALQN-TITSGIVSSAQRPARDLGLPQTNVE 160 (325)
T ss_dssp EEEEEEETTTTEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEECCCTTSSSS-CCEEEEBCSCSCC---------CCC
T ss_pred EEEEEECCCCCEEEEEEcCCC---CCceEEecccccCCCCCEEEEEECCCCCCC-cEEeEEEecccccccccCCCCCCCC
Confidence 999999999999999998753 68999999754 56899999999999775 89999999875420
Q ss_pred -------ccC--CCceeecccceEEEEEeeeecCCCCccccccccchhhhHhHHHhhhc------CccccCceeeEEEEE
Q 036586 255 -------YVH--GSTELLGLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYEKN------GAYTGFPILGVEWQK 319 (568)
Q Consensus 255 -------~~~--ggspL~n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~------g~~~~~~~lGi~~~~ 319 (568)
..+ +||||+|.+|+||||+++... .+++||||++.++++|+++++. +.+. ++|+|+.+..
T Consensus 161 ~i~~d~~~~~G~SGGPl~~~~G~vVGI~s~~~~----~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~-r~~lGv~~~~ 235 (325)
T 1lcy_A 161 YIQTDAAIDFGNAGGPLVNLDGEVIGVNTMKVT----AGISFAIPSDRLREFLHRGEKKNSSSGISGSQ-RRYIGVMMLT 235 (325)
T ss_dssp CEEESSCCSTTTTTSEEEETTSCEEEEEEEEEE----TTEEEEEEHHHHHHHTCC----------------EECCEEEEE
T ss_pred EEEEcCCCCCCCccccEECCCCEEEEEEeEeec----CCeeEEEEHHHHHHHHHHhhhccccccccccc-ccccceEeec
Confidence 012 456999999999999998653 4789999999999999998764 3566 8999999999
Q ss_pred cCCHHHHHhcCCCC-----CCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCC
Q 036586 320 MENPDLRISMGMRP-----GQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTG 393 (568)
Q Consensus 320 ~~~~~~~~~lgl~~-----~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g 393 (568)
+ ++.+++.++++. ...|++|.+|.++|||++ ||++||+|++|||++|.++.+ |..++.. +
T Consensus 236 l-~~~~~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~----------l~~~l~~---~ 301 (325)
T 1lcy_A 236 L-SPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAED----------VYEAVRT---Q 301 (325)
T ss_dssp C-CHHHHHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH----------HHHHHTT---C
T ss_pred C-CHHHHHhhCccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHH----------HHHHHhC---C
Confidence 9 999999999863 247999999999999999 999999999999999999877 5556543 6
Q ss_pred CEEEEEEEECCEEEEEEEEec
Q 036586 394 DSAVVKVLRNSEVHEFNIKLS 414 (568)
Q Consensus 394 ~~v~l~V~R~g~~~~v~v~l~ 414 (568)
+++.|+|.|+|+.+++++++.
T Consensus 302 ~~v~l~v~R~g~~~~~~v~~~ 322 (325)
T 1lcy_A 302 SQLAVQIRRGRETLTLYVTPE 322 (325)
T ss_dssp SSEEEEEEETTEEEEEEECCE
T ss_pred CeEEEEEEECCEEEEEEEEEe
Confidence 899999999999988888754
No 9
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=2.2e-39 Score=336.83 Aligned_cols=266 Identities=20% Similarity=0.303 Sum_probs=224.9
Q ss_pred CCcHHHHHHHhCCCCCceEEEEeEeecCCCCCcccccCCCcceEEEEEEe-CCEEEEcccccCCCC---------eEEEE
Q 036586 109 PPRWESVAVKAVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVG-GRRVLTNAHSVEHHT---------QVKVK 178 (568)
Q Consensus 109 ~~~~~~~~~~v~p~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~G~ILTn~HVV~~~~---------~i~V~ 178 (568)
+.+++++++++.| |||+|.+... ...+.||||+|+ +||||||+|||.+.. .+.|.
T Consensus 5 ~~~~~~~~~~~~~---svV~I~~~~~------------~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~ 69 (324)
T 1y8t_A 5 PGSVEQVAAKVVP---SVVMLETDLG------------RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVT 69 (324)
T ss_dssp -CCHHHHHHHHGG---GEEEEEEEC----------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEE
T ss_pred cccHHHHHHHhcC---cEEEEEEEcc------------CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEE
Confidence 4679999999999 9999987643 123689999999 599999999998765 89999
Q ss_pred EcCCCcEEEEEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEEEEecCCCCCCceEEEEEEeeeeccc--
Q 036586 179 KRGSDTKYLATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVTVVGYPIGGDTISVTSGVVSRMEILS-- 254 (568)
Q Consensus 179 ~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~-- 254 (568)
+ .+++.++|+++++|+..|||||+++... .++++.|+++. ..|++|+++|||+|... +++.|+|+...+..
T Consensus 70 ~-~~g~~~~a~vv~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~G~vs~~~~~~~~ 144 (324)
T 1y8t_A 70 F-SDGRTAPFTVVGADPTSDIAVVRVQGVS---GLTPISLGSSSDLRVGQPVLAIGSPLGLEG-TVTTGIVSALNRPVST 144 (324)
T ss_dssp E-TTCCEECEEEEECCTTTTEEEEEECSCC---SCCCCEECCSTTCCTTCEEEEEECGGGCTT-EEEEEEEEEEEEEECC
T ss_pred e-CCCCEEEEEEEEeCCCCCEEEEEECCCC---CCceEEecCcccCCCCCEEEEEEcCCCCCC-cEeeeEEeeccccccc
Confidence 9 5999999999999999999999999752 78999998753 67899999999999765 89999998764310
Q ss_pred -------------------ccC--CCceeecccceEEEEEeeeecCC--------CCccccccccchhhhHhHHHhhhcC
Q 036586 255 -------------------YVH--GSTELLGLQGKCVGIAFQSLKND--------DVENIGYVIPTPVIIHFIQDYEKNG 305 (568)
Q Consensus 255 -------------------~~~--ggspL~n~~G~VVGI~~~~~~~~--------~~~~~~~aIP~~~i~~~l~~l~~~g 305 (568)
..+ +||||+|.+|+||||+++..... +..+++||||++.+++++++|+++|
T Consensus 145 ~~~~g~~~~~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g 224 (324)
T 1y8t_A 145 TGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTG 224 (324)
T ss_dssp -------CCCEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHS
T ss_pred ccccCcccccCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcC
Confidence 012 45699999999999999876432 2468999999999999999999999
Q ss_pred ccccCceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHH
Q 036586 306 AYTGFPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFS 384 (568)
Q Consensus 306 ~~~~~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~ 384 (568)
++. ++|||+.+... . ...|++|..|.++|||++ |||+||+|++|||++|.++.+ |.
T Consensus 225 ~~~-~~~lGi~~~~~-~-----------~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~----------l~ 281 (324)
T 1y8t_A 225 KAS-HASLGVQVTND-K-----------DTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADA----------LV 281 (324)
T ss_dssp CCC-CEECCEEEESC-S-----------SSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHH----------HH
T ss_pred Ccc-ccccceEeeec-c-----------CCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHH----------HH
Confidence 998 99999998754 1 146899999999999999 999999999999999999887 66
Q ss_pred HHHhccCCCCEEEEEEEE-CCEEEEEEEEeccCC
Q 036586 385 YLVSQKYTGDSAVVKVLR-NSEVHEFNIKLSTHK 417 (568)
Q Consensus 385 ~~l~~~~~g~~v~l~V~R-~g~~~~v~v~l~~~~ 417 (568)
.++....+|++++|+|+| +|+.+++++++...+
T Consensus 282 ~~l~~~~~g~~v~l~v~R~~g~~~~~~v~~~~~~ 315 (324)
T 1y8t_A 282 AAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAE 315 (324)
T ss_dssp HHHHTSCTTCEEEEEEECSSCCEEEEEEECEEC-
T ss_pred HHHHhcCCCCEEEEEEEECCCCEEEEEEEEccCC
Confidence 777766789999999999 999999999887654
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=6e-40 Score=342.26 Aligned_cols=278 Identities=22% Similarity=0.331 Sum_probs=144.6
Q ss_pred CCCcHHHHHHHhCCCCCceEEEEeEeecCCCCCcccccCCCcceEEEEEEe-CCEEEEcccccCCCCeEEEEEcCCCcEE
Q 036586 108 LPPRWESVAVKAVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVG-GRRVLTNAHSVEHHTQVKVKKRGSDTKY 186 (568)
Q Consensus 108 ~~~~~~~~~~~v~p~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~G~ILTn~HVV~~~~~i~V~~~~dg~~~ 186 (568)
....++++++++.| |||+|.+....+ |.......+.||||||+ +|+||||+|||.+...+.|.+ .++..+
T Consensus 12 ~~~~~~~~~~~~~~---sVV~I~~~~~~~-----~~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~-~~g~~~ 82 (332)
T 3num_A 12 KYNFIADVVEKIAP---AVVHIELFRKLP-----FSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVEL-KNGATY 82 (332)
T ss_dssp HHCHHHHHHHHHGG---GEEEEEEEEECT-----TSSCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEE-TTSCEE
T ss_pred ccchHHHHHHHhcC---cEEEEEEEeccc-----cCCCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEE-CCCCEE
Confidence 34778999999999 999999977543 33223445789999999 789999999999999999999 599999
Q ss_pred EEEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEEEEecCCCCCCceEEEEEEeeeeccc----------
Q 036586 187 LATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVTVVGYPIGGDTISVTSGVVSRMEILS---------- 254 (568)
Q Consensus 187 ~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~---------- 254 (568)
+|++++.|+.+|||||+++... .++++.|+++. ..|+.|+++|||++... +++.|+|+...+..
T Consensus 83 ~a~~~~~d~~~DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~ 158 (332)
T 3num_A 83 EAKIKDVDEKADIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQN-TVTTGIVSTTQRGGKELGLRNSDM 158 (332)
T ss_dssp EEEEEEEETTTTEEEEEECCSS---CCCCCCBCCTTSCCTTCEEEEECC-----C-CEEEEEEEEC--------------
T ss_pred EEEEEEecCCCCeEEEEEcCCC---CCceeeecCcccCCCCCEEEEEECCCCCCc-ceeeeEEEeecccccccCcCCCcC
Confidence 9999999999999999999763 68889998654 56899999999999776 89999998764321
Q ss_pred --------ccC--CCceeecccceEEEEEeeeecCCCCccccccccchhhhHhHHHhhh---c--CccccCceeeEEEEE
Q 036586 255 --------YVH--GSTELLGLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYEK---N--GAYTGFPILGVEWQK 319 (568)
Q Consensus 255 --------~~~--ggspL~n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~---~--g~~~~~~~lGi~~~~ 319 (568)
..+ +||||+|.+|+||||+++... .+++||||++.++++|+++.+ . +.+. ++|||+.+..
T Consensus 159 ~~i~~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~----~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~-r~~lGi~~~~ 233 (332)
T 3num_A 159 DYIQTDAIINYGNAGGPLVNLDGEVIGINTLKVT----AGISFAIPSDKIKKFLTESHDRQAKGKAITK-KKYIGIRMMS 233 (332)
T ss_dssp CCEEESSCCCTTTTTSEEEETTSCEEEEEEEEEE----TTEEEEEEHHHHHHHHHHHCC---------------------
T ss_pred CEEEEECCcCCCCcHHHhhCCCCcEEEEEeeEec----ccceEEECHHHHHHHHHHHhhhhccCccccc-ccccceEEEe
Confidence 112 556999999999999998663 579999999999999999753 2 2345 8999999998
Q ss_pred cCCHHHHHhcC-----CCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCC
Q 036586 320 MENPDLRISMG-----MRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTG 393 (568)
Q Consensus 320 ~~~~~~~~~lg-----l~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g 393 (568)
+ ++..++.++ ++....|++|..|.++|||++ ||++||+|++|||++|.++.++ ..++. .|
T Consensus 234 ~-~~~~~~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~----------~~~l~---~~ 299 (332)
T 3num_A 234 L-TSSKAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDV----------SDVIK---RE 299 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred c-CHHHhhhhhhhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHH----------HHHHh---CC
Confidence 8 776666554 333357999999999999999 9999999999999999999883 34443 37
Q ss_pred CEEEEEEEECCEEEEEEEEeccCC
Q 036586 394 DSAVVKVLRNSEVHEFNIKLSTHK 417 (568)
Q Consensus 394 ~~v~l~V~R~g~~~~v~v~l~~~~ 417 (568)
+.++|+|.|+|+.+++++++..+.
T Consensus 300 ~~v~l~v~R~g~~~~~~v~p~~~~ 323 (332)
T 3num_A 300 STLNMVVRRGNEDIMITVIPEEID 323 (332)
T ss_dssp ------------------------
T ss_pred CeEEEEEEECCEEEEEEEEEeeec
Confidence 889999999999988888876553
No 11
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=99.97 E-value=3.5e-30 Score=257.07 Aligned_cols=195 Identities=26% Similarity=0.388 Sum_probs=144.4
Q ss_pred CCcHHHHHHHhCCCCCceEEEEeEeecCC-----------C--CCcccccCCCcceEEEEEEe-C-CEEEEcccccCCCC
Q 036586 109 PPRWESVAVKAVPSMDAVVKVFCVHTEPN-----------F--SLPWQRKRQYSSSSSGFIVG-G-RRVLTNAHSVEHHT 173 (568)
Q Consensus 109 ~~~~~~~~~~v~p~~~sVV~I~~~~~~~~-----------~--~~p~~~~~~~~~~GSGfiI~-~-G~ILTn~HVV~~~~ 173 (568)
..+|+++++++.| |||.|.+...... + ..||.......+.||||||+ + |+||||+|||.++.
T Consensus 12 ~~~~~~~~~~~~p---aVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~ 88 (245)
T 3sti_A 12 LPSLAPMLEKVLP---AVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQ 88 (245)
T ss_dssp CCBSHHHHHHHGG---GEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----
T ss_pred CCCHHHHHHHhCC---ceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCC
Confidence 3689999999999 9999988764321 1 11333233456889999999 5 89999999999999
Q ss_pred eEEEEEcCCCcEEEEEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEEEEecCCCCCCceEEEEEEeeee
Q 036586 174 QVKVKKRGSDTKYLATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVTVVGYPIGGDTISVTSGVVSRME 251 (568)
Q Consensus 174 ~i~V~~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~aiG~P~g~~~~svt~GiIs~~~ 251 (568)
.+.|.+ .+++.++|++++.|+.+||||||++... .++++.|+++. ..|++|+++|||+|... +++.|+|+.+.
T Consensus 89 ~i~V~~-~dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~-~vt~G~vs~~~ 163 (245)
T 3sti_A 89 KISIQL-NDGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSALG 163 (245)
T ss_dssp CEEEEC-TTSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGSCC-EEEEEEEEECS
T ss_pred EEEEEE-CCCCEEEEEEEEecCCCCEEEEEeccCC---CCceeeecCcCCCCCCCEEEEEECCCCCCC-cEEeeEEeeec
Confidence 999999 5999999999999999999999997653 78999999754 56899999999999876 89999999875
Q ss_pred cccc---------------cC--CCceeecccceEEEEEeeeecCC-CCccccccccchhhhHhHHHhhhcCccccCce
Q 036586 252 ILSY---------------VH--GSTELLGLQGKCVGIAFQSLKND-DVENIGYVIPTPVIIHFIQDYEKNGAYTGFPI 312 (568)
Q Consensus 252 ~~~~---------------~~--ggspL~n~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~ 312 (568)
+..+ .+ +||||+|.+|+||||+++.+... +..+++||||++.+++++++|++.|++. ++|
T Consensus 164 ~~~~~~~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~-~~~ 241 (245)
T 3sti_A 164 RSGLNLEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIL-EHH 241 (245)
T ss_dssp SCSSCCTTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC----
T ss_pred ccccCCCCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCC-Ccc
Confidence 5411 12 45699999999999999977643 4578999999999999999999999887 555
No 12
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=99.96 E-value=1.6e-29 Score=251.57 Aligned_cols=199 Identities=27% Similarity=0.377 Sum_probs=151.7
Q ss_pred CCcHHHHHHHhCCCCCceEEEEeEeecCCCC-----Ccccc---------cCCC-cceEEEEEEe-CCEEEEcccccCCC
Q 036586 109 PPRWESVAVKAVPSMDAVVKVFCVHTEPNFS-----LPWQR---------KRQY-SSSSSGFIVG-GRRVLTNAHSVEHH 172 (568)
Q Consensus 109 ~~~~~~~~~~v~p~~~sVV~I~~~~~~~~~~-----~p~~~---------~~~~-~~~GSGfiI~-~G~ILTn~HVV~~~ 172 (568)
..++.++++++.| |||.|.+........ .||.+ .... .+.||||||+ +||||||+|||.++
T Consensus 3 ~~~~~~~~~~~~p---sVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~ 79 (239)
T 1l1j_A 3 ESPIVNVVEACAP---AVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGA 79 (239)
T ss_dssp SCHHHHHHHHHGG---GEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSC
T ss_pred chhHHHHHHHhCC---CEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCC
Confidence 3578999999999 999999876532110 22211 0112 5779999999 68999999999999
Q ss_pred CeEEEEEcCCCcEEEEEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEEEEecCCCCCCceEEEEEEeee
Q 036586 173 TQVKVKKRGSDTKYLATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVTVVGYPIGGDTISVTSGVVSRM 250 (568)
Q Consensus 173 ~~i~V~~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~aiG~P~g~~~~svt~GiIs~~ 250 (568)
..+.|.+ .+++.++|+++++|+.+||||||++... ..++++.|+++. ..|++|+++|||+++.. +++.|+|+.+
T Consensus 80 ~~i~V~~-~~g~~~~a~vv~~d~~~DlAllkl~~~~--~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~-~vt~Givs~~ 155 (239)
T 1l1j_A 80 DNITVTM-LDGSKYDAEYIGGDEELDIAVIKIKASD--KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQH-TVTVGVVSAT 155 (239)
T ss_dssp SSCEEEC-TTSCEEEBCCCEEETTTTEEEEEBCCSS--SCCCCCEECCGGGCCTTCEEEEEECTTSSSC-EEEEEEEEEE
T ss_pred CEEEEEE-CCCCEEEEEEEEEcCCCCEEEEEEcCCC--CCCceEEecCccCCccccEEEEEECCCCCCC-cEEEEEEecc
Confidence 9999999 5999999999999999999999998752 278999999764 56899999999999776 8999999986
Q ss_pred ecc----c----c----------cC--CCceeecccceEEEEEeeeecCCCCccccccccchhhhHhHHHhhhcCccccC
Q 036586 251 EIL----S----Y----------VH--GSTELLGLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYEKNGAYTGF 310 (568)
Q Consensus 251 ~~~----~----~----------~~--ggspL~n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~ 310 (568)
.+. . + .+ +||||+|.+|+||||+++.+...+..+++||||++.+++++++|+++|++. |
T Consensus 156 ~r~~~~~~~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~v~-r 234 (239)
T 1l1j_A 156 NRRIPKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILTQKKVE-K 234 (239)
T ss_dssp EEEEECTTSSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC-------
T ss_pred ccccccCCCccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHHHCCCCc-c
Confidence 432 1 1 13 456999999999999998765223468999999999999999999999999 9
Q ss_pred ceeeE
Q 036586 311 PILGV 315 (568)
Q Consensus 311 ~~lGi 315 (568)
+|||+
T Consensus 235 ~~lGv 239 (239)
T 1l1j_A 235 AYLGV 239 (239)
T ss_dssp -----
T ss_pred ceeCc
Confidence 99996
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=99.96 E-value=8.9e-28 Score=238.60 Aligned_cols=193 Identities=21% Similarity=0.345 Sum_probs=158.9
Q ss_pred CCCcHHHHHHHhCCCCCceEEEEeEeecCCCCCcccccCCCcceEEEEEEe-CCEEEEcccccCCCCeEEEEEcCCCcEE
Q 036586 108 LPPRWESVAVKAVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVG-GRRVLTNAHSVEHHTQVKVKKRGSDTKY 186 (568)
Q Consensus 108 ~~~~~~~~~~~v~p~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~G~ILTn~HVV~~~~~i~V~~~~dg~~~ 186 (568)
...+++++++++.| |||+|........+ .......+.||||||+ +|+||||+|||.+...+.|.+ .+++.+
T Consensus 18 ~~~~~~~~~~~~~~---sVV~I~~~~~~~~~----~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~-~~g~~~ 89 (237)
T 3lgi_A 18 TPASYNLAVRRAAP---AVVNVYNRGLNTNS----HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVAL-QDGRVF 89 (237)
T ss_dssp CCCBCHHHHHHHGG---GEEEEEEECCTTTC----TTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEEC-TTSCEE
T ss_pred CCcCHHHHHHHhCC---cEEEEEEEecccCc----ccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEe-CCCCEE
Confidence 34678899999999 99999998754422 2223455789999999 789999999999999999999 599999
Q ss_pred EEEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEEEEecCCCCCCceEEEEEEeeeecccc---------
Q 036586 187 LATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVTVVGYPIGGDTISVTSGVVSRMEILSY--------- 255 (568)
Q Consensus 187 ~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~~--------- 255 (568)
++++++.|+.+|||||+++... .+++++|+++. ..|+.|+++|||++... +++.|+|+.+.+..+
T Consensus 90 ~a~vv~~d~~~DlAll~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~-~~~~g~vs~~~~~~~~~~~~~~~i 165 (237)
T 3lgi_A 90 EALLVGSDSLTDLAVLKINATG---GLPTIPINARRVPHIGDVVLAIGNPYNLGQ-TITQGIISATGRIGLNPTGRQNFL 165 (237)
T ss_dssp EEEEEEEETTTTEEEEECCCSS---CCCCCCCCTTCCCCTTBEEEEEECGGGSCS-EEEEEEEEEECCSSCCTTSCSCCE
T ss_pred EEEEEEEcCCCCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEECCCCCCC-cEEEEEEEecccccccCCCcCCEE
Confidence 9999999999999999999763 58899998643 66899999999999776 899999997654311
Q ss_pred ------cC--CCceeecccceEEEEEeeeecCC----CCccccccccchhhhHhHHHhhhcCccccCcee
Q 036586 256 ------VH--GSTELLGLQGKCVGIAFQSLKND----DVENIGYVIPTPVIIHFIQDYEKNGAYTGFPIL 313 (568)
Q Consensus 256 ------~~--ggspL~n~~G~VVGI~~~~~~~~----~~~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~l 313 (568)
.+ +||||+|.+|+||||+++.+... ...+++||||++.+++++++|+++|++. ++|.
T Consensus 166 ~~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~-~~~~ 234 (237)
T 3lgi_A 166 QTDASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI-RHHH 234 (237)
T ss_dssp EECSCCCTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCC-C---
T ss_pred EEcCccCCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCC-Cchh
Confidence 12 56699999999999999877543 3567999999999999999999999987 5554
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=99.94 E-value=2.4e-26 Score=227.55 Aligned_cols=179 Identities=26% Similarity=0.398 Sum_probs=148.7
Q ss_pred CCCcHHHHHHHhCCCCCceEEEEeEeecCCCCCcccccCCCcceEEEEEEe-CCEEEEcccccCCCCeEEEEEcCCCcEE
Q 036586 108 LPPRWESVAVKAVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVG-GRRVLTNAHSVEHHTQVKVKKRGSDTKY 186 (568)
Q Consensus 108 ~~~~~~~~~~~v~p~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~G~ILTn~HVV~~~~~i~V~~~~dg~~~ 186 (568)
....++++++++.| |||+|......+ |.......+.||||||+ +|+||||+|||.+...+.|.+ .+++.+
T Consensus 29 ~~~~~~~~~~~~~~---sVV~I~~~~~~~-----~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~-~~g~~~ 99 (231)
T 3tjo_A 29 KYNFIADVVEKIAP---AVVHIELFRKLP-----FSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVEL-KNGATY 99 (231)
T ss_dssp HSCHHHHHHHHHGG---GEEEEEEEEECT-----TSSCEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEEC-TTSCEE
T ss_pred hhhHHHHHHHHhcC---cEEEEEEEeccc-----cCCCccccceEEEEEEeCCCEEEEchhcccCCceEEEEc-CCCCEE
Confidence 45788999999999 999999877532 32222334789999999 689999999999999999999 699999
Q ss_pred EEEEEEEeCCCCeEEEEeccCccccCccceecCCCc--ccCCeEEEEecCCCCCCceEEEEEEeeeeccc----------
Q 036586 187 LATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLP--ALQDAVTVVGYPIGGDTISVTSGVVSRMEILS---------- 254 (568)
Q Consensus 187 ~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~--~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~---------- 254 (568)
.+++++.|+..|||||+++... .++++.|+++. ..|+.|+++|||+++.. +++.|+|+...+..
T Consensus 100 ~a~v~~~d~~~DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~ 175 (231)
T 3tjo_A 100 EAKIKDVDEKADIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQN-TVTTGIVSTTQRGGKELGLRNSDM 175 (231)
T ss_dssp EEEEEEEETTTTEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEEEEEEETTEE-EEEEEEEEECC-------------
T ss_pred EEEEEEecCCCCEEEEEecCCC---CCCceecCCcCCCCCCCEEEEEECCCCCCC-ceeeEEEeeccccccccccCCCcc
Confidence 9999999999999999999653 68899998754 56899999999999765 88999999865421
Q ss_pred --------cc--CCCceeecccceEEEEEeeeecCCCCccccccccchhhhHhHHHhhh
Q 036586 255 --------YV--HGSTELLGLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYEK 303 (568)
Q Consensus 255 --------~~--~ggspL~n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 303 (568)
.. .+||||+|.+|+||||+++... .+++||||++.++++|+++++
T Consensus 176 ~~i~~da~i~~G~SGGPLv~~~G~vVGI~s~~~~----~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 176 DYIQTDAIINYGNAGGPLVNLDGEVIGINTLKVT----AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp CCEEESSCCCTTTTTSEEECTTSCEEEEEEEEEE----TTEEEEEEHHHHHHHHHHHHT
T ss_pred cEEEEcCCcCCCCchhHeecCCCeEEEEEeEEec----CCeEEEEEHHHHHHHHHHHhh
Confidence 11 2456999999999999998653 579999999999999999864
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.91 E-value=1.6e-23 Score=207.74 Aligned_cols=174 Identities=25% Similarity=0.363 Sum_probs=141.0
Q ss_pred HHHHHHhCCCCCceEEEEeEeecCCCCCcccccCCCcceEEEEEEeCCEEEEcccccCCCCeEEEEEcCCCcEEEEEEEE
Q 036586 113 ESVAVKAVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLS 192 (568)
Q Consensus 113 ~~~~~~v~p~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~ 192 (568)
+++++++.+ |||+|....... ...+.||||+|++||||||+|||.+...+.|.+. + ..+.+++++
T Consensus 34 ~~~~~~~~~---svV~I~~~~~~~----------~~~~~GsG~iI~~~~VlTaaH~v~~~~~~~V~~~-~-~~~~~~~v~ 98 (237)
T 3k6y_A 34 NPVVAATEP---SVVKIRSLAPRC----------QKVLEGTGFVISPDRVMTNAHVVAGSNNVTVYAG-D-KPFEATVVS 98 (237)
T ss_dssp CHHHHHHGG---GEEEEEEEEGGG----------TEEEEEEEEEEETTEEEECGGGTTTCSEEEEEET-T-EEEECEEEE
T ss_pred HHHHHHhcC---CEEEEEEEecCC----------CcceeEEEEEEECCEEEECHHHcCCCceEEEEEC-C-cEEEEEEEE
Confidence 568999999 999999876321 3346899999999999999999999999999994 5 589999999
Q ss_pred EeCCCCeEEEEeccCccccCccceecCC-CcccCCeEEEEecCCCCCCceEEEEEEeeeec----c--------------
Q 036586 193 IGTECDIALLTVKDDEFWEGVSPVEFGD-LPALQDAVTVVGYPIGGDTISVTSGVVSRMEI----L-------------- 253 (568)
Q Consensus 193 ~d~~~DlAlLkv~~~~~~~~l~~~~l~~-~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~----~-------------- 253 (568)
+|+.+||||||++.. .++++.|+. ....|+.|+++|||.+... +++.|+++.... .
T Consensus 99 ~~~~~DiAll~l~~~----~~~~~~l~~~~~~~G~~v~v~G~p~g~~~-~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 173 (237)
T 3k6y_A 99 YDPSVDVAILAVPHL----PPPPLVFAAEPAKTGADVVVLGYPGGGNF-TATPARIREAIRLSGPDIYGDPEPVTRDVYT 173 (237)
T ss_dssp EETTTTEEEEECTTC----CSCCCCBCSSCCCTTCEEEEEECGGGCSC-EEEEEEEEEEEEEEECCTTCCSSCEEEEEEE
T ss_pred EcCCCCEEEEEeCCC----CCCceecCCCCCCCCCEEEEEECCCCCCC-ccceeEEEeeEeecccccccCCCcccccEEE
Confidence 999999999999954 688899973 3467899999999998765 777787765311 0
Q ss_pred ---ccc--CCCceeecccceEEEEEeeeecCCCCccccccccchhhhHhHHHhhhcCccc
Q 036586 254 ---SYV--HGSTELLGLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYEKNGAYT 308 (568)
Q Consensus 254 ---~~~--~ggspL~n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~~g~~~ 308 (568)
... .+||||+|.+|+||||+++... +..+++||||++.++++|+++.....+.
T Consensus 174 ~~~~~~~GdSGGPLv~~~G~vvGI~s~~~~--~~~~~~~aip~~~v~~~l~~~~~~~~v~ 231 (237)
T 3k6y_A 174 IRADVEQGDSGGPLIDLNGQVLGVVFGAAI--DDAETGFVLTAGEVAGQLAKIGATQPVG 231 (237)
T ss_dssp EESCCCTTCTTCEEECTTSCEEEEEEEECS--SSTTEEEEEEHHHHHGGGGGTTCCSCCC
T ss_pred ecCccCCCccHHHEECCCCEEEEEEEeecc--CCCcEEEEEEHHHHHHHHHHccCCCCCC
Confidence 011 3566999999999999998653 4567999999999999999996555543
No 16
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.82 E-value=1.4e-19 Score=169.19 Aligned_cols=132 Identities=23% Similarity=0.273 Sum_probs=98.5
Q ss_pred cceEEEEEEeCCEEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEeCCCCeEEEEeccCccccCccceecCCCcccCCeE
Q 036586 149 SSSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLPALQDAV 228 (568)
Q Consensus 149 ~~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~~~g~~V 228 (568)
.+.||||+| +|+||||+|||.++..+.|++ +++.++|+++ .|+..||||||++... ..+++++|+++..+ ++|
T Consensus 20 ~~~GSGfii-~g~IlTn~HVV~~~~~i~V~~--dg~~~~a~vv-~d~~~DlAlLkv~~~~--~~~~~l~l~~~~~~-~~v 92 (163)
T 2w5e_A 20 EGKGTGFFS-GNDIVTAAHVVGNNTFVNVCY--EGLMYEAKVR-YMPEKDIAFITCPGDL--HPTARLKLSKNPDY-SCV 92 (163)
T ss_dssp TEEEEEEEE-TTEEEEEHHHHTTCSEEEEEE--TTEEEEEEEE-ECCSSSEEEEECCTTC--CCSCCCCBCSSCCT-TEE
T ss_pred ceeEEEEEE-CCEEEecHHHhCCCceEEEEE--CCEEEEEEEE-EECCCCEEEEEecCCC--CCcceEEcCCCCCC-CEE
Confidence 478999999 999999999999999999998 8999999999 9999999999999753 24566778877655 899
Q ss_pred EEEecCCCCCCceEEEEEEeeee---cccccCC--CceeecccceEEEEEeeeecCCCCccccccccc
Q 036586 229 TVVGYPIGGDTISVTSGVVSRME---ILSYVHG--STELLGLQGKCVGIAFQSLKNDDVENIGYVIPT 291 (568)
Q Consensus 229 ~aiG~P~g~~~~svt~GiIs~~~---~~~~~~g--gspL~n~~G~VVGI~~~~~~~~~~~~~~~aIP~ 291 (568)
+++|+|.+.-..+.+.+.+..-. .....+| ||||+|.+|+||||+++.. +..+ +|+|..
T Consensus 93 ~~~G~p~~~~~~s~~~~~~~g~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~---g~~g-g~ai~~ 156 (163)
T 2w5e_A 93 TVMAYVNEDLVVSTAAAMVYGNTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNT---GYTG-GAVIID 156 (163)
T ss_dssp EEEEEETTEEEEEEEEEEEETTEEEEECSCSSCCTTCEEECTTSCEEEEEEEEE---TTEE-EEEECC
T ss_pred EEEEeCCCCEEEEEeccEEcCCeEEEEEEeCCCCchhhEEcCCCEEEEEEccCc---cccc-CEEEec
Confidence 99999987311122333332111 0122344 4599999999999998754 3344 666543
No 17
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.81 E-value=6e-20 Score=166.36 Aligned_cols=123 Identities=25% Similarity=0.419 Sum_probs=110.4
Q ss_pred ccccccccchhhhHhHHHhhhcCccccCceeeEEEEEcCCH---HHHHhcCCCCC-CCceEEEEecCCCcccCCCCCCCE
Q 036586 283 ENIGYVIPTPVIIHFIQDYEKNGAYTGFPILGVEWQKMENP---DLRISMGMRPG-QKGVRIRRIEPTAPESHVLKPSDI 358 (568)
Q Consensus 283 ~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~---~~~~~lgl~~~-~~Gv~V~~V~p~spA~~GL~~GDi 358 (568)
++++||||++.+++++++|+++|++. ++|||+.++.+ ++ .+++.||++.. ..|++|..|.++|||+.||++||+
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~-r~~LGv~~~~~-~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~aGL~~GD~ 79 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVT-RPALGIQMVNL-SNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDV 79 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSS-CCCCCCEEEES-SSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGGTTSCSSCE
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEe-eeEeeEEEEEC-CchhHHHHHHcCCCcCCCCCEEEEEECCCCchHHCCCCCCE
Confidence 57999999999999999999999999 99999999998 54 78889999842 579999999999999889999999
Q ss_pred EEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEeccCC
Q 036586 359 ILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTHK 417 (568)
Q Consensus 359 Il~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~~~~ 417 (568)
|++|||++|.++.+ |..++....+|+.++|+|.|+|+.+++++++...|
T Consensus 80 I~~inG~~v~~~~~----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 128 (134)
T 2l97_A 80 ITKVDDKEIASSTD----------LQSALYNHSIGDTIKITYYRNGKEETTSIKLNKLE 128 (134)
T ss_dssp EEEETTEECCCHHH----------HHHHHHHSSTTCEEEEEEEETTEEEEEEEECCCC-
T ss_pred EEEECCEEcCCHHH----------HHHHHHhCCCCCEEEEEEEECCEEEEEEEEEcccC
Confidence 99999999999877 66777776689999999999999999999987654
No 18
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.76 E-value=1.9e-18 Score=167.97 Aligned_cols=174 Identities=20% Similarity=0.387 Sum_probs=129.1
Q ss_pred CceEEEEeEeecCCCCCcccccCCCcceEEEEEEeCCEEEEcccccCCCC---eEEEEE---cCCCcEEEE-EEEEEeCC
Q 036586 124 DAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVGGRRVLTNAHSVEHHT---QVKVKK---RGSDTKYLA-TVLSIGTE 196 (568)
Q Consensus 124 ~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~G~ILTn~HVV~~~~---~i~V~~---~~dg~~~~a-~vv~~d~~ 196 (568)
+++|+|.... ..||.-.. ....|+||+|++++||||+||+.+.. .+.|.+ ..++..+.+ +++.+|+.
T Consensus 3 ~~~~~i~~~~-----~~P~~v~~-~~~~c~G~lI~~~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~~ 76 (210)
T 2as9_A 3 KNVTQVKDTN-----NFPYNGVV-SFKDATGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGD 76 (210)
T ss_dssp CCEEECSCTT-----STTGGGEE-ECSSCEEEEEETTEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSSS
T ss_pred CceEEeecCC-----cCCeEEEE-EeeeEEEEEEeCCEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCCC
Confidence 4778885432 34665422 23679999999999999999997543 677754 136788888 48888999
Q ss_pred CCeEEEEeccCc---------cccCccceecCCCcccCCeEEEEecCCCCCC---ceEEEEEEeeeecccc--------c
Q 036586 197 CDIALLTVKDDE---------FWEGVSPVEFGDLPALQDAVTVVGYPIGGDT---ISVTSGVVSRMEILSY--------V 256 (568)
Q Consensus 197 ~DlAlLkv~~~~---------~~~~l~~~~l~~~~~~g~~V~aiG~P~g~~~---~svt~GiIs~~~~~~~--------~ 256 (568)
.|||||+++... +...++++.|......|+.|+++|+|.+... +.++.|+|+......+ .
T Consensus 77 ~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~~~~i~~~~~~~~G 156 (210)
T 2as9_A 77 EDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKDNILNFDAYIEPG 156 (210)
T ss_dssp SSCEEEEECSEEEEEETTEEEGGGSCCCCCBCSCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEETTEEEEECCCCTT
T ss_pred CcEEEEEecCccccccccccccccccceeecCCCCCCCCEEEEEeCCCCCCCCcceEEeeeEEccccCCeEEEcCccCCC
Confidence 999999998631 1234678888655577899999999987542 2458899987532211 1
Q ss_pred CCCceeecccceEEEEEeeeecCCCCccccccccchhhhHhHHHhhh
Q 036586 257 HGSTELLGLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYEK 303 (568)
Q Consensus 257 ~ggspL~n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 303 (568)
.+||||+|.+|+||||++.+....+..+.+|++|++.+++|++....
T Consensus 157 dSGGPlv~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~~ 203 (210)
T 2as9_A 157 NSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIE 203 (210)
T ss_dssp CTTCEEECTTSCEEEEECCSCCCTTCSSEEEEECCHHHHHHHHTTCC
T ss_pred CccCcEECCCCeEEEEEecccccCCccccccEEEcHHHHHHHHHhhh
Confidence 35679999999999999987765566777899999999999988653
No 19
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.72 E-value=2.1e-17 Score=160.76 Aligned_cols=152 Identities=13% Similarity=0.119 Sum_probs=120.9
Q ss_pred CCceEEEEecCCCcccC-CCCCC-CEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPS-DIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIK 412 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~G-DiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~ 412 (568)
..|++|..|.++|||++ ||++| |+|++|||++|.++.+ +...+.....|+++.|+|+|++....++++
T Consensus 15 ~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~----------~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~ 84 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDND----------TLKDLLKANVEKPVKMLIYSSKTLELRETS 84 (209)
T ss_dssp SEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSS----------HHHHHHHHTTTSCEEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHH----------HHHHHHhcCCCCEEEEEEEecCCceEEEEE
Confidence 56999999999999999 99999 9999999999999988 344454556799999999998655555555
Q ss_pred eccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEecccccc
Q 036586 413 LSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINI 492 (568)
Q Consensus 413 l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~ 492 (568)
+..... . ....++|+.++.+++. .. ...|++|..|.+++++.
T Consensus 85 l~p~~~-~---------~~~~~lGi~~~~~~~~-~~---------------------------~~~Gv~V~~V~~~spA~ 126 (209)
T 3rle_A 85 VTPSNL-W---------GGQGLLGVSIRFCSFD-GA---------------------------NENVWHVLEVESNSPAA 126 (209)
T ss_dssp ECCCSS-S---------SSSSSSCEEEEEEECT-TG---------------------------GGSCEEEEEECTTSHHH
T ss_pred Eccccc-c---------cccCccceEEeecChh-Hc---------------------------cccceEEEEeCCCChHH
Confidence 532211 0 0123689988876521 11 11468999999998887
Q ss_pred cccccc-CcEEEeeCCEecCCHHHHHHHHHccCCCeEEEEEEcC
Q 036586 493 GYEEIV-NTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 493 g~~~~~-gd~I~~VNg~pV~~l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
..+++. ||+|++|||+ |.++++|.++|+.++++.+.|++.|+
T Consensus 127 ~aGl~~~GD~I~~ing~-v~~~~~l~~~l~~~~g~~v~l~v~r~ 169 (209)
T 3rle_A 127 LAGLRPHSDYIIGADTV-MNESEDLFSLIETHEAKPLKLYVYNT 169 (209)
T ss_dssp HHTCCTTTEEEEEESSC-CCSSSCHHHHHHHTTTSCEEEEEEET
T ss_pred HCCCCCCCCEEEECCCE-eCCHHHHHHHHHhCCCCeEEEEEEEC
Confidence 777889 9999999998 99999999999999888999999885
No 20
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.69 E-value=2.3e-16 Score=150.62 Aligned_cols=151 Identities=14% Similarity=0.197 Sum_probs=116.0
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECC--EEEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNS--EVHEFN 410 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g--~~~~v~ 410 (568)
..|++|..|.++|||++ | |++||+|++|||+++.++.+. .........|+.+.|+|.|++ ....++
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~----------~~~~~~~~~g~~v~l~v~r~~~~~~~~~~ 103 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHS----------AAVEALKEAGSIVRLYVMRRKPPAEKVME 103 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH----------HHHHHHHTSCSEEEEEEEEECCCCEEEEE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHH----------HHHHHHHhCCCcEEEEEEecCCCccccEE
Confidence 45899999999999999 9 999999999999999998763 233333346899999999987 455666
Q ss_pred EEeccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEecccc
Q 036586 411 IKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADI 490 (568)
Q Consensus 411 v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~ 490 (568)
+.+...+. -+||.+...... . ......+++|..|.++++
T Consensus 104 v~l~~~~~---------------~lG~~~~~~~~~------~--------------------~~~~~~gv~V~~V~~gs~ 142 (196)
T 3gsl_A 104 IKLIKGPK---------------GLGFSIAGGVGN------Q--------------------HIPGDNSIYVTKIIEGGA 142 (196)
T ss_dssp EEEEEBTT---------------BSCEEEEESBTS------C--------------------SBTTBCCEEEEEECTTSH
T ss_pred EEEecCCC---------------CceEEEEccCCC------c--------------------CCCCCCCEEEEEECCCCh
Confidence 66654322 256665542200 0 001234699999999988
Q ss_pred ccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 491 NIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 491 ~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
++..+ ++.||+|++|||++|.+ |+++.++|++. ++.+.|.+.|++.
T Consensus 143 A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 143 AHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT-YDVVYLKVAKPSN 191 (196)
T ss_dssp HHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSC-CEEEEEEEEEESC
T ss_pred HHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcC-CCeEEEEEeCCCC
Confidence 87777 77999999999999999 99999999865 6789999999764
No 21
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.64 E-value=5.3e-16 Score=149.08 Aligned_cols=148 Identities=12% Similarity=0.235 Sum_probs=116.3
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCC--CCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEE---
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVH--- 407 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~--- 407 (568)
..+++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..++....+|+.+.|+|.|+|+..
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~----------~~~~l~~~~~g~~v~l~v~R~~~~~~~~ 104 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEE----------ANQLLRDSSITSKVTLEIEFDVAESVIP 104 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHH----------HHHHHHTCCSSSEEEEEEEECSCSCCBC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhCCCCCeEEEEEEecCCCCCCC
Confidence 35799999999999999 9 99999999999999984 455 5677777666899999999998632
Q ss_pred ---EEEEEeccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEE
Q 036586 408 ---EFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQ 484 (568)
Q Consensus 408 ---~v~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~ 484 (568)
..++.+... ....+||.+...... ....+++|..
T Consensus 105 ~~~~~~v~l~~~--------------~~~~lG~~~~~~~~~-----------------------------~~~~gv~V~~ 141 (196)
T 1p1d_A 105 SSGTFHVKLPKK--------------HSVELGITISSPSSR-----------------------------KPGDPLVISD 141 (196)
T ss_dssp CSSCEEEEECCC--------------SSCCCCCEEECSCSS-----------------------------STTCCCEEEE
T ss_pred CCCcEEEEecCC--------------CCCCcCEEEECCCCC-----------------------------CCCCCEEEEE
Confidence 123333210 011468877765411 0123589999
Q ss_pred Eeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 485 VLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 485 V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
|.+++++...+ ++.||+|++|||++|.+ +++|.++|++. ++.+.|++.|++
T Consensus 142 V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 195 (196)
T 1p1d_A 142 IKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC-EDLVKLKIRKDE 195 (196)
T ss_dssp CCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC-TTCEEEEEECCC
T ss_pred ECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeCC
Confidence 99998888777 88999999999999999 99999999998 889999999985
No 22
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.63 E-value=2.3e-15 Score=144.91 Aligned_cols=151 Identities=15% Similarity=0.160 Sum_probs=115.1
Q ss_pred CCceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE------
Q 036586 335 QKGVRIRRIEPTAPESH--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV------ 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~------ 406 (568)
..|++|..|.++|||++ ||++||+|++|||++|.++.... +..++. ..|+.+.|+|.|+++.
T Consensus 32 ~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~~~~~~g~ 101 (200)
T 2qt5_A 32 DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDE--------IISLLK--NVGERVVLEVEYELPPVSIQGS 101 (200)
T ss_dssp SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHH--------HHHHHH--TCCSEEEEEEEEECCCCCCCCS
T ss_pred CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCeEEEEEeccCCCcccCCC
Confidence 45799999999999986 89999999999999999984311 333443 3588999999997742
Q ss_pred ----EEEEEEeccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEE
Q 036586 407 ----HEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVV 482 (568)
Q Consensus 407 ----~~v~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvv 482 (568)
..+.+++.... . .+||.+.....+ + .....+++|
T Consensus 102 ~~~~~~~~v~l~~~~------------~---~lG~~l~~g~~~-----~----------------------~~~~~g~~V 139 (200)
T 2qt5_A 102 SVMFRTVEVTLHKEG------------N---TFGFVIRGGAHD-----D----------------------RNKSRPVVI 139 (200)
T ss_dssp SEEEEEEEEEEECBT------------T---BCSEEEEEECCS-----S----------------------TTTCEEEEE
T ss_pred ccceeEEEEEEecCC------------C---CeEEEEECCCCC-----C----------------------ccCCCCEEE
Confidence 55566653211 1 357766543211 0 011346899
Q ss_pred EEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 483 SQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 483 s~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
+.|.+++++...+ ++.||+|++|||++|. ++++|.++|+. +++.+.|.+.|++..
T Consensus 140 ~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~~ 197 (200)
T 2qt5_A 140 TCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEATLLIEYDVSV 197 (200)
T ss_dssp EEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TCSEEEEEEEEEEEC
T ss_pred EEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECCcc
Confidence 9999998887777 7899999999999999 99999999998 788999999998764
No 23
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.59 E-value=4e-15 Score=147.44 Aligned_cols=151 Identities=21% Similarity=0.333 Sum_probs=106.8
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCe--EEEEEcCCC-------------cEEEEEEEEEeC---CCCeEEEEeccCc---
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQ--VKVKKRGSD-------------TKYLATVLSIGT---ECDIALLTVKDDE--- 208 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~--i~V~~~~dg-------------~~~~a~vv~~d~---~~DlAlLkv~~~~--- 208 (568)
..|+||+|++++||||||++.+... +.|.+. +| ..+.++++..|+ ..|||||+++...
T Consensus 55 ~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~~~-~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~~ 133 (242)
T 1agj_A 55 TSATGVLIGKNTVLTNRHIAKFANGDPSKVSFR-PSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNGV 133 (242)
T ss_dssp EEEEEEECSSSEEEECHHHHGGGTTCGGGEEEE-ETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTSC
T ss_pred ccEEEEEEeCCEEEEChhhcccCCCCceEEEEe-cCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCccc
Confidence 5799999999999999999976432 344442 22 357889998898 8999999998763
Q ss_pred -cccCccceecCCC--cccCCeEEEEecCCCCCCceEEEEEEeeeeccc---------ccCCCceeecccceEEEEEeee
Q 036586 209 -FWEGVSPVEFGDL--PALQDAVTVVGYPIGGDTISVTSGVVSRMEILS---------YVHGSTELLGLQGKCVGIAFQS 276 (568)
Q Consensus 209 -~~~~l~~~~l~~~--~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~---------~~~ggspL~n~~G~VVGI~~~~ 276 (568)
+...++++.|.+. ...|+.++++|+|.+.....+....+.-+.... ...+||||+|.+|+||||++.+
T Consensus 134 ~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~~~~~~~~~~~~c~GdSGGPl~~~~g~lvGI~s~g 213 (242)
T 1agj_A 134 SLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTTLSRGLRYYGFTVPGNSGSGIFNSNGELVGIHSSK 213 (242)
T ss_dssp CHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECCGGGSEEEECCCCGGGTTCEEECTTSEEEEEEEEE
T ss_pred cccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEecCCceEEEeCCcCCCCCchHhcccCCEEEEEEecc
Confidence 1124788889754 356899999999987553223333332221110 1146779999999999999987
Q ss_pred ecCC-CCccccccccch-hhhHhHHHh
Q 036586 277 LKND-DVENIGYVIPTP-VIIHFIQDY 301 (568)
Q Consensus 277 ~~~~-~~~~~~~aIP~~-~i~~~l~~l 301 (568)
..-. +..+.+|++|+. .++++|++.
T Consensus 214 ~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 214 VSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp EECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred ccccCcCCCceeeEEehHHHHHHHHhh
Confidence 6422 345788999985 788888764
No 24
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.59 E-value=2e-15 Score=145.05 Aligned_cols=161 Identities=21% Similarity=0.385 Sum_probs=109.5
Q ss_pred CCcccccCCCcceEEEEEEeCCEEEEcccccCCCC----eEEEEE---cCCCcEEEE-EEEEEeCCCCeEEEEeccCc--
Q 036586 139 SLPWQRKRQYSSSSSGFIVGGRRVLTNAHSVEHHT----QVKVKK---RGSDTKYLA-TVLSIGTECDIALLTVKDDE-- 208 (568)
Q Consensus 139 ~~p~~~~~~~~~~GSGfiI~~G~ILTn~HVV~~~~----~i~V~~---~~dg~~~~a-~vv~~d~~~DlAlLkv~~~~-- 208 (568)
..||.-.. ....|+||+|++++||||+|++.+.. .+.|.+ ..++..+.+ +++.+|+..|||||+++...
T Consensus 12 ~~P~~v~~-~~~~c~G~lI~~~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~ 90 (200)
T 2w7s_A 12 KEPYNSVV-AFVGGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTE 90 (200)
T ss_dssp STTGGGEE-EETTEEEEEEETTEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSBCTT
T ss_pred cCCccccc-ccceEEEEEEECCEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCCCCC
Confidence 35665422 13579999999999999999997533 355543 135677877 58888999999999998741
Q ss_pred ---cccCccceecCCCcccCCeEEEEecCCCCCC---ceEEEEEEeeeecccc--------cCCCceeecccceEEEEEe
Q 036586 209 ---FWEGVSPVEFGDLPALQDAVTVVGYPIGGDT---ISVTSGVVSRMEILSY--------VHGSTELLGLQGKCVGIAF 274 (568)
Q Consensus 209 ---~~~~l~~~~l~~~~~~g~~V~aiG~P~g~~~---~svt~GiIs~~~~~~~--------~~ggspL~n~~G~VVGI~~ 274 (568)
+.+.++|+.|......|+.++++|+|.|... ..++.|+|+......+ ..+||||+|.+|+||||++
T Consensus 91 ~~~~~~~v~pi~l~~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~GdSGGPl~~~~g~lvGI~s 170 (200)
T 2w7s_A 91 GLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISGTFMEFDAYAQPGNSGSPVLNSKHELIGILY 170 (200)
T ss_dssp SCBGGGSCCCCCBCCCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEETTEEEECSCCCTTCTTCEEECTTSCEEEEEE
T ss_pred cccccccccceeccccCCCCCEEEEEECCCCCCCccceEEeEEEEEccCCCEEEEcceeCCCCccCeEECcCCEEEEEEe
Confidence 2235778888655567899999999986432 2457888886532111 1366799999999999999
Q ss_pred eeecCCCCccccccc-cchhhhHhHHHh
Q 036586 275 QSLKNDDVENIGYVI-PTPVIIHFIQDY 301 (568)
Q Consensus 275 ~~~~~~~~~~~~~aI-P~~~i~~~l~~l 301 (568)
.+... +....+|++ ....+++++++.
T Consensus 171 ~g~~~-~~~~~~~~v~~~~~~~~wI~~~ 197 (200)
T 2w7s_A 171 AGSGK-DESEKNFGVYFTPQLKEFIQNN 197 (200)
T ss_dssp EEC-----CCCEEEEECCHHHHHHHHHT
T ss_pred ccccC-CCCccceeeecHHHHHHHHHhh
Confidence 86531 113345555 345566666553
No 25
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.57 E-value=2.1e-14 Score=138.50 Aligned_cols=141 Identities=15% Similarity=0.179 Sum_probs=105.4
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCC--CCCCccccCccchHHHHHhccCCCCE-EEEEEEECCEEE--E
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDS-AVVKVLRNSEVH--E 408 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~l~~~~~g~~-v~l~V~R~g~~~--~ 408 (568)
.|++|..|.++|||++ | |++||+|++|||++|.+ +.... +..++. ..++. +.|+|+|+++.. .
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~--------~~~~~~--~~~~~~v~l~v~R~~~~~~~~ 114 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLK--------VHQLFH--TTYEKAVTLTVFRADPPELEK 114 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHH--------HHHHHH--SCCSSEEEEEEECCSSCCEEE
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHH--------HHHHHH--hcCCCceEEEEEecccCCCcE
Confidence 5899999999999999 8 99999999999999998 43311 222332 34555 999999988654 4
Q ss_pred EEEEeccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEecc
Q 036586 409 FNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVA 488 (568)
Q Consensus 409 v~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~ 488 (568)
+++.+..... ..+||.+.... .+++|..|.++
T Consensus 115 ~~v~l~~~~~--------------~~lG~~~~~~~----------------------------------~gv~V~~V~~g 146 (206)
T 3r0h_A 115 FNVDLMKKAG--------------KELGLSLSPNE----------------------------------IGCTIADLIQG 146 (206)
T ss_dssp EEEEEECCTT--------------CCCCEEEEECS----------------------------------SCEEEEEECTT
T ss_pred EEEEEecCCC--------------CccCeEEEcCC----------------------------------ceEEEEEECCC
Confidence 4444432210 13677665311 34899999999
Q ss_pred ccccccc-cccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcC
Q 036586 489 DINIGYE-EIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 489 ~~~~g~~-~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
++++..+ ++.||+|++|||++|.++ +++..++++. ++.+.|.+.|.
T Consensus 147 s~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~~v~L~V~R~ 195 (206)
T 3r0h_A 147 QYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGA-NGKVSMEVTRP 195 (206)
T ss_dssp SCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEEE
T ss_pred ChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeC
Confidence 8877776 789999999999999965 8889999864 56899999884
No 26
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.56 E-value=2.5e-14 Score=137.32 Aligned_cols=162 Identities=23% Similarity=0.403 Sum_probs=108.9
Q ss_pred CCcccccCCCcceEEEEEEeCCEEEEcccccCCCC---eEEEEE---cCCCcEEE-EEEEEEeCCCCeEEEEeccCc---
Q 036586 139 SLPWQRKRQYSSSSSGFIVGGRRVLTNAHSVEHHT---QVKVKK---RGSDTKYL-ATVLSIGTECDIALLTVKDDE--- 208 (568)
Q Consensus 139 ~~p~~~~~~~~~~GSGfiI~~G~ILTn~HVV~~~~---~i~V~~---~~dg~~~~-a~vv~~d~~~DlAlLkv~~~~--- 208 (568)
..||.-.. ..+.|+||+|++.+||||||++.+.. .+.+.. ..++..+. ++++.+++..|||||+++...
T Consensus 12 ~~P~~~~~-~~~~c~G~lI~~~~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~ 90 (204)
T 2vid_A 12 IFPYTGVV-AFKSATGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIER 90 (204)
T ss_dssp STTGGGEE-ECSSCEEEEEETTEEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEEEEE
T ss_pred cCchhheE-EeeeEEEEEEECCEEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCccccc
Confidence 45665421 23579999999999999999998654 555532 12456676 578888889999999998531
Q ss_pred ------cccCccceecCCCcccCCeEEEEecCCCCCC---ceEEEEEEeeeecccc--------cCCCceeecccceEEE
Q 036586 209 ------FWEGVSPVEFGDLPALQDAVTVVGYPIGGDT---ISVTSGVVSRMEILSY--------VHGSTELLGLQGKCVG 271 (568)
Q Consensus 209 ------~~~~l~~~~l~~~~~~g~~V~aiG~P~g~~~---~svt~GiIs~~~~~~~--------~~ggspL~n~~G~VVG 271 (568)
+...+.++.|.+....++.++++|+|.+... +..+.|+|+.+....+ ..+||||+|.+|+|||
T Consensus 91 ~~~~~~~~~~v~pi~l~~~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~~~~~~~~~~~~~GdSGGPl~~~~g~lvG 170 (204)
T 2vid_A 91 GPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGSSIVYSAHTESGNSGSPVLNSNNELVG 170 (204)
T ss_dssp ETTEEEHHHHCCCCCBCSCCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEETTEEEECCCCCGGGTTCEEECTTSCEEE
T ss_pred ccccccccccccccccCCcCCCCCEEEEEeCCCCCCCCcceEeeccEEeeccCCeEEEecccCCCCccCcEECCCCeEEE
Confidence 1123577788765577899999999987542 2466788886542211 1467799999999999
Q ss_pred EEeeeecCCCCccccccc-cchhhhHhHHHh
Q 036586 272 IAFQSLKNDDVENIGYVI-PTPVIIHFIQDY 301 (568)
Q Consensus 272 I~~~~~~~~~~~~~~~aI-P~~~i~~~l~~l 301 (568)
|++.+.........+|++ +...+++++++.
T Consensus 171 I~s~g~~~~~~~~~~~~~~~~~~~~~wI~~~ 201 (204)
T 2vid_A 171 IHFASDVKNDDNRNAYGVYFTPEIKKFIAEN 201 (204)
T ss_dssp EEEEECC---CCCCEEEECCCHHHHHHHHHH
T ss_pred EEecCccCCCcccccceeEeCHHHHHHHHhh
Confidence 999865211223445544 335566666654
No 27
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.51 E-value=1.1e-13 Score=129.30 Aligned_cols=130 Identities=15% Similarity=0.223 Sum_probs=98.6
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHh
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~ 388 (568)
++|||+.+... ..|++|..|.++|||++ ||++||+|++|||++|.++.+. +...+.
T Consensus 15 ~~~lG~~~~~~--------------~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~---------~~~~~~ 71 (166)
T 1w9e_A 15 DGKIGLRLKSI--------------DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSD---------KAHKVL 71 (166)
T ss_dssp TSCCSEEEEEE--------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH---------HHHHHH
T ss_pred CCcEeEEEEeC--------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHH---------HHHHHH
Confidence 68999999876 35899999999999999 9999999999999999998761 122333
Q ss_pred ccCCCCEEEEEEEECCEEEEEEEEeccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHH
Q 036586 389 QKYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLL 468 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~ 468 (568)
....|+.+.|+|.|+++.++++++-.. ...+||.+..
T Consensus 72 ~~~~~~~v~l~vr~~~~~~~v~l~~~~----------------~~~lG~~~~~--------------------------- 108 (166)
T 1w9e_A 72 KQAFGEKITMTIRDRPFERTITMHKDS----------------TGHVGFIFKN--------------------------- 108 (166)
T ss_dssp HHCCSSEEEEEEECCTTCEEEEEECCT----------------TSCCSEEEET---------------------------
T ss_pred hcCCCCEEEEEEEcCCCcEEEEEecCC----------------CCcEeEEEeC---------------------------
Confidence 344778999999444377776665311 0124665430
Q ss_pred hhhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHH
Q 036586 469 HAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSL 516 (568)
Q Consensus 469 ~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f 516 (568)
+ +|..+.+++++...+++.||+|++|||+++.+|...
T Consensus 109 ----------g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~ 145 (166)
T 1w9e_A 109 ----------G-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDS 145 (166)
T ss_dssp ----------T-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHH
T ss_pred ----------C-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChH
Confidence 1 578888888777777889999999999999998643
No 28
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.50 E-value=1.5e-13 Score=132.39 Aligned_cols=137 Identities=14% Similarity=0.138 Sum_probs=102.4
Q ss_pred ceEEEEEEeC---CEEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEe-CCCCeEEEEeccCccccCccce-------ec
Q 036586 150 SSSSGFIVGG---RRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIG-TECDIALLTVKDDEFWEGVSPV-------EF 218 (568)
Q Consensus 150 ~~GSGfiI~~---G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~l~~~-------~l 218 (568)
...+||++.+ ++||||+||+.....+. . + ..+.|++++.| +..|+||||++.... ..+.+ .+
T Consensus 16 ~CT~Gf~v~~~~~~~ilTa~Hc~~~~~~v~--~--~-~~~~g~vv~~~~~~~D~Avi~i~~~~~--~~~~v~~~g~~~~v 88 (198)
T 2h5c_A 16 LCSVGFSVTRGATKGFVTAGHCGTVNATAR--I--G-GAVVGTFAARVFPGNDRAWVSLTSAQT--LLPRVANGSSFVTV 88 (198)
T ss_dssp EEECCEEEEETTEEEEEECGGGCCTTCEEE--E--T-TEEEEEEEEEECSBSCEEEEEECTTSE--EEEEEEETTEEEEC
T ss_pred CCCcCEEEecCCeeEEEECcccCCCCCEEE--e--C-CcEEEEEEecCCCCCCEEEEEeCCCCc--cCceEecCCceEEe
Confidence 4578999963 69999999999888776 3 4 48889999999 999999999987531 12222 23
Q ss_pred CC--CcccCCeEEEEecCCCCCCceEEEEEEeeeeccc----------------ccC--CCceeecccceEEEEEeeee-
Q 036586 219 GD--LPALQDAVTVVGYPIGGDTISVTSGVVSRMEILS----------------YVH--GSTELLGLQGKCVGIAFQSL- 277 (568)
Q Consensus 219 ~~--~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~----------------~~~--ggspL~n~~G~VVGI~~~~~- 277 (568)
.. ...+|++|..+|+|.+ ++.|+|+.+++.. ..+ +||||+|.+|++|||+++..
T Consensus 89 ~g~~~~~vG~~V~~~G~~tg-----~t~G~V~~~~~~~~~~~g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~ 163 (198)
T 2h5c_A 89 RGSTEAAVGAAVCRSGRTTG-----YQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNV 163 (198)
T ss_dssp CBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECC
T ss_pred cCcccCCCCCeEEEeecCcc-----eEEEEEEeeeeEEEeCCCeEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecC
Confidence 32 4578999999999887 5778888775421 113 45699999999999999973
Q ss_pred cCC-------CCccccccccchhhhHhH
Q 036586 278 KND-------DVENIGYVIPTPVIIHFI 298 (568)
Q Consensus 278 ~~~-------~~~~~~~aIP~~~i~~~l 298 (568)
... ...+++|++|++.+++.+
T Consensus 164 ~~~~~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 164 QSNGNNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp CTTSBSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred ccCCCccccccCCceEEEEEHHHHHHHC
Confidence 211 224689999999887665
No 29
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.50 E-value=3.8e-13 Score=135.97 Aligned_cols=150 Identities=19% Similarity=0.269 Sum_probs=106.5
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCe----EEEEEc-------CCCcEEEEEEEEEeCCCCeEEEEeccCc----cccCcc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQ----VKVKKR-------GSDTKYLATVLSIGTECDIALLTVKDDE----FWEGVS 214 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~----i~V~~~-------~dg~~~~a~vv~~d~~~DlAlLkv~~~~----~~~~l~ 214 (568)
..|+||+|++++|||+||+|.+... +.|.+. .++....++++..+...|||||+++... +...+.
T Consensus 34 ~~C~G~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v~ 113 (274)
T 2o8l_A 34 FIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVK 113 (274)
T ss_dssp EEEEEEEEETTEEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCTTTSSC
T ss_pred EEEEEEEEECCEEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeCCCCCcEEEEEecCcccccccccccc
Confidence 5799999999999999999976543 777641 2345556678888888999999998652 334688
Q ss_pred ceecCCCc--ccCCeEEEEecCCCCC--CceEEEEEEeeeecccc--------cCCCceeecccceEEEEEeeeecCCCC
Q 036586 215 PVEFGDLP--ALQDAVTVVGYPIGGD--TISVTSGVVSRMEILSY--------VHGSTELLGLQGKCVGIAFQSLKNDDV 282 (568)
Q Consensus 215 ~~~l~~~~--~~g~~V~aiG~P~g~~--~~svt~GiIs~~~~~~~--------~~ggspL~n~~G~VVGI~~~~~~~~~~ 282 (568)
++.|.... ..|+.|+++|+|.+.. ....+.|+|+.+....+ ..+||||++.+|+||||++.+.. ..
T Consensus 114 pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~~~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~--~~ 191 (274)
T 2o8l_A 114 PATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVP--NE 191 (274)
T ss_dssp CCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEETTEEEESCCCCTTCTTCEEECTTSCEEEEEEEEET--TT
T ss_pred cccccccccccCCCEEEEEECCCCCCCceEEecCceEEecCCCeEEeCcccCCCCchhheeccCCeEEEEEeCccc--CC
Confidence 89997643 5689999999998743 22356788876532211 13677999999999999998653 22
Q ss_pred ccccccccchhhhHhHHHhh
Q 036586 283 ENIGYVIPTPVIIHFIQDYE 302 (568)
Q Consensus 283 ~~~~~aIP~~~i~~~l~~l~ 302 (568)
.+.++.+. ..++.++++.+
T Consensus 192 ~~~~~~~~-~~~~~wI~~~i 210 (274)
T 2o8l_A 192 FNGAVFIN-ENVRNFLKQNI 210 (274)
T ss_dssp EEEEEECC-HHHHHHHHHHC
T ss_pred CCceEEec-HHHHHHHHHHH
Confidence 34455553 45566666554
No 30
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.49 E-value=1.1e-13 Score=137.75 Aligned_cols=139 Identities=19% Similarity=0.296 Sum_probs=97.8
Q ss_pred ceEEEEEEeCCEEEEcccccCCCC----eEEEEEcC--C---------CcEEEEEEEEEeC---CCCeEEEEeccCc---
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHT----QVKVKKRG--S---------DTKYLATVLSIGT---ECDIALLTVKDDE--- 208 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~----~i~V~~~~--d---------g~~~~a~vv~~d~---~~DlAlLkv~~~~--- 208 (568)
..|+||+|++++||||+||+.+.. .+.+.... . +..+.++.+..|+ ..|||||+++...
T Consensus 48 ~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~~~~~~ 127 (246)
T 1qtf_A 48 TLATGVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEKGE 127 (246)
T ss_dssp EEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECCCTTSC
T ss_pred ceEEEEEEECCEEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeCCcccc
Confidence 579999999999999999997654 36665421 0 1478899999998 9999999998763
Q ss_pred -cccCccceecCCC--cccCCeEEEEecCCCCCCceEEEEEEeeeecccc------cCCCceeecccceEEEEEeeeecC
Q 036586 209 -FWEGVSPVEFGDL--PALQDAVTVVGYPIGGDTISVTSGVVSRMEILSY------VHGSTELLGLQGKCVGIAFQSLKN 279 (568)
Q Consensus 209 -~~~~l~~~~l~~~--~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~~------~~ggspL~n~~G~VVGI~~~~~~~ 279 (568)
+...++++.|.+. ...|+.|+++|+|.+..........+.-.....+ ..+||||+|.+|+||||++.+.
T Consensus 128 ~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~~~~~~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~-- 205 (246)
T 1qtf_A 128 SAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEMFNDSQYFGYTEVGNSGSGIFNLKGELIGIHSGKG-- 205 (246)
T ss_dssp CHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEESSSSBEESCCCGGGTTCEEECTTCCEEEEEEEEE--
T ss_pred ccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeeecCcEEEeCCCCCCCchhheECCCCEEEEEEeccc--
Confidence 1124788888754 3568999999999886532222222221111111 1367799999999999999854
Q ss_pred CCCccccccccchhhh
Q 036586 280 DDVENIGYVIPTPVII 295 (568)
Q Consensus 280 ~~~~~~~~aIP~~~i~ 295 (568)
.+|++|++.+.
T Consensus 206 -----~~~~ipi~~~~ 216 (246)
T 1qtf_A 206 -----GQHNLPIGVFF 216 (246)
T ss_dssp -----TTTTEEEEEET
T ss_pred -----cCccccchhhh
Confidence 26888876553
No 31
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.47 E-value=1.4e-13 Score=127.97 Aligned_cols=117 Identities=16% Similarity=0.107 Sum_probs=91.0
Q ss_pred CCceEEEEeEeecCCCCCcccccCCCcceEEEEEEe-CCEEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEeCCCCeEE
Q 036586 123 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVG-GRRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIGTECDIAL 201 (568)
Q Consensus 123 ~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d~~~DlAl 201 (568)
...||.|.... .+.||||+|+ +++|||++|||.++....|++ +|.++. +.+++..|||+
T Consensus 3 ~~n~~~v~g~~---------------~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~--~G~~~~---Vgf~~~~DlA~ 62 (198)
T 1mbm_A 3 RGNVGFVAGSS---------------YGTGSVWTRNNEVVVLTASHVVGRANMATLKI--GDAMLT---LTFKKNGDFAE 62 (198)
T ss_dssp CTTEEEEESSS---------------EEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE--TTEEEE---EECEEETTEEE
T ss_pred ccceEEEeccc---------------CCccceEEECCCeEEEEeeeEEccCceEEEEE--CCEEEE---eecccCCcEEE
Confidence 34788886533 3789999999 899999999999999999999 888887 78889999999
Q ss_pred EEe---ccCccccCccceecCCCcccCCeEEEEecCCCCCCceEEEEEEeeeec-------ccccCCCceeecccceEEE
Q 036586 202 LTV---KDDEFWEGVSPVEFGDLPALQDAVTVVGYPIGGDTISVTSGVVSRMEI-------LSYVHGSTELLGLQGKCVG 271 (568)
Q Consensus 202 Lkv---~~~~~~~~l~~~~l~~~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~-------~~~~~ggspL~n~~G~VVG 271 (568)
+++ +.. ..+|+++|+. +++|+.- ...+.|+++.+.. ....++|||++|.+ +|||
T Consensus 63 l~v~~~~~~---g~~P~l~las-p~vG~a~-----------~~~~tG~~~~l~g~~g~l~~t~PGDSGsPVl~~~-~vIG 126 (198)
T 1mbm_A 63 AVTTQSELP---GNWPQLHFAQ-PTTGPAS-----------WCTATGDEEGLLSGEVCLAWTTSGDSGSAVVQGD-AVVG 126 (198)
T ss_dssp EEECTTTSC---SCCCBCCBCC-CCSEEEE-----------EEETTEEEEEEECSSCEECCCCGGGTTCEEEETT-EEEE
T ss_pred EEeeccCCC---CCCcccccCC-CcccceE-----------EeeccccEEEEecCCceeEcCCCCCCCCccccCC-eEEE
Confidence 999 544 3678999966 6777611 1345566665532 23335677999999 9999
Q ss_pred EEee
Q 036586 272 IAFQ 275 (568)
Q Consensus 272 I~~~ 275 (568)
|+++
T Consensus 127 V~T~ 130 (198)
T 1mbm_A 127 VHTG 130 (198)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9998
No 32
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.46 E-value=8.7e-13 Score=132.94 Aligned_cols=151 Identities=19% Similarity=0.278 Sum_probs=107.0
Q ss_pred ceEEEEEEeCCEEEEcccccCCCC----eEEEEEc-------CCCcEEEEEEEEEeCCCCeEEEEeccCc----cccCcc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHT----QVKVKKR-------GSDTKYLATVLSIGTECDIALLTVKDDE----FWEGVS 214 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~----~i~V~~~-------~dg~~~~a~vv~~d~~~DlAlLkv~~~~----~~~~l~ 214 (568)
..|+||+|++.+|||+||+|.+.. .+.|.+. .++....++++..+...||||||+.... +...+.
T Consensus 34 ~~CgG~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v~ 113 (268)
T 1wcz_A 34 FIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVK 113 (268)
T ss_dssp EEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCHHHHSC
T ss_pred EEEEEEEEECCEEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCcccccccccccc
Confidence 679999999999999999997643 3777642 2344556678888888999999998753 223577
Q ss_pred ceecCCC--cccCCeEEEEecCCCCC--CceEEEEEEeeeecccc--------cCCCceeecccceEEEEEeeeecCCCC
Q 036586 215 PVEFGDL--PALQDAVTVVGYPIGGD--TISVTSGVVSRMEILSY--------VHGSTELLGLQGKCVGIAFQSLKNDDV 282 (568)
Q Consensus 215 ~~~l~~~--~~~g~~V~aiG~P~g~~--~~svt~GiIs~~~~~~~--------~~ggspL~n~~G~VVGI~~~~~~~~~~ 282 (568)
++.|... ...++.++++|+|.+.. ....+.|+|+.+....+ ..+||||++.+|+||||++.+.. ..
T Consensus 114 pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~~~i~~~~~~c~GdSGGPLv~~~g~lvGIvS~G~~--~~ 191 (268)
T 1wcz_A 114 PATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLKGEAMQYDLSTTGGNSGSPVFNEKNEVIGIHWGGVP--NE 191 (268)
T ss_dssp CCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEETTEEEESBCCCTTCTTCEEECTTSCEEEEEEEEET--TT
T ss_pred eeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeCCCeEEEecccCCCCccCeEEccCCEEEEEEeCCcc--CC
Confidence 8888754 35689999999997643 23456788876542211 13677999999999999998653 22
Q ss_pred ccccccccchhhhHhHHHhhh
Q 036586 283 ENIGYVIPTPVIIHFIQDYEK 303 (568)
Q Consensus 283 ~~~~~aIP~~~i~~~l~~l~~ 303 (568)
.+.++++. ..++.++++.+.
T Consensus 192 ~~~~~~~~-~~~~~wI~~~i~ 211 (268)
T 1wcz_A 192 FNGAVFIN-ENVRNFLKQNIE 211 (268)
T ss_dssp EEEEEECC-HHHHHHHHHHCT
T ss_pred cceeEEcC-HHHHHHHHHHHH
Confidence 34556664 556667766543
No 33
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.42 E-value=2.3e-13 Score=118.95 Aligned_cols=97 Identities=21% Similarity=0.308 Sum_probs=80.5
Q ss_pred CccccCceeeEEEEEcCCHHHHHhcCCC-----CCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccC
Q 036586 305 GAYTGFPILGVEWQKMENPDLRISMGMR-----PGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHG 378 (568)
Q Consensus 305 g~~~~~~~lGi~~~~~~~~~~~~~lgl~-----~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~ 378 (568)
|++. |+|||+.+..+ ++.+++.++++ ....|++|..|.++|||++ ||++||+|++|||++|.++.+
T Consensus 1 G~v~-r~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~------ 72 (113)
T 2pzd_A 1 GSHM-RRYIGVMMLTL-SPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAED------ 72 (113)
T ss_dssp -----CEECCEEEEEC-CHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHH------
T ss_pred Cccc-ccEeEEEEEeC-CHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHH------
Confidence 4566 89999999999 99999999873 2357999999999999999 999999999999999998766
Q ss_pred ccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEeccC
Q 036586 379 ERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTH 416 (568)
Q Consensus 379 ~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~~~ 416 (568)
+..++.. |+.+.|+|.|+|+.+++++++...
T Consensus 73 ----~~~~l~~---~~~v~l~v~R~g~~~~~~v~~~~~ 103 (113)
T 2pzd_A 73 ----VYEAVRT---QSQLAVQIRRGRETLTLYVTPEVT 103 (113)
T ss_dssp ----HHHHHHH---CSSEEEEEEETTEEEEEEECCEEC
T ss_pred ----HHHHHhC---CCeEEEEEEECCEEEEEEEEEeec
Confidence 5555554 688999999999998888877543
No 34
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.39 E-value=3.6e-12 Score=121.77 Aligned_cols=135 Identities=13% Similarity=0.061 Sum_probs=99.2
Q ss_pred ceEEEEEEe--CC--EEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEe-CCCCeEEEEeccCccccCccc---------
Q 036586 150 SSSSGFIVG--GR--RVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIG-TECDIALLTVKDDEFWEGVSP--------- 215 (568)
Q Consensus 150 ~~GSGfiI~--~G--~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~l~~--------- 215 (568)
...+||++. +| +||||+||+.....+ .+ .| +.|++++.| +..|+||||++.... ..+.
T Consensus 14 ~CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v--~~-~d---~~g~v~~~~~p~~DiAlikl~~~~~--~~~~v~~~g~~~~ 85 (188)
T 2oua_A 14 RCSVGFAATNASGQPGFVTAGHCGSVGTQV--SI-GN---GRGVFERSVFPGNDAAFVRGTSNFT--LTNLVSRYNSGGY 85 (188)
T ss_dssp EEECCEEEECTTCCEEEEECGGGCCTTCEE--EE-TT---EEEEEEEEECSBSCEEEEEEEESCE--EEEEEECGGGCSE
T ss_pred cEecCEEEEeCCCCEEEEECcccCCCCCEE--Ee-cC---ceEEEEeeCCCCCCEEEEEeCCCCc--cccceeecCCcce
Confidence 568999995 78 999999999876665 34 35 899999999 999999999986531 1121
Q ss_pred eecCC--CcccCCeEEEEecCCCCCCceEEEEEEeeeeccc------------------ccCCCceeecccceEEEEEee
Q 036586 216 VEFGD--LPALQDAVTVVGYPIGGDTISVTSGVVSRMEILS------------------YVHGSTELLGLQGKCVGIAFQ 275 (568)
Q Consensus 216 ~~l~~--~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~------------------~~~ggspL~n~~G~VVGI~~~ 275 (568)
+++.. ...+|++|..+|+|.| .+.|+|+.+++.. ...+||||+. +|++|||+++
T Consensus 86 ~~l~~~~~~~vG~~v~~~G~~tG-----~t~G~v~~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~ 159 (188)
T 2oua_A 86 ATVSGSSTAPIGSQVCRSGSTTG-----WYCGTIQARNQTVSYPQGTVHSLTRTSVCAEPGDSGGSFIS-GTQAQGVTSG 159 (188)
T ss_dssp EECCBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEE
T ss_pred EeccCccCCCCCCeEEEEEcCCC-----eEEEEEEEEeeEEEeCCCcEeeeEeeeeecCCCCccceEEE-CCEEEEEEec
Confidence 24543 3477899999999987 4678887765321 1135669994 8999999998
Q ss_pred eecCCCCccccccccchhhhHhH
Q 036586 276 SLKNDDVENIGYVIPTPVIIHFI 298 (568)
Q Consensus 276 ~~~~~~~~~~~~aIP~~~i~~~l 298 (568)
........+.+|++|++.+++.+
T Consensus 160 ~~~~~~~~~~~~~~pi~~~l~~~ 182 (188)
T 2oua_A 160 GSGNCRTGGTTFYQEVNPMLNSW 182 (188)
T ss_dssp EEEETTTEEEEEEEESHHHHHHT
T ss_pred cCCCCCCCCceEEEEHHHHHHHc
Confidence 64322345679999998776554
No 35
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.39 E-value=2.5e-13 Score=118.51 Aligned_cols=97 Identities=18% Similarity=0.338 Sum_probs=82.6
Q ss_pred CccccCceeeEEEEEcCCHHHHHhcCCCC-----CCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccC
Q 036586 305 GAYTGFPILGVEWQKMENPDLRISMGMRP-----GQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHG 378 (568)
Q Consensus 305 g~~~~~~~lGi~~~~~~~~~~~~~lgl~~-----~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~ 378 (568)
|++. ++|+|+.++.+ ++.+++.|+++. ...|++|..|.++|||++ ||++||+|++|||++|.++.+
T Consensus 1 G~v~-~~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~------ 72 (112)
T 2p3w_A 1 GSHM-KRFIGIRMRTI-TPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSE------ 72 (112)
T ss_dssp CCCC-EEECCEEEEEC-CHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHH------
T ss_pred CCcc-cceeeEEEecC-CHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHH------
Confidence 4566 89999999999 999999998742 357999999999999999 999999999999999998876
Q ss_pred ccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEeccC
Q 036586 379 ERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLSTH 416 (568)
Q Consensus 379 ~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~~~ 416 (568)
|..++. .|+.+.|+|.|+|+.+++.+++...
T Consensus 73 ----~~~~l~---~g~~v~l~v~R~g~~~~~~v~~~~~ 103 (112)
T 2p3w_A 73 ----LQEAVL---TESPLLLEVRRGNDDLLFSIAPEVV 103 (112)
T ss_dssp ----HHHHHH---HCSSEEEEEEETTEEEEEEECCEEE
T ss_pred ----HHHHHh---CCCeEEEEEEECCEEEEEEEEEeee
Confidence 455552 4788999999999998888876644
No 36
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.32 E-value=7.4e-12 Score=142.81 Aligned_cols=153 Identities=13% Similarity=0.181 Sum_probs=112.7
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE--EEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV--HEFN 410 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~--~~v~ 410 (568)
..|++|..|.++|||++ | |+.||+|++|||+.|.++.... +..++. ..|+.|.|+|.|++.. ..++
T Consensus 88 ~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~~~~~~~~ 157 (721)
T 2xkx_A 88 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSA--------AVEALK--EAGSIVRLYVMRRKPPAEKVME 157 (721)
T ss_pred CCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHhh--ccccccceEEEeccccccccee
Confidence 45899999999999999 9 9999999999999999886421 223332 3688999999998854 2345
Q ss_pred EEeccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEecccc
Q 036586 411 IKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADI 490 (568)
Q Consensus 411 v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~ 490 (568)
++|.... . -+||.+...... . . .+...|++|+.|.++++
T Consensus 158 v~l~k~~-------~--------~lG~~i~~~~~~----~-~---------------------~~~~~gv~V~~V~~gs~ 196 (721)
T 2xkx_A 158 IKLIKGP-------K--------GLGFSIAGGVGN----Q-H---------------------IPGDNSIYVTKIIEGGA 196 (721)
T ss_pred eeeeeec-------C--------CCceeeccCCCc----c-c---------------------cCCCCceEEEEeCCCCc
Confidence 5543210 0 256665442210 0 0 01235799999999988
Q ss_pred ccccc-cccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCeEEE
Q 036586 491 NIGYE-EIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQIVV 539 (568)
Q Consensus 491 ~~g~~-~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~~~~ 539 (568)
+...| ++.||+|++|||++|.++ .++..+++.. ++.+.|.+.|++...
T Consensus 197 A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~V~R~g~~~ 247 (721)
T 2xkx_A 197 AHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT-YDVVYLKVAKPSNAY 247 (721)
T ss_pred hhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcC-CCeEEEEEEeCCccc
Confidence 87777 889999999999999986 6788888765 568999999988653
No 37
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.31 E-value=1.9e-11 Score=116.57 Aligned_cols=138 Identities=16% Similarity=0.164 Sum_probs=97.1
Q ss_pred ceEEEEEEe-C--CEEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEe-CCCCeEEEEeccCccccCccceec-------
Q 036586 150 SSSSGFIVG-G--RRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIG-TECDIALLTVKDDEFWEGVSPVEF------- 218 (568)
Q Consensus 150 ~~GSGfiI~-~--G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~l~~~~l------- 218 (568)
...+||++. + +|||||+||+.+...+. + .++....+++.+.+ +..|+||||++.... ..+.+.+
T Consensus 13 ~CT~Gfiv~~~g~~~ilT~~Hv~~~~~~v~--~-~~~~~~~g~~~~~~~~~~DiAlikl~~~~~--~~~~v~~~~g~~~~ 87 (187)
T 1hpg_A 13 RCSAAFNVTKGGARYFVTAGHCTNISANWS--A-SSGGSVVGVREGTSFPTNDYGIVRYTDGSS--PAGTVDLYNGSTQD 87 (187)
T ss_dssp EEECCEEEEETTEEEEEECHHHHTTCSEEE--S-STTCCEEEEEEEEECSBSCEEEEEECSSCC--CCSEEECSSSCEEE
T ss_pred cCcceEEEEECCeeEEEECcccCCCCCeEE--e-CCCceeEEEEeCccCCCCCEEEEEeCCCCC--cCceEEecCCceee
Confidence 346699997 4 59999999999888765 3 35555557777776 889999999987421 1223333
Q ss_pred -C--CCcccCCeEEEEecCCCCCCceEEEEEEeeeeccc----------------cc--CCCceeecccceEEEEEeeee
Q 036586 219 -G--DLPALQDAVTVVGYPIGGDTISVTSGVVSRMEILS----------------YV--HGSTELLGLQGKCVGIAFQSL 277 (568)
Q Consensus 219 -~--~~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~----------------~~--~ggspL~n~~G~VVGI~~~~~ 277 (568)
. ....+|+.|+++|+|.+ ++.|+|+.+++.. .. .+||||++. +++|||+++..
T Consensus 88 i~~~~~~~~G~~v~~~G~~~g-----~t~G~v~~~~~~v~~~~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~~ 161 (187)
T 1hpg_A 88 ISSAANAVVGQAIKKSGSTTK-----VTSGTVTAVNVTVNYGDGPVYNMVRTTACSAGGDSGGAHFAG-SVALGIHSGSS 161 (187)
T ss_dssp CCEECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECCCCCTTCTTCEEEET-TEEEEEEEEES
T ss_pred eccccCCCCCCEEEEEEcCCC-----EeEEEEEEeEEEEEeCCCeEeeeEEeccccCCCCCCCeEEEC-CEEEEEEEeeC
Confidence 2 24578899999999976 5778888765321 01 255699987 59999998854
Q ss_pred cCCCCccccccccchhhhHhH
Q 036586 278 KNDDVENIGYVIPTPVIIHFI 298 (568)
Q Consensus 278 ~~~~~~~~~~aIP~~~i~~~l 298 (568)
..-...+.+|++|++.+++.|
T Consensus 162 ~~~~~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 162 GCSGTAGSAIHQPVTEALSAY 182 (187)
T ss_dssp CCBTTBCCCEEEEHHHHHHHH
T ss_pred CCCCCCCceEEEEHHHHHHHc
Confidence 212334688999998776554
No 38
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.26 E-value=3.4e-11 Score=115.02 Aligned_cols=134 Identities=17% Similarity=0.196 Sum_probs=95.1
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEe-CCCCeEEEEeccCccc-cCcc-----ceecCC--
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIG-TECDIALLTVKDDEFW-EGVS-----PVEFGD-- 220 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~-~~l~-----~~~l~~-- 220 (568)
...+||++.+ +||||+||+.++..+. . .+ +++++.| +..|+||||++..... ..+. ++.|..
T Consensus 16 ~CT~Gf~~~~-~ilTa~Hc~~~~~~v~--~-~d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~ 86 (189)
T 2ea3_A 16 RCSIGFAVNG-GFITAGHCGRTGATTA--N-PT-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHT 86 (189)
T ss_dssp EEECCEEETT-EEEECGGGCCTTCEEE--T-TT-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCC
T ss_pred CCccCEEccC-eEEEchhcCCCCCEEE--e-CC-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCc
Confidence 3568999976 9999999999887653 3 24 7899999 9999999999875310 0111 334554
Q ss_pred CcccCCeEEEEecCCCCCCceEEEEEEeeeeccc------------------ccCCCceeecccceEEEEEeeeecCCCC
Q 036586 221 LPALQDAVTVVGYPIGGDTISVTSGVVSRMEILS------------------YVHGSTELLGLQGKCVGIAFQSLKNDDV 282 (568)
Q Consensus 221 ~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~------------------~~~ggspL~n~~G~VVGI~~~~~~~~~~ 282 (568)
...+|+.|..+|+|.+ ++.|+|+.+++.. ...+||||++ +|++|||++.....-..
T Consensus 87 ~~~vG~~v~~~G~~tG-----~t~G~Vs~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c~~ 160 (189)
T 2ea3_A 87 AAPVGSAVCRSGSTTG-----WHCGTITALNSSVTYPEGTVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNCRT 160 (189)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETTT
T ss_pred CCCCCCEEEEEEeCCc-----cEEEEEEecceEEEeCCccCcceEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCCCC
Confidence 3467899999999977 4667777664321 0135669996 89999999886432233
Q ss_pred ccccccccchhhhHhH
Q 036586 283 ENIGYVIPTPVIIHFI 298 (568)
Q Consensus 283 ~~~~~aIP~~~i~~~l 298 (568)
.+.+|++|++.+++.+
T Consensus 161 ~~~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 161 GGTTFFQPVNPILQAY 176 (189)
T ss_dssp EEEEEEEEHHHHHHHH
T ss_pred CCcEEEEEHHHHHHHC
Confidence 4689999987766554
No 39
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.24 E-value=2e-12 Score=137.07 Aligned_cols=138 Identities=14% Similarity=0.155 Sum_probs=53.3
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEe
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKL 413 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l 413 (568)
.|++|..|.++|||++ | |++||+|++|||+++.+|.... +..++.....+..+.|+|.|++...++.+..
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~--------~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~~ 303 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLAT--------CQGIIKGLKNQTQVKLNIVSCPPVTTVLIKR 303 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTT--------HHHHTTTCTTCSCEEEEEEECCSCC------
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHH--------HHHHHHhccCCCccccccccccccceeeEee
Confidence 3689999999999999 9 9999999999999999985422 4566666556778999999988765554432
Q ss_pred ccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEeccccccc
Q 036586 414 STHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIG 493 (568)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g 493 (568)
.... ..+|+.+. +.+|..|.+++++..
T Consensus 304 ~~~~---------------~~lG~~i~--------------------------------------~g~I~~V~~gs~A~~ 330 (388)
T 3suz_A 304 PDLK---------------YQLGFSVQ--------------------------------------NGIICSLMRGGIAER 330 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCC---------------CccceEEe--------------------------------------cCEEEEeecCCHHHH
Confidence 1100 01333211 125778888888777
Q ss_pred cccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcC
Q 036586 494 YEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 494 ~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
.|++.||+|++|||++|. +++++.++|++. ++.+.|++...
T Consensus 331 aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~-~~~v~L~V~p~ 373 (388)
T 3suz_A 331 GGVRVGHRIIEINGQSVVATAHEKIVQALSNS-VGEIHMKTMPA 373 (388)
T ss_dssp --------------------------------------------
T ss_pred cCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEec
Confidence 778899999999999997 578999999875 45667766543
No 40
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.23 E-value=2.6e-11 Score=114.72 Aligned_cols=112 Identities=17% Similarity=0.195 Sum_probs=79.4
Q ss_pred cceEEEEEEe-CCEEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEeCCCCeEEEEeccCccccCccceecCCCcccC--
Q 036586 149 SSSSSGFIVG-GRRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIGTECDIALLTVKDDEFWEGVSPVEFGDLPALQ-- 225 (568)
Q Consensus 149 ~~~GSGfiI~-~G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~~~~~~g-- 225 (568)
.+.|+||.|+ +++|||++|||.+... .|+. ++..+. +++|+..|+|++++.... ..+|.++|+.....+
T Consensus 29 ~GsGt~F~i~g~~~VvTA~HVVg~~~~-vVt~--~g~r~~---~~f~~~~D~All~i~~~~--g~~P~lKlA~~~~~G~a 100 (213)
T 3fan_A 29 MGSGGVFTIDGKIKCVTAAHVLTGNSA-RVSG--VGFNQM---LDFDVKGDFAIADCPNWQ--GVAPKAQFCEDGWTGRA 100 (213)
T ss_dssp EEEEEEEEETTEEEEEEEGGGSBTTEE-EEEE--TTEEEE---EECEEETTEEEEECTTCC--SCCCBCCBCCTTCCEEE
T ss_pred CCceEEEEECCcEEEEEeccEeCCCCE-EEec--CCcEEE---EEecCCCcEEEEEccCcC--CCCCcceeeeeeccCce
Confidence 3789999998 7899999999999888 6666 677764 478999999999996432 378999998644443
Q ss_pred CeEEEEecCCCCCCceEEEEEEee---eecccccCCCceeecccceEEEEEeeee
Q 036586 226 DAVTVVGYPIGGDTISVTSGVVSR---MEILSYVHGSTELLGLQGKCVGIAFQSL 277 (568)
Q Consensus 226 ~~V~aiG~P~g~~~~svt~GiIs~---~~~~~~~~ggspL~n~~G~VVGI~~~~~ 277 (568)
.++.+.| +..|.|.. +.......+||||+|.+|+||||+++.-
T Consensus 101 ~~~~~~g---------v~~G~i~~~~al~~T~pGdSGsPVvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 101 YWLTSSG---------VEPGVIGNGFAFCFTACGDSGSPVITEAGELVGVHTGSN 146 (213)
T ss_dssp EEEETTE---------EEEEEEETTEEEESSCCCSTTCEEEETTSCEEEEEEC--
T ss_pred EEEEccC---------ccccccccCCEEEecCCCCCCCccCCCCCcEEEEEeccC
Confidence 2333333 22343332 2223344567799999999999998844
No 41
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.23 E-value=3.1e-11 Score=115.04 Aligned_cols=132 Identities=16% Similarity=0.143 Sum_probs=95.4
Q ss_pred eEEEEEEe---CCEEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEe-CCCCeEEEEeccCccccCcc--------ceec
Q 036586 151 SSSGFIVG---GRRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIG-TECDIALLTVKDDEFWEGVS--------PVEF 218 (568)
Q Consensus 151 ~GSGfiI~---~G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~l~--------~~~l 218 (568)
.-+||++. .++||||+||+..+..+.+ +.|++++.| +..|+||||++.... ..+ ++.+
T Consensus 16 CT~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~--------~~g~v~~~~~~~~D~Alikl~~~~~--~~~~v~~~~g~~~~i 85 (186)
T 2pfe_A 16 CSIGFSVRQGSQTGFATAGHCGSTGTRVSS--------PSGTVAGSYFPGRDMGWVRITSADT--VTPLVNRYNGGTVTV 85 (186)
T ss_dssp EECCEEEEETTEEEEEECGGGCCTTCEEBT--------TTEEEEEEECSBSCEEEEEECTTSE--EEEEEECSSSCEEEC
T ss_pred EEeeEEEEcCCeeEEEEChhhCCCCCEEEE--------eeEEEEecCCCCCCEEEEEeCCCcc--cccceeccCCceEec
Confidence 45799996 3699999999998877764 567888998 999999999986531 122 2234
Q ss_pred CC--CcccCCeEEEEecCCCCCCceEEEEEEeeeeccc------------------ccCCCceeecccceEEEEEeeeec
Q 036586 219 GD--LPALQDAVTVVGYPIGGDTISVTSGVVSRMEILS------------------YVHGSTELLGLQGKCVGIAFQSLK 278 (568)
Q Consensus 219 ~~--~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~~------------------~~~ggspL~n~~G~VVGI~~~~~~ 278 (568)
.. .+.+|++|..+|++.| .+.|+|+.+++.. ..++||||+. +|++|||+++...
T Consensus 86 ~~~~~~~vG~~vc~~G~~tG-----~t~G~vs~~~~tv~~~~~~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~ 159 (186)
T 2pfe_A 86 TGSQEAATGSSVCRSGATTG-----WRCGTIQSKNQTVRYAEGTVTGLTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTG 159 (186)
T ss_dssp CBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEE
T ss_pred CCCCCCCCCCeEEEEEeCCc-----eEEEEEEEEeeeEEeCCceEeceEeccEEecCCCccCeEEE-CCEEEEEEeecCC
Confidence 33 3477899999999987 5678887765431 1135669995 8899999998643
Q ss_pred CCCCccccccccchhhhHhH
Q 036586 279 NDDVENIGYVIPTPVIIHFI 298 (568)
Q Consensus 279 ~~~~~~~~~aIP~~~i~~~l 298 (568)
.-...+.+|++|++.+++.+
T Consensus 160 ~c~~~~~~~~~pi~~~l~~~ 179 (186)
T 2pfe_A 160 DCRSGGITFFQPINPLLSYF 179 (186)
T ss_dssp ETTTEEEEEEEEHHHHHHHH
T ss_pred CCCCCCcEEEEEHHHHHHHC
Confidence 22334678999988766554
No 42
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.21 E-value=4.2e-11 Score=103.30 Aligned_cols=101 Identities=14% Similarity=0.199 Sum_probs=82.5
Q ss_pred chhhhHhHHHhhhcCccccCceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCC
Q 036586 291 TPVIIHFIQDYEKNGAYTGFPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAN 369 (568)
Q Consensus 291 ~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~ 369 (568)
.+.++++.+++.+++... +.++|+..... . | ...|+.|..+.|.|||++ ||++||+|++|||++|.+
T Consensus 4 ~~~~~~~~~~l~~~~~~~-~~~~g~~~~~~-~-------~---~~~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~ 71 (105)
T 2i4s_A 4 EDKVDAIREAIARNPQEI-FQYVRLSQVKR-D-------D---KVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTD 71 (105)
T ss_dssp HHHHHHHHHHHHHSGGGH-HHHEEEEEEEE-T-------T---EEEEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTS
T ss_pred hHHHHHHHHHHHHCHHHH-HhhceeEEEec-C-------C---cEEEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCC
Confidence 356788889999999888 89999986543 1 0 023677777888888899 999999999999999999
Q ss_pred CCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEe
Q 036586 370 DGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKL 413 (568)
Q Consensus 370 ~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l 413 (568)
+.+ +..++.....|+.+.|+|.|+|+.+++.++|
T Consensus 72 ~~d----------~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 105 (105)
T 2i4s_A 72 PNV----------MNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 105 (105)
T ss_dssp TTH----------HHHHHHHHTTCSEEEEEEEETTEEEEEEEEC
T ss_pred HHH----------HHHHHHhcCCCCeEEEEEEECCEEEEEEEeC
Confidence 988 6677777678899999999999988887764
No 43
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.21 E-value=1.5e-10 Score=131.93 Aligned_cols=172 Identities=14% Similarity=0.095 Sum_probs=108.4
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIK 412 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~ 412 (568)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++. ..|+.+.|+|.|+|+.....+.
T Consensus 183 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~~~~v~l~V~R~g~~~~~~~~ 252 (721)
T 2xkx_A 183 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHED--------AVAALK--NTYDVVYLKVAKPSNAYLSDSY 252 (721)
T ss_pred CCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCcccccCCC
Confidence 46999999999999999 9 9999999999999999875311 233443 2578999999999976433321
Q ss_pred eccCCCccc-------ccc-----C---------C-----CCCCceeeec-------EEEeeCChHHHHHHhCCCCccCc
Q 036586 413 LSTHKRLIP-------AHI-----N---------G-----RPPSYYIIAG-------FVFTAVTAPYLRSEYGKDYEFDA 459 (568)
Q Consensus 413 l~~~~~~~~-------~~~-----~---------~-----~~~~~~~~~G-------l~~~~~~~~~v~~~~~~~~~~~~ 459 (568)
..+.... .+. . . ..|......+ .....+... ...+|+.+.
T Consensus 253 --~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~l~~~--~~~lG~~i~--- 325 (721)
T 2xkx_A 253 --APPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVAKDLLGEEDIPREPRRIVIHRG--STGLGFNIV--- 325 (721)
T ss_pred --CCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcccccccccccccceEEEEEEEC--CCCccEEEe---
Confidence 1110000 000 0 0 0000000000 000000000 001222110
Q ss_pred hhhhHHHHHhhhhccCCcceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 460 PVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 460 p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
......+++|+.|.+++++...| ++.||+|++|||++|.+ ++++.++|++. ++.+.|.+.|+.
T Consensus 326 -------------~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~-~~~v~L~v~r~~ 391 (721)
T 2xkx_A 326 -------------GGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA-GQTVTIIAQYKP 391 (721)
T ss_pred -------------ccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEEEEeCc
Confidence 00123579999999998887777 78999999999999987 89999999976 577899998875
Q ss_pred E
Q 036586 537 I 537 (568)
Q Consensus 537 ~ 537 (568)
.
T Consensus 392 ~ 392 (721)
T 2xkx_A 392 E 392 (721)
T ss_pred h
Confidence 4
No 44
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.18 E-value=1e-10 Score=110.94 Aligned_cols=142 Identities=18% Similarity=0.146 Sum_probs=97.1
Q ss_pred ceEE-EEEEe---CCEEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEe-CCCCeEEEEecc-Cc-cccCccceecCC--
Q 036586 150 SSSS-GFIVG---GRRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIG-TECDIALLTVKD-DE-FWEGVSPVEFGD-- 220 (568)
Q Consensus 150 ~~GS-GfiI~---~G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d-~~~DlAlLkv~~-~~-~~~~l~~~~l~~-- 220 (568)
+.+| ||++. +++||||+|++.+...+.|.. .+... .+++.+.+ +..||||||++. .. +...++++.+..
T Consensus 12 ~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~-~~~~~-~g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~ 89 (185)
T 2qa9_E 12 GRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANS-ARTTV-LGTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAA 89 (185)
T ss_dssp CEEECCEEEEETTEEEEEECHHHHTTCSEEESST-TSCSE-EEEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEEC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCcEEecC-CCceE-eEEEeccccCCCCEEEEEecCCCccccCccceeeeCCcc
Confidence 3455 99996 469999999999988887764 34343 46677777 899999999987 32 122346667753
Q ss_pred CcccCCeEEEEecCCCCCCceEEEEEEeeeecc------c-c------------cCCCceeecccceEEEEEeeeecCCC
Q 036586 221 LPALQDAVTVVGYPIGGDTISVTSGVVSRMEIL------S-Y------------VHGSTELLGLQGKCVGIAFQSLKNDD 281 (568)
Q Consensus 221 ~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~------~-~------------~~ggspL~n~~G~VVGI~~~~~~~~~ 281 (568)
....|+.+.++|++.+ .+.|++..++.. . + .++||||++.. ++|||++.+.....
T Consensus 90 ~~~~g~~v~~~Gw~~~-----~~~g~l~~~~~~v~~~~~~~~~~~~~~~~cac~GDSGGPlv~~~-~~vGI~s~g~~~~~ 163 (185)
T 2qa9_E 90 NATVGMAVTRRGSTTG-----THSGSVTALNATVNYGGGDVVYGMIRTNVCAEPGDSGGPLYSGT-RAIGLTSGGSGNCS 163 (185)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECSTTCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEEETT
T ss_pred cCCCCCEEEEecCCCc-----eeEeEEEEEEEEEEcCCCCEEeceEEecccCCCCCccceEEECC-EEEEEEEecCCCCC
Confidence 3467899999999754 345555543210 0 0 13667999874 99999998653222
Q ss_pred CccccccccchhhhHhHH
Q 036586 282 VENIGYVIPTPVIIHFIQ 299 (568)
Q Consensus 282 ~~~~~~aIP~~~i~~~l~ 299 (568)
....+++.|+..++++++
T Consensus 164 ~~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 164 SGGTTFFQPVTEALSAYG 181 (185)
T ss_dssp TEEEEEEEEHHHHHHHHT
T ss_pred CCCcEEEEEHHHHHHhhC
Confidence 345678888887776664
No 45
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.18 E-value=6.3e-11 Score=101.26 Aligned_cols=73 Identities=22% Similarity=0.379 Sum_probs=66.1
Q ss_pred CCceEEEEecCCCcccCCCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEec
Q 036586 335 QKGVRIRRIEPTAPESHVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLS 414 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~ 414 (568)
..|++|..|.++|||+.||++||+|++|||++|.++.+ |..++.....|+.+.|+|.|+|+..++++++.
T Consensus 6 ~~Gv~V~~V~~~spA~~GL~~GD~I~~Ing~~v~~~~d----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 75 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAADVLHAGDLITEIDGNAFKSSQE----------FIDYIHSKKVGDTVKINYKHGDKNEQADIKLT 75 (100)
T ss_dssp CCCEEEEEECTTSGGGGTCCTTCEEEEETTBCCSSHHH----------HHHHHHTSCTTCEEEEEEEETTEEEEEEEECE
T ss_pred CCCEEEEEeCCCCchHHCCCCCCEEEEECCEECCCHHH----------HHHHHHhCCCCCEEEEEEEECCEEEEEEEEEe
Confidence 57999999999999988999999999999999999887 67778776689999999999999999999987
Q ss_pred cCC
Q 036586 415 THK 417 (568)
Q Consensus 415 ~~~ 417 (568)
.++
T Consensus 76 ~~~ 78 (100)
T 3i18_A 76 AID 78 (100)
T ss_dssp ECS
T ss_pred cCC
Confidence 664
No 46
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.15 E-value=2.6e-11 Score=110.12 Aligned_cols=103 Identities=17% Similarity=0.151 Sum_probs=72.2
Q ss_pred hhhcCccccCceeeEEEEEcCCHHH-HHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC--CCCccc
Q 036586 301 YEKNGAYTGFPILGVEWQKMENPDL-RISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND--GTVPFR 376 (568)
Q Consensus 301 l~~~g~~~~~~~lGi~~~~~~~~~~-~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~ 376 (568)
|.+.+++. ++++|+.+....+.+. .+.+++.....|++|..|.++|||++ ||++||+|++|||++|.+. .+
T Consensus 29 l~~~~~~~-~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~---- 103 (139)
T 2vz5_A 29 IHKLRQGE-NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQ---- 103 (139)
T ss_dssp EECEEETT-EEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----
T ss_pred EEEcCCCC-cccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHH----
Confidence 34456666 7899999875312221 23455544467999999999999999 9999999999999999853 33
Q ss_pred cCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEecc
Q 036586 377 HGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLST 415 (568)
Q Consensus 377 ~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~~ 415 (568)
+..++.. ..|+.+.|+|.|+|+...+++.+..
T Consensus 104 ------~~~~l~~-~~g~~v~l~v~R~g~~~~v~~~~~~ 135 (139)
T 2vz5_A 104 ------ARKRLTK-RSEEVVRLLVTRQSLQKAVQQSMLS 135 (139)
T ss_dssp ------HHHHHCC-TTCSEEEEEEEECC-------CCCC
T ss_pred ------HHHHHHh-CCCCEEEEEEEECCEEEEEEEeece
Confidence 4556655 5789999999999998888777654
No 47
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.11 E-value=6.3e-11 Score=100.12 Aligned_cols=73 Identities=27% Similarity=0.417 Sum_probs=65.4
Q ss_pred CCceEEEEecCCCcccCCCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEec
Q 036586 335 QKGVRIRRIEPTAPESHVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLS 414 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~ 414 (568)
..|++|..|.++|||++||++||+|++|||++|.++.+ |..++.....|+.+.|+|.|+|+.+++++++.
T Consensus 4 ~~Gv~V~~V~~~spA~~GL~~GD~Il~InG~~v~~~~~----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 73 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAGRLEAGDRIAAIDGQPINTSEQ----------IVSYVREKQAGDRVRVTFIRDRKQHEAELVLK 73 (94)
T ss_dssp CCCEECCCCCTTSTTBTTBCTTCEEEEETTBCCCCHHH----------HHHHHHHSCTTCCEEEEEEETTEEEEEEECCC
T ss_pred CCcEEEEEECCCChHHhCCCCCCEEEEECCEECCCHHH----------HHHHHHhCCCCCEEEEEEEECCEEEEEEEEEe
Confidence 56899999999999988999999999999999998877 66777776689999999999999999999887
Q ss_pred cCC
Q 036586 415 THK 417 (568)
Q Consensus 415 ~~~ 417 (568)
..+
T Consensus 74 ~~~ 76 (94)
T 2kl1_A 74 PFP 76 (94)
T ss_dssp BCS
T ss_pred eCC
Confidence 664
No 48
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.11 E-value=7.5e-11 Score=99.89 Aligned_cols=86 Identities=12% Similarity=0.131 Sum_probs=69.8
Q ss_pred eEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECC--EEEEEEEEec
Q 036586 338 VRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNS--EVHEFNIKLS 414 (568)
Q Consensus 338 v~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g--~~~~v~v~l~ 414 (568)
.+|.+|.++|||++ ||++||+|++|||++|.++.+ +...+.....++.+.|+|.|+| ...+++++|.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d----------~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~ 73 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDA----------VRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLR 73 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHH----------HHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECT
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHH----------HHHHHHHhcCCCcEEEEEEECCCCceEEEEEEcc
Confidence 46889999999999 999999999999999999988 5667766655689999999987 5688899998
Q ss_pred cCCCccccccCCCCCCceeeecEEE
Q 036586 415 THKRLIPAHINGRPPSYYIIAGFVF 439 (568)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~~~Gl~~ 439 (568)
.|+. ....++++..+||..
T Consensus 74 ~~~~------~~~~~~~l~~lGl~p 92 (95)
T 3id1_A 74 HWAF------EPDKEDPVSSLGIRP 92 (95)
T ss_dssp TCCC------CTTTSCHHHHTTEEE
T ss_pred cccc------CCCCCCHHHHcCccC
Confidence 8854 223455666777753
No 49
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.09 E-value=2e-11 Score=102.67 Aligned_cols=72 Identities=19% Similarity=0.322 Sum_probs=64.3
Q ss_pred CceEEEEecCCCcccCCCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEecc
Q 036586 336 KGVRIRRIEPTAPESHVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLST 415 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~~ 415 (568)
.|++|..|.++|||++||++||+|++|||++|.++.+ |..++....+|+.+.|+|.|+|+.+++++++..
T Consensus 1 ~Gv~V~~V~~~spA~~GL~~GD~I~~InG~~v~~~~~----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 70 (91)
T 2kjp_A 1 NGIYASSVVENMPAKGKIEVGDKIISADGKNYQSAEK----------LIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQ 70 (91)
T ss_dssp CCSSCCCCCCSSCCSSCCCSSCEEEEETTBCCSSHHH----------HHHHHSSCCSSCEECEEEESSSCEECCCEECCC
T ss_pred CceEEEEECCCChHHHcCCCCCEEEEECCEECCCHHH----------HHHHHHcCCCCCEEEEEEEECCEEEEEEEEEec
Confidence 3788999999999988999999999999999998877 667777766899999999999999999999876
Q ss_pred CC
Q 036586 416 HK 417 (568)
Q Consensus 416 ~~ 417 (568)
.+
T Consensus 71 ~~ 72 (91)
T 2kjp_A 71 FP 72 (91)
T ss_dssp CT
T ss_pred cC
Confidence 65
No 50
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.03 E-value=1.8e-10 Score=95.81 Aligned_cols=68 Identities=16% Similarity=0.281 Sum_probs=59.3
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEe
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKL 413 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l 413 (568)
.|+.|..+.|+|||++ ||++||+|++|||++|.++.+ +..++.....|+.+.|+|.|+|+..++.++|
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d----------~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 87 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNV----------MNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 87 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHH----------HHHHHHTGGGCSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHH----------HHHHHHhcCCCCEEEEEEEECCEEEEEEEEC
Confidence 4788888888888899 999999999999999999987 6677776667899999999999988877764
No 51
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.00 E-value=1.1e-10 Score=102.57 Aligned_cols=91 Identities=18% Similarity=0.224 Sum_probs=71.6
Q ss_pred hhhcCccccCcee----eEEEEEcCCHHHHHhcCCCC---CCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCC
Q 036586 301 YEKNGAYTGFPIL----GVEWQKMENPDLRISMGMRP---GQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGT 372 (568)
Q Consensus 301 l~~~g~~~~~~~l----Gi~~~~~~~~~~~~~lgl~~---~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~d 372 (568)
+.++|++. ++|+ |+.+... +. .+|+.- ...|++|..|.++|||++ ||++||+|++|||++|.++.+
T Consensus 6 ~~~~g~v~-r~~l~~~~~v~l~~~-~~----~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~ 79 (117)
T 1uit_A 6 SGGERRKD-RPYVEEPRHVKVQKG-SE----PLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATE 79 (117)
T ss_dssp CCCCCCSC-CCCSCCCEEEEEECS-SC----CCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCH
T ss_pred ccccCccc-cccCCCCEEEEEEeC-CC----CccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCH
Confidence 34678888 8999 9998776 32 334321 146899999999999999 999999999999999999876
Q ss_pred CccccCccchHHHHHhccCCCCEEEEEEEECCEEE
Q 036586 373 VPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVH 407 (568)
Q Consensus 373 l~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~ 407 (568)
+...+.....|+.+.|+|.|+++..
T Consensus 80 ----------~~~~~~~~~~g~~v~l~v~r~~~~~ 104 (117)
T 1uit_A 80 ----------QQARLIIGQQCDTITILAQYNPHVH 104 (117)
T ss_dssp ----------HHHHHHTTSCCSEEEEEECCCSCCC
T ss_pred ----------HHHHHHHHcCCCeEEEEEEECCchh
Confidence 3444444457899999999988754
No 52
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.98 E-value=2.7e-10 Score=94.96 Aligned_cols=72 Identities=14% Similarity=0.202 Sum_probs=58.7
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEc--CCCCCCccccCccchHHHH
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYL 386 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V--~~~~dl~~~~~~~~~l~~~ 386 (568)
.+++|+.+... ..|++|..|.++|||++ ||++||+|++|||++| .++.+ +..+
T Consensus 16 ~~~lG~~~~~~--------------~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~ 71 (90)
T 2eaq_A 16 SLDFGFTIKWD--------------IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKE----------WEEA 71 (90)
T ss_dssp SSCCSEEEEEE--------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHH----------HHHH
T ss_pred CCcccEEEEec--------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHH----------HHHH
Confidence 45688877543 35899999999999999 9999999999999999 66665 5566
Q ss_pred HhccCCCCEEEEEEEECCE
Q 036586 387 VSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 387 l~~~~~g~~v~l~V~R~g~ 405 (568)
+.....|+.+.|+|.|+|+
T Consensus 72 l~~~~~g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 72 MAKAQETGHLVMDVRRYGK 90 (90)
T ss_dssp HHHHHHHTEEEEEEEEEC-
T ss_pred HHhcCCCCEEEEEEEeCCC
Confidence 6654468899999999874
No 53
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=98.93 E-value=2.6e-09 Score=100.81 Aligned_cols=134 Identities=16% Similarity=0.155 Sum_probs=85.9
Q ss_pred ceEE-EEEEe---CCEEEEcccccCCCCeEEEEEcCCCcEEEEEEEEEeCCCCeEEEEeccCcccc-Cccce-----ecC
Q 036586 150 SSSS-GFIVG---GRRVLTNAHSVEHHTQVKVKKRGSDTKYLATVLSIGTECDIALLTVKDDEFWE-GVSPV-----EFG 219 (568)
Q Consensus 150 ~~GS-GfiI~---~G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~-~l~~~-----~l~ 219 (568)
+.+| ||+|. +++||||+|++.+...+.+-.. + ....+..|+||||++...... .+.++ .+.
T Consensus 12 ~~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~-~--------~~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~ 82 (181)
T 2sga_A 12 SRCSLGFNVSVNGVAHALTAGHCTNISASWSIGTR-T--------GTSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDIT 82 (181)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEETTEEE-E--------EEECSBSCEEEEEESCGGGCCCEEECSSSCEEECC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCceeecce-e--------CCcCCCCCEEEEEccCCCcccceEEecCCcceeec
Confidence 3455 99997 4699999999987766543331 1 123377899999998743111 22222 222
Q ss_pred --CCcccCCeEEEEecCCCCCCceEEEEEEeeeecc-------------------cccCCCceeecccceEEEEEeeeec
Q 036586 220 --DLPALQDAVTVVGYPIGGDTISVTSGVVSRMEIL-------------------SYVHGSTELLGLQGKCVGIAFQSLK 278 (568)
Q Consensus 220 --~~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~-------------------~~~~ggspL~n~~G~VVGI~~~~~~ 278 (568)
..+.+|+.|.++|++.+ .+.|.|+.+++. ..-++||||++.+ ++|||+++...
T Consensus 83 ~~~~~~~G~~v~~~G~~~~-----~t~G~v~~~~~~v~~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~~ 156 (181)
T 2sga_A 83 TAGNAFVGQAVQRSGSTTG-----LRSGSVTGLNATVNYGSSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALGLTSGGSG 156 (181)
T ss_dssp EECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECGGGCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEE
T ss_pred ccccCCCCCEEEEeecCCC-----ccEEEEEEeEEEEECCCCCEEeeeEecccccCCCCCCCEEEECC-EEEEEEEeeCC
Confidence 34577899999998865 344555544210 0113566999876 99999998653
Q ss_pred CCCCccccccccchhhhHhH
Q 036586 279 NDDVENIGYVIPTPVIIHFI 298 (568)
Q Consensus 279 ~~~~~~~~~aIP~~~i~~~l 298 (568)
.......+|+.|++.+++.|
T Consensus 157 ~~~~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 157 NCRTGGTTFYQPVTEALSAY 176 (181)
T ss_dssp ETTTEEEEEEEEHHHHHHHH
T ss_pred CCcCCCceEEEEHHHHHHhc
Confidence 22234578889988766655
No 54
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.89 E-value=3e-09 Score=89.72 Aligned_cols=82 Identities=16% Similarity=0.283 Sum_probs=61.6
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHh
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~ 388 (568)
.++||+.+.... .. ........|++|..|.++|||++ ||++||+|++|||++|.++.+ +..+..
T Consensus 13 ~~glG~~i~~g~-~~----~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~----------~~~~~~ 77 (97)
T 2w4f_A 13 TGGLGISIAGGK-GS----TPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEH----------HEAVEA 77 (97)
T ss_dssp TTBSSEEEEECT-TS----CCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCH----------HHHHHH
T ss_pred CCceeEEEECCc-cC----CcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCH----------HHHHHH
Confidence 467899987531 10 00011256999999999999999 999999999999999999876 333333
Q ss_pred ccCCCCEEEEEEEECCEE
Q 036586 389 QKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~~ 406 (568)
....|+.+.|+|.|+|+.
T Consensus 78 ~~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 78 LRGAGTAVQMRVWRERET 95 (97)
T ss_dssp HHTSCSEEEEEEECCSSC
T ss_pred HhCCCCeEEEEEEeCCcc
Confidence 334789999999999864
No 55
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.88 E-value=6.9e-10 Score=92.73 Aligned_cols=77 Identities=13% Similarity=0.228 Sum_probs=54.7
Q ss_pred CHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhccCCCCEEE
Q 036586 322 NPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAV 397 (568)
Q Consensus 322 ~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~~~~g~~v~ 397 (568)
++..++.||++. ..|++|..|.++|||++ | |++||+|++|||+++. ++.+ +..++.. .++.+.
T Consensus 10 ~~~~~~~~g~~~-~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~~~~v~ 76 (92)
T 3cyy_A 10 KSAKNEEYGLRL-ASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTD----------AKTLIER--SKGKLK 76 (92)
T ss_dssp CSSTTSCCCEEE-EEEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHH----------HHHHHHT--TTTEEE
T ss_pred eCCCCCCCCEEE-eCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCcEE
Confidence 555666677754 25899999999999999 9 9999999999999999 5555 4555654 345999
Q ss_pred EEEEECCEEEEEEE
Q 036586 398 VKVLRNSEVHEFNI 411 (568)
Q Consensus 398 l~V~R~g~~~~v~v 411 (568)
|+|.|+|+...+.+
T Consensus 77 l~v~r~g~~~~~~v 90 (92)
T 3cyy_A 77 MVVQRDERATLLNV 90 (92)
T ss_dssp EEEEC---------
T ss_pred EEEEeCCceeeeeC
Confidence 99999998766654
No 56
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.86 E-value=1.8e-09 Score=92.22 Aligned_cols=82 Identities=20% Similarity=0.224 Sum_probs=57.4
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCC--CCCCccccCccchHHH
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSY 385 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~ 385 (568)
++++|+.+... +...++.++++. ..|++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..
T Consensus 15 ~~~lG~~~~~~-~~~~~~~~~~~~-~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~~ 82 (103)
T 2fcf_A 15 SKSLGISIVGG-RGMGSRLSNGEV-MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQ----------AVE 82 (103)
T ss_dssp -CCCCEEEECC-CC--------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHH
T ss_pred CCceeEEEEcc-CCCCcccccCCC-CCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHH
Confidence 57899999887 555555556544 56999999999999999 9 99999999999999988 444 556
Q ss_pred HHhccCCCCEEEEEEEECCE
Q 036586 386 LVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 386 ~l~~~~~g~~v~l~V~R~g~ 405 (568)
++... ++.+.|+|.|.++
T Consensus 83 ~l~~~--~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 83 AIRKA--GNPVVFMVQSIIS 100 (103)
T ss_dssp HHHTC--CSSEEEEEECCCC
T ss_pred HHHhC--CCcEEEEEEECCC
Confidence 66554 4589999998654
No 57
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.83 E-value=1.8e-09 Score=90.08 Aligned_cols=68 Identities=21% Similarity=0.318 Sum_probs=58.2
Q ss_pred ceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEecc
Q 036586 337 GVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLST 415 (568)
Q Consensus 337 Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~~ 415 (568)
.++|..|.++|||++ ||++||+|++|||++|.++.+ +..++... .|+.+.|+|.|+|+.+++.+++..
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~----------~~~~l~~~-~g~~v~l~v~R~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVT----------FVMLVRDN-PGXSLALEIERQGSPLSLTLIPES 73 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHH----------HHHHHHHC-TTCCEEEEEEETTEEEEEEECCEE
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHH----------HHHHHhcC-CCCeEEEEEEECCeEEEEEEEEee
Confidence 367889999999999 999999999999999999877 56667664 788999999999998888877543
No 58
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.83 E-value=1.2e-09 Score=88.72 Aligned_cols=77 Identities=13% Similarity=0.211 Sum_probs=60.2
Q ss_pred eEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhc
Q 036586 314 GVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQ 389 (568)
Q Consensus 314 Gi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~ 389 (568)
|+++..+ ++..++.||+.. ..|++|..|.++|||++ | |++||+|++|||+++. ++.+ +..++..
T Consensus 1 G~~~~~~-~~~~~~~~g~~~-~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~~~l~~ 68 (81)
T 2rcz_A 1 GSKVTLV-KSRKNEEYGLRL-ASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTD----------AKTLIER 68 (81)
T ss_dssp CEEEEEE-CCSTTCCCCEEE-EEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHH----------HHHHHHT
T ss_pred CeEEEEE-ECCCCCCCCEEE-eCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHC
Confidence 5666677 677777788764 36899999999999999 9 9999999999999999 5554 4556654
Q ss_pred cCCCCEEEEEEEECC
Q 036586 390 KYTGDSAVVKVLRNS 404 (568)
Q Consensus 390 ~~~g~~v~l~V~R~g 404 (568)
. ++.+.|+|.|+|
T Consensus 69 ~--~~~v~l~v~R~g 81 (81)
T 2rcz_A 69 S--KGKLKMVVQRDE 81 (81)
T ss_dssp S--TTEEEEEEEC--
T ss_pred C--CCeEEEEEEeCC
Confidence 3 458999999875
No 59
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.82 E-value=7.7e-09 Score=87.98 Aligned_cols=75 Identities=15% Similarity=0.127 Sum_probs=60.1
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHh
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~ 388 (568)
.+++|+.+... .. ...|++|..|.++|||++ ||++||+|++|||++|.++. +.+++.
T Consensus 21 ~~~lG~~~~~~-~~----------~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-----------~~~~~~ 78 (100)
T 2eeh_A 21 AGRLGFSVRGG-SE----------HGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTT-----------MGSAVK 78 (100)
T ss_dssp SSSCSEEEECC-TT----------TTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCC-----------HHHHHH
T ss_pred CCCccEEEEcc-cc----------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-----------HHHHHH
Confidence 56899999775 21 135899999999999999 99999999999999999864 234444
Q ss_pred ccCCCCEEEEEEEECCEE
Q 036586 389 QKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~~ 406 (568)
....++.+.|+|.|+|+.
T Consensus 79 ~~~~~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 79 VLTSSSRLHMMVRRMGSG 96 (100)
T ss_dssp HHHSCSSEEEEEEECSCC
T ss_pred hhcCCCEEEEEEEECCcC
Confidence 444588999999999863
No 60
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.82 E-value=6.3e-09 Score=90.07 Aligned_cols=82 Identities=16% Similarity=0.275 Sum_probs=61.3
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHh
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~ 388 (568)
+.+||+.+..-... ..+.....|++|..|.++|||++ ||++||+|++|||++|.+..+ +..+..
T Consensus 25 ~~glG~~i~~g~~~-----~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~----------~~~~~~ 89 (110)
T 1x5q_A 25 TGGLGISIAGGKGS-----TPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEH----------HEAVEA 89 (110)
T ss_dssp SSSCSEEEEECTTS-----CCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCH----------HHHHHH
T ss_pred CCeeeEEEEccccC-----CccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCH----------HHHHHH
Confidence 46789998753110 01112356999999999999999 999999999999999998765 223332
Q ss_pred ccCCCCEEEEEEEECCEE
Q 036586 389 QKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~~ 406 (568)
....|+.+.|+|.|+|+.
T Consensus 90 ~~~~g~~v~l~v~R~g~~ 107 (110)
T 1x5q_A 90 LRGAGTAVQMRVWRESGP 107 (110)
T ss_dssp HHSCCSEEEEEEEECSSC
T ss_pred hhCCCCeEEEEEEECCcc
Confidence 233789999999999875
No 61
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.82 E-value=7.5e-09 Score=88.51 Aligned_cols=83 Identities=18% Similarity=0.202 Sum_probs=61.3
Q ss_pred CceeeEEEEEcCCHHHHH-hcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCC--CCccccCccchHHH
Q 036586 310 FPILGVEWQKMENPDLRI-SMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSY 385 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~-~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~--dl~~~~~~~~~l~~ 385 (568)
++++|+.+..-.+...+. .++......|++|..|.++|||++ ||++||+|++|||++|.+.. + +..
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~ 87 (104)
T 3sfj_A 18 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQ----------ARK 87 (104)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHH
T ss_pred CCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHH
Confidence 568999998331322222 233223367999999999999999 99999999999999998765 4 444
Q ss_pred HHhccCCCCEEEEEEEEC
Q 036586 386 LVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 386 ~l~~~~~g~~v~l~V~R~ 403 (568)
++.. ..|+.+.|+|.|+
T Consensus 88 ~l~~-~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 88 RLTK-RSEEVVRLLVTRQ 104 (104)
T ss_dssp HHTC-TTCSEEEEEEEEC
T ss_pred HHHh-CCCCEEEEEEEcC
Confidence 5544 4788999999884
No 62
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.80 E-value=3.6e-09 Score=88.27 Aligned_cols=62 Identities=19% Similarity=0.258 Sum_probs=52.6
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVH 407 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~ 407 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .|+.+.|+|.|+|+..
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLE--------AQNRIKG--CTDNLTLTVARSEHES 89 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHH--------HHHHHHT--CSSEEEEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECCccc
Confidence 4899999999999999 99999999999999999988211 4455554 7899999999998753
No 63
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.77 E-value=7.9e-09 Score=91.62 Aligned_cols=82 Identities=20% Similarity=0.224 Sum_probs=59.9
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCC--CCCCccccCccchHHH
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSY 385 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~ 385 (568)
++++|+.+... ....++.++++. ..|++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..
T Consensus 35 ~~~lGi~v~~~-~~~~~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~----------~~~ 102 (123)
T 2iwq_A 35 SKSLGISIVGG-RGMGSRLSNGEV-MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQ----------AVE 102 (123)
T ss_dssp TSCCSEEEEEC-C---------CC-CCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHH
T ss_pred CCCccEEEEec-cCccccccccCC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHH
Confidence 57899999887 665555555544 56999999999999999 9 99999999999999988 444 455
Q ss_pred HHhccCCCCEEEEEEEECCE
Q 036586 386 LVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 386 ~l~~~~~g~~v~l~V~R~g~ 405 (568)
++... ++.+.|+|.|...
T Consensus 103 ~l~~~--~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 103 AIRKA--GNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHC--CSSEEEEEECCCC
T ss_pred HHHcC--CCeEEEEEEECCc
Confidence 66543 5689999988653
No 64
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=2e-09 Score=95.43 Aligned_cols=79 Identities=18% Similarity=0.255 Sum_probs=64.4
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHh
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~ 388 (568)
.+||+.+... +.. ....|++|..|.++|||++ | |++||+|++|||++|.++.+ +..++.
T Consensus 32 ~~lG~~~~~~-~~~--------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~----------~~~~l~ 92 (124)
T 1wh1_A 32 DKLGLTVCYR-TDD--------EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREE----------AVALLT 92 (124)
T ss_dssp CCCCEEEECC-CCC--------SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHH----------HHHHHT
T ss_pred CcccEEEEec-CCC--------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHH----------HHHHHH
Confidence 4699999877 322 0136999999999999999 9 99999999999999998776 567776
Q ss_pred ccCCCCEEEEEEEECCEEEEE
Q 036586 389 QKYTGDSAVVKVLRNSEVHEF 409 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~~~~v 409 (568)
. ..|+.+.|+|.|+|+.+..
T Consensus 93 ~-~~g~~v~l~v~R~g~~~~~ 112 (124)
T 1wh1_A 93 S-EENKNFSLLIARPELQLDE 112 (124)
T ss_dssp C-SSCCSCCEEEEECSSCCCC
T ss_pred h-CCCCEEEEEEEECCEEeec
Confidence 6 4688999999999976443
No 65
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.74 E-value=2.9e-08 Score=110.57 Aligned_cols=79 Identities=14% Similarity=0.337 Sum_probs=67.6
Q ss_pred hcCCCC--CCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECC
Q 036586 328 SMGMRP--GQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNS 404 (568)
Q Consensus 328 ~lgl~~--~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g 404 (568)
.+|+.. +..|++|..|.++|||++ ||++||+|++|||++| +..+ |.+++....+|++|.|+|.|+|
T Consensus 486 ~lG~~~~~~~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~----------l~~~l~~~~~g~~v~l~v~R~g 554 (597)
T 4fgm_A 486 NFGAKYKASPQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQS----------VKRILERYIPGDTVTIHAFRRD 554 (597)
T ss_dssp CCSEEEEEETTEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTT----------HHHHHTTCCTTCEEEEEEEETT
T ss_pred ccceEEeccCCeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHH----------HHHHHHhcCCCCEEEEEEEECC
Confidence 455532 245899999999999999 9999999999999999 5666 7788887778999999999999
Q ss_pred EEEEEEEEeccCC
Q 036586 405 EVHEFNIKLSTHK 417 (568)
Q Consensus 405 ~~~~v~v~l~~~~ 417 (568)
+.++++|++...+
T Consensus 555 ~~~~~~v~l~~~~ 567 (597)
T 4fgm_A 555 ELMTLELTWQEPA 567 (597)
T ss_dssp EEEEEEEECCCCC
T ss_pred EEEEEEEEecCCC
Confidence 9999999987654
No 66
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.73 E-value=1.3e-08 Score=88.24 Aligned_cols=83 Identities=17% Similarity=0.177 Sum_probs=66.4
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CC-CCCCEEEEECCEEcCC--CCCCccccCccchHHHH
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VL-KPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 386 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL-~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~ 386 (568)
..+|+.+... . ...|++|..|.++|||++ || ++||+|++|||+++.+ +.+ +..+
T Consensus 13 ~glG~~~~~~-~-----------~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~----------~~~~ 70 (112)
T 1qau_A 13 GGLGFLVKER-V-----------SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDS----------ALEV 70 (112)
T ss_dssp TBTSEEEEEC-S-----------SSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHH----------HHHH
T ss_pred CceeEEEEec-C-----------CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 4588887665 1 135899999999999999 98 9999999999999998 444 5566
Q ss_pred HhccCCCCEEEEEEEECCEEEEEEEEeccC
Q 036586 387 VSQKYTGDSAVVKVLRNSEVHEFNIKLSTH 416 (568)
Q Consensus 387 l~~~~~g~~v~l~V~R~g~~~~v~v~l~~~ 416 (568)
+.. ..|+.+.|+|.|+|+...+++.....
T Consensus 71 l~~-~~g~~v~l~v~R~g~~~~~~~~~~~~ 99 (112)
T 1qau_A 71 LRG-IASETHVVLILRGPEGFTTHLETTFT 99 (112)
T ss_dssp HHH-SCSSSEEEEEEECCTTSEEEEEEEEC
T ss_pred HHh-CCCCcEEEEEEeCCcccceEeeeecc
Confidence 655 46889999999999887777775443
No 67
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.73 E-value=2.9e-08 Score=83.25 Aligned_cols=59 Identities=19% Similarity=0.300 Sum_probs=50.7
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++.+ + +++.....|+.+.|+|.|++.
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~----------~-~~~~~~~~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSH----------L-EVVKLIKSGAYVALTLLGSSS 88 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCH----------H-HHHHHHTSSSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCH----------H-HHHHhhcCCCEEEEEEEECCC
Confidence 5899999999999999 999999999999999998765 2 345555579999999999764
No 68
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.71 E-value=1.7e-08 Score=97.77 Aligned_cols=85 Identities=16% Similarity=0.214 Sum_probs=68.5
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCC-CCEEEEECCEEcCCCCCCccccCccchHHHHH
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKP-SDIILSFDGIDIANDGTVPFRHGERIGFSYLV 387 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~-GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l 387 (568)
++++|+.+..+ ++..++ ..|++|..|.++|||++ ||++ ||+|++|||+ |.++.+ |..++
T Consensus 94 ~~~lGi~~~~~-~~~~~~-------~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~----------l~~~l 154 (209)
T 3rle_A 94 QGLLGVSIRFC-SFDGAN-------ENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESED----------LFSLI 154 (209)
T ss_dssp SSSSCEEEEEE-ECTTGG-------GSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSC----------HHHHH
T ss_pred cCccceEEeec-ChhHcc-------ccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHH----------HHHHH
Confidence 57899999887 544332 25899999999999999 9999 9999999998 999988 67888
Q ss_pred hccCCCCEEEEEEEECCEEEEEEEEec
Q 036586 388 SQKYTGDSAVVKVLRNSEVHEFNIKLS 414 (568)
Q Consensus 388 ~~~~~g~~v~l~V~R~g~~~~v~v~l~ 414 (568)
... .|+.+.|+|+|++....+++++.
T Consensus 155 ~~~-~g~~v~l~v~r~~~~~~~~v~l~ 180 (209)
T 3rle_A 155 ETH-EAKPLKLYVYNTDTDNCREVIIT 180 (209)
T ss_dssp HHT-TTSCEEEEEEETTTTEEEEEEEC
T ss_pred HhC-CCCeEEEEEEECCceEEEEEEEE
Confidence 776 88999999999764333444443
No 69
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.70 E-value=5.7e-09 Score=87.97 Aligned_cols=75 Identities=12% Similarity=0.229 Sum_probs=58.4
Q ss_pred eeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHh
Q 036586 312 ILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 312 ~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~ 388 (568)
.+|+.+... . |++. ..|++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++.
T Consensus 15 ~~G~~l~~~-~-------~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~ 75 (96)
T 2v90_A 15 GFGFLLREE-K-------GLDG-RPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEE----------TVSRIQ 75 (96)
T ss_dssp BSCEEEEEE-E-------CTTS-CEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHH----------HHHHHH
T ss_pred cccEEEEec-c-------CCCC-CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHH
Confidence 478877654 1 2222 45899999999999999 9999999999999999984 33 445555
Q ss_pred ccCCCCEEEEEEEECCEEE
Q 036586 389 QKYTGDSAVVKVLRNSEVH 407 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~~~ 407 (568)
. .|+.+.|+|.|+|+..
T Consensus 76 ~--~g~~v~l~v~r~~~~~ 92 (96)
T 2v90_A 76 G--QGSCVSLTVVDPEADR 92 (96)
T ss_dssp T--TTTEEEEEEECCCTTS
T ss_pred c--CCCEEEEEEECCCCcc
Confidence 4 3899999999988653
No 70
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.67 E-value=4.5e-08 Score=84.69 Aligned_cols=80 Identities=19% Similarity=0.304 Sum_probs=59.9
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHh
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~ 388 (568)
..+|+.+... ... . ....|++|..|.++|||++ | |++||+|++|||++|.++..- .+..++.
T Consensus 22 ~glG~~~~~~-~~~----~---~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~--------~~~~~l~ 85 (111)
T 2koj_A 22 EGLGFSITSR-DVT----I---GGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQE--------EVVSLLR 85 (111)
T ss_dssp TBTCEEEEEC-SCS----S---SSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHH--------HHHHHHH
T ss_pred CccCEEEEec-cCC----C---CCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH
Confidence 3488888765 111 0 1135899999999999999 9 999999999999999875310 1445666
Q ss_pred ccCCCCEEEEEEEECCEE
Q 036586 389 QKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~~ 406 (568)
....|+.+.|+|.|+|+.
T Consensus 86 ~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 86 STKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp HCCCSSEEEEEEEECCCC
T ss_pred hCCCCCeEEEEEEeCCCC
Confidence 555689999999998863
No 71
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.66 E-value=2.7e-08 Score=88.29 Aligned_cols=62 Identities=16% Similarity=0.292 Sum_probs=53.5
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++.....|+.+.|+|.|+++.
T Consensus 50 ~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~----------~~~~l~~~~~g~~v~l~v~R~~~~ 114 (124)
T 3tsv_A 50 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREE----------AVLFLLDLPKGEEVTILAQKKKDV 114 (124)
T ss_dssp TSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHH----------HHHHHHHSCTTCEEEEEEEECHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhcCCCCEEEEEEEECCch
Confidence 35899999999999999 9999999999999999998 54 455666656899999999998753
No 72
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=2.6e-08 Score=84.79 Aligned_cols=73 Identities=18% Similarity=0.172 Sum_probs=58.8
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhc
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 389 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~ 389 (568)
..+|+.+... .. ...|++|..|.++|||++ ||++||+|++|||++|.++.+ ..++..
T Consensus 21 ~~lG~~~~~~-~~----------~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~-----------~~~~~~ 78 (101)
T 1uez_A 21 EGLGFSIRGG-SE----------HGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTH-----------AEAVKA 78 (101)
T ss_dssp TCSSEEEEEC-TT----------TTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCH-----------HHHHHH
T ss_pred CcccEEEeCC-CC----------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCH-----------HHHHHh
Confidence 4578888765 21 135899999999999999 999999999999999999875 234555
Q ss_pred cCCCCEEEEEEEECCE
Q 036586 390 KYTGDSAVVKVLRNSE 405 (568)
Q Consensus 390 ~~~g~~v~l~V~R~g~ 405 (568)
...++.+.|+|.|+|+
T Consensus 79 ~~~~~~v~l~v~R~g~ 94 (101)
T 1uez_A 79 LKGSKKLVLSVYSAGR 94 (101)
T ss_dssp SSSSSSCCEEECCCCC
T ss_pred hcCCCeEEEEEEECCc
Confidence 5567789999999876
No 73
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.64 E-value=5.8e-09 Score=91.87 Aligned_cols=61 Identities=13% Similarity=0.303 Sum_probs=53.5
Q ss_pred CCceEEEEecC--CCcccC-CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHhccCCCCEEEEEEEECCEEE
Q 036586 335 QKGVRIRRIEP--TAPESH-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVH 407 (568)
Q Consensus 335 ~~Gv~V~~V~p--~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~ 407 (568)
..|++|..|.+ ++||++ ||++||+|++|||++|.++ .+ |..++... |+.+.|+|.|+|+..
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~d----------l~~~l~~~--g~~v~l~v~R~g~~~ 108 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEE----------VEDAIKQT--SQTLQLLIEHDPVPQ 108 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHH----------HHHHHHCC--SSCEEEEEEECSSCC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHH----------HHHHHHhC--CCEEEEEEEECCEEE
Confidence 46999999999 999999 9999999999999999998 66 55666654 889999999998764
No 74
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.64 E-value=1.1e-08 Score=85.36 Aligned_cols=61 Identities=15% Similarity=0.281 Sum_probs=46.8
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVH 407 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~ 407 (568)
..|++|..|.++|||++ ||++||+|++|||++|. ++.+ +..++... |+.+.|+|.|+++..
T Consensus 26 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~--g~~v~l~v~r~~~~~ 89 (91)
T 2vsp_A 26 LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEK----------VVDRIQSS--GKNVTLLVCGKKAQD 89 (91)
T ss_dssp CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHH----------HHHHHTTS--CSEEEEEEEC-----
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcC--CCEEEEEEEeCCccc
Confidence 35899999999999999 99999999999999998 4444 45556543 899999999988653
No 75
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.62 E-value=7.1e-08 Score=82.85 Aligned_cols=62 Identities=15% Similarity=0.228 Sum_probs=52.6
Q ss_pred CCceEEEEecCCCcccCCCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESHVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.++|||+.||++||+|++|||++|.++.+ +..++.....|+.+.|+|.|+|+.
T Consensus 38 ~~gv~V~~V~~~spA~agl~~GD~I~~vng~~v~~~~~----------~~~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEH----------AFAVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CCCEEEEEECTTSTTBTTBCTTCEEEEETTEECTTCCH----------HHHHHHHHTCCSEEEEEEEEESCC
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEECCCccH----------HHHHHHhhCCCCEEEEEEEECCCC
Confidence 45899999999999988999999999999999999876 344444445789999999998764
No 76
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.62 E-value=2.8e-08 Score=88.40 Aligned_cols=100 Identities=17% Similarity=0.254 Sum_probs=75.9
Q ss_pred cCCCCEEEEEEEECCEEEEEEEEeccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHh
Q 036586 390 KYTGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLH 469 (568)
Q Consensus 390 ~~~g~~v~l~V~R~g~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~ 469 (568)
..+|+++.++|+|+|+.+++++++.... .+||.+.... .++
T Consensus 5 ~~~g~~v~l~v~R~g~~~~v~v~~~~~~----------------~lG~~~~~~~------~~~----------------- 45 (128)
T 1uf1_A 5 SSGDRRSTLHLLQGGDEKKVNLVLGDGR----------------SLGLTIRGGA------EYG----------------- 45 (128)
T ss_dssp CSTTTSCCSCCCCCSSEEEEEEECCSSC----------------CCCEEEECCT------TTT-----------------
T ss_pred CCCCCEEEEEEEeCCcEEEEEEEECCCC----------------ccCEEEECcc------cCC-----------------
Confidence 3578899999999999999999875321 3577765521 111
Q ss_pred hhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCCHH--HHHHHHHccCCCeEEEEEEcCeEE
Q 036586 470 AMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLK--SLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 470 ~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~--~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
.+++|..|.+++++...+++.||+|++|||++|.++. ++.+.++. ++.+.|.+.|++..
T Consensus 46 --------~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~v~l~v~R~g~~ 106 (128)
T 1uf1_A 46 --------LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS--SRHLILTVKDVGRL 106 (128)
T ss_dssp --------CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT--CSEEEEEEECCSCC
T ss_pred --------CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCeEEEEEEECCcc
Confidence 2488999999988877778899999999999999964 45555554 46899999998763
No 77
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.62 E-value=3.8e-08 Score=83.12 Aligned_cols=61 Identities=25% Similarity=0.342 Sum_probs=49.7
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .|+.+.|+|.|+|+
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQA--------VIDLIKE--ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--SCSEEEEEEEEC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc--CCCeEEEEEEeCCC
Confidence 45899999999999999 9 9999999999999999874311 4455554 68999999999874
No 78
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.62 E-value=6.7e-08 Score=81.16 Aligned_cols=72 Identities=17% Similarity=0.280 Sum_probs=55.4
Q ss_pred eeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhc
Q 036586 312 ILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 389 (568)
Q Consensus 312 ~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~ 389 (568)
.+|+.+... . ...|++|..|.++|||++ | |++||+|++|||++|.+..... ...++.
T Consensus 17 ~lG~~~~~~-~-----------~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~- 75 (95)
T 2vwr_A 17 QLGIKLVRR-T-----------DEPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPEL--------AAQIIQ- 75 (95)
T ss_dssp CCCEEEEEC-S-----------SSCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHH-
T ss_pred cccEEEEec-c-----------CCCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH-
Confidence 378887654 1 135899999999999999 9 9999999999999998865411 122232
Q ss_pred cCCCCEEEEEEEECCE
Q 036586 390 KYTGDSAVVKVLRNSE 405 (568)
Q Consensus 390 ~~~g~~v~l~V~R~g~ 405 (568)
..|+.+.|+|.|+++
T Consensus 76 -~~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 76 -ASGERVNLTIARPGK 90 (95)
T ss_dssp -HCCSEEEEEEEEESC
T ss_pred -cCCCEEEEEEEcCCc
Confidence 358999999999875
No 79
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.61 E-value=6.5e-08 Score=85.32 Aligned_cols=78 Identities=17% Similarity=0.279 Sum_probs=58.0
Q ss_pred eeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhc
Q 036586 312 ILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 389 (568)
Q Consensus 312 ~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~ 389 (568)
.+|+.+... ... .....|++|..|.++|||++ | |++||+|++|||++|.++..- .+..++..
T Consensus 42 ~lG~~l~~~-~~~-------~~g~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~--------~~~~~l~~ 105 (121)
T 2kom_A 42 GLGFSITSR-DVT-------IGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQE--------EVVSLLRS 105 (121)
T ss_dssp CCCEEEECC-CCS-------SSSSCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHH--------HHHHHHHH
T ss_pred cEeEEEEec-cCC-------cCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHH--------HHHHHHhc
Confidence 368887654 110 01135899999999999999 9 999999999999999885210 14455665
Q ss_pred cCCCCEEEEEEEECCE
Q 036586 390 KYTGDSAVVKVLRNSE 405 (568)
Q Consensus 390 ~~~g~~v~l~V~R~g~ 405 (568)
...|+.+.|+|.|+|+
T Consensus 106 ~~~g~~v~l~v~R~g~ 121 (121)
T 2kom_A 106 TKMEGTVSLLVFRQED 121 (121)
T ss_dssp CCSSCEEEEEEEECCC
T ss_pred CCCCCEEEEEEEeCCC
Confidence 5568999999999874
No 80
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.61 E-value=1.8e-07 Score=84.01 Aligned_cols=86 Identities=8% Similarity=-0.067 Sum_probs=69.7
Q ss_pred eeecEEEeeCCh--HHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEec
Q 036586 433 IIAGFVFTAVTA--PYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPV 510 (568)
Q Consensus 433 ~~~Gl~~~~~~~--~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV 510 (568)
.|+|+.++.+.. +.+.+.+|++. ....+++|..|.+++++. .+++.||+|++|||++|
T Consensus 29 ~~LGv~~~~~~~~~~~~~~~lgl~~-------------------~~~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v 88 (134)
T 2l97_A 29 PALGIQMVNLSNVSTSDIRRLNIPS-------------------NVTSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEI 88 (134)
T ss_dssp CCCCCEEEESSSSCHHHHHHHSSCS-------------------SSCSCEEEEECSTTSGGG-TTSCSSCEEEEETTEEC
T ss_pred eEeeEEEEECCchhHHHHHHcCCCc-------------------CCCCCEEEEEECCCCchH-HCCCCCCEEEEECCEEc
Confidence 379999988773 13444566431 123678999999998888 88889999999999999
Q ss_pred CCHHHHHHHHHcc-CCCeEEEEEEcCeEE
Q 036586 511 QNLKSLADMVESS-EDEFLKFDLEYQQIV 538 (568)
Q Consensus 511 ~~l~~f~~~l~~~-~~~~v~l~v~R~~~~ 538 (568)
.++.+|.++|... +++.+.|++.|+|+.
T Consensus 89 ~~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 117 (134)
T 2l97_A 89 ASSTDLQSALYNHSIGDTIKITYYRNGKE 117 (134)
T ss_dssp CCHHHHHHHHHHSSTTCEEEEEEEETTEE
T ss_pred CCHHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 9999999999987 577999999999864
No 81
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=1.5e-08 Score=90.20 Aligned_cols=70 Identities=17% Similarity=0.170 Sum_probs=58.5
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEec
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLS 414 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~ 414 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++.+ .+++.....++.+.|+|.|+|+...+++++.
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~-----------~~~~~~~~~~~~v~l~v~R~g~~~~~~v~~~ 114 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILH-----------DEAVRLLKSSRHLILTVKDVGRLPHARTTVD 114 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCH-----------HHHHHHHTTCSEEEEEEECCSCCSSCSCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCH-----------HHHHHHHhcCCeEEEEEEECCcccccccccc
Confidence 4899999999999999 999999999999999998754 2455555567899999999999877776665
Q ss_pred cC
Q 036586 415 TH 416 (568)
Q Consensus 415 ~~ 416 (568)
..
T Consensus 115 ~~ 116 (128)
T 1uf1_A 115 ET 116 (128)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 82
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.60 E-value=2.9e-08 Score=81.96 Aligned_cols=58 Identities=14% Similarity=0.227 Sum_probs=49.7
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++.... +.+.|+|.|+|+
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~~--~~v~l~v~R~~~ 86 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAE----------AQSKIRQSP--SPLRLQLDRITS 86 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHH----------HHHHHHTCC--SSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcCC--CeEEEEEEecCC
Confidence 4899999999999999 9999999999999999984 44 556666542 789999999875
No 83
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.60 E-value=1.8e-08 Score=85.05 Aligned_cols=60 Identities=25% Similarity=0.416 Sum_probs=51.5
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCC--CCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..++.. .|+.+.|+|.|+++.
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~g~~v~l~v~R~~~~ 94 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAE----------AMSILKQ--CGQEAALLIEYDVSE 94 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH----------HHHHHHH--SCSEEEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCeEEEEEEeCCCc
Confidence 45899999999999999 9 99999999999999998 444 4556655 789999999998864
No 84
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.60 E-value=4.4e-08 Score=81.04 Aligned_cols=60 Identities=17% Similarity=0.251 Sum_probs=49.0
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.+++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .|+.+.|+|.|+|.
T Consensus 27 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLE--------AQNKIKG--CTGSLNMTLQRESD 87 (88)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHH--------HHHHHHT--CCSEEEEEEECCCC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEeCCC
Confidence 4799999999999999 99999999999999999884210 3344443 38899999999874
No 85
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=98.60 E-value=4.4e-07 Score=86.31 Aligned_cols=139 Identities=15% Similarity=0.131 Sum_probs=89.0
Q ss_pred ceEEEEEEe---CCEEEEcccccCCCC-eEEEEEcCCCcEEE-----EEEEEEeCCCCeEEEEeccCcccc--Cccceec
Q 036586 150 SSSSGFIVG---GRRVLTNAHSVEHHT-QVKVKKRGSDTKYL-----ATVLSIGTECDIALLTVKDDEFWE--GVSPVEF 218 (568)
Q Consensus 150 ~~GSGfiI~---~G~ILTn~HVV~~~~-~i~V~~~~dg~~~~-----a~vv~~d~~~DlAlLkv~~~~~~~--~l~~~~l 218 (568)
-.|+|++|. ..+|||++||+.... .+... .++..++ ..+-..|+..|||||++++.. +. ...++.|
T Consensus 27 h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~~~~~--k~g~~ip~~~~~~~~~~~d~~~D~all~vp~~~-~s~lg~~~a~~ 103 (191)
T 1zyo_A 27 TIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLA--KAGKQVSVEDWEISMSSSDKMLDFAIVRVPTHV-WSKLGVKSTPL 103 (191)
T ss_dssp EEEEEEEEEC--CEEEEECHHHHTSSSCCCEEE--ETTEEEECCSCEEEEEECCTTTCEEEEECCHHH-HHHHTCCCCCB
T ss_pred EEEEEEEEEECCCcEEEEChhhCcCCcceeeec--CCCCEEEcccceeeEccCCCCCcEEEEEcCCCh-hhhcCcceeEe
Confidence 468888885 459999999998753 23333 2565554 344445678999999998542 10 2445455
Q ss_pred CCCcccCCeEEEEecCCCCCCceEEEEEEeeee--------ccc-ccCCCceeecccceEEEEEeeeecCCCCccccccc
Q 036586 219 GDLPALQDAVTVVGYPIGGDTISVTSGVVSRME--------ILS-YVHGSTELLGLQGKCVGIAFQSLKNDDVENIGYVI 289 (568)
Q Consensus 219 ~~~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~--------~~~-~~~ggspL~n~~G~VVGI~~~~~~~~~~~~~~~aI 289 (568)
... ..++.|.++|+|..... ....|+....+ ... ...+|+|++|.+ .||||....- +..+.|.|+
T Consensus 104 ~~~-~~~~~vt~yg~~~~~~~-~s~~g~~~~~~~~~~~~~~~~T~~G~SGsP~~ng~-~IVGvh~G~~---~~~~~N~a~ 177 (191)
T 1zyo_A 104 VCP-SSKDVITCYGGSSSDCL-MSGVGSSSTSEFTWKLTHTCPTAAGWSGTPLYSSR-GVVGMHVGFE---EIGKLNRGV 177 (191)
T ss_dssp CCC-CSCEEEEEEEESSTTSE-EEEEEEEEECSSTTEEEECCCCCTTCTTCEEECSS-CEEEEEEEEE---ETTTEEEEE
T ss_pred ecC-CCCccEEEEeecCCCCE-eecccceeeccCCcEEEEEcCCCCCCCCCcEEcCC-eEEEEEeCcc---cCCceeeee
Confidence 332 35799999999876443 45567442211 111 113566999975 7889998843 235677788
Q ss_pred cchhhhHh
Q 036586 290 PTPVIIHF 297 (568)
Q Consensus 290 P~~~i~~~ 297 (568)
-+..++.+
T Consensus 178 n~~~~~~~ 185 (191)
T 1zyo_A 178 NMFYVANY 185 (191)
T ss_dssp CHHHHHHH
T ss_pred ehHHHhhh
Confidence 77777765
No 86
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.60 E-value=7.4e-08 Score=85.62 Aligned_cols=67 Identities=27% Similarity=0.448 Sum_probs=57.4
Q ss_pred CCceEEEEecCCCcccCCCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEec
Q 036586 335 QKGVRIRRIEPTAPESHVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLS 414 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~ 414 (568)
..|++|..|.++|||++.|++||+|++|||++|.++.+ |..++.....|+.+.|+| |+|+ +++++.
T Consensus 24 ~~gv~V~~V~~~spA~~aL~~GD~Il~InG~~v~~~~d----------l~~~l~~~~~g~~v~l~V-R~g~---~~v~l~ 89 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKVLTPGLVIESINGMPTSNLTT----------YSAALKTISVGEVINITT-DQGT---FHLKTG 89 (125)
T ss_dssp CCCEEEEEECSSSGGGGTSCTTCEEEEETTEECSSHHH----------HHHHHTTCCTTCEEEEEE-TTEE---EEEECC
T ss_pred CCceEEEEECCCChHHHhcCCCCEEEEECCEEcCCHHH----------HHHHHHhcCCCCEEEEEE-ECCE---EEEEEe
Confidence 56899999999999877799999999999999999887 667777656789999999 9987 666665
Q ss_pred c
Q 036586 415 T 415 (568)
Q Consensus 415 ~ 415 (568)
.
T Consensus 90 ~ 90 (125)
T 2hga_A 90 R 90 (125)
T ss_dssp B
T ss_pred c
Confidence 4
No 87
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.59 E-value=7.6e-08 Score=82.83 Aligned_cols=70 Identities=16% Similarity=0.184 Sum_probs=53.4
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE-EEEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE-VHEFNI 411 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~-~~~v~v 411 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++. ..++.+.|+|.|+++ ...+++
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~~~~v~l~v~R~~~~~~~~~v 100 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEE--------AVTALK--NTSDFVYLKVAKPGSGEKIMEI 100 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHHH--SCCSEEEEEEECCSSSCSEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHh--CCCCeEEEEEEeCCCCCeEEEE
Confidence 45899999999999999 9 9999999999999998754311 223332 357899999999875 344555
Q ss_pred Eec
Q 036586 412 KLS 414 (568)
Q Consensus 412 ~l~ 414 (568)
++.
T Consensus 101 ~l~ 103 (106)
T 4amh_A 101 KLI 103 (106)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 88
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.59 E-value=5.6e-08 Score=83.32 Aligned_cols=69 Identities=12% Similarity=0.113 Sum_probs=49.3
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIK 412 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~ 412 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++. ..|+.+.|+|.|+++...+.++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~~~~~~~~ 101 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEE--------AVTALK--NTSDFVYLKVAKPTSMYISRHH 101 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHH--------HHHHHH--SCCSEEEEEEECCCC-------
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEcCCCCCCcccc
Confidence 35899999999999999 9 9999999999999998754311 122232 3578999999999987766654
Q ss_pred e
Q 036586 413 L 413 (568)
Q Consensus 413 l 413 (568)
-
T Consensus 102 p 102 (105)
T 2awx_A 102 H 102 (105)
T ss_dssp -
T ss_pred c
Confidence 3
No 89
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.59 E-value=4e-08 Score=81.70 Aligned_cols=70 Identities=19% Similarity=0.328 Sum_probs=56.4
Q ss_pred eeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHh
Q 036586 312 ILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 312 ~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~ 388 (568)
.+|+.+... . ...|++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++.
T Consensus 16 g~G~~~~~~-~-----------~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~ 73 (90)
T 2he4_A 16 GYGFNLHSD-K-----------SRPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAE----------VVASIK 73 (90)
T ss_dssp BCCEEEEEC-S-----------SSSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHH----------HHHHHT
T ss_pred CccEEEEcc-C-----------CCCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHH----------HHHHHH
Confidence 477777654 1 135899999999999999 9999999999999999987 44 455565
Q ss_pred ccCCCCEEEEEEEECCE
Q 036586 389 QKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~ 405 (568)
.. |+.+.|+|.|.+.
T Consensus 74 ~~--~~~v~l~v~r~~~ 88 (90)
T 2he4_A 74 AR--EDEARLLVVGPST 88 (90)
T ss_dssp TS--SSEEEEEEECCCC
T ss_pred cC--CCcEEEEEEccCC
Confidence 43 7899999999764
No 90
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.59 E-value=1.1e-07 Score=80.32 Aligned_cols=77 Identities=17% Similarity=0.145 Sum_probs=56.8
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHh
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~ 388 (568)
..+|+.+..- . .....|++|..|.++|||++ | |++||+|++|||+++.++.... +..++.
T Consensus 15 ~~lG~~l~~~-~---------~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~ 76 (98)
T 2opg_A 15 TGLGLSIVGG-S---------DTLLGAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDE--------AINVLR 76 (98)
T ss_dssp TBTCEEEEEC-T---------TSTTCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHH
T ss_pred CcccEEEecC-C---------CCCCCCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 3478887654 1 11125899999999999999 9 9999999999999999875211 223333
Q ss_pred ccCCCCEEEEEEEECCEEE
Q 036586 389 QKYTGDSAVVKVLRNSEVH 407 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~~~ 407 (568)
. .++.+.|+|.|++...
T Consensus 77 ~--~~~~v~l~v~R~~~~~ 93 (98)
T 2opg_A 77 Q--TPQRVRLTLYRDEAPY 93 (98)
T ss_dssp T--CCSEEEEEEEECSSCC
T ss_pred h--CCCeEEEEEEcCCCCC
Confidence 2 4589999999988653
No 91
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.58 E-value=4.1e-09 Score=91.97 Aligned_cols=68 Identities=24% Similarity=0.323 Sum_probs=53.7
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIK 412 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~ 412 (568)
..|++|..|.++|||++ ||++||+|++|||++|.++... .+..++.. .|+.+.|+|.|+++..++++.
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~R~~~~~~~~~~ 105 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHA--------QVVELVRK--SGNSVTLLVLDGDSYEKAVKN 105 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHH--------HHHHHHHH--TCSEEEEEEECHHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCEEEEEEEECCcceehhhc
Confidence 46899999999999999 9999999999999999885210 04445543 489999999998876554433
No 92
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.57 E-value=9.1e-08 Score=79.14 Aligned_cols=71 Identities=20% Similarity=0.323 Sum_probs=53.5
Q ss_pred eeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccCCCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHhc
Q 036586 312 ILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESHVLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQ 389 (568)
Q Consensus 312 ~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~~ 389 (568)
.+|+.+... . +..|++|..| ++|||+.||++||+|++|||++|.++ .+ +..++..
T Consensus 15 g~G~~~~~~-~-----------~~~~~~v~~v-~~spA~aGl~~GD~I~~vng~~v~~~~~~~----------~~~~l~~ 71 (88)
T 3bpu_A 15 GFGFTIADS-P-----------GGGGQRVKQI-VDSPRSRGLKEGDLIVEVNKKNVQALTHNQ----------VVDMLVE 71 (88)
T ss_dssp BSSCEEEEC-T-----------TSSSEEEEEC-CC--CCTTCCTTCEEEEETTEECTTSCHHH----------HHHHHHT
T ss_pred ceeEEEEec-C-----------CCCcEEEEEe-cCChhHhCCCCCCEEEEECCEEcCCCCHHH----------HHHHHHh
Confidence 467777644 1 1358888887 99999889999999999999999987 33 4455554
Q ss_pred cCCCCEEEEEEEECCE
Q 036586 390 KYTGDSAVVKVLRNSE 405 (568)
Q Consensus 390 ~~~g~~v~l~V~R~g~ 405 (568)
...|+.+.|+|.|+|+
T Consensus 72 ~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 72 SPKGSEVTLLVQRQTR 87 (88)
T ss_dssp SCTTCEEEEEEEEECC
T ss_pred CCCCCEEEEEEEeCCc
Confidence 5578999999999874
No 93
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.55 E-value=1.1e-07 Score=79.04 Aligned_cols=59 Identities=25% Similarity=0.405 Sum_probs=47.9
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
..|++|..|.++|||++ ||++||+|++|||++|.++.+.. +..++. ..|+.+.|+|.|+
T Consensus 31 ~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 31 EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCL--------VVPLIA--ESGNKLDLVISRN 90 (91)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TSTTEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCEEEEEEEeC
Confidence 35899999999999999 99999999999999999876421 122332 3588999999986
No 94
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.55 E-value=1.4e-07 Score=79.49 Aligned_cols=59 Identities=19% Similarity=0.131 Sum_probs=46.8
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..+ ..........++.+.|+|.|.
T Consensus 30 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~----------~~~~~~~~~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 30 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPF----------QVSYALFKGANGKVSMEVTRP 90 (96)
T ss_dssp SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCH----------HHHHHHHHTCSSEEEEEEECC
T ss_pred CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCH----------HHHHHHHhcCCCcEEEEEEeC
Confidence 35899999999999999 9 99999999999999987544 111222233567899999985
No 95
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.54 E-value=1.2e-07 Score=79.97 Aligned_cols=61 Identities=11% Similarity=0.210 Sum_probs=50.0
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
.|++|..|.++|||++ | |++||+|++|||++|.++... .+..++. ..|+.+.|+|.|+|+.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~l~--~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLS--------EAIHLLQ--MAGETVTLKIKKQTDA 92 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHH--------HHHHHHH--TCCSEEEEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH--cCCCeEEEEEEeCCCC
Confidence 5899999999999999 9 999999999999999875311 0344454 4789999999998864
No 96
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.54 E-value=1.8e-08 Score=85.16 Aligned_cols=60 Identities=20% Similarity=0.419 Sum_probs=51.0
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCC--CCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ ||++||+|++|||++|.+ +.+ +..++... .++.+.|+|.|+|+
T Consensus 32 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~-~~~~~~l~v~R~g~ 94 (98)
T 2jxo_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGD----------VVSAIRAG-GDETKLLVVDRETD 94 (98)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHHHHTT-TTEEEEEECCHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC-CCcEEEEEEECCch
Confidence 35899999999999999 999999999999999998 444 55666665 67788899998775
No 97
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.54 E-value=1.1e-08 Score=91.14 Aligned_cols=83 Identities=16% Similarity=0.233 Sum_probs=61.4
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHh
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~ 388 (568)
..+|+.+... ....+..+|+.. ..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++.
T Consensus 42 ~~lG~~i~~~-~~~~~~~~g~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~l~ 111 (128)
T 1nf3_C 42 KPLGFYIRDG-SSVRVTPHGLEK-VPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ--------VTDMMI 111 (128)
T ss_dssp SCCCEEEEEE-EEEEEETTEEEE-EEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH--------HHHHHH
T ss_pred CCccEEEEcc-ccccccccccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 3478888766 444445555543 45899999999999999 9 9999999999999996543210 344554
Q ss_pred ccCCCCEEEEEEEECCE
Q 036586 389 QKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~ 405 (568)
. .++.+.|+|.|+++
T Consensus 112 ~--~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 112 A--NSRNLIITVRPANQ 126 (128)
T ss_dssp H--TTTSEEEEEECCCC
T ss_pred c--CCCeEEEEEEECCc
Confidence 3 46779999999875
No 98
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=2.1e-07 Score=77.59 Aligned_cols=62 Identities=15% Similarity=0.209 Sum_probs=48.0
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVH 407 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~ 407 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .++.+.|+|.|++...
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVE--------LAHEIRS--CPSEIILLVWRMVPQV 86 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHHT--CSSEEEEEEEECC---
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCCCC
Confidence 4799999999999999 99999999999999999764211 3344433 4678999999987653
No 99
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.53 E-value=7e-08 Score=79.19 Aligned_cols=60 Identities=13% Similarity=0.277 Sum_probs=47.5
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.++|||++ ||++||+|++|||+++.++.... +..++. ..++.+.|+|.|+|+
T Consensus 25 ~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~ 85 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLE--------AQNKIK--SASYNLSLTLQKSKR 85 (85)
T ss_dssp SCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHH--------HHHHHT--TCSSCEEEEEESCCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH--------HHHHHH--cCCCeEEEEEEeCCC
Confidence 4899999999999999 99999999999999999874211 222332 246779999999873
No 100
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.53 E-value=2.3e-08 Score=88.86 Aligned_cols=81 Identities=17% Similarity=0.191 Sum_probs=64.9
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CC-CCCCEEEEECCEEcCC--CCCCccccCccchHHHH
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VL-KPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 386 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL-~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~ 386 (568)
..+|+.+... . ...|++|..|.++|||++ || ++||+|++|||++|.+ +.+ +..+
T Consensus 20 ~glG~~~~~~-~-----------~~~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~----------~~~~ 77 (127)
T 1b8q_A 20 GGLGFLVKER-V-----------SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDS----------ALEV 77 (127)
T ss_dssp SCCSCCEEEC-T-----------TSSCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHH----------HHHH
T ss_pred CcEeEEEEec-C-----------CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 3578877654 1 134899999999999999 98 9999999999999998 444 5566
Q ss_pred HhccCCCCEEEEEEEECCEEEEEEEEec
Q 036586 387 VSQKYTGDSAVVKVLRNSEVHEFNIKLS 414 (568)
Q Consensus 387 l~~~~~g~~v~l~V~R~g~~~~v~v~l~ 414 (568)
+.. ..|+.+.|+|.|+|+...+++++.
T Consensus 78 l~~-~~g~~v~l~v~R~g~~~~~~~~~~ 104 (127)
T 1b8q_A 78 LRG-IASETHVVLILRGPEGFTTHLETT 104 (127)
T ss_dssp HHS-CCSSCEEEEEECCCCSEEECCCCC
T ss_pred HHh-CCCCeEEEEEEeCCceEEEEEEEE
Confidence 665 478899999999999877776653
No 101
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.52 E-value=4e-08 Score=82.51 Aligned_cols=60 Identities=17% Similarity=0.268 Sum_probs=50.7
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++... ++.+.|+|.|+|+.
T Consensus 29 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~--~~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 29 HTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAE----------AQSKIRQS--ASPLRLQLDRSSGP 91 (94)
T ss_dssp TEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHHHHTC--CSSEEEEEECCCCC
T ss_pred CCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC--CCcEEEEEEECCcC
Confidence 35899999999999999 9999999999999999987 44 45566554 37899999999864
No 102
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.51 E-value=1.1e-07 Score=78.81 Aligned_cols=60 Identities=17% Similarity=0.241 Sum_probs=48.2
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .|+.+.|+|.|+++
T Consensus 27 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 27 VPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIE--------AQNKIRA--CGERLSLGLSRAIT 87 (89)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHH--------HHHHHHT--CTTEEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCEEEEEEEeCCC
Confidence 4899999999999999 99999999999999999763211 2233332 47899999999875
No 103
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.51 E-value=8.4e-08 Score=80.51 Aligned_cols=61 Identities=15% Similarity=0.187 Sum_probs=49.0
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..+++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .|+.+.|+|.|+|+
T Consensus 31 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLE--------AQNRIKG--CHDHLTLSVSSGPS 92 (94)
T ss_dssp TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHH--------HHHHHHT--CCSCEEEEEECCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCC
Confidence 35799999999999999 99999999999999999874311 2233332 67889999999875
No 104
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.50 E-value=3.3e-08 Score=85.99 Aligned_cols=77 Identities=16% Similarity=0.207 Sum_probs=58.0
Q ss_pred eeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhcc
Q 036586 312 ILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQK 390 (568)
Q Consensus 312 ~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~ 390 (568)
-+|+.+... . ....|++|..|.+++||++ ||++||+|++|||++|.++.+.. +..++..
T Consensus 28 ~lG~~l~~~-~----------~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~--------~~~~~~~- 87 (114)
T 1x5n_A 28 GLGCSISSG-P----------IQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKE--------AVNVLKS- 87 (114)
T ss_dssp CCCEEEEEC-C----------SSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTH--------HHHHHHH-
T ss_pred ceeEEEeec-C----------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc-
Confidence 478888765 1 1145899999999999999 99999999999999999986522 2333332
Q ss_pred CCCCEEEEEEEEC-CEEEEEE
Q 036586 391 YTGDSAVVKVLRN-SEVHEFN 410 (568)
Q Consensus 391 ~~g~~v~l~V~R~-g~~~~v~ 410 (568)
++.+.|+|.|+ |+.+.+.
T Consensus 88 --~~~v~l~v~r~~g~~~~~~ 106 (114)
T 1x5n_A 88 --SRSLTISIVAAAGRELFMT 106 (114)
T ss_dssp --CSSEEEEECSSTTTHHHHS
T ss_pred --CCeEEEEEEcCCCCceEEE
Confidence 36799999998 7654333
No 105
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.50 E-value=1.9e-08 Score=85.92 Aligned_cols=67 Identities=16% Similarity=0.180 Sum_probs=52.9
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIK 412 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~ 412 (568)
.+++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .++.+.|+|.|+++..+++++
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~g~~~~~~v~ 96 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLE--------AQNKIKA--CTGSLNMTLQRASAAAKSEPV 96 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHH--------HHHHHHH--CSSEEEEEECCCSCCCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCCcCCCCCC
Confidence 4689999999999999 99999999999999999874311 2233333 478999999999987655543
No 106
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.50 E-value=4.5e-07 Score=78.60 Aligned_cols=88 Identities=14% Similarity=0.149 Sum_probs=69.0
Q ss_pred eecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCCH
Q 036586 434 IAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL 513 (568)
Q Consensus 434 ~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l 513 (568)
|+|+.++.++ +...+.+++.. ........+++|..|.+++++...|++.||+|++|||+++.++
T Consensus 7 ~lGi~~~~l~-~~~~~~~~~~~---------------~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~ 70 (113)
T 2pzd_A 7 YIGVMMLTLS-PSILAELQLRE---------------PSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNA 70 (113)
T ss_dssp ECCEEEEECC-HHHHHHHHHHC---------------SSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSH
T ss_pred EeEEEEEeCC-HHHHHHhcccc---------------ccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCH
Confidence 7899999998 55555555210 0001234679999999998887778889999999999999999
Q ss_pred HHHHHHHHccCCCeEEEEEEcCeEEE
Q 036586 514 KSLADMVESSEDEFLKFDLEYQQIVV 539 (568)
Q Consensus 514 ~~f~~~l~~~~~~~v~l~v~R~~~~~ 539 (568)
++|.++++. ++.+.|++.|+++..
T Consensus 71 ~~~~~~l~~--~~~v~l~v~R~g~~~ 94 (113)
T 2pzd_A 71 EDVYEAVRT--QSQLAVQIRRGRETL 94 (113)
T ss_dssp HHHHHHHHH--CSSEEEEEEETTEEE
T ss_pred HHHHHHHhC--CCeEEEEEEECCEEE
Confidence 999999987 578999999988643
No 107
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.49 E-value=1.5e-07 Score=77.25 Aligned_cols=60 Identities=13% Similarity=0.206 Sum_probs=48.9
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLR 402 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R 402 (568)
..|++|..|.++|||++ | |++||+|++|||++|.++... .+..++.....|+.+.|+|.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHA--------QVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHH--------HHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCeEEEEEEC
Confidence 35799999999999999 9 999999999999999865321 145666666568899999876
No 108
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.49 E-value=1.6e-07 Score=80.90 Aligned_cols=60 Identities=18% Similarity=0.137 Sum_probs=47.1
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECC
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNS 404 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g 404 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..+ ..........++.+.|+|.|..
T Consensus 24 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~----------~~~~~~~~~~~~~v~l~v~R~~ 85 (106)
T 2la8_A 24 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPF----------QVCYALFKGANGKVSMEVTRPK 85 (106)
T ss_dssp SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCH----------HHHHHHHHSCBSCEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCH----------HHHHHHHhCCCCeEEEEEEeCC
Confidence 35899999999999999 9 99999999999999987554 1112222235678999999853
No 109
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.49 E-value=7e-08 Score=81.69 Aligned_cols=59 Identities=14% Similarity=0.198 Sum_probs=48.4
Q ss_pred ceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 337 GVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 337 Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
|++|..|.++|||++ ||++||+|++|||++|.++.... +..++. ..|+.+.|+|.|+|+
T Consensus 35 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMD--------VVELLL--KSGNKISLRTTALEN 94 (99)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHH--HSCSEEEEEEECSCS
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHh--cCCCEEEEEEEECCC
Confidence 789999999999999 99999999999999999543211 344444 378999999999775
No 110
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.49 E-value=1.7e-07 Score=78.32 Aligned_cols=61 Identities=15% Similarity=0.175 Sum_probs=48.3
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++. ..++.+.|+|.|+|+
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEE--------AVASLK--NTSDMVYLKVAKPGS 94 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHH--------HHHHHH--TCCSEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEcCCC
Confidence 45899999999999999 9 9999999999999999864211 223333 246799999999874
No 111
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.48 E-value=1.1e-07 Score=79.40 Aligned_cols=68 Identities=22% Similarity=0.280 Sum_probs=55.8
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEc-CCCCCCccccCccchHHHH
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDI-ANDGTVPFRHGERIGFSYL 386 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V-~~~~dl~~~~~~~~~l~~~ 386 (568)
..+||+.+... ..|++|..|.++|||++ | |++||+|++|||++| .++.+ +..+
T Consensus 17 ~~~lG~~i~~~--------------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~----------~~~~ 72 (91)
T 2e7k_A 17 GEHLGVTFRVE--------------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRA----------LQEL 72 (91)
T ss_dssp TCCCCEEEEES--------------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHH----------HHHH
T ss_pred CCcEeEEEEec--------------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHH----------HHHH
Confidence 36789998763 35899999999999999 7 999999999999999 66655 5566
Q ss_pred HhccCCCCEEEEEEEEC
Q 036586 387 VSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 387 l~~~~~g~~v~l~V~R~ 403 (568)
+.. .++.+.|+|.|.
T Consensus 73 l~~--~~~~v~l~v~~~ 87 (91)
T 2e7k_A 73 LRN--ASGSVILKILSG 87 (91)
T ss_dssp HHT--CCSSBCEEEECC
T ss_pred HHc--CCCeEEEEEEEC
Confidence 654 467899999874
No 112
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.48 E-value=2.5e-08 Score=86.19 Aligned_cols=68 Identities=21% Similarity=0.254 Sum_probs=52.8
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIK 412 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~ 412 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++. ..++.+.|+|.|+++...+.++
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~~~~~~v~ 104 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLR--------AVDLIR--HGGKKMRFLVAKSDVETAKKIH 104 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHH--------HHHHHH--TCCSEEEEEEECCCHHHHHHHS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCcceeEEEE
Confidence 46899999999999999 9 9999999999999998654311 222332 3589999999999876544443
No 113
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.48 E-value=1.9e-07 Score=78.24 Aligned_cols=59 Identities=25% Similarity=0.423 Sum_probs=47.9
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++.. .++.+.+.+.|.+..
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDG----------VVEMIRK--GGDQTTLLVLDKELE 90 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHH----------HHHHHHT--TTTEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHh--CCCeEEEEEECCccc
Confidence 4899999999999999 9999999999999999988 44 4455554 567888888886653
No 114
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.48 E-value=1.7e-07 Score=79.54 Aligned_cols=67 Identities=18% Similarity=0.232 Sum_probs=53.8
Q ss_pred eeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCC--CCCCccccCccchHHHHH
Q 036586 312 ILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLV 387 (568)
Q Consensus 312 ~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~l 387 (568)
.||+.+... ...|++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..++
T Consensus 25 ~lG~~l~~~-------------~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~----------~~~~l 81 (97)
T 2ejy_A 25 PMGICLKLN-------------EKQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQ----------LQKAM 81 (97)
T ss_dssp CCSEEEEEC-------------TTCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHH----------HHHHH
T ss_pred CeeEEEEeC-------------CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHH
Confidence 478887653 135899999999999999 9 99999999999999996 655 56677
Q ss_pred hccCCCCEEEEEEEEC
Q 036586 388 SQKYTGDSAVVKVLRN 403 (568)
Q Consensus 388 ~~~~~g~~v~l~V~R~ 403 (568)
... ++.+.|+|.+.
T Consensus 82 ~~~--~~~v~L~V~~~ 95 (97)
T 2ejy_A 82 KET--KGMISLKVIPN 95 (97)
T ss_dssp HHC--CEEEEEEEECC
T ss_pred HcC--CCeEEEEEEEC
Confidence 653 67888888764
No 115
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.48 E-value=4.1e-07 Score=86.46 Aligned_cols=72 Identities=21% Similarity=0.414 Sum_probs=58.6
Q ss_pred CCceEEEEecCCCcccCCCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEE---CCEEEEEEE
Q 036586 335 QKGVRIRRIEPTAPESHVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLR---NSEVHEFNI 411 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R---~g~~~~v~v 411 (568)
..|++|..|.++|||++||++||+|++|||++|.+..... +..++. ..++.+.|+|.| +|+...+.+
T Consensus 23 ~~g~~V~~v~~~spA~~gl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~r~~~~G~~~~~~v 92 (195)
T 2qbw_A 23 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLLK--TFQNTVELIIVREVGNGAKQEIRV 92 (195)
T ss_dssp CCSEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCCHHH--------HHHHHH--HCCSEEEEEEEEECSSSCEEEEEE
T ss_pred CCCEEEEEECCCChHHhCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEEcCCCCCCceeEe
Confidence 5699999999999999999999999999999999876411 122222 346799999999 999998888
Q ss_pred EeccC
Q 036586 412 KLSTH 416 (568)
Q Consensus 412 ~l~~~ 416 (568)
.+...
T Consensus 93 ~~~~~ 97 (195)
T 2qbw_A 93 RVEKD 97 (195)
T ss_dssp EEECC
T ss_pred Eeecc
Confidence 88754
No 116
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.47 E-value=6.5e-08 Score=86.06 Aligned_cols=58 Identities=17% Similarity=0.270 Sum_probs=50.7
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
.+++|..|.+++||++ | |++||+|++|||++|. ++.+ +..++.....|+.+.|+|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d----------~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLRE----------FLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHH----------HHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH----------HHHHHhcCCCCCEEEEEEEEC
Confidence 4789999999999999 9 9999999999999996 5555 566777666799999999997
No 117
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.47 E-value=3.3e-07 Score=78.50 Aligned_cols=62 Identities=16% Similarity=0.254 Sum_probs=49.8
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++. ..|+.+.|+|.|+|+.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQER--------AAELMT--RTSSVVTLEVAKQGAI 100 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEECCCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCcc
Confidence 46899999999999999 9 9999999999999998754311 222332 3689999999998763
No 118
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.47 E-value=3.6e-08 Score=84.26 Aligned_cols=59 Identities=22% Similarity=0.321 Sum_probs=50.6
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCC--CCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
.+++|..|.++|||++ ||++||+|++|||++|.+ +.+ +..++... |+.+.|+|.|+|+.
T Consensus 29 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~--g~~v~l~v~R~g~~ 90 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHAD----------AQDRIKAA--SYQLCLKIDRAETR 90 (103)
T ss_dssp EEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHH----------HHHHHTTC--CSEEECEECCCTTT
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC--CCeEEEEEEECCeE
Confidence 3799999999999999 999999999999999998 544 45566554 89999999999874
No 119
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=1.3e-07 Score=82.80 Aligned_cols=61 Identities=20% Similarity=0.263 Sum_probs=49.1
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
.|++|..|.++|||++ | |++||+|++|||++|.+..... +..++.. .++.+.|+|.|+++.
T Consensus 49 ~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 49 IGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE--------VQSIISQ--QSGEAEICVRLDLNM 111 (117)
T ss_dssp EEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH--------HHHHHSC--CSSCEEEEEESSCCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH--------HHHHHhc--CCCEEEEEEEECCcc
Confidence 4899999999999999 9 9999999999999998754311 2333433 678899999998763
No 120
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.46 E-value=2e-07 Score=79.34 Aligned_cols=74 Identities=14% Similarity=0.128 Sum_probs=57.1
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC--CCCCCCEEEEECCEEc--CCCCCCccccCccchHHHH
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH--VLKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYL 386 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V--~~~~dl~~~~~~~~~l~~~ 386 (568)
.+||+.+..- . ......+++|..|.++|||++ +|++||+|++|||++| .++.+ +..+
T Consensus 21 ~~lG~~i~~~-~--------~~~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~----------~~~~ 81 (101)
T 2yt7_A 21 EGLGVALVES-G--------WGSLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAA----------CQAA 81 (101)
T ss_dssp CCCCEEEEEC-C--------CSSSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHH----------HHHH
T ss_pred CccCEEEEeC-C--------CCCCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 4689988653 1 001123799999999999998 5999999999999999 55555 5677
Q ss_pred HhccCCCCEEEEEEEEC
Q 036586 387 VSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 387 l~~~~~g~~v~l~V~R~ 403 (568)
+.....|+.+.|+|.|.
T Consensus 82 l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 82 VRETKSQTSVTLSIVHC 98 (101)
T ss_dssp HHHTTTSSEEEEEECCC
T ss_pred HHhCCCCCeEEEEEEeC
Confidence 77655789999999873
No 121
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.46 E-value=1.7e-07 Score=80.24 Aligned_cols=71 Identities=17% Similarity=0.232 Sum_probs=55.5
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHH
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLV 387 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l 387 (568)
.++|+.+..- . . ...|++|..|.++|||++ ||++||+|++|||++|.+. .+ +..++
T Consensus 27 ~~lG~~~~~~-~---------~-~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l 85 (104)
T 1wi2_A 27 AQLGFNIRGG-K---------A-SQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSK----------AVEIL 85 (104)
T ss_dssp CCCSEEEECC-S---------S-SCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHH----------HHHHH
T ss_pred CCccEEEEcc-c---------C-CCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHH
Confidence 5689988653 1 1 135899999999999999 9999999999999999983 33 34444
Q ss_pred hccCCCCEEEEEEEECCE
Q 036586 388 SQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 388 ~~~~~g~~v~l~V~R~g~ 405 (568)
.. ++.+.|+|.|+..
T Consensus 86 ~~---~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 86 KT---AREISMRVRFFSG 100 (104)
T ss_dssp HH---SSSEEEEEECCCC
T ss_pred hC---CCEEEEEEEECCC
Confidence 43 7889999988653
No 122
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.46 E-value=1.9e-07 Score=78.69 Aligned_cols=56 Identities=18% Similarity=0.326 Sum_probs=47.5
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++... ++.+.|+|.|+
T Consensus 37 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~--~~~v~l~v~~~ 95 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHRE----------IVDIIKAS--GNVLRLETLYG 95 (96)
T ss_dssp EEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHH----------HHHHHHHT--TTEEEEEEECC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC--CCeEEEEEEEC
Confidence 4899999999999999 9999999999999999985 44 55666654 56899999875
No 123
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.46 E-value=9.2e-08 Score=82.00 Aligned_cols=62 Identities=26% Similarity=0.362 Sum_probs=51.2
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.++|||++ ||++||+|++|||++|.++.... +..++. ..|+.+.|+|.|+++.
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~r~~~~ 87 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQ--------VVELVR--KSGNSVTLLVLDGDSY 87 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHH--------HHHHHH--HTTTEEEEEEECHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCEEEEEEEECCee
Confidence 45899999999999999 99999999999999999887211 445555 3688999999997754
No 124
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.45 E-value=4.4e-07 Score=76.58 Aligned_cols=60 Identities=17% Similarity=0.243 Sum_probs=47.8
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.+. |++ ||++||+|++|||++|.++..- .+..++.....|+.+.|+|.|+++
T Consensus 32 ~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 32 TGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHT--------EVVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp TEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHH--------HHHHHHHHSCTTSEEEEEEECCSS
T ss_pred CCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHcCCCCCEEEEEEEECCC
Confidence 48999999983 566 9999999999999999886321 145667665568999999999875
No 125
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.45 E-value=2.8e-07 Score=80.68 Aligned_cols=71 Identities=24% Similarity=0.314 Sum_probs=55.9
Q ss_pred eeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhcc
Q 036586 313 LGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQK 390 (568)
Q Consensus 313 lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~ 390 (568)
+|+.+... .. ..|++|..|.++|||++ | |++||+|++|||++|.++.+ +.......
T Consensus 27 lG~~l~~~-~~-----------~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~----------~~~~~~~~ 84 (119)
T 1tp5_A 27 LGFNIVGG-ED-----------GEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASH----------EQAAIALK 84 (119)
T ss_dssp CCEEEEEC-GG-----------GCCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCH----------HHHHHHHH
T ss_pred ccEEEecC-CC-----------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH----------HHHHHHHH
Confidence 78887654 11 25899999999999999 9 99999999999999999865 22222223
Q ss_pred CCCCEEEEEEEECCE
Q 036586 391 YTGDSAVVKVLRNSE 405 (568)
Q Consensus 391 ~~g~~v~l~V~R~g~ 405 (568)
..|+.+.|+|.|++.
T Consensus 85 ~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 85 NAGQTVTIIAQYKPE 99 (119)
T ss_dssp TSCSEEEEEEEECHH
T ss_pred cCCCeEEEEEEECCc
Confidence 468899999999764
No 126
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.45 E-value=1.2e-07 Score=84.47 Aligned_cols=78 Identities=17% Similarity=0.353 Sum_probs=59.6
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCC--CCCCccccCccchHHHH
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 386 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~ 386 (568)
..+|+.+........ ++ ...|++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..+
T Consensus 27 ~~lG~~i~~~~~~~~---~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~----------~~~~ 90 (129)
T 2dmz_A 27 QSLGIRIVGYVGTSH---TG---EASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHD----------VVEV 90 (129)
T ss_dssp CCCCEEEEEECCCSS---SC---CCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHH----------HHHH
T ss_pred CCcCEEEEeecCCcc---cC---CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 457888876411110 11 246899999999999999 9 99999999999999998 333 4556
Q ss_pred HhccCCCCEEEEEEEECCEE
Q 036586 387 VSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 387 l~~~~~g~~v~l~V~R~g~~ 406 (568)
+.. .|+.+.|+|.|+|+.
T Consensus 91 l~~--~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 91 LRN--AGQVVHLTLVRRKTS 108 (129)
T ss_dssp HHH--CCSSEEEEEEEESSS
T ss_pred HHc--CCCeEEEEEEeCCcc
Confidence 655 788999999998864
No 127
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.45 E-value=5.1e-07 Score=78.20 Aligned_cols=87 Identities=15% Similarity=0.123 Sum_probs=67.2
Q ss_pred eecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCCH
Q 036586 434 IAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL 513 (568)
Q Consensus 434 ~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l 513 (568)
|+|+.+++++ +.+++.|++.- ........+++|..|.+++++...+++.||+|++|||+++.++
T Consensus 7 ~lGi~~~~l~-~~~~~~~~~~~---------------~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~ 70 (112)
T 2p3w_A 7 FIGIRMRTIT-PSLVDELKASN---------------PDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDS 70 (112)
T ss_dssp ECCEEEEECC-HHHHHHHHHHC---------------TTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSH
T ss_pred eeeEEEecCC-HHHHHHhcccC---------------cCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCH
Confidence 7899999998 55665655210 0001224679999999988877777779999999999999999
Q ss_pred HHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 514 KSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 514 ~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
.+|.++++ +++.+.|++.|+++.
T Consensus 71 ~~~~~~l~--~g~~v~l~v~R~g~~ 93 (112)
T 2p3w_A 71 SELQEAVL--TESPLLLEVRRGNDD 93 (112)
T ss_dssp HHHHHHHH--HCSSEEEEEEETTEE
T ss_pred HHHHHHHh--CCCeEEEEEEECCEE
Confidence 99999995 467899999998864
No 128
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.44 E-value=3.2e-07 Score=76.92 Aligned_cols=60 Identities=22% Similarity=0.402 Sum_probs=48.2
Q ss_pred CCceEEEEecCCCcccCCCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECC
Q 036586 335 QKGVRIRRIEPTAPESHVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNS 404 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g 404 (568)
..|++|..|.++|||++||++||+|++|||++|.+..... +..++. ..++.+.|+|.|+.
T Consensus 34 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 34 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLLK--TFQNTVELIIVREV 93 (95)
T ss_dssp CCCEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCBHHH--------HHHHHH--HCCSEEEEEEEEEC
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEEcCCCCHHH--------HHHHhh--cCCCeEEEEEEeCC
Confidence 4699999999999998899999999999999998865411 222332 36899999999864
No 129
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.44 E-value=2e-07 Score=82.37 Aligned_cols=63 Identities=13% Similarity=0.254 Sum_probs=51.8
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ | |++||+|++|||++|.++... .+..++.....|+.+.|+|.|++.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHA--------DVVKLFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHH--------HHHHHHHTSCTTCEEEEEEEESCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCeEEEEEEeCCC
Confidence 45899999999999999 9 999999999999999854321 155667666568999999999873
No 130
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.44 E-value=2.8e-07 Score=78.22 Aligned_cols=61 Identities=25% Similarity=0.304 Sum_probs=49.2
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .|+.+.|+|.|+++
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQD--------AVDLFRN--AGYAVSLRVQHRLE 98 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHHHT--CCSEEEEEEEEESC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEeCCC
Confidence 46899999999999999 9 9999999999999999874311 2233332 57899999999775
No 131
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.44 E-value=9.6e-08 Score=81.59 Aligned_cols=63 Identities=17% Similarity=0.186 Sum_probs=50.0
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..+++|..|.++|||++ | |++||+|++|||++|.+...- .+..++.....|+.+.|+|.|++.
T Consensus 33 ~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 33 GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHR--------YVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHH--------HHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCcEEEEEEeCCC
Confidence 45899999999999999 9 999999999999999764310 034455544347899999999764
No 132
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.44 E-value=8.3e-08 Score=82.57 Aligned_cols=80 Identities=15% Similarity=0.339 Sum_probs=58.0
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHh
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~ 388 (568)
..+|+.+....... ......|++|..|.++|||++ | |++||+|++|||++|.++... .+..++.
T Consensus 25 ~~lG~~~~~~~~~~------~~~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~--------~~~~~l~ 90 (108)
T 2jre_A 25 SSLGISISGMRDQS------TTGEATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQS--------DVVEVLR 90 (108)
T ss_dssp SCCSEEEECCCCCS------CSSCCCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHH--------HHHHHHH
T ss_pred CCcCEEEEcccCCC------CCCCCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH
Confidence 45888876531100 001245899999999999999 9 999999999999999986321 0334444
Q ss_pred ccCCCCEEEEEEEECCEE
Q 036586 389 QKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~~ 406 (568)
. .|+.+.|+|.|+++.
T Consensus 91 ~--~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 91 N--AGNPVRLLLIRRLPL 106 (108)
T ss_dssp H--HCSEEEEEEEECCCC
T ss_pred c--CCCeEEEEEEeCCcC
Confidence 3 688999999998864
No 133
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.43 E-value=1.1e-07 Score=83.86 Aligned_cols=60 Identities=15% Similarity=0.193 Sum_probs=52.5
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCC--CCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.+++|..|.+++||++ | |++||+|++|||++|.+ +.+ +..++....+|+.+.|+|.|+++
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEE----------ANQLLRDSSITSKVTLEIEFDVA 108 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHH----------HHHHHHHHTTTTCEEEEEEEECC
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhCCCCCeEEEEEEECCc
Confidence 4689999999999999 9 99999999999999987 555 56777776568999999999876
No 134
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.42 E-value=4.6e-07 Score=77.14 Aligned_cols=60 Identities=25% Similarity=0.361 Sum_probs=48.3
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.++|||++ | |++||+|++|||++|.++.... +..++ ...++.+.|+|.|+++
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ--------AAIAL--KNAGQTVTIIAQYKPE 96 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHH--------HHHHH--HTSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEECcc
Confidence 4899999999999999 9 9999999999999998776521 12222 3367899999999754
No 135
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.42 E-value=5.2e-07 Score=93.94 Aligned_cols=94 Identities=17% Similarity=0.165 Sum_probs=76.7
Q ss_pred eeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCC
Q 036586 433 IIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN 512 (568)
Q Consensus 433 ~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~ 512 (568)
.|+|+.+++++ +.+.+.++++ ...|++|..|.+++++...|++.||+|++|||++|.+
T Consensus 240 ~~lGv~~~~~~-~~~a~~~gl~---------------------~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~ 297 (345)
T 3stj_A 240 GLLGIKGTEMS-ADIAKAFNLD---------------------VQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNS 297 (345)
T ss_dssp EECCEEEEECC-HHHHHHTTCS---------------------CCSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSC
T ss_pred cccceeeEeec-HHHHHhcCCC---------------------CCceEEEEEeccCChHHHcCCCCCCEEEEECCEECCC
Confidence 48999999998 5566677742 2467999999999988888888999999999999999
Q ss_pred HHHHHHHHHcc-CCCeEEEEEEcCeEEEEeccchHhH
Q 036586 513 LKSLADMVESS-EDEFLKFDLEYQQIVVLKSKTAKEA 548 (568)
Q Consensus 513 l~~f~~~l~~~-~~~~v~l~v~R~~~~~l~~~~~~~~ 548 (568)
+.+|.++|... +++.+.|++.|+|+..--.-++.+.
T Consensus 298 ~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~ 334 (345)
T 3stj_A 298 FAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTS 334 (345)
T ss_dssp HHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECEEC
T ss_pred HHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEccc
Confidence 99999999886 6789999999998755443444433
No 136
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.42 E-value=2.7e-07 Score=78.49 Aligned_cols=62 Identities=18% Similarity=0.223 Sum_probs=50.2
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++.. .|+.+.|+|.|+++.
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSR--------AVEALKE--AGPVVRLVVRRRQPP 96 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHHHH--SCSEEEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCCC
Confidence 46999999999999999 9 9999999999999998754311 2233433 689999999998864
No 137
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.42 E-value=3.1e-08 Score=86.63 Aligned_cols=61 Identities=18% Similarity=0.287 Sum_probs=50.2
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcC---CCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIA---NDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVH 407 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~---~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~ 407 (568)
..|++|..|.++|||++ | |++||+|++|||++|. ++.+ +..++.. .|+.+.|+|.|+++..
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~----------~~~~l~~--~~~~v~l~v~R~~~~~ 113 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQ----------AISILQK--AKDTVQLVIARGSLPQ 113 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHH----------HHHHHHH--CCSEEEEEEESSCCGG
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHH----------HHHHHHc--CCCEEEEEEEeCCcce
Confidence 35899999999999999 9 9999999999999998 3333 3444543 5889999999988743
No 138
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.41 E-value=2.9e-07 Score=80.04 Aligned_cols=69 Identities=22% Similarity=0.257 Sum_probs=55.0
Q ss_pred eeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CC-CCCCEEEEECCEEcCCCC--CCccccCccchHHHHH
Q 036586 312 ILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VL-KPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLV 387 (568)
Q Consensus 312 ~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL-~~GDiIl~InG~~V~~~~--dl~~~~~~~~~l~~~l 387 (568)
.+|+.+... ..|++|..|.+++||++ || ++||+|++|||++|.++. + +..++
T Consensus 38 ~lG~~i~~~--------------~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~----------~~~~l 93 (113)
T 1va8_A 38 PLGATVRNE--------------MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNE----------VFDLL 93 (113)
T ss_dssp CCCEEEEEC--------------SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHH----------HHHHH
T ss_pred ceeEEEEeC--------------CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHH
Confidence 467777554 35899999999999999 99 999999999999999653 3 44555
Q ss_pred hccCCCCEEEEEEEECCEE
Q 036586 388 SQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 388 ~~~~~g~~v~l~V~R~g~~ 406 (568)
.. .++.+.|+|.|+++.
T Consensus 94 ~~--~~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 94 SD--MHGTLTFVLIPSSGP 110 (113)
T ss_dssp HH--CCEEEEEEEECCCCC
T ss_pred Hc--CCCeEEEEEEECCcc
Confidence 44 346899999998864
No 139
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.41 E-value=7.2e-07 Score=75.81 Aligned_cols=62 Identities=11% Similarity=0.053 Sum_probs=54.5
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHcc-CCCeEEEEEEcCeEEE
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESS-EDEFLKFDLEYQQIVV 539 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~-~~~~v~l~v~R~~~~~ 539 (568)
..|++|..|.+++++.. +++.||+|++|||++|.+|++|.++|... +++.+.|++.|+++..
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~ 68 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNE 68 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 36799999999887775 88899999999999999999999999986 5779999999988643
No 140
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.41 E-value=3.2e-07 Score=79.60 Aligned_cols=62 Identities=16% Similarity=0.187 Sum_probs=49.5
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++. ..|+.+.|+|.|+++.
T Consensus 48 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 48 NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSR--------AIELIK--NGGRRVRLFLKRGETS 111 (112)
T ss_dssp TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TTTTEEEEEEECCEEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCcc
Confidence 35899999999999999 9 9999999999999998874311 223333 2688999999998764
No 141
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=98.41 E-value=1.4e-06 Score=83.91 Aligned_cols=127 Identities=18% Similarity=0.221 Sum_probs=83.0
Q ss_pred ceEEEEEEeCCEEEEcccccCCC--CeE----EEEEcC-----CCcEEEEEEEEEeC--------CCCeEEEEeccCccc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH--TQV----KVKKRG-----SDTKYLATVLSIGT--------ECDIALLTVKDDEFW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~--~~i----~V~~~~-----dg~~~~a~vv~~d~--------~~DlAlLkv~~~~~~ 210 (568)
..++|++|++.+|||+||++.+. ..+ .|.+.. .+..+..+-+..+| ..|||||+++.. +.
T Consensus 30 ~~CgGtLIs~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~-~~ 108 (215)
T 1p3c_A 30 SSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTN-IG 108 (215)
T ss_dssp CEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSC-HH
T ss_pred ceEEEEEEeCCEEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCC-Cc
Confidence 56999999999999999999643 344 666521 12234444444443 459999999974 43
Q ss_pred cCccceecCCCc-ccCCeEEEEecCCC------CCCceEEEEEEeeeeccc--------ccCCCceeecccceEEEEEee
Q 036586 211 EGVSPVEFGDLP-ALQDAVTVVGYPIG------GDTISVTSGVVSRMEILS--------YVHGSTELLGLQGKCVGIAFQ 275 (568)
Q Consensus 211 ~~l~~~~l~~~~-~~g~~V~aiG~P~g------~~~~svt~GiIs~~~~~~--------~~~ggspL~n~~G~VVGI~~~ 275 (568)
..+.|+.|.... ..++.++++|++.. .....+...+++.-.... ...+||||+..+|.++||++.
T Consensus 109 ~~v~pi~l~~~~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~~c~~~~~~~~~C~GDSGgPl~~~~g~lvGi~S~ 188 (215)
T 1p3c_A 109 NTVGYRSIRQVTNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDTNLAYYTIDTFSGNSGSAMLDQNQQIVGVHNA 188 (215)
T ss_dssp HHHCCCCBCCCSCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEECSSEEEECCCCCTTCTTCEEECTTSCEEEECCE
T ss_pred ccceeeecCCCcccCCCeEEEecCCCCCcccccceechhccCccCcccchheeeccccCCCCCCCeeEccCCeEEEEEec
Confidence 346777776533 56799999998732 111234445554432211 114678999888999999887
Q ss_pred ee
Q 036586 276 SL 277 (568)
Q Consensus 276 ~~ 277 (568)
+.
T Consensus 189 g~ 190 (215)
T 1p3c_A 189 GY 190 (215)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 142
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.40 E-value=1.6e-07 Score=77.93 Aligned_cols=62 Identities=18% Similarity=0.225 Sum_probs=48.2
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECC
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNS 404 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g 404 (568)
..+++|..|.++|||++ | |++||+|++|||++|.+..... +..++.....++.+.|+|.|.+
T Consensus 26 ~~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 26 GEPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQL--------VVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp TSCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHH--------HHHHHHHHHHHTEEEEEEEECC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhCCCCCeEEEEEEecc
Confidence 35799999999999999 9 9999999999999996543211 3445555434568999999864
No 143
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.39 E-value=2.8e-07 Score=77.38 Aligned_cols=61 Identities=11% Similarity=0.268 Sum_probs=49.1
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .|+.+.|+|.|++.
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQ--------AVETLRN--TGQVVHLLLEKGQS 94 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHH--------HHHHHHS--CCSEEEEEEECCSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEcCCC
Confidence 45899999999999999 9 9999999999999999763210 3334433 68899999999764
No 144
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.39 E-value=2.2e-07 Score=79.07 Aligned_cols=62 Identities=27% Similarity=0.456 Sum_probs=49.7
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.++|||++ ||++||+|++|||++|.++... .+..++.. .|+.+.|+|.|++..
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~r~~~~ 91 (102)
T 2d90_A 29 QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHD--------GVVEMIRK--GGDQTTLLVLDKEAE 91 (102)
T ss_dssp SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHH--------HHHHHHHH--STTEEEEEECSTTCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCEEEEEEEECCCc
Confidence 45899999999999999 9999999999999999986310 03444443 488999999987653
No 145
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.39 E-value=3.3e-07 Score=78.76 Aligned_cols=61 Identities=13% Similarity=0.201 Sum_probs=49.1
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++.. .++.+.|+|.|++.
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNF--------AATVLRN--TKGNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHH--------HHHHHHH--CCSEEEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc--CCCeEEEEEEeCCC
Confidence 46899999999999999 9 9999999999999998765421 2233433 58999999999754
No 146
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.39 E-value=3e-07 Score=82.27 Aligned_cols=62 Identities=13% Similarity=0.155 Sum_probs=51.4
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.+++||++ | |++||+|++|||++|.+.... .+..++.....|+.+.|+|.|++.
T Consensus 65 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFE--------EVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHH--------HHHHHHHHTSSSSEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhcCCCCEEEEEEEcCCC
Confidence 4899999999999999 9 999999999999999875221 145667666678999999999764
No 147
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.38 E-value=4.3e-07 Score=76.11 Aligned_cols=79 Identities=16% Similarity=0.283 Sum_probs=57.2
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHH
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLV 387 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l 387 (568)
...+|+.+........ ....|++|..|.++|||++ | |++||+|++|||++|.++.... +..++
T Consensus 14 ~~~lG~~i~~~~~~~~-------~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~ 78 (97)
T 2iwn_A 14 VQGLGITIAGYIGDKK-------LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQ--------AVEVL 78 (97)
T ss_dssp TTBSCEEEECCCCC-----------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHH--------HHHHH
T ss_pred CCCCcEEEEccCCCCC-------CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH
Confidence 3458888865411100 1146899999999999999 9 9999999999999999864311 22333
Q ss_pred hccCCCCEEEEEEEECCE
Q 036586 388 SQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 388 ~~~~~g~~v~l~V~R~g~ 405 (568)
.. .|+.+.|+|.|+|+
T Consensus 79 ~~--~~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 79 RH--TGQTVLLTLMRRGE 94 (97)
T ss_dssp HT--CCSEEEEEEEEEEE
T ss_pred Hc--CCCeEEEEEEeCCC
Confidence 32 78999999999875
No 148
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.38 E-value=3.9e-07 Score=75.87 Aligned_cols=61 Identities=23% Similarity=0.214 Sum_probs=48.4
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ | |++||+|++|||+++.+..... +..++.. .++.+.|+|.|.+.
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEA--------VAALLKC--SLGTVTLEVGRIST 90 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--CCSEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEcccc
Confidence 35899999999999999 9 9999999999999998754211 2233332 57889999999763
No 149
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=2.3e-07 Score=79.19 Aligned_cols=62 Identities=13% Similarity=0.154 Sum_probs=49.7
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..+++|..|.+++||++ | |++||+|++|||++|.++.... +..++.. .|+.+.|+|.|+|+.
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQ--------AVERIRA--GGPQLHLVIRRPLSG 100 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHH--------HHHHHHH--TCSEEEEEECCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECCCC
Confidence 35899999999999999 9 9999999999999999864211 2333333 588999999998763
No 150
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.38 E-value=4.3e-07 Score=76.34 Aligned_cols=61 Identities=15% Similarity=0.220 Sum_probs=54.5
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHcc-CCCeEEEEEEcCeEE
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESS-EDEFLKFDLEYQQIV 538 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~-~~~~v~l~v~R~~~~ 538 (568)
..|++|..|.+++++.. +++.||+|++|||+++.++.+|.++|+.. ++..+.|++.|+++.
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 65 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRKQ 65 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTEE
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 45789999999888777 78899999999999999999999999987 578999999998864
No 151
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.37 E-value=6.2e-07 Score=74.13 Aligned_cols=62 Identities=15% Similarity=-0.009 Sum_probs=52.6
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHcc-CCCeEEEEEEcCeEEE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESS-EDEFLKFDLEYQQIVV 539 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~-~~~~v~l~v~R~~~~~ 539 (568)
.|+.|..+.+++++...|++.||+|++|||++|.+|.+|.++++.. +++.+.|++.|+|+.+
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~ 81 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQH 81 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTEEE
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 4677888877766677777799999999999999999999999886 4678999999998643
No 152
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=4.4e-07 Score=78.00 Aligned_cols=62 Identities=11% Similarity=0.254 Sum_probs=50.3
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++.. .|+.+.|+|.|++..
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQ--------AVETLRN--TGQVVHLLLEKGQSP 104 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSH--------HHHHHHH--TTSEEEEEEECCCCS
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCcc
Confidence 46899999999999999 9 9999999999999999543321 3344443 589999999998764
No 153
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=4e-07 Score=75.54 Aligned_cols=70 Identities=17% Similarity=0.226 Sum_probs=55.2
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC--CCCCCCEEEEECCEEcC--CCCCCccccCccchHHHH
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH--VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYL 386 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~ 386 (568)
..+|+.+..- ...+++|..|.++|||++ ||++||+|++|||+++. ++.+ +..+
T Consensus 13 ~~lG~~i~~~-------------~~~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~----------~~~~ 69 (88)
T 1kwa_A 13 EPMGITLKMN-------------ELNHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQ----------LQKM 69 (88)
T ss_dssp SCCCEEEECS-------------CGGGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHH----------HHHH
T ss_pred CceeEEEEeC-------------CCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 3578887652 124799999999999998 69999999999999999 5555 5566
Q ss_pred HhccCCCCEEEEEEEECCE
Q 036586 387 VSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 387 l~~~~~g~~v~l~V~R~g~ 405 (568)
+... .+ .+.|+|.|.++
T Consensus 70 l~~~-~~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 70 LREM-RG-SITFKIVPSYR 86 (88)
T ss_dssp HHHC-CE-EEEEEEECCCC
T ss_pred HhcC-CC-cEEEEEECCcC
Confidence 6654 44 89999998765
No 154
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=3.2e-07 Score=80.45 Aligned_cols=61 Identities=16% Similarity=0.224 Sum_probs=48.2
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
.|++|..|.++|||++ | |++||+|++|||++|.+..... +..++.. .++.+.|+|.|+|+.
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~g~~ 115 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEE--------AVAILKR--TKGTVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--CCSSEEEEEEECSCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCcc
Confidence 4899999999999999 8 9999999999999999543210 3334433 456799999999875
No 155
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.35 E-value=2.5e-07 Score=75.59 Aligned_cols=58 Identities=12% Similarity=0.194 Sum_probs=46.4
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .++.+.|+|.|+
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~ 81 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHED--------VVKLIGK--CSGVLHMVIAEG 81 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHH--------HHHHHTT--CSSCEEEEEECC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEcC
Confidence 4799999999999999 99999999999999999883100 3344432 457799999986
No 156
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.34 E-value=5.9e-07 Score=77.59 Aligned_cols=61 Identities=23% Similarity=0.344 Sum_probs=49.3
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
.|++|..|.+++||++ | |++||+|++|||++|.++.... +..++.. .|+.+.|+|.|++..
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQ--------VAQVLRN--CGNSVRMLVARDPAG 100 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHH--------HHHHHHH--HCSEEEEEEEESCTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEeCCCC
Confidence 5899999999999999 9 9999999999999998653211 3444543 478999999997753
No 157
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.34 E-value=2.9e-07 Score=81.66 Aligned_cols=74 Identities=18% Similarity=0.322 Sum_probs=59.8
Q ss_pred eeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCC--CCCCccccCccchHHHHHh
Q 036586 312 ILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 312 ~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~l~ 388 (568)
.+|+.+... . ...|++|..|.++|||++ ||++||+|++|||++|.+ +.+ +..++.
T Consensus 21 g~G~~l~~~-~-----------~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~ 78 (128)
T 2kjd_A 21 GYGFNLHSD-K-----------SKPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGD----------VVSAIR 78 (128)
T ss_dssp SCCEEEEEC-S-----------SSCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHHHH
T ss_pred cccEEEEec-C-----------CCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHH
Confidence 378877654 1 135899999999999999 999999999999999998 444 556666
Q ss_pred ccCCCCEEEEEEEECCEEEE
Q 036586 389 QKYTGDSAVVKVLRNSEVHE 408 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~~~~ 408 (568)
.. .++.+.|+|.|+|+...
T Consensus 79 ~~-~~~~~~l~v~R~g~~~~ 97 (128)
T 2kjd_A 79 AG-GDETKLLVVDRETDEFF 97 (128)
T ss_dssp TT-CSEEEEEEECHHHHHHH
T ss_pred hC-CCCEEEEEEEeCCcceE
Confidence 65 67888999999987654
No 158
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.33 E-value=6.6e-07 Score=78.34 Aligned_cols=61 Identities=11% Similarity=0.148 Sum_probs=48.9
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ | |++||+|++|||+.|.+..... +..++. ..|+.+.|+|.|+++
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEE--------AVAILK--NTSEVVYLKVGKPTT 115 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCc
Confidence 45899999999999999 9 9999999999999998543211 333443 258899999999875
No 159
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.33 E-value=1.9e-07 Score=78.19 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=52.3
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHcc-CCCeEEEEEEcCeEE
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESS-EDEFLKFDLEYQQIV 538 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~-~~~~v~l~v~R~~~~ 538 (568)
|++|..|.+++++.. +++.||+|++|||++|.++++|..+|+.. ++..+.|++.|+++.
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 61 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEKE 61 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESSSCE
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 466788888888777 78899999999999999999999999988 578999999998864
No 160
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.33 E-value=3.3e-07 Score=77.88 Aligned_cols=57 Identities=12% Similarity=0.070 Sum_probs=47.3
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhcc-CCCCEEEEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQK-YTGDSAVVKVL 401 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~~-~~g~~v~l~V~ 401 (568)
..+.+|..|.++|||++ ||++||+|++|||++|. +|.+ +..++... ..|+.+.|.|.
T Consensus 38 ~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~d----------v~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 38 NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSE----------VESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHH----------HHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHH----------HHHHHHHhhccCCeEEEEEe
Confidence 35789999999999999 99999999999999984 7777 55666653 46888888774
No 161
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.32 E-value=8.2e-07 Score=78.42 Aligned_cols=61 Identities=13% Similarity=0.228 Sum_probs=48.7
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
.|++|..|.++|||++ | |++||+|++|||++|.+..... +..++.. .++.+.|+|.|+++.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQN--------ASAIIKT--APSKVKLVFIRNEDA 113 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHH--------HHHHHHH--SCSEEEEEEEECTTH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCCc
Confidence 5899999999999999 9 9999999999999998765411 2223332 467999999998764
No 162
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.32 E-value=5.4e-07 Score=78.07 Aligned_cols=59 Identities=19% Similarity=0.168 Sum_probs=46.8
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.+++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++... .+..+.|+|.|...
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~d----------v~~~i~~~-~~~~v~l~V~~~~~ 105 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSE----------VMKLLKSF-GEDEIEMKVVSLLD 105 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHH----------HHHHHHTT-TTSCEEEEEESCC-
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC-CCCeEEEEEEECCC
Confidence 4789999999999999 9999999999999999965 44 44555442 44569999988543
No 163
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.32 E-value=3e-07 Score=79.73 Aligned_cols=64 Identities=9% Similarity=0.178 Sum_probs=51.2
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHE 408 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~ 408 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++.. .|+.+.|+|.|+++..+
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~~~ 99 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSF--------AASVLRN--TKGRVRFMIGRERPGEQ 99 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHH--------HHHHHHH--SCSSCEEEEEECCCCTT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc--CCCeEEEEEEeCCCCCc
Confidence 46899999999999999 9 9999999999999998765411 2233333 48899999999987543
No 164
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.32 E-value=7.4e-07 Score=79.35 Aligned_cols=62 Identities=13% Similarity=0.184 Sum_probs=51.4
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.++|||++ | |++||+|++|||+.|.++... .+..++.....|+.+.|+|.|++.
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHA--------QVVKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHH--------HHHHHHHHSCTTEEEEEEEEECSC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCeEEEEEEeCCC
Confidence 4799999999999999 9 999999999999999875421 155667666568999999999863
No 165
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.31 E-value=4.1e-07 Score=78.48 Aligned_cols=64 Identities=14% Similarity=0.218 Sum_probs=49.1
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccC-CCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKY-TGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~-~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.++|||++ | |++||+|++|||+.+.+...- .+..++.... .++.+.|+|.|.++.
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~~~~~~~~~v~l~v~R~~~~ 98 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSND--------DAVRVLRDIVHKPGPIVLTVAKSGGG 98 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHH--------HHHHHHHHHHTSSSCEEEEEECCCC-
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhcccCCCeEEEEEEeCCCC
Confidence 46899999999999999 9 999999999999999984210 0445555541 234699999997653
No 166
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.31 E-value=7.2e-07 Score=76.84 Aligned_cols=56 Identities=14% Similarity=0.245 Sum_probs=47.1
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++.. .|+.+.|+|.|.
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~----------~~~~l~~--~~~~v~l~v~~~ 103 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQ----------VVNMIRQ--GGNTLMVKVVMV 103 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHH----------HHHHHHH--TTTEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHh--CCCEEEEEEEEC
Confidence 4899999999999999 9999999999999999998 33 3445544 378899999874
No 167
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.31 E-value=1.7e-07 Score=82.50 Aligned_cols=62 Identities=18% Similarity=0.227 Sum_probs=49.0
Q ss_pred CceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEE
Q 036586 336 KGVRIRRIEPTAPESH--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVH 407 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~ 407 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .++++.|+|.|+|+..
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~r~g~~~ 116 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQ--------AVNLLKN--ASGSIEMQVVAGGDVS 116 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHH--------HHHHHHH--CCSEEEEEEECCTTSS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECCccc
Confidence 4899999999999986 89999999999999998864311 2233333 4778999999988653
No 168
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.31 E-value=7.6e-07 Score=78.14 Aligned_cols=100 Identities=18% Similarity=0.127 Sum_probs=66.3
Q ss_pred ccccccccchhhhHhHHHhhhcCccccCceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEE
Q 036586 283 ENIGYVIPTPVIIHFIQDYEKNGAYTGFPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIIL 360 (568)
Q Consensus 283 ~~~~~aIP~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl 360 (568)
...+++.|....+.+. |.+. ...+|+.+..-... -......|++|..|.++|||++ | |++||+|+
T Consensus 7 ~~~g~~~~~~~~~~v~--l~r~-----~~~lG~~i~~~~~~------~~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il 73 (120)
T 2eno_A 7 GMNGRVDYLVTEEEIN--LTRG-----PSGLGFNIVGGTDQ------QYVSNDSGIYVSRIKENGAAALDGRLQEGDKIL 73 (120)
T ss_dssp CCSSCCCEEEEEEEEE--EECC-----SSSCSEEEECCTTT------CSSSSCCSEEEEEECSSSHHHHSCCSCTTCEEE
T ss_pred CcCCCCCCCCceEEEE--EEEC-----CCCCCEEEecccCC------ccccCCCCEEEEEECCCChHHHCCCCCCCCEEE
Confidence 3445666655444332 2222 14588888653110 0011246899999999999999 9 99999999
Q ss_pred EECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 361 SFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 361 ~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
+|||++|.++.... +..++.. .++.+.|+|.|++.
T Consensus 74 ~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 74 SVNGQDLKNLLHQD--------AVDLFRN--AGYAVSLRVQHRLQ 108 (120)
T ss_dssp EETTEECCSCCHHH--------HHHHHHH--HCSEEEEEEEEEEE
T ss_pred EECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCc
Confidence 99999999876211 2334433 47899999999776
No 169
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.30 E-value=4e-07 Score=77.92 Aligned_cols=61 Identities=18% Similarity=0.301 Sum_probs=48.4
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++.. .++.+.|+|.|++.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDH--------AVSLLTA--ASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHH--------HHHHHTS--CCSCEEEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECCC
Confidence 35899999999999999 9 9999999999999998753210 3334433 47889999999754
No 170
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.30 E-value=7.8e-07 Score=71.81 Aligned_cols=58 Identities=17% Similarity=0.228 Sum_probs=49.4
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+ ++.||+|++|||+++. +++++.++++...+ .+.+.+.|++
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~R~g 81 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSKG-KLKMVVQRDE 81 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTSTT-EEEEEEEC--
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCC-eEEEEEEeCC
Confidence 458999999988776667 7799999999999999 99999999998654 8999999875
No 171
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.30 E-value=2e-07 Score=77.87 Aligned_cols=54 Identities=11% Similarity=0.156 Sum_probs=44.8
Q ss_pred ceEEEEecCCCcccC-CCCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 337 GVRIRRIEPTAPESH-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 337 Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
| +|..|.++|||++ ||++||+|++|||++|. ++.+ +..++.. .|+.+.|+|.+.
T Consensus 33 G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~----------~~~~l~~--~g~~v~l~v~p~ 89 (90)
T 1y7n_A 33 G-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEK----------IVHILSN--AVGEIHMKTMPA 89 (90)
T ss_dssp T-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHH----------HHHHHHH--CCEEEEEEEECC
T ss_pred C-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCeEEEEEEEC
Confidence 5 8999999999999 99999999999999995 4444 5566653 478899998764
No 172
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.30 E-value=6.1e-07 Score=76.45 Aligned_cols=60 Identities=22% Similarity=0.402 Sum_probs=48.1
Q ss_pred CCceEEEEecCCCcccCCCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECC
Q 036586 335 QKGVRIRRIEPTAPESHVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNS 404 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g 404 (568)
..|++|..|.++|||++||++||+|++|||++|.+..... +..++. ..|+.+.|+|.|+.
T Consensus 42 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 42 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLLK--TFQNTVELIIVREV 101 (103)
T ss_dssp CCSEECCCBSSSSTTSSSCCTTCEEEEETTEECSSCCHHH--------HHHHHH--HCCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCchHHCCCCCCEEEEECCEECCCCCHHH--------HHHHhh--cCCCeEEEEEEecC
Confidence 4689999999999998899999999999999998865411 222332 35889999999863
No 173
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.29 E-value=4.3e-07 Score=76.53 Aligned_cols=60 Identities=15% Similarity=0.156 Sum_probs=47.3
Q ss_pred CCceEEEEecCCCcccCCCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECC
Q 036586 335 QKGVRIRRIEPTAPESHVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNS 404 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g 404 (568)
..+++|..|.++|||+.||++||+|++|||++|.+..... +..++.. .|+.+.|+|.|++
T Consensus 30 ~~~~~V~~V~~~spA~agL~~GD~Il~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~ 89 (96)
T 2edv_A 30 SLPLTVVAVTAGGSAHGKLFPGDQILQMNNEPAEDLSWER--------AVDILRE--AEDSLSITVVRCT 89 (96)
T ss_dssp SSSCBCCCBCSSSSSTTTSCTTCBEEEESSCBSTTCCHHH--------HHHHHHH--CSSCEEEEEEECC
T ss_pred CCCeEEEEECCCCchhhCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECC
Confidence 3589999999999995599999999999999998764311 2223332 6899999999976
No 174
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.27 E-value=1.3e-06 Score=71.86 Aligned_cols=59 Identities=14% Similarity=0.162 Sum_probs=53.6
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||+++.+ ++++.++|+..+ +.+.|.+.|++.
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~ 86 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SPLRLQLDRITS 86 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEecCC
Confidence 46899999999888777888999999999999999 899999999987 889999999874
No 175
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=98.26 E-value=1.9e-05 Score=76.50 Aligned_cols=128 Identities=16% Similarity=0.192 Sum_probs=83.2
Q ss_pred ceEEEEEEeCCEEEEcccccCCC--CeEEEEEc-----CCCcEEEEEEEEEeCC-----CCeEEEEeccCc-cccCccce
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH--TQVKVKKR-----GSDTKYLATVLSIGTE-----CDIALLTVKDDE-FWEGVSPV 216 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~--~~i~V~~~-----~dg~~~~a~vv~~d~~-----~DlAlLkv~~~~-~~~~l~~~ 216 (568)
...+|.+|++.+|||+||++.+. ..+.|.+. .++..+..+-+..|+. .|||||+++... +...+.|+
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~~~~~~~v~pi 103 (224)
T 1pq7_A 24 PWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIGYA 103 (224)
T ss_dssp EEEEEEEEETTEEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTCCEEEEESSCCCCBTTBCCC
T ss_pred eEEEEEEecCCEEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCCCcCCCcccce
Confidence 56999999999999999999853 45777762 1244566665666775 599999998653 22346777
Q ss_pred ecCC---CcccCCeEEEEecCCCCC--------CceEEEEEEeeeec------c---------c---------ccCCCce
Q 036586 217 EFGD---LPALQDAVTVVGYPIGGD--------TISVTSGVVSRMEI------L---------S---------YVHGSTE 261 (568)
Q Consensus 217 ~l~~---~~~~g~~V~aiG~P~g~~--------~~svt~GiIs~~~~------~---------~---------~~~ggsp 261 (568)
.|.. ....++.+++.|+..... ...+..-+++.-.. . . ..++|||
T Consensus 104 cL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 183 (224)
T 1pq7_A 104 RLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGGP 183 (224)
T ss_dssp CBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCE
T ss_pred ecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCCcc
Confidence 7763 224678999999854311 11222233322100 0 0 0136779
Q ss_pred eecccceEEEEEeeee
Q 036586 262 LLGLQGKCVGIAFQSL 277 (568)
Q Consensus 262 L~n~~G~VVGI~~~~~ 277 (568)
|+..+|.++||++.+.
T Consensus 184 L~~~~g~l~Gi~S~g~ 199 (224)
T 1pq7_A 184 IVDSSNTLIGAVSWGN 199 (224)
T ss_dssp EECTTCCEEEEEEECS
T ss_pred eECcCCeEEEEEEeCC
Confidence 9988899999998753
No 176
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.25 E-value=7.5e-07 Score=73.96 Aligned_cols=73 Identities=16% Similarity=0.265 Sum_probs=50.5
Q ss_pred eeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhcc
Q 036586 312 ILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQK 390 (568)
Q Consensus 312 ~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~ 390 (568)
.+|+.+... . ...|++|..|.++|||++ ||++||+|++|||++|.+..... +..++...
T Consensus 15 g~G~~~~~~-~-----------~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~--------~~~~l~~~ 74 (91)
T 1g9o_A 15 GYGFHLHGE-K-----------GKLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQ--------VVSRIRAA 74 (91)
T ss_dssp BCCEEEEEC-T-----------TCSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHH--------HHHHHHTC
T ss_pred cccEEEEec-C-----------CCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHcC
Confidence 377777554 1 135899999999999999 99999999999999998854311 33444432
Q ss_pred CCCCEEEEEEEECCE
Q 036586 391 YTGDSAVVKVLRNSE 405 (568)
Q Consensus 391 ~~g~~v~l~V~R~g~ 405 (568)
.+..+.+.+.|+++
T Consensus 75 -~~~~~~~~~~r~~~ 88 (91)
T 1g9o_A 75 -LNAVRLLVVDPETD 88 (91)
T ss_dssp -SSEEEEEEECCCCS
T ss_pred -CCcEEEEEEcCCcc
Confidence 34444445555554
No 177
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=6.2e-07 Score=77.94 Aligned_cols=58 Identities=28% Similarity=0.409 Sum_probs=49.6
Q ss_pred ceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 337 GVRIRRIEPTAPESH--VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 337 Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
+++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++.. .|+.+.|+|.|+++.
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHAD----------IVKLIKD--AGLSVTLRIIPQEEL 105 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHH----------HHHHHHH--TTTEEEEEECCCSCC
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCeEEEEEEeCCcC
Confidence 679999999999997 8999999999999999885 44 5566664 689999999998763
No 178
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.24 E-value=5.9e-07 Score=76.25 Aligned_cols=60 Identities=17% Similarity=0.250 Sum_probs=47.5
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.+++|..|.++|||++ ||++||+|++|||++|.++... .+..++.. .++.+.|+|.|++.
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~--------~~~~~l~~--~~~~v~l~v~R~~~ 96 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCV--------ELAHEIRS--CPSEIILLVWRVSG 96 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHH--------HHHHHHHH--CSSEEEEEEEECCS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCeEEEEEEECCC
Confidence 5799999999999999 9999999999999999975321 03445544 35679999999753
No 179
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.24 E-value=9.4e-07 Score=74.37 Aligned_cols=51 Identities=20% Similarity=0.260 Sum_probs=41.5
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCC
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDG 371 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~ 371 (568)
..+|+.+..+ ++. ...|++|..|.++|||++ ||++||+|++|||++|.++.
T Consensus 20 ~~~Gf~v~~~-~~~---------~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~ 71 (94)
T 3kzd_A 20 DTYGFSLSSV-EED---------GIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALN 71 (94)
T ss_dssp -CCSEEEEEE-CSS---------SSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCC
T ss_pred CCcCEEEEec-CCC---------CcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 3578888776 221 135899999999999999 99999999999999999753
No 180
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.24 E-value=1.8e-06 Score=72.76 Aligned_cols=79 Identities=14% Similarity=0.084 Sum_probs=59.8
Q ss_pred EEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHccCC-CeEEEEEEcCe-----EEEEeccch--HhHhHh
Q 036586 480 VVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSED-EFLKFDLEYQQ-----IVVLKSKTA--KEATSD 551 (568)
Q Consensus 480 vvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~~~-~~v~l~v~R~~-----~~~l~~~~~--~~~~~~ 551 (568)
.+|..|.+++++...|++.||+|++|||++|.+|++|..+|....+ +.+.|++.|++ ...|+-.+. ....++
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~~~~~~~~~~~ 83 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKED 83 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECTTCCCCTTTSC
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECCCCceEEEEEEccccccCCCCCC
Confidence 3688899998888888889999999999999999999999988765 68999999986 234443333 223445
Q ss_pred HHHhcCC
Q 036586 552 ILATHCI 558 (568)
Q Consensus 552 i~~~~~i 558 (568)
.+...+|
T Consensus 84 ~l~~lGl 90 (95)
T 3id1_A 84 PVSSLGI 90 (95)
T ss_dssp HHHHTTE
T ss_pred HHHHcCc
Confidence 5555544
No 181
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.24 E-value=2e-06 Score=88.45 Aligned_cols=84 Identities=15% Similarity=0.083 Sum_probs=68.9
Q ss_pred eeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCC
Q 036586 433 IIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN 512 (568)
Q Consensus 433 ~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~ 512 (568)
.|+|+.++.+. +.+++.++. +...+++|..|.+++++...|++.||+|++|||++|.+
T Consensus 221 ~~lGi~~~~~~-~~~~~~~g~---------------------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~ 278 (318)
T 1te0_A 221 GYIGIGGREIA-PLHAQGGGI---------------------DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAIS 278 (318)
T ss_dssp EECCEEEEECS-CCCSSSSCS---------------------SSCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCC
T ss_pred ccceeEeeecc-hhHHHhccC---------------------CCCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCC
Confidence 47899888877 333334442 23467999999999998888888999999999999999
Q ss_pred HHHHHHHHHc-cCCCeEEEEEEcCeEE
Q 036586 513 LKSLADMVES-SEDEFLKFDLEYQQIV 538 (568)
Q Consensus 513 l~~f~~~l~~-~~~~~v~l~v~R~~~~ 538 (568)
+.+|.++|+. .+++.+.|++.|+++.
T Consensus 279 ~~~l~~~l~~~~~g~~v~l~v~R~g~~ 305 (318)
T 1te0_A 279 ALETMDQVAEIRPGSVIPVVVMRDDKQ 305 (318)
T ss_dssp HHHHHHHHHTSCTTCEEEEEEESSSCE
T ss_pred HHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 9999999997 4678999999998864
No 182
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.24 E-value=1.1e-06 Score=72.90 Aligned_cols=60 Identities=15% Similarity=0.150 Sum_probs=52.5
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEec--CCHHHHHHHHHcc-CCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPV--QNLKSLADMVESS-EDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV--~~l~~f~~~l~~~-~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...|++.||+|++|||++| .++++|.++|+.. +++.+.|++.|+++
T Consensus 28 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGK 90 (90)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC-
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 358999999998887778889999999999999 8999999999875 57799999999763
No 183
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.24 E-value=5.5e-07 Score=80.03 Aligned_cols=80 Identities=15% Similarity=0.150 Sum_probs=57.7
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHh
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~ 388 (568)
..||+.+... ... ... ...|++|..|.+++||++ | |++||+|++|||+.|.+..... +..++.
T Consensus 37 ~glG~~i~~~-~~~-----~~~-~~~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~ 101 (127)
T 1wg6_A 37 AGLGVSLKGN-KSR-----ETG-TDLGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHE--------AMETLR 101 (127)
T ss_dssp TCCCCEEEEE-EET-----TTT-EEEEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHH--------HHHHHH
T ss_pred CccCeEEecc-cCC-----CCC-CCCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 4578887654 111 011 124899999999999999 8 9999999999999998865210 344555
Q ss_pred cc-----CCCCEEEEEEEECCE
Q 036586 389 QK-----YTGDSAVVKVLRNSE 405 (568)
Q Consensus 389 ~~-----~~g~~v~l~V~R~g~ 405 (568)
.. ..++.|.|+|.|++.
T Consensus 102 ~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 102 RSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp HHHHHHHHHTCEEEEEEEECSC
T ss_pred HhhccccCCCCEEEEEEEeCCC
Confidence 43 247899999999875
No 184
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.23 E-value=3.5e-07 Score=77.75 Aligned_cols=60 Identities=13% Similarity=0.192 Sum_probs=48.7
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.++|||++ | |++||+|++|||++|.++.... +..++. ..|+.+.|+|.|+++
T Consensus 36 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHAR--------AIELIK--SGGRRVRLLLKRGTG 97 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHH--------HHHHHH--HHCSEECEEEECTTC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECCC
Confidence 4899999999999999 9 9999999999999999864311 223333 357899999999876
No 185
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.23 E-value=4.5e-07 Score=79.37 Aligned_cols=57 Identities=25% Similarity=0.359 Sum_probs=48.3
Q ss_pred ceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCC--CCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 337 GVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 337 Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
+++|..|.+++||++ | |++||+|++|||++|.+ +.+ +..++. ..|+.+.|+|.|+++
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~----------~~~~l~--~~g~~v~l~v~r~~~ 103 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLE----------ATKLLA--SISEKVRLEILPVPQ 103 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHH----------HHHHHH--SCSSEEEEEECCBTT
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHH--hCCCeEEEEEEECCC
Confidence 599999999999999 9 99999999999999954 443 455565 368999999999875
No 186
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.23 E-value=1.9e-06 Score=92.49 Aligned_cols=69 Identities=16% Similarity=0.341 Sum_probs=60.1
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEEEEEEec
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHEFNIKLS 414 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~v~v~l~ 414 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++.+ |..++.. .++.+.|+|.|+|+.+.+.+...
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~----------~~~~l~~--~~~~v~l~v~R~g~~~~~~~~~~ 430 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAE----------MRKVLAA--KPAIIALQIVRGNESIYLLMRLE 430 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHH----------HHHHHHh--CCCeEEEEEEECCEEEEEEEEec
Confidence 5899999999999999 999999999999999999988 6677766 34589999999999988887765
Q ss_pred cC
Q 036586 415 TH 416 (568)
Q Consensus 415 ~~ 416 (568)
.+
T Consensus 431 ~~ 432 (436)
T 4a8c_A 431 HH 432 (436)
T ss_pred cc
Confidence 44
No 187
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=98.22 E-value=2.9e-05 Score=75.76 Aligned_cols=84 Identities=15% Similarity=0.190 Sum_probs=58.4
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeC------------------CCCeEEEE
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGT------------------ECDIALLT 203 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~------------------~~DlAlLk 203 (568)
...+|.+|++.+|||+||++. ..+.|.+.. .+..+..+-+..|| ..|||||+
T Consensus 24 ~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~ 101 (237)
T 1gvz_A 24 FQCGGVLVHPQWVLTAAHCMS--DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLR 101 (237)
T ss_dssp EEEEEEEEETTEEEECGGGCC--SSCEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSCCTTCCEEEE
T ss_pred eEEEeEEeeCCEEEEcHHhCC--CCCeEEEeecccccCCCCceEEEeeeEecCCccCcccccccccccccccCCceEEEE
Confidence 468999999999999999997 344555421 13344455455555 67999999
Q ss_pred eccCc-cccCccceecCCCc-ccCCeEEEEecCC
Q 036586 204 VKDDE-FWEGVSPVEFGDLP-ALQDAVTVVGYPI 235 (568)
Q Consensus 204 v~~~~-~~~~l~~~~l~~~~-~~g~~V~aiG~P~ 235 (568)
++... +...+.|+.|.... ..++.+.++|+..
T Consensus 102 L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~ 135 (237)
T 1gvz_A 102 LAQPARITDAVKILDLPTQEPKLGSTCYTSGWGL 135 (237)
T ss_dssp ESSCCCCBTTBCCCCCCSSCCCTTCEEEEEEEEC
T ss_pred eCCCcccCCcEeeeECCCCCCCCCCEEEEECCCc
Confidence 98653 23356777776533 5678899988754
No 188
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.22 E-value=1.8e-07 Score=82.96 Aligned_cols=59 Identities=12% Similarity=0.236 Sum_probs=49.5
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ ||++||+|++|||++|. ++.+ +..++.. .|+.+.|+|.|+++
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQ----------VIALIQN--SDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHH----------HHHHHHT--CTTEEEEECCCCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCEEEEEEEECCC
Confidence 46899999999999999 99999999999999998 4443 4455554 48999999999875
No 189
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.21 E-value=5.7e-07 Score=74.57 Aligned_cols=65 Identities=22% Similarity=0.308 Sum_probs=47.1
Q ss_pred hcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 328 SMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 328 ~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
.+|+.. ..|++|..|.++|||++ | |++||+|++|||+.+.+...-. +..++.. .++++.|++.+.
T Consensus 14 ~~G~~~-~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~i~~--~~~~v~L~v~~~ 80 (88)
T 3e17_A 14 EYGLRL-GSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTD--------ARKLIEK--SRGKLQLVVLRD 80 (88)
T ss_dssp CCCEEE-EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--TTTEEEEEECCC
T ss_pred CCCEEE-eCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEeCC
Confidence 344443 34899999999999999 9 9999999999999995443200 3455554 356788877653
No 190
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.21 E-value=8.8e-07 Score=77.07 Aligned_cols=61 Identities=20% Similarity=0.249 Sum_probs=49.0
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
.|++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .++.+.|+|.|+++.
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEE--------AITALRQ--TPQKVRLVVYRDEAH 105 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHH--------HHHHHHT--CCSEEEEEEECCSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEeCCcc
Confidence 5899999999999999 9 9999999999999999864210 3334433 458999999998864
No 191
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.21 E-value=1.1e-06 Score=75.39 Aligned_cols=60 Identities=22% Similarity=0.332 Sum_probs=46.7
Q ss_pred CceEEEEecCCCcccC-C--CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCC--CCEEEEEEEEC
Q 036586 336 KGVRIRRIEPTAPESH-V--LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYT--GDSAVVKVLRN 403 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G--L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~--g~~v~l~V~R~ 403 (568)
.+++|..|.++|||++ | |++||+|++|||++|.++.... +..++..... +..+.|+|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~--------~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQ--------VVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHH--------HHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHH--------HHHHHHhccccCCcEEEEEEEcC
Confidence 4799999999999999 9 9999999999999999875421 2334443322 35899999875
No 192
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.20 E-value=9.7e-07 Score=75.66 Aligned_cols=59 Identities=14% Similarity=0.241 Sum_probs=47.0
Q ss_pred ceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 337 GVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 337 Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
+++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .|+.+.|+|.|.+.
T Consensus 44 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQ--------VVDLIRA--GEKELILTVLSVES 103 (107)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--CSSEEEEEEECSSC
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCEEEEEEEcCCC
Confidence 457999999999999 99999999999999999543211 4455543 58899999999764
No 193
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.20 E-value=6.7e-06 Score=86.82 Aligned_cols=85 Identities=15% Similarity=0.189 Sum_probs=64.0
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHh
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 388 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~ 388 (568)
+..+|+.+... . ....+++|..|.++|||++ ||++||+|++|||++|.++..- .+..++.
T Consensus 84 ~~giG~~~~~~-~----------~~~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~--------~~~~~l~ 144 (388)
T 1fc6_A 84 VTGVGLEITYD-G----------GSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLY--------DVSDLLQ 144 (388)
T ss_dssp CBBCSEEEEEC-T----------TCSSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH--------HHHHHHC
T ss_pred eEEEEEEEEEe-e----------cCCCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHh
Confidence 34588887654 1 1146899999999999999 9999999999999999987310 0344554
Q ss_pred ccCCCCEEEEEEEECCE---EEEEEEEec
Q 036586 389 QKYTGDSAVVKVLRNSE---VHEFNIKLS 414 (568)
Q Consensus 389 ~~~~g~~v~l~V~R~g~---~~~v~v~l~ 414 (568)
...|+.+.|+|.|+|+ .++++++..
T Consensus 145 -~~~g~~v~l~v~r~g~~~~~~~~~l~r~ 172 (388)
T 1fc6_A 145 -GEADSQVEVVLHAPGAPSNTRTLQLTRQ 172 (388)
T ss_dssp -BSTTCEEEEEEEETTEEEEEEEEEEECB
T ss_pred -cCCCCEEEEEEEeCCCCcceEEEEEEEc
Confidence 3478999999999998 566666543
No 194
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.20 E-value=3.6e-07 Score=79.07 Aligned_cols=61 Identities=20% Similarity=0.220 Sum_probs=47.9
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++. ..++.+.|+|.|+..
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGE--------AVQLLR--SVGDTLTVLVCDGFE 105 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHH--------HHHHHS--SCSSEEEECCCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECCC
Confidence 46899999999999999 9 9999999999999998653210 223333 267899999988653
No 195
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.20 E-value=1.4e-06 Score=72.29 Aligned_cols=59 Identities=14% Similarity=0.206 Sum_probs=51.9
Q ss_pred EEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 480 VVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 480 vvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
++|..|.+++++...+++.||+|++|||+++.+|++|..++...+++.+.|++.|+++.
T Consensus 6 ~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~g~~ 64 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVRDNPGXSLALEIERQGSP 64 (91)
T ss_dssp CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHHHCTTCCEEEEEEETTEE
T ss_pred eEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHhcCCCCeEEEEEEECCeE
Confidence 46778888887776677799999999999999999999999988788999999998864
No 196
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=98.19 E-value=3.8e-05 Score=74.30 Aligned_cols=85 Identities=14% Similarity=0.206 Sum_probs=59.0
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
...+|.+|++.+|||+||++. ..+.|.+.. +...+..+-+..||. .|||||+++... +...+
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v 100 (223)
T 3mfj_A 23 HFCGGSLINSQWVVSAAHCYK--SGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRV 100 (223)
T ss_dssp EEEEEEEEETTEEEECGGGCC--SSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEecCCEEEEhHHhcC--CCcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeCCCcccCCcE
Confidence 469999999999999999995 445555521 133445544445653 599999998653 22357
Q ss_pred cceecCCCc-ccCCeEEEEecCCC
Q 036586 214 SPVEFGDLP-ALQDAVTVVGYPIG 236 (568)
Q Consensus 214 ~~~~l~~~~-~~g~~V~aiG~P~g 236 (568)
.|+.|.... ..++.+++.|+...
T Consensus 101 ~picL~~~~~~~~~~~~v~GwG~~ 124 (223)
T 3mfj_A 101 ASISLPTSCASAGTQCLISGWGNT 124 (223)
T ss_dssp CCCBCCSSCCCTTCEEEEEESSCC
T ss_pred eeeECCCCCCCCCCEEEEEeeecc
Confidence 788886533 56789999998543
No 197
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=98.19 E-value=2.2e-05 Score=76.21 Aligned_cols=86 Identities=23% Similarity=0.285 Sum_probs=60.7
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcCC--------CcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGS--------DTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~d--------g~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
..++|.+|++.+|||+||++.....+.|.+... ...+..+-+..++. .|||||+++... +...+
T Consensus 25 ~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v 104 (228)
T 1fxy_A 25 GFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNV 104 (228)
T ss_dssp EEEEEEECSSSEEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTB
T ss_pred eeEEEEEeeCCEEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcccCCCce
Confidence 469999999999999999997666667766211 12345555555653 599999998653 22356
Q ss_pred cceecCCCc-ccCCeEEEEecCC
Q 036586 214 SPVEFGDLP-ALQDAVTVVGYPI 235 (568)
Q Consensus 214 ~~~~l~~~~-~~g~~V~aiG~P~ 235 (568)
.|+.|.... ..++.+++.|+..
T Consensus 105 ~picLp~~~~~~~~~~~v~GwG~ 127 (228)
T 1fxy_A 105 APASLPTAPPATGTKCLISGWGN 127 (228)
T ss_dssp CCCCCCSSCCCTTCEEEEEESSC
T ss_pred eccCCCCCCCCCCCEEEEEecCc
Confidence 777776533 5678999999754
No 198
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.19 E-value=2.1e-06 Score=71.11 Aligned_cols=57 Identities=23% Similarity=0.219 Sum_probs=45.1
Q ss_pred CceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEE
Q 036586 336 KGVRIRRIEPTAPESH--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLR 402 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R 402 (568)
.|++|..|.++|||++ ||++||+|++|||++|.+..... +..++. ..++.+.|+|.|
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~r 88 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDE--------AVQALK--KTGKEVVLEVKY 88 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCeEEEEEEE
Confidence 5899999999999996 79999999999999999764311 122332 357889999987
No 199
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.18 E-value=3.6e-06 Score=70.54 Aligned_cols=60 Identities=7% Similarity=0.016 Sum_probs=53.7
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
..+++|..|.+++++...|++.||+|++|||++|.+ ++++.++++.. +..+.|++.|++.
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 90 (96)
T 2v90_A 29 RPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQ-GSCVSLTVVDPEA 90 (96)
T ss_dssp CEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEEECCCT
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEECCCC
Confidence 357999999999888877788999999999999999 89999999986 7899999999864
No 200
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.18 E-value=1.7e-06 Score=75.53 Aligned_cols=61 Identities=26% Similarity=0.377 Sum_probs=47.9
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++. ..|+.+.|+|.|...
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSE--------AVEAIK--NAGNPVVFIVQSLSS 111 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHH--------HHHHHH--TSCSSEEEEECCBSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECCC
Confidence 36899999999999999 9 9999999999999998765311 222333 357889999988543
No 201
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.18 E-value=7.8e-07 Score=78.96 Aligned_cols=60 Identities=22% Similarity=0.241 Sum_probs=47.7
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcC-CCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIA-NDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~-~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.+++||++ | |++||+|++|||++|. ..... .+..++.. .++.+.|+|.|+..
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~~l~~--~~~~v~l~v~r~~~ 116 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQ--------QAIALLQQ--TTGSLRLIVAREPV 116 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHH--------HHHHHHHH--CCSEEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHH--------HHHHHHHc--CCCeEEEEEEcCCC
Confidence 4899999999999999 9 9999999999999997 33210 03344443 67899999999753
No 202
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.17 E-value=1.4e-06 Score=72.46 Aligned_cols=60 Identities=20% Similarity=0.267 Sum_probs=47.0
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECC
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNS 404 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g 404 (568)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .++.+.|+|.|++
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~r~~ 90 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEK--------AVELLKA--AQGSVKLVVRSGP 90 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHH--------HHHHHHH--CCSEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCcEEEEEEeCC
Confidence 45899999999999999 7 9999999999999999763210 2333433 4578999999865
No 203
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.17 E-value=1.7e-06 Score=71.78 Aligned_cols=59 Identities=12% Similarity=0.164 Sum_probs=53.3
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCHH--HHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLK--SLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~--~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|.++. ++..+++. ++..+.|++.|+++
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~g~ 87 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKG-CTDNLTLTVARSEH 87 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEEECC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECCc
Confidence 4689999999988877778899999999999999998 99999998 78899999999875
No 204
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.17 E-value=1e-06 Score=83.25 Aligned_cols=62 Identities=16% Similarity=0.226 Sum_probs=51.2
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCC--CCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVHE 408 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~~ 408 (568)
..|++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..++.. .++.+.|+|.|++....
T Consensus 129 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~----------~~~~l~~--~~~~v~l~v~R~~~~~~ 194 (196)
T 3gsl_A 129 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHED----------AVAALKN--TYDVVYLKVAKPSNAET 194 (196)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHH----------HHHHHHS--CCEEEEEEEEEESCCCE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHH----------HHHHHHc--CCCeEEEEEeCCCCccc
Confidence 35899999999999999 9 99999999999999998 443 4455543 47899999999887543
No 205
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=98.17 E-value=3.5e-05 Score=74.23 Aligned_cols=152 Identities=13% Similarity=0.129 Sum_probs=87.8
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEc------CCCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCccc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKR------GSDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGVSP 215 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~------~dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~ 215 (568)
...+|.+|++.+|||+||++.....+.+-.. .....+..+-+..+|. .|||||+++... +...+.|
T Consensus 23 ~~C~GtLI~~~~VLTAAhC~~~~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~p 102 (223)
T 4i8h_A 23 HFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVAS 102 (223)
T ss_dssp EEEEEEECSSSEEEECGGGCCSSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCC
T ss_pred cEEEEEEEcCCEEEecHHhCCCCcEEEEccccccccCCCcEEEEEeEEEECcCCCCCCCcCCEEEEEECCcCcCCCceec
Confidence 4599999999999999999986433333211 1223345554556663 599999998653 2345677
Q ss_pred eecCCC-cccCCeEEEEecCCCCCC-----ceEEEEEEeeeecc-----------------c---------ccCCCceee
Q 036586 216 VEFGDL-PALQDAVTVVGYPIGGDT-----ISVTSGVVSRMEIL-----------------S---------YVHGSTELL 263 (568)
Q Consensus 216 ~~l~~~-~~~g~~V~aiG~P~g~~~-----~svt~GiIs~~~~~-----------------~---------~~~ggspL~ 263 (568)
+.|... ...++.+.+.|+...... ..+....+.-+... . ..++||||+
T Consensus 103 i~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~ 182 (223)
T 4i8h_A 103 ISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVV 182 (223)
T ss_dssp CBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTCEEE
T ss_pred eECCCCCCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCCCCCCCeEeccCCCCCCccCCCCCCCcEE
Confidence 777653 356799999998543210 01111211111100 0 013677999
Q ss_pred cccceEEEEEeeeecCCCCccccccccchhhhHhHHHhh
Q 036586 264 GLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYE 302 (568)
Q Consensus 264 n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 302 (568)
- +++++||.+.+..-......+....+...++++++..
T Consensus 183 ~-~~~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i 220 (223)
T 4i8h_A 183 C-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220 (223)
T ss_dssp E-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred E-CCEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 7 5799999987542111122333444555555555543
No 206
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.17 E-value=2.1e-06 Score=73.68 Aligned_cols=61 Identities=21% Similarity=0.344 Sum_probs=47.6
Q ss_pred CCceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ ||++||+|++|||++|.+..... +..++.. .++.+.|+|.|++.
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQ--------AVEAFKT--AKEPIVVQVLRRTS 102 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHH--------HHHHHHH--CCSSEEEEEEECCS
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCcEEEEEEeCCC
Confidence 46899999999999987 79999999999999997754311 2233332 57889999999753
No 207
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=98.17 E-value=4.3e-05 Score=73.91 Aligned_cols=85 Identities=21% Similarity=0.255 Sum_probs=58.6
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEc--------CCCcEEEEEEEEEeC-------CCCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKR--------GSDTKYLATVLSIGT-------ECDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~--------~dg~~~~a~vv~~d~-------~~DlAlLkv~~~~-~~~~l 213 (568)
...+|.+|++.+|||+||++.. .+.|.+. .....+..+-+..|| ..|||||+++.+. +...+
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v 100 (222)
T 1hj8_A 23 HFCGGSLVNENWVVSAAHCYKS--RVEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYV 100 (222)
T ss_dssp EEEEEEEEETTEEEECGGGCCS--SCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCSSSC
T ss_pred cEEEeEEecCCEEEECHHhcCC--CeEEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCCce
Confidence 4699999999999999999974 3445441 112345554455555 3599999998653 22346
Q ss_pred cceecCCC-cccCCeEEEEecCCC
Q 036586 214 SPVEFGDL-PALQDAVTVVGYPIG 236 (568)
Q Consensus 214 ~~~~l~~~-~~~g~~V~aiG~P~g 236 (568)
.|+.|... ...++.+.+.|+...
T Consensus 101 ~picL~~~~~~~~~~~~v~GwG~~ 124 (222)
T 1hj8_A 101 QPVALPTSCAPAGTMCTVSGWGNT 124 (222)
T ss_dssp CCCBCCSSCCCTTCEEEEEESSCC
T ss_pred eccCCCCCCCCCCCEEEEEECCCC
Confidence 77778653 356789999998643
No 208
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.17 E-value=2.9e-06 Score=73.92 Aligned_cols=70 Identities=10% Similarity=0.124 Sum_probs=51.9
Q ss_pred CceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEc--CCCCCCccccCccchHHH
Q 036586 310 FPILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSY 385 (568)
Q Consensus 310 ~~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V--~~~~dl~~~~~~~~~l~~ 385 (568)
.+.+|+.+... .. ...+++|..|.++|||++ | |++||+|++|||++| .++.+ +..
T Consensus 35 ~~~lG~~l~~~-~~----------~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~----------~~~ 93 (114)
T 2gzv_A 35 QNLIGISIGGG-AQ----------YCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVE----------VAK 93 (114)
T ss_dssp TSCCSEEEEEC-CC------------CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHH
T ss_pred CCcEeEEEEeC-CC----------CCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHH
Confidence 45689888754 11 124799999999999999 9 999999999999999 55544 445
Q ss_pred HHhccCCCCEEEEEEEE
Q 036586 386 LVSQKYTGDSAVVKVLR 402 (568)
Q Consensus 386 ~l~~~~~g~~v~l~V~R 402 (568)
++.. .++.+.|+|.+
T Consensus 94 ~l~~--~~~~v~l~v~~ 108 (114)
T 2gzv_A 94 MIQE--VKGEVTIHYNK 108 (114)
T ss_dssp HHHH--CCSEEEEEEEC
T ss_pred HHHc--CCCeEEEEEEe
Confidence 5544 34568888764
No 209
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.16 E-value=1.8e-06 Score=75.70 Aligned_cols=60 Identities=25% Similarity=0.365 Sum_probs=47.7
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECC
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNS 404 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g 404 (568)
..|++|..|.++|||++ | |++||+|++|||+.+.+..... +..++.. .++.+.|+|.|..
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~--------~~~~l~~--~~~~v~L~v~R~~ 113 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSE--------AVALLKR--TSSSIVLKALEVK 113 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHH--------HHHHHHS--CCSEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECC
Confidence 46899999999999999 9 9999999999999999543211 3344443 4788999999843
No 210
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.16 E-value=3.9e-06 Score=69.58 Aligned_cols=60 Identities=17% Similarity=0.203 Sum_probs=50.0
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
.+++|..|.+++++...| ++.||+|++|||+++. +++++.++++... +.+.|++.|++..
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~g~~ 85 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQRDERA 85 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-TEEEEEEEC----
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CcEEEEEEeCCce
Confidence 358999999998877777 7899999999999999 9999999999865 4899999998864
No 211
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.16 E-value=1.1e-06 Score=76.67 Aligned_cols=61 Identities=16% Similarity=0.261 Sum_probs=48.4
Q ss_pred CCceEEEEecCCCcccCCCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESHVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.+++||+.||++||+|++|||++|.++.... +..++.. .++.+.|+|.|++.
T Consensus 45 ~~gv~V~~V~~~spA~~gL~~GD~I~~Vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 45 ETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHSF--------AVQQLRK--SGKIAAIVVKRPRK 105 (117)
T ss_dssp CCBCEEEEECTTSSHHHHBCTTCEEEEESSCBCBTCCHHH--------HHHHHHH--SCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCCcccccCCCCCEEEEECCEECCCcCHHH--------HHHHHhc--CCCeEEEEEEECCc
Confidence 4589999999999996599999999999999998865411 2233333 58899999999655
No 212
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.16 E-value=2.5e-06 Score=73.05 Aligned_cols=62 Identities=15% Similarity=-0.009 Sum_probs=50.5
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHcc-CCCeEEEEEEcCeEEE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESS-EDEFLKFDLEYQQIVV 539 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~-~~~~v~l~v~R~~~~~ 539 (568)
.|++|..+.+++++...|+++||+|++|||++|.+|.+|.++++.. +++.+.|++.|+|+.+
T Consensus 37 ~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~ 99 (105)
T 2i4s_A 37 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQH 99 (105)
T ss_dssp EEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETTEEE
T ss_pred EEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECCEEE
Confidence 3566666666655566677799999999999999999999999875 5679999999998643
No 213
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.16 E-value=8.8e-07 Score=76.56 Aligned_cols=62 Identities=15% Similarity=0.161 Sum_probs=49.8
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccC--CCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKY--TGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~--~g~~v~l~V~R~g~ 405 (568)
.+++|..|.+++||++ | |++||+|++|||+.+.++..- .+..+|.... .+..+.|+|.|+++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~--------~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFE--------EAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHH--------HHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHccccCCCceEEEEEEeCCC
Confidence 3799999999999999 9 999999999999999874320 0445665543 47889999999875
No 214
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.15 E-value=1.4e-06 Score=82.95 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=48.7
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++.. .+++.....|+.+.|+|.|+|+
T Consensus 110 ~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~-----------~~~~~~l~~~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTH-----------EEVINLIRTEKTVSIKVRHIGL 169 (192)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCH-----------HHHHHHHTSSSEEEEEEEECCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCH-----------HHHHHHHcCCCeEEEEEEECCc
Confidence 4899999999999999 999999999999999988432 2233333338999999999988
No 215
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.15 E-value=1.5e-06 Score=73.64 Aligned_cols=59 Identities=12% Similarity=0.175 Sum_probs=47.1
Q ss_pred CceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.+++|..|.++|||++ ||++||+|++|||++|.++ ... +..++.. .++.+.|+|.|+++
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~--------~~~~~~~--~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQE--------ALILIKG--SFRILKLIVRRRNS 95 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHH--------HHHHHHT--CCSSCEEEEEECCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHH--------HHHHHHh--CCCeEEEEEEeCCC
Confidence 4789999999999988 7999999999999999885 210 2233332 47889999999876
No 216
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=98.15 E-value=4.7e-05 Score=74.21 Aligned_cols=152 Identities=16% Similarity=0.159 Sum_probs=88.4
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEc------CCCcEEEEEEEEEeC------------------CCCeEEEEec
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKR------GSDTKYLATVLSIGT------------------ECDIALLTVK 205 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~------~dg~~~~a~vv~~d~------------------~~DlAlLkv~ 205 (568)
..++|.+|++.+|||+||++.+...+.+-.. ..+..+..+-+..|| ..|||||+++
T Consensus 24 ~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~ 103 (237)
T 2zch_P 24 AVCGGVLVHPQWVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRLS 103 (237)
T ss_dssp EEEEEEEEETTEEEECGGGCCSSCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTSSSCCTTCBCTTCCEEEEES
T ss_pred eEEEEEEecCCEEEEcHHhcCCCceEEEecccccCCCCCcEEEEEEEEecCCCcchhhhcccccccCCCCCcceEEEEeC
Confidence 5699999999999999999987554443221 123445555444554 5699999998
Q ss_pred cCc-cccCccceecCCC-cccCCeEEEEecCCCCC------C--ceEEEEEEeeeec------------------cc---
Q 036586 206 DDE-FWEGVSPVEFGDL-PALQDAVTVVGYPIGGD------T--ISVTSGVVSRMEI------------------LS--- 254 (568)
Q Consensus 206 ~~~-~~~~l~~~~l~~~-~~~g~~V~aiG~P~g~~------~--~svt~GiIs~~~~------------------~~--- 254 (568)
... +...+.|+.|... ...++.+++.|+..... . ..+..-+++.-.. ..
T Consensus 104 ~~~~~~~~v~pi~Lp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~ 183 (237)
T 2zch_P 104 EPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFMLCAGRWTGGKS 183 (237)
T ss_dssp SCCCCCSSCCCCCCCSSCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSBCCTTEEEEECTTCSCB
T ss_pred CCCccCCcEeeeECCCCCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccccCCCCceEEeecCCCCCCc
Confidence 653 2235677777653 35678999999854311 0 1122222321100 00
Q ss_pred --ccCCCceeecccceEEEEEeeeecCCC-CccccccccchhhhHhHHHhh
Q 036586 255 --YVHGSTELLGLQGKCVGIAFQSLKNDD-VENIGYVIPTPVIIHFIQDYE 302 (568)
Q Consensus 255 --~~~ggspL~n~~G~VVGI~~~~~~~~~-~~~~~~aIP~~~i~~~l~~l~ 302 (568)
..++||||+- +|.++||++.+...-+ ....+....+...++++++..
T Consensus 184 ~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 233 (237)
T 2zch_P 184 TCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTI 233 (237)
T ss_dssp CCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred ccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence 0136779996 5899999987541101 112233344455555555543
No 217
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.15 E-value=4e-07 Score=79.76 Aligned_cols=63 Identities=17% Similarity=0.206 Sum_probs=48.6
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
..|++|..|.+++||++ | |++||+|++|||++|.++.... +..++.. ..+..+.++|.|+++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~l~~-~~~~~~~l~v~R~~~~ 105 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHD--------ALAILRQ-AREPRQAVIVTRKLTP 105 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHH--------HHHHHHH-TTSSSEEEEEEECCCS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh-CCCCeEEEEEEcCCCc
Confidence 35899999999999999 9 9999999999999998643311 2334433 2456677889998875
No 218
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.14 E-value=1.8e-06 Score=77.93 Aligned_cols=63 Identities=10% Similarity=0.108 Sum_probs=54.6
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeEEE
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQIVV 539 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~~~ 539 (568)
..+++|..|.+++++...|++.||+|++|||++|. +++++.++|+..++..+.|++.|++...
T Consensus 63 ~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~ 127 (139)
T 2vz5_A 63 DKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQSLQK 127 (139)
T ss_dssp CCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEECC---
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEECCEEE
Confidence 46799999999988887778899999999999999 6999999999877789999999988644
No 219
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.14 E-value=1.8e-06 Score=74.22 Aligned_cols=60 Identities=12% Similarity=0.118 Sum_probs=46.8
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
..|++|..|.+++||++ | |++||+|++|||+.|.+..... +..++... .++.+.|+|.|.
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~~-~~~~v~l~v~R~ 104 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAE--------AVEILKAV-PPGLVHLGICSG 104 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHH--------HHHHHHHS-CSEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhC-CCCeEEEEEEcC
Confidence 46899999999999999 9 9999999999999998743200 33445443 456899999884
No 220
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.14 E-value=3.1e-06 Score=69.68 Aligned_cols=59 Identities=12% Similarity=0.135 Sum_probs=52.1
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||+++.++ .++.++++.. ++.+.|++.|++.
T Consensus 27 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGC-TGSLNMTLQRESD 87 (88)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEECCCC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeCCC
Confidence 358999999998887777889999999999999999 8999998876 7899999999874
No 221
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.13 E-value=3.3e-06 Score=71.04 Aligned_cols=60 Identities=17% Similarity=0.257 Sum_probs=52.1
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCeE
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
..+++|..|.+++++...+ ++.||+|++|||++|.++ .++..+++. .+..+.|++.|+++
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE-ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH-SCSEEEEEEEEC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEeCCC
Confidence 3579999999998887777 789999999999999997 889999988 67899999999874
No 222
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=98.13 E-value=0.00011 Score=71.52 Aligned_cols=150 Identities=13% Similarity=0.116 Sum_probs=86.4
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC------------------CCeEEEE
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE------------------CDIALLT 203 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~------------------~DlAlLk 203 (568)
..++|.+|++.+|||+||++. ..+.|.+-. ....+..+-+..||. .|||||+
T Consensus 22 ~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~ 99 (235)
T 1ton_A 22 YLCGGVLIDPSWVITAAHCYS--NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLH 99 (235)
T ss_dssp SEEEEEEEETTEEEECGGGCC--SCCEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC--------CCCCSTTCCEEEE
T ss_pred CeEEEEEecCCEEEEcHHhCC--CCcEEEeCcccccCCCCcceEEEEEEEEeCCCCcccccccccccccCCCcCCEEEEE
Confidence 569999999999999999996 344555421 123343433344443 4999999
Q ss_pred eccCc-cccCccceecCCCc-ccCCeEEEEecCCCCC------C--ceEEEEEEeeeecc--------------c-----
Q 036586 204 VKDDE-FWEGVSPVEFGDLP-ALQDAVTVVGYPIGGD------T--ISVTSGVVSRMEIL--------------S----- 254 (568)
Q Consensus 204 v~~~~-~~~~l~~~~l~~~~-~~g~~V~aiG~P~g~~------~--~svt~GiIs~~~~~--------------~----- 254 (568)
++... +...+.|+.|.... ..++.+.+.|+..... . ..+..-+++.-... .
T Consensus 100 L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~ 179 (235)
T 1ton_A 100 LSEPADITGGVKVIDLPTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEMEGG 179 (235)
T ss_dssp ESSCCCCCSSCCCCCCCCSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGSTTGGGGEEEEECTTCS
T ss_pred cCCccccCCcceeeeCCCCCCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcCcCCCCeEeeccCCCC
Confidence 98653 23356778876543 5679999999854311 1 11222333321100 0
Q ss_pred ----ccCCCceeecccceEEEEEeeeecCCCC-ccccccccchhhhHhHHHhh
Q 036586 255 ----YVHGSTELLGLQGKCVGIAFQSLKNDDV-ENIGYVIPTPVIIHFIQDYE 302 (568)
Q Consensus 255 ----~~~ggspL~n~~G~VVGI~~~~~~~~~~-~~~~~aIP~~~i~~~l~~l~ 302 (568)
..++||||+- +|.++||++.+...-+. ...+...-+...++++++..
T Consensus 180 ~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 231 (235)
T 1ton_A 180 KDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVM 231 (235)
T ss_dssp CBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 0136779997 68999999875211011 12233344455555555543
No 223
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.13 E-value=2e-06 Score=75.88 Aligned_cols=60 Identities=15% Similarity=0.187 Sum_probs=54.6
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCCHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.++++|.++|+..++..+.|++.|++.
T Consensus 48 ~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~g~ 108 (124)
T 1wh1_A 48 IGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKNFSLLIARPEL 108 (124)
T ss_dssp CCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTCSSCCSCCEEEEECSS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHhCCCCEEEEEEEECCE
Confidence 569999999998888778 889999999999999999999999998778899999999874
No 224
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.13 E-value=8.9e-07 Score=75.77 Aligned_cols=61 Identities=15% Similarity=0.289 Sum_probs=48.0
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .++.+.|+|.|++.
T Consensus 31 ~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~r~~~ 92 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEE--------VVEKVKK--SGSRVMFLLVDKET 92 (106)
T ss_dssp CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHH--------HHHHHHH--HCSEEEEEECCTTT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEcCch
Confidence 35899999999999999 99999999999999998654311 2233332 47889999998764
No 225
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.13 E-value=2.6e-06 Score=76.20 Aligned_cols=61 Identities=15% Similarity=0.252 Sum_probs=48.1
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
.|++|..|.++|||++ ||++||+|++|||+.|.++.... +..++.. .|+.+.|+|.|....
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~~~~~~ 126 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQ--------VVNMIRQ--GGNTLMVKVVMVTRH 126 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHH--------HHHHHHH--TTTEEEEEEECCCC-
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCEEEEEEEECCCC
Confidence 3899999999999999 99999999999999998754311 2334433 678999999886543
No 226
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.13 E-value=7.3e-06 Score=88.27 Aligned_cols=86 Identities=16% Similarity=0.079 Sum_probs=72.0
Q ss_pred eeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCC
Q 036586 433 IIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN 512 (568)
Q Consensus 433 ~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~ 512 (568)
.|+|+.+++++ +.+.+.++++ ....|++|..|.+++++...|++.||+|++|||++|.+
T Consensus 258 ~~lGv~~~~~~-~~~a~~~gl~--------------------~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~ 316 (451)
T 3pv2_A 258 GLMGIFVQHLT-PELAQAMGYP--------------------EDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQ 316 (451)
T ss_dssp CBCCEEEEECC-HHHHHHTTSC--------------------TTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS
T ss_pred ccccceEEecc-HHHHHhcCCC--------------------cCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCC
Confidence 48999999998 5566677742 11267999999999988888888999999999999999
Q ss_pred HHHHHHHHHcc-CCCeEEEEEEcCeEEE
Q 036586 513 LKSLADMVESS-EDEFLKFDLEYQQIVV 539 (568)
Q Consensus 513 l~~f~~~l~~~-~~~~v~l~v~R~~~~~ 539 (568)
|.+|..++... +++.+.|++.|+++..
T Consensus 317 ~~~l~~~l~~~~~g~~v~l~V~R~g~~~ 344 (451)
T 3pv2_A 317 ATQVKTTISLLRVGSTVKIIVERDNKPL 344 (451)
T ss_dssp HHHHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred HHHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 99999999974 5779999999988643
No 227
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.12 E-value=2.1e-06 Score=72.36 Aligned_cols=60 Identities=8% Similarity=0.031 Sum_probs=53.6
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|.+ ++++.++|+..++..+.+.+.|+++
T Consensus 33 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g~ 94 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETD 94 (98)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCch
Confidence 36899999999888777788999999999999999 9999999999877788899998764
No 228
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.12 E-value=1.5e-06 Score=82.86 Aligned_cols=61 Identities=26% Similarity=0.420 Sum_probs=52.2
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEVH 407 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~ 407 (568)
..|++|..|.++|||++ | |++||+|++|||++|. ++.+ +..++.. .++.+.|+|.|+++.+
T Consensus 134 ~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~~~~v~l~v~R~~~~~ 198 (200)
T 2qt5_A 134 SRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAE----------AMSILKQ--CGQEATLLIEYDVSVM 198 (200)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHHHHHT--TCSEEEEEEEEEEEC-
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCeEEEEEEECCccC
Confidence 35899999999999999 9 9999999999999999 6655 5566665 7899999999988754
No 229
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.12 E-value=6.1e-06 Score=70.03 Aligned_cols=59 Identities=7% Similarity=0.095 Sum_probs=51.1
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.+ ++++.++|+...+ .+.|++.|...
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~r~~~ 100 (103)
T 2fcf_A 39 RGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAGN-PVVFMVQSIIS 100 (103)
T ss_dssp --EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCCS-SEEEEEECCCC
T ss_pred CCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-cEEEEEEECCC
Confidence 579999999998887777 88999999999999998 9999999998854 89999998753
No 230
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.12 E-value=2.3e-06 Score=71.37 Aligned_cols=59 Identities=14% Similarity=0.248 Sum_probs=46.2
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..+++|..|.++|||++ | |++||+|++|||++|. ++.+ +..++.. .++.+.|+|.|...
T Consensus 27 ~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~~~~v~l~v~~~~~ 89 (93)
T 3o46_A 27 TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEE----------IIQILAQ--SQGAITFKIIPGSK 89 (93)
T ss_dssp TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHH----------HHHHHHH--CCEEEEEEEECC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHh--CCCeEEEEEEeCCC
Confidence 35899999999999999 9 9999999999999994 4444 4555544 34589999988654
No 231
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.11 E-value=3.9e-06 Score=70.40 Aligned_cols=60 Identities=12% Similarity=0.087 Sum_probs=54.0
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
..+++|..|.+++++...+ ++.||+|++|||+++.+ ++++.++|+. .++.+.|.+.|++.
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~~ 93 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEAALLIEYDVS 93 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 3579999999998888777 78999999999999999 9999999998 78899999999764
No 232
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=98.10 E-value=4.1e-05 Score=74.24 Aligned_cols=151 Identities=16% Similarity=0.167 Sum_probs=89.8
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcCC--------CcEEEEEEEEEeC-------CCCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGS--------DTKYLATVLSIGT-------ECDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~d--------g~~~~a~vv~~d~-------~~DlAlLkv~~~~-~~~~l 213 (568)
..++|.+|++.+|||+||++.+...+.|.+... ...+..+-+..|+ ..|||||+++... +...+
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~~v 103 (226)
T 1azz_A 24 YFCGGSLISPEWILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAI 103 (226)
T ss_dssp EEEEEEEEETTEEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTTBSCCEEEECSSCCCCCSSS
T ss_pred EEEEEEEecCCEEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCCCCceEEEEECCccccCCCc
Confidence 569999999999999999998877788877211 2234443334454 3699999998653 22356
Q ss_pred cceecCCCc-ccCCeEEEEecCCCCC------C--ceEEEEEEeeeec-----------------cc----ccCCCceee
Q 036586 214 SPVEFGDLP-ALQDAVTVVGYPIGGD------T--ISVTSGVVSRMEI-----------------LS----YVHGSTELL 263 (568)
Q Consensus 214 ~~~~l~~~~-~~g~~V~aiG~P~g~~------~--~svt~GiIs~~~~-----------------~~----~~~ggspL~ 263 (568)
.|+.|.... ..++.+.+.|+..... . ..+..-+++.-.. .. ..++||||+
T Consensus 104 ~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL~ 183 (226)
T 1azz_A 104 ATVGLPSTDVGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYGIVTDGNICIDSTGGKGTCNGDSGGPLN 183 (226)
T ss_dssp CCCBCCSSCCCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHSCCCTTEEEECCTTTCBCCTTCTTCEEE
T ss_pred ccccCCCCCCCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhCcCCCceEeecCCCCCccCCCCCCcceE
Confidence 777776533 5678999999754321 0 1122223321100 00 013677999
Q ss_pred cccceEEEEEeeeecCC-CCccccccccchhhhHhHHHh
Q 036586 264 GLQGKCVGIAFQSLKND-DVENIGYVIPTPVIIHFIQDY 301 (568)
Q Consensus 264 n~~G~VVGI~~~~~~~~-~~~~~~~aIP~~~i~~~l~~l 301 (568)
.+|.++||++.+.... .....+....+...++++++.
T Consensus 184 -~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~ 221 (226)
T 1azz_A 184 -YNGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQ 221 (226)
T ss_dssp -ETTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHH
T ss_pred -ECCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHH
Confidence 4789999998865211 111222334444555555544
No 233
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.10 E-value=1.1e-05 Score=70.07 Aligned_cols=61 Identities=18% Similarity=0.189 Sum_probs=48.6
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
.|.+|..|.+ ++.. ||++||+|++|||++|.+...-. +..+|.....|+.+.|+|.|+|..
T Consensus 34 ~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~e--------vv~~lk~~~~G~~v~L~V~R~g~~ 95 (113)
T 3soe_A 34 TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQ--------VVEVLKQFPVGADVPLLILRGGPP 95 (113)
T ss_dssp TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHH--------HHHHHHHSCTTCEEEEEEEESSCC
T ss_pred CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHcCCCCCEEEEEEEECCcc
Confidence 3677888877 5667 99999999999999999765211 556777666799999999999864
No 234
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=98.10 E-value=5.2e-05 Score=73.40 Aligned_cols=84 Identities=23% Similarity=0.379 Sum_probs=58.0
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC----------CCeEEEEeccCc-cc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE----------CDIALLTVKDDE-FW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~----------~DlAlLkv~~~~-~~ 210 (568)
..++|.+|++.+|||+||++.. .+.|.+.. .+..+..+-+..||. .|||||+++... +.
T Consensus 24 ~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~~~~~ 101 (225)
T 1npm_A 24 LICGGVLVGDRWVLTAAHCKKQ--KYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLG 101 (225)
T ss_dssp EEEEEEEEETTEEEECGGGCCS--SCEEEESCSBTTC--CCCEEECEEEEEECTTCCSSCTTCCTTCCEEEEESSCCCCS
T ss_pred eEEEEEEECCCEEEEhHHcCCC--CceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCccCccccEEEEeeCCcccCC
Confidence 5699999999999999999973 34555421 133444443444543 499999998653 22
Q ss_pred cCccceecCCC-cccCCeEEEEecCC
Q 036586 211 EGVSPVEFGDL-PALQDAVTVVGYPI 235 (568)
Q Consensus 211 ~~l~~~~l~~~-~~~g~~V~aiG~P~ 235 (568)
..+.|+.|... ...++.++++|+-.
T Consensus 102 ~~v~pi~L~~~~~~~~~~~~v~GwG~ 127 (225)
T 1npm_A 102 DKVKPVQLANLCPKVGQKCIISGWGT 127 (225)
T ss_dssp SSSCCCEECSSCCCTTCEEEEEESSC
T ss_pred CceeceECCCCCCCCCCEEEEEeCCc
Confidence 35778888754 35679999999854
No 235
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.10 E-value=1.1e-06 Score=75.02 Aligned_cols=72 Identities=17% Similarity=0.293 Sum_probs=51.2
Q ss_pred eeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhc
Q 036586 313 LGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQ 389 (568)
Q Consensus 313 lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~ 389 (568)
+|+.+... ....+.. .....|++|..|.+++||++ ||++||+|++|||++|. ++.+ +..++..
T Consensus 29 ~G~~l~~~-~~~~~~~---~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~----------~~~~l~~ 94 (104)
T 2z17_A 29 FGFEIQSY-RPQNQNA---CSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQ----------VVDLIRS 94 (104)
T ss_dssp CSEEEEEC-CCCCCSS---SCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHH----------HHHHHHH
T ss_pred ccEEEEee-ecccCCc---ccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHH----------HHHHHHh
Confidence 68888764 2211111 11245899999999999999 99999999999999998 4444 5566665
Q ss_pred cCCCCEEEEEE
Q 036586 390 KYTGDSAVVKV 400 (568)
Q Consensus 390 ~~~g~~v~l~V 400 (568)
. ++.+.|+|
T Consensus 95 ~--~~~v~l~v 103 (104)
T 2z17_A 95 S--GNLLTIET 103 (104)
T ss_dssp T--TTEEEEEC
T ss_pred C--CCcEEEEE
Confidence 4 34777765
No 236
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.09 E-value=1e-06 Score=76.43 Aligned_cols=56 Identities=23% Similarity=0.341 Sum_probs=46.3
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhccCCCCEEEEEEEE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLR 402 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R 402 (568)
.+++|..|.+++||++ ||++||+|++|||++|. ++.+ +..++... .++.+.|+|.|
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d----------~~~~i~~~-~~~~v~l~V~~ 94 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSE----------VMKLLKSF-GGEEVEMKVVS 94 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHH----------HHHHHHHT-TTSEECEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC-CCceEEEEEEe
Confidence 4788999999999999 99999999999999999 6555 45566543 45678888876
No 237
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.09 E-value=2.1e-06 Score=90.80 Aligned_cols=63 Identities=14% Similarity=0.235 Sum_probs=51.3
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ ||++||+|++|||++|.+...- .+..++.....|+.+.|+|.|+|+
T Consensus 30 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~--------e~~~~l~~~~~g~~v~l~v~r~~~ 93 (391)
T 3tsz_A 30 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIRE--------EAVLFLLDLPKGEEVTILAQKKKD 93 (391)
T ss_dssp TTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHH--------HHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhhcCCCeEEEEEeeCCc
Confidence 35999999999999999 9999999999999999874210 044555554689999999999863
No 238
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.09 E-value=2.3e-06 Score=71.09 Aligned_cols=59 Identities=12% Similarity=0.024 Sum_probs=50.1
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|. +++++.++|+.. ++.+.|++.|++.
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 87 (91)
T 2vsp_A 27 PGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSS-GKNVTLLVCGKKA 87 (91)
T ss_dssp SCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-CSEEEEEEEC---
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEeCCc
Confidence 3578999999988877778899999999999999 999999999988 8899999999865
No 239
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=98.08 E-value=7.4e-05 Score=72.32 Aligned_cols=84 Identities=20% Similarity=0.201 Sum_probs=59.2
Q ss_pred eEEEEEEeCCEEEEcccccCCCCeEEEEEcC------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCccce
Q 036586 151 SSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGVSPV 216 (568)
Q Consensus 151 ~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~ 216 (568)
.++|.+|++.+|||+||++. ..+.|.+.. ....+..+-+..||. .|||||+++... +...+.|+
T Consensus 25 ~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi 102 (224)
T 2qxi_A 25 HCGGVLVNERWVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKV 102 (224)
T ss_dssp EEEEEEEETTEEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTCCEEEECSSCCCCBTTBCCC
T ss_pred EEEEEEecCCEEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCcEEEEEeCCCCcCCCceeeE
Confidence 68999999999999999995 566776621 123445444455554 599999998653 22356777
Q ss_pred ecCCC-cccCCeEEEEecCCC
Q 036586 217 EFGDL-PALQDAVTVVGYPIG 236 (568)
Q Consensus 217 ~l~~~-~~~g~~V~aiG~P~g 236 (568)
.|... ...++.++++|+...
T Consensus 103 cL~~~~~~~~~~~~v~GwG~~ 123 (224)
T 2qxi_A 103 RLPSRCEPPGTTCTVSGWGTT 123 (224)
T ss_dssp CCCSSCCCTTCEEEEEESSCS
T ss_pred ECCCCCCCCCCEEEEEeCCcc
Confidence 77653 356789999998643
No 240
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.08 E-value=8.1e-06 Score=69.03 Aligned_cols=58 Identities=16% Similarity=0.113 Sum_probs=50.1
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|.+ +.++.+.++. +..+.|++.|+++
T Consensus 36 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~--~~~v~l~v~R~g~ 95 (100)
T 2eeh_A 36 LGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS--SSRLHMMVRRMGS 95 (100)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS--CSSEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC--CCEEEEEEEECCc
Confidence 35899999999888777788999999999999998 5778777776 6789999999875
No 241
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=98.07 E-value=0.00011 Score=71.20 Aligned_cols=153 Identities=14% Similarity=0.102 Sum_probs=88.6
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC-------CCcEE--EEEEEEEeCC-------CCeEEEEeccCc-cccC
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG-------SDTKY--LATVLSIGTE-------CDIALLTVKDDE-FWEG 212 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~-------dg~~~--~a~vv~~d~~-------~DlAlLkv~~~~-~~~~ 212 (568)
...+|.+|++.+|||+||++... +.|.+.. +.... ....+..++. .|||||+++... +...
T Consensus 26 ~~CgGtLI~~~~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~ 103 (234)
T 3s9c_A 26 IHCAGALINREWVLTAAHCDRRN--IRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTH 103 (234)
T ss_dssp EEEEEEEEETTEEEECGGGCCTT--EEEEESCSSSSSCCTTCEEECEEEEECCSSCSSTTCGGGCCEEEEESSCCCCBTT
T ss_pred EEEeeEEeeCCEEEEchhhcCCC--ceEEEeecccccccCCcceEEeeeEEEeCCCCCCCCCcCceEEEEECCccccCCc
Confidence 45899999999999999999754 4444411 11111 2222322433 499999998653 2345
Q ss_pred ccceecCCCc-ccCCeEEEEecCCCCC------CceEEEEEEeeeecc---------------c---------ccCCCce
Q 036586 213 VSPVEFGDLP-ALQDAVTVVGYPIGGD------TISVTSGVVSRMEIL---------------S---------YVHGSTE 261 (568)
Q Consensus 213 l~~~~l~~~~-~~g~~V~aiG~P~g~~------~~svt~GiIs~~~~~---------------~---------~~~ggsp 261 (568)
+.|+.|.... ..++.+.+.|+..... ...+..-+++.-... . ..++|||
T Consensus 104 v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 183 (234)
T 3s9c_A 104 IAPVSLPSRSRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSGGP 183 (234)
T ss_dssp BCCCBCCSSCCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSSEEEEECTTSSCBCCTTCTTCE
T ss_pred ccccccCCCCCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcceEEeecCCCCCccCCCCCCCe
Confidence 6778886543 5689999999853211 112233333321100 0 0136779
Q ss_pred eecccceEEEEEeeeecCCCC-ccccccccchhhhHhHHHhhhcC
Q 036586 262 LLGLQGKCVGIAFQSLKNDDV-ENIGYVIPTPVIIHFIQDYEKNG 305 (568)
Q Consensus 262 L~n~~G~VVGI~~~~~~~~~~-~~~~~aIP~~~i~~~l~~l~~~g 305 (568)
|+- +++++||++.+...-+. ...+....+...++++++..+..
T Consensus 184 l~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~ 227 (234)
T 3s9c_A 184 LIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGN 227 (234)
T ss_dssp EEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred EEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCC
Confidence 996 67899999885421111 12334455566667776665443
No 242
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=98.06 E-value=0.00016 Score=69.81 Aligned_cols=150 Identities=19% Similarity=0.119 Sum_probs=86.3
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
..++|.+|++.+|||+||++... +.|.+.. .+..+...=+..||. .|||||+++... +...+
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIAll~L~~~~~~~~~v 101 (223)
T 1lo6_A 24 LLCGGVLIHPLWVLTAAHCKKPN--LQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELI 101 (223)
T ss_dssp EEEEEEEEETTEEEECGGGCCTT--CEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTB
T ss_pred EEEEeEEecCCEEEECccCCCCC--eEEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCCcCeEEEEEECCcccCCCce
Confidence 56999999999999999999743 4444411 133444443445553 599999998653 22356
Q ss_pred cceecCCCc-ccCCeEEEEecCCCCC----C--ceEEEEEEeeeec------------------c-c----ccCCCceee
Q 036586 214 SPVEFGDLP-ALQDAVTVVGYPIGGD----T--ISVTSGVVSRMEI------------------L-S----YVHGSTELL 263 (568)
Q Consensus 214 ~~~~l~~~~-~~g~~V~aiG~P~g~~----~--~svt~GiIs~~~~------------------~-~----~~~ggspL~ 263 (568)
.|+.|.... ..++.+.++|+-.... . ..+..-+++.-.. . . ..++||||+
T Consensus 102 ~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~ 181 (223)
T 1lo6_A 102 QPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLV 181 (223)
T ss_dssp CCCCBCCCTTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTCEEE
T ss_pred eecccCCCCCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeEEeecCCCCCeeccccCCCcEE
Confidence 778886533 5678999999854321 1 1122223322100 0 0 013677999
Q ss_pred cccceEEEEEeeeecCCC-CccccccccchhhhHhHHHhh
Q 036586 264 GLQGKCVGIAFQSLKNDD-VENIGYVIPTPVIIHFIQDYE 302 (568)
Q Consensus 264 n~~G~VVGI~~~~~~~~~-~~~~~~aIP~~~i~~~l~~l~ 302 (568)
- +|.++||++.+...-+ ....+...-+...++++++..
T Consensus 182 ~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 220 (223)
T 1lo6_A 182 C-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTI 220 (223)
T ss_dssp E-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHH
T ss_pred e-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 7 6899999987521101 112233344444555555443
No 243
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.05 E-value=2.7e-06 Score=71.11 Aligned_cols=59 Identities=15% Similarity=0.217 Sum_probs=52.9
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|.++ +++.++++..+ ..+.|++.|+++
T Consensus 30 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~g~ 90 (94)
T 1vb7_A 30 TPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSA-SPLRLQLDRSSG 90 (94)
T ss_dssp EEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SSEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEECCc
Confidence 468999999988877777889999999999999997 99999999886 889999999875
No 244
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=98.05 E-value=0.00011 Score=71.30 Aligned_cols=84 Identities=15% Similarity=0.201 Sum_probs=57.2
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEc---------CCCcEEEEEEEEEeC-------CCCeEEEEeccCc-cccC
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKR---------GSDTKYLATVLSIGT-------ECDIALLTVKDDE-FWEG 212 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~---------~dg~~~~a~vv~~d~-------~~DlAlLkv~~~~-~~~~ 212 (568)
...+|.+|++.+|||+||++... +.|.+. .....+...-+..|| ..|||||+++... +...
T Consensus 25 ~~CgGtLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 102 (227)
T 2psx_A 25 LYCGAVLVHPQWLLTAAHCRKKV--FRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKD 102 (227)
T ss_dssp EEEEEEEEETTEEEECGGGCCSS--CEEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSSSCTTCCEEEEESSCCCCCSS
T ss_pred ceEEEEEEcCCEEEEhHHcCCCC--cEEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEeCCCCCCCCc
Confidence 56999999999999999999854 344441 112344444344454 3599999998653 2235
Q ss_pred ccceecCCC-cccCCeEEEEecCC
Q 036586 213 VSPVEFGDL-PALQDAVTVVGYPI 235 (568)
Q Consensus 213 l~~~~l~~~-~~~g~~V~aiG~P~ 235 (568)
+.|+.|... ...++.++++|+..
T Consensus 103 v~pi~l~~~~~~~~~~~~v~GwG~ 126 (227)
T 2psx_A 103 VRPINVSSHCPSAGTKCLVSGWGT 126 (227)
T ss_dssp SCCCCBCSSCCCTTCEEEEEESSC
T ss_pred eeeeECCCCCCCCCCEEEEEeCcc
Confidence 677878653 35678999999854
No 245
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=98.04 E-value=0.00029 Score=67.92 Aligned_cols=151 Identities=16% Similarity=0.125 Sum_probs=87.9
Q ss_pred ceEEEEEEeCCEEEEcccccCCC--CeEEEEEcCCC----------cEEEEEEEEEe------CCCCeEEEEeccCc-cc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH--TQVKVKKRGSD----------TKYLATVLSIG------TECDIALLTVKDDE-FW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~--~~i~V~~~~dg----------~~~~a~vv~~d------~~~DlAlLkv~~~~-~~ 210 (568)
..++|.+|++.+|||+||++.+. ..+.|.+- .. ..+..+-+..+ ...|||||+++... +.
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~V~~G-~~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~ 102 (225)
T 1a7s_A 24 HFCGGALIHARFVMTAASCFQSQNPGVSTVVLG-AYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLT 102 (225)
T ss_dssp EEEEEEEEETTEEEECGGGC----CCSEEEEES-CSSTTSCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESSCCCCB
T ss_pred cEEEEEEeeCCEEEEchhccCCCCCCceEEEEe-eeECCCCCCcceeEEeEEEEecccccCCCCcCCEEEEEcCCcccCC
Confidence 56999999999999999999753 45777762 21 34444333333 34699999998653 22
Q ss_pred cCccceecCCCc---ccCCeEEEEecCCCCC-----C--ceEEEEEEeeeec----------c----c-ccCCCceeecc
Q 036586 211 EGVSPVEFGDLP---ALQDAVTVVGYPIGGD-----T--ISVTSGVVSRMEI----------L----S-YVHGSTELLGL 265 (568)
Q Consensus 211 ~~l~~~~l~~~~---~~g~~V~aiG~P~g~~-----~--~svt~GiIs~~~~----------~----~-~~~ggspL~n~ 265 (568)
..+.|+.|.... ..++.+.+.|+..... . ..+..-+++.-.. . . ..++||||+-.
T Consensus 103 ~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~Ca~~~~~~~~~C~GDSGgPl~~~ 182 (225)
T 1a7s_A 103 SSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRPNNVCTGVLTRRGGICNGDGGTPLVCE 182 (225)
T ss_dssp TTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSCTTEEEEECSSSSCBCCTTCTTCEEEET
T ss_pred CceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhccCceEEeccCCCCCcccCCCcchheeC
Confidence 346677776433 4578999999864321 1 1122222221110 0 0 11467799975
Q ss_pred cceEEEEEeeeecCCCCccccccccchhhhHhHHHhhh
Q 036586 266 QGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYEK 303 (568)
Q Consensus 266 ~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 303 (568)
|.++||.+.+...-+.. .+....+...++++++..+
T Consensus 183 -g~l~Gi~S~g~~~C~~~-p~vyt~V~~~~~WI~~~~~ 218 (225)
T 1a7s_A 183 -GLAHGVASFSLGPCGRG-PDFFTRVALFRDWIDGVLN 218 (225)
T ss_dssp -TEEEEEEEEECSSTTSS-CEEEEEGGGGHHHHHHHHH
T ss_pred -CEEEEEEEEccCCcCCC-CcEEEEhHHhHHHHHHHhc
Confidence 89999998753111111 3444555566666666554
No 246
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=98.04 E-value=0.00016 Score=71.18 Aligned_cols=85 Identities=18% Similarity=0.250 Sum_probs=60.9
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcCC---------CcEEEEEEEEEeCC-------CCeEEEEeccCc-cccC
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGS---------DTKYLATVLSIGTE-------CDIALLTVKDDE-FWEG 212 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~ 212 (568)
..++|.+|++.+|||+||++.+...+.|.+- . ...+..+=+..||. .|||||+++... +...
T Consensus 25 ~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G-~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (250)
T 1aut_C 25 LACGAVLIHPSWVLTAAHCMDESKKLLVRLG-EYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQT 103 (250)
T ss_dssp EEEEEEEEETTEEEECGGGSSSCSCCEEEES-CCBTTCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred eEEEEEEeeCCEEEEChHHcCCCCceEEEEc-ccccCCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCCc
Confidence 5699999999999999999988777777762 2 23344444445554 599999998653 2234
Q ss_pred ccceecCCCc-------ccCCeEEEEecCC
Q 036586 213 VSPVEFGDLP-------ALQDAVTVVGYPI 235 (568)
Q Consensus 213 l~~~~l~~~~-------~~g~~V~aiG~P~ 235 (568)
+.|+.|.... ..++.+++.|+..
T Consensus 104 v~picLp~~~~~~~~~~~~g~~~~v~GwG~ 133 (250)
T 1aut_C 104 IVPICLPDSGLAERELNQAGQETLVTGWGY 133 (250)
T ss_dssp BCCCBCCCHHHHHHTTTSTTCEEEEEECCC
T ss_pred eeeeEcCCCccccccccCCCCEEEEEEeCC
Confidence 6677776532 3578899999864
No 247
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=98.04 E-value=0.00014 Score=70.04 Aligned_cols=125 Identities=17% Similarity=0.180 Sum_probs=77.3
Q ss_pred ceEEEEEEeCCEEEEcccccCCCC--eEEEEEcC--------CCcEEEEEEEEEe------CCCCeEEEEeccCc-cccC
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHT--QVKVKKRG--------SDTKYLATVLSIG------TECDIALLTVKDDE-FWEG 212 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~--~i~V~~~~--------dg~~~~a~vv~~d------~~~DlAlLkv~~~~-~~~~ 212 (568)
..++|.+|++.+|||+||++.+.. .+.|.+.. ....+...-+..+ ...|||||+++... +...
T Consensus 27 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~~~~~~~~ 106 (221)
T 1fuj_A 27 HFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPANLSAS 106 (221)
T ss_dssp CCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESSCCCCCSS
T ss_pred EEEEEEEecCCEEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCCccccCCc
Confidence 569999999999999999998643 57777621 1233444333332 34699999998653 2235
Q ss_pred ccceecCCCc---ccCCeEEEEecCCCCC-------CceEEEEEEeee---------ecc-c----ccCCCceeecccce
Q 036586 213 VSPVEFGDLP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRM---------EIL-S----YVHGSTELLGLQGK 268 (568)
Q Consensus 213 l~~~~l~~~~---~~g~~V~aiG~P~g~~-------~~svt~GiIs~~---------~~~-~----~~~ggspL~n~~G~ 268 (568)
+.|+.|.... ..++.+++.|+..... ...+..-++... ... . ..++||||+. +|.
T Consensus 107 v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~~~~C~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~ 185 (221)
T 1fuj_A 107 VATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVVTFFCRPHNICTFVPRRKAGICFGDSGGPLIC-DGI 185 (221)
T ss_dssp CCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEECTTCCTTEEEEECSSSSCBCCTTCTTCEEEE-TTE
T ss_pred ceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEEeeecCCceeeeccCCCCCCCCCCCCCCeeEE-CCE
Confidence 6777776533 3578999999854321 011222222100 000 0 0146779997 789
Q ss_pred EEEEEee
Q 036586 269 CVGIAFQ 275 (568)
Q Consensus 269 VVGI~~~ 275 (568)
++||.+.
T Consensus 186 l~Gi~s~ 192 (221)
T 1fuj_A 186 IQGIDSF 192 (221)
T ss_dssp EEEEEEE
T ss_pred EeEEEEE
Confidence 9999887
No 248
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=98.04 E-value=0.00017 Score=69.94 Aligned_cols=153 Identities=14% Similarity=0.125 Sum_probs=88.6
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC-----CCc--EEEEEEEEEeC-------CCCeEEEEeccCc-cccCcc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG-----SDT--KYLATVLSIGT-------ECDIALLTVKDDE-FWEGVS 214 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~-----dg~--~~~a~vv~~d~-------~~DlAlLkv~~~~-~~~~l~ 214 (568)
..++|.+|++.+|||+||++.....+.+-... ... .+..+.+..++ ..|||||+++... +...+.
T Consensus 26 ~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~ 105 (238)
T 4e7n_A 26 LFCGGTLINQEWVLTAAHCDRKNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHIA 105 (238)
T ss_dssp EEEEEEECSSSEEEECGGGCCSSCEEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSSSCCCEEEEESSCCCCBTTBC
T ss_pred EEEEEEEecCCEEEEhHHcCCCCCeEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCCCCcEEEEEeCCCccCCCcee
Confidence 56999999999999999999865444443211 011 12233333233 3599999998653 234567
Q ss_pred ceecCCC-cccCCeEEEEecCCCCC--------CceEEEEEEeeeecc----------------------c----ccCCC
Q 036586 215 PVEFGDL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRMEIL----------------------S----YVHGS 259 (568)
Q Consensus 215 ~~~l~~~-~~~g~~V~aiG~P~g~~--------~~svt~GiIs~~~~~----------------------~----~~~gg 259 (568)
|+.|... ...++.+.+.|+..... ...+..-+++.-... . ..++|
T Consensus 106 pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 185 (238)
T 4e7n_A 106 PFSLPSSPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDSG 185 (238)
T ss_dssp CCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTTCTT
T ss_pred eeeCCCCCCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCCCCC
Confidence 7777654 35689999999864211 111223333321100 0 01367
Q ss_pred ceeecccceEEEEEeeeecCCCC-ccccccccchhhhHhHHHhhh
Q 036586 260 TELLGLQGKCVGIAFQSLKNDDV-ENIGYVIPTPVIIHFIQDYEK 303 (568)
Q Consensus 260 spL~n~~G~VVGI~~~~~~~~~~-~~~~~aIP~~~i~~~l~~l~~ 303 (568)
|||+- +++++||.+.+...-+. ...+....+...++++++..+
T Consensus 186 gPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 229 (238)
T 4e7n_A 186 GPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIA 229 (238)
T ss_dssp CEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHT
T ss_pred cceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHh
Confidence 79996 68899999885421111 223344555566666666554
No 249
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.04 E-value=1.2e-05 Score=71.23 Aligned_cols=60 Identities=17% Similarity=0.186 Sum_probs=53.1
Q ss_pred CcceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHc-cCCCeEEEEEEcCeE
Q 036586 476 DEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVES-SEDEFLKFDLEYQQI 537 (568)
Q Consensus 476 ~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~-~~~~~v~l~v~R~~~ 537 (568)
...+++|..|.+++++... ++.||+|++|||++|.+|.+|.++|.. .+++.+.|++ |+++
T Consensus 23 ~~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~ 83 (125)
T 2hga_A 23 QPDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGT 83 (125)
T ss_dssp CCCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEE
T ss_pred CCCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCE
Confidence 3467999999998887777 889999999999999999999999996 4577999999 9998
No 250
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=98.04 E-value=0.00022 Score=68.83 Aligned_cols=84 Identities=25% Similarity=0.249 Sum_probs=58.9
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
..++|.+|++.+|||+||++.+ .+.|.+.. ....+..+-+..||. .|||||+++... +...+
T Consensus 27 ~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v 104 (224)
T 1cgh_A 27 SRCGGFLVREDFVLTAAHCWGS--NINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNV 104 (224)
T ss_dssp CEEEEEEEETTEEEECGGGCCS--SEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEeeCCEEEEhHHhCCC--CCEEEEeecccCCCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEECCCCcCCCce
Confidence 5799999999999999999986 45565521 123455554555654 499999998653 22356
Q ss_pred cceecCCCc---ccCCeEEEEecCC
Q 036586 214 SPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 214 ~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.|+.|.... ..++.+.+.|+..
T Consensus 105 ~picLp~~~~~~~~~~~~~v~GwG~ 129 (224)
T 1cgh_A 105 NPVALPRAQEGLRPGTLCTVAGWGR 129 (224)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred EeeECCCCCCCCCCCCEEEEEECCc
Confidence 778776533 3568899999754
No 251
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.04 E-value=1.8e-06 Score=74.53 Aligned_cols=60 Identities=22% Similarity=0.305 Sum_probs=48.2
Q ss_pred CceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.+++||++ | |++||+|++|||++|.++.... +..++. ..++.+.|+|.|+++
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQ--------AAAALK--RAGQSVTIVAQYRPE 100 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHH--------HHHHHH--SCCSEEEEEEECCHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCcEEEEEEECcc
Confidence 5899999999999999 9 9999999999999999875311 223333 368899999998764
No 252
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.04 E-value=1.3e-05 Score=82.51 Aligned_cols=89 Identities=13% Similarity=0.145 Sum_probs=70.8
Q ss_pred eeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCC
Q 036586 433 IIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN 512 (568)
Q Consensus 433 ~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~ 512 (568)
.|+|+.+++++ +.+.+++++... . ..+...|++|..|.+++++...|++.||+|++|||++|.+
T Consensus 227 ~~lGv~~~~l~-~~~~~~~~l~~~-------------~--~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~ 290 (325)
T 1lcy_A 227 RYIGVMMLTLS-PSILAELQLREP-------------S--FPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQN 290 (325)
T ss_dssp EECCEEEEECC-HHHHHHHTTSCT-------------T--SCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCS
T ss_pred cccceEeecCC-HHHHHhhCcccc-------------c--cccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCC
Confidence 37899999998 556657764210 0 0022468999999999988888888999999999999999
Q ss_pred HHHHHHHHHccCCCeEEEEEEcCeEEE
Q 036586 513 LKSLADMVESSEDEFLKFDLEYQQIVV 539 (568)
Q Consensus 513 l~~f~~~l~~~~~~~v~l~v~R~~~~~ 539 (568)
+++|.++|+. ++.+.|++.|+++.+
T Consensus 291 ~~~l~~~l~~--~~~v~l~v~R~g~~~ 315 (325)
T 1lcy_A 291 AEDVYEAVRT--QSQLAVQIRRGRETL 315 (325)
T ss_dssp HHHHHHHHTT--CSSEEEEEEETTEEE
T ss_pred HHHHHHHHhC--CCeEEEEEEECCEEE
Confidence 9999999986 478999999998754
No 253
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.03 E-value=4.3e-06 Score=73.33 Aligned_cols=60 Identities=22% Similarity=0.323 Sum_probs=53.7
Q ss_pred cceEEEEEEec--cccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCeE
Q 036586 477 EQIVVVSQVLV--ADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 477 ~~gvvvs~V~~--~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
..+++|..|.+ ++++...+++.||+|++|||++|.+| ++|.++|+.. ++.+.|++.|++.
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~-g~~v~l~v~R~g~ 106 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT-SQTLQLLIEHDPV 106 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC-SSCEEEEEEECSS
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC-CCEEEEEEEECCE
Confidence 35799999998 87777777789999999999999999 9999999988 7899999999875
No 254
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.03 E-value=6.3e-06 Score=68.19 Aligned_cols=58 Identities=9% Similarity=0.078 Sum_probs=52.0
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+++.||+|++|||++|.++ +++.++|+.. +..+.|.+.|.+
T Consensus 28 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~~ 87 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR-EDEARLLVVGPS 87 (90)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-SSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEccC
Confidence 468999999998887777889999999999999999 9999999987 789999999875
No 255
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.03 E-value=6.2e-06 Score=68.22 Aligned_cols=58 Identities=14% Similarity=0.204 Sum_probs=51.7
Q ss_pred eEEEEEEeccccccc-cccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 479 IVVVSQVLVADINIG-YEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 479 gvvvs~V~~~~~~~g-~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
+++|+.|.+++++.. .+++.||.|++|||+++. +++++.++|+..++ .+.|++.|.+.
T Consensus 26 ~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 26 HCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRG-SITFKIVPSYR 86 (88)
T ss_dssp GEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE-EEEEEEECCCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC-cEEEEEECCcC
Confidence 388999999888776 667799999999999999 99999999999887 89999998764
No 256
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=98.03 E-value=0.00011 Score=70.78 Aligned_cols=83 Identities=22% Similarity=0.195 Sum_probs=57.9
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcC------CCcEEEEEEEEEeCC-------CCeEEEEeccCccccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRG------SDTKYLATVLSIGTE-------CDIALLTVKDDEFWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~~~~~l 213 (568)
...+|.+|++.+|||+||++.+. ..+.|.+.. +...+...-+..+|. .|||||+++... .+
T Consensus 20 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v---~~ 96 (224)
T 3beu_A 20 MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPI---NQ 96 (224)
T ss_dssp TTEEEEEEETTEEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEEESSCC---CS
T ss_pred CceeEEEeeCCEEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEEeCCCC---CC
Confidence 35999999999999999999864 456666621 123455444455654 499999998764 56
Q ss_pred cceecCCCc-ccCCeEEEEecCC
Q 036586 214 SPVEFGDLP-ALQDAVTVVGYPI 235 (568)
Q Consensus 214 ~~~~l~~~~-~~g~~V~aiG~P~ 235 (568)
+++.+.... ..+..+.+.|+-.
T Consensus 97 ~~i~l~~~~~~~~~~~~v~GwG~ 119 (224)
T 3beu_A 97 PTLKIATTTAYNQGTFTVAGWGA 119 (224)
T ss_dssp CCCEECCSSTTSSSEEEEEESSC
T ss_pred CccccccccccCCCEEEEEecCc
Confidence 777776543 2356889999754
No 257
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.03 E-value=8.5e-06 Score=77.85 Aligned_cols=59 Identities=19% Similarity=0.164 Sum_probs=47.4
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .++.+.|+|.|.
T Consensus 135 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~--------~~~~l~~--~~~~v~L~V~R~ 195 (206)
T 3r0h_A 135 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV--------CYALFKG--ANGKVSMEVTRP 195 (206)
T ss_dssp SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHH--------HHHHHHT--CCSEEEEEEEEE
T ss_pred CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeC
Confidence 35899999999999999 8 9999999999999999874311 3344433 567899999984
No 258
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=98.03 E-value=0.00047 Score=66.35 Aligned_cols=147 Identities=18% Similarity=0.149 Sum_probs=86.0
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
...+|.+|++.+|||+||++.. .+.|.+.. ....+...-+..+|. .|||||+++... +...+
T Consensus 28 ~~CgGtLI~~~~VLTAAhC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v 105 (226)
T 4ag1_A 28 KFCGGFLIRRNFVLTAAHCAGR--SITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLAV 105 (226)
T ss_dssp EEEEEEEEETTEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSSS
T ss_pred cEEEEEEEeCCEEEECcccCCC--CeEEEeCCcccCCCCCcceEEEEEEEEeCCCCCCCCCcCcEEEEEECCCCccCCce
Confidence 5699999999999999999953 56666621 113345554556665 599999998653 22345
Q ss_pred cceecCCCc---ccCCeEEEEecCCCCC-----C--ceEEEEEEeeeecc---c-------------------ccCCCce
Q 036586 214 SPVEFGDLP---ALQDAVTVVGYPIGGD-----T--ISVTSGVVSRMEIL---S-------------------YVHGSTE 261 (568)
Q Consensus 214 ~~~~l~~~~---~~g~~V~aiG~P~g~~-----~--~svt~GiIs~~~~~---~-------------------~~~ggsp 261 (568)
.++.|.... ..++.+.+.|+..... . ..+..-+++.-... . ..++|||
T Consensus 106 ~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgP 185 (226)
T 4ag1_A 106 GTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSGGP 185 (226)
T ss_dssp CCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTTCCTTTEEEESCTTSCCBCCTTCTTCE
T ss_pred eccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccCcCccceEeeccCCCCCcCccCCCCCc
Confidence 666665432 4578899999854211 1 12223333321111 0 0136779
Q ss_pred eecccceEEEEEeeeecCCCCccccccccchhhhHhHHHh
Q 036586 262 LLGLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDY 301 (568)
Q Consensus 262 L~n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l 301 (568)
|+- ++.++||.+.+.. .....+....+...++++++.
T Consensus 186 l~~-~~~l~Gi~S~g~~--c~~~p~vyt~v~~~~~WI~~~ 222 (226)
T 4ag1_A 186 LLC-AGVAQGIVSYGRS--DAKPPAVFTRISHYRPWINQI 222 (226)
T ss_dssp EEE-TTEEEEEEEECBT--TCCSCEEEEEHHHHHHHHHHH
T ss_pred eEE-cCEEEEEEEECCC--CCCCCCEEEEhHHHHHHHHHH
Confidence 996 6899999987543 111233334444455555544
No 259
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=98.03 E-value=0.00027 Score=67.96 Aligned_cols=146 Identities=18% Similarity=0.181 Sum_probs=86.1
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
...+|.+|++.+|||+||++.. .+.|.+.. ....+..+-+..++. .|||||+++... +...+
T Consensus 28 ~~CgGtLI~~~~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v 105 (224)
T 3rp2_A 28 VICGGFLISRQFVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPAV 105 (224)
T ss_dssp EEEEEEESSSSEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCSSSCCSCCEEEEESSCCCCBTTB
T ss_pred EEEEeEEeeCCEEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEECCCccCCCCCccEEEEEcCCCcccCCcc
Confidence 5699999999999999999854 56666521 123455555556665 599999998653 22346
Q ss_pred cceecCCCc---ccCCeEEEEecCCCCC-------CceEEEEEEeeeeccc----------------------ccCCCce
Q 036586 214 SPVEFGDLP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRMEILS----------------------YVHGSTE 261 (568)
Q Consensus 214 ~~~~l~~~~---~~g~~V~aiG~P~g~~-------~~svt~GiIs~~~~~~----------------------~~~ggsp 261 (568)
.|+.|.... ..++.+.+.|+-.... ...+..-+++.-.... ..++|||
T Consensus 106 ~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgP 185 (224)
T 3rp2_A 106 NVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRYYEYKFQVCVGSPTTLRAAFMGDSGGP 185 (224)
T ss_dssp CCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTTCCCTTTEEEECCTTSCCBCCTTTTTCE
T ss_pred cceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhccccccCcCCEEEecCCCCCCeeccCCCCCe
Confidence 677776433 4568899999743210 1122233333211110 0136779
Q ss_pred eecccceEEEEEeeeecCCCCccccccccchhhhHhHHH
Q 036586 262 LLGLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQD 300 (568)
Q Consensus 262 L~n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~ 300 (568)
|+- ++.++||.+.+.. .....+....+...++++++
T Consensus 186 l~~-~~~l~Gi~S~g~~--c~~~p~vyt~v~~y~~WI~~ 221 (224)
T 3rp2_A 186 LLC-AGVAHGIVSYGHP--DAKPPAIFTRVSTYVPWINA 221 (224)
T ss_dssp EEE-TTEEEEEEEECCT--TCCSCEEEEEHHHHHHHHHH
T ss_pred EEE-cceeeEEEEECCC--CCCCCcEEEEHHHhHHHHHH
Confidence 997 6799999987542 11113333444444444444
No 260
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.03 E-value=2.9e-06 Score=73.97 Aligned_cols=68 Identities=19% Similarity=0.204 Sum_probs=51.7
Q ss_pred eeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCC--CCccccCccchHHHHHhc
Q 036586 313 LGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQ 389 (568)
Q Consensus 313 lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~--dl~~~~~~~~~l~~~l~~ 389 (568)
+|+.+..+ +.. + ..|++|..|.++|||++ ||++||+|++|||++|.++. + +..++.
T Consensus 31 ~G~~v~~~-~~~-----~----~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~----------~~~~l~- 89 (114)
T 2d8i_A 31 YGFSLSSV-EED-----G----IRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSM----------LKDFLS- 89 (114)
T ss_dssp CCCEEEEE-EET-----T----EEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHH----------HHHHHT-
T ss_pred cCEEEEec-CcC-----C----cCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHH----------HHHHHh-
Confidence 58887665 221 1 24899999999999999 99999999999999999863 2 333443
Q ss_pred cCCCCEEEEEEEECC
Q 036586 390 KYTGDSAVVKVLRNS 404 (568)
Q Consensus 390 ~~~g~~v~l~V~R~g 404 (568)
+..+.|+|.|..
T Consensus 90 ---~~~v~l~v~R~p 101 (114)
T 2d8i_A 90 ---QPSLGLLVRTYP 101 (114)
T ss_dssp ---SSEEEEEEEECC
T ss_pred ---CCcEEEEEEECC
Confidence 358888888854
No 261
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=98.03 E-value=0.00018 Score=69.51 Aligned_cols=84 Identities=19% Similarity=0.215 Sum_probs=58.6
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
...+|.+|++.+|||+||++.+ .+.|.+.. ....+..+-+..||. .|||||+++... +...+
T Consensus 27 ~~CgGtLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v 104 (227)
T 1iau_A 27 KRCGGFLIRDDFVLTAAHCWGS--SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAV 104 (227)
T ss_dssp EEEEEEEEETTEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEEcCCEEEECHHhCCC--ceEEEEccccccCCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEECCcccCCCce
Confidence 5689999999999999999975 46666521 123455554555654 599999998653 22346
Q ss_pred cceecCCCc---ccCCeEEEEecCC
Q 036586 214 SPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 214 ~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.|+.|.... ..++.+++.|+..
T Consensus 105 ~picLp~~~~~~~~g~~~~v~GwG~ 129 (227)
T 1iau_A 105 QPLRLPSNKAQVKPGQTCSVAGWGQ 129 (227)
T ss_dssp CCCCCCCTTCCCCTTCEEEEEESSC
T ss_pred ecccCCCCCCCCCCCCEEEEEEccc
Confidence 777776533 3578999999754
No 262
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=98.02 E-value=0.00017 Score=69.74 Aligned_cols=154 Identities=16% Similarity=0.130 Sum_probs=88.4
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC------CCcE-EEEEEEEEeC-------CCCeEEEEeccCc-cccCcc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG------SDTK-YLATVLSIGT-------ECDIALLTVKDDE-FWEGVS 214 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~------dg~~-~~a~vv~~d~-------~~DlAlLkv~~~~-~~~~l~ 214 (568)
...+|.+|++.+|||+||.+.....+.+.... +... ...+.+..++ ..|||||+++... +...+.
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~ 103 (234)
T 3s69_A 24 FFCSGTLINEEWVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIV 103 (234)
T ss_dssp EEEEEEEEETTEEEECGGGCCSSCEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTSSCCEEEEESSCCCCBTTBC
T ss_pred eEEeEEEeeCCEEEEchhhCCCCceEEecccccccccCCcceeeceEEEECCCccCCCCCcccEEEEeeCCcCCCCCcce
Confidence 56999999999999999999755444433210 1111 2233343343 3599999998653 224566
Q ss_pred ceecCCC-cccCCeEEEEecCCCCC--------CceEEEEEEeeeec-------------------c-c----ccCCCce
Q 036586 215 PVEFGDL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRMEI-------------------L-S----YVHGSTE 261 (568)
Q Consensus 215 ~~~l~~~-~~~g~~V~aiG~P~g~~--------~~svt~GiIs~~~~-------------------~-~----~~~ggsp 261 (568)
|+.|... ...++.+.+.|+..... ...+..-+++.-.. . . ..++|||
T Consensus 104 pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 183 (234)
T 3s69_A 104 PLSLPSSPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTLCAGILEGGKDTCGGDSGGP 183 (234)
T ss_dssp CCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTSCEEEEECTTCSCBCCTTCTTCE
T ss_pred eeecCCCCCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCcceEeccCCCCCCccCCCCCccc
Confidence 7777653 35689999999854211 01122223322100 0 0 0136779
Q ss_pred eecccceEEEEEeeeecCCCC-ccccccccchhhhHhHHHhhhc
Q 036586 262 LLGLQGKCVGIAFQSLKNDDV-ENIGYVIPTPVIIHFIQDYEKN 304 (568)
Q Consensus 262 L~n~~G~VVGI~~~~~~~~~~-~~~~~aIP~~~i~~~l~~l~~~ 304 (568)
|+- +++++||++.+...-+. ...+....+...++++++..+.
T Consensus 184 L~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 226 (234)
T 3s69_A 184 LIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAG 226 (234)
T ss_dssp EEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred eEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcC
Confidence 996 67899999875421111 1233445556666667665543
No 263
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.02 E-value=6.3e-06 Score=72.61 Aligned_cols=65 Identities=9% Similarity=0.034 Sum_probs=56.8
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccC-CCeEEEEEEcCeEEEEec
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSE-DEFLKFDLEYQQIVVLKS 542 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~-~~~v~l~v~R~~~~~l~~ 542 (568)
.+++|..|.+++++...+ ++.||+|++|||++|. +++++.++|+..+ +..+.|++.|++...++.
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~~~ 112 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYPLPFDP 112 (123)
T ss_dssp CCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCCCCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCCCCCC
Confidence 458999999998888777 7799999999999999 7899999999986 789999999998766554
No 264
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.01 E-value=1.3e-05 Score=70.70 Aligned_cols=60 Identities=7% Similarity=0.076 Sum_probs=52.5
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
..+++|..|.+++++...| ++.||+|++|||++|.+ ++++.++|+... +.+.|++.|...
T Consensus 58 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 120 (123)
T 2iwq_A 58 MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAG-NPVVFMVQSIIS 120 (123)
T ss_dssp CCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SSEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCc
Confidence 3579999999998887777 88999999999999998 999999999875 489999988653
No 265
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=98.01 E-value=0.00014 Score=70.40 Aligned_cols=86 Identities=22% Similarity=0.300 Sum_probs=58.3
Q ss_pred ceEEEEEEeCCEEEEcccccCCC--CeEEEEEcCC--------CcEEEEEEEEEeCC-------CCeEEEEeccCc-ccc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH--TQVKVKKRGS--------DTKYLATVLSIGTE-------CDIALLTVKDDE-FWE 211 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~--~~i~V~~~~d--------g~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~ 211 (568)
..++|.+|++.+|||+||++.+. ..+.|.+-.. ...+...-+..||. .|||||+++... +..
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~ 103 (228)
T 2xw9_A 24 HLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGP 103 (228)
T ss_dssp EEEEEEEEETTEEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCBT
T ss_pred eEEEEEEEeCCEEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeCCCcccCC
Confidence 56899999999999999999754 3677776211 23455554555554 599999998653 223
Q ss_pred CccceecCCC---cccCCeEEEEecCC
Q 036586 212 GVSPVEFGDL---PALQDAVTVVGYPI 235 (568)
Q Consensus 212 ~l~~~~l~~~---~~~g~~V~aiG~P~ 235 (568)
.+.|+.|... ...++.+.+.|+-.
T Consensus 104 ~v~pi~l~~~~~~~~~g~~~~v~GwG~ 130 (228)
T 2xw9_A 104 AVRPLPWQRVDRDVAPGTLCDVAGWGI 130 (228)
T ss_dssp TBCCCCBCCSCCCCCTTC-CEEEESSC
T ss_pred CeeecccCCcccCCCCCCEEEEEEecc
Confidence 4667777652 23568889999753
No 266
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.00 E-value=7.7e-06 Score=67.35 Aligned_cols=58 Identities=21% Similarity=0.142 Sum_probs=47.4
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHcc-CCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESS-EDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~-~~~~v~l~v~R~~~ 537 (568)
.+++++.+ +++++. .+++.||+|++|||++|.++ +++.++++.. ++..+.|++.|+++
T Consensus 27 ~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQTR 87 (88)
T ss_dssp SSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEECC
T ss_pred CcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeCCc
Confidence 35788887 777666 67889999999999999987 9999999864 57799999999764
No 267
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.00 E-value=1.2e-05 Score=68.40 Aligned_cols=60 Identities=10% Similarity=0.100 Sum_probs=52.3
Q ss_pred CcceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcC
Q 036586 476 DEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 476 ~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
...+++|..|.+++++...|++.||+|++|||+++.+ |+++.++++..++..+.|.+.|.
T Consensus 43 ~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 43 TDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp TCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEEC
T ss_pred CCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEcC
Confidence 3467999999999888777788999999999999965 77999999987788999999874
No 268
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.00 E-value=7.7e-06 Score=70.43 Aligned_cols=64 Identities=11% Similarity=0.144 Sum_probs=54.9
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccC-CCeEEEEEEcCeEEEEe
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSE-DEFLKFDLEYQQIVVLK 541 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~-~~~v~l~v~R~~~~~l~ 541 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.+ ++++.++|+..+ +..+.|.+.|++..++.
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~~ 106 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEAFHP 106 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCCCCCC
T ss_pred cCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCCccc
Confidence 468999999998887777 78999999999999965 699999999874 77999999998875543
No 269
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.99 E-value=3.3e-06 Score=80.41 Aligned_cols=73 Identities=16% Similarity=0.174 Sum_probs=58.4
Q ss_pred ceeeEEEEEcCCHHHHHhcCCCCCCCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCC--CCCCccccCccchHHHH
Q 036586 311 PILGVEWQKMENPDLRISMGMRPGQKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 386 (568)
Q Consensus 311 ~~lGi~~~~~~~~~~~~~lgl~~~~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~--~~dl~~~~~~~~~l~~~ 386 (568)
..+|+.+... +... ...|++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..+
T Consensus 119 ~~lG~~~~~~-~~~~--------~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~----------~~~~ 179 (196)
T 1p1d_A 119 VELGITISSP-SSRK--------PGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMED----------AVQI 179 (196)
T ss_dssp CCCCCEEECS-CSSS--------TTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHH----------HHHH
T ss_pred CCcCEEEECC-CCCC--------CCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 3578887665 2211 135899999999999999 9 99999999999999998 555 5667
Q ss_pred HhccCCCCEEEEEEEECC
Q 036586 387 VSQKYTGDSAVVKVLRNS 404 (568)
Q Consensus 387 l~~~~~g~~v~l~V~R~g 404 (568)
+... ++.+.|+|.|++
T Consensus 180 l~~~--~~~v~l~v~R~~ 195 (196)
T 1p1d_A 180 LQQC--EDLVKLKIRKDE 195 (196)
T ss_dssp HHHC--TTCEEEEEECCC
T ss_pred HHhC--CCEEEEEEEeCC
Confidence 7664 889999999986
No 270
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=97.99 E-value=9.8e-06 Score=66.87 Aligned_cols=59 Identities=14% Similarity=0.119 Sum_probs=50.9
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|. ++.++..+++.. ++.+.|++.|++.
T Consensus 27 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 27 VPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRAC-GERLSLGLSRAIT 87 (89)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTC-TTEEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeCCC
Confidence 4589999999988777778899999999999999 568999888876 6789999998764
No 271
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=97.98 E-value=0.00035 Score=67.24 Aligned_cols=84 Identities=21% Similarity=0.222 Sum_probs=58.5
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
...+|.+|++.+|||+||++. ..+.|.+.. ....+..+-+..+|. .|||||+++... +...+
T Consensus 28 ~~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~v 105 (227)
T 3fzz_A 28 MFCGGFLVRDKFVLTAAHCKG--RSMTVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRAV 105 (227)
T ss_dssp EEEEEEEEETTEEEECTTCCC--EEEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEEeCCEEEECcccCC--CCcEEEEcccccCCCCCCceEEEEEEEEECcCCCCCCCcCCEEEEEECCcCCCCCcc
Confidence 569999999999999999985 355665521 123455555556665 599999997653 22356
Q ss_pred cceecCCCc---ccCCeEEEEecCC
Q 036586 214 SPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 214 ~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.|+.|.... ..++.+++.|+-.
T Consensus 106 ~picLp~~~~~~~~~~~~~v~GwG~ 130 (227)
T 3fzz_A 106 RPLNLPRRNAHVKPGDECYVAGWGK 130 (227)
T ss_dssp CCCCCCCTTCCCCTTCEEEEEESSC
T ss_pred cccCCCCcccCCCCCCEEEEEECCc
Confidence 777776433 4578999999853
No 272
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=97.98 E-value=1.2e-05 Score=69.17 Aligned_cols=60 Identities=5% Similarity=-0.012 Sum_probs=53.0
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHcc--CCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESS--EDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~--~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||+++.+ ++++.++|+.. +.+.+.|++.|.+.
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 33 GGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp CEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCC
Confidence 569999999998887777 77999999999999999 99999999988 55679999998653
No 273
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=97.98 E-value=7.2e-06 Score=67.31 Aligned_cols=57 Identities=19% Similarity=0.296 Sum_probs=44.0
Q ss_pred CceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEE
Q 036586 336 KGVRIRRIEPTAPESH--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLR 402 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R 402 (568)
.+++|..|.++|||++ ||++||+|++|||+++.++.... +..++. ..++.+.|+|.+
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKE--------AVTILS--QQRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHH--------HHHHHH--HCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEE
Confidence 4799999999999996 99999999999999998764311 233443 357788888764
No 274
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=97.98 E-value=0.00023 Score=68.74 Aligned_cols=85 Identities=16% Similarity=0.212 Sum_probs=58.7
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC---------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccC
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG---------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEG 212 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~---------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~ 212 (568)
...+|.+|++.+|||+||++.+. +.|.+.. +...+...-+..||. .|||||+++... +...
T Consensus 24 ~~CgGsLIs~~~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 101 (223)
T 2bdg_A 24 LFCSGVLVHPQWVLSAAHCFQNS--YTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDT 101 (223)
T ss_dssp EEEEEEEEETTEEEECGGGCCSS--EEEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSSTTCSCCEEEEESSCCCCCSS
T ss_pred EEEEEEEecCCEEEEhHHhCCCC--eEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCCCcCcEEEEEECCcccCCCc
Confidence 56999999999999999999753 4444411 123455554555654 599999998653 2235
Q ss_pred ccceecCCC-cccCCeEEEEecCCC
Q 036586 213 VSPVEFGDL-PALQDAVTVVGYPIG 236 (568)
Q Consensus 213 l~~~~l~~~-~~~g~~V~aiG~P~g 236 (568)
+.|+.|... ...++.+++.|+...
T Consensus 102 v~pi~l~~~~~~~~~~~~v~GwG~~ 126 (223)
T 2bdg_A 102 IRSISIASQCPTAGNSCLVSGWGLL 126 (223)
T ss_dssp CCCCCBCSSCCCTTCEEEEEESCCC
T ss_pred eecccCCCCCCCCCCEEEEEeCccc
Confidence 677777653 356789999998643
No 275
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=97.98 E-value=0.00022 Score=69.34 Aligned_cols=149 Identities=15% Similarity=0.056 Sum_probs=85.6
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeC------------------CCCeEEEE
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGT------------------ECDIALLT 203 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~------------------~~DlAlLk 203 (568)
..++|.+|++.+|||+||++.+ .+.|.+.. ....+..+-+..|| ..|||||+
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~ 101 (237)
T 1ao5_A 24 HICGGVLLDRNWVLTAAHCYVD--QYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLR 101 (237)
T ss_dssp EEEEEEEEETTEEEECTTCCCS--SCEEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGGGCSSCCTTCCCTTCCEEEE
T ss_pred eEEEEEEeeCCEEEECHHHCCC--CCEEEecccccccCCCCcEEEEEEEEEcCCCcCcccccccccccccCCCCCEEEEE
Confidence 5699999999999999999963 44555421 12233333334444 57999999
Q ss_pred eccCc-cccCccceecCCCc-ccCCeEEEEecCCCCC------C--ceEEEEEEeeee------------------ccc-
Q 036586 204 VKDDE-FWEGVSPVEFGDLP-ALQDAVTVVGYPIGGD------T--ISVTSGVVSRME------------------ILS- 254 (568)
Q Consensus 204 v~~~~-~~~~l~~~~l~~~~-~~g~~V~aiG~P~g~~------~--~svt~GiIs~~~------------------~~~- 254 (568)
++... +...+.|+.|.... ..++.+.+.|+-.... . ..+..-+++.-. ...
T Consensus 102 L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~ 181 (237)
T 1ao5_A 102 LSKPADITDVVKPIALPTKEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQKVTDVMLCAGEMGGG 181 (237)
T ss_dssp ESSCCCCCSSSCCCCCCCSCCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECTTCS
T ss_pred eCCccccCCceeCCCcCCCCCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhhcccCCCCEEEEccCCCC
Confidence 98653 22356777776543 5678999999753211 0 112222332110 000
Q ss_pred ----ccCCCceeecccceEEEEEeeeecCCCC-ccccccccchhhhHhHHHh
Q 036586 255 ----YVHGSTELLGLQGKCVGIAFQSLKNDDV-ENIGYVIPTPVIIHFIQDY 301 (568)
Q Consensus 255 ----~~~ggspL~n~~G~VVGI~~~~~~~~~~-~~~~~aIP~~~i~~~l~~l 301 (568)
..++||||+- +|.++||++.+...-+. ...+....+....+++++.
T Consensus 182 ~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 232 (237)
T 1ao5_A 182 KDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDT 232 (237)
T ss_dssp CBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHH
T ss_pred CCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHH
Confidence 0136779997 68999999875211011 1223334455555555544
No 276
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=97.98 E-value=8.2e-05 Score=72.31 Aligned_cols=153 Identities=12% Similarity=0.118 Sum_probs=87.4
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC-----C--CcEEEEEEEEEeC-------CCCeEEEEeccCc-cccCcc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG-----S--DTKYLATVLSIGT-------ECDIALLTVKDDE-FWEGVS 214 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~-----d--g~~~~a~vv~~d~-------~~DlAlLkv~~~~-~~~~l~ 214 (568)
...+|.+|++.+|||+||.+.+...+.+-... + ...+..+-+..++ ..|||||+++... +...+.
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~ 102 (231)
T 2aiq_A 23 SLCGGTLINQEWVLTARHCDRGNMRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIA 102 (231)
T ss_dssp EEEEEEECSSSEEEECGGGCCSSCEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTTTCCEEEEESSCCCCBTTBC
T ss_pred CeEEEEEEeCCEEEEcHHcCCCCCEEEEecccccccCCCceEEEEEEEEEECCCCCCCCCCCCEEEEEecCCCCCCCcEE
Confidence 46999999999999999999874444332210 1 1223333333444 3599999998653 223567
Q ss_pred ceecCCCc-ccCCeEEEEecCCCCC------C--ceEEEEEEeeeec-----------------cc-----ccCCCceee
Q 036586 215 PVEFGDLP-ALQDAVTVVGYPIGGD------T--ISVTSGVVSRMEI-----------------LS-----YVHGSTELL 263 (568)
Q Consensus 215 ~~~l~~~~-~~g~~V~aiG~P~g~~------~--~svt~GiIs~~~~-----------------~~-----~~~ggspL~ 263 (568)
|+.|.... ..++.++++|+..... . ..+..-+++.-.. .. ..++||||+
T Consensus 103 picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~ 182 (231)
T 2aiq_A 103 PLSLPSNPPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKGLAATTLCAGILEGGKDTCKGDSGGPLI 182 (231)
T ss_dssp CCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCSSEEEEECTTCSCBCCTTCTTCEEE
T ss_pred eeECCCCCCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcCCCcCcEEeccCCCCCcccCCcCCCcEE
Confidence 77786533 5679999999864211 1 1122222221100 00 014677999
Q ss_pred cccceEEEEEeeeecC-CCCccccccccchhhhHhHHHhhh
Q 036586 264 GLQGKCVGIAFQSLKN-DDVENIGYVIPTPVIIHFIQDYEK 303 (568)
Q Consensus 264 n~~G~VVGI~~~~~~~-~~~~~~~~aIP~~~i~~~l~~l~~ 303 (568)
- +|+++||++.+... ......+....+...++++++..+
T Consensus 183 ~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 222 (231)
T 2aiq_A 183 C-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIIS 222 (231)
T ss_dssp E-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred E-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHc
Confidence 7 58999999875211 111222334455556666666543
No 277
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=97.97 E-value=1.2e-05 Score=70.74 Aligned_cols=59 Identities=12% Similarity=0.177 Sum_probs=52.4
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccC-CCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSE-DEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~-~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.+ ++++.++|+..+ +..+.|++.|++
T Consensus 58 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 468999999998887777 78999999999999998 699999999874 779999999986
No 278
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.97 E-value=1.5e-06 Score=84.34 Aligned_cols=60 Identities=23% Similarity=0.453 Sum_probs=51.4
Q ss_pred CceEEEEecCCCcccC-CCCCCCEEEEECCEEcC--CCCCCccccCccchHHHHHhccCCCCEE-EEEEEECCEEE
Q 036586 336 KGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSA-VVKVLRNSEVH 407 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~--~~~dl~~~~~~~~~l~~~l~~~~~g~~v-~l~V~R~g~~~ 407 (568)
.|++|..|.+++||++ ||++||+|++|||+.|. ++.+ +..++... |+.+ .|+|.|+|+..
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~d----------l~~~l~~~--g~~v~~l~V~R~g~~~ 96 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGD----------VVSAIRAG--GDETKLLVVDRETDEF 96 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHH----------HHHHHHHH--CSEEEEEECCHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhc--CCeEEEEEEEECCEEE
Confidence 4899999999999999 99999999999999999 6655 45566554 7888 99999998765
No 279
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=97.97 E-value=7.7e-06 Score=76.42 Aligned_cols=59 Identities=10% Similarity=0.204 Sum_probs=47.8
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
..|++|..|.+++||++ | |++||+|++|||+.|.+..... +..++.. .|..|.|+|.|+
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~--------~~~~l~~--~g~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSF--------AASVLRN--TKGRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHH--------HHHHHHH--CCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCEEEEEEEeC
Confidence 46899999999999999 9 9999999999999997654311 3344443 678999999985
No 280
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.97 E-value=4.9e-06 Score=70.85 Aligned_cols=60 Identities=12% Similarity=0.159 Sum_probs=53.9
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
.+++|..|.+++++...+++.||+|++|||++|.+ ++++.++|+.. ++.+.|++.|+++.
T Consensus 29 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~g~~ 90 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA-SYQLCLKIDRAETR 90 (103)
T ss_dssp EEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC-CSEEECEECCCTTT
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEECCeE
Confidence 35889999999888777888999999999999999 99999999988 88999999998753
No 281
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=97.97 E-value=0.00012 Score=71.56 Aligned_cols=152 Identities=16% Similarity=0.127 Sum_probs=82.8
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEc------CCCcEEEEEEEEEeC------------------CCCeEEEEec
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKR------GSDTKYLATVLSIGT------------------ECDIALLTVK 205 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~------~dg~~~~a~vv~~d~------------------~~DlAlLkv~ 205 (568)
..++|.+|++.+|||+||++.+.-.+.+-.. ..+..+..+-+..|+ ..|||||+++
T Consensus 27 ~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~ 106 (240)
T 1sgf_A 27 YQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLS 106 (240)
T ss_dssp CCEEEEECSSSEEEECGGGCCSCCEEEECC----C-CTTCEEEEEEEEEECTTSCGGGC----CCTTCBCTTCCEEEEES
T ss_pred eEEEEEEecCCEEEECHHhCCCCceEEeCCcccccCCCCceEEEEEEEEcCCCCcccccccccccccCCCCCceEEEEeC
Confidence 5699999999999999999985433332110 112334444334443 3699999998
Q ss_pred cCc-cccCccceecCCCc-ccCCeEEEEecCCCCC--------CceEEEEEEeeeec------------------cc---
Q 036586 206 DDE-FWEGVSPVEFGDLP-ALQDAVTVVGYPIGGD--------TISVTSGVVSRMEI------------------LS--- 254 (568)
Q Consensus 206 ~~~-~~~~l~~~~l~~~~-~~g~~V~aiG~P~g~~--------~~svt~GiIs~~~~------------------~~--- 254 (568)
... +...+.|+.|.... ..++.+++.|+-.... ...+..-+++.-.. ..
T Consensus 107 ~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~ 186 (240)
T 1sgf_A 107 KPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSY 186 (240)
T ss_dssp SCCCCCSSCCCCCCCCSCCCTTCEEEEC-------C---------CEEEEEECTHHHHTTCSSBCCTTEEEEEECSSSEE
T ss_pred CcCcCCCcccccCCCCCCCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHHHhhhhhCCCcCCCeEeEccCCCCCC
Confidence 653 22356778886533 5678899988753211 01122233322100 00
Q ss_pred --ccCCCceeecccceEEEEEeeeecCCCC-ccccccccchhhhHhHHHhh
Q 036586 255 --YVHGSTELLGLQGKCVGIAFQSLKNDDV-ENIGYVIPTPVIIHFIQDYE 302 (568)
Q Consensus 255 --~~~ggspL~n~~G~VVGI~~~~~~~~~~-~~~~~aIP~~~i~~~l~~l~ 302 (568)
..++||||+- +|.++||++.+...-+. ...+....+...++++++..
T Consensus 187 ~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 236 (240)
T 1sgf_A 187 TCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETM 236 (240)
T ss_dssp ECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHH
T ss_pred CCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHH
Confidence 0146779997 78999999874211011 12233344555556665544
No 282
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=97.96 E-value=1.7e-05 Score=64.68 Aligned_cols=57 Identities=7% Similarity=0.079 Sum_probs=49.4
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccC-CCeEEEEEEc
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSE-DEFLKFDLEY 534 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~-~~~v~l~v~R 534 (568)
.+++|..|.+++++...+ ++.||+|++|||++|. +++++.++|+..+ ++.+.|++.|
T Consensus 25 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 25 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp BCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 358999999998887777 7799999999999999 5799999999876 6788888876
No 283
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=97.96 E-value=1e-05 Score=71.57 Aligned_cols=60 Identities=13% Similarity=0.035 Sum_probs=52.8
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHc-cCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVES-SEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~-~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|.++ +++.++|.. .++..+.|++.|++.
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 113 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 113 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 468999999998888777889999999999999999 999998887 567799999999764
No 284
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.96 E-value=5.1e-06 Score=89.46 Aligned_cols=63 Identities=14% Similarity=0.237 Sum_probs=52.2
Q ss_pred CCceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.++|||++ ||++||+|++|||+.|.+...-. +..++.....|+.+.|+|.|+|+
T Consensus 22 ~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e--------~~~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 22 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREE--------AVLFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp TTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHH--------HHHHHHHSCTTSEEEEEEEECHH
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhcCCCCEEEEEEEECCc
Confidence 35899999999999999 99999999999999998742210 45566666689999999999764
No 285
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=97.96 E-value=1.4e-05 Score=67.38 Aligned_cols=58 Identities=10% Similarity=-0.005 Sum_probs=51.9
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
+++|..|.+++++...+++.||+|++|||++|. +++++..+++ .++..+.|++.|++.
T Consensus 35 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~-~~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLL-KSGNKISLRTTALEN 94 (99)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEECSCS
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh-cCCCEEEEEEEECCC
Confidence 688999999988877778899999999999999 8999999999 457899999999764
No 286
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=97.96 E-value=7.6e-06 Score=72.19 Aligned_cols=58 Identities=12% Similarity=0.178 Sum_probs=45.9
Q ss_pred CCceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEE
Q 036586 335 QKGVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLR 402 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R 402 (568)
..+++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .++.+.|+|.|
T Consensus 44 ~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~r 103 (125)
T 3hpk_A 44 CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVE--------VAKMIQE--VKGEVTIHYNK 103 (125)
T ss_dssp CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--SCSEEEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEE
Confidence 35799999999999999 9 9999999999999998643211 3444544 45679999988
No 287
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=97.96 E-value=1.2e-05 Score=70.37 Aligned_cols=60 Identities=10% Similarity=0.125 Sum_probs=52.6
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
.+++|+.|.+++++...+ ++.||+|++|||++|. ++.++.++++...+ .+.|++.|+++.
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~-~v~l~v~R~g~~ 115 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTKG-TVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS-SEEEEEEECSCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEEeCCcc
Confidence 468999999998887776 7799999999999999 89999999998654 599999998764
No 288
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=97.95 E-value=7.9e-06 Score=67.66 Aligned_cols=60 Identities=7% Similarity=0.039 Sum_probs=51.8
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|.+ +.++.++++..++..+.+.+.|++.
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r~~~ 88 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETD 88 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcCCcc
Confidence 35899999999888777788999999999999998 7899999998876677777777764
No 289
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.95 E-value=2.2e-06 Score=74.94 Aligned_cols=63 Identities=19% Similarity=0.278 Sum_probs=47.2
Q ss_pred CceEEEEecCCCcccC---CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCC--CCEEEEEEEECCEE
Q 036586 336 KGVRIRRIEPTAPESH---VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYT--GDSAVVKVLRNSEV 406 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~---GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~--g~~v~l~V~R~g~~ 406 (568)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++..... +..+.|+|.|+...
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~--------~~~~~~~~~~~~~~~v~l~v~R~~~~ 108 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQ--------VVLFIKASCERHSGELMLLVRPNAVY 108 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHH--------HHHHHHHHHHCCSSCEEEEEECCCCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhccccCCCEEEEEEEccccc
Confidence 4799999999999988 89999999999999998764311 2333333211 35899999998643
No 290
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=97.95 E-value=0.00029 Score=67.66 Aligned_cols=124 Identities=15% Similarity=0.132 Sum_probs=77.1
Q ss_pred ceEEEEEEeCCEEEEcccccCCC--CeEEEEEcCC--------CcEEEEEEEEEe------CCCCeEEEEeccCc-cccC
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH--TQVKVKKRGS--------DTKYLATVLSIG------TECDIALLTVKDDE-FWEG 212 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~--~~i~V~~~~d--------g~~~~a~vv~~d------~~~DlAlLkv~~~~-~~~~ 212 (568)
...+|.+|++.+|||+||++.+. ..+.|.+-.. ...+..+-+..+ ...|||||+++... +...
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~~~ 103 (218)
T 2z7f_E 24 HFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNGSATINAN 103 (218)
T ss_dssp EEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESSCCCCSSS
T ss_pred cEEEEEEccCCEEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECCcCcCCCc
Confidence 56899999999999999999864 3567766211 134444433333 34699999998653 2235
Q ss_pred ccceecCCCc---ccCCeEEEEecCCCCCC-------ceEEEEEEeeee----------cc----c-ccCCCceeecccc
Q 036586 213 VSPVEFGDLP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRME----------IL----S-YVHGSTELLGLQG 267 (568)
Q Consensus 213 l~~~~l~~~~---~~g~~V~aiG~P~g~~~-------~svt~GiIs~~~----------~~----~-~~~ggspL~n~~G 267 (568)
+.|+.|.... ..++.+++.|+...... ..+..-++ .-. .. . ..++||||+- +|
T Consensus 104 v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~~~~Ca~~~~~~~~~C~GDSGgPl~~-~~ 181 (218)
T 2z7f_E 104 VQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCRRSNVCTLVRGRQAGVCFGDSGSPLVC-NG 181 (218)
T ss_dssp CCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCCTTSEEEECTTSCCBCCTTCTTCEEEE-TT
T ss_pred eeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcCcceeeeccCCCCCeeCCCcCCCceEE-cc
Confidence 6777776533 34688999998543211 11222222 110 00 0 1146779996 68
Q ss_pred eEEEEEee
Q 036586 268 KCVGIAFQ 275 (568)
Q Consensus 268 ~VVGI~~~ 275 (568)
.++||.+.
T Consensus 182 ~l~Gi~S~ 189 (218)
T 2z7f_E 182 LIHGIASF 189 (218)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99999987
No 291
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=97.95 E-value=0.00015 Score=70.48 Aligned_cols=86 Identities=17% Similarity=0.169 Sum_probs=59.6
Q ss_pred ceEEEEEEeCCEEEEcccccCCC--------CeEEEEEcC---------CCcEEEEEEEEEeC-------CCCeEEEEec
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH--------TQVKVKKRG---------SDTKYLATVLSIGT-------ECDIALLTVK 205 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~--------~~i~V~~~~---------dg~~~~a~vv~~d~-------~~DlAlLkv~ 205 (568)
...+|.+|++.+|||+||++.+. ..+.|.+.. ....+..+-+..++ ..|||||+++
T Consensus 25 ~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 104 (241)
T 3ncl_A 25 HICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELE 104 (241)
T ss_dssp EEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred eEEEEEEeeCCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEEEECCCCCCCCCCCcEEEEEEC
Confidence 46999999999999999999642 356666521 12445555556666 4699999998
Q ss_pred cCc-cccCccceecCCCc---ccCCeEEEEecCC
Q 036586 206 DDE-FWEGVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 206 ~~~-~~~~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
... +...+.|+.|.... ..++.+.+.|+-.
T Consensus 105 ~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~ 138 (241)
T 3ncl_A 105 KPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGH 138 (241)
T ss_dssp SCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSB
T ss_pred CCCcccCccCceEcCCcccCCCCCCEEEEEEecc
Confidence 653 23356677775432 3578999999853
No 292
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=97.95 E-value=1.2e-05 Score=70.29 Aligned_cols=61 Identities=8% Similarity=0.185 Sum_probs=53.6
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
..+++|..|.+++++...| ++.||+|++|||++|. +++++.++++.. +..++|++.|++..
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~~~ 116 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT-SEVVYLKVGKPTTI 116 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCcc
Confidence 3569999999998887777 7899999999999999 899999999976 67899999998763
No 293
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=97.95 E-value=1.4e-05 Score=68.96 Aligned_cols=60 Identities=13% Similarity=0.122 Sum_probs=53.8
Q ss_pred ceEEEEEEecccccccccc-ccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEE-IVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~-~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...++ +.||+|++|||+++.+ ++++.++++..++..+.|.+.|++.
T Consensus 26 ~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~ 88 (112)
T 1qau_A 26 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPE 88 (112)
T ss_dssp SCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEECCT
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEeCCc
Confidence 3589999999988877776 7999999999999999 9999999999888899999999874
No 294
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=97.95 E-value=0.00013 Score=71.09 Aligned_cols=84 Identities=18% Similarity=0.201 Sum_probs=57.0
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC------------------CCeEEEE
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE------------------CDIALLT 203 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~------------------~DlAlLk 203 (568)
..++|.+|++.+|||+||++.+ .+.|.+.. ....+..+-+..+|. .|||||+
T Consensus 24 ~~CgGsLIs~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~ 101 (238)
T 1spj_A 24 FQCGGILVHRQWVLTAAHCISD--NYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLR 101 (238)
T ss_dssp EEEEEEEEETTEEEECGGGCCS--SEEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGCC--CTTTCCCTTCCEEEE
T ss_pred eeEEEEEecCCEEEEcHHhCCC--CceEEEEeccccCCCCCceEEEEEEEEcCCCccccccccccccccccCCCCeEEEE
Confidence 5699999999999999999975 34555411 123344443444443 5999999
Q ss_pred eccCc--cccCccceecCCC-cccCCeEEEEecCC
Q 036586 204 VKDDE--FWEGVSPVEFGDL-PALQDAVTVVGYPI 235 (568)
Q Consensus 204 v~~~~--~~~~l~~~~l~~~-~~~g~~V~aiG~P~ 235 (568)
++... +...+.|+.|... ...++.+++.|+-.
T Consensus 102 L~~~~~~~~~~v~pi~L~~~~~~~~~~~~v~GwG~ 136 (238)
T 1spj_A 102 LTEPADTITDAVKVVELPTEEPEVGSTCLASGWGS 136 (238)
T ss_dssp ESSCCCCSSTTCCCCCCCSSCCCTTCEEEEEESSC
T ss_pred ECccccccCCceeeccCCCCCCCCCCEEEEEecCC
Confidence 98653 2345677777653 35678999999753
No 295
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=97.94 E-value=0.00014 Score=70.37 Aligned_cols=163 Identities=14% Similarity=0.033 Sum_probs=91.8
Q ss_pred ceEEEEeEeecCCCCCcccccCCCcceEEEEEEe---CCEEEEcccccCCC------CeEEEEEcCC-C----cEEEEEE
Q 036586 125 AVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVG---GRRVLTNAHSVEHH------TQVKVKKRGS-D----TKYLATV 190 (568)
Q Consensus 125 sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~---~G~ILTn~HVV~~~------~~i~V~~~~d-g----~~~~a~v 190 (568)
.+++|..... .....++|.+|+ +.+|||+||++.+. ..+.|..... . ..+.++-
T Consensus 8 ~~g~l~~~~~------------~~~~~CgGslI~s~s~~~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~ 75 (218)
T 3cp7_A 8 HIGKVFFSTN------------QGDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEE 75 (218)
T ss_dssp TEEEEEEEET------------TEEEEEEEEEBCCTTSCEEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEEEE
T ss_pred eEEEEEEEcC------------CCCeEEEEEEEecCCCCEEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEEEE
Confidence 7888876421 112569999998 89999999999653 2455554211 1 1344433
Q ss_pred EEEe--------CCCCeEEEEeccC---ccccCcc-ceecCCCcccCCeEEEEecCCCCC----CceEEEEE-Eee-ee-
Q 036586 191 LSIG--------TECDIALLTVKDD---EFWEGVS-PVEFGDLPALQDAVTVVGYPIGGD----TISVTSGV-VSR-ME- 251 (568)
Q Consensus 191 v~~d--------~~~DlAlLkv~~~---~~~~~l~-~~~l~~~~~~g~~V~aiG~P~g~~----~~svt~Gi-Is~-~~- 251 (568)
+..+ ...|||||+++.. .+...+. ++.|......++.+.+.|++.... .+...... ... +.
T Consensus 76 ~~~hp~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~~~~g~~~~v~GwG~~~~~~~~~l~~C~~~~~~~~~~~ 155 (218)
T 3cp7_A 76 LVTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQPRGQYYSAYGYPAAAPFNGQELHSCHGTATNDPMGS 155 (218)
T ss_dssp EEECHHHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCSCCSSCEEEEEECCCSTTCCSSSCEEEEEECEECTTSS
T ss_pred EEECcccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeecCCCCCEEEEEeCCCCCCCCCceeeEeeeeEEcCCCCC
Confidence 3332 3469999999876 1212233 555544334578999999986421 11111221 110 00
Q ss_pred ------cc-cccCCCceeecc---cceEEEEEeeeecCCCCccccccccc-hhhhHhHHHh
Q 036586 252 ------IL-SYVHGSTELLGL---QGKCVGIAFQSLKNDDVENIGYVIPT-PVIIHFIQDY 301 (568)
Q Consensus 252 ------~~-~~~~ggspL~n~---~G~VVGI~~~~~~~~~~~~~~~aIP~-~~i~~~l~~l 301 (568)
.. ....+||||+.. .+.++||++.+.. -.....|+-.. +.++.+++..
T Consensus 156 ~~~~~~Ca~~~GDSGGPlv~~~~g~~~lvGIvS~G~g--c~~~~~~~p~~~~~~~~l~~~a 214 (218)
T 3cp7_A 156 STQGIPCNMTGGSSGGPWFLGNGTGGAQNSTNSYGYT--FLPNVMFGPYFGSGAQQNYNYA 214 (218)
T ss_dssp SCEEEECCCCTTCTTCEEEESSSSSSCEEEECCEEET--TEEEEEEECCCCHHHHHHHHHH
T ss_pred ceEEecCCCCCCCcCCeeEEccCCCeEEEEEEccccC--CCCCcEEcCcCCHHHHHHHHHH
Confidence 00 012467799865 3799999988653 22333444332 5566666554
No 296
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.94 E-value=1.6e-06 Score=76.03 Aligned_cols=59 Identities=12% Similarity=0.099 Sum_probs=46.2
Q ss_pred ceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccC--CCCEEEEEEEEC
Q 036586 337 GVRIRRIEPTAPESH--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKY--TGDSAVVKVLRN 403 (568)
Q Consensus 337 Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~--~g~~v~l~V~R~ 403 (568)
.++|..|.++|||++ ||++||+|++|||+.+.++..-. +..++.... .|+.++|+|.|.
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~--------~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAE--------AEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHH--------HHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHHhhhcCCCeEEEEEEeC
Confidence 499999999999987 79999999999999998754100 334454432 388999999984
No 297
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=97.93 E-value=0.00011 Score=70.79 Aligned_cols=86 Identities=22% Similarity=0.302 Sum_probs=61.4
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcC-----CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRG-----SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~-----dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
...+|.+|++.+|||+||++.+. ..+.|.+.. ++..+..+-+..++. .|||||+++... +...+
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v 103 (222)
T 1eq9_A 24 HRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLV 103 (222)
T ss_dssp EEEEEEECSSSEEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTTBCCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEeeCCEEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCce
Confidence 56999999999999999999763 467777621 234555555555653 699999998653 22356
Q ss_pred cceecCCCc--ccCCeEEEEecCC
Q 036586 214 SPVEFGDLP--ALQDAVTVVGYPI 235 (568)
Q Consensus 214 ~~~~l~~~~--~~g~~V~aiG~P~ 235 (568)
.|+.|.... ..++.+.+.|+-.
T Consensus 104 ~picL~~~~~~~~~~~~~v~GwG~ 127 (222)
T 1eq9_A 104 QPIKLSTNDEDLESNPCTLTGWGS 127 (222)
T ss_dssp CCCEECSCCTTCTTSEEEEEECCC
T ss_pred EccCCCCCCcCCCCCEEEEEcccc
Confidence 788886543 3568899999754
No 298
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=97.92 E-value=8.2e-06 Score=69.91 Aligned_cols=59 Identities=10% Similarity=0.073 Sum_probs=52.1
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.+ +.++.++++. .+..+.|++.|++.
T Consensus 44 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 44 TGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN-AGNPVRLLLIRRLP 105 (108)
T ss_dssp CCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH-HCSEEEEEEEECCC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCc
Confidence 468999999998887777 77999999999999998 7899999988 67899999999874
No 299
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.92 E-value=8.1e-06 Score=69.46 Aligned_cols=60 Identities=10% Similarity=0.206 Sum_probs=52.3
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccC-CCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSE-DEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~-~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.+ ++++.++|+..+ +..+.|++.|++.
T Consensus 34 ~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 34 QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCCC
Confidence 347899999998887777 88999999999999965 899999999876 7899999998753
No 300
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=97.91 E-value=7.8e-06 Score=68.50 Aligned_cols=62 Identities=11% Similarity=0.101 Sum_probs=50.2
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHc-cCCCeEEEEEEcCeEE
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVES-SEDEFLKFDLEYQQIV 538 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~-~~~~~v~l~v~R~~~~ 538 (568)
..+++|..|.+++++...+++.||+|++|||++|.++.++..++.. .++..+.|++.|+++.
T Consensus 33 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 33 DEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERET 95 (97)
T ss_dssp BCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECCSSC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeCCcc
Confidence 3569999999998887777889999999999999998775443322 2678999999998753
No 301
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=97.91 E-value=0.00034 Score=68.33 Aligned_cols=86 Identities=19% Similarity=0.178 Sum_probs=60.1
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC---------CCeEEEEeccCc-ccc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE---------CDIALLTVKDDE-FWE 211 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~---------~DlAlLkv~~~~-~~~ 211 (568)
..++|.+|++.+|||+||++.....+.|.+-. ....+..+-+..||. .|||||+++... +..
T Consensus 28 ~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~ 107 (241)
T 1bru_P 28 HTCGGTLVDQSWVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTD 107 (241)
T ss_dssp EEEEEEEEETTEEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCCS
T ss_pred eEEEeEEeeCCEEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEEeCCCcccCC
Confidence 46999999999999999999855677787721 123455544445543 799999998653 223
Q ss_pred CccceecCCCc---ccCCeEEEEecCC
Q 036586 212 GVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 212 ~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.+.|+.|.... ..++.+++.|+-.
T Consensus 108 ~v~picLp~~~~~~~~~~~~~v~GwG~ 134 (241)
T 1bru_P 108 KIQLGCLPAAGTILPNNYVCYVTGWGR 134 (241)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred ccCCcccCCCcCCCCCCCEEEEEEccc
Confidence 56777776532 3468899999754
No 302
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=97.90 E-value=2.1e-05 Score=65.73 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=51.4
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|. ++.++..+++. .+..+.|.+.|++.
T Consensus 33 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 33 GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN-TGQVVHLLLEKGQS 94 (96)
T ss_dssp SCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEECCSC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEcCCC
Confidence 468999999998887777 7799999999999999 77999999987 56789999999764
No 303
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=97.90 E-value=0.00034 Score=68.24 Aligned_cols=86 Identities=17% Similarity=0.202 Sum_probs=60.7
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeC---------CCCeEEEEeccCc-ccc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGT---------ECDIALLTVKDDE-FWE 211 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~---------~~DlAlLkv~~~~-~~~ 211 (568)
...+|.+|++.+|||+||++.....+.|.+-. ....+..+=+..|| ..|||||+++... +..
T Consensus 28 ~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~ 107 (240)
T 1gvk_B 28 HTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNS 107 (240)
T ss_dssp EEEEEEEEETTEEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCBT
T ss_pred ceEEEEEeeCCEEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEEECCccccCC
Confidence 46899999999999999999887778887721 12344444444555 5699999998653 223
Q ss_pred CccceecCCCc---ccCCeEEEEecCC
Q 036586 212 GVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 212 ~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.+.|+.|.... ..++.+.+.|+-.
T Consensus 108 ~v~pi~lp~~~~~~~~~~~~~v~GwG~ 134 (240)
T 1gvk_B 108 YVQLGVLPRAGTILANNSPCYITGWGL 134 (240)
T ss_dssp TBCCCCCCCTTCCCCTTCCEEEEESCB
T ss_pred CccceecCCCCCCCCCCCEEEEEecCc
Confidence 46677776432 3468899999754
No 304
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=97.90 E-value=1.8e-05 Score=68.31 Aligned_cols=57 Identities=7% Similarity=-0.028 Sum_probs=50.3
Q ss_pred EEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 480 VVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 480 vvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
++|..|.+++++...|++.||+|++|||++|. +++++.++|+...+..+.|++.|..
T Consensus 46 v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 46 VQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSLL 104 (109)
T ss_dssp CEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESCC
T ss_pred eEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEECC
Confidence 68999999888877788899999999999999 7799999999887777999998753
No 305
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=97.90 E-value=2.6e-05 Score=65.31 Aligned_cols=58 Identities=17% Similarity=0.270 Sum_probs=51.1
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcC
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
..+++|..|.+++++...+++.||+|++|||++|.+ ++++.++|+... +.+.|++.|+
T Consensus 36 ~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~~ 95 (96)
T 2ego_A 36 EMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKASG-NVLRLETLYG 95 (96)
T ss_dssp CEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHTT-TEEEEEEECC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEEC
Confidence 357899999999888877888999999999999999 699999999984 5899998875
No 306
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=97.90 E-value=9.3e-06 Score=66.28 Aligned_cols=57 Identities=12% Similarity=0.160 Sum_probs=48.8
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCe
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
+++|+.|.+++++...+++.||+|++|||+++.++ .++...++... +.+.|.+.|++
T Consensus 26 ~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~ 84 (85)
T 1rgw_A 26 PLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSAS-YNLSLTLQKSK 84 (85)
T ss_dssp CCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTCS-SCEEEEEESCC
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcCC-CeEEEEEEeCC
Confidence 47899999988877777889999999999999988 78888887654 56999999976
No 307
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=97.90 E-value=0.00039 Score=67.71 Aligned_cols=86 Identities=15% Similarity=0.122 Sum_probs=59.3
Q ss_pred ceEEEEEEeCCEEEEcccccCC---CCeEEEEEcCC--------CcEEEEEEEEEeCC-------CCeEEEEeccCc-cc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH---HTQVKVKKRGS--------DTKYLATVLSIGTE-------CDIALLTVKDDE-FW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~---~~~i~V~~~~d--------g~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~ 210 (568)
...+|.+|++.+|||+||++.. ...+.|.+... ...+..+-+..++. .|||||+++... +.
T Consensus 26 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~ 105 (240)
T 1mza_A 26 HVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKLN 105 (240)
T ss_dssp EEEEEEEEETTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEESSCCCCB
T ss_pred eEEEEEEecCCEEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeCCCcccC
Confidence 5699999999999999999864 45677776211 23455544445543 699999998653 22
Q ss_pred cCccceecCCC--cccCCeEEEEecCC
Q 036586 211 EGVSPVEFGDL--PALQDAVTVVGYPI 235 (568)
Q Consensus 211 ~~l~~~~l~~~--~~~g~~V~aiG~P~ 235 (568)
..+.|+.|... ...++.+++.|+-.
T Consensus 106 ~~v~pi~l~~~~~~~~~~~~~v~GwG~ 132 (240)
T 1mza_A 106 KHVKMLHIRSKTSLRSGTKCKVTGWGA 132 (240)
T ss_dssp TTBCCCCBCSSCCCCTTCEEEEEECCC
T ss_pred CceeeeecCCcccCCCCCEEEEEeCCc
Confidence 35677777652 24578899999753
No 308
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=97.89 E-value=0.00029 Score=68.74 Aligned_cols=86 Identities=17% Similarity=0.259 Sum_probs=60.1
Q ss_pred ceEEEEEEeCCEEEEcccccCC----------------CCeEEEEEcC--------CCcEEEEEEEEEeCC-------CC
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH----------------HTQVKVKKRG--------SDTKYLATVLSIGTE-------CD 198 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~----------------~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~D 198 (568)
..++|.+|++.+|||+||++.+ ...+.|.+.. ....+..+-+..+|. .|
T Consensus 25 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~D 104 (251)
T 3gov_B 25 PFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFEND 104 (251)
T ss_dssp EEEEEEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCEEECEEEEEECTTCBTTTTBTC
T ss_pred eeEEEEEecCCEEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcceEeeeEEEEECCCCCCCCCCCC
Confidence 4699999999999999999954 2457777621 123444554556665 59
Q ss_pred eEEEEeccCc-cccCccceecCCCc-ccCCeEEEEecCC
Q 036586 199 IALLTVKDDE-FWEGVSPVEFGDLP-ALQDAVTVVGYPI 235 (568)
Q Consensus 199 lAlLkv~~~~-~~~~l~~~~l~~~~-~~g~~V~aiG~P~ 235 (568)
||||++.... +...+.|+.|.... ..++.+.+.|+-.
T Consensus 105 IAll~L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~ 143 (251)
T 3gov_B 105 VALVELLESPVLNAFVMPICLPEGPQQEGAMVIVSGWGK 143 (251)
T ss_dssp CEEEEESSCCCCSSSCCCCBCCSSCCCTTCEEEEEECSC
T ss_pred EEEEEeCCcccCCCceEEeECCCCCCCCCCEEEEEcCCC
Confidence 9999997653 22356677776543 5678899999854
No 309
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=97.89 E-value=2.5e-05 Score=66.17 Aligned_cols=57 Identities=12% Similarity=0.144 Sum_probs=50.4
Q ss_pred eEEEEEEeccccccc-cccccCcEEEeeCCEec--CCHHHHHHHHHcc-CCCeEEEEEEcC
Q 036586 479 IVVVSQVLVADINIG-YEEIVNTQVLALNGKPV--QNLKSLADMVESS-EDEFLKFDLEYQ 535 (568)
Q Consensus 479 gvvvs~V~~~~~~~g-~~~~~gd~I~~VNg~pV--~~l~~f~~~l~~~-~~~~v~l~v~R~ 535 (568)
+++|..|.+++++.. .+++.||+|++|||++| .+++++.++|+.. ++..+.|++.|.
T Consensus 38 ~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 38 TAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp CEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 489999999888776 45779999999999999 8999999999987 577999999885
No 310
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.89 E-value=2.8e-05 Score=65.36 Aligned_cols=57 Identities=14% Similarity=0.039 Sum_probs=48.0
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccC-CCeEEEEEEcCeE
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSE-DEFLKFDLEYQQI 537 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~-~~~v~l~v~R~~~ 537 (568)
+++|..|.+++ ...+++.||+|++|||++|.+ ++++.++|+..+ +..+.|++.|++.
T Consensus 33 Gv~V~~v~~~a--~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 33 GQRVKQILDIQ--GCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp EEEEEEESCGG--GSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCSS
T ss_pred CEEEEEEeccc--ccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCC
Confidence 58899998853 445566999999999999986 599999999986 8899999999864
No 311
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=97.89 E-value=0.00047 Score=66.71 Aligned_cols=86 Identities=20% Similarity=0.218 Sum_probs=61.2
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcCCC------cEEEEEEEEEeC-------CCCeEEEEeccCccccCccce
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGSD------TKYLATVLSIGT-------ECDIALLTVKDDEFWEGVSPV 216 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~dg------~~~~a~vv~~d~-------~~DlAlLkv~~~~~~~~l~~~ 216 (568)
..++|.+|++.+|||+||++.+...+.|.+. .. ..+..+-+..++ ..|||||++++..+...+.|+
T Consensus 28 ~~CgGtLIs~~~VLTAAHC~~~~~~~~v~~G-~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~v~pi 106 (230)
T 2hlc_A 28 VWCGGSLIDNKWILTAAHCVHDAVSVVVYLG-SAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIPHVEYTDNIQPI 106 (230)
T ss_dssp EEEEEEEEETTEEEECHHHHTTEEEEEEEES-CSBTTCCSEEEECSEEEECTTCBTTTTBTCCEEEECSCCCCCSSCCCC
T ss_pred EEEEEEEeeCCEEEECHHHCCCCcceEEEEe-eeecCCCCeEEEEEEEEECCCCCCCCccccEEEEEecCCCcCCcEeee
Confidence 5699999999999999999988777888773 32 334443344454 369999999843334567788
Q ss_pred ecCCCc-----ccCCeEEEEecCCC
Q 036586 217 EFGDLP-----ALQDAVTVVGYPIG 236 (568)
Q Consensus 217 ~l~~~~-----~~g~~V~aiG~P~g 236 (568)
.|.... ..++.+.+.|+...
T Consensus 107 cLp~~~~~~~~~~~~~~~v~GwG~~ 131 (230)
T 2hlc_A 107 RLPSGEELNNKFENIWATVSGWGQS 131 (230)
T ss_dssp BCCCGGGGGCCCTTCEEEEEESSCC
T ss_pred EcCCccccccccCCcEEEEEeeeec
Confidence 886543 24588999997543
No 312
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.89 E-value=1.3e-05 Score=70.41 Aligned_cols=59 Identities=14% Similarity=0.281 Sum_probs=53.1
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccC-CCeEEEEEEcCeE
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSE-DEFLKFDLEYQQI 537 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~-~~~v~l~v~R~~~ 537 (568)
.++|..|.+++++...+ ++.||+|++|||++|.+ +++|.++|+..+ ++.+.|++.|++.
T Consensus 46 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 46 PPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVA 108 (122)
T ss_dssp CCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred CcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECCc
Confidence 37899999998888777 78999999999999988 999999999987 7899999999875
No 313
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=97.89 E-value=2.7e-05 Score=67.38 Aligned_cols=57 Identities=18% Similarity=0.237 Sum_probs=48.3
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCHHH--HHHHHHccCCCeEEEEEEcC-e
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKS--LADMVESSEDEFLKFDLEYQ-Q 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~--f~~~l~~~~~~~v~l~v~R~-~ 536 (568)
.+++|..|.+++++...+++.||+|++|||++|.++.+ +..+++.. +.+.|++.|+ +
T Consensus 41 ~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~--~~v~l~v~r~~g 100 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS--RSLTISIVAAAG 100 (114)
T ss_dssp CSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC--SSEEEEECSSTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC--CeEEEEEEcCCC
Confidence 35899999998888777888999999999999999854 77777764 5789999887 6
No 314
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=97.88 E-value=1.4e-05 Score=68.09 Aligned_cols=60 Identities=20% Similarity=0.284 Sum_probs=46.1
Q ss_pred CceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 336 KGVRIRRIEPTAPESH--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
.|++|..|.++|||++ ||++||+|++|||++|.+..... +..++.. .++.+.|+|.|...
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKE--------AVTILSQ--QRGEIEFEVVYVAL 96 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHH--------HHHHHHH--CCSEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCcEEEEEEecCC
Confidence 4899999999999997 89999999999999998753210 2333433 45689999998654
No 315
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=97.88 E-value=0.00023 Score=68.70 Aligned_cols=151 Identities=18% Similarity=0.175 Sum_probs=89.4
Q ss_pred ceEEEEEEeCCEEEEcccccCC--CCeEEEEEcC-----CCcEEEEEEEEEe------CCCCeEEEEeccCcc-cc-Ccc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH--HTQVKVKKRG-----SDTKYLATVLSIG------TECDIALLTVKDDEF-WE-GVS 214 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~--~~~i~V~~~~-----dg~~~~a~vv~~d------~~~DlAlLkv~~~~~-~~-~l~ 214 (568)
..++|.+|++.+|||+||++.+ ...+.|.+.. .+..+..+-+..+ ...|||||+++.... .. .+.
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiAll~L~~~v~~~~~~v~ 103 (235)
T 3h7t_A 24 PFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKTTK 103 (235)
T ss_dssp CCEEEEESSSSEEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTCCEEEEESSCCCCCSSSCC
T ss_pred ceEeEEEeeCCEEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCCeEEEEeccccccCCcccc
Confidence 4699999999999999999964 3467777621 1233444333332 236999999986542 22 466
Q ss_pred ceecCCC---cccCCeEEEEecCCCCC--------CceEEEEEEeeeec------------c------------c----c
Q 036586 215 PVEFGDL---PALQDAVTVVGYPIGGD--------TISVTSGVVSRMEI------------L------------S----Y 255 (568)
Q Consensus 215 ~~~l~~~---~~~g~~V~aiG~P~g~~--------~~svt~GiIs~~~~------------~------------~----~ 255 (568)
|+.|... ...++.+++.|+..... ...+..-+++.-.. . . .
T Consensus 104 pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 183 (235)
T 3h7t_A 104 KIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGY 183 (235)
T ss_dssp CCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBCCT
T ss_pred ceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCcccc
Confidence 7777653 35578999999854211 11223333332100 0 0 0
Q ss_pred cCCCceeecccceEEEEEeeeecCCCCccccccccchhhhHhHHHhh
Q 036586 256 VHGSTELLGLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYE 302 (568)
Q Consensus 256 ~~ggspL~n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 302 (568)
.++||||+. +|+++||++.+..- +....+....+.....++++..
T Consensus 184 GDsGgPl~~-~~~l~Gi~S~g~~C-~~~~p~vyt~v~~~~~WI~~~i 228 (235)
T 3h7t_A 184 GDAGDPAVQ-NGTLVGVASYISSM-PSEFPSVFLRVGYYVLDIKDII 228 (235)
T ss_dssp TCTTCEEEE-TTEEEEEECCCTTC-CTTSCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCceee-CCeEEEEEEecCCC-CCCCCceEEEHHHHHHHHHHHH
Confidence 146779997 78999999875321 1122333455555666666654
No 316
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=97.88 E-value=2.5e-05 Score=64.99 Aligned_cols=59 Identities=7% Similarity=0.196 Sum_probs=50.3
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
..+++|..|.+++++...+ ++.||+|++|||++|.+ +.++..+++... +.+.|++.|++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~g 93 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS-DMVYLKVAKPG 93 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC-SEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEcCC
Confidence 3569999999998887777 77999999999999988 578888888764 58999999976
No 317
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=97.88 E-value=0.00023 Score=69.16 Aligned_cols=86 Identities=17% Similarity=0.216 Sum_probs=61.5
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcCC--------CcEEEEEEEEEeC---------CCCeEEEEeccCc-ccc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGS--------DTKYLATVLSIGT---------ECDIALLTVKDDE-FWE 211 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~d--------g~~~~a~vv~~d~---------~~DlAlLkv~~~~-~~~ 211 (568)
...+|.+|++.+|||+||++.+...+.|.+... ...+..+-+..++ ..|||||+++... +..
T Consensus 28 ~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~~~~~~ 107 (236)
T 1elt_A 28 HTCGGSLIRQGWVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNS 107 (236)
T ss_dssp EEEEEEEEETTEEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCSS
T ss_pred eEEEEEEEeCCEEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEECCCCCccCC
Confidence 469999999999999999998877888887311 2334444444554 5699999998653 223
Q ss_pred CccceecCCCc---ccCCeEEEEecCC
Q 036586 212 GVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 212 ~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.+.|+.|.... ..++.+.++|+..
T Consensus 108 ~v~picL~~~~~~~~~~~~~~v~GwG~ 134 (236)
T 1elt_A 108 AVQLAALPPSNQILPNNNPCYITGWGK 134 (236)
T ss_dssp SCCCCCCCCTTCCCCTTCCEEEEESCC
T ss_pred cEEeccCCCccccCCCCCEEEEEeCCC
Confidence 56777776533 3468899999864
No 318
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=97.88 E-value=0.00029 Score=68.95 Aligned_cols=86 Identities=19% Similarity=0.191 Sum_probs=59.0
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcCC--------CcEEEEEEEEEeC--------CCCeEEEEeccC---
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRGS--------DTKYLATVLSIGT--------ECDIALLTVKDD--- 207 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~d--------g~~~~a~vv~~d~--------~~DlAlLkv~~~--- 207 (568)
..++|.+|++.+|||+||++.+. ..+.|.+... ...+..+-+..++ ..|||||+++..
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiALl~L~~~~~~ 102 (248)
T 2r0l_A 23 SFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR 102 (248)
T ss_dssp EEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCSSSC
T ss_pred ceEEEEEEcCCEEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcCCCCCCCEEEEEeCCcccc
Confidence 46999999999999999999764 4677776211 2334443333333 359999999865
Q ss_pred --ccccCccceecCCCc---ccCCeEEEEecCC
Q 036586 208 --EFWEGVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 208 --~~~~~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.+...+.|+.|.... ..++.+++.|+-.
T Consensus 103 ~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~ 135 (248)
T 2r0l_A 103 CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGH 135 (248)
T ss_dssp SSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred cccCCCcEEEEECCCCCCCCCCCCEEEEEEccc
Confidence 233457777776532 3568999999753
No 319
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.88 E-value=2.7e-05 Score=66.93 Aligned_cols=60 Identities=12% Similarity=0.128 Sum_probs=49.6
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCeE
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
..+++|..|.+++++...+++.||+|++|||++|.++ .++...++. ++..+.|++.|+++
T Consensus 45 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 45 DEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG-AGTAVQMRVWRESG 106 (110)
T ss_dssp CCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEEECSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhC-CCCeEEEEEEECCc
Confidence 4579999999998887777889999999999999994 445555555 67899999999874
No 320
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=97.87 E-value=1.4e-05 Score=67.62 Aligned_cols=57 Identities=18% Similarity=0.281 Sum_probs=49.9
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcC
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
.+++|+.|.+++++...| ++.||+|++|||++|.+ |++|.++|+.. ++.+.|++.+.
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~-~~~v~L~V~~~ 95 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET-KGMISLKVIPN 95 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC-CEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 358999999998888777 78999999999999996 99999999986 56888888765
No 321
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.87 E-value=1.6e-05 Score=68.50 Aligned_cols=59 Identities=7% Similarity=0.094 Sum_probs=53.2
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccC---CCeEEEEEEcCeE
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSE---DEFLKFDLEYQQI 537 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~---~~~v~l~v~R~~~ 537 (568)
+++|..|.+++++...+ ++.||+|++|||+++.+ ++++.++|+..+ +..+.|.+.|++.
T Consensus 42 ~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 42 LVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCCC
Confidence 48999999998887777 78999999999999997 999999999988 7899999999763
No 322
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=97.87 E-value=0.0001 Score=65.68 Aligned_cols=112 Identities=9% Similarity=0.041 Sum_probs=76.7
Q ss_pred CCCEEEEEEEECCEEEEEEEEeccCCCccccccCCCCCCceeeecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhh
Q 036586 392 TGDSAVVKVLRNSEVHEFNIKLSTHKRLIPAHINGRPPSYYIIAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAM 471 (568)
Q Consensus 392 ~g~~v~l~V~R~g~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~ 471 (568)
+.+.+.....+++......+.+........-.. .. -..+||.+..-. ..
T Consensus 12 ~~~p~~~~~~~~~~~~i~~v~l~~~~~~~~i~k--~~---~~~lG~~i~gg~------~~-------------------- 60 (131)
T 1wfg_A 12 DKHPVTWQPSKDGDRLIGRILLNKRLKDGSVPR--DS---GAMLGLKVVGGK------MT-------------------- 60 (131)
T ss_dssp CCCSCEEEECSSSSEEEEEEEEECSCTTSCCCS--CS---CTTTTEEEEEEE------EC--------------------
T ss_pred CCCCCcccCCCCCCceeeEEEEeccceeEEEec--CC---CCCCCEEEecCc------cC--------------------
Confidence 345567777788887777777765522111000 00 113577654310 00
Q ss_pred hccCCcceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHcc-CCCeEEEEEEcCe
Q 036586 472 AQSVDEQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESS-EDEFLKFDLEYQQ 536 (568)
Q Consensus 472 ~~~~~~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~-~~~~v~l~v~R~~ 536 (568)
.....+++|..|.+++++...+ ++.||+|++|||++|.+ ++++.++|+.. +++.+.|++.|++
T Consensus 61 --~~~~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 127 (131)
T 1wfg_A 61 --ESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSG 127 (131)
T ss_dssp --SSSCEEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEEC
T ss_pred --CCCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCC
Confidence 0122469999999998888777 88999999999999974 69999999998 5679999999875
No 323
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=97.87 E-value=1.3e-05 Score=69.74 Aligned_cols=59 Identities=10% Similarity=0.193 Sum_probs=53.0
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC---CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ---NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~---~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...| ++.||+|++|||++|. ++.++..+++. .+..+.|.+.|++.
T Consensus 49 ~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 49 LGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK-AKDTVQLVIARGSL 111 (117)
T ss_dssp EEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH-CCSEEEEEEESSCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCEEEEEEEeCCc
Confidence 579999999998888777 7899999999999999 99999999987 57899999999874
No 324
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=97.86 E-value=0.00091 Score=65.04 Aligned_cols=86 Identities=15% Similarity=0.265 Sum_probs=58.8
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcC--------CCcEEEEEEEEEeCC---------CCeEEEEeccC--
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRG--------SDTKYLATVLSIGTE---------CDIALLTVKDD-- 207 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~--------dg~~~~a~vv~~d~~---------~DlAlLkv~~~-- 207 (568)
...+|.+|++.+|||+||++.+. ..+.|.+.. ....+..+-+..++. .|||||+++..
T Consensus 29 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~~ 108 (247)
T 3mhw_U 29 YVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEG 108 (247)
T ss_dssp EEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEEEECTTS
T ss_pred eEEEEEEEeCCEEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEEeCCccc
Confidence 56999999999999999999653 346676621 123455544445543 49999999865
Q ss_pred ---ccccCccceecCCC---cccCCeEEEEecCC
Q 036586 208 ---EFWEGVSPVEFGDL---PALQDAVTVVGYPI 235 (568)
Q Consensus 208 ---~~~~~l~~~~l~~~---~~~g~~V~aiG~P~ 235 (568)
.+...+.|+.|... ...++.+.+.|+-.
T Consensus 109 ~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~ 142 (247)
T 3mhw_U 109 RCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGK 142 (247)
T ss_dssp CCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred cccccCCcccccccCCCcCCCCCCCEEEEEecCC
Confidence 22345677777642 34578899999854
No 325
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.86 E-value=9.5e-06 Score=72.22 Aligned_cols=62 Identities=19% Similarity=0.265 Sum_probs=47.5
Q ss_pred CCceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..+++|..|.+++||++ ||++||+|++|||+.+.++..-. +..++.. ..+..+.|+|.|++.
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~-~~~~~v~l~v~r~~~ 119 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFE--------AWNIIKA-LPDGPVTIVIRRKSL 119 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHH--------HHHHHHT-SCSSEEEEEEEEESS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh-CCCceEEEEEEeCCC
Confidence 35799999999999997 79999999999999998863210 3334443 245679999998654
No 326
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=97.85 E-value=1.4e-05 Score=70.55 Aligned_cols=60 Identities=8% Similarity=0.031 Sum_probs=53.9
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...|++.||+|++|||++|.+ ++++.++|+..++..+.+.+.|++.
T Consensus 33 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g~ 94 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETD 94 (128)
T ss_dssp CSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHHHH
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeCCc
Confidence 36899999999888777788999999999999999 9999999999877788899999874
No 327
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=97.85 E-value=0.0012 Score=64.39 Aligned_cols=154 Identities=12% Similarity=0.077 Sum_probs=89.2
Q ss_pred ceEEEEEEeCCEEEEcccccCCC--CeEEEEEcC----------CCcEEEEEEEEEeC-CCCeEEEEeccCc-cccCccc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH--TQVKVKKRG----------SDTKYLATVLSIGT-ECDIALLTVKDDE-FWEGVSP 215 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~--~~i~V~~~~----------dg~~~~a~vv~~d~-~~DlAlLkv~~~~-~~~~l~~ 215 (568)
...+|.+|++.+|||+||++.+. ..+.|.+.. ....+...=+.+++ ..|||||+++... +...+.|
T Consensus 23 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~~~v~p 102 (240)
T 1si5_H 23 HICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFVST 102 (240)
T ss_dssp EEEEEEEEETTEEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCSSSCCC
T ss_pred eEEEEEEeeCCEEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccCCceec
Confidence 56999999999999999999754 467777621 12234433233454 6899999998653 2235677
Q ss_pred eecCCCc---ccCCeEEEEecCCCCC------CceEEEEEEeeeec--------------------c-c----ccCCCce
Q 036586 216 VEFGDLP---ALQDAVTVVGYPIGGD------TISVTSGVVSRMEI--------------------L-S----YVHGSTE 261 (568)
Q Consensus 216 ~~l~~~~---~~g~~V~aiG~P~g~~------~~svt~GiIs~~~~--------------------~-~----~~~ggsp 261 (568)
+.|.... ..++.+.++|+-.... ...+..-+++.-.. . . ..++|||
T Consensus 103 icLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 182 (240)
T 1si5_H 103 IDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGP 182 (240)
T ss_dssp CBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTTCE
T ss_pred cCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCCCc
Confidence 7776532 3468899999754311 11122222221100 0 0 0136779
Q ss_pred eecccc---eEEEEEeeeecCCCCccccccccchhhhHhHHHhhh
Q 036586 262 LLGLQG---KCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYEK 303 (568)
Q Consensus 262 L~n~~G---~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~~ 303 (568)
|+-..+ .++||.+.+..-......+....+...++++++...
T Consensus 183 L~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~ 227 (240)
T 1si5_H 183 LVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIIL 227 (240)
T ss_dssp EEEECSSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred EEEEECCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 986543 899998875321111223334555556666666543
No 328
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=97.85 E-value=0.00047 Score=67.54 Aligned_cols=85 Identities=20% Similarity=0.185 Sum_probs=57.2
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
...+|.+|++.+|||+||++.+. .+.|.+.. ....+..+-+..|+. .|||||+++... +...+
T Consensus 40 ~~CgGtLI~~~~VLTAAHC~~~~-~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v 118 (245)
T 1t8o_A 40 HFCGGSLINENWVVTAAHCGVTT-SDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTV 118 (245)
T ss_dssp EEEEEEEEETTEEEECGGGCCCT-TSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEeeCCEEEEcHHhCcCC-CcEEEEeeeecCCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEECCCCcCCCce
Confidence 46999999999999999999763 33444410 123445444445543 599999998653 22356
Q ss_pred cceecCCCc---ccCCeEEEEecCC
Q 036586 214 SPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 214 ~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.|+.|.... ..++.+++.|+-.
T Consensus 119 ~picLp~~~~~~~~~~~~~v~GwG~ 143 (245)
T 1t8o_A 119 SAVCLPSASDDFAAGTTCVTTGWGL 143 (245)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred eeeECCCCccCCCCCCEEEEEEeCC
Confidence 777776432 3568899999753
No 329
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.85 E-value=1.9e-05 Score=69.95 Aligned_cols=60 Identities=13% Similarity=0.243 Sum_probs=53.7
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
..+++|..|.+++++...+ ++.||+|++|||++|.+ ++++.++|+. .+..+.|.+.|++.
T Consensus 45 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 45 ASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN-AGQVVHLTLVRRKT 107 (129)
T ss_dssp CCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH-CCSSEEEEEEEESS
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCc
Confidence 3579999999998887777 77999999999999999 9999999998 78899999999764
No 330
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=97.84 E-value=0.00016 Score=70.59 Aligned_cols=85 Identities=24% Similarity=0.266 Sum_probs=60.2
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
...+|.+|++.+|||+||++.....+.|.+.. ....+..+-+..|+. .|||||+++... +...+
T Consensus 25 ~~CgGtLIs~~~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v 104 (241)
T 2jkh_A 25 GFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMNV 104 (241)
T ss_dssp EEEEEEECSSSEEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTTB
T ss_pred cEEEEEEeeCCEEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCCCCCcEEEEEECCcccCCCCE
Confidence 56999999999999999999877777777721 123345555555653 599999998653 22356
Q ss_pred cceecCCCc------ccCCeEEEEecC
Q 036586 214 SPVEFGDLP------ALQDAVTVVGYP 234 (568)
Q Consensus 214 ~~~~l~~~~------~~g~~V~aiG~P 234 (568)
.|+.|.... ..++.+++.|+-
T Consensus 105 ~picLp~~~~~~~~~~~~~~~~v~GwG 131 (241)
T 2jkh_A 105 APACLPERDWAESTLMTQKTGIVSGFG 131 (241)
T ss_dssp CCCBCCCHHHHHHHTTTSSEEEEEESC
T ss_pred eeeEcCCCCcccccccCCCeEEEEecC
Confidence 777776532 246888888874
No 331
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.84 E-value=1.8e-05 Score=69.03 Aligned_cols=61 Identities=11% Similarity=0.141 Sum_probs=52.9
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeEEE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQIVV 539 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~~~ 539 (568)
.+++|+.|.+++++...+ ++.||+|++|||++|.+ +.++..+|+. .++.+.|++.|++.++
T Consensus 49 ~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~~~ 112 (117)
T 1ujd_A 49 IGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQ-QSGEAEICVRLDLNMS 112 (117)
T ss_dssp EEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSC-CSSCEEEEEESSCCCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc-CCCEEEEEEEECCccc
Confidence 468999999998887777 78999999999999976 7999999987 5678999999988654
No 332
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=97.84 E-value=2.7e-05 Score=65.28 Aligned_cols=59 Identities=12% Similarity=0.224 Sum_probs=51.2
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|. +++++.++++ ..++.+.|.+.|++.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~-~~g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ-MAGETVTLKIKKQTD 91 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH-TCCSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEeCCC
Confidence 358899999998887777 7899999999999997 4799999998 467899999999875
No 333
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.83 E-value=2.4e-05 Score=66.56 Aligned_cols=57 Identities=14% Similarity=0.148 Sum_probs=50.8
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+++.||+|++|||++|.+ ++++.++|+. ++.+.|++.|+.
T Consensus 41 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~v~l~v~r~~ 99 (104)
T 1wi2_A 41 LGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT--AREISMRVRFFS 99 (104)
T ss_dssp CCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH--SSSEEEEEECCC
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCEEEEEEEECC
Confidence 45899999999887777788999999999999999 9999999998 678999999875
No 334
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.83 E-value=2.5e-05 Score=66.16 Aligned_cols=58 Identities=14% Similarity=0.150 Sum_probs=50.8
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+++.||+|++|||++|.+ ++++.++++.. +..+.|++.|++
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~ 89 (102)
T 2d90_A 30 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKG-GDQTTLLVLDKE 89 (102)
T ss_dssp SSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHHS-TTEEEEEECSTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEECC
Confidence 46899999999988888888999999999999998 58999999874 678999998754
No 335
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=97.83 E-value=1.2e-05 Score=69.61 Aligned_cols=58 Identities=12% Similarity=0.068 Sum_probs=51.8
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...|++.||+|++|||++|.+ ++++.++++.. +..+.|++.|++
T Consensus 38 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~ 97 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKS-GNSVTLLVLDGD 97 (114)
T ss_dssp CSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHT-CSEEEEEEECHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEECC
Confidence 46899999999988888888999999999999988 49999999875 789999999976
No 336
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=97.82 E-value=0.00051 Score=66.81 Aligned_cols=85 Identities=16% Similarity=0.243 Sum_probs=59.5
Q ss_pred eEEEEEEeCCEEEEcccccCCC-----CeEEEEEcC------CC--cEEEEEEEEEeCC-------CCeEEEEeccCc-c
Q 036586 151 SSSGFIVGGRRVLTNAHSVEHH-----TQVKVKKRG------SD--TKYLATVLSIGTE-------CDIALLTVKDDE-F 209 (568)
Q Consensus 151 ~GSGfiI~~G~ILTn~HVV~~~-----~~i~V~~~~------dg--~~~~a~vv~~d~~-------~DlAlLkv~~~~-~ 209 (568)
..+|.+|++.+|||+||++.+. ..+.|.+-. ++ ..+..+=+..||. .|||||+++... +
T Consensus 29 ~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~ 108 (237)
T 2f91_A 29 FCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLTF 108 (237)
T ss_dssp EEEEEEEETTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCC
T ss_pred eEEEEEeeCCEEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCCccc
Confidence 3899999999999999999753 457777621 11 3455544455653 599999998653 2
Q ss_pred ccCccceecCCCc-ccCCeEEEEecCC
Q 036586 210 WEGVSPVEFGDLP-ALQDAVTVVGYPI 235 (568)
Q Consensus 210 ~~~l~~~~l~~~~-~~g~~V~aiG~P~ 235 (568)
...+.|+.|.... ..++.+++.|+-.
T Consensus 109 ~~~v~picLp~~~~~~~~~~~v~GwG~ 135 (237)
T 2f91_A 109 NDNVAPIALPEQGHTATGDVIVTGWGT 135 (237)
T ss_dssp BTTBCCCBCCCTTCCCCSEEEEEESCC
T ss_pred CCceeeccCCCCCCCCCCcEEEEECCc
Confidence 2356778786543 5678899999753
No 337
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=97.82 E-value=3.2e-05 Score=64.29 Aligned_cols=58 Identities=14% Similarity=0.249 Sum_probs=50.2
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEec--CCHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPV--QNLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV--~~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
+++|..|.+++++...+ ++.||+|++|||++| .+++++.++|+...+ .+.|++.|..+
T Consensus 29 ~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~~~~ 89 (93)
T 3o46_A 29 AIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQG-AITFKIIPGSK 89 (93)
T ss_dssp CEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCE-EEEEEEECC--
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-eEEEEEEeCCC
Confidence 48999999998887777 779999999999999 899999999998775 89999987643
No 338
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=97.82 E-value=3e-05 Score=65.58 Aligned_cols=60 Identities=12% Similarity=0.122 Sum_probs=52.0
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
..+++|..|.+++++...+ ++.||+|++|||++|.+ +.++..+++. .+..+.|.+.|++.
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~~ 95 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE-AGPVVRLVVRRRQP 95 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 3569999999998887777 77999999999999977 8889999987 46899999999764
No 339
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=97.82 E-value=2.8e-05 Score=64.41 Aligned_cols=58 Identities=21% Similarity=0.042 Sum_probs=48.7
Q ss_pred EEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 480 VVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 480 vvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
++|..|.+++++...|++.||+|++|||++|.+ +.++.++++.. ++.+.|.+.|++..
T Consensus 26 ~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~~~ 85 (91)
T 2f5y_A 26 VRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC-PSEIILLVWRMVPQ 85 (91)
T ss_dssp CEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-SSEEEEEEEECC--
T ss_pred EEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCCC
Confidence 789999998887777788999999999999995 68999999874 45799999998754
No 340
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.82 E-value=2.2e-05 Score=68.03 Aligned_cols=58 Identities=12% Similarity=0.194 Sum_probs=52.2
Q ss_pred EEEEEEeccccccc-cccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 480 VVVSQVLVADINIG-YEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 480 vvvs~V~~~~~~~g-~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
++|..|.+++++.. .+++.||+|++|||++|.+ ++++.++|+. .+..+.|++.|+++.
T Consensus 45 ~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 45 HKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD-AGLSVTLRIIPQEEL 105 (114)
T ss_dssp CEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH-TTTEEEEEECCCSCC
T ss_pred eEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCcC
Confidence 68999999988877 7888999999999999999 6999999998 778999999998753
No 341
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=97.82 E-value=4.2e-05 Score=66.05 Aligned_cols=60 Identities=10% Similarity=0.132 Sum_probs=51.2
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
.+++|..|.+++++...| ++.||+|++|||++|.+ +.++..+++. .+..+.|.+.|++..
T Consensus 49 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN-GGRRVRLFLKRGETS 111 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEECCEEE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCcc
Confidence 458999999998887777 78999999999999976 5788888887 467899999998864
No 342
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.82 E-value=3e-05 Score=66.53 Aligned_cols=59 Identities=7% Similarity=0.208 Sum_probs=52.2
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcC
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
..+++|..|.+++++...+ ++.||+|++|||++|.+ ++++.++|+..+++.+.|++.|.
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSG 104 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 4579999999998887777 77999999999999964 99999999998877999999885
No 343
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=97.82 E-value=0.00066 Score=65.95 Aligned_cols=86 Identities=14% Similarity=0.106 Sum_probs=58.9
Q ss_pred ceEEEEEEeCCEEEEcccccCC----CCeEEEEEcC----------CCcEEEEEEEEEeC-CCCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH----HTQVKVKKRG----------SDTKYLATVLSIGT-ECDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~----~~~i~V~~~~----------dg~~~~a~vv~~d~-~~DlAlLkv~~~~-~~~~l 213 (568)
...+|.+|++.+|||+||++.+ ...+.|.+-. ....+...-+..++ ..|||||+++... +...+
T Consensus 22 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~~~~~v 101 (234)
T 2asu_B 22 HFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQRV 101 (234)
T ss_dssp EEEEEEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCCCSSSS
T ss_pred EEEEEEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCcCCCcE
Confidence 5699999999999999999964 3456666521 12334444344555 4799999998653 22356
Q ss_pred cceecCCCc---ccCCeEEEEecCC
Q 036586 214 SPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 214 ~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.|+.|.... ..++.+.+.|+-.
T Consensus 102 ~picLp~~~~~~~~~~~~~v~GwG~ 126 (234)
T 2asu_B 102 ALICLPPEWYVVPPGTKCEIAGWGE 126 (234)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESSC
T ss_pred eccCCCCccccCCCCCEEEEEeCCc
Confidence 777776532 3468899999754
No 344
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.82 E-value=1.6e-05 Score=65.04 Aligned_cols=53 Identities=13% Similarity=0.213 Sum_probs=42.5
Q ss_pred EEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEE
Q 036586 340 IRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLR 402 (568)
Q Consensus 340 V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R 402 (568)
|..|.+++||++ ||++||+|++|||+.+.....-. +..+|. ..|.+|+|+|..
T Consensus 27 I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~e--------vv~llr--~~g~~V~L~v~p 80 (82)
T 1r6j_A 27 ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQ--------IADILS--TSGTVVTITIMP 80 (82)
T ss_dssp EEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHH--------HHHHHH--HSCSEEEEEEEE
T ss_pred EEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHH--------HHHHHh--cCCCEEEEEEEe
Confidence 788999999999 99999999999999998765311 334454 368899998864
No 345
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=97.82 E-value=1.7e-05 Score=65.42 Aligned_cols=58 Identities=5% Similarity=0.209 Sum_probs=50.5
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEec--CCHHHHHHHHHccCC-CeEEEEEEcCe
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPV--QNLKSLADMVESSED-EFLKFDLEYQQ 536 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV--~~l~~f~~~l~~~~~-~~v~l~v~R~~ 536 (568)
+++|..|.+++++...+ ++.||+|++|||++| .++.++.++++..++ ..+.|++.|.+
T Consensus 28 ~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 28 PIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEECC
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecc
Confidence 48999999998887777 789999999999999 679999999998764 48999998864
No 346
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=97.81 E-value=0.00048 Score=66.59 Aligned_cols=84 Identities=21% Similarity=0.239 Sum_probs=57.9
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
..++|.+|++.+|||+||++.+ .+.|.+.. ....+..+-+..||. .|||||+++... +...+
T Consensus 27 ~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v 104 (227)
T 1euf_A 27 HICGGFLVREDFVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDKV 104 (227)
T ss_dssp EEEEEEEEETTEEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSSC
T ss_pred eEEEEEEeeCCEEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEECCcCcCCCce
Confidence 5699999999999999999975 46666521 123445444445554 599999998653 22356
Q ss_pred cceecCCCc---ccCCeEEEEecCC
Q 036586 214 SPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 214 ~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.|+.|.... ..++.+.+.|+-.
T Consensus 105 ~picLp~~~~~~~~~~~~~v~GwG~ 129 (227)
T 1euf_A 105 SPINLPRSLAEVKPGMMCSVAGWGR 129 (227)
T ss_dssp CCCCCCCTTCCCCTTCEEEEEESCB
T ss_pred eccCCCCccccCCCCCEEEEEEEcc
Confidence 777776532 3568899999753
No 347
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.81 E-value=1.2e-05 Score=85.11 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=48.1
Q ss_pred ceEEEEecCCCcccC-CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCEE
Q 036586 337 GVRIRRIEPTAPESH-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSEV 406 (568)
Q Consensus 337 Gv~V~~V~p~spA~~-GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~~ 406 (568)
.++|..|.++|||++ ||++||+|++|||++|.++. + ..++.. .|.+++|+|.|+|+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~----------~~~l~~--~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-E----------SELLQG--STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-G----------GGGTSC--SCEEEEEEEEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-H----------HHHhhC--CCCEEEEEEEeCCcc
Confidence 478999999999999 99999999999999999874 2 344544 789999999998764
No 348
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=97.81 E-value=0.00055 Score=66.41 Aligned_cols=85 Identities=16% Similarity=0.124 Sum_probs=57.8
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
...+|.+|++.+|||+||++.+ ..+.|.+.. ....+..+-+..||. .|||||+++... +...+
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v 102 (234)
T 1orf_A 24 TICAGALIAKDWVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKYV 102 (234)
T ss_dssp CEEEEEEEETTEEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEESSCCCCSSSS
T ss_pred eEEEEEEeeCCEEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEECCcCccCCCe
Confidence 5699999999999999999975 344555521 123444444445543 599999998653 22356
Q ss_pred cceecCCCc---ccCCeEEEEecCC
Q 036586 214 SPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 214 ~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.|+.|.... ..++.+.+.|+-.
T Consensus 103 ~picLp~~~~~~~~~~~~~v~GwG~ 127 (234)
T 1orf_A 103 TILHLPKKGDDVKPGTMCQVAGWGR 127 (234)
T ss_dssp CCCCCCSSCCCCCTTCEEEEEESSC
T ss_pred eeeecCCCcCCCCCCCEEEEEECCc
Confidence 777776533 3568899999753
No 349
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=97.81 E-value=1.6e-05 Score=66.29 Aligned_cols=60 Identities=18% Similarity=0.184 Sum_probs=47.8
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
+++|..|.+++++...|++.||+|++|||++|.++ +++.++|+...+....+.+.+++..
T Consensus 30 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~r~~~~~ 91 (95)
T 3r68_A 30 GQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKELER 91 (95)
T ss_dssp SEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEECC---
T ss_pred CEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEECCcccc
Confidence 58999999998888778889999999999999999 9999999986555555555555543
No 350
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.81 E-value=2e-05 Score=66.95 Aligned_cols=59 Identities=15% Similarity=0.113 Sum_probs=51.0
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.+ +.++..+++. .+..+.|++.|+++
T Consensus 38 ~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g~ 99 (104)
T 2djt_A 38 TPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA-GGPQLHLVIRRPLS 99 (104)
T ss_dssp CCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH-TCSEEEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECCC
Confidence 358899999998887777 77999999999999988 6888888887 57899999999875
No 351
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=97.80 E-value=2.7e-05 Score=66.54 Aligned_cols=61 Identities=18% Similarity=0.150 Sum_probs=50.8
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHc-cCCCeEEEEEEcCeEE
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVES-SEDEFLKFDLEYQQIV 538 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~-~~~~~v~l~v~R~~~~ 538 (568)
..+++|..|.+++++. .+++.||+|++|||++|.++.++..++.. ..+..+.|++.|++..
T Consensus 38 ~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEESCC
T ss_pred CCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEECCCC
Confidence 3569999999988877 78889999999999999999888776554 3567899999997753
No 352
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=97.80 E-value=2.3e-05 Score=66.17 Aligned_cols=59 Identities=14% Similarity=0.169 Sum_probs=50.3
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.++ .++..+++.. +..+.|++.|+++
T Consensus 37 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 98 (101)
T 2jik_A 37 SGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA-GYAVSLRVQHRLE 98 (101)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC-CSEEEEEEEEESC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeCCC
Confidence 569999999988877777 779999999999999874 7888888875 6789999998764
No 353
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=97.80 E-value=3.8e-05 Score=64.36 Aligned_cols=59 Identities=10% Similarity=0.189 Sum_probs=50.7
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||+++.+ +.++..+++... +.+.|++.|++.
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~ 91 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP-QRVRLTLYRDEA 91 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEECSS
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEcCCC
Confidence 358999999998887777 77999999999999987 678888888765 789999999864
No 354
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=97.80 E-value=5.2e-05 Score=63.22 Aligned_cols=58 Identities=9% Similarity=0.065 Sum_probs=49.6
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
..+++|..|.+++++.. +++.||+|++|||++|.+ +.++..+++. .+..+.|.+.|+.
T Consensus 34 ~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 34 DDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT-FQNTVELIIVREV 93 (95)
T ss_dssp CCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHH-CCSEEEEEEEEEC
T ss_pred CCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhc-CCCeEEEEEEeCC
Confidence 35799999999988888 888999999999999987 6778888874 4688999998863
No 355
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=97.79 E-value=1.1e-05 Score=68.83 Aligned_cols=58 Identities=10% Similarity=0.061 Sum_probs=50.4
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCHH--HHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLK--SLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~--~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...|++.||+|++|||++|.++. ++.++++. .+..+.|++.|++
T Consensus 26 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 85 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK-SGNSVTLLVLDGD 85 (106)
T ss_dssp CSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHH-TTTEEEEEEECHH
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCEEEEEEEECC
Confidence 4588999999988877778899999999999999886 99999984 5679999998865
No 356
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.79 E-value=2.9e-05 Score=67.20 Aligned_cols=58 Identities=17% Similarity=0.222 Sum_probs=51.3
Q ss_pred eEEEEEEecccccccccc-ccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 479 IVVVSQVLVADINIGYEE-IVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~-~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
+++|..|.+++++...++ +.||+|++|||++|. +++++.++|+... +.+.|++.|+++
T Consensus 49 gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 109 (113)
T 1va8_A 49 SVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH-GTLTFVLIPSSG 109 (113)
T ss_dssp SEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-EEEEEEEECCCC
T ss_pred CEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCc
Confidence 489999999988887777 799999999999999 7899999998766 579999999875
No 357
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=97.79 E-value=0.00068 Score=67.37 Aligned_cols=86 Identities=15% Similarity=0.247 Sum_probs=58.6
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcC--------CCcEEEEEEEEEeCC---------CCeEEEEeccC--
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRG--------SDTKYLATVLSIGTE---------CDIALLTVKDD-- 207 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~--------dg~~~~a~vv~~d~~---------~DlAlLkv~~~-- 207 (568)
...+|.+|++.+|||+||++.+. ..+.|.+.. ....+..+-+..|+. .|||||+++..
T Consensus 52 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~~ 131 (276)
T 2jde_A 52 YVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEG 131 (276)
T ss_dssp EEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTTS
T ss_pred eeeeeEEeeCCEEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEEeCCccc
Confidence 46999999999999999999753 356666621 123455544445543 49999999865
Q ss_pred ---ccccCccceecCCC---cccCCeEEEEecCC
Q 036586 208 ---EFWEGVSPVEFGDL---PALQDAVTVVGYPI 235 (568)
Q Consensus 208 ---~~~~~l~~~~l~~~---~~~g~~V~aiG~P~ 235 (568)
.+...+.|+.|... ...++.+.+.|+-.
T Consensus 132 ~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~ 165 (276)
T 2jde_A 132 RCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGK 165 (276)
T ss_dssp CCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCC
T ss_pred cccccCCceEccCCCCcccCCCCCCEEEEEECCc
Confidence 23345677777542 24578899999854
No 358
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.78 E-value=2.4e-05 Score=65.23 Aligned_cols=59 Identities=10% Similarity=0.101 Sum_probs=49.6
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|.++ .++...++. .++.+.|++.|++.
T Consensus 32 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKG-CHDHLTLSVSSGPS 92 (94)
T ss_dssp SCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHT-CCSCEEEEEECCSS
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 347899999988877777889999999999999985 777888877 56789999999864
No 359
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=97.78 E-value=3.6e-05 Score=68.27 Aligned_cols=63 Identities=6% Similarity=0.054 Sum_probs=54.3
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccC-CCeEEEEEEcCeEEEE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSE-DEFLKFDLEYQQIVVL 540 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~-~~~v~l~v~R~~~~~l 540 (568)
.+++|..|.+++++...| ++.||+|++|||++|. +++++.++|+..+ ++.+.|++.|+.....
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~ 109 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPLPF 109 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSCCSS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCCCC
Confidence 358999999998888777 7799999999999998 5789999999987 7789999999875433
No 360
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.78 E-value=5.4e-05 Score=63.55 Aligned_cols=58 Identities=16% Similarity=0.105 Sum_probs=50.0
Q ss_pred ceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEE
Q 036586 337 GVRIRRIEPTAPESH--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLR 402 (568)
Q Consensus 337 Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R 402 (568)
.++|..|.++++|+. .|++||.|++|||+.+..+.... +..+|.....|.+++|.+.+
T Consensus 29 ~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~e--------vv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 29 YAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYD--------VAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp CCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHH--------HHHHHHHSCTTCEEEEEEEE
T ss_pred cEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHH--------HHHHHHhCCCCCEEEEEEEC
Confidence 478999999999998 59999999999999999886532 56788888888999998876
No 361
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=97.78 E-value=4.4e-05 Score=65.01 Aligned_cols=60 Identities=8% Similarity=0.204 Sum_probs=51.2
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
.+++|..|.+++++...+ ++.||+|++|||+++.+ +.++...++.. +..+.|.+.|++..
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~~~ 95 (105)
T 2awx_A 33 NSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT-SDFVYLKVAKPTSM 95 (105)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC-CSEEEEEEECCCC-
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEcCCCC
Confidence 469999999998887777 77999999999999965 77888888876 68899999998753
No 362
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=97.78 E-value=0.0012 Score=64.10 Aligned_cols=140 Identities=15% Similarity=0.257 Sum_probs=86.8
Q ss_pred EEEEEEe-CCEEEEcccccCCC-CeEEEEEcCCCcEEEEE-----EEEEeCCCCeEEEEeccCccccCccceecC---CC
Q 036586 152 SSGFIVG-GRRVLTNAHSVEHH-TQVKVKKRGSDTKYLAT-----VLSIGTECDIALLTVKDDEFWEGVSPVEFG---DL 221 (568)
Q Consensus 152 GSGfiI~-~G~ILTn~HVV~~~-~~i~V~~~~dg~~~~a~-----vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~---~~ 221 (568)
.+-+=|. ..+|+||+|..... ..+.|... .|.. ... -+..-+..||.|+|.+. ++||.+-. ..
T Consensus 30 ~~l~gigyG~~iItn~HLf~rnng~L~I~s~-hG~f-~v~nt~~lki~~i~g~DiiiIrmPk-----DfpPf~~kl~FR~ 102 (241)
T 3mmg_A 30 ERLFGIGFGPYIIANQHLFRRNNGELTIKTM-HGEF-AVANSTQLQMKPVEGRDIIVIKMAK-----DFPPFPQKLKFRQ 102 (241)
T ss_dssp EEEEEEEETTEEEECGGGGSSTTCEEEEEET-TEEE-EEEEGGGSCEEECTBSSCEEEECCT-----TSCCCCSCCCBCC
T ss_pred EEEEEEeECCEEEEChhhcccCCCeEEEEEC-CceE-EccCCCceeeEEeCCccEEEEeCCC-----CCCCcchhcccCC
Confidence 4444455 78999999999855 56888883 4433 322 24455778999999965 35665543 46
Q ss_pred cccCCeEEEEecCCCCCCceEEEEEEeeee---cccc---------cCCCceeecc-cceEEEEEeeeecCCCCcccccc
Q 036586 222 PALQDAVTVVGYPIGGDTISVTSGVVSRME---ILSY---------VHGSTELLGL-QGKCVGIAFQSLKNDDVENIGYV 288 (568)
Q Consensus 222 ~~~g~~V~aiG~P~g~~~~svt~GiIs~~~---~~~~---------~~ggspL~n~-~G~VVGI~~~~~~~~~~~~~~~a 288 (568)
+..++.|.+||..+.....+.+..--|.+. ...+ .+-|+||++. +|.+|||.+.... ....+|+
T Consensus 103 P~~~E~V~lVg~~fq~k~~~s~vSesS~i~p~~~~~fWkHwIsT~~G~CGlPlVs~~Dg~IVGiHsl~~~---~~~~N~F 179 (241)
T 3mmg_A 103 PTIKDRVCMVSTNFQQKSVSSLVSESSHIVHKEDTSFWQHWITTKDGQAGSPLVSIIDGNILGIHSLTHT---TNGSNYF 179 (241)
T ss_dssp CCTTCCEEEEEEEECSSCEEEEEEEEECCEECTTSSEEEECBCCCTTCTTCEEEETTTCCEEEEEEEEET---TTCCEEE
T ss_pred CCCCCeEEEEEeecccCCccEEECCcceeEEcCCCCEEEEEcCCCCCcCCCeEEEcCCCcEEEEEecccC---CCCcEEE
Confidence 788899999998877443222111112121 1111 1246699987 8999999988653 2334565
Q ss_pred ccc--hhhhHhHHHh
Q 036586 289 IPT--PVIIHFIQDY 301 (568)
Q Consensus 289 IP~--~~i~~~l~~l 301 (568)
.|+ +.+..+|+..
T Consensus 180 ~~f~~~f~~~~L~~~ 194 (241)
T 3mmg_A 180 VEFPEKFVATYLDAA 194 (241)
T ss_dssp EECCTTHHHHHTTCS
T ss_pred EcCCHHHHHHHhhCc
Confidence 555 4444466554
No 363
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.77 E-value=2.4e-05 Score=66.68 Aligned_cols=58 Identities=17% Similarity=0.192 Sum_probs=51.3
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.+ +.++..+++.. +..+.|.+.|++
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~ 98 (105)
T 1wha_A 38 AGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA-SPTIALLLEREA 98 (105)
T ss_dssp CSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC-CSCEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECC
Confidence 468999999998887777 77999999999999988 99999999876 678999999875
No 364
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=97.77 E-value=6e-05 Score=64.21 Aligned_cols=61 Identities=11% Similarity=0.182 Sum_probs=52.5
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
..+++|..|.+++++...+ ++.||+|++|||++|. ++.++..+++. .+..+.|.+.|++..
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR-TSSVVTLEVAKQGAI 100 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEECCCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCcc
Confidence 3579999999998887777 7899999999999998 58888888877 578999999998753
No 365
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=97.77 E-value=5.1e-05 Score=64.89 Aligned_cols=59 Identities=8% Similarity=0.215 Sum_probs=50.9
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
..+++|..|.+++++...+ ++.||+|++|||++|. ++.++..+++.. ++.+.|++.|++
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 92 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNT-SDFVYLKVAKPG 92 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSC-CSEEEEEEECCS
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEEEEEEeCC
Confidence 3579999999998887777 7799999999999995 588899999875 568999999976
No 366
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.76 E-value=1.6e-05 Score=68.84 Aligned_cols=56 Identities=9% Similarity=0.020 Sum_probs=49.7
Q ss_pred EEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcC
Q 036586 480 VVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 480 vvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
++|..|.+++++...+++.||+|++|||++|. +|+++.++|+..+++.+.|++.|.
T Consensus 38 v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~~ 95 (111)
T 1vae_A 38 VQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSL 95 (111)
T ss_dssp CEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEECE
T ss_pred EEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEec
Confidence 67888988887777778899999999999999 999999999998888899988773
No 367
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.76 E-value=2.9e-05 Score=64.59 Aligned_cols=56 Identities=14% Similarity=0.276 Sum_probs=48.5
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEec-CCHHHHHHHHHccCCCeEEEEEEcC
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPV-QNLKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV-~~l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
+++|..|.+++++...+ ++.||+|++|||++| .++++|.++|+.. ++.+.|++.|.
T Consensus 30 ~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~~-~~~v~l~v~~~ 87 (91)
T 2e7k_A 30 ELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNA-SGSVILKILSG 87 (91)
T ss_dssp SEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHTC-CSSBCEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 48999999998877654 679999999999999 9999999999985 56788888874
No 368
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=97.76 E-value=0.0003 Score=68.52 Aligned_cols=86 Identities=12% Similarity=0.151 Sum_probs=61.3
Q ss_pred ceEEEEEEeCCEEEEcccccCC--CCeEEEEEcC-------CCcEEEEEEEEEeCCC---------CeEEEEeccCc-cc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH--HTQVKVKKRG-------SDTKYLATVLSIGTEC---------DIALLTVKDDE-FW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~--~~~i~V~~~~-------dg~~~~a~vv~~d~~~---------DlAlLkv~~~~-~~ 210 (568)
...+|.+|++.+|||+||++.+ ...+.|.+-. +...+..+-+..||.+ |||||+++... +.
T Consensus 27 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (241)
T 1m9u_A 27 HSCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLG 106 (241)
T ss_dssp EEEEEEECSSSEEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCSSSTTTTCCEEEEESSCCCCC
T ss_pred eeeEEEEEeCCEEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCCCCcccccEEEEEecCccccC
Confidence 5699999999999999999976 3567777621 2345566656666654 99999998653 22
Q ss_pred cCccceecCCC-c--ccCCeEEEEecCC
Q 036586 211 EGVSPVEFGDL-P--ALQDAVTVVGYPI 235 (568)
Q Consensus 211 ~~l~~~~l~~~-~--~~g~~V~aiG~P~ 235 (568)
..+.|+.|... . ..++.+++.|+-.
T Consensus 107 ~~v~picLp~~~~~~~~~~~~~v~GwG~ 134 (241)
T 1m9u_A 107 GNIQAAVLPANNNNDYAGTTCVISGWGR 134 (241)
T ss_dssp SSCCCCCCCSCSSCCCTTCEEEEEESSC
T ss_pred CCccccCcCCCcCCCCCCCEEEEEeCcc
Confidence 35677777654 2 2568999999853
No 369
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=97.76 E-value=0.00037 Score=67.57 Aligned_cols=85 Identities=24% Similarity=0.257 Sum_probs=58.6
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC---------CCeEEEEeccCc-ccc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE---------CDIALLTVKDDE-FWE 211 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~---------~DlAlLkv~~~~-~~~ 211 (568)
...+|.+|++.+|||+||++.....+.|.+.. ....+...-+..|+. .|||||+++... +..
T Consensus 24 ~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~~~~~~ 103 (235)
T 2wph_S 24 AFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNS 103 (235)
T ss_dssp TCEEEEEEETTEEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSSCCTTCCEEEEESSCCCCBT
T ss_pred eeEEEEEEeCCEEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCCcCCCCEEEEEECCcCcCCC
Confidence 56999999999999999999877777777621 123344443444432 599999998653 223
Q ss_pred CccceecCCCc-----ccCCeEEEEecC
Q 036586 212 GVSPVEFGDLP-----ALQDAVTVVGYP 234 (568)
Q Consensus 212 ~l~~~~l~~~~-----~~g~~V~aiG~P 234 (568)
.+.|+.|.... ..+..+++.|+-
T Consensus 104 ~v~picL~~~~~~~~~~~~~~~~v~GwG 131 (235)
T 2wph_S 104 YVTPICIADKEYTNIFLKFGSGYVSGWG 131 (235)
T ss_dssp TBCCCBCCCHHHHHHHHHTCEEEEEESS
T ss_pred CccccCCCCCcccccccCCccEEEEeCC
Confidence 56777776533 236788888874
No 370
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=97.76 E-value=2.5e-05 Score=65.23 Aligned_cols=60 Identities=18% Similarity=0.209 Sum_probs=50.4
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
.+++|..|.+++++...| ++.||+|++|||++|.+ +.++...++.. +..+.|.+.|++..
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQAS-GERVNLTIARPGKP 91 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-CSEEEEEEEEESCS
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEcCCcC
Confidence 359999999998887777 77999999999999976 67777777754 78999999997753
No 371
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=97.76 E-value=0.00035 Score=68.12 Aligned_cols=86 Identities=19% Similarity=0.222 Sum_probs=58.1
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~ 210 (568)
...+|.+|++.+|||+||++.+. ..+.|.+.. ....+..+-+..||. .|||||+++... +.
T Consensus 27 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~ 106 (241)
T 2any_A 27 HLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYT 106 (241)
T ss_dssp EEEEEEEEETTEEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEECTTCCTTSSSSCCEEEEESSCCCCB
T ss_pred eEEEEEEecCCEEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEECCCCCCCCCCCCeEEEEeCCcccCC
Confidence 46999999999999999999754 346665421 122334444445543 599999998653 22
Q ss_pred cCccceecCCC---cccCCeEEEEecCC
Q 036586 211 EGVSPVEFGDL---PALQDAVTVVGYPI 235 (568)
Q Consensus 211 ~~l~~~~l~~~---~~~g~~V~aiG~P~ 235 (568)
..+.|+.|... ...++.+++.|+..
T Consensus 107 ~~v~picLp~~~~~~~~~~~~~v~GwG~ 134 (241)
T 2any_A 107 EFQKPISLPSKGDTSTIYTNCWVTGWGF 134 (241)
T ss_dssp TTBCCCCCCCSSCCSTTCSEEEEEESSC
T ss_pred CCcceeEcCCcccCCCCCCeEEEEeccc
Confidence 34667777643 24568899999854
No 372
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=97.75 E-value=0.00071 Score=65.51 Aligned_cols=86 Identities=15% Similarity=0.161 Sum_probs=59.5
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcC----CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCcc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRG----SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGVS 214 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~----dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l~ 214 (568)
...+|.+|++.+|||+||++... ..+.|.+.. ++..+..+-+..++. .|||||+++... +...+.
T Consensus 24 ~~CgGtLIs~~~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~ 103 (232)
T 2oq5_A 24 HRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVH 103 (232)
T ss_dssp EEEEEEEEETTEEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCCSSSC
T ss_pred eeEEEEEEcCCEEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCCCCEEEEEecCCCccCCcee
Confidence 56999999999999999999753 356776621 234455554555543 599999998653 223567
Q ss_pred ceecCCCc---ccCCeEEEEecCC
Q 036586 215 PVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 215 ~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
|+.|.... ..++.+++.|+-.
T Consensus 104 picLp~~~~~~~~~~~~~v~GwG~ 127 (232)
T 2oq5_A 104 RVCLPDASYEFQPGDVMFVTGFGA 127 (232)
T ss_dssp CCBCCCTTCCCCTTCEEEEEESCC
T ss_pred EeECCCccccCCCCCEEEEEECCc
Confidence 77776532 3468899999753
No 373
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=97.75 E-value=3.8e-05 Score=65.86 Aligned_cols=57 Identities=11% Similarity=0.172 Sum_probs=50.0
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcC
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
.+++|..|.+++++...+++.||+|++|||++|.++ +++.++++.. ++.+.|++.|.
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~~~ 103 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQG-GNTLMVKVVMV 103 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT-TTEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEEC
Confidence 479999999998887777889999999999999999 9999999876 66788888764
No 374
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=97.75 E-value=0.00048 Score=69.02 Aligned_cols=86 Identities=19% Similarity=0.191 Sum_probs=58.7
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcCC--------CcEEEEEEEEEeC--------CCCeEEEEeccC---
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRGS--------DTKYLATVLSIGT--------ECDIALLTVKDD--- 207 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~d--------g~~~~a~vv~~d~--------~~DlAlLkv~~~--- 207 (568)
...+|.+|++.+|||+||++.+. ..+.|.+... ...+..+-+..++ ..|||||+++..
T Consensus 58 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~~~ 137 (283)
T 1yc0_A 58 SFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR 137 (283)
T ss_dssp EEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBTTB
T ss_pred cEEEEEEeeCCEEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecCccccCCCCCCceEEEEeCCCccc
Confidence 46999999999999999999764 4677776211 2234333333343 359999999865
Q ss_pred --ccccCccceecCCCc---ccCCeEEEEecCC
Q 036586 208 --EFWEGVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 208 --~~~~~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.+...+.|+.|.... ..++.+++.|+-.
T Consensus 138 ~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~ 170 (283)
T 1yc0_A 138 CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGH 170 (283)
T ss_dssp SSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSC
T ss_pred cccccCceeeeECCCCcCCCCCCCEEEEEEeCc
Confidence 233457777776532 3568899999753
No 375
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.75 E-value=1.9e-05 Score=67.03 Aligned_cols=59 Identities=12% Similarity=0.144 Sum_probs=50.5
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|.++ .++..+++.. ++.+.|++.|+++
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g~ 89 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKAC-TGSLNMTLQRASA 89 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHC-SSEEEEEECCCSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCC
Confidence 348899999988887778889999999999999987 7778888775 6789999999875
No 376
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=97.75 E-value=0.0002 Score=68.90 Aligned_cols=150 Identities=22% Similarity=0.192 Sum_probs=85.3
Q ss_pred eEEEEEEeCCEEEEcccccCC--CCeEEEEEcCC-------CcEEEEEEEEEe------CCCCeEEEEeccCcc-cc-Cc
Q 036586 151 SSSGFIVGGRRVLTNAHSVEH--HTQVKVKKRGS-------DTKYLATVLSIG------TECDIALLTVKDDEF-WE-GV 213 (568)
Q Consensus 151 ~GSGfiI~~G~ILTn~HVV~~--~~~i~V~~~~d-------g~~~~a~vv~~d------~~~DlAlLkv~~~~~-~~-~l 213 (568)
..+|.+|++.+|||+||++.+ ...+.|.+... +..+..+-+..+ ...|||||+++.+.. .. .+
T Consensus 27 ~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~v~~~~~~v 106 (228)
T 3h7o_A 27 TCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKS 106 (228)
T ss_dssp EEEEEESSSSEEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEESSCCCCCSSSS
T ss_pred EeeeEEeeCCEEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEECCccccccccc
Confidence 699999999999999999954 34566665211 112222222222 236999999986542 22 46
Q ss_pred cceecCCC---cccCCeEEEEecCCCCC-------CceEEEEEEeeeec---------c---------c----ccCCCce
Q 036586 214 SPVEFGDL---PALQDAVTVVGYPIGGD-------TISVTSGVVSRMEI---------L---------S----YVHGSTE 261 (568)
Q Consensus 214 ~~~~l~~~---~~~g~~V~aiG~P~g~~-------~~svt~GiIs~~~~---------~---------~----~~~ggsp 261 (568)
.|+.|... ...++.+.+.|+-.... ...+..-+++.-.. . . ..++|||
T Consensus 107 ~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgP 186 (228)
T 3h7o_A 107 KPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQKVGVSLESGDAGDP 186 (228)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTSCCCSSEEEEECTTCCCCGGGTTCE
T ss_pred ccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCccCCceEEecCCCCCcCCCCCCCCc
Confidence 67777653 34578999999854321 11222333331100 0 0 0136779
Q ss_pred eecccceEEEEEeeeecCCCCccccccccchhhhHhHHHhh
Q 036586 262 LLGLQGKCVGIAFQSLKNDDVENIGYVIPTPVIIHFIQDYE 302 (568)
Q Consensus 262 L~n~~G~VVGI~~~~~~~~~~~~~~~aIP~~~i~~~l~~l~ 302 (568)
|+. +++++||.+.+..- +....+...-+...++++++..
T Consensus 187 l~~-~~~l~Gi~S~g~~c-~~~~p~vyt~v~~~~~WI~~~i 225 (228)
T 3h7o_A 187 TVQ-QDTLVGVAAYFPKR-PEGAPEVFTKVGSYVSWIQDII 225 (228)
T ss_dssp EEE-TTEEEEEECCCTTC-CTTCCEEEEEGGGTHHHHHHHH
T ss_pred cee-cCeEEEEEeecCcC-CCCCCcEEEEHHHHHHHHHHHh
Confidence 997 78899999874321 1122233344455555555543
No 377
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=97.75 E-value=1.4e-05 Score=70.67 Aligned_cols=62 Identities=13% Similarity=0.101 Sum_probs=54.8
Q ss_pred ceEEEEEEecccccccccc-ccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeEEE
Q 036586 478 QIVVVSQVLVADINIGYEE-IVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQIVV 539 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~-~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~~~ 539 (568)
.+++|..|.+++++...++ +.||+|++|||+++.+ ++++.++|+..++..+.|.+.|++...
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~ 97 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGF 97 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEECCCCSE
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEeCCceE
Confidence 3588999999988877776 7999999999999999 999999999988889999999988643
No 378
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=97.74 E-value=0.00061 Score=66.00 Aligned_cols=86 Identities=20% Similarity=0.297 Sum_probs=58.7
Q ss_pred ceEEEEEEeCCEEEEcccccCC----CCeEEEEEcCC------CcEEEEEEEEEeC--------CCCeEEEEeccCc-cc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH----HTQVKVKKRGS------DTKYLATVLSIGT--------ECDIALLTVKDDE-FW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~----~~~i~V~~~~d------g~~~~a~vv~~d~--------~~DlAlLkv~~~~-~~ 210 (568)
..++|.+|++.+|||+||++.+ ...+.|.+... ...+..+-+..++ ..|||||+++... +.
T Consensus 22 ~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~v~~~ 101 (242)
T 3tvj_B 22 TTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVIN 101 (242)
T ss_dssp EEEEEEEETTTEEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCSTTCCEEEEESSCCCCB
T ss_pred CcEEEEEecCCEEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCCCCCCcCcEEEEEECCccccC
Confidence 4689999999999999999953 45566766211 1334444444554 3599999998653 23
Q ss_pred cCccceecCCCc-----ccCCeEEEEecCC
Q 036586 211 EGVSPVEFGDLP-----ALQDAVTVVGYPI 235 (568)
Q Consensus 211 ~~l~~~~l~~~~-----~~g~~V~aiG~P~ 235 (568)
..+.|+.|.... ..++.+.+.|+-.
T Consensus 102 ~~v~picLp~~~~~~~~~~~~~~~~~GwG~ 131 (242)
T 3tvj_B 102 SNITPICLPRKEAESFMRTDDIGTASGWGL 131 (242)
T ss_dssp TTBCCCBCCCTTGGGGSCTTCEEEEEESCC
T ss_pred CCEecCCcCCCcccccccCCCEEEEEEeCC
Confidence 467788886532 3568899999754
No 379
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.74 E-value=3.5e-05 Score=67.16 Aligned_cols=60 Identities=10% Similarity=0.163 Sum_probs=52.8
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEec--CCHHHHHHHHHccCCCeEEEEEEcCeEEE
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPV--QNLKSLADMVESSEDEFLKFDLEYQQIVV 539 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV--~~l~~f~~~l~~~~~~~v~l~v~R~~~~~ 539 (568)
+++|..|.+++++...+ ++.||+|++|||++| .+++++.++|++ .+..+.|++.|+++..
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~~~~ 105 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS-ISEKVRLEILPVPQSQ 105 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS-CSSEEEEEECCBTTBC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEECCCCC
Confidence 48999999998888777 779999999999999 789999999995 6789999999986543
No 380
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=97.74 E-value=4.7e-05 Score=67.47 Aligned_cols=59 Identities=20% Similarity=0.280 Sum_probs=51.7
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEec--CCHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPV--QNLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV--~~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|+.|.+++++...| ++.||+|++|||++| .+++++..+|+... ..+.|++.|+++
T Consensus 65 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 126 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIANS-RNLIITVRPANQ 126 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHTT-TSEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCc
Confidence 469999999998887777 679999999999999 88999999999764 569999999874
No 381
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=96.93 E-value=4.1e-06 Score=72.71 Aligned_cols=34 Identities=26% Similarity=0.517 Sum_probs=31.5
Q ss_pred CceEEEEecCCCcccC--CCCCCCEEEEECCEEcCC
Q 036586 336 KGVRIRRIEPTAPESH--VLKPSDIILSFDGIDIAN 369 (568)
Q Consensus 336 ~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~ 369 (568)
.|++|..|.++|||++ ||++||+|++|||++|.+
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~ 88 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRD 88 (112)
Confidence 4799999999999997 899999999999999965
No 382
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=97.73 E-value=1.7e-05 Score=64.42 Aligned_cols=56 Identities=16% Similarity=0.115 Sum_probs=48.5
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcC
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
+++|..|.+++++...+++.||+|++|||++|.++ +++.++++... +.+.|++.|+
T Consensus 24 ~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~ 81 (83)
T 2kv8_A 24 PCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKCS-GVLHMVIAEG 81 (83)
T ss_dssp SCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTCS-SCEEEEEECC
T ss_pred CeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEcC
Confidence 37888999988888778889999999999999999 89999997654 5699999886
No 383
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=97.73 E-value=0.00036 Score=70.03 Aligned_cols=86 Identities=19% Similarity=0.103 Sum_probs=61.9
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC-----CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCccce
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG-----SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGVSPV 216 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~-----dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~ 216 (568)
....|.+|++.+|||+||.+.+...+.|.+.. ....+..+-+..++. .|||||+++... +...+.|+
T Consensus 77 ~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~pi 156 (283)
T 3f1s_B 77 DFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPV 156 (283)
T ss_dssp EEEEEEEEETTEEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCTTTTCCCC
T ss_pred eeeccEEecCCEEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCCEEeE
Confidence 56999999999999999999887778887721 234455555556653 599999998653 23457778
Q ss_pred ecCCCc------ccCCeEEEEecCC
Q 036586 217 EFGDLP------ALQDAVTVVGYPI 235 (568)
Q Consensus 217 ~l~~~~------~~g~~V~aiG~P~ 235 (568)
.|.... ..++.+++.|+-.
T Consensus 157 cLp~~~~~~~~~~~~~~~~v~GwG~ 181 (283)
T 3f1s_B 157 CTPEKDFAEHLLIPRTRGLLSGWAR 181 (283)
T ss_dssp BCCCHHHHHHTTTTTSCEEEEECBC
T ss_pred ECCCCccccccccCCCEEEEEECCC
Confidence 786533 3468888888753
No 384
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.72 E-value=8.6e-06 Score=69.53 Aligned_cols=59 Identities=17% Similarity=0.192 Sum_probs=46.2
Q ss_pred ceEEEEecCCCcccC-C-CCCCCEEEEECCEEcCCC--CCCccccCccchHHHHHhcc---CCCCEEEEEEEECCE
Q 036586 337 GVRIRRIEPTAPESH-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQK---YTGDSAVVKVLRNSE 405 (568)
Q Consensus 337 Gv~V~~V~p~spA~~-G-L~~GDiIl~InG~~V~~~--~dl~~~~~~~~~l~~~l~~~---~~g~~v~l~V~R~g~ 405 (568)
+++|..|.+++||++ | |++||+|++|||+++.+. .+ +..++... ..++.+.+.|.|.++
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~----------~~~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHRE----------AARIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHH----------HHHHHHHHHHCSSCSEEEEEECCCCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHHhcccCCCCeEEEEEEEccc
Confidence 458999999999999 9 999999999999999773 33 33444432 257889999988654
No 385
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=97.72 E-value=0.00083 Score=65.97 Aligned_cols=86 Identities=21% Similarity=0.198 Sum_probs=58.8
Q ss_pred ceEEEEEEeCCEEEEcccccCC---CCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH---HTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~---~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~ 210 (568)
..++|.+|++.+|||+||++.+ ...+.|.+.. +...+..+-+..++. .|||||+++... +.
T Consensus 24 ~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~ 103 (261)
T 3gyl_B 24 HVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFS 103 (261)
T ss_dssp EEEEEEECSSSEEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEESSCCCCB
T ss_pred eEEEEEEEcCCEEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEECCCccCC
Confidence 5699999999999999999963 2456777621 122444444556664 499999998653 23
Q ss_pred cCccceecCCCc---ccCCeEEEEecCC
Q 036586 211 EGVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 211 ~~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
..+.|+.|.... ..++.+++.|+..
T Consensus 104 ~~v~picLp~~~~~~~~~~~~~v~GwG~ 131 (261)
T 3gyl_B 104 RYIRPISLPAAQASFPNGLHCTVTGWGH 131 (261)
T ss_dssp TTBCCCBCCCTTCCCCTTCEEEEEESSC
T ss_pred CceeccCCCCcccCCCCCCEEEEEecCC
Confidence 456777775432 3568899999853
No 386
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.71 E-value=3.4e-05 Score=68.44 Aligned_cols=57 Identities=7% Similarity=0.086 Sum_probs=51.4
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHcc-CCCeEEEEEEcC
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESS-EDEFLKFDLEYQ 535 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~-~~~~v~l~v~R~ 535 (568)
+++|..|.+++++...| ++.||+|++|||++|. +++++.++|+.. ++..+.|++.|+
T Consensus 50 ~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 50 YLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp EEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred cEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 37899999999888888 7899999999999995 999999999985 477999999998
No 387
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.71 E-value=9.7e-05 Score=63.08 Aligned_cols=59 Identities=8% Similarity=0.176 Sum_probs=49.5
Q ss_pred cceEEEEEEecccccccc-ccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 477 EQIVVVSQVLVADINIGY-EEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~-~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
..+++|+.|.+++++... +++.||+|++|||++|.+ +.++..+++.. ++.+.|.+.|.+
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~ 101 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKTA-KEPIVVQVLRRT 101 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHHC-CSSEEEEEEECC
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEeCC
Confidence 356899999999887777 788999999999999975 77888888874 568889988864
No 388
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=97.71 E-value=0.00062 Score=66.24 Aligned_cols=86 Identities=20% Similarity=0.285 Sum_probs=59.3
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEc--------CCCcEEEEEEEEEeCC-------CCeEEEEeccCc-cc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKR--------GSDTKYLATVLSIGTE-------CDIALLTVKDDE-FW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~--------~dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~ 210 (568)
...+|.+|++.+|||+||++.+. ..+.|.+. .+...+..+-+..||. .|||||+++... +.
T Consensus 27 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~ 106 (238)
T 3bg8_A 27 HLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYT 106 (238)
T ss_dssp EEEEEEEEETTEEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEECTTCCCGGGSCCCEEEEESSCCCCB
T ss_pred EEEEEEEeeCCEEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEECCCCCCCCCCCcEEEEEECCccccC
Confidence 56999999999999999999754 45666652 1233455554555654 699999998653 22
Q ss_pred cCccceecCCCc---ccCCeEEEEecCC
Q 036586 211 EGVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 211 ~~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
..+.|+.|.... ..++.+++.|+-.
T Consensus 107 ~~v~picLp~~~~~~~~~~~~~v~GwG~ 134 (238)
T 3bg8_A 107 DSQRPISLPSKGERNVIYTDCWVTGWGY 134 (238)
T ss_dssp TTBCCCBCCCGGGGSSCCCCEEEEESCC
T ss_pred CCcccCCCCCCccCcCCCCeEEEEecCC
Confidence 356777776532 3468889999753
No 389
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.71 E-value=3.1e-05 Score=67.51 Aligned_cols=60 Identities=12% Similarity=0.184 Sum_probs=53.2
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|. ++.++..+++..++..+.+.+.|++.
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~~~ 104 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKLT 104 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCCC
Confidence 468999999998888777 7899999999999999 69999999999988888888888764
No 390
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.70 E-value=1.9e-05 Score=68.65 Aligned_cols=61 Identities=18% Similarity=0.140 Sum_probs=51.3
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHc-cCCCeEEEEEEcCeEE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVES-SEDEFLKFDLEYQQIV 538 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~-~~~~~v~l~v~R~~~~ 538 (568)
.+++|..|.+++++...+++.||+|++|||++|.++.++..++.. ..++.+.|++.|++..
T Consensus 42 ~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~ 103 (117)
T 1uit_A 42 GGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNPHV 103 (117)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEECCCSCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCch
Confidence 469999999998877777889999999999999999888777643 4577999999998753
No 391
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=97.70 E-value=4.2e-05 Score=67.67 Aligned_cols=58 Identities=16% Similarity=0.189 Sum_probs=51.9
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC---CHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ---NLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~---~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+ ++.||+|++|||++|. +++++.++|+. .+..+.|.+.|+.
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~r~~ 115 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ-TTGSLRLIVAREP 115 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH-CCSEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCeEEEEEEcCC
Confidence 469999999998887777 7899999999999998 99999999998 5688999999975
No 392
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=97.70 E-value=0.0014 Score=64.19 Aligned_cols=86 Identities=15% Similarity=0.177 Sum_probs=60.5
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcCC---------CcEEEEEEEEEeCC-------CCeEEEEeccCc-cccC
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGS---------DTKYLATVLSIGTE-------CDIALLTVKDDE-FWEG 212 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~ 212 (568)
...+|.+|++.+|||+||++.+...+.|.+-.. ...+..+-+..||. .|||||+++... +...
T Consensus 41 ~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 120 (251)
T 1pyt_D 41 HTCGGTLITPNHVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDT 120 (251)
T ss_dssp EEEEEEEEETTEEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCSS
T ss_pred eEEEeEEecCCEEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEECCCcccCCC
Confidence 468999999999999999999877888877211 12344444555543 599999998653 2235
Q ss_pred ccceecCCCc---ccCCeEEEEecCC
Q 036586 213 VSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 213 l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
+.|+.|.... ..+..+++.|+-.
T Consensus 121 v~picLp~~~~~~~~~~~~~v~GwG~ 146 (251)
T 1pyt_D 121 IQVACLPSEGSLLPQDYPCFVTGWGR 146 (251)
T ss_dssp CCCCBCCCTTCCCCTTCEEEECBCCC
T ss_pred eeeeEcCCCcccCCCCCEEEEEeccc
Confidence 6777776432 3467888988753
No 393
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=97.70 E-value=5.8e-05 Score=62.84 Aligned_cols=56 Identities=18% Similarity=0.268 Sum_probs=46.4
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecCCHHHH--HHHHHccCCCeEEEEEEcCe
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSL--ADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f--~~~l~~~~~~~v~l~v~R~~ 536 (568)
+++|..|.+++++...+++.||+|++|||++|.++.++ .+.++ +++.+.|++.|++
T Consensus 30 g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~--~g~~v~l~v~R~~ 87 (93)
T 2dls_A 30 IVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK--SGAYVALTLLGSS 87 (93)
T ss_dssp SCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT--SSSEEEEEEECCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc--CCCEEEEEEEECC
Confidence 47899999998888888889999999999999987544 44444 4779999999975
No 394
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=97.70 E-value=6e-05 Score=62.80 Aligned_cols=59 Identities=10% Similarity=0.122 Sum_probs=50.1
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.+ +.++..+++. .+..+.|++.|++.
T Consensus 33 ~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 33 SGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH-TGQTVLLTLMRRGE 94 (97)
T ss_dssp CCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT-CCSEEEEEEEEEEE
T ss_pred CCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 468899999988877777 77999999999999996 4777888877 67899999999875
No 395
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.70 E-value=0.0001 Score=87.03 Aligned_cols=66 Identities=14% Similarity=0.188 Sum_probs=55.4
Q ss_pred CCceEEEEecCC--------CcccC-C--CCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEEC
Q 036586 335 QKGVRIRRIEPT--------APESH-V--LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRN 403 (568)
Q Consensus 335 ~~Gv~V~~V~p~--------spA~~-G--L~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~ 403 (568)
..+++|..|.++ |||++ | |+ ||+|++|||++|.++.+ +..++.. ..|+.+.|+|.|+
T Consensus 747 ~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~----------~~~~~~~-~~g~~v~l~v~r~ 814 (1045)
T 1k32_A 747 GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSN----------IYRVLSE-KAGTSARIRLSGK 814 (1045)
T ss_dssp TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBC----------HHHHHHT-TTTSEEEEEEECS
T ss_pred CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhh----------HHHhhcC-CCCCEEEEEEECC
Confidence 458999999998 99999 9 99 99999999999998876 5566655 5799999999998
Q ss_pred C-EEEEEEEE
Q 036586 404 S-EVHEFNIK 412 (568)
Q Consensus 404 g-~~~~v~v~ 412 (568)
| +.++++|+
T Consensus 815 ~~~~~~~~~~ 824 (1045)
T 1k32_A 815 GGDKRDLMID 824 (1045)
T ss_dssp SSCEEEEEEE
T ss_pred CCceEEEEEE
Confidence 7 45566665
No 396
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.69 E-value=3.1e-05 Score=66.31 Aligned_cols=59 Identities=19% Similarity=0.182 Sum_probs=52.2
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|. ++.++..+++.. +..+.|.+.|++.
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 42 GGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT-GQVVHLLLEKGQS 103 (108)
T ss_dssp CCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHT-TSEEEEEEECCCC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 468999999998887777 7799999999999999 888999999885 6899999999874
No 397
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=97.69 E-value=0.00075 Score=66.25 Aligned_cols=85 Identities=18% Similarity=0.218 Sum_probs=59.1
Q ss_pred ceEEEEEEeCCEEEEcccccCCCC---eEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHT---QVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~---~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~ 210 (568)
..++|.+|++.+|||+||++.+.. .+.|.+-. ....+..+-+..++. .|||||+++... +.
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~ 103 (254)
T 2bz6_H 24 QLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLT 103 (254)
T ss_dssp EEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEESSCCCCB
T ss_pred cEEEEEEecCCEEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCccccC
Confidence 569999999999999999998654 37777621 123455544455554 599999998653 22
Q ss_pred cCccceecCCCc------ccCCeEEEEecC
Q 036586 211 EGVSPVEFGDLP------ALQDAVTVVGYP 234 (568)
Q Consensus 211 ~~l~~~~l~~~~------~~g~~V~aiG~P 234 (568)
..+.|+.|.... ..++.+++.|+-
T Consensus 104 ~~v~picLp~~~~~~~~~~~~~~~~v~GwG 133 (254)
T 2bz6_H 104 DHVVPLCLPERTFSERTLAFVRFSLVSGWG 133 (254)
T ss_dssp TTBCCCBCCCHHHHHHTGGGCCEEEEEESC
T ss_pred CCccceECCCCccccccccCCCcEEEEeCc
Confidence 356777776532 246888899874
No 398
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.69 E-value=2.2e-05 Score=66.39 Aligned_cols=59 Identities=17% Similarity=0.093 Sum_probs=48.3
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHcc-CCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESS-EDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~-~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|.++.+. +++... .++.+.|++.|+++
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-~~~~~~~~~~~v~l~v~R~g~ 94 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHA-EAVKALKGSKKLVLSVYSAGR 94 (101)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHH-HHHHHSSSSSSCCEEECCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH-HHHHhhcCCCeEEEEEEECCc
Confidence 458999999988877777889999999999999999884 455543 35578899999875
No 399
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=97.69 E-value=7e-05 Score=71.09 Aligned_cols=63 Identities=10% Similarity=0.226 Sum_probs=55.7
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeEEEEec
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQIVVLKS 542 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~~~l~~ 542 (568)
.+++|+.|.+++++...|++.||+|++|||++|.+ ++++.++++. ++.+.|++.|++.+....
T Consensus 110 ~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~--~~~v~l~v~r~g~~p~~~ 174 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT--EKTVSIKVRHIGLIPVKS 174 (192)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS--SSEEEEEEEECCEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC--CCeEEEEEEECCccCCCc
Confidence 46899999999888877888999999999999999 9999999988 789999999999865543
No 400
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.69 E-value=7e-05 Score=65.41 Aligned_cols=60 Identities=12% Similarity=0.153 Sum_probs=51.8
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
..+++|..|.+++++...+ ++.||+|++|||++|.+ +.++..+++.. +..+.|++.|++.
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 108 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA-GYAVSLRVQHRLQ 108 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH-CSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 3569999999998887777 78999999999999998 55888888875 6789999999876
No 401
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=97.69 E-value=0.00054 Score=66.64 Aligned_cols=85 Identities=24% Similarity=0.324 Sum_probs=56.7
Q ss_pred ceEEEEEEeCCEEEEcccccCC-------CCeEEEEEcCCC--------cEEEEEEEEEeCC----------CCeEEEEe
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH-------HTQVKVKKRGSD--------TKYLATVLSIGTE----------CDIALLTV 204 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~-------~~~i~V~~~~dg--------~~~~a~vv~~d~~----------~DlAlLkv 204 (568)
..++|.+|++.+|||+||++.. ...+.|.+ +.. ..+..+-+..||. .|||||++
T Consensus 22 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~-G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L 100 (242)
T 2qy0_B 22 GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL-GHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 100 (242)
T ss_dssp SEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEE-SCSBHHHHHHHCCCCEEEEEECTTCCTTCSSCCTTCCEEEEE
T ss_pred CCEEEEEEeCCEEEEcHHhccccccccCCCceEEEEE-eeccccccccccceeEEEEEECCCCccCcCCCCCCcEEEEEE
Confidence 4689999999999999999963 23566766 222 1233343444443 49999999
Q ss_pred ccCc-cccCccceecCCCc---ccCCeEEEEecCC
Q 036586 205 KDDE-FWEGVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 205 ~~~~-~~~~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
+... +...+.|+.|.... ..+..+++.|+-.
T Consensus 101 ~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~ 135 (242)
T 2qy0_B 101 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGV 135 (242)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCC
T ss_pred CCCCcCCCCcceeecCCCccccCCCCeEEEEeecc
Confidence 8653 22356777776543 3568889999754
No 402
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.68 E-value=4.2e-05 Score=67.99 Aligned_cols=59 Identities=8% Similarity=0.139 Sum_probs=52.7
Q ss_pred ceEEEEEEecccccccc-ccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGY-EEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~-~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++... +++.||+|++|||++|.+ ++++.++|+..++..+.|.+.|++
T Consensus 57 ~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 57 KPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKS 118 (130)
T ss_dssp CCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEES
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeCC
Confidence 34889999999888877 788999999999999997 799999999998888999998864
No 403
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=97.68 E-value=7.3e-05 Score=61.65 Aligned_cols=56 Identities=14% Similarity=0.160 Sum_probs=48.9
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEec--CCHHHHHHHHHccCCCeEEEEEEcC
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPV--QNLKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV--~~l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
+++|+.|.+++++...| ++.||+|++|||+++ .+++++.++|+..+ +.+.|++.+.
T Consensus 22 gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~-~~v~L~v~~~ 80 (88)
T 3e17_A 22 QIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSR-GKLQLVVLRD 80 (88)
T ss_dssp EEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTT-TEEEEEECCC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEeCC
Confidence 58999999998887777 779999999999999 89999999999876 4788887764
No 404
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=97.67 E-value=6.1e-05 Score=63.88 Aligned_cols=55 Identities=16% Similarity=0.170 Sum_probs=48.5
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHcc--CCCeEEEEEE
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESS--EDEFLKFDLE 533 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~--~~~~v~l~v~ 533 (568)
+++|..|.+++++...|+++||+|++|||++|. +|+++.+.|+.+ +++.+.|.+.
T Consensus 40 ~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 40 AVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 578999999999888888899999999999984 999999999984 7788888764
No 405
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.67 E-value=8.7e-05 Score=76.19 Aligned_cols=61 Identities=10% Similarity=0.090 Sum_probs=54.6
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHcc-CCCeEEEEEEc-CeEE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESS-EDEFLKFDLEY-QQIV 538 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~-~~~~v~l~v~R-~~~~ 538 (568)
.+++|..|.+++++...+++.||+|++|||++|.++.+|..+|... +++.+.|++.| +|+.
T Consensus 242 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~~g~~ 304 (324)
T 1y8t_A 242 LGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGS 304 (324)
T ss_dssp SSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEECSSCCE
T ss_pred CceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCCCE
Confidence 5689999999998888888899999999999999999999999875 57799999999 8753
No 406
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=97.67 E-value=7.1e-05 Score=65.49 Aligned_cols=57 Identities=7% Similarity=0.004 Sum_probs=50.6
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcC
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
.+++|+.|.+++++...| ++.||+|++|||+++. +++++.++|+.. ++.+.|++.|.
T Consensus 53 ~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~~v~L~v~R~ 112 (118)
T 3b76_A 53 LPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT-SSSIVLKALEV 112 (118)
T ss_dssp CCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC-CSEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 468999999998887777 7899999999999999 999999999976 56799998874
No 407
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.67 E-value=3.4e-05 Score=66.88 Aligned_cols=60 Identities=12% Similarity=0.158 Sum_probs=52.1
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeEE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQIV 538 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~~ 538 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.+ +.++.++++... ..+.|++.|++..
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTP-QKVRLVVYRDEAH 105 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCC-SEEEEEEECCSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEeCCcc
Confidence 368999999988877777 77999999999999988 789999998765 7899999998754
No 408
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.66 E-value=1.1e-05 Score=71.23 Aligned_cols=59 Identities=15% Similarity=0.241 Sum_probs=52.5
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+++.||+|++|||++|. +++++.++|+.. +..+.|++.|++.
T Consensus 61 ~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNS-DTTLELSVMPKDS 121 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTC-TTEEEEECCCCCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEECCC
Confidence 5688999999888877778899999999999998 999999999975 7899999999764
No 409
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=97.66 E-value=0.00059 Score=65.98 Aligned_cols=85 Identities=13% Similarity=0.178 Sum_probs=57.9
Q ss_pred ceEEEEEEeCCEEEEcccccCCC----CeEEEEEcC---------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH----TQVKVKKRG---------SDTKYLATVLSIGTE-------CDIALLTVKDDE- 208 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~----~~i~V~~~~---------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~- 208 (568)
...+|.+|++.+|||+||++.+. ..+.|.+.. ....+..+-+..+|. .|||||+++...
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~ 103 (235)
T 4dgj_A 24 LLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKVN 103 (235)
T ss_dssp EEEEEEECSSSEEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCC
T ss_pred eEEEEEEeeCCEEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEECCCCCCCCCCCeEEEEEECCccc
Confidence 56999999999999999999542 356666521 122334444555665 599999998643
Q ss_pred cccCccceecCCCc---ccCCeEEEEecC
Q 036586 209 FWEGVSPVEFGDLP---ALQDAVTVVGYP 234 (568)
Q Consensus 209 ~~~~l~~~~l~~~~---~~g~~V~aiG~P 234 (568)
+...+.|+.|.... ..++.+.+.|+-
T Consensus 104 ~~~~v~picLp~~~~~~~~~~~~~v~GwG 132 (235)
T 4dgj_A 104 YTDYIQPISLPEENQVFPPGRNCSIAGWG 132 (235)
T ss_dssp CBTTBCCCBCCCTTCCCCTTCEEEEEESS
T ss_pred cCCcccccCCCCcccCCCCCCEEEEEecc
Confidence 23356778776533 346889999974
No 410
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=97.66 E-value=9e-05 Score=61.16 Aligned_cols=57 Identities=11% Similarity=0.033 Sum_probs=46.9
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCHH--HHHHHHHccCCCeEEEEEEcC
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLK--SLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~--~f~~~l~~~~~~~v~l~v~R~ 535 (568)
.+++|..|.+++++...+++.||+|++|||+++.++. ++...++. .++.+.|.+.|+
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAE-SGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT-STTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEeC
Confidence 4689999999988777778899999999999999964 45566664 367899999886
No 411
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.66 E-value=2.2e-05 Score=66.40 Aligned_cols=57 Identities=21% Similarity=0.059 Sum_probs=48.4
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
+++|..|.+++++...+++.||+|++|||++|. ++.++.++++...+ .+.|++.|++
T Consensus 37 ~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~-~v~l~v~R~~ 95 (100)
T 1whd_A 37 PVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCPS-EIILLVWRVS 95 (100)
T ss_dssp SCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCSS-EEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEEECC
Confidence 377889999888777778899999999999999 56999999988654 5999999874
No 412
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=97.65 E-value=0.0012 Score=64.43 Aligned_cols=86 Identities=19% Similarity=0.243 Sum_probs=59.1
Q ss_pred ceEEEEEEeCCEEEEcccccCCCC-eEEEEEcC-----CCcEEEEEEEEEe--------CCCCeEEEEeccCc-cccCcc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHT-QVKVKKRG-----SDTKYLATVLSIG--------TECDIALLTVKDDE-FWEGVS 214 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~-~i~V~~~~-----dg~~~~a~vv~~d--------~~~DlAlLkv~~~~-~~~~l~ 214 (568)
...+|.+|++.+|||+||++.+.. .+.|.+.. .+..+..+-+..+ ...|||||+++... +...+.
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~ 103 (240)
T 2zgc_A 24 HLCGGVLVHPKWVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIR 103 (240)
T ss_dssp EEEEEEEEETTEEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBSCCEEEEESSCCCCCSSCC
T ss_pred eEEEEEEEcCCEEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcccEEEEEeCCcccCCCcee
Confidence 568999999999999999997653 57777621 1234544434344 24699999998653 223567
Q ss_pred ceecCCCc---ccCCeEEEEecCC
Q 036586 215 PVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 215 ~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
|+.|.... ..++.+.+.|+..
T Consensus 104 picLp~~~~~~~~~~~~~v~GwG~ 127 (240)
T 2zgc_A 104 PLALPSKRQVVAAGTRCSMAGWGL 127 (240)
T ss_dssp CCCCCCTTCCCCTTCEEEEEECCB
T ss_pred eeEcCCCCCCCCCCCEEEEEECCc
Confidence 77776533 3568999999753
No 413
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=97.65 E-value=0.0016 Score=63.15 Aligned_cols=86 Identities=15% Similarity=0.162 Sum_probs=60.1
Q ss_pred ceEEEEEEeCCEEEEcccccCCC--CeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-ccc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH--TQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWE 211 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~--~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~ 211 (568)
..++|.+|++.+|||+||++.+. ..+.|.+-. ....+..+-+..+|. .|||||+++... +..
T Consensus 26 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 105 (238)
T 1ym0_A 26 HFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITFDI 105 (238)
T ss_dssp EEEEEEEEETTEEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCSS
T ss_pred eEEEEEEeeCCEEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeCCCccccC
Confidence 56999999999999999999764 467777621 123455554555553 599999998653 223
Q ss_pred CccceecCCCc--ccCCeEEEEecCC
Q 036586 212 GVSPVEFGDLP--ALQDAVTVVGYPI 235 (568)
Q Consensus 212 ~l~~~~l~~~~--~~g~~V~aiG~P~ 235 (568)
.+.|+.|.... ..++.+.+.|+-.
T Consensus 106 ~v~picLp~~~~~~~~~~~~~~GwG~ 131 (238)
T 1ym0_A 106 NVGPICAPDPANDYVYRKSQCSGWGT 131 (238)
T ss_dssp SCCCCBCCCTTCCCTTCEEEEEESCC
T ss_pred cccccCCCCCcCCCCCCceEEEeecC
Confidence 56777776533 2568899999754
No 414
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.64 E-value=7.7e-05 Score=61.94 Aligned_cols=54 Identities=9% Similarity=0.185 Sum_probs=47.0
Q ss_pred EEEEEeccccccccccccCcEEEeeCCEec--CCHHHHHHHHHccCCCeEEEEEEcC
Q 036586 481 VVSQVLVADINIGYEEIVNTQVLALNGKPV--QNLKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 481 vvs~V~~~~~~~g~~~~~gd~I~~VNg~pV--~~l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
+|+.|.+++++...|++.||+|++|||++| .+++++.++|+.. +..+.|++.+.
T Consensus 34 ~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~p~ 89 (90)
T 1y7n_A 34 IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNA-VGEIHMKTMPA 89 (90)
T ss_dssp EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHC-CEEEEEEEECC
T ss_pred EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 688999998887777889999999999999 5899999999965 67888888764
No 415
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=97.64 E-value=7.3e-05 Score=65.50 Aligned_cols=59 Identities=3% Similarity=0.111 Sum_probs=50.4
Q ss_pred ceEEEEEEecccccccc-ccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGY-EEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~-~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++... +++.||+|++|||++|.+ +.++..+++... +.+.|++.|++.
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~g~ 114 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNAS-GSIEMQVVAGGD 114 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHCC-SEEEEEEECCTT
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCc
Confidence 46899999999887765 777999999999999986 788999999874 569999999864
No 416
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=97.64 E-value=6.2e-05 Score=64.94 Aligned_cols=60 Identities=12% Similarity=0.116 Sum_probs=52.2
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
..+++|..|.+++++...+ ++.||+|++|||+++.+ +.++..+++.. +..+.|.+.|++.
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 96 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT-KGRVRFMIGRERP 96 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS-CSSCEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CCeEEEEEEeCCC
Confidence 3579999999999887777 78999999999999985 78888888886 6789999999874
No 417
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=97.64 E-value=0.0015 Score=63.90 Aligned_cols=86 Identities=22% Similarity=0.227 Sum_probs=57.7
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcCC--------CcEEEEEEEEEeC-CCCeEEEEeccCc-cccCccce
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRGS--------DTKYLATVLSIGT-ECDIALLTVKDDE-FWEGVSPV 216 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~d--------g~~~~a~vv~~d~-~~DlAlLkv~~~~-~~~~l~~~ 216 (568)
...+|.+|++.+|||+||++.+. ..+.|.+... ...+...-+..++ ..|||||+++... +...+.|+
T Consensus 42 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~~~v~pi 121 (247)
T 1ddj_A 42 HFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIPA 121 (247)
T ss_dssp EEEEEEEEETTEEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCCSSCCCC
T ss_pred eEEEEEEeeCCEEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeCCCEEee
Confidence 46899999999999999999754 3566665211 1233433344454 4799999998653 22356677
Q ss_pred ecCCCc---ccCCeEEEEecCC
Q 036586 217 EFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 217 ~l~~~~---~~g~~V~aiG~P~ 235 (568)
.|.... ..++.+++.|+-.
T Consensus 122 cLp~~~~~~~~~~~~~v~GwG~ 143 (247)
T 1ddj_A 122 CLPSPNYVVADRTECFITGWGE 143 (247)
T ss_dssp BCCCTTCCCCTTCEEEEEECCC
T ss_pred ecCCcccCCCCCCEEEEEEccc
Confidence 776432 3458888988754
No 418
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=97.62 E-value=9.2e-05 Score=63.11 Aligned_cols=57 Identities=19% Similarity=0.213 Sum_probs=49.9
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
+++|..|.+++++...+++.||+|++|||++|. +++++.++++. .++.+.|++.|.+
T Consensus 44 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRA-GEKELILTVLSVE 102 (107)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH-CSSEEEEEEECSS
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcCC
Confidence 357999999988877778899999999999999 88999999996 4788999998864
No 419
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=97.62 E-value=7.5e-05 Score=63.28 Aligned_cols=58 Identities=9% Similarity=0.065 Sum_probs=49.9
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
..+++|..|.+++++.. +++.||+|++|||++|.+ +.++..+++. .+..+.|.+.|+.
T Consensus 42 ~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 42 DDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT-FQNTVELIIVREV 101 (103)
T ss_dssp CCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHHH-CCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhhc-CCCeEEEEEEecC
Confidence 35699999999988888 888999999999999977 7788888874 4678999999874
No 420
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=97.62 E-value=7e-05 Score=61.97 Aligned_cols=59 Identities=20% Similarity=0.253 Sum_probs=49.3
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...| ++.||+|++|||+++.+ ++++..+++.. ++.+.|++.|.+.
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 29 TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKCS-LGTVTLEVGRIST 90 (92)
T ss_dssp CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-CSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEcccc
Confidence 458999999998887777 77999999999999976 57788888764 5679999998763
No 421
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.61 E-value=9.1e-05 Score=63.52 Aligned_cols=59 Identities=10% Similarity=0.201 Sum_probs=51.1
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|. ++.++..+++.. +..+.|.+.|++.
T Consensus 36 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~~ 97 (110)
T 1um1_A 36 PGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG-GKKMRFLVAKSDV 97 (110)
T ss_dssp SSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC-CSEEEEEEECCCH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 469999999998887777 7899999999999997 588888888875 6889999999863
No 422
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.61 E-value=8.4e-05 Score=61.54 Aligned_cols=58 Identities=14% Similarity=0.212 Sum_probs=49.0
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+ ++.||+|++|||++|. ++.++.++++... +.+.|.+.|+.
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~~ 90 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ-GSVKLVVRSGP 90 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC-SEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEeCC
Confidence 458999999988877664 7799999999999999 5789999998764 57999998864
No 423
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.61 E-value=6.2e-05 Score=64.71 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=50.2
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
+++|..|.+++++...+ ++.||+|++|||++|. +++++.++++.. ++.+.|.+.|++.
T Consensus 39 g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~~ 99 (111)
T 2dlu_A 39 GVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC-GNSVRMLVARDPA 99 (111)
T ss_dssp SBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH-CSEEEEEEEESCT
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeCCC
Confidence 58999999998877777 7799999999999999 569999999875 6789999998754
No 424
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.60 E-value=1.6e-05 Score=85.49 Aligned_cols=62 Identities=23% Similarity=0.201 Sum_probs=55.0
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHcc-CCCeEEEEEEcCeEE
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESS-EDEFLKFDLEYQQIV 538 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~-~~~~v~l~v~R~~~~ 538 (568)
..+++|..|.+++++...+++.||+|++|||++|.++.+|..+|... +++.+.|++.|+++.
T Consensus 285 ~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 347 (448)
T 1ky9_A 285 QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQ 347 (448)
T ss_dssp CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEESSSCE
T ss_pred CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 36799999999988888888899999999999999999999999874 577899999998764
No 425
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=97.59 E-value=6.2e-05 Score=66.62 Aligned_cols=60 Identities=10% Similarity=0.130 Sum_probs=52.3
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHcc------CCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESS------EDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~------~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||+++.+ ++++.++|+.. ++..|.|++.|++.
T Consensus 55 ~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 468999999998887777 78999999999999987 77999999976 47799999999753
No 426
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.59 E-value=0.00013 Score=67.37 Aligned_cols=58 Identities=17% Similarity=0.132 Sum_probs=48.8
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCHHH-HH-HHHHccCCCeEEEEEEcC
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKS-LA-DMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~-f~-~~l~~~~~~~v~l~v~R~ 535 (568)
.+++|..|.+++++...+++.||+|++|||++|.+|.+ +. .+++..++..+.|++.|+
T Consensus 27 ~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~ 86 (166)
T 1w9e_A 27 NGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDR 86 (166)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcC
Confidence 35899999999888777888999999999999999988 55 555666777999999666
No 427
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=97.57 E-value=0.0001 Score=63.94 Aligned_cols=55 Identities=11% Similarity=0.160 Sum_probs=47.8
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEec--CCHHHHHHHHHccCCCeEEEEEEc
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPV--QNLKSLADMVESSEDEFLKFDLEY 534 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV--~~l~~f~~~l~~~~~~~v~l~v~R 534 (568)
+++|..|.+++++...| ++.||+|++|||++| .+++++.++|+...+ .+.|++.+
T Consensus 51 ~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~ 108 (114)
T 2gzv_A 51 CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG-EVTIHYNK 108 (114)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCCS-EEEEEEEC
T ss_pred CEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEEe
Confidence 48999999998887777 789999999999999 999999999998764 57887765
No 428
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.57 E-value=4.2e-05 Score=64.65 Aligned_cols=58 Identities=14% Similarity=0.143 Sum_probs=49.8
Q ss_pred eEEEEEEecccccccc-ccccCcEEEeeCCEecCCH-HHHHHHHHccCCCeEEEEEEcCeE
Q 036586 479 IVVVSQVLVADINIGY-EEIVNTQVLALNGKPVQNL-KSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~-~~~~gd~I~~VNg~pV~~l-~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
+++|+.|.+++++... +++.||+|++|||++|.++ .++...++.. ++.+.|++.|++.
T Consensus 36 ~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R~~~ 95 (100)
T 2edp_A 36 PLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGSRQEALILIKGS-FRILKLIVRRRNS 95 (100)
T ss_dssp EEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSCSHHHHHHHHTC-CSSCEEEEEECCC
T ss_pred CeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccchHHHHHHHHHhC-CCeEEEEEEeCCC
Confidence 4889999999888777 7889999999999999985 7788888875 5788999999875
No 429
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.56 E-value=0.0001 Score=62.92 Aligned_cols=59 Identities=14% Similarity=0.156 Sum_probs=50.8
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
..+++|..|.+++++...+ ++.||+|++|||++|. ++.++..+++.. +..+.|.+.|++
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~ 100 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT-KGNVRFVIGREK 100 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC-CSEEEEEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CCeEEEEEEeCC
Confidence 3579999999998888777 7899999999999998 478888888875 688999999864
No 430
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=97.56 E-value=0.00011 Score=61.55 Aligned_cols=56 Identities=4% Similarity=0.064 Sum_probs=45.4
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcC
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
+++|+.|.+++++...+ ++.||+|++|||++|.+ ..+...+++. .++.+.|++.|.
T Consensus 32 gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 90 (96)
T 2qkv_A 32 GCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKG-ANGKVSMEVTRP 90 (96)
T ss_dssp SEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEECC
T ss_pred cEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCcEEEEEEeC
Confidence 48999999998888777 78999999999999986 4445555554 456799999985
No 431
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=97.56 E-value=0.00013 Score=62.13 Aligned_cols=58 Identities=17% Similarity=0.102 Sum_probs=49.4
Q ss_pred ceEEEEEEeccccccccc--cccCcEEEeeCCEecCCH--HHHHHHHHccCC---CeEEEEEEcC
Q 036586 478 QIVVVSQVLVADINIGYE--EIVNTQVLALNGKPVQNL--KSLADMVESSED---EFLKFDLEYQ 535 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~--~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~---~~v~l~v~R~ 535 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.++ .++..+++...+ +.+.|++.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 358999999998887777 889999999999999955 788889988764 5899999885
No 432
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=97.55 E-value=0.00017 Score=59.40 Aligned_cols=56 Identities=11% Similarity=0.248 Sum_probs=47.3
Q ss_pred ceEEEEEEecccccccc-ccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEc
Q 036586 478 QIVVVSQVLVADINIGY-EEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEY 534 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~-~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R 534 (568)
.+++|..|.+++++... +++.||+|++|||++|.+ +.++..+++.. +..+.|.+.|
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-~~~v~l~v~r 88 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-GKEVVLEVKY 88 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEE
Confidence 45899999999888776 778999999999999985 77888888875 5678888876
No 433
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.55 E-value=0.00061 Score=69.40 Aligned_cols=85 Identities=19% Similarity=0.113 Sum_probs=61.0
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC-----CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCccce
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG-----SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGVSPV 216 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~-----dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l~~~ 216 (568)
...+|.+|++.+|||+||.+.....+.|.+.. ....+..+-+..++. .|||||+++... +...+.|+
T Consensus 118 ~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~pv~~~~~v~pi 197 (317)
T 3h5c_B 118 DFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLPV 197 (317)
T ss_dssp EEEEEEEEETTEEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCTTTSCCCC
T ss_pred eeeeeEEeeCCEEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCCCCCCCCCCeEEEEeCCcccCCCCccce
Confidence 46899999999999999999877777777721 234455555556653 599999998653 23456777
Q ss_pred ecCCCc------ccCCeEEEEecC
Q 036586 217 EFGDLP------ALQDAVTVVGYP 234 (568)
Q Consensus 217 ~l~~~~------~~g~~V~aiG~P 234 (568)
.|.... ..++.+++.|+-
T Consensus 198 cLp~~~~~~~~~~~~~~~~v~GwG 221 (317)
T 3h5c_B 198 CTPEKDFAEHLLIPRTRGLLSGWA 221 (317)
T ss_dssp BCCCHHHHHHTTTTTSCEEEEBCC
T ss_pred eCCCcccccccccCCCeEEEEecC
Confidence 776533 346889999874
No 434
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=97.55 E-value=7.6e-05 Score=63.39 Aligned_cols=54 Identities=13% Similarity=0.221 Sum_probs=47.3
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDL 532 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v 532 (568)
.+++|..|.+++++...+++.||+|++|||++|. +++++.++|+...+ .+.|++
T Consensus 48 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~-~v~l~v 103 (104)
T 2z17_A 48 MFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGN-LLTIET 103 (104)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHTTT-EEEEEC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEE
Confidence 5689999999988877778899999999999999 99999999999854 777654
No 435
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=97.54 E-value=0.0037 Score=61.07 Aligned_cols=86 Identities=21% Similarity=0.240 Sum_probs=59.0
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccC----
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDD---- 207 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~---- 207 (568)
..++|.+|++.+|||+||++.+. ..+.|.+.. ....+..+-+..|+. .|||||+++..
T Consensus 30 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~ 109 (252)
T 1rtf_B 30 FLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSRC 109 (252)
T ss_dssp EEEEEEECSSSEEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEECCSSSCC
T ss_pred EEEEEEEEeCCEEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEECCccccc
Confidence 56999999999999999999753 457777621 123455544445553 59999999865
Q ss_pred -ccccCccceecCCCc---ccCCeEEEEecCC
Q 036586 208 -EFWEGVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 208 -~~~~~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.+...+.|+.|.... ..++.+.+.|+-.
T Consensus 110 ~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~ 141 (252)
T 1rtf_B 110 AQESSVVRTVCLPPADLQLPDWTECELSGYGK 141 (252)
T ss_dssp SCCBTTBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred cccCCceeceeCCCccccCCCCCEEEEEEcCC
Confidence 223356777776432 2458888998743
No 436
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=97.53 E-value=0.00014 Score=61.46 Aligned_cols=57 Identities=14% Similarity=0.122 Sum_probs=48.2
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEec--CCHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPV--QNLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV--~~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
+++|..|.+++++...+ ++.||+|++|||++| .++.++...++. .++.+.|.+.|++
T Consensus 36 gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~~ 95 (104)
T 3i4w_A 36 GIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN-AGQTVTIIAQYKP 95 (104)
T ss_dssp CEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT-SCSEEEEEEEECH
T ss_pred CEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECc
Confidence 58999999998888777 789999999999999 456777777776 4678999998874
No 437
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.53 E-value=0.00011 Score=64.06 Aligned_cols=60 Identities=17% Similarity=0.127 Sum_probs=51.7
Q ss_pred ceEEEEEEecccccccc--ccccCcEEEeeCCEecCC--HHHHHHHHHccCC---CeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGY--EEIVNTQVLALNGKPVQN--LKSLADMVESSED---EFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~--~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~---~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++... +++.||+|++|||++|.+ +.++..+++...+ ..+.|.+.|+..
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcccc
Confidence 35899999999888877 888999999999999975 7889999988754 589999999864
No 438
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.53 E-value=4.8e-05 Score=79.07 Aligned_cols=61 Identities=11% Similarity=0.022 Sum_probs=54.3
Q ss_pred ceEEEEEEecccccccccccc-----------CcEEEeeCCEecCCHHHHHHHHHcc-CCCeEEEEEEcCeEE
Q 036586 478 QIVVVSQVLVADINIGYEEIV-----------NTQVLALNGKPVQNLKSLADMVESS-EDEFLKFDLEYQQIV 538 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~-----------gd~I~~VNg~pV~~l~~f~~~l~~~-~~~~v~l~v~R~~~~ 538 (568)
+|++|..|.+++++...|++. ||+|++|||++|.++++|..+|... +++.+.|++.|+++.
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 323 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHK 323 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECSSSE
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEECCEE
Confidence 579999999998887777777 9999999999999999999999765 477999999998754
No 439
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.53 E-value=4.9e-05 Score=64.26 Aligned_cols=59 Identities=14% Similarity=0.149 Sum_probs=50.2
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.+ +.++..+++ ..+..+.|.+.|++.
T Consensus 36 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIK-SGGRRVRLLLKRGTG 97 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHH-HHCSEECEEEECTTC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEECCC
Confidence 468999999988887777 77999999999999987 578888888 446789999999865
No 440
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.53 E-value=3.5e-05 Score=66.33 Aligned_cols=59 Identities=12% Similarity=0.043 Sum_probs=51.5
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
..+++|..|.+++++...+ ++.||+|++|||++|. ++.++..+++. .+..+.|.+.|+.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 104 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRS-VGDTLTVLVCDGF 104 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSS-CSSEEEECCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 3578999999998887777 7799999999999999 79999999987 5678999998874
No 441
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=97.53 E-value=0.00016 Score=64.40 Aligned_cols=59 Identities=10% Similarity=0.122 Sum_probs=51.2
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...|++.||+|++|||++|. +++++..+|+. .+..+.|++.|...
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ-GGNTLMVKVVMVTR 125 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHH-TTTEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEECCC
Confidence 4699999999988888888899999999999999 58899999988 56789999887643
No 442
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=97.52 E-value=0.0033 Score=62.53 Aligned_cols=86 Identities=22% Similarity=0.240 Sum_probs=57.6
Q ss_pred ceEEEEEEeCCEEEEcccccCCC------CeEEEEEcC-------------------CCcEEEEEEEEEeC---------
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH------TQVKVKKRG-------------------SDTKYLATVLSIGT--------- 195 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~------~~i~V~~~~-------------------dg~~~~a~vv~~d~--------- 195 (568)
....|.+|++.+|||+||++.+. ..+.|.+-. ....+..+-+..||
T Consensus 51 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~ 130 (278)
T 2olg_A 51 FACGGSLINNRYIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKDR 130 (278)
T ss_dssp EEEEEEECSSSEEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSSC
T ss_pred eeEEEEEEeCCEEEEhHHhCCCcccccccceeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCCCC
Confidence 46999999999999999999752 356666521 02233333333443
Q ss_pred CCCeEEEEeccCc-cccCccceecCCCc---ccCCeEEEEecCC
Q 036586 196 ECDIALLTVKDDE-FWEGVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 196 ~~DlAlLkv~~~~-~~~~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
..|||||+++... +...+.|+.|.... ..++.+++.|+-.
T Consensus 131 ~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~ 174 (278)
T 2olg_A 131 YHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGR 174 (278)
T ss_dssp TTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred CCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCc
Confidence 4699999998653 22356777776532 4578999999753
No 443
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=97.52 E-value=0.00014 Score=63.91 Aligned_cols=55 Identities=13% Similarity=0.205 Sum_probs=48.6
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEc
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEY 534 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R 534 (568)
+++|..|.+++++...| ++.||+|++|||++|. +++++..+++..++. +.|++.|
T Consensus 46 ~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~-v~l~v~r 103 (125)
T 3hpk_A 46 CLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKGE-VTIHYNK 103 (125)
T ss_dssp SEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCSE-EEEEEEE
T ss_pred CEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCe-EEEEEEE
Confidence 48999999998887777 8899999999999998 799999999987654 8888877
No 444
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.51 E-value=0.00019 Score=78.61 Aligned_cols=84 Identities=10% Similarity=0.061 Sum_probs=67.2
Q ss_pred eecEEEeeCChHHHHHHhCCCCccCchhhhHHHHHhhhhccCCcceEEEEEEeccccccccccccCcEEEeeCCEecCCH
Q 036586 434 IAGFVFTAVTAPYLRSEYGKDYEFDAPVKLLDKLLHAMAQSVDEQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL 513 (568)
Q Consensus 434 ~~Gl~~~~~~~~~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l 513 (568)
|+|+.++++..+.+++.++++ ..+|++|..|.+++++.+. ++.||+|++|||++|.+.
T Consensus 254 ~LGv~~~~~~~~~~~~~~~l~---------------------~~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~ 311 (539)
T 4fln_A 254 CLGVLLQKLENPALRECLKVP---------------------TNEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCE 311 (539)
T ss_dssp BCCEEEEECCCHHHHHHHTCS---------------------SSBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSS
T ss_pred ecceEEEecCCHHHHHhcCCC---------------------CcCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcC
Confidence 899999998657777677742 3468999999998887665 789999999999999764
Q ss_pred HH----------HHHHHHcc-CCCeEEEEEEcCeEEE
Q 036586 514 KS----------LADMVESS-EDEFLKFDLEYQQIVV 539 (568)
Q Consensus 514 ~~----------f~~~l~~~-~~~~v~l~v~R~~~~~ 539 (568)
.+ |..+|... ++..++|++.|+|+..
T Consensus 312 g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~ 348 (539)
T 4fln_A 312 GTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHK 348 (539)
T ss_dssp SEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred CeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEE
Confidence 43 67777665 5779999999998743
No 445
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=97.50 E-value=0.00033 Score=68.25 Aligned_cols=86 Identities=15% Similarity=0.173 Sum_probs=56.4
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC-CCc---------EEEEEEEEEeC-------C--CCeEEEEeccCc-c
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG-SDT---------KYLATVLSIGT-------E--CDIALLTVKDDE-F 209 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~-dg~---------~~~a~vv~~d~-------~--~DlAlLkv~~~~-~ 209 (568)
...+|.+|++.+|||+||++.+...+.|.+.. +-. .+..+=+..|| . .|||||+++... +
T Consensus 26 ~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~ 105 (240)
T 1fon_A 26 HTCGGSLIAPDWVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQL 105 (240)
T ss_dssp EEECCEEEETTEEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEEEECSSCCCC
T ss_pred eEEEEEEeeCCEEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEEEEecCcccc
Confidence 46899999999999999999887777776521 101 01111123343 2 799999998653 2
Q ss_pred ccCccceecCCCc---ccCCeEEEEecCC
Q 036586 210 WEGVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 210 ~~~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
...+.|+.|.... ..++.+++.|+-.
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~ 134 (240)
T 1fon_A 106 GDKVQLANLPPAGDILPNEAPCYISGWGR 134 (240)
T ss_dssp TTSCCCCBCCCTTCCCCTTCCCEEEECTT
T ss_pred CCcccccCCCCcccCCCCCCeEEEEEEeE
Confidence 2356777776532 3468888988753
No 446
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=97.49 E-value=0.0022 Score=64.46 Aligned_cols=86 Identities=17% Similarity=0.222 Sum_probs=57.6
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcC-------------CCcEEEEEEEEEeCC-------CCeEEEEecc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRG-------------SDTKYLATVLSIGTE-------CDIALLTVKD 206 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~-------------dg~~~~a~vv~~d~~-------~DlAlLkv~~ 206 (568)
..+.|.+|++.+|||+||++... ..+.|.+.. ....+..+-+..|+. .|||||+++.
T Consensus 30 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~nDIALl~L~~ 109 (290)
T 1fiw_A 30 HVCGGSLLNSQWLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITP 109 (290)
T ss_dssp EEEEEEEEETTEEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEEES
T ss_pred eEEEEEEeeCCEEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEEEEEEECCCCCCCCCCCCEEEEEECC
Confidence 46899999999999999999753 356666521 123344443445543 5999999986
Q ss_pred Cc-cccCccceecCCC----cccCCeEEEEecCC
Q 036586 207 DE-FWEGVSPVEFGDL----PALQDAVTVVGYPI 235 (568)
Q Consensus 207 ~~-~~~~l~~~~l~~~----~~~g~~V~aiG~P~ 235 (568)
.. +...+.|+.|... +..++.+.+.|+-.
T Consensus 110 ~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~ 143 (290)
T 1fiw_A 110 PVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGF 143 (290)
T ss_dssp CCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCC
T ss_pred ccccCCccccccCCCccccCcCCCCeEEEEEecc
Confidence 53 2235667777642 23578899999753
No 447
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=97.49 E-value=0.00075 Score=67.47 Aligned_cols=58 Identities=19% Similarity=0.145 Sum_probs=39.3
Q ss_pred ceEEEEEEeC------CEEEEcccccCCC----CeEEEEEcC---C---------C--------cE-EEEEEEEEeCCCC
Q 036586 150 SSSSGFIVGG------RRVLTNAHSVEHH----TQVKVKKRG---S---------D--------TK-YLATVLSIGTECD 198 (568)
Q Consensus 150 ~~GSGfiI~~------G~ILTn~HVV~~~----~~i~V~~~~---d---------g--------~~-~~a~vv~~d~~~D 198 (568)
..++|++|++ .||||+||++.+. ..+.|.+.. + + .. ....++......|
T Consensus 34 ~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~~~~~~~~~~~~~~~~v~~~i~h~~~~nD 113 (268)
T 1arb_A 34 LACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNTPASGANGDGSMSQTQSGSTVKATYATSD 113 (268)
T ss_dssp EEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTSGGGGSCCCCCCCCEEECEEEEEEETTTT
T ss_pred cEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCccccccccccccccCCcceEEeccceEecCCCCCc
Confidence 5699999985 6999999999752 245555521 0 0 11 2234444567789
Q ss_pred eEEEEeccC
Q 036586 199 IALLTVKDD 207 (568)
Q Consensus 199 lAlLkv~~~ 207 (568)
|||||++..
T Consensus 114 IALLrL~~~ 122 (268)
T 1arb_A 114 FTLLELNNA 122 (268)
T ss_dssp EEEEEESSC
T ss_pred eEEEEecCC
Confidence 999999865
No 448
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.49 E-value=3.6e-05 Score=76.77 Aligned_cols=61 Identities=23% Similarity=0.240 Sum_probs=48.7
Q ss_pred CCceEEEEecCCCcccC--CCCCCCEEEEECCEEcCCCCCCccccCccchHHHHHhccCCCCEEEEEEEECCE
Q 036586 335 QKGVRIRRIEPTAPESH--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAVVKVLRNSE 405 (568)
Q Consensus 335 ~~Gv~V~~V~p~spA~~--GL~~GDiIl~InG~~V~~~~dl~~~~~~~~~l~~~l~~~~~g~~v~l~V~R~g~ 405 (568)
..|++|..|.+++||++ ||++||+|++|||+.|.++.... +..++.. .|+.|.|+|.|.++
T Consensus 102 ~~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e--------~v~~l~~--~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 102 KMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDE--------AVQALKK--TGKEVVLEVKYMKE 164 (263)
T ss_dssp TEEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHH--------HHHHHHH--CCSCCCEEEECCSS
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHH--------HHHHHhc--CCCeEEEEEEeCcc
Confidence 35899999999999997 89999999999999999864311 2334443 47889999999765
No 449
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.48 E-value=7e-05 Score=62.81 Aligned_cols=56 Identities=14% Similarity=0.213 Sum_probs=47.9
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
+++|..|.+++++. .+++.||+|++|||++|.+ +.++...++. .++.+.|++.|++
T Consensus 32 ~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 89 (96)
T 2edv_A 32 PLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILRE-AEDSLSITVVRCT 89 (96)
T ss_dssp SCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHH-CSSCEEEEEEECC
T ss_pred CeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 47888999988774 7788999999999999976 7888888887 5788999999976
No 450
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=97.48 E-value=0.0053 Score=60.70 Aligned_cols=101 Identities=15% Similarity=0.231 Sum_probs=62.7
Q ss_pred ceEEEEeEeecCCCCCcccccCCCcceEEEEEEeCCEEEEcccccCCC---CeEEEEEcC--------CCcEEEEEEEEE
Q 036586 125 AVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRG--------SDTKYLATVLSI 193 (568)
Q Consensus 125 sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~--------dg~~~~a~vv~~ 193 (568)
-+|.|....... .......|.+|++.+|||+||+|.+. ..+.|.+.. .+..+..+-+..
T Consensus 37 w~v~l~~~~~~~----------~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~ 106 (276)
T 2vnt_A 37 WFAAIYRRHRGG----------SVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLIL 106 (276)
T ss_dssp TEEEEEEECSSS----------CEEEEEEEEEEETTEEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEE
T ss_pred cEEEEEEecCCC----------cceeEEEEEEeeCCEEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEEEEEE
Confidence 678886544211 11246899999999999999999753 345555421 123455555555
Q ss_pred eCC---------CCeEEEEeccCc-----cccCccceecCCC---cccCCeEEEEecCC
Q 036586 194 GTE---------CDIALLTVKDDE-----FWEGVSPVEFGDL---PALQDAVTVVGYPI 235 (568)
Q Consensus 194 d~~---------~DlAlLkv~~~~-----~~~~l~~~~l~~~---~~~g~~V~aiG~P~ 235 (568)
|+. .|||||+++... +...+.|+.|... ...+..+.+.|+-.
T Consensus 107 Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~ 165 (276)
T 2vnt_A 107 HKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGK 165 (276)
T ss_dssp CTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCC
T ss_pred ccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeec
Confidence 543 499999997432 2234566666542 24467788887644
No 451
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=97.48 E-value=0.0038 Score=60.95 Aligned_cols=86 Identities=22% Similarity=0.247 Sum_probs=56.3
Q ss_pred ceEEEEEEeCCEEEEcccccC--------CCCeEEEEEcCC---------CcEEEEEEEEEeC--------CCCeEEEEe
Q 036586 150 SSSSGFIVGGRRVLTNAHSVE--------HHTQVKVKKRGS---------DTKYLATVLSIGT--------ECDIALLTV 204 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~--------~~~~i~V~~~~d---------g~~~~a~vv~~d~--------~~DlAlLkv 204 (568)
..++|.+|++.+|||+||++. ....+.|.+... ......+-+..+| ..|||||++
T Consensus 26 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L 105 (259)
T 3rm2_H 26 LLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKL 105 (259)
T ss_dssp EEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEEEE
T ss_pred eEEEEEEEeCCEEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEEEECCCCCCCCCCCCcEEEEEe
Confidence 469999999999999999984 234566766211 1122233334444 249999999
Q ss_pred ccCc-cccCccceecCCCc------ccCCeEEEEecCC
Q 036586 205 KDDE-FWEGVSPVEFGDLP------ALQDAVTVVGYPI 235 (568)
Q Consensus 205 ~~~~-~~~~l~~~~l~~~~------~~g~~V~aiG~P~ 235 (568)
+... +...+.|+.|.... ..+..+.+.|+-.
T Consensus 106 ~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~ 143 (259)
T 3rm2_H 106 KKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGN 143 (259)
T ss_dssp SSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCC
T ss_pred CCceEcCCCcccccCCCccccccccCCCCEEEEeecCC
Confidence 8653 23456777776532 2468888998754
No 452
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.48 E-value=0.00022 Score=61.79 Aligned_cols=59 Identities=14% Similarity=0.144 Sum_probs=50.4
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
..+++|..|.+++++...+ ++.||+|++|||++|.+ +.++..+++.. ++.+.|.+.|..
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~r~~ 110 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNA-GNPVVFIVQSLS 110 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHTS-CSSEEEEECCBS
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECC
Confidence 3579999999999888888 88999999999999976 77888888874 678889888754
No 453
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=97.47 E-value=0.00027 Score=59.22 Aligned_cols=53 Identities=15% Similarity=0.183 Sum_probs=44.9
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLE 533 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~ 533 (568)
++++|..|.++++++..|++.||+|++|||++|. +|+++.+++++ ..+.+++.
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~---~~l~ltV~ 89 (94)
T 3kzd_A 35 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---PSLGLLVR 89 (94)
T ss_dssp CEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS---SEEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC---CeEEEEEE
Confidence 4699999999988888888899999999999999 57999999983 45666654
No 454
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=97.45 E-value=0.00023 Score=66.35 Aligned_cols=58 Identities=12% Similarity=0.118 Sum_probs=50.8
Q ss_pred cceEEEEEEeccccccccc-cccCcEEEeeCCEec--CCHHHHHHHHHccCCCeEEEEEEcC
Q 036586 477 EQIVVVSQVLVADINIGYE-EIVNTQVLALNGKPV--QNLKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV--~~l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
..+++|..|.+++++...| ++.||+|++|||++| .++.++.++|+. .+..+.|++.|+
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~g~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN-TKGRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH-CCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEeC
Confidence 3579999999998887777 779999999999999 678999999998 567899999885
No 455
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.45 E-value=0.00013 Score=64.01 Aligned_cols=59 Identities=7% Similarity=0.073 Sum_probs=50.0
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.+ +.++..+++... ..+.|.+.|++.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~ 112 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP-SKVKLVFIRNED 112 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC-SEEEEEEEECTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCC
Confidence 358999999998887777 77999999999999965 788888888764 589999998754
No 456
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=97.44 E-value=0.0004 Score=60.25 Aligned_cols=56 Identities=7% Similarity=-0.056 Sum_probs=45.8
Q ss_pred EEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccC-CCeEEEEEEcCeE
Q 036586 480 VVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSE-DEFLKFDLEYQQI 537 (568)
Q Consensus 480 vvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~-~~~v~l~v~R~~~ 537 (568)
.+|..+.+++. ..+++.||+|++|||++|. +++|++++|++++ +..+.|.+.|++.
T Consensus 36 ~~V~~I~~~~~--~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 36 QKVKMILDSQW--CQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGP 94 (113)
T ss_dssp EEEEEESCGGG--STTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSC
T ss_pred cEEEEecChHH--hCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCc
Confidence 56778877533 3455699999999999999 5679999999976 6799999999874
No 457
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.44 E-value=0.0001 Score=64.04 Aligned_cols=56 Identities=13% Similarity=0.127 Sum_probs=48.1
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+++.||+|++|||++|.+ |+++.++|+. ..+.|++.|..
T Consensus 44 ~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~---~~v~l~v~R~p 101 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---PSLGLLVRTYP 101 (114)
T ss_dssp EEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS---SEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC---CcEEEEEEECC
Confidence 46899999999888877888999999999999998 6789888874 47889998864
No 458
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.43 E-value=2e-05 Score=81.42 Aligned_cols=61 Identities=11% Similarity=0.138 Sum_probs=0.0
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHccCCCeEEEEEEcCeEEE
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQIVV 539 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~~~~~v~l~v~R~~~~~ 539 (568)
..|++|..|.+++++...|++.||+|++|||++|.++++|.++++. +..+.|++.|+++.+
T Consensus 253 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~--~~~v~l~v~R~g~~~ 313 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVIKR--ESTLNMVVRRGNEDI 313 (332)
T ss_dssp ---------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHHHHHhC--CCeEEEEEEECCEEE
Confidence 3578999999999888888889999999999999999999999985 678999999998743
No 459
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=97.41 E-value=0.00015 Score=62.14 Aligned_cols=56 Identities=4% Similarity=0.068 Sum_probs=45.2
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcC
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQ 535 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~ 535 (568)
+++|+.|.+++++...| ++.||+|++|||++|.+ ..+....++. .++.+.|.+.|.
T Consensus 26 gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 84 (106)
T 2la8_A 26 GCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG-ANGKVSMEVTRP 84 (106)
T ss_dssp SEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS-CBSCEEEEEEEC
T ss_pred CEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCCeEEEEEEeC
Confidence 58999999998887777 78999999999999986 4455555554 456799999885
No 460
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=97.40 E-value=0.0019 Score=67.49 Aligned_cols=86 Identities=21% Similarity=0.197 Sum_probs=58.0
Q ss_pred ceEEEEEEeCCEEEEcccccCC----CCeEEEEEcC------CCcEEEEEEEEEeCC-------------CCeEEEEecc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH----HTQVKVKKRG------SDTKYLATVLSIGTE-------------CDIALLTVKD 206 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~----~~~i~V~~~~------dg~~~~a~vv~~d~~-------------~DlAlLkv~~ 206 (568)
....|.+|++.+|||+||.+.. ...+.|.+.. .+..+..+-+..||. .|||||+++.
T Consensus 141 ~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL~~ 220 (372)
T 1z8g_A 141 HLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLSS 220 (372)
T ss_dssp EEEEEEESSSSEEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEESS
T ss_pred eEEEEEEecCCEEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEECCCccccccCCCCCCCccEEEEEECC
Confidence 4588999999999999999942 2457776621 123444444445554 4999999986
Q ss_pred Cc-cccCccceecCCCc---ccCCeEEEEecCC
Q 036586 207 DE-FWEGVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 207 ~~-~~~~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
.. +...+.|+.|.... ..++.+++.|+-.
T Consensus 221 pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~ 253 (372)
T 1z8g_A 221 PLPLTEYIQPVCLPAAGQALVDGKICTVTGWGN 253 (372)
T ss_dssp CCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSB
T ss_pred CCCCCCceeccccCCcccCCCCCCEEEEEecCC
Confidence 53 23456777776432 3468899999753
No 461
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=97.39 E-value=0.00032 Score=59.47 Aligned_cols=58 Identities=16% Similarity=0.224 Sum_probs=48.9
Q ss_pred ceEEEEEEeccccccc-cccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIG-YEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g-~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|+.|.+++++.. .+++.||+|++|||++|. +++++..+++... +.++|++.|..
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~~~ 95 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQR-GEIEFEVVYVA 95 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCC-SEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEecC
Confidence 3589999999988776 377899999999999995 4999999999876 47888888754
No 462
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.39 E-value=0.00013 Score=62.18 Aligned_cols=57 Identities=11% Similarity=0.199 Sum_probs=49.9
Q ss_pred EEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHcc----CCCeEEEEEEcCe
Q 036586 480 VVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESS----EDEFLKFDLEYQQ 536 (568)
Q Consensus 480 vvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~----~~~~v~l~v~R~~ 536 (568)
++|..|.+++++...+ ++.||+|++|||+++.+ ++++.++|+.. .++.+.|.+.|.+
T Consensus 34 ~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 34 PRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFN 97 (103)
T ss_dssp CEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCC
T ss_pred EEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEcc
Confidence 4899999998887777 77999999999999966 99999999986 6778999998865
No 463
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=97.39 E-value=0.0022 Score=62.53 Aligned_cols=86 Identities=22% Similarity=0.237 Sum_probs=58.3
Q ss_pred ceEEEEEEeCCEEEEcccccCC----CCeEEEEEcC-----CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccC
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH----HTQVKVKKRG-----SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEG 212 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~----~~~i~V~~~~-----dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~ 212 (568)
...+|.+|++.+|||+||++.. ...+.|.+.. .+..+..+-+..||. .|||||+++... +...
T Consensus 27 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 106 (245)
T 2f9n_A 27 HFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSR 106 (245)
T ss_dssp EEEEEEEEETTEEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECTTCCSSCCTTCCEEEEESSCCCCCSS
T ss_pred eEEEEEEeeCCEEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECCCccCCCCCCcEEEEEeCCCCcCCCC
Confidence 4699999999999999999953 2457776521 123344444445554 599999998653 2235
Q ss_pred ccceecCCCc---ccCCeEEEEecCC
Q 036586 213 VSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 213 l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
+.|+.|.... ..++.++++|+-.
T Consensus 107 v~picLp~~~~~~~~~~~~~v~GwG~ 132 (245)
T 2f9n_A 107 VHTVMLPPASETFPPGMPCWVTGWGD 132 (245)
T ss_dssp SCCCBCCCTTCCCCTTCCEEEEESCC
T ss_pred ccccCCCCcccCCCCCCEEEEEEeCC
Confidence 6777776432 3468899999753
No 464
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=97.39 E-value=0.00035 Score=57.04 Aligned_cols=56 Identities=16% Similarity=0.229 Sum_probs=45.7
Q ss_pred ceEEEEEEeccccccc-cccccCcEEEeeCCEec--CCHHHHHHHHHccCCCeEEEEEEc
Q 036586 478 QIVVVSQVLVADINIG-YEEIVNTQVLALNGKPV--QNLKSLADMVESSEDEFLKFDLEY 534 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g-~~~~~gd~I~~VNg~pV--~~l~~f~~~l~~~~~~~v~l~v~R 534 (568)
.+++|..|.+++++.. .+++.||+|++|||+++ .++.++..+++.. ++.+.|++.+
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ-RGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHC-CSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEE
Confidence 3589999999988776 57789999999999999 4668999999864 4567777653
No 465
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=97.37 E-value=0.0014 Score=67.26 Aligned_cols=85 Identities=25% Similarity=0.334 Sum_probs=55.7
Q ss_pred ceEEEEEEeCCEEEEcccccCC-------CCeEEEEEcCCCc--------EEEEEEEEEeC----------CCCeEEEEe
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH-------HTQVKVKKRGSDT--------KYLATVLSIGT----------ECDIALLTV 204 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~-------~~~i~V~~~~dg~--------~~~a~vv~~d~----------~~DlAlLkv 204 (568)
..+.|.+|++.+|||+||.+.. ...+.|.+ +... .+..+-+..|| ..|||||++
T Consensus 111 ~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~V~~-G~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L 189 (329)
T 1md8_A 111 GRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL-GHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 189 (329)
T ss_dssp SEEEEEEETTTEEEECGGGTSCTTC-----CCCCEEE-SCSBHHHHHHHCCCCEEEEEECSSCCSSCTTCCTTCCEEEEE
T ss_pred CCcceEEecCCEEEecCCEEEeCCcccCCCceEEEEe-ccccccccccccceeeEEEEECCCcccccCCCCCccEEEEEE
Confidence 3589999999999999999963 23455666 2221 22333333443 249999999
Q ss_pred ccCc-cccCccceecCCCc---ccCCeEEEEecCC
Q 036586 205 KDDE-FWEGVSPVEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 205 ~~~~-~~~~l~~~~l~~~~---~~g~~V~aiG~P~ 235 (568)
+... +...+.|+.|.... ..+..+++.|+-.
T Consensus 190 ~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~ 224 (329)
T 1md8_A 190 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGV 224 (329)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCB
T ss_pred CCcccCCCceEccccCCCccccCCCCEEEEEeCCC
Confidence 8653 23457778786543 3468888888743
No 466
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.36 E-value=0.00018 Score=62.47 Aligned_cols=60 Identities=17% Similarity=0.169 Sum_probs=50.0
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeEEE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQIVV 539 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~~~ 539 (568)
.+++|..|.+++++. .+++.||+|++|||++|.+ +.++..+++. .+..+.|.+.|.+...
T Consensus 46 ~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~~~ 107 (117)
T 2csj_A 46 TSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRK-SGKIAAIVVKRPRKVQ 107 (117)
T ss_dssp CBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHH-SCSEEEEEEEEEEECC
T ss_pred CCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhc-CCCeEEEEEEECCccc
Confidence 468999999987765 6677999999999999986 5778888887 4679999999977643
No 467
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=97.35 E-value=0.00044 Score=65.22 Aligned_cols=59 Identities=8% Similarity=0.067 Sum_probs=50.2
Q ss_pred cceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEc---CeE
Q 036586 477 EQIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEY---QQI 537 (568)
Q Consensus 477 ~~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R---~~~ 537 (568)
..+++|+.|.+++++.. +++.||+|++|||++|.+ ..++..+++... +.+.|.+.| ++.
T Consensus 23 ~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~~~~G~ 86 (195)
T 2qbw_A 23 DDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ-NTVELIIVREVGNGA 86 (195)
T ss_dssp CCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEEEEECSSSC
T ss_pred CCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEEcCCCCC
Confidence 45799999999998888 888999999999999987 567777887765 489999999 654
No 468
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=97.33 E-value=0.0017 Score=57.26 Aligned_cols=84 Identities=21% Similarity=0.188 Sum_probs=56.9
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cccCc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FWEGV 213 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~~~l 213 (568)
..+.|.+|++.+|||+||++.+ ..+.|.+.. ....+..+-+..++. .|||||+++... +...+
T Consensus 25 ~~CgGsLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v 103 (131)
T 1yph_C 25 HFCGGSLINENWVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTV 103 (131)
T ss_dssp EEEEEEEEETTEEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBTTB
T ss_pred EEEEEEEeeCCEEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCCCCCCEEEEEECCcccCCCcC
Confidence 4689999999999999999976 344555421 123444444445543 599999998653 22457
Q ss_pred cceecCCCc---ccCCeEEEEecC
Q 036586 214 SPVEFGDLP---ALQDAVTVVGYP 234 (568)
Q Consensus 214 ~~~~l~~~~---~~g~~V~aiG~P 234 (568)
.|+.|.... ..++.+.+.|+-
T Consensus 104 ~picLp~~~~~~~~g~~~~v~GWG 127 (131)
T 1yph_C 104 SAVCLPSASDDFAAGTTCVTTGWG 127 (131)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESC
T ss_pred cceECCCcccCCCCCCEEEEEcCC
Confidence 788886533 356888998864
No 469
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.32 E-value=0.00015 Score=61.67 Aligned_cols=58 Identities=14% Similarity=0.258 Sum_probs=48.4
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+++.||+|++|||++|. ++.++...++.. ++.+.+.+.|.+
T Consensus 32 ~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~r~~ 91 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKS-GSRVMFLLVDKE 91 (106)
T ss_dssp CSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHH-CSEEEEEECCTT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEcCc
Confidence 4588999999888777778899999999999998 468888888765 568888888764
No 470
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.30 E-value=0.00028 Score=61.49 Aligned_cols=57 Identities=19% Similarity=0.284 Sum_probs=49.8
Q ss_pred EEEEEEecccccccc-ccccCcEEEeeCCEecCC--HHHHHHHHHcc---CCCeEEEEEEcCe
Q 036586 480 VVVSQVLVADINIGY-EEIVNTQVLALNGKPVQN--LKSLADMVESS---EDEFLKFDLEYQQ 536 (568)
Q Consensus 480 vvvs~V~~~~~~~g~-~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~---~~~~v~l~v~R~~ 536 (568)
++|..|.+++++... +++.||+|++|||+++.+ ++++.++|+.. ++..++|++.|..
T Consensus 45 i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~~ 107 (118)
T 1v6b_A 45 VVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCP 107 (118)
T ss_dssp EEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECCC
T ss_pred EEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeCC
Confidence 789999999888777 778999999999999997 88999999876 3679999999853
No 471
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=97.22 E-value=0.0004 Score=60.32 Aligned_cols=58 Identities=16% Similarity=0.142 Sum_probs=46.5
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCCHHHH--HHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQNLKSL--ADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~l~~f--~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.++.++ ...++. .++.+.|.+.|++
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN-AGQTVTIIAQYKP 98 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHT-SCSEEEEEEEECH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 358999999998887777 789999999999999988543 344443 5678999998865
No 472
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.21 E-value=0.00048 Score=72.68 Aligned_cols=61 Identities=15% Similarity=0.026 Sum_probs=54.3
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHc-cCCCeEEEEEEcCeEE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVES-SEDEFLKFDLEYQQIV 538 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~-~~~~~v~l~v~R~~~~ 538 (568)
.|++|..|.+++++...|++.||+|++|||++|.+ ++++..+|+. .++..+.|++.|++..
T Consensus 31 ~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~~ 94 (391)
T 3tsz_A 31 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDV 94 (391)
T ss_dssp TEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCCcc
Confidence 56999999999988877888999999999999976 9999999998 5778999999998753
No 473
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=97.19 E-value=0.0051 Score=64.81 Aligned_cols=86 Identities=16% Similarity=0.174 Sum_probs=59.1
Q ss_pred cceEEEEEEeCCEEEEcccccCCC----CeEEEEEcCC-----------CcEEEEEEEEEeCC-------CCeEEEEecc
Q 036586 149 SSSSSGFIVGGRRVLTNAHSVEHH----TQVKVKKRGS-----------DTKYLATVLSIGTE-------CDIALLTVKD 206 (568)
Q Consensus 149 ~~~GSGfiI~~G~ILTn~HVV~~~----~~i~V~~~~d-----------g~~~~a~vv~~d~~-------~DlAlLkv~~ 206 (568)
.....|.+|++.+|||+||.+.+. ..+.|.+. . ...+..+-+..|+. .|||||+++.
T Consensus 161 ~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G-~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~ 239 (394)
T 2b9l_A 161 QLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIRAG-EWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDR 239 (394)
T ss_dssp SEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEES-CCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESS
T ss_pred ceEeeEEEEeCCEEEeccceecCCCCCcccEEEEec-eeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEEEecC
Confidence 356999999999999999999753 45777772 2 13344444455654 5999999986
Q ss_pred Cc-cccCccceecCCCc--ccCCeEEEEecCC
Q 036586 207 DE-FWEGVSPVEFGDLP--ALQDAVTVVGYPI 235 (568)
Q Consensus 207 ~~-~~~~l~~~~l~~~~--~~g~~V~aiG~P~ 235 (568)
.. +...+.|+.|.... ..+..+++.|+-.
T Consensus 240 pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~ 271 (394)
T 2b9l_A 240 PLVQADNIGTICLPQQSQIFDSTECFASGWGK 271 (394)
T ss_dssp CCBCCTTCCCCBCCCTTCCCCCSCEEEEECCT
T ss_pred ccccCCceeeeEcCCcccCccCCEEEEEeccC
Confidence 53 22456777776533 2357888888743
No 474
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=97.19 E-value=0.004 Score=65.52 Aligned_cols=86 Identities=20% Similarity=0.304 Sum_probs=59.0
Q ss_pred ceEEEEEEeCCEEEEcccccCC----CCeEEEEEcC------CCcEEEEEEEEEeC--------CCCeEEEEeccCc-cc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH----HTQVKVKKRG------SDTKYLATVLSIGT--------ECDIALLTVKDDE-FW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~----~~~i~V~~~~------dg~~~~a~vv~~d~--------~~DlAlLkv~~~~-~~ 210 (568)
....|.+|++.+|||+||.+.+ ...+.|.+-. +...+..+-+..|+ ..|||||+++... +.
T Consensus 183 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~ 262 (403)
T 1zjk_A 183 TTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVIN 262 (403)
T ss_dssp CCEEEEEETTTEEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCCCB
T ss_pred CceEEEEecCCEEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCCCCCCCCCcccEEEEEeCCcCcCC
Confidence 3588999999999999999964 4567777621 12334444444554 3699999998653 23
Q ss_pred cCccceecCCCc-----ccCCeEEEEecCC
Q 036586 211 EGVSPVEFGDLP-----ALQDAVTVVGYPI 235 (568)
Q Consensus 211 ~~l~~~~l~~~~-----~~g~~V~aiG~P~ 235 (568)
..+.|+.|.... ..++.+.+.|+-.
T Consensus 263 ~~v~picLp~~~~~~~~~~~~~~~v~GWG~ 292 (403)
T 1zjk_A 263 SNITPICLPRKEAESFMRTDDIGTASGWGL 292 (403)
T ss_dssp TTBCCCBCCCGGGGGGSSTTCEEEEEESCT
T ss_pred CceecccCCCcccccccCCCCeEEEEcCCc
Confidence 457788776533 3468899999754
No 475
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=97.18 E-value=0.0033 Score=66.02 Aligned_cols=95 Identities=24% Similarity=0.353 Sum_probs=60.0
Q ss_pred CCcccccCCCcceEEEEEEeCCEEEEcccccCCC-------CeEEEEEcCCC--------cEEEEEEEEEeCC-------
Q 036586 139 SLPWQRKRQYSSSSSGFIVGGRRVLTNAHSVEHH-------TQVKVKKRGSD--------TKYLATVLSIGTE------- 196 (568)
Q Consensus 139 ~~p~~~~~~~~~~GSGfiI~~G~ILTn~HVV~~~-------~~i~V~~~~dg--------~~~~a~vv~~d~~------- 196 (568)
..||.-.......+.|.+|++.+|||+||.+... ..+.|.+ +.. ..+..+-+..|+.
T Consensus 168 ~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~-G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 246 (399)
T 1gpz_A 168 NFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFL-GHTNVEELMKLGNHPIRRVSVHPDYRQDESY 246 (399)
T ss_dssp SSTTEEEEESSSEEEEEEETTTEEEECGGGTSCTTC-----CCCEEEE-SCSBHHHHHHTCCCCEEEEEECSSCCSSSSS
T ss_pred CCCCEEEECCCCCeEEEEeCCCEEEeChhcccccccccCCcceEEEEe-ccccccccccccccceEEEEECCCCCcCCCC
Confidence 3455432222245899999999999999999743 2456666 221 1233333334443
Q ss_pred ---CCeEEEEeccCc-cccCccceecCCCc---ccCCeEEEEecC
Q 036586 197 ---CDIALLTVKDDE-FWEGVSPVEFGDLP---ALQDAVTVVGYP 234 (568)
Q Consensus 197 ---~DlAlLkv~~~~-~~~~l~~~~l~~~~---~~g~~V~aiG~P 234 (568)
.|||||+++... +...+.|+.|.... ..+..+++.|+-
T Consensus 247 ~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG 291 (399)
T 1gpz_A 247 NFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFG 291 (399)
T ss_dssp CCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC
T ss_pred CCCCcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccC
Confidence 499999998653 23457788786543 346888888874
No 476
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=97.15 E-value=0.011 Score=59.23 Aligned_cols=85 Identities=22% Similarity=0.254 Sum_probs=56.3
Q ss_pred ceEEEEEEeCCEEEEcccccCC--------CCeEEEEEcCC---------CcEEEEEEEEEeC--------CCCeEEEEe
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEH--------HTQVKVKKRGS---------DTKYLATVLSIGT--------ECDIALLTV 204 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~--------~~~i~V~~~~d---------g~~~~a~vv~~d~--------~~DlAlLkv 204 (568)
....|.+|++.+|||+||++.. ...+.|.+-.. ...+..+-+..|| ..|||||++
T Consensus 56 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L 135 (289)
T 2bdy_A 56 LLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKL 135 (289)
T ss_dssp EEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEEEE
T ss_pred EEEEEEEecCCEEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceeeeeEEEEECCCCCCCCCCCCeEEEEEE
Confidence 5699999999999999999842 34577776211 1223333333443 359999999
Q ss_pred ccCc-cccCccceecCCCc------ccCCeEEEEecC
Q 036586 205 KDDE-FWEGVSPVEFGDLP------ALQDAVTVVGYP 234 (568)
Q Consensus 205 ~~~~-~~~~l~~~~l~~~~------~~g~~V~aiG~P 234 (568)
+... +...+.|+.|.... ..+..+.+.|+-
T Consensus 136 ~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG 172 (289)
T 2bdy_A 136 KKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWG 172 (289)
T ss_dssp SSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESS
T ss_pred CCccccCCcccccCCCCccccccccCCCCEEEEECCC
Confidence 8653 22356778886532 246788888864
No 477
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.11 E-value=0.00014 Score=70.56 Aligned_cols=58 Identities=5% Similarity=0.003 Sum_probs=51.7
Q ss_pred eEEEEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeE-EEEEEcCeE
Q 036586 479 IVVVSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFL-KFDLEYQQI 537 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v-~l~v~R~~~ 537 (568)
+++|..|.+++++...|++.||+|++|||++|. +++++.++|+.. +..+ .|.+.|++.
T Consensus 34 gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~-g~~v~~l~V~R~g~ 94 (216)
T 2krg_A 34 GQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLVVDRETD 94 (216)
T ss_dssp SCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH-CSEEEEEECCHHHH
T ss_pred CeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEEEEEECCE
Confidence 588999999988777778899999999999999 999999999987 6778 899988874
No 478
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.11 E-value=0.00021 Score=61.42 Aligned_cols=58 Identities=16% Similarity=0.168 Sum_probs=48.6
Q ss_pred ceEEEEEEeccccccccc-cccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCe
Q 036586 478 QIVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQ 536 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~ 536 (568)
.+++|..|.+++++...+ ++.||+|++|||++|.++ .++..+++. .++.+.|.+.|++
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~~ 99 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKR-AGQSVTIVAQYRP 99 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHS-CCSEEEEEEECCH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCcEEEEEEECc
Confidence 457899999988877777 779999999999999987 777777775 4678999999875
No 479
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.04 E-value=0.00054 Score=76.17 Aligned_cols=61 Identities=10% Similarity=0.061 Sum_probs=53.6
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHcc-CCCeEEEEEEcCeEEE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESS-EDEFLKFDLEYQQIVV 539 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~-~~~~v~l~v~R~~~~~ 539 (568)
.+++|..|.+++++...|++.||+|++|||++| +.++|.++|+.. +++.|.|++.|+|+..
T Consensus 496 ~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 557 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAFRRDELM 557 (597)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEEETTEEE
T ss_pred CeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 468999999999888888889999999999999 689999999874 5779999999988643
No 480
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=97.03 E-value=0.0077 Score=68.99 Aligned_cols=87 Identities=22% Similarity=0.217 Sum_probs=58.3
Q ss_pred cceEEEEEEeCCEEEEcccccCCC---CeEEEEEcC--------CCcEEEEEEEEEeCC-CCeEEEEeccCc-cccCccc
Q 036586 149 SSSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRG--------SDTKYLATVLSIGTE-CDIALLTVKDDE-FWEGVSP 215 (568)
Q Consensus 149 ~~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~--------dg~~~~a~vv~~d~~-~DlAlLkv~~~~-~~~~l~~ 215 (568)
.....|.+|++.+|||+||.+... ..+.|.+.. ....+...-+..++. .|||||+++... +...+.|
T Consensus 585 ~~~CGGSLIs~~wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~hp~~nDIALLkL~~pv~~s~~V~P 664 (791)
T 4dur_A 585 MHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIP 664 (791)
T ss_dssp CEEEEEEEEETTEEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEECTTCCSCEEEEESSCCCCCSSCCC
T ss_pred CeEEEEEEEeCCEEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEECCCCCCceEEEEecCccccCCceee
Confidence 356999999999999999999753 356666621 122344443444544 799999998653 2345677
Q ss_pred eecCCCc---ccCCeEEEEecCC
Q 036586 216 VEFGDLP---ALQDAVTVVGYPI 235 (568)
Q Consensus 216 ~~l~~~~---~~g~~V~aiG~P~ 235 (568)
+.|.... ..+..+++.|+-.
T Consensus 665 IcLP~~~~~~~~g~~~~vsGWG~ 687 (791)
T 4dur_A 665 ACLPSPNYVVADRTECFITGWGE 687 (791)
T ss_dssp CBCCCTTCCCCTTCEEEEEECCC
T ss_pred eeccCcccccCCCCEEEEEEeCC
Confidence 7775432 3468888988753
No 481
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=97.02 E-value=0.038 Score=53.26 Aligned_cols=132 Identities=17% Similarity=0.227 Sum_probs=82.2
Q ss_pred CCEEEEcccccCCC-CeEEEEEcCCCcEEEEE-----EEEEeCCCCeEEEEeccCccccCccceecC---CCcccCCeEE
Q 036586 159 GRRVLTNAHSVEHH-TQVKVKKRGSDTKYLAT-----VLSIGTECDIALLTVKDDEFWEGVSPVEFG---DLPALQDAVT 229 (568)
Q Consensus 159 ~G~ILTn~HVV~~~-~~i~V~~~~dg~~~~a~-----vv~~d~~~DlAlLkv~~~~~~~~l~~~~l~---~~~~~g~~V~ 229 (568)
..+|+||+|..... ..+.|+.. .| .|... =+..=+..||.|+|.+.+ +||++-. ..+..++.|.
T Consensus 46 G~~iItn~HLf~~nnG~L~I~s~-hG-~f~v~nt~~lki~~i~g~DiiiIrmPkD-----fpPf~~~l~FR~P~~~e~V~ 118 (229)
T 1lvm_A 46 GPFIITNKHLFRRNNGTLLVQSL-HG-VFKVKNTTTLQQHLIDGRDMIIIRMPKD-----FPPFPQKLKFREPQREERIC 118 (229)
T ss_dssp TTEEEECGGGGGCCSSEEEEEET-TE-EEEESCGGGSEEEECTTSSCEEEECCTT-----SCCCCSCCCBCCCCTTCEEE
T ss_pred CCEEEeChhhhccCCCcEEEEeC-CC-eEEeCCCCceeeEEeCCccEEEEeCCCc-----CCCcccccccCCCCCCCeEE
Confidence 78999999999865 67888872 33 33221 122336789999999864 5554433 4678889999
Q ss_pred EEecCCCCCCceEEEEEEeee------ecccc---------cCCCceeecc-cceEEEEEeeeecCCCCccccccccch-
Q 036586 230 VVGYPIGGDTISVTSGVVSRM------EILSY---------VHGSTELLGL-QGKCVGIAFQSLKNDDVENIGYVIPTP- 292 (568)
Q Consensus 230 aiG~P~g~~~~svt~GiIs~~------~~~~~---------~~ggspL~n~-~G~VVGI~~~~~~~~~~~~~~~aIP~~- 292 (568)
.||.-+.....+. .||.. ....+ .+-|.||++. +|++|||.+.... ....+|+.|+.
T Consensus 119 lVg~~fq~k~~~s---~vSesS~i~p~~~~~fWkHwIsT~~G~CGlPlVs~~Dg~IVGiHsl~~~---~~~~NyF~~f~~ 192 (229)
T 1lvm_A 119 LVTTNFQTKSMSS---MVSDTSCTFPSSDGIFWKHWIQTKDGQCGSPLVSTRDGFIVGIHSASNF---TNTNNYFTSVPK 192 (229)
T ss_dssp EEEEECSSSSCEE---EECCCEECEEETTTTEEEECBCCCTTCTTCEEEETTTCCEEEEEEEEET---TSCSEEEEECCT
T ss_pred EEEeEeecCCccE---EECCcceeEecCCCCEeEEEeeCCCCcCCCcEEECCCCcEEEEEccccc---CCCeEEEeCCCH
Confidence 9998876433211 22221 11111 1245699875 6999999988542 23456666553
Q ss_pred hhhHhHHHhhh
Q 036586 293 VIIHFIQDYEK 303 (568)
Q Consensus 293 ~i~~~l~~l~~ 303 (568)
.+.++|+....
T Consensus 193 ~f~~~L~~~~~ 203 (229)
T 1lvm_A 193 NFMELLTNQEA 203 (229)
T ss_dssp THHHHHHCGGG
T ss_pred HHHHHHhcccc
Confidence 23377766543
No 482
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=96.98 E-value=0.001 Score=71.47 Aligned_cols=60 Identities=13% Similarity=-0.006 Sum_probs=53.7
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCC--HHHHHHHHHcc-CCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQN--LKSLADMVESS-EDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~-~~~~v~l~v~R~~~ 537 (568)
.|++|+.|.+++++...|++.||+|++|||++|.+ ++++..+|+.. ++..+.|++.|+++
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 46999999999988777788999999999999987 99999999985 57799999999864
No 483
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=96.96 E-value=0.00091 Score=70.40 Aligned_cols=60 Identities=13% Similarity=0.162 Sum_probs=53.3
Q ss_pred ceEEEEEEeccccccccccccCcEEEeeCCEecCCH--HHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIGYEEIVNTQVLALNGKPVQNL--KSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|..|.+++++...|++.||+|++|||++|.++ +++.++|+..++..+.|++.|++.
T Consensus 99 ~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 99 KDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp SCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred CcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 458899999998887778889999999999999996 899999988778899999999876
No 484
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=96.94 E-value=0.0014 Score=53.39 Aligned_cols=51 Identities=10% Similarity=0.246 Sum_probs=43.5
Q ss_pred EEEEeccccccccccccCcEEEeeCCEecC--CHHHHHHHHHccCCCeEEEEEE
Q 036586 482 VSQVLVADINIGYEEIVNTQVLALNGKPVQ--NLKSLADMVESSEDEFLKFDLE 533 (568)
Q Consensus 482 vs~V~~~~~~~g~~~~~gd~I~~VNg~pV~--~l~~f~~~l~~~~~~~v~l~v~ 533 (568)
|..+.+++++...|++.||+|++|||++|. +.+++.++|+ ..+..++|++.
T Consensus 27 I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr-~~g~~V~L~v~ 79 (82)
T 1r6j_A 27 ITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILS-TSGTVVTITIM 79 (82)
T ss_dssp EEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEE
T ss_pred EEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHh-cCCCEEEEEEE
Confidence 678889888877788899999999999995 6789999999 56678888875
No 485
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=96.91 E-value=0.0087 Score=67.82 Aligned_cols=71 Identities=24% Similarity=0.338 Sum_probs=48.7
Q ss_pred cceEEEEEEeCCEEEEcccccCC---CCeEEEEEcCCCcEEEEEEEEEeCC----------------CCeEEEEeccCc-
Q 036586 149 SSSSSGFIVGGRRVLTNAHSVEH---HTQVKVKKRGSDTKYLATVLSIGTE----------------CDIALLTVKDDE- 208 (568)
Q Consensus 149 ~~~GSGfiI~~G~ILTn~HVV~~---~~~i~V~~~~dg~~~~a~vv~~d~~----------------~DlAlLkv~~~~- 208 (568)
.....|.+|++.+|||+||.+.. ...+.|.+......+..+-+..||. +|||||+++...
T Consensus 483 ~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv~ 562 (741)
T 3hrz_D 483 HESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLK 562 (741)
T ss_dssp ---EEEEECSSSEEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTTTGGGTCSCCCTTCCEEEEESSCCC
T ss_pred CCEEEEEEecCCEEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCcccccccccCCccCCcEEEEEECCcCc
Confidence 35689999999999999999974 4568888843455566655556653 499999998653
Q ss_pred cccCccceecC
Q 036586 209 FWEGVSPVEFG 219 (568)
Q Consensus 209 ~~~~l~~~~l~ 219 (568)
+...+.|+.|.
T Consensus 563 ~s~~v~picLp 573 (741)
T 3hrz_D 563 YGQTIRPICLP 573 (741)
T ss_dssp CCSSCCCCBCT
T ss_pred CCCCccccccC
Confidence 22356666665
No 486
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=96.89 E-value=0.021 Score=60.34 Aligned_cols=85 Identities=20% Similarity=0.218 Sum_probs=58.1
Q ss_pred ceEEEEEEeCCEEEEcccccCCC--CeEEEEEcCCC---------------------cEEEEEEEEEeCC-------CCe
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH--TQVKVKKRGSD---------------------TKYLATVLSIGTE-------CDI 199 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~--~~i~V~~~~dg---------------------~~~~a~vv~~d~~-------~Dl 199 (568)
....|.+|++.+|||+||.+.+. ..+.|.+- .. ..+..+-+..|+. .||
T Consensus 146 ~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~lG-~~~~~~~~~~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~~nDI 224 (408)
T 2xxl_A 146 FLCGGAMISERYILTAAHCVHGLQNDLYEIRLG-EHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDI 224 (408)
T ss_dssp EEEEEEEEETTEEEECGGGTTTCTTTEEEEEES-CSBTTCSCCEEEETTEEEECCCCEEEEEEEEEECTTCBTTTTBSCC
T ss_pred EEEEEEEEECCEEEEcHHhcCCCCCceEEEEee-eeECCCccchhhcccccccCCceEEEeEEEEEeCCCCCccccccce
Confidence 56899999999999999999754 46777762 21 1233333344543 599
Q ss_pred EEEEeccCc-cccCccceecCCCc------ccCCeEEEEecCC
Q 036586 200 ALLTVKDDE-FWEGVSPVEFGDLP------ALQDAVTVVGYPI 235 (568)
Q Consensus 200 AlLkv~~~~-~~~~l~~~~l~~~~------~~g~~V~aiG~P~ 235 (568)
|||+++... +...+.|+.|.... ..+..+++.|+-.
T Consensus 225 ALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~ 267 (408)
T 2xxl_A 225 ALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGT 267 (408)
T ss_dssp EEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCC
T ss_pred EEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCc
Confidence 999998653 23457788776532 3468888888753
No 487
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=95.92 E-value=0.00016 Score=62.60 Aligned_cols=55 Identities=16% Similarity=0.241 Sum_probs=44.8
Q ss_pred ceEEEEEEeccccccc-cccccCcEEEeeCCEec--CCHHHHHHHHHccCCCeEEEEEE
Q 036586 478 QIVVVSQVLVADINIG-YEEIVNTQVLALNGKPV--QNLKSLADMVESSEDEFLKFDLE 533 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g-~~~~~gd~I~~VNg~pV--~~l~~f~~~l~~~~~~~v~l~v~ 533 (568)
.+++|+.|.+++++.. .+++.||+|++|||++| .+++++.++++...+. +.|++.
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~~~-v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQRGE-IEFEVV 110 (112)
Confidence 3588999999988777 77889999999999999 5688999999876543 666654
No 488
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=96.87 E-value=0.012 Score=60.82 Aligned_cols=85 Identities=16% Similarity=0.205 Sum_probs=58.9
Q ss_pred ceEEEEEEeCCEEEEcccccCCCC-----------eEEEEEcCCCcEEEEEEEEEeCC---CCeEEEEeccCc-cccCcc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHT-----------QVKVKKRGSDTKYLATVLSIGTE---CDIALLTVKDDE-FWEGVS 214 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~-----------~i~V~~~~dg~~~~a~vv~~d~~---~DlAlLkv~~~~-~~~~l~ 214 (568)
....|.+|++.+|||+||.+.... .+.+.. .....+..+=+..||. .|||||+++... +...+.
T Consensus 126 ~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~V~~i~~HP~y~~nDIALlkL~~~v~~~~~v~ 204 (347)
T 4f4o_C 126 LTSGATLINEQWLLTTAKNLRLGHKNDTKAKDIAPTLRLYV-GKKQEVEIEKVIFHPDNSTVDIGLIKLKQKVPVNERVM 204 (347)
T ss_dssp CEEECCBCSSSEEEECHHHHTTTSCTTCCHHHHGGGCEEEE-TTTEEECEEEEEECSCTTTCCCEEEEESSCCCCSSSCC
T ss_pred EEEEEEEEcCCEEEeCcccccCCCCCcceEEeeeeeeeecC-CCeEEEEEEEEEECcCCCCCCEEEEEECCCccCCCcee
Confidence 468999999999999999986321 234444 3555666655556765 599999998653 334677
Q ss_pred ceecCCCc--ccCCeEEEEecCC
Q 036586 215 PVEFGDLP--ALQDAVTVVGYPI 235 (568)
Q Consensus 215 ~~~l~~~~--~~g~~V~aiG~P~ 235 (568)
|+.|.... ..+...++.|+-.
T Consensus 205 PicLp~~~~~~~g~~~~v~GWG~ 227 (347)
T 4f4o_C 205 PICLPSKDYVNVGLVGYVSGWGR 227 (347)
T ss_dssp CCBCCSSCCCCTTCEEEEEECSB
T ss_pred eeecCccccCCCCcEEEEecccc
Confidence 77776433 4567888888643
No 489
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=96.80 E-value=0.0011 Score=65.93 Aligned_cols=59 Identities=10% Similarity=0.218 Sum_probs=51.0
Q ss_pred ceEEEEEEeccccccc-cccccCcEEEeeCCEecCC--HHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 478 QIVVVSQVLVADINIG-YEEIVNTQVLALNGKPVQN--LKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 478 ~gvvvs~V~~~~~~~g-~~~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
.+++|+.|.+++++.. .+++.||+|++|||++|.+ +++++.+|+.. ++.+.|++.|.+.
T Consensus 103 ~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~~-g~~V~L~V~R~~~ 164 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-GKEVVLEVKYMKE 164 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHHC-CSCCCEEEECCSS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhcC-CCeEEEEEEeCcc
Confidence 4699999999988777 6788999999999999998 68999999987 5679999998654
No 490
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=96.71 E-value=0.0097 Score=66.49 Aligned_cols=85 Identities=20% Similarity=0.264 Sum_probs=57.6
Q ss_pred ceEEEEEEeCCEEEEcccccCCC---CeEEEEEcC--------CCcEEEEEEEEEeCC-------CCeEEEEeccCc-cc
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH---TQVKVKKRG--------SDTKYLATVLSIGTE-------CDIALLTVKDDE-FW 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~---~~i~V~~~~--------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~-~~ 210 (568)
....|.+|++.+|||+||.+.+. ..+.|.+.. +...+..+-+..||. .|||||+++... +.
T Consensus 414 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~~~ 493 (625)
T 2f83_A 414 HLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNYT 493 (625)
T ss_dssp EEEEEEECSSSEEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCCCB
T ss_pred EEEEEEEECCCEEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEEEEECCccCcCCccccEEEEEECCcccCC
Confidence 56899999999999999999753 346676521 122344444455654 599999998653 22
Q ss_pred cCccceecCCCc---ccCCeEEEEecC
Q 036586 211 EGVSPVEFGDLP---ALQDAVTVVGYP 234 (568)
Q Consensus 211 ~~l~~~~l~~~~---~~g~~V~aiG~P 234 (568)
..+.|+.|.... ..+..+++.|+-
T Consensus 494 ~~v~PicLp~~~~~~~~~~~~~v~GWG 520 (625)
T 2f83_A 494 DSQRPICLPSKGDRNVIYTDCWVTGWG 520 (625)
T ss_dssp TTBCCCBCCCGGGTTCCCCCEEECBCC
T ss_pred CceeeeEcCCccCCccCCCEEEEEEec
Confidence 356777776533 346788888864
No 491
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=96.54 E-value=0.0083 Score=63.73 Aligned_cols=85 Identities=22% Similarity=0.261 Sum_probs=56.2
Q ss_pred ceEEEEEEeCCEEEEcccccC--------CCCeEEEEEcCC---------CcEEEEEEEEEeC--------CCCeEEEEe
Q 036586 150 SSSSGFIVGGRRVLTNAHSVE--------HHTQVKVKKRGS---------DTKYLATVLSIGT--------ECDIALLTV 204 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~--------~~~~i~V~~~~d---------g~~~~a~vv~~d~--------~~DlAlLkv 204 (568)
....|.+|++.+|||+||.+. ....+.|.+... ...+..+-+..|+ ..|||||++
T Consensus 191 ~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~~nDIALLkL 270 (424)
T 3nxp_A 191 LLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKL 270 (424)
T ss_dssp EEEEEEESSSSEEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEECEEEEEECTTCBTTTTSBTCCEEEEE
T ss_pred ccceeEEEcCCEEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEEEEEEEEeCCCCCCCCCCcCCeEEEEe
Confidence 468999999999999999984 234677776211 1122233334444 359999999
Q ss_pred ccCc-cccCccceecCCCc------ccCCeEEEEecC
Q 036586 205 KDDE-FWEGVSPVEFGDLP------ALQDAVTVVGYP 234 (568)
Q Consensus 205 ~~~~-~~~~l~~~~l~~~~------~~g~~V~aiG~P 234 (568)
+... +...+.|+.|.... ..+..+.+.|+-
T Consensus 271 ~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG 307 (424)
T 3nxp_A 271 KKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWG 307 (424)
T ss_dssp SSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESS
T ss_pred cCccccCCcccccCCCCcccccccccCCCeEEEEecC
Confidence 8653 23456777776532 246888888874
No 492
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=96.27 E-value=0.0015 Score=69.03 Aligned_cols=56 Identities=9% Similarity=0.119 Sum_probs=49.8
Q ss_pred EEEEEEeccccccccccccCcEEEeeCCEecCCHHHHHHHHHccCCCeEEEEEEcCeE
Q 036586 480 VVVSQVLVADINIGYEEIVNTQVLALNGKPVQNLKSLADMVESSEDEFLKFDLEYQQI 537 (568)
Q Consensus 480 vvvs~V~~~~~~~g~~~~~gd~I~~VNg~pV~~l~~f~~~l~~~~~~~v~l~v~R~~~ 537 (568)
++|..|.+++++...|+++||+|++|||++|.+++ +.++|+. ++..++|++.|++.
T Consensus 92 ~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~~~l~~-~g~~v~l~v~R~g~ 147 (403)
T 3k50_A 92 ALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ESELLQG-STRQLQIGVYKEVV 147 (403)
T ss_dssp EEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GGGGTSC-SCEEEEEEEEEEEC
T ss_pred EEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-HHHHhhC-CCCEEEEEEEeCCc
Confidence 78999999999888888899999999999999996 7788877 77899999999764
No 493
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=96.00 E-value=0.055 Score=59.59 Aligned_cols=85 Identities=21% Similarity=0.234 Sum_probs=52.0
Q ss_pred ceEEEEEEeCCEEEEcccccCCC--CeEEEEEcC---------CCcEEEEEEEEEeCC-------CCeEEEEeccCccc-
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHH--TQVKVKKRG---------SDTKYLATVLSIGTE-------CDIALLTVKDDEFW- 210 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~--~~i~V~~~~---------dg~~~~a~vv~~d~~-------~DlAlLkv~~~~~~- 210 (568)
....|.+|++.+|||+||.+.+. ..+.|.+.. ....+..+-+..||. .|||||+++....+
T Consensus 345 ~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~Hp~Y~~~~~~nDIALlkL~~~v~~~ 424 (565)
T 2xrc_A 345 ITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNKK 424 (565)
T ss_dssp CCCCCEEEETTEEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEECTTCCTTTCTTCCEEEEECCCSSSS
T ss_pred eeeeEEEEeCCEEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEeCCCCCCCcccccceeeeeccccccc
Confidence 46889999999999999999753 345554310 122334443445554 59999999865311
Q ss_pred ----cCccceecCCCc---ccCCeEEEEecC
Q 036586 211 ----EGVSPVEFGDLP---ALQDAVTVVGYP 234 (568)
Q Consensus 211 ----~~l~~~~l~~~~---~~g~~V~aiG~P 234 (568)
..+.|+-|.... ..++.+++.|+-
T Consensus 425 ~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG 455 (565)
T 2xrc_A 425 DCELPRSIPACVPWSPYLFQPNDTCIVSGWG 455 (565)
T ss_dssp CSCCTTCCCCBCCSCTTSSCTTCEEEEEC--
T ss_pred cccccceeeeecCCcccccCCCCEEEEEeCc
Confidence 124565554322 346888888874
No 494
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=95.88 E-value=0.019 Score=47.93 Aligned_cols=55 Identities=11% Similarity=0.182 Sum_probs=44.5
Q ss_pred EEEEEEeccccccccc-cccCcEEEeeCCEecCC--HHHHHHHHHccCCC-eEEEEEEc
Q 036586 480 VVVSQVLVADINIGYE-EIVNTQVLALNGKPVQN--LKSLADMVESSEDE-FLKFDLEY 534 (568)
Q Consensus 480 vvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~--l~~f~~~l~~~~~~-~v~l~v~R 534 (568)
.+|+.+.+++++...+ +..||.|++|||+.|.. .++++++|++.+.+ +++|++.+
T Consensus 30 ~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 30 AFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp CEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred EEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEEC
Confidence 6799999987654443 56899999999999974 57999999998754 78887754
No 495
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=95.85 E-value=0.18 Score=48.27 Aligned_cols=80 Identities=14% Similarity=0.096 Sum_probs=54.7
Q ss_pred HHHHHHhCCCCCceEEEEeEeecCCCCCcccccCCCcceEEEEEEeCCEEEEcccccCCCC-----eEEEEEcCCCcEEE
Q 036586 113 ESVAVKAVPSMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVGGRRVLTNAHSVEHHT-----QVKVKKRGSDTKYL 187 (568)
Q Consensus 113 ~~~~~~v~p~~~sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~G~ILTn~HVV~~~~-----~i~V~~~~dg~~~~ 187 (568)
.++...+.+ ..|.|....... ......+|+.|.+..+|..+|...... .-.+.. +|..|.
T Consensus 3 ~~i~~~v~~---N~~~i~~~~~~~----------~~~~~~t~LgI~~r~~lvP~H~~~~~~~~~~~~~~i~i--~g~~~~ 67 (212)
T 2hal_A 3 LEIAGLVRK---NLVQFGVGEKNG----------SVRWVMNALGVKDDWLLVPSHAYKFEKDYEMMEFYFNR--GGTYYS 67 (212)
T ss_dssp HHHHHHHHH---HEEEEEEEETTS----------CCEEEEEEEEEEBTEEEEEGGGTTTSTTGGGEEEEEEE--TTEEEE
T ss_pred eeehhhhhc---cEEEEEEeCCCC----------CcceEEEEEEEcCCEEEEecccCcccccccccceEEEE--CCEEEe
Confidence 466677777 899998875322 122468999999999999999976322 224555 677665
Q ss_pred EE-----EEEEe-CCCCeEEEEeccC
Q 036586 188 AT-----VLSIG-TECDIALLTVKDD 207 (568)
Q Consensus 188 a~-----vv~~d-~~~DlAlLkv~~~ 207 (568)
.. +.-.| ...||++++++..
T Consensus 68 ~~~~~v~~~~~d~~~~Dl~lv~Lp~~ 93 (212)
T 2hal_A 68 ISAGNVVIQSLDVGFQDVVLMKVPTI 93 (212)
T ss_dssp EEGGGSEEECSSSSCCSEEEEECTTS
T ss_pred eccccceeEeccCCCceEEEEECCCC
Confidence 43 32333 4689999999764
No 496
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=95.83 E-value=0.29 Score=45.82 Aligned_cols=139 Identities=15% Similarity=0.133 Sum_probs=80.5
Q ss_pred ceEEEEeEeecCCCCCcccccCCCcceEEEEEEeCCEEEEcccccCCCCeEEEEEcCCCcEEEEE-EEEE-e---CCCCe
Q 036586 125 AVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGSDTKYLAT-VLSI-G---TECDI 199 (568)
Q Consensus 125 sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~dg~~~~a~-vv~~-d---~~~Dl 199 (568)
.++.|.+.. +.-||+-|-+...|-+.|...+ +. |.+ +|++++.. ..-. | ...||
T Consensus 18 N~~~vtt~~----------------g~ft~LgI~dr~~vvP~Ha~~~-~~--i~i--~g~~~~v~d~~~L~~~~g~~~El 76 (187)
T 3qzr_A 18 NVRQVQTDQ----------------GHFTMLGVRDRLAVLPRHSQPG-KT--IWI--EHKLVNVLDAVELVDEQGVNLAL 76 (187)
T ss_dssp HEEEEEETT----------------EEEEEEEEEBTEEEEEGGGCCC-SE--EEE--TTEEEEEEEEEECCCTTCCCCSE
T ss_pred CeEEEEECC----------------CeEEEEEEeeeEEEEeCCCCCC-CE--EEE--CCEEEEeeeeEEEECCCCCEEEE
Confidence 788887733 3458999999999999999443 33 555 67776541 1111 2 24699
Q ss_pred EEEEeccCccccCccceecCCCcccCCeEEEEecCCCCCCceEEEEEEeeeecc-----------ccc------CCCcee
Q 036586 200 ALLTVKDDEFWEGVSPVEFGDLPALQDAVTVVGYPIGGDTISVTSGVVSRMEIL-----------SYV------HGSTEL 262 (568)
Q Consensus 200 AlLkv~~~~~~~~l~~~~l~~~~~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~-----------~~~------~ggspL 262 (568)
++|+++..+-+.++... |.+.......+..+-+.......-+..|-+...... .|. .-||+|
T Consensus 77 t~v~l~~~~kfRDIrkf-i~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~inlsg~~t~r~l~Y~~pTk~G~CGgvl 155 (187)
T 3qzr_A 77 TLITLDTNEKFRDITKF-IPENISTASDATLVINTEHMPSMFVPVGDVVQYGFLNLSGKPTHRTMMYNFPTKAGQCGGVV 155 (187)
T ss_dssp EEEEECSSCCBCCCGGG-SCSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEEEEETTEEEEEEEEESSCCCTTCTTCEE
T ss_pred EEEEcCCCccccchHHh-CccCcCCCCceEEEEEcCCCcceEEEeccEEEeceEeCCCCccccEEEECCCCCCCccCCeE
Confidence 99999865433344432 222222222344444443333323444555443211 111 246788
Q ss_pred ecccceEEEEEeeeecCCCCccccccccc
Q 036586 263 LGLQGKCVGIAFQSLKNDDVENIGYVIPT 291 (568)
Q Consensus 263 ~n~~G~VVGI~~~~~~~~~~~~~~~aIP~ 291 (568)
+. .|+++||..++ +...+|+.++
T Consensus 156 ~~-~gkIiGIHvaG-----nG~~G~~a~L 178 (187)
T 3qzr_A 156 TS-VGKIIGIHIGG-----NGRQGFCAGL 178 (187)
T ss_dssp EE-TTEEEEEEEEE-----CSSCEEEEEC
T ss_pred Ee-cCcEEEEEECC-----CCCcEEEEEe
Confidence 86 89999999994 3456676655
No 497
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=95.77 E-value=0.0026 Score=66.95 Aligned_cols=59 Identities=10% Similarity=0.222 Sum_probs=50.6
Q ss_pred eEEEEEEeccccccccc-cccCcEEEeeCCEecCCH--HHHHHHHHccC-CCeEEEEEEcCeE
Q 036586 479 IVVVSQVLVADINIGYE-EIVNTQVLALNGKPVQNL--KSLADMVESSE-DEFLKFDLEYQQI 537 (568)
Q Consensus 479 gvvvs~V~~~~~~~g~~-~~~gd~I~~VNg~pV~~l--~~f~~~l~~~~-~~~v~l~v~R~~~ 537 (568)
+++|..|.+++++...| ++.||+|++|||++|.+| +++..+|+..+ +..+.|++.|++.
T Consensus 233 g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~ 295 (388)
T 3suz_A 233 TVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPP 295 (388)
T ss_dssp CCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCS
T ss_pred CEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccccc
Confidence 47889999998887777 889999999999999999 78999998874 4579999998753
No 498
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=95.69 E-value=0.022 Score=58.14 Aligned_cols=85 Identities=25% Similarity=0.219 Sum_probs=53.5
Q ss_pred eEEEEEEeCCEEEEcccccCCCCeEEEEEcC------CCcEEEE---EEEEEeC--------------CCCeEEEEeccC
Q 036586 151 SSSGFIVGGRRVLTNAHSVEHHTQVKVKKRG------SDTKYLA---TVLSIGT--------------ECDIALLTVKDD 207 (568)
Q Consensus 151 ~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~------dg~~~~a---~vv~~d~--------------~~DlAlLkv~~~ 207 (568)
...|.+|++.+|||+||.+.+.....|.+.. +...+.. +-+..|+ ..|||||+++..
T Consensus 104 ~CgGsLIs~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~~ 183 (333)
T 1elv_A 104 WAGGALINEYWVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKDP 183 (333)
T ss_dssp EEEEEEEETTEEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESSC
T ss_pred ceeEEEecCCEEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCCcccccccccCCCcceEEEEEeCCC
Confidence 5889999999999999999865444444411 1111222 2233332 369999999865
Q ss_pred c-cccCccceecCCCc-----ccCCeEEEEecCC
Q 036586 208 E-FWEGVSPVEFGDLP-----ALQDAVTVVGYPI 235 (568)
Q Consensus 208 ~-~~~~l~~~~l~~~~-----~~g~~V~aiG~P~ 235 (568)
. +...+.|+.|.... ..++.+++.|+-.
T Consensus 184 v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~ 217 (333)
T 1elv_A 184 VKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGR 217 (333)
T ss_dssp CCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCC
T ss_pred CcCCCcccceecCCCcccccccCCcEEEEEECcC
Confidence 3 23456777776432 2368899999743
No 499
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=95.35 E-value=0.44 Score=44.79 Aligned_cols=128 Identities=16% Similarity=0.177 Sum_probs=70.2
Q ss_pred ceEEEEEEeCCEEEEcccccCCCCeEEEEEcCCCcEE---EEEEEEEeC---CCCeEEEEeccCccccCccceecCCC-c
Q 036586 150 SSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGSDTKY---LATVLSIGT---ECDIALLTVKDDEFWEGVSPVEFGDL-P 222 (568)
Q Consensus 150 ~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~dg~~~---~a~vv~~d~---~~DlAlLkv~~~~~~~~l~~~~l~~~-~ 222 (568)
+.-||+.|-+.++|.++|...+. .+.+ +|..+ ++..+ .|. ..||++++++..+-+.++... |.+. +
T Consensus 23 G~ft~LgI~dr~~lvP~Ha~~~~---ti~i--~g~~~~v~d~~~l-~~~~~~~~Dlt~v~l~~~~kFRDIr~~-~~~~~~ 95 (190)
T 3zve_A 23 GEFTMLGVHDRVAVIPTHASVGE---TIYI--NDVETKVLDACAL-RDLTDTNLEITIVKLDRNQKFRDIRHF-LPRYED 95 (190)
T ss_dssp EEEEEEEEEBTEEEEEGGGCCCS---EEEE--TTEEEEEEEEEEE-ECTTCCEEEEEEEEECCSSCBCCCGGG-SCSSCC
T ss_pred EEEEEEEEeCCEEEEecCCCCCc---EEEE--CCEEEEeeEEEEE-EcCCCCeEEEEEEEcCCCcccCchHHh-ccccCC
Confidence 34678889999999999976532 3444 44443 22222 233 359999999865423344332 2222 2
Q ss_pred ccCCeEEEEecCCCCCCceEEEEEEeeeecc-----------ccc------CCCceeecccceEEEEEeeeecCCCCccc
Q 036586 223 ALQDAVTVVGYPIGGDTISVTSGVVSRMEIL-----------SYV------HGSTELLGLQGKCVGIAFQSLKNDDVENI 285 (568)
Q Consensus 223 ~~g~~V~aiG~P~g~~~~svt~GiIs~~~~~-----------~~~------~ggspL~n~~G~VVGI~~~~~~~~~~~~~ 285 (568)
...+.++++-.+.. ...-+..|.+...+.. .|. .-||+|+. +|+++||..++ +...
T Consensus 96 ~~~~~~l~i~s~~~-~~~~~~v~~v~~~~~i~l~g~~~~~~~~Y~~pT~~G~CG~~li~-~gkI~GiHvaG-----~G~~ 168 (190)
T 3zve_A 96 DYNDAVLSVHTSKF-PNMYIPVGQVTNYGFLNLGGTPTHRILMYNFPTRAGQCGGVVTT-TGKVIGIHVGG-----NGAQ 168 (190)
T ss_dssp CEEEEEEEECSSSC-SSEEEEEEEEEEEEEEEETTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEEEE-----CSSC
T ss_pred CCCCeEEEEECCCC-cceEEecccceEeceeecCCCeeeeeEEEecCCCCCccCCeEEE-CCCEEEEEECc-----CCCc
Confidence 23344555544433 2212334444333211 111 24678885 79999999994 2345
Q ss_pred cccccc
Q 036586 286 GYVIPT 291 (568)
Q Consensus 286 ~~aIP~ 291 (568)
+||-++
T Consensus 169 g~~~~l 174 (190)
T 3zve_A 169 GFAAML 174 (190)
T ss_dssp EEEEEC
T ss_pred eEehhh
Confidence 666544
No 500
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=95.30 E-value=0.4 Score=44.87 Aligned_cols=138 Identities=14% Similarity=0.160 Sum_probs=78.0
Q ss_pred ceEEEEeEeecCCCCCcccccCCCcceEEEEEEeCCEEEEcccccCCCCeEEEEEcCCCcEEEE-EEEE-EeC---CCCe
Q 036586 125 AVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFIVGGRRVLTNAHSVEHHTQVKVKKRGSDTKYLA-TVLS-IGT---ECDI 199 (568)
Q Consensus 125 sVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~G~ILTn~HVV~~~~~i~V~~~~dg~~~~a-~vv~-~d~---~~Dl 199 (568)
.++.|.+.. +.-||+-|-+...|-+.|.-.+ +. |.+ +|++++. .... .|. ..||
T Consensus 16 N~~~vtT~~----------------G~ft~LgI~dr~~vvPtHa~~~-~~--i~i--~G~~~~v~d~~~L~~~~g~~lEl 74 (191)
T 3q3y_A 16 NASTVKTEY----------------GEFTMLGIYDRWAVLPRHAKPG-PT--ILM--NDQEVGVLDAKELVDKDGTNLEL 74 (191)
T ss_dssp HEEEEEETT----------------EEEEEEEEEBTEEEEEGGGCCC-SE--EEE--TTEEEEEEEEEEEECTTCCEEEE
T ss_pred CeEEEEECC----------------CcEEEEEEeceEEEEECCCCCC-CE--EEE--CCEEEEeeeEEEEEcCCCCEEEE
Confidence 788887633 3458888889999999999443 33 555 7777764 1111 133 3599
Q ss_pred EEEEeccCccccCccceecCCCcccC-CeEEEEecCCCCCCceEEEEEEeeeecc-----------ccc------CCCce
Q 036586 200 ALLTVKDDEFWEGVSPVEFGDLPALQ-DAVTVVGYPIGGDTISVTSGVVSRMEIL-----------SYV------HGSTE 261 (568)
Q Consensus 200 AlLkv~~~~~~~~l~~~~l~~~~~~g-~~V~aiG~P~g~~~~svt~GiIs~~~~~-----------~~~------~ggsp 261 (568)
++|+++..+-+.++.-. +.+..... +-++++ +........+..|-+...+.. .|. .-||+
T Consensus 75 t~v~l~~~~kFRDIrkf-i~~~~~~~~~~~Lv~-ns~~~p~~~~~vG~v~~~g~inlsg~~t~r~l~Y~~pTk~G~CGgv 152 (191)
T 3q3y_A 75 TLLKLNRNEKFRDIRGF-LAREEVEVNEAVLAI-NTSKFPNMYIPVGQVTDYGFLNLGGTPTKRMLVYNFPTRAGQCGGV 152 (191)
T ss_dssp EEEEEECSSCBCCCGGG-BCSSCCCEEEEEEEE-CSSSSTTEEEEEEEEEEEEEEEETTEEEEEEEEEESCCCTTCTTCE
T ss_pred EEEECCCCccccchHHh-cccccccCCceEEEE-EcCCCcceEEEeccEEEcceEeCCCCcccCEEEecCCCCCCccCCE
Confidence 99999875422334331 22332332 334444 333333223444555442111 111 24678
Q ss_pred eecccceEEEEEeeeecCCCCccccccccc
Q 036586 262 LLGLQGKCVGIAFQSLKNDDVENIGYVIPT 291 (568)
Q Consensus 262 L~n~~G~VVGI~~~~~~~~~~~~~~~aIP~ 291 (568)
|+. .|++|||..++ +...+|+.++
T Consensus 153 L~~-~gkIiGIHvgG-----nG~~Gfaa~L 176 (191)
T 3q3y_A 153 LMS-TGKVLGIHVGG-----NGHQGFSAAL 176 (191)
T ss_dssp EEE-TTEEEEEEEEE-----ETTEEEEEEC
T ss_pred EEe-CCCEEEEEECC-----CCcceEEeeh
Confidence 876 79999999984 3445665544
Done!